BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780870|ref|YP_003065283.1| prolyl-tRNA synthetase [Candidatus Liberibacter asiaticus str. psy62] (449 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|227821637|ref|YP_002825607.1| prolyl-tRNA synthetase [Sinorhizobium fredii NGR234] gi|227340636|gb|ACP24854.1| prolyl-tRNA synthetase [Sinorhizobium fredii NGR234] Length = 501 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 279/438 (63%), Positives = 354/438 (80%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+PIL+ENP++AEI SH+LMLRTGMI Q S GIYSWLPLG++ LD VNAIIREE Sbjct: 60 MRLSRYFMPILKENPKEAEIVSHRLMLRTGMIRQQSAGIYSWLPLGKRVLDKVNAIIREE 119 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR+GA+E+ +PTLQSA+LW ESGRYD+YGKEMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 120 QNRSGAVELLMPTLQSAELWQESGRYDAYGKEMLRIKDRQDRPMLYGPTNEEMITDIFRS 179 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYRNLP Y IQLKFRDE+RPRFG MRSREFLMKDAYSFDL EG++H+YNKMF + Sbjct: 180 SVKSYRNLPLNLYHIQLKFRDEIRPRFGTMRSREFLMKDAYSFDLDREGAEHAYNKMFAA 239 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGG+LSHEFI+LADTGE++V+C KDF+ F IP ++T+FD Sbjct: 240 YLRTFDRMGLRAIPMRADTGPIGGNLSHEFIILADTGESEVYCHKDFLGFDIPGKDTNFD 299 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ L +I ++WT+ YAATS++H+E FD++ E ++VSARGIEVGHIFYFGTKYS M A Sbjct: 300 DVAGLKAIFDKWTSRYAATSEMHDEAAFDAISEGEKVSARGIEVGHIFYFGTKYSEAMGA 359 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK+H V MGSYGIG R+V A+IE+SHD GIIWP SVAPF +IN+K D Sbjct: 360 KVLGPDGKEHIVHMGSYGIGPTRLVPAIIEASHDENGIIWPKSVAPFDAVVINMKTGDAA 419 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C AC +Y+ L K G DV DD ++ G++FA ADL+G P+Q+IVG + +++ +VE+K Sbjct: 420 CDAACGTLYSDLGKAGFDVLLDDTDDRAGAKFATADLIGVPVQIIVGPRSIANGEVEVKD 479 Query: 421 RLTGIREDMSLEEVINYA 438 R TG RE M++E IN Sbjct: 480 RKTGERETMTVEAAINKL 497 >gi|254780870|ref|YP_003065283.1| prolyl-tRNA synthetase [Candidatus Liberibacter asiaticus str. psy62] gi|254040547|gb|ACT57343.1| prolyl-tRNA synthetase [Candidatus Liberibacter asiaticus str. psy62] Length = 449 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 449/449 (100%), Positives = 449/449 (100%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE Sbjct: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS Sbjct: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS Sbjct: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD Sbjct: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA Sbjct: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV Sbjct: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH Sbjct: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 Query: 421 RLTGIREDMSLEEVINYASHRFSNNRPVL 449 RLTGIREDMSLEEVINYASHRFSNNRPVL Sbjct: 421 RLTGIREDMSLEEVINYASHRFSNNRPVL 449 >gi|222085595|ref|YP_002544125.1| prolyl-tRNA synthetase protein [Agrobacterium radiobacter K84] gi|221723043|gb|ACM26199.1| prolyl-tRNA synthetase protein [Agrobacterium radiobacter K84] Length = 475 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 286/439 (65%), Positives = 363/439 (82%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+PIL+ENP++AEI SH+LMLR GMI Q S+GIYSWLPLG++ LD VN IIREE Sbjct: 36 MRLSRYFMPILKENPKEAEIVSHRLMLRAGMIRQQSQGIYSWLPLGKRVLDKVNKIIREE 95 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR+GAIE+S+PTLQSA+LW ESGRYD+YGKEMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 96 QNRSGAIELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQDRPMLYGPTNEEMITDIFRS 155 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQLKFRDE+RPRFG MRSREF+MKDAYSFDLT EG+ +YNKMF + Sbjct: 156 SVKSYKDLPLNLYHIQLKFRDEIRPRFGTMRSREFMMKDAYSFDLTQEGAVIAYNKMFAA 215 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGG+LSHEFI+LADTGE++VFC KDF++F IPSE+T+FD Sbjct: 216 YLRTFDRLGLRAIPMRADTGPIGGELSHEFIILADTGESEVFCHKDFVNFDIPSEDTNFD 275 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ L I ++WT+ YAATS++H+E F+++PE +R+SARGIEVGHIFYFGTKYS PM A Sbjct: 276 DVAGLKGIFDKWTSLYAATSEMHDEATFNAIPEGERLSARGIEVGHIFYFGTKYSEPMGA 335 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+V A+IE+SHD GIIWP SVAPF + +IN+K+ DQ Sbjct: 336 KVQGPDGKEHAVHMGSYGIGPTRLVPAIIEASHDENGIIWPASVAPFDVVVINMKSGDQA 395 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACE IYA LSK G DV +DD ++ G++FA ADL+G P+Q+IVG + ++ +VE+K Sbjct: 396 CDAACETIYAALSKAGKDVLFDDRDDRAGTKFATADLIGVPVQIIVGPRSIAGGEVEVKD 455 Query: 421 RLTGIREDMSLEEVINYAS 439 R TG RE M++E IN + Sbjct: 456 RKTGARETMTVEAAINKLA 474 >gi|222148295|ref|YP_002549252.1| prolyl-tRNA synthetase [Agrobacterium vitis S4] gi|221735283|gb|ACM36246.1| prolyl-tRNA synthetase [Agrobacterium vitis S4] Length = 498 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 281/439 (64%), Positives = 356/439 (81%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLRTGMI Q S+GIYSWLPLG++ LD VNAIIR+E Sbjct: 59 MRLSRYFLPILKENPKEAEIVSHRLMLRTGMIRQQSQGIYSWLPLGKRVLDKVNAIIRQE 118 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA+E+ +PTLQSA+LW ESGRYD YGKEMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 119 QNRAGAVELLMPTLQSAELWQESGRYDDYGKEMLRIKDRQDRPMLYGPTNEEMITDIFRS 178 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY++LP Y IQLKFRDE+RPRFG MRSREFLMKDAYSFDLT E + HSYNKMF + Sbjct: 179 YVKSYKSLPLNLYHIQLKFRDEIRPRFGTMRSREFLMKDAYSFDLTKESAIHSYNKMFAA 238 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGG+ SHEFI+LADTGE++VFC K F+D IPS +TDFD Sbjct: 239 YLRTFDRLGLRAIPMRADTGPIGGNHSHEFIILADTGESEVFCHKSFLDRAIPSADTDFD 298 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ L +I + WT+ YAATS++H+E + ++P++ ++SARGIEVGHIFYFGTKYS PM A Sbjct: 299 DVAGLQAIFDDWTSHYAATSEMHDEAAYGAMPDDAKISARGIEVGHIFYFGTKYSEPMGA 358 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+V A+IE+SHD GIIWP SVAPF +IN+KA D Sbjct: 359 KVQGPDGKEHLVHMGSYGIGPTRLVPAIIEASHDENGIIWPASVAPFDAIIINMKAGDAG 418 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C AC+ +Y L+K G DV DD ++ G++FA+ADL+G P QVIVG + V++ +VE+K+ Sbjct: 419 CDGACDTVYGALTKAGKDVLLDDTDDRAGAKFALADLIGVPYQVIVGPRSVANGEVELKN 478 Query: 421 RLTGIREDMSLEEVINYAS 439 R TG RE M++E IN + Sbjct: 479 RKTGERETMTIEAAINRLA 497 >gi|15965039|ref|NP_385392.1| prolyl-tRNA synthetase [Sinorhizobium meliloti 1021] gi|307301111|ref|ZP_07580880.1| prolyl-tRNA synthetase [Sinorhizobium meliloti BL225C] gi|307317844|ref|ZP_07597282.1| prolyl-tRNA synthetase [Sinorhizobium meliloti AK83] gi|81854328|sp|Q92QN2|SYP_RHIME RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|15074218|emb|CAC45865.1| Probable prolyl-tRNA synthetase [Sinorhizobium meliloti 1021] gi|306896606|gb|EFN27354.1| prolyl-tRNA synthetase [Sinorhizobium meliloti AK83] gi|306904066|gb|EFN34652.1| prolyl-tRNA synthetase [Sinorhizobium meliloti BL225C] Length = 442 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 278/438 (63%), Positives = 354/438 (80%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+PIL+ENP++AEI SH+LMLRTGM+ Q S GIY+WLPLG++ LD VNAIIREE Sbjct: 1 MRLSRFFMPILKENPKEAEIVSHRLMLRTGMVRQQSAGIYTWLPLGKRVLDKVNAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR+GAIE+ +PTLQSA+LW ESGRYD+YGKEMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 61 QNRSGAIELLMPTLQSAELWQESGRYDAYGKEMLRIKDRQDRPMLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSYRNLP Y IQLKFRDE+RPRFG MRSREFLMKDAYSFDL G++H+YNKMF + Sbjct: 121 YVKSYRNLPLNLYHIQLKFRDEIRPRFGTMRSREFLMKDAYSFDLDRAGAEHAYNKMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGG+LSHEFI+LADTGE++VFC KDF+ F IP E+T+FD Sbjct: 181 YLRTFDRMGLRAIPMRADTGPIGGNLSHEFIILADTGESEVFCHKDFLGFDIPGEDTNFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ L +I ++WT+ YAATS++H+E F ++ E +R+SARGIEVGHIFYFGTKYS M A Sbjct: 241 DVAGLKTIFDKWTSRYAATSEMHDEAAFGAIAEGERLSARGIEVGHIFYFGTKYSEAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK+H V MGSYGIG R+V A+IE+SHD GIIWP +APF + +IN+K D+ Sbjct: 301 KVLGPDGKEHTVHMGSYGIGPTRLVPAIIEASHDDNGIIWPKGIAPFDVVVINMKTGDEA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C AC K+Y+ L K G DV DD E+ G +FA ADL+G P+QVIVG + +++ +VE+K Sbjct: 361 CDAACGKVYSDLGKAGFDVLLDDTDERAGGKFATADLIGVPVQVIVGPRSIANGEVEVKD 420 Query: 421 RLTGIREDMSLEEVINYA 438 R TG RE M++E IN Sbjct: 421 RKTGARETMTVEAAINKL 438 >gi|150396141|ref|YP_001326608.1| prolyl-tRNA synthetase [Sinorhizobium medicae WSM419] gi|166980159|sp|A6U7Z3|SYP_SINMW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|150027656|gb|ABR59773.1| prolyl-tRNA synthetase [Sinorhizobium medicae WSM419] Length = 442 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 280/438 (63%), Positives = 355/438 (81%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+PIL+ENP++AEI SH+LMLRTGMI Q S GIY+WLPLG++ LD VNA+IREE Sbjct: 1 MRLSRFFMPILKENPKEAEIVSHRLMLRTGMIRQQSAGIYTWLPLGKRVLDKVNAVIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR+GAIE+ +PTLQSA+LW ESGRYD+YGKEMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 61 QNRSGAIELLMPTLQSAELWQESGRYDAYGKEMLRIKDRQDRPMLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSYRNLP Y IQLKFRDE+RPRFG MRSREFLMKDAYSFDL G++H+Y +MF + Sbjct: 121 YVKSYRNLPLNLYHIQLKFRDEIRPRFGTMRSREFLMKDAYSFDLDRAGAEHAYKRMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGG+LSHEFI+LADTGE++VFC KDF+ F IP E+T+FD Sbjct: 181 YLRTFDRLGLRAIPMRADTGPIGGNLSHEFIILADTGESEVFCHKDFLGFDIPGEDTNFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ S+N+I E+WT+ YAATS++H E FD++PE +R+SARGIEVGHIFYFGTKYS M A Sbjct: 241 DVASMNAIFEKWTSRYAATSEMHEEAAFDAIPEGERLSARGIEVGHIFYFGTKYSEAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK+H V MGSYGIG R+V A+IE+SHD GIIWP +APF I +IN+K D Sbjct: 301 KVLGPDGKEHTVHMGSYGIGPTRLVPAIIEASHDDNGIIWPKGIAPFDIVVINMKTGDDA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C AC ++Y+ L K G DV DD E+ G +FA AD++G P+QVIVG + +++ +VE+K Sbjct: 361 CDTACGRLYSDLGKAGFDVLLDDTDERAGGKFATADIIGVPVQVIVGPRSIANGEVEVKD 420 Query: 421 RLTGIREDMSLEEVINYA 438 R TG RE M++E IN Sbjct: 421 RKTGARETMTVEAAINKL 438 >gi|153009733|ref|YP_001370948.1| prolyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188] gi|166980136|sp|A6X1L5|SYP_OCHA4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|151561621|gb|ABS15119.1| prolyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188] Length = 442 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 264/441 (59%), Positives = 337/441 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCDIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR ++ M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQERDMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QVFC K ++D +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVFCDKAYLDLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDIVNRWTTPYAATDEMHDEADWSKVKPEDQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+ HD GIIWP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEAFHDDAGIIWPKAIAPFGAGIVNMKPGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EKIY L+ G D DD ++ G++FA DL+G P QVIVG + V+ +VEIK Sbjct: 361 CDAVSEKIYEALTNAGVDPLLDDTDDRPGAKFATMDLIGLPTQVIVGPRGVAAGEVEIKD 420 Query: 421 RLTGIREDMSLEEVINYASHR 441 R TG R+ +S+E IN + Sbjct: 421 RKTGERQSLSVEAAINLLTAE 441 >gi|295689605|ref|YP_003593298.1| prolyl-tRNA synthetase [Caulobacter segnis ATCC 21756] gi|295431508|gb|ADG10680.1| prolyl-tRNA synthetase [Caulobacter segnis ATCC 21756] Length = 443 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 253/440 (57%), Positives = 329/440 (74%), Gaps = 1/440 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P DA+I SH+LMLR GMI Q + GIY+WLPLG + L+ + I+REE Sbjct: 1 MRLSRYFLPVLKEAPSDAQIVSHQLMLRAGMIRQEAAGIYAWLPLGLRVLNKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GAIE+ +PT+Q ADLW ESGRYD YG EMLR+ DR+ + +++GPT EEV+TDIFR+ Sbjct: 61 MDRAGAIELLMPTIQLADLWRESGRYDDYGDEMLRITDRHKRELLFGPTAEEVVTDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY++LP Y IQ KFRDE RPRFGVMR REF MKDAYSFDL +G++ SYN+MFV+ Sbjct: 121 SIKSYKDLPKNLYNIQWKFRDERRPRFGVMRGREFFMKDAYSFDLDADGARKSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL +F R+GLK++PMRA++GPIGGDLSHEFIVLA+TGE+ VFC KD ++ P P + D+ Sbjct: 181 YLNLFARMGLKAVPMRADTGPIGGDLSHEFIVLAETGESAVFCHKDLVEMPAPGPDLDWI 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV Q TA YAAT ++H+E F++LPE R+SARGIEVGHIF FGTKYS PM A Sbjct: 241 N-GDLQPIVNQRTALYAATEEMHDEAAFNALPEGDRLSARGIEVGHIFSFGTKYSEPMKA 299 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DG+ VQMGSYG+G R++ A+IE+SHD GIIWP+SVAPF + ++N++ D Sbjct: 300 TVQGPDGQQVPVQMGSYGVGVSRLLGAIIEASHDEGGIIWPESVAPFDVGIVNMRQGDAA 359 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACE Y L G DV +DD + G++FA DL+G P Q+IVG K +++ VEIK+ Sbjct: 360 CDAACETAYNALKAAGRDVLYDDTDARGGAKFATMDLIGLPWQLIVGPKGIAEGVVEIKN 419 Query: 421 RLTGIREDMSLEEVINYASH 440 R TG R SL+ V++ + Sbjct: 420 RKTGERHTASLDSVLDGLTK 439 >gi|239831704|ref|ZP_04680033.1| prolyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301] gi|239823971|gb|EEQ95539.1| prolyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301] Length = 446 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 262/441 (59%), Positives = 339/441 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIY+WLP+G K L+ V IIREE Sbjct: 5 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYAWLPIGLKVLNKVCDIIREE 64 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR ++ M++GPT+EE++TDIFRS Sbjct: 65 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQERDMLFGPTNEEMVTDIFRS 124 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 125 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 184 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QVFC K ++D +P +TDF Sbjct: 185 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVFCDKAYLDLAVPGADTDFR 244 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV++WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 245 NDAQLTDIVQRWTTPYAATDEMHDEADWAKVKPEDQVSARGIEVGHIFHFGTKYSEPMGA 304 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+ HD GIIWP ++APF ++N+K D+ Sbjct: 305 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEAFHDDAGIIWPKAIAPFGAGIVNMKPGDEG 364 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD ++ G++FA DL+G P QVIVG + V+ +VEIK Sbjct: 365 CDAVSEKLYEALTNAGVDPLLDDTDDRPGAKFATMDLIGLPTQVIVGPRGVAAGEVEIKD 424 Query: 421 RLTGIREDMSLEEVINYASHR 441 R TG R+++S+E IN + Sbjct: 425 RKTGERQNLSVEAAINLLTAE 445 >gi|325292651|ref|YP_004278515.1| Prolyl-tRNA synthetase [Agrobacterium sp. H13-3] gi|325060504|gb|ADY64195.1| Prolyl-tRNA synthetase [Agrobacterium sp. H13-3] Length = 477 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 279/438 (63%), Positives = 357/438 (81%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+PIL+ENP++AEI SH+LMLR GMI Q S GIYSWLPLG++ LD VN IIREE Sbjct: 38 MRLSRYFMPILKENPKEAEIVSHRLMLRAGMIRQQSAGIYSWLPLGKRVLDKVNRIIREE 97 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R+GAIE+ +PTLQ+A+LW ESGRYD YGKEMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 98 QDRSGAIELLMPTLQTAELWQESGRYDDYGKEMLRIKDRQDRQMLYGPTNEEMITDIFRS 157 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+NLP Y IQLKFRDE+RPRFG MRSREFLMKDAYSFDLT E + HSYNKMFV+ Sbjct: 158 YVKSYKNLPLNLYHIQLKFRDEVRPRFGTMRSREFLMKDAYSFDLTKEDAIHSYNKMFVA 217 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGG+ SHEFI+LADTGE++VFC K F+D IP+++T+FD Sbjct: 218 YLRTFERLGLRAIPMRADTGPIGGNHSHEFIILADTGESEVFCHKSFLDRAIPADDTNFD 277 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ +L + ++WTA YAATS++H+E +D++P+ +R+SARGIEVGHIFYFGTKYS PM A Sbjct: 278 DVAALQGVFDEWTADYAATSEMHDEAAYDAIPDGQRLSARGIEVGHIFYFGTKYSEPMGA 337 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +GADGK+H V MGSYGIG R+V A+IE+SHD GIIWP SVAPF + +IN+KA D Sbjct: 338 KVQGADGKEHPVHMGSYGIGPTRLVPAIIEASHDENGIIWPASVAPFDVVIINMKAGDAA 397 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACEK+Y LS G DV +DD ++ G +FA ADL+G P+Q+IVG + ++ +VE+K Sbjct: 398 CDAACEKLYYSLSNAGKDVLYDDTDDRAGQKFATADLIGVPMQIIVGPRSAANGEVEVKD 457 Query: 421 RLTGIREDMSLEEVINYA 438 R TG RE +++E +N Sbjct: 458 RKTGDRETVTIEAAMNRV 475 >gi|298291828|ref|YP_003693767.1| prolyl-tRNA synthetase [Starkeya novella DSM 506] gi|296928339|gb|ADH89148.1| prolyl-tRNA synthetase [Starkeya novella DSM 506] Length = 440 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 255/439 (58%), Positives = 336/439 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GMI Q S GIY+WLPLG++ LD + ++REE Sbjct: 1 MRLSRYFLPILREVPKEAEIVSHRLMLRAGMIRQESAGIYAWLPLGKRVLDKICNVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR+GAIE+ +PT+QSADLW ESGRYD YGKEMLR+ DR+++ M++GPT+EE++T+I R+ Sbjct: 61 QNRSGAIEILMPTIQSADLWRESGRYDDYGKEMLRIKDRHERDMLFGPTNEEMLTEIVRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYS DL E + +YN+MFV+ Sbjct: 121 YVKSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSVDLDFESAVVAYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGLK+IPM A++GPIGG+ SHEFI+LA TGE+QVFC D++ P + DF Sbjct: 181 YLRTFERLGLKAIPMVADTGPIGGNHSHEFIILASTGESQVFCHSDYLGMDTPGSDVDFQ 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D +L +IV +WT+ YAAT + H+E F+++PE +R+SARGIEVGHIFYFGTKYS PM+A Sbjct: 241 DPAALQTIVNRWTSLYAATEEKHDEAAFEAIPEGQRLSARGIEVGHIFYFGTKYSEPMNA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G DG + V MGSYGIG R+ AA+IE+SHD GIIWP+++APF++ L+N+K D Sbjct: 301 TVAGPDGVERPVHMGSYGIGPSRLAAAIIEASHDENGIIWPEAIAPFRVGLLNLKVGDAA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE IYA L+ DV +DD E+ GS+FA ADL+G P Q+IVG K +++ VE+K Sbjct: 361 TDAACEAIYAELASRNIDVLYDDTDERPGSKFATADLIGLPWQIIVGPKGLANGMVELKR 420 Query: 421 RLTGIREDMSLEEVINYAS 439 R G RE + + + + Sbjct: 421 RADGTRETLPVAAALARIT 439 >gi|190891305|ref|YP_001977847.1| prolyl-tRNA synthetase [Rhizobium etli CIAT 652] gi|226701323|sp|B3PW17|SYP_RHIE6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|190696584|gb|ACE90669.1| prolyl-tRNA synthetase protein [Rhizobium etli CIAT 652] Length = 440 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 287/438 (65%), Positives = 363/438 (82%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+PIL+ENP++AEI SH+LMLR GMI Q S+GIYSWLPLG++ LD VNAIIREE Sbjct: 1 MRLSRYFMPILKENPKEAEIVSHRLMLRAGMIRQQSQGIYSWLPLGKRVLDKVNAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+S+PTLQSA+LW ESGRYD+YGKEMLR+ DR ++ M+YGPT+EE++TDIFRS Sbjct: 61 QNRAGAIELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQERPMLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQLKFRDE+RPRFG MRSREF+MKDAYSFDLT EG++HSYNKMF + Sbjct: 121 SVKSYKDLPLNLYHIQLKFRDEIRPRFGTMRSREFMMKDAYSFDLTREGAEHSYNKMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGG+LSHEFI+LADTGE++VFC KDF+DF IP E+TDFD Sbjct: 181 YLRTFDRLGLRAIPMRADTGPIGGNLSHEFIILADTGESEVFCHKDFVDFDIPGESTDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L +I ++WT+ YAATS++H+E F+++PE +R+SARGIE GHIFYFGTKYS PM A Sbjct: 241 SVEGLQAIFDKWTSLYAATSEMHDEAAFNAVPEGERLSARGIEAGHIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H+V MGSYGIG R+V A+IE+SHD GIIWP SVAPF + +IN+KA DQ Sbjct: 301 KVQGPDGKEHFVHMGSYGIGPTRLVPAIIEASHDDNGIIWPASVAPFDVVVINMKAGDQA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C D CE IYA L+K G DV +DD ++ G++FA ADL+G P+Q+I G + V++ +VE+K Sbjct: 361 CDDTCELIYAALTKAGKDVLYDDTDDRAGTKFATADLIGVPVQIIAGPRAVANGEVEVKD 420 Query: 421 RLTGIREDMSLEEVINYA 438 R TG RE M++E IN Sbjct: 421 RKTGARETMTIEAAINRF 438 >gi|159184694|ref|NP_354297.2| prolyl-tRNA synthetase [Agrobacterium tumefaciens str. C58] gi|81848693|sp|Q8UFV9|SYP_AGRT5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|159139984|gb|AAK87082.2| prolyl-tRNA synthetase [Agrobacterium tumefaciens str. C58] Length = 440 Score = 421 bits (1083), Expect = e-115, Method: Composition-based stats. Identities = 283/437 (64%), Positives = 357/437 (81%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR GMI Q S GIYSWLPLG++ LD VN IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRAGMIRQQSAGIYSWLPLGKRVLDKVNKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PTLQ+A+LW ESGRYD YGKEMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 61 QNRAGAIELLMPTLQTAELWQESGRYDDYGKEMLRIKDRQDRQMLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+NLP Y IQLKFRDE+RPRFG MRSREFLMKDAYSFDLT E + HSYNKMFV+ Sbjct: 121 YVKSYKNLPLNLYHIQLKFRDEVRPRFGTMRSREFLMKDAYSFDLTKEDAIHSYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGG+ SHEFI+LADTGE++VFC K F+D IP+E+TDFD Sbjct: 181 YLRTFERLGLRAIPMRADTGPIGGNHSHEFIILADTGESEVFCHKSFLDRAIPAESTDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ +L + ++WTA YAATS++H++ +D++PE +R+SARGIEVGHIFYFGTKYS PM A Sbjct: 241 DVAALQGVFDEWTADYAATSEMHDDAAYDAIPEGERLSARGIEVGHIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+V A+IE+SHD GIIWP SVAPF + +IN+KA D Sbjct: 301 KVQGKDGKEHPVHMGSYGIGPTRLVPAIIEASHDENGIIWPASVAPFDVVIINMKAGDAA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACEK+Y +LS G DV +DD ++ G +FA ADL+G P+Q+IVG + V++ +VE+K Sbjct: 361 CDAACEKLYYQLSNAGKDVLYDDTDDRAGQKFATADLIGVPVQIIVGPRSVANGEVEVKD 420 Query: 421 RLTGIREDMSLEEVINY 437 R TG RE +++E +N Sbjct: 421 RKTGERETVTIEAAMNK 437 >gi|327194827|gb|EGE61661.1| prolyl-tRNA synthetase protein [Rhizobium etli CNPAF512] Length = 440 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 288/438 (65%), Positives = 364/438 (83%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+PIL+ENP++AEI SH+LMLR GMI Q S+GIYSWLPLG++ LD VNAIIREE Sbjct: 1 MRLSRYFMPILKENPKEAEIVSHRLMLRAGMIRQQSQGIYSWLPLGKRVLDKVNAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+S+PTLQSA+LW ESGRYD+YGKEMLR+ DR ++ M+YGPT+EE++TDIFRS Sbjct: 61 QNRAGAIELSMPTLQSAELWQESGRYDAYGKEMLRINDRQERPMLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQLKFRDE+RPRFG MRSREF+MKDAYSFDLT EG++HSYNKMF + Sbjct: 121 SVKSYKDLPLNLYHIQLKFRDEIRPRFGTMRSREFMMKDAYSFDLTREGAEHSYNKMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGG+LSHEFI+LADTGE++VFC KDF+DF IP E+TDFD Sbjct: 181 YLRTFDRLGLRAIPMRADTGPIGGNLSHEFIILADTGESEVFCHKDFVDFDIPGESTDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L +I ++WT+ YAATS++H+E F+++PE +R+SARGIEVGHIFYFGTKYS PM A Sbjct: 241 SVEGLQAIFDKWTSLYAATSEMHDEAAFNAVPEGERLSARGIEVGHIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H+V MGSYGIG R+V A+IE+SHD GIIWP SVAPF + +IN+KA DQ Sbjct: 301 KVQGPDGKEHFVHMGSYGIGPTRLVPAIIEASHDDNGIIWPASVAPFDVVVINMKAGDQA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C D CE IYA L+K G DV +DD ++ G++FA ADL+G P+Q+I G + V++ +VE+K Sbjct: 361 CDDTCELIYAALTKAGKDVLYDDTDDRAGTKFATADLIGVPVQIIAGPRAVANGEVEVKD 420 Query: 421 RLTGIREDMSLEEVINYA 438 R TG RE M++E IN Sbjct: 421 RKTGARETMTIEAAINRF 438 >gi|162329642|ref|YP_469149.2| prolyl-tRNA synthetase [Rhizobium etli CFN 42] gi|114152238|sp|Q2K9R4|SYP_RHIEC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 440 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 288/438 (65%), Positives = 360/438 (82%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+PIL+ENP++AEI SH+LMLR GMI Q S+GIYSWLPLG++ LD VNAIIREE Sbjct: 1 MRLSRYFMPILKENPKEAEIVSHRLMLRAGMIRQQSQGIYSWLPLGKRVLDKVNAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+S+PTLQSA+LW ESGRYD+YGKEMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 61 QNRAGAIELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQDRPMLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQLKFRDE+RPRFG MRSREF+MKDAYSFDLT EG++HSYNKMF + Sbjct: 121 SVKSYKDLPLNLYHIQLKFRDEIRPRFGTMRSREFMMKDAYSFDLTREGAEHSYNKMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGG+LSHEFI+LADTGE++VFC KDF+ F IP ENTDFD Sbjct: 181 YLRTFERLGLRAIPMRADTGPIGGNLSHEFIILADTGESEVFCHKDFVGFDIPGENTDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L +I ++WT+ YAATS++H+E F+++PE R+SARGIEVGHIFYFGTKYS PM A Sbjct: 241 SVEGLKAIFDKWTSLYAATSEMHDEAAFNAVPEGDRLSARGIEVGHIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H+V MGSYGIG R+V A+IE+SHD GIIWP SVAPF + +IN+K DQ Sbjct: 301 KVQGPDGKEHFVHMGSYGIGPTRLVPAIIEASHDDNGIIWPASVAPFDVVVINMKVGDQA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C D CE IYA L K G DV +DD ++ G++FA ADL+G P+Q+I G + V++ +VE+K Sbjct: 361 CDDTCELIYAALKKAGKDVLYDDTDDRAGTKFATADLIGVPVQIIAGPRAVANGEVEVKD 420 Query: 421 RLTGIREDMSLEEVINYA 438 R TG RE M++E IN Sbjct: 421 RKTGARETMTIEAAINRF 438 >gi|170742529|ref|YP_001771184.1| prolyl-tRNA synthetase [Methylobacterium sp. 4-46] gi|226701312|sp|B0ULM2|SYP_METS4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|168196803|gb|ACA18750.1| prolyl-tRNA synthetase [Methylobacterium sp. 4-46] Length = 444 Score = 421 bits (1081), Expect = e-115, Method: Composition-based stats. Identities = 257/439 (58%), Positives = 343/439 (78%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GMI Q + GIY+WLPLG + L+ V +IR E Sbjct: 1 MRLSRYFLPILRETPKEAEIVSHRLMLRAGMIRQEAAGIYAWLPLGLRVLNRVVEVIRAE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R+GAIE+ +PT+QSA+LW ESGRY++YGKEMLR+ DR+++ M++GPT+EE++T IFRS Sbjct: 61 QDRSGAIELLMPTIQSAELWRESGRYEAYGKEMLRIRDRHEREMLFGPTNEEMITAIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY++LP + Y IQ KFRDE+RPRFG MRSREFLMKDAYSFDL G++H+YNKMFV+ Sbjct: 121 AVRSYKDLPKSLYHIQWKFRDEVRPRFGTMRSREFLMKDAYSFDLDEAGARHAYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGLK+IPMRAE+GPIGG+LSHEFI+LA TGE++V+C + ++DFPIP +TDFD Sbjct: 181 YLRTFARLGLKAIPMRAETGPIGGNLSHEFIILAQTGESEVYCDRAYLDFPIPPGSTDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ +L + V+ WT+ YAATS++H + F ++PE R++ARGIEVGHIFYFGTKYS PM A Sbjct: 241 DVAALQATVDHWTSRYAATSEMHEPERFAAVPEEARMAARGIEVGHIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG++ V MGSYGIG R+VAA+IE+SHD GI+WPD+VAPF + L+N+K D Sbjct: 301 RVTGPDGQERPVHMGSYGIGPSRLVAAIIEASHDEAGIVWPDAVAPFDVGLLNLKTGDIA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC +I +L G V +DD E+ G++FA ADL+G P QVIVG K +++ +VE+K Sbjct: 361 TDAACARIQEQLEAAGLSVLYDDRDERPGAKFATADLIGLPWQVIVGPKGLAEGQVELKR 420 Query: 421 RLTGIREDMSLEEVINYAS 439 R TG RE ++ + + Sbjct: 421 RATGERETVAPDALAARLR 439 >gi|254418115|ref|ZP_05031839.1| prolyl-tRNA synthetase [Brevundimonas sp. BAL3] gi|196184292|gb|EDX79268.1| prolyl-tRNA synthetase [Brevundimonas sp. BAL3] Length = 438 Score = 421 bits (1081), Expect = e-115, Method: Composition-based stats. Identities = 247/440 (56%), Positives = 328/440 (74%), Gaps = 4/440 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLP L+E P DA+I SH+LMLR GMI Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLSRFFLPTLKEAPSDAQIVSHQLMLRAGMIKQEAAGIYAWLPLGLRVLRKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GA+E+ +PTLQ ADLW ESGRYD+YG EMLR+ DR+++ ++YGPT+EE++TDIFR+ Sbjct: 61 QQRAGAVELLMPTLQLADLWRESGRYDAYGPEMLRITDRHERELLYGPTNEEMITDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY++LP + IQ KFRDE RPRFGVMR REFLMKDAYSFD+ ++ +YN+MFV+ Sbjct: 121 YVKSYKSLPLNLFHIQWKFRDERRPRFGVMRGREFLMKDAYSFDVDEASARKAYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL F R+GLK++PMRA++GPIGGDLSHEFIVLA+TGE+ VFC K ++ P P + D+D Sbjct: 181 YLNTFARMGLKAVPMRADTGPIGGDLSHEFIVLAETGESAVFCDKALVEMPAPGADVDWD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D+ S+ V+Q TA YAAT ++H+E F++ E R+SARGIEVGHIFYFG KYS PM Sbjct: 241 DLQSI---VDQRTALYAATEEMHDEARFEAETAEGDRLSARGIEVGHIFYFGEKYSAPMK 297 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG+D V MGSYG+G R++ A+IE+SHD GIIWPD+VAPF + +IN++A+D Sbjct: 298 AKVAGPDGQDAEVHMGSYGVGVSRLLGAIIEASHDEGGIIWPDAVAPFDVVVINLRANDA 357 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACE A+L K+G DV +DD E+ G +FA ADL+G P Q+ +G K ++D VE+K Sbjct: 358 AVSAACEDAVAQLEKLGKDVLYDDTDERPGGKFATADLIGVPWQLTIGPKGLADGVVELK 417 Query: 420 HRLTGIREDMSLEEVINYAS 439 R TG + + L E I + Sbjct: 418 RRATGEKVSVPLAEAIERLT 437 >gi|116251485|ref|YP_767323.1| prolyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841] gi|114152239|sp|Q1MIJ6|SYP_RHIL3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|115256133|emb|CAK07214.1| putative prolyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841] Length = 440 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 287/438 (65%), Positives = 361/438 (82%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+PIL+ENP++AEI SH+LMLR GMI Q S+GIYSWLPLG++ LD VNAIIR+E Sbjct: 1 MRLSRFFMPILKENPKEAEIVSHRLMLRAGMIRQQSQGIYSWLPLGKRVLDKVNAIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+S+PTLQSA+LW ESGRYD+YGKEMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 61 QNRAGAIELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQDRPMLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQLKFRDE+RPRFG MRSREF+MKDAYSFDLT E ++HSYNKMF + Sbjct: 121 SVKSYKDLPLNLYHIQLKFRDEIRPRFGTMRSREFMMKDAYSFDLTREAAEHSYNKMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGG LSHEFI+LADTGE++VFC KDF+DF +P E+TDFD Sbjct: 181 YLRTFDRLGLRAIPMRADTGPIGGKLSHEFIILADTGESEVFCHKDFVDFDVPGEHTDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L +I ++WT+ YAATS++H+E F+++PE R+SARGIEVGHIFYFGTKYS PM A Sbjct: 241 SVEGLQAIFDKWTSLYAATSEMHDEAAFNAVPEGDRLSARGIEVGHIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H+V MGSYGIG R+V A+IE+SHD GIIWP SVAPF I +IN+KA DQ Sbjct: 301 KVQGPDGKEHFVHMGSYGIGPTRLVPAIIEASHDDNGIIWPASVAPFDIVVINMKAGDQA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C D CE IYA LSK G DV +DD ++ G++FA ADL+G P+Q+I G + V++ +VE+K Sbjct: 361 CDDTCELIYAALSKAGKDVLYDDTDDRAGTKFATADLIGVPVQIIAGPRAVANGEVEVKD 420 Query: 421 RLTGIREDMSLEEVINYA 438 R TG RE M++E IN Sbjct: 421 RKTGARETMTIEAAINRF 438 >gi|114707388|ref|ZP_01440285.1| prolyl-tRNA synthetase [Fulvimarina pelagi HTCC2506] gi|114537269|gb|EAU40396.1| prolyl-tRNA synthetase [Fulvimarina pelagi HTCC2506] Length = 440 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 261/439 (59%), Positives = 336/439 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E PR+AEI SH+LMLR GMI Q + G+Y++LPLG K L+ V AIIREE Sbjct: 1 MRLSRYFLPILKETPREAEIVSHQLMLRAGMIRQQAAGLYTFLPLGLKVLNKVCAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YG+EMLR+ DR+ + ++YGPT+EE++TDIFRS Sbjct: 61 QNRAGANELLMPTIQSADLWRESGRYDAYGEEMLRITDRHKRDLLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SYR+LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFDL E ++ +Y++MFVS Sbjct: 121 YVRSYRSLPLNLYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDLDFESAQTAYHRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R GL++IPMRA++GPIGG+LSHEFI+LA TGE++VFC +D++ IPSE DFD Sbjct: 181 YLRTFDRCGLQAIPMRADTGPIGGNLSHEFIILASTGESEVFCHRDYLGMEIPSEAIDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L SIVE+WT PYAAT ++H+E ++++P N +++ARGIEVGHIFYFGTKYS M+A Sbjct: 241 DAGQLASIVEKWTTPYAATDEMHDETAWNTVPANHQLNARGIEVGHIFYFGTKYSAAMNA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGKD V MGSYGIG R+VAA IE+ HD GIIWP S+APF + LIN+K D Sbjct: 301 AVTGPDGKDVPVHMGSYGIGPSRLVAAAIEAFHDEAGIIWPRSIAPFDVGLINMKPGDAE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACEKIY + + G DV +DD + G +FA DL+G P QVI+G + + E+K Sbjct: 361 CDAACEKIYEEMKQAGIDVLYDDQEGRAGGKFATMDLIGLPTQVIIGPRGAKSGEAEVKD 420 Query: 421 RLTGIREDMSLEEVINYAS 439 R +G RE + +++VI Sbjct: 421 RASGARETIPMDQVIAKVK 439 >gi|114569925|ref|YP_756605.1| prolyl-tRNA synthetase [Maricaulis maris MCS10] gi|122316107|sp|Q0APX0|SYP_MARMM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114340387|gb|ABI65667.1| prolyl-tRNA synthetase [Maricaulis maris MCS10] Length = 444 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 244/440 (55%), Positives = 326/440 (74%), Gaps = 2/440 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P DAEI SH+LMLR GMI Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLSRYFLPVLKETPSDAEIVSHQLMLRAGMIKQEAAGIYAWLPLGHRVLRKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GA+E+ +PT+QSADLW ESGRYD YG EMLR+ DR+D+ M++GPT+EE++TDIFRS Sbjct: 61 QDRAGAVELLMPTIQSADLWRESGRYDDYGDEMLRITDRHDRDMLFGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + KSY+++P Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ ++ SYN+MFV+ Sbjct: 121 YCKSYKDVPKLLYHIQWKFRDERRPRFGVMRGREFLMKDAYSFDVDEAAARRSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL F RLGLK++PM+A++GPIGGDLSHEFIVLA+TGE++VFC D ++ P + DFD Sbjct: 181 YLNTFARLGLKAVPMQADTGPIGGDLSHEFIVLAETGESEVFCHADLVEMGAPGLDVDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L +V+Q TA YAAT ++H + F ++P ++++SARGIEVGHIF FGTKYS PM A Sbjct: 241 --GDLQPLVDQRTALYAATEEMHQPEEFAAVPADRQLSARGIEVGHIFNFGTKYSEPMKA 298 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T + DG+ V MGSYG+G R++ A+IE+ HD KG IWP+SVAPF +IN++ D+ Sbjct: 299 TVQHQDGQPRPVHMGSYGVGVSRLLGAIIEAHHDEKGCIWPESVAPFGAGIINMRVGDEA 358 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACE Y L K G D +DD + G++FA ADL+G P Q++VG + + + K+E+K Sbjct: 359 CDAACETAYQGLVKAGLDPLYDDTDSRAGAKFATADLIGLPYQLVVGPRGLKEGKIELKV 418 Query: 421 RLTGIREDMSLEEVINYASH 440 R TG +MS E+ ++ + Sbjct: 419 RRTGETHEMSPEDAVSRLAE 438 >gi|158423310|ref|YP_001524602.1| prolyl-tRNA synthetase [Azorhizobium caulinodans ORS 571] gi|172047938|sp|A8I438|SYP_AZOC5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|158330199|dbj|BAF87684.1| prolyl-tRNA synthetase [Azorhizobium caulinodans ORS 571] Length = 440 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 255/439 (58%), Positives = 335/439 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++A+I SH+LMLR GMI Q S GIY+WLPLG + L+ + IIREE Sbjct: 1 MRLSRYFLPILREVPKEADIVSHRLMLRAGMIRQESAGIYAWLPLGLRVLNKICNIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNRTGA+E+ +PT+QSADLW ESGRYD YGKEMLR+ DR+++ M++GPT+EE++T+I R Sbjct: 61 QNRTGAVELLMPTIQSADLWRESGRYDDYGKEMLRIKDRHERDMLFGPTNEEMITEIVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY++LP Y IQ KFRDE+RPRFGV RSREFLMKDAYSFDL EG+KHSYNKMFV+ Sbjct: 121 SIKSYKSLPLNLYHIQWKFRDEVRPRFGVYRSREFLMKDAYSFDLDAEGAKHSYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPM A++GPIGG+LSHEFI+LA TGE++VFC D+++ P + +FD Sbjct: 181 YLRTFARMGLKAIPMVADTGPIGGNLSHEFIILASTGESEVFCHGDYLEMAPPPADVNFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D ++ +V WT YAAT + H+ F ++P ++++ARGIEVGHIFYFGTKYS P +A Sbjct: 241 DAAAIQQVVNDWTTLYAATEEKHDAATFAAIPAERQMAARGIEVGHIFYFGTKYSAPFNA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG +H + MGSYGIG R+VAA+IE+SHD GIIWPD+VAPF++ ++N+K D Sbjct: 301 KVLGPDGAEHLIHMGSYGIGPSRLVAAMIEASHDDAGIIWPDAVAPFQVGILNLKVGDSA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC +YA+L+ G DV +DD E+ GS+FA ADL+G P Q++VG K ++D KVE+K Sbjct: 361 VDAACADLYAKLTAAGVDVLYDDTDERAGSKFATADLIGLPWQILVGPKSLADGKVELKR 420 Query: 421 RLTGIREDMSLEEVINYAS 439 R+ G RE ++ E Sbjct: 421 RVDGSRELVTPAEAFERLK 439 >gi|241204106|ref|YP_002975202.1| prolyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857996|gb|ACS55663.1| prolyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 440 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 288/438 (65%), Positives = 361/438 (82%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+PIL+ENP++AEI SH+LMLR GMI Q S+GIYSWLPLG++ LD VNAIIR+E Sbjct: 1 MRLSRYFMPILKENPKEAEIVSHRLMLRAGMIRQQSQGIYSWLPLGKRVLDKVNAIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+S+PTLQSA+LW ESGRYD+YGKEMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 61 QNRAGAIELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQDRPMLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQLKFRDE+RPRFG MRSREF+MKDAYSFDLT EG++HSYNKMF + Sbjct: 121 SVKSYKDLPLNLYHIQLKFRDEIRPRFGTMRSREFMMKDAYSFDLTREGAEHSYNKMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGG LSHEFI+LADTGE++VFC KDF+DF IP +TDFD Sbjct: 181 YLRTFDRLGLRAIPMRADTGPIGGKLSHEFIILADTGESEVFCHKDFVDFDIPGAHTDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L +I ++WT+ YAATS++H+E F+++PE R+SARGIEVGHIFYFGTKYS PM A Sbjct: 241 SVEGLQAIFDKWTSLYAATSEMHDEAAFNAVPEGDRLSARGIEVGHIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H+V MGSYGIG R+V A+IE+SHD GIIWP SVAPF I +IN+KA DQ Sbjct: 301 KVQGPDGKEHFVHMGSYGIGPTRLVPAIIEASHDDNGIIWPASVAPFDIVVINMKAGDQA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C D CE IYA L+K G DV +DD ++ G++FA ADL+G P+Q+I G + V++ +VE+K Sbjct: 361 CDDTCELIYAALTKAGKDVLYDDTDDRAGTKFATADLIGVPVQIIAGPRAVANGEVEVKD 420 Query: 421 RLTGIREDMSLEEVINYA 438 R TG RE M++E IN Sbjct: 421 RKTGARETMTIEAAINRF 438 >gi|288958966|ref|YP_003449307.1| prolyl-tRNA synthetase [Azospirillum sp. B510] gi|288911274|dbj|BAI72763.1| prolyl-tRNA synthetase [Azospirillum sp. B510] Length = 437 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 240/438 (54%), Positives = 317/438 (72%), Gaps = 3/438 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S +F+P L+E P +A+I SH+LMLR GMI Q S GIY+WLPLG + L + I+REE Sbjct: 1 MRLSSFFMPTLKETPTEAQIVSHRLMLRAGMIRQTSAGIYAWLPLGYRVLRKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+ GA E+ +PT+QSADLW ESGRYD YGKEMLR+ DR+D+ M++GPT+EE++TDIFRS Sbjct: 61 QDAAGAQELLMPTIQSADLWRESGRYDDYGKEMLRITDRHDREMLFGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ P G++ SY KMF++ Sbjct: 121 FVKSYRQLPLNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDIDPAGARRSYQKMFLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRA++GPIGGDLSHEFI+LA+TGE+ VFC KD+M + + + Sbjct: 181 YLRTFARIGLKAIPMRADTGPIGGDLSHEFIILAETGESGVFCHKDWMTLDVLKDAPGME 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L ++ T YAAT + H+ +P+ VSARGIEVGHIF FGTKYS PM+A Sbjct: 241 D--DLQPFFDRVTGIYAATDEKHDPA-NSPVPDADLVSARGIEVGHIFNFGTKYSKPMNA 297 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G +G+ V+MGSYGIG R++ A+IE+SHD GIIWPD+VAPF + LIN+K+ D Sbjct: 298 VVAGPNGESIPVEMGSYGIGVSRLMGAIIEASHDDNGIIWPDAVAPFNVGLINLKSGDAE 357 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ++YA+L G +V +DD E+ G++FA DL+G P Q++VG + + VE+K Sbjct: 358 TDRVCAELYAKLEAAGLEVAYDDRDERPGAKFADMDLIGVPWQLVVGPRGLKSGVVELKR 417 Query: 421 RLTGIREDMSLEEVINYA 438 R TG +E++ +E + Sbjct: 418 RATGEKEELPVEAALAKL 435 >gi|209548882|ref|YP_002280799.1| prolyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|226701324|sp|B5ZYN2|SYP_RHILW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|209534638|gb|ACI54573.1| prolyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 440 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 286/438 (65%), Positives = 359/438 (81%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+PIL+ENP++AEI SH+LMLR GMI Q S+GIYSWLPLG++ LD VNAIIR+E Sbjct: 1 MRLSRYFMPILKENPKEAEIVSHRLMLRAGMIRQQSQGIYSWLPLGKRVLDKVNAIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+S+PTLQSA+LW ESGRYD+YGKEMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 61 QNRAGAIELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQDRPMLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQLKFRDE+RPRFG MRSREF+MKDAYSFDLT EG++HSYNKMF + Sbjct: 121 SVKSYKDLPLNLYHIQLKFRDEIRPRFGTMRSREFMMKDAYSFDLTREGAEHSYNKMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGG+LSHEFI+LADTGE++VFC KDF+ F IP + TDFD Sbjct: 181 YLRTFDRLGLRAIPMRADTGPIGGNLSHEFIILADTGESEVFCHKDFVGFDIPDDRTDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L +I ++WT+ YAATS++H+E F+++PE R+SARGIEVGHIFYFGTKYS M A Sbjct: 241 SVDGLKAIFDKWTSLYAATSEMHDEAAFNAVPEGDRLSARGIEVGHIFYFGTKYSEAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H+V MGSYGIG R+V A+IE+SHD GIIWP SVAPF I +IN+KA DQ Sbjct: 301 KVQGPDGKEHFVHMGSYGIGPTRLVPAIIEASHDDNGIIWPASVAPFDIVVINMKAGDQA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C D CE IYA L+K G DV +DD ++ G++FA ADL+G P Q+I G + V++ +VE+K Sbjct: 361 CDDTCELIYAALTKAGKDVLYDDTDDRAGTKFATADLIGVPFQIIAGPRAVANGEVEVKD 420 Query: 421 RLTGIREDMSLEEVINYA 438 R TG RE M++E IN Sbjct: 421 RKTGARETMTIEAAINRF 438 >gi|118590019|ref|ZP_01547423.1| prolyl-tRNA synthetase [Stappia aggregata IAM 12614] gi|118437516|gb|EAV44153.1| prolyl-tRNA synthetase [Stappia aggregata IAM 12614] Length = 442 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 250/444 (56%), Positives = 335/444 (75%), Gaps = 2/444 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GMI Q S GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPILKETPKEAEIVSHRLMLRAGMIRQQSAGIYSWLPLGLKVLRKIERIVEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GAI++ +PT+QSADLW ESGRYD+YGKEMLR+ DR+++ M++GPT+EE++TDIFR Sbjct: 61 QARAGAIQLLMPTIQSADLWRESGRYDAYGKEMLRITDRHERDMLFGPTNEEMITDIFRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFDL E ++H+YN+MFV+ Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDLDKESARHAYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPM+A++GPIGGD+SHEFI+LA+TGE++VFC K ++ P P+E+TDF Sbjct: 181 YLRTFARMGLKAIPMKADTGPIGGDMSHEFIILAETGESEVFCDKSLLELPTPAEDTDF- 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L IV +WT PYAAT ++H+E F +LPE+ RVSARGIEVGHIFYFGTKYS M A Sbjct: 240 -FSDLTPIVTEWTTPYAATDEMHDEAAFGALPEDTRVSARGIEVGHIFYFGTKYSDAMGA 298 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 A+G + V MGSYG+G R++ A+IE++HD GI+WP SVAPF + L+N+K D++ Sbjct: 299 KVATAEGTEVPVHMGSYGVGVSRLLGALIEANHDENGIVWPKSVAPFHVGLVNLKPGDEL 358 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 CE +YA+ G +V +DD + G++FA DL+G P QV+ G + + D +E+K Sbjct: 359 TDPVCEDLYAKFEAAGIEVLYDDTDTRAGAKFATMDLIGLPFQVVAGPRGLKDGLLEVKD 418 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R TG +E +S E +N + ++ Sbjct: 419 RATGEKEMLSPEATLNKLTAALTD 442 >gi|154248383|ref|YP_001419341.1| prolyl-tRNA synthetase [Xanthobacter autotrophicus Py2] gi|226701431|sp|A7INT8|SYP_XANP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|154162468|gb|ABS69684.1| prolyl-tRNA synthetase [Xanthobacter autotrophicus Py2] Length = 440 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 262/439 (59%), Positives = 342/439 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GMI Q S GIY+WLP G + L+ V IIREE Sbjct: 1 MRLSRYFLPILREVPKEAEIVSHRLMLRAGMIRQESAGIYAWLPFGLRVLNKVCNIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR+GAIEM +PT+QSADLW ESGRYD YGKEMLR+ DR+++ M++GPT+EE++T+I R+ Sbjct: 61 QNRSGAIEMLMPTIQSADLWRESGRYDDYGKEMLRIKDRHEREMLFGPTNEEMITEIVRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ LP Y IQ KFRDE+RPRFGV RSREFLMKDAYSFDL G++HSYNKMFV+ Sbjct: 121 YVKSYKALPLNLYHIQWKFRDEVRPRFGVYRSREFLMKDAYSFDLDAAGARHSYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPM A++GPIGG+LSHEFI+LA TGE++VFC D+++ PS + +FD Sbjct: 181 YLRTFARMGLKAIPMVADTGPIGGNLSHEFIILASTGESEVFCHGDYLEMAPPSADVNFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L S+ ++WT YAATS+ H+E F ++PE R++ARGIEVGHIFYFGTKYS P A Sbjct: 241 DAAGLQSVFDRWTELYAATSEKHDEAAFAAIPEASRMAARGIEVGHIFYFGTKYSEPFGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 GADG +H + MGSYGIG R+VAA+IE+SHD GIIWPD+VAPF++ ++N+KA D Sbjct: 301 KVLGADGAEHTIHMGSYGIGPSRLVAAMIEASHDDNGIIWPDAVAPFQVGILNLKAGDST 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACEK+YA L+ G DV +DD E+ G++FA ADL+G P Q++VG K ++D KVE+K Sbjct: 361 TGAACEKLYAELTAAGYDVLYDDTEERAGAKFATADLIGLPWQILVGPKGLADGKVELKR 420 Query: 421 RLTGIREDMSLEEVINYAS 439 R+ G RE ++ +++ Sbjct: 421 RVDGSRELIAPGDILERLK 439 >gi|218463078|ref|ZP_03503169.1| prolyl-tRNA synthetase [Rhizobium etli Kim 5] Length = 440 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 288/438 (65%), Positives = 361/438 (82%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+PIL+ENP++AEI SH+LMLR GMI Q S+GIYSWLPLG++ LD VNAIIR+E Sbjct: 1 MRLSRYFMPILKENPKEAEIVSHRLMLRAGMIRQQSQGIYSWLPLGKRVLDKVNAIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+S+PTLQSA+LW ESGRYD+YGKEMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 61 QNRAGAIELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQDRPMLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQLKFRDE+RPRFG MRSREF+MKDAYSFDLT EG++HSYNKMF + Sbjct: 121 SVKSYKDLPLNLYHIQLKFRDEIRPRFGTMRSREFMMKDAYSFDLTREGAEHSYNKMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGG+LSHEFI+LADTGE++VFC KDF+ F IP E TDFD Sbjct: 181 YLRTFERLGLRAIPMRADTGPIGGNLSHEFIILADTGESEVFCHKDFVGFDIPDERTDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L +I E+WT+ YAATS++H+E F+++PE+ R+SARGIEVGHIFYFGTKYS M A Sbjct: 241 SVEGLQAIFEKWTSLYAATSEMHDEAAFNAVPESDRLSARGIEVGHIFYFGTKYSETMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H+V MGSYGIG R+V A+IE+SHD GIIWP SVAPF I +IN+KA DQ Sbjct: 301 KVQGPDGKEHFVHMGSYGIGPTRLVPAIIEASHDDNGIIWPASVAPFDIVVINMKAGDQA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C D CE IYA L+K G DV +DD ++ G++FA ADL+G P+Q+I G + V++ +VE+K Sbjct: 361 CDDTCELIYAALTKAGKDVLYDDTDDRAGTKFATADLIGVPVQIIAGPRAVANGEVEVKD 420 Query: 421 RLTGIREDMSLEEVINYA 438 R TG RE M++E IN Sbjct: 421 RKTGARETMTIEAAINRF 438 >gi|218529196|ref|YP_002420012.1| prolyl-tRNA synthetase [Methylobacterium chloromethanicum CM4] gi|254782907|sp|B7KPK1|SYP_METC4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|218521499|gb|ACK82084.1| prolyl-tRNA synthetase [Methylobacterium chloromethanicum CM4] Length = 441 Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 255/441 (57%), Positives = 334/441 (75%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GMI Q + GIY+WLPLG + L+ V ++R E Sbjct: 1 MRLSRYFLPILRETPKEAEIISHRLMLRAGMIRQEAAGIYAWLPLGLRVLNKVCDVVRAE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GAIE+ +PT+Q+ADLW ESGRY++YGKEMLRL DR+++ ++YGPT EEV+T+IFR+ Sbjct: 61 QDRAGAIEILMPTIQAADLWRESGRYEAYGKEMLRLKDRHERELLYGPTAEEVVTEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SY++LP YQI KFRDE+RPRFG MRSREFLMKD YSFD+ ++HSYNK+FVS Sbjct: 121 STRSYKDLPKNLYQISWKFRDEVRPRFGTMRSREFLMKDGYSFDIDQAAARHSYNKVFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGGDLSHEFI+LA TGE++VFC + ++D P+P + DFD Sbjct: 181 YLRTFERLGLRAIPMRADTGPIGGDLSHEFIILAKTGESEVFCDQAYLDMPVPPPSVDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ L +V+ WT+ YAAT ++H+E +F +PE R+SARGIEVGHIFYFGTKYS PM A Sbjct: 241 DVAGLQGVVDAWTSHYAATDEMHDEAVFAEVPEASRLSARGIEVGHIFYFGTKYSTPMKA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG + V MGSYGIG R+VAA IE+SHD GIIWPD++APF ++LIN+K D Sbjct: 301 VVTGPDGSERPVHMGSYGIGPSRLVAATIEASHDEAGIIWPDAIAPFDVALINLKVGDGA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C AC +I A L G V +DD E+ G++FA ADL+G P QVIVG K +++ K+E+K Sbjct: 361 CDTACAEIQAALETAGLSVLYDDRDERPGAKFATADLIGLPWQVIVGPKGLAEGKIELKR 420 Query: 421 RLTGIREDMSLEEVINYASHR 441 R +G RE + ++ Sbjct: 421 RASGERETLDPVDLPARIRRL 441 >gi|16126174|ref|NP_420738.1| prolyl-tRNA synthetase [Caulobacter crescentus CB15] gi|221234945|ref|YP_002517381.1| prolyl-tRNA synthetase [Caulobacter crescentus NA1000] gi|81856261|sp|Q9A6Z5|SYP_CAUCR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782893|sp|B8GWT1|SYP_CAUCN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|13423386|gb|AAK23906.1| prolyl-tRNA synthetase [Caulobacter crescentus CB15] gi|220964117|gb|ACL95473.1| prolyl-tRNA synthetase [Caulobacter crescentus NA1000] Length = 443 Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats. Identities = 254/440 (57%), Positives = 330/440 (75%), Gaps = 1/440 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P DA+I SH+LMLR GMI Q + GIY+WLPLG + L+ + I+REE Sbjct: 1 MRSSRYFLPVLKEAPSDAQIVSHQLMLRAGMIRQEAAGIYAWLPLGLRVLNKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GAIE+ +PT+Q ADLW ESGRYD YG EMLR+ DR+ + +++GPT EEV+TDIFR+ Sbjct: 61 MDRAGAIELLMPTIQLADLWRESGRYDDYGDEMLRITDRHKRELLFGPTAEEVVTDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFDL +G++ SYN+MFV+ Sbjct: 121 SIKSYKDLPKNLYNIQWKFRDERRPRFGVMRGREFLMKDAYSFDLDADGARKSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL +F R+GLK++PMRA++GPIGGDLSHEFIVLA+TGE+ VFC KD ++ P P + D+ Sbjct: 181 YLNLFARMGLKAVPMRADTGPIGGDLSHEFIVLAETGESAVFCHKDLVEMPAPGPDLDWI 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L +V Q TA YAAT ++H+E F++LPE R+SARGIEVGHIF FGTKYS PM A Sbjct: 241 N-GDLQPLVNQRTALYAATEEMHDEAAFNALPEGDRLSARGIEVGHIFSFGTKYSEPMKA 299 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DG+ VQMGSYG+G R++ A+IE+SHD GIIWP+SVAPF + ++N++ D Sbjct: 300 TVQGPDGQQVPVQMGSYGVGVSRLLGAIIEASHDEGGIIWPESVAPFDVGIVNMRQGDAA 359 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACE Y L G +V +DD + G++FA DL+G P Q+IVG K +++ VEIKH Sbjct: 360 CDAACETAYNALKAAGREVLYDDTDARGGAKFATMDLIGLPWQLIVGPKGIAEGVVEIKH 419 Query: 421 RLTGIREDMSLEEVINYASH 440 R TG R SLE V++ + Sbjct: 420 RKTGERHTASLESVLDGLTK 439 >gi|254560035|ref|YP_003067130.1| proline-tRNA ligase [Methylobacterium extorquens DM4] gi|254267313|emb|CAX23145.1| proline-tRNA ligase [Methylobacterium extorquens DM4] Length = 442 Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats. Identities = 255/441 (57%), Positives = 334/441 (75%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GMI Q + GIY+WLPLG + L+ V ++R E Sbjct: 2 MRLSRYFLPILRETPKEAEIVSHRLMLRAGMIRQEAAGIYAWLPLGLRVLNKVCDVVRAE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GAIE+ +PT+Q+ADLW ESGRY++YGKEMLRL DR+++ ++YGPT EEV+T+IFR+ Sbjct: 62 QDRAGAIEILMPTIQAADLWRESGRYEAYGKEMLRLKDRHERELLYGPTAEEVVTEIFRA 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SY++LP YQI KFRDE+RPRFG MRSREFLMKD YSFD+ ++HSYNK+FVS Sbjct: 122 STRSYKDLPKNLYQISWKFRDEVRPRFGTMRSREFLMKDGYSFDIDQAAARHSYNKVFVS 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGGDLSHEFI+LA TGE++VFC + ++D P+P + DFD Sbjct: 182 YLRTFERLGLRAIPMRADTGPIGGDLSHEFIILAKTGESEVFCDQAYLDMPVPPPSVDFD 241 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ L +V+ WT+ YAAT ++H+E +F +PE R+SARGIEVGHIFYFGTKYS PM A Sbjct: 242 DVAGLQGVVDAWTSHYAATDEMHDEAVFAEVPEASRLSARGIEVGHIFYFGTKYSTPMKA 301 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG + V MGSYGIG R+VAA IE+SHD GIIWPD++APF ++LIN+K D Sbjct: 302 VVTGPDGSERPVHMGSYGIGPSRLVAATIEASHDEAGIIWPDAIAPFDVALINLKVGDGA 361 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C AC +I A L G V +DD E+ G++FA ADL+G P QVIVG K +++ K+E+K Sbjct: 362 CDAACAEIQAALETAGLSVLYDDRDERPGAKFATADLIGLPWQVIVGPKGLAEGKIELKR 421 Query: 421 RLTGIREDMSLEEVINYASHR 441 R +G RE + ++ Sbjct: 422 RASGERETLDPVDLPARIRRL 442 >gi|254713929|ref|ZP_05175740.1| prolyl-tRNA synthetase [Brucella ceti M644/93/1] gi|254717013|ref|ZP_05178824.1| prolyl-tRNA synthetase [Brucella ceti M13/05/1] gi|261218820|ref|ZP_05933101.1| prolyl-tRNA synthetase [Brucella ceti M13/05/1] gi|261321681|ref|ZP_05960878.1| prolyl-tRNA synthetase [Brucella ceti M644/93/1] gi|260923909|gb|EEX90477.1| prolyl-tRNA synthetase [Brucella ceti M13/05/1] gi|261294371|gb|EEX97867.1| prolyl-tRNA synthetase [Brucella ceti M644/93/1] Length = 442 Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats. Identities = 262/441 (59%), Positives = 339/441 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V AIIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR ++ M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQEREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKPGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 361 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 420 Query: 421 RLTGIREDMSLEEVINYASHR 441 R TG R+ + +E IN + + Sbjct: 421 RKTGERQSLGIEAAINMLTAQ 441 >gi|304391639|ref|ZP_07373581.1| prolyl-tRNA synthetase [Ahrensia sp. R2A130] gi|303295868|gb|EFL90226.1| prolyl-tRNA synthetase [Ahrensia sp. R2A130] Length = 451 Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats. Identities = 257/447 (57%), Positives = 341/447 (76%), Gaps = 1/447 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++YFLP+L+E PR+AEIASH+LMLR GMI Q S GIYSWLPLG K L V I+REE Sbjct: 1 MRLTQYFLPVLKEAPREAEIASHQLMLRAGMIKQQSAGIYSWLPLGLKVLRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA+E+ +PT+QSADLW ESGRYD YGKEMLR+ DR+++ M++GPT+EE++TDIFR+ Sbjct: 61 QNRAGAVEVLMPTIQSADLWRESGRYDDYGKEMLRIQDRHERDMLFGPTNEEMITDIFRT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFDL + ++ +Y +MFVS Sbjct: 121 YVKSYKDLPLNLYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDLNADAARAAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLG+K+IPMRA++GPIGGDLSHEF++LADTGE++VFC DF +P D+ Sbjct: 181 YLRTFDRLGVKAIPMRADTGPIGGDLSHEFLILADTGESEVFCHSDFSKKTVPDAGVDYS 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D + IV+ WT+ YA T ++H+E L+ +PE+++++ARGIEVGHIF FG+KYS PM A Sbjct: 241 DDALIAGIVDDWTSGYARTDEMHDEALWAEVPEDEQLNARGIEVGHIFNFGSKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGKD V+MGSYGIG RVVAA++E+ HD GIIWPDSVAPF + LIN+++ D+V Sbjct: 301 KVTGPDGKDVPVEMGSYGIGPSRVVAALVEAGHDENGIIWPDSVAPFDVGLINLRSGDEV 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+ +YA+LS G DV +DD + G +FA+ADL+G P Q+IVG + + +VE+K Sbjct: 361 TDAACDDMYAQLSAAGLDVLYDDTDGRAGGKFALADLIGLPWQLIVGPRGLKTGEVELKA 420 Query: 421 RLTGIREDMSLEEVINYASH-RFSNNR 446 R +G R +S++ IN + + + Sbjct: 421 RASGERHTVSIDAAINQLTAWHVDSRK 447 >gi|148560203|ref|YP_001258799.1| prolyl-tRNA synthetase [Brucella ovis ATCC 25840] gi|166980104|sp|A5VQ02|SYP_BRUO2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|148371460|gb|ABQ61439.1| prolyl-tRNA synthetase [Brucella ovis ATCC 25840] Length = 442 Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats. Identities = 261/441 (59%), Positives = 338/441 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR ++ M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQEREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVFMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKPGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 361 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 420 Query: 421 RLTGIREDMSLEEVINYASHR 441 R TG R+ + +E IN + + Sbjct: 421 RKTGERQSLDIEAAINMLTAQ 441 >gi|163850499|ref|YP_001638542.1| prolyl-tRNA synthetase [Methylobacterium extorquens PA1] gi|226701309|sp|A9W1L5|SYP_METEP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|163662104|gb|ABY29471.1| prolyl-tRNA synthetase [Methylobacterium extorquens PA1] Length = 441 Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats. Identities = 255/441 (57%), Positives = 334/441 (75%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GMI Q + GIY+WLPLG + L+ V ++R E Sbjct: 1 MRLSRYFLPILRETPKEAEIVSHRLMLRAGMIRQEAAGIYAWLPLGLRVLNKVCDVVRAE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GAIE+ +PT+Q+ADLW ESGRY++YGKEMLRL DR+++ ++YGPT EEV+T+IFR+ Sbjct: 61 QDRAGAIEILMPTIQAADLWRESGRYEAYGKEMLRLKDRHERELLYGPTAEEVVTEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SY++LP YQI KFRDE+RPRFG MRSREFLMKD YSFD+ ++HSYNK+FVS Sbjct: 121 STRSYKDLPKNLYQISWKFRDEVRPRFGTMRSREFLMKDGYSFDIDQAAARHSYNKVFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGGDLSHEFI+LA TGE++VFC + ++D P+P + DFD Sbjct: 181 YLRTFERLGLRAIPMRADTGPIGGDLSHEFIILAKTGESEVFCDQAYLDMPVPPPSVDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ L +V+ WT+ YAAT ++H+E +F +PE R+SARGIEVGHIFYFGTKYS PM A Sbjct: 241 DVAGLQGVVDAWTSHYAATDEMHDEAVFAEVPEASRLSARGIEVGHIFYFGTKYSTPMKA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG + V MGSYGIG R+VAA IE+SHD GIIWPD++APF ++LIN+K D Sbjct: 301 VVTGPDGSERPVHMGSYGIGPSRLVAATIEASHDEAGIIWPDAIAPFDVALINLKVGDGA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C AC +I A L G V +DD E+ G++FA ADL+G P QVIVG K +++ K+E+K Sbjct: 361 CDTACAEIQAALETAGLSVLYDDRDERPGAKFATADLIGLPWQVIVGPKGLAEGKIELKR 420 Query: 421 RLTGIREDMSLEEVINYASHR 441 R +G RE + ++ Sbjct: 421 RASGERETLDPVDLPARIRRL 441 >gi|254718929|ref|ZP_05180740.1| prolyl-tRNA synthetase [Brucella sp. 83/13] gi|265983916|ref|ZP_06096651.1| prolyl-tRNA synthetase [Brucella sp. 83/13] gi|306838840|ref|ZP_07471671.1| prolyl-tRNA synthetase [Brucella sp. NF 2653] gi|264662508|gb|EEZ32769.1| prolyl-tRNA synthetase [Brucella sp. 83/13] gi|306406124|gb|EFM62372.1| prolyl-tRNA synthetase [Brucella sp. NF 2653] Length = 442 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 260/441 (58%), Positives = 338/441 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR ++ M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQEREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GI+WP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIVWPKAIAPFGAGIVNMKPGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 361 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 420 Query: 421 RLTGIREDMSLEEVINYASHR 441 R TG R+ + +E IN + + Sbjct: 421 RKTGERQSLGIEAAINMLTAQ 441 >gi|163843095|ref|YP_001627499.1| prolyl-tRNA synthetase [Brucella suis ATCC 23445] gi|254706964|ref|ZP_05168792.1| prolyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|254709928|ref|ZP_05171739.1| prolyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|256031421|ref|ZP_05445035.1| prolyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] gi|256159542|ref|ZP_05457310.1| prolyl-tRNA synthetase [Brucella ceti M490/95/1] gi|256254829|ref|ZP_05460365.1| prolyl-tRNA synthetase [Brucella ceti B1/94] gi|260168555|ref|ZP_05755366.1| prolyl-tRNA synthetase [Brucella sp. F5/99] gi|261222010|ref|ZP_05936291.1| prolyl-tRNA synthetase [Brucella ceti B1/94] gi|261314427|ref|ZP_05953624.1| prolyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|261317474|ref|ZP_05956671.1| prolyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|261758028|ref|ZP_06001737.1| prolyl-tRNA synthetase [Brucella sp. F5/99] gi|265988510|ref|ZP_06101067.1| prolyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] gi|265997974|ref|ZP_06110531.1| prolyl-tRNA synthetase [Brucella ceti M490/95/1] gi|189083490|sp|B0CLE9|SYP_BRUSI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|163673818|gb|ABY37929.1| prolyl-tRNA synthetase [Brucella suis ATCC 23445] gi|260920594|gb|EEX87247.1| prolyl-tRNA synthetase [Brucella ceti B1/94] gi|261296697|gb|EEY00194.1| prolyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|261303453|gb|EEY06950.1| prolyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|261738012|gb|EEY26008.1| prolyl-tRNA synthetase [Brucella sp. F5/99] gi|262552442|gb|EEZ08432.1| prolyl-tRNA synthetase [Brucella ceti M490/95/1] gi|264660707|gb|EEZ30968.1| prolyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] Length = 442 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 261/441 (59%), Positives = 338/441 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR ++ M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQEREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKPGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 361 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 420 Query: 421 RLTGIREDMSLEEVINYASHR 441 R TG R+ + +E IN + + Sbjct: 421 RKTGERQSLGIEAAINMLTAQ 441 >gi|225627317|ref|ZP_03785354.1| prolyl-tRNA synthetase [Brucella ceti str. Cudo] gi|225617322|gb|EEH14367.1| prolyl-tRNA synthetase [Brucella ceti str. Cudo] Length = 445 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 261/441 (59%), Positives = 338/441 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 4 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 63 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR ++ M++GPT+EE++TDIFRS Sbjct: 64 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQEREMLFGPTNEEMVTDIFRS 123 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 124 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 183 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 184 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 243 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 244 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 303 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 304 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKPGDEG 363 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 364 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 423 Query: 421 RLTGIREDMSLEEVINYASHR 441 R TG R+ + +E IN + + Sbjct: 424 RKTGERQSLGIEAAINMLTAQ 444 >gi|114799658|ref|YP_760468.1| prolyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444] gi|123323241|sp|Q0C1C5|SYP_HYPNA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114739832|gb|ABI77957.1| prolyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444] Length = 439 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 249/439 (56%), Positives = 329/439 (74%), Gaps = 2/439 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK+FLP+ +E P DA I SH+LMLRTGMI Q+ GIYSWLPLG + L + I+REE Sbjct: 1 MRLSKFFLPVSKEAPADAAIVSHQLMLRTGMIRQNGAGIYSWLPLGYRVLKRIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIEM +PTLQ ADLW ESGRYD YGKEMLR+ DR+++ M+YGPT+EE++TD+FR+ Sbjct: 61 MNRAGAIEMLMPTLQQADLWRESGRYDDYGKEMLRIKDRHERDMLYGPTNEELITDVFRT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ LP Y Q KFRDE+RPRFGVMR REFLMKDAYSFDLT E ++ +Y KMF + Sbjct: 121 YVKSYKQLPLNLYHQQWKFRDEVRPRFGVMRGREFLMKDAYSFDLTEEDARAAYRKMFCA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL F R+GL +IPMRA++GPIGGDLSHEFI+LADTGE+ VFC K +D P P + DF+ Sbjct: 181 YLNAFDRMGLTAIPMRADTGPIGGDLSHEFIILADTGESAVFCDKALLDLPAPGLDLDFE 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L V + T YAAT ++H+E F++LPE++RVSARGIEVGHIF+FGTKYS PM+A Sbjct: 241 S--DLTPFVTERTGYYAATEEMHDEAAFNALPEDRRVSARGIEVGHIFFFGTKYSKPMNA 298 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DG+ VQMGSYGIG R++ A+IE+ HD GI+WP+SVAPF + LIN++ ++ Sbjct: 299 VVQGPDGQMVPVQMGSYGIGVSRLLGAIIEACHDENGIVWPESVAPFDVGLINMRPGNEA 358 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C AC +YA L+ G +V +D+ ++ G++FA DL+G P Q VG + V++ KVE+K+ Sbjct: 359 CDAACNTLYAALTAAGREVLYDETDDRAGAKFARMDLIGLPWQTTVGPRGVTEGKVEVKN 418 Query: 421 RLTGIREDMSLEEVINYAS 439 R TG + D+ +E+++ Sbjct: 419 RKTGEKHDVKIEDMLAQLK 437 >gi|260462251|ref|ZP_05810495.1| prolyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075] gi|259032111|gb|EEW33378.1| prolyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075] Length = 442 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 269/438 (61%), Positives = 340/438 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENPR+AEI SH+LMLR GMI Q +G +SWLPLG++ LD V IIREE Sbjct: 1 MRLSRYFLPILKENPREAEIVSHRLMLRAGMIRQQGQGSFSWLPLGKRVLDKVCQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA+E+ +PT+QSADLW ESGRYD YGKEMLR+ DR D+ M+YGPT+EEV+T+I R+ Sbjct: 61 QNRAGALEILMPTIQSADLWRESGRYDDYGKEMLRIKDRQDRDMLYGPTNEEVVTEIVRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +YN+MFVS Sbjct: 121 YVKSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDFEGAKAAYNRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LADTGE+QV+C +D++ +P ENTDF Sbjct: 181 YLRTFTRMGLQAIPMRADTGPIGGDLSHEFIILADTGESQVYCDRDYLSLQVPGENTDFA 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + IV+ WT PYAAT ++H++ +D L E RVSARGIEVGHIF+FG KYS PM A Sbjct: 241 NDGEIADIVKTWTTPYAATDEMHDQAAWDKLGEADRVSARGIEVGHIFHFGDKYSKPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGKDH+V GSYGIG R+VAA+IE+SHD GIIWP++VAPF I +IN+K D Sbjct: 301 KVTGPDGKDHFVSGGSYGIGPSRLVAAIIEASHDENGIIWPEAVAPFDIGVINMKVGDAD 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C C+++YA + G DV +DD ++ G +FA ADL+G P QVIVG + V+ +VEIK+ Sbjct: 361 CDRVCDELYAAFADAGKDVLYDDTDQRPGGKFATADLIGLPWQVIVGPRGVAAGEVEIKN 420 Query: 421 RLTGIREDMSLEEVINYA 438 R TG RE + + E Sbjct: 421 RKTGERETLPIAEAKKRF 438 >gi|240137564|ref|YP_002962035.1| proline-tRNA ligase [Methylobacterium extorquens AM1] gi|240007532|gb|ACS38758.1| proline-tRNA ligase [Methylobacterium extorquens AM1] Length = 442 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 255/441 (57%), Positives = 334/441 (75%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GMI Q + GIY+WLPLG + L+ V ++R E Sbjct: 2 MRLSRYFLPILRETPKEAEIVSHRLMLRAGMIRQEAAGIYAWLPLGLRVLNKVCDVVRAE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GAIE+ +PT+Q+ADLW ESGRY++YGKEMLRL DR+++ ++YGPT EEV+T+IFR+ Sbjct: 62 QDRAGAIEILMPTIQAADLWRESGRYEAYGKEMLRLKDRHERELLYGPTAEEVVTEIFRA 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SY++LP YQI KFRDE+RPRFG MRSREFLMKD YSFD+ ++HSYNK+FVS Sbjct: 122 STRSYKDLPKNLYQISWKFRDEVRPRFGTMRSREFLMKDGYSFDIDQAAARHSYNKVFVS 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGL++IPMRA++GPIGGDLSHEFI+LA TGE++VFC + ++D P+P + DFD Sbjct: 182 YLRTFERLGLRAIPMRADTGPIGGDLSHEFIILAKTGESEVFCDQAYLDMPVPPPSVDFD 241 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ L +V+ WT+ YAAT ++H+E +F +PE R+SARGIEVGHIFYFGTKYS PM A Sbjct: 242 DVAGLQGVVDAWTSHYAATDEMHDEAVFAEVPEASRLSARGIEVGHIFYFGTKYSTPMKA 301 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG + V MGSYGIG R+VAA IE+SHD GIIWPD++APF ++LIN+K D Sbjct: 302 VVTGPDGSERPVHMGSYGIGPSRLVAATIEASHDEAGIIWPDAIAPFDVALINLKVGDGA 361 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C AC +I A L G V +DD E+ G++FA ADL+G P QVIVG K +++ K+E+K Sbjct: 362 CDTACAEIQAALETAGLSVLYDDRDERPGAKFATADLIGLPWQVIVGPKGLAEGKIELKR 421 Query: 421 RLTGIREDMSLEEVINYASHR 441 R +G RE + ++ Sbjct: 422 RASGERETLDPVDLPARIRRL 442 >gi|306843758|ref|ZP_07476357.1| prolyl-tRNA synthetase [Brucella sp. BO1] gi|306275949|gb|EFM57662.1| prolyl-tRNA synthetase [Brucella sp. BO1] Length = 442 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 259/441 (58%), Positives = 338/441 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR ++ M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQEREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + +++ +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLNLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GI+WP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIVWPKAIAPFGAGIVNMKPGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 361 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 420 Query: 421 RLTGIREDMSLEEVINYASHR 441 R TG R+ + +E IN + + Sbjct: 421 RKTGERQSLGIEAAINMLTAQ 441 >gi|167646774|ref|YP_001684437.1| prolyl-tRNA synthetase [Caulobacter sp. K31] gi|189083491|sp|B0SZ28|SYP_CAUSK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|167349204|gb|ABZ71939.1| prolyl-tRNA synthetase [Caulobacter sp. K31] Length = 445 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 255/441 (57%), Positives = 325/441 (73%), Gaps = 2/441 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P DA+I SH+LMLR GMI Q + GIY+WLPLG + L V I+REE Sbjct: 1 MRLSRYFLPVLKEAPSDAQIVSHQLMLRAGMIRQEAAGIYAWLPLGLRVLKKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GAIE+ +PT+Q ADLW ESGRYD YG EMLR+ DR+ + ++YGPT EEV+TDIFR+ Sbjct: 61 MDRAGAIELLMPTIQLADLWRESGRYDDYGDEMLRITDRHKRDLLYGPTAEEVVTDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFDL EG++ +YN+MFV+ Sbjct: 121 SVKSYKDLPKNLYNIQWKFRDERRPRFGVMRGREFLMKDAYSFDLDAEGARKAYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL +F R+GLK++PMRA++GPIGGDLSHEFIVLA+TGE+ VFC KD ++ P + D+ Sbjct: 181 YLNLFSRMGLKAVPMRADTGPIGGDLSHEFIVLAETGESAVFCHKDLVEMAAPGPDIDWY 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L +V + TA YAAT ++H+E F +LPE R+SARGIEVGHIF FGTKYS PM A Sbjct: 241 --GDLQPLVNERTALYAATEEMHDEAAFAALPEGDRLSARGIEVGHIFSFGTKYSEPMKA 298 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGKD VQMGSYG+G R++ A+IE+SHD GIIWP+SVAPF + +IN++ D Sbjct: 299 LVTGPDGKDVPVQMGSYGVGVSRLLGAIIEASHDEGGIIWPESVAPFDVGVINMRQGDAA 358 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C +ACE Y L G DV +DD + G++FA DL+G P Q+IVG K +++ VE+K+ Sbjct: 359 CDEACETAYKALQAAGRDVLYDDNDTRGGAKFATMDLIGVPWQLIVGPKGIAEGVVELKN 418 Query: 421 RLTGIREDMSLEEVINYASHR 441 R TG R L EVI S + Sbjct: 419 RKTGERHSAPLAEVIAQLSAQ 439 >gi|254689076|ref|ZP_05152330.1| prolyl-tRNA synthetase [Brucella abortus bv. 6 str. 870] gi|254693559|ref|ZP_05155387.1| prolyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya] gi|256257325|ref|ZP_05462861.1| prolyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] gi|260754574|ref|ZP_05866922.1| prolyl-tRNA synthetase [Brucella abortus bv. 6 str. 870] gi|260883601|ref|ZP_05895215.1| prolyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] gi|261213824|ref|ZP_05928105.1| prolyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya] gi|297248174|ref|ZP_06931892.1| prolyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196] gi|260674682|gb|EEX61503.1| prolyl-tRNA synthetase [Brucella abortus bv. 6 str. 870] gi|260873129|gb|EEX80198.1| prolyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] gi|260915431|gb|EEX82292.1| prolyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya] gi|297175343|gb|EFH34690.1| prolyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196] Length = 442 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 261/441 (59%), Positives = 337/441 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR + M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQKREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKTIAPFGAGIVNMKPGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 361 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 420 Query: 421 RLTGIREDMSLEEVINYASHR 441 R TG R+ + +E IN + + Sbjct: 421 RKTGERQSLGIEAAINMLTAQ 441 >gi|256369253|ref|YP_003106761.1| prolyl-tRNA synthetase [Brucella microti CCM 4915] gi|255999413|gb|ACU47812.1| prolyl-tRNA synthetase [Brucella microti CCM 4915] Length = 442 Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 260/441 (58%), Positives = 337/441 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEML + DR ++ M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLCIQDRQEREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKPGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 361 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 420 Query: 421 RLTGIREDMSLEEVINYASHR 441 R TG R+ + +E IN + + Sbjct: 421 RKTGERQSLGIEAAINMLTAQ 441 >gi|328543706|ref|YP_004303815.1| Prolyl-tRNA synthetase [polymorphum gilvum SL003B-26A1] gi|326413449|gb|ADZ70512.1| Prolyl-tRNA synthetase [Polymorphum gilvum SL003B-26A1] Length = 442 Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 255/442 (57%), Positives = 333/442 (75%), Gaps = 2/442 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+E P++AEI SH+LMLR GMI Q S GIYSWLPLG + L + I+ EE Sbjct: 1 MRLSRFFLPILKETPKEAEIVSHRLMLRAGMIRQQSAGIYSWLPLGFRVLRKIEKIVEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GA+++ +PT+Q ADLW ESGRYD+YGKEMLR+ DR+++ M+YGPT+EE++T+IFRS Sbjct: 61 QARAGAVQLLMPTIQPADLWRESGRYDAYGKEMLRITDRHEREMLYGPTNEEMITEIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFG+MR REFLMKDAYSFD+ E ++H+YN+MFV+ Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGIMRGREFLMKDAYSFDIDKEAARHAYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRA++GPIGGD+SHEFI+LA TGE+ VFC + +D P P E+TDF Sbjct: 181 YLRTFARMGLKAIPMRADTGPIGGDMSHEFIILASTGESAVFCDRSLLDLPTPGEDTDF- 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L+ IVE WT PYAAT ++H+E F +LPE +RVSARGIEVGHIFYFGTKYS PM A Sbjct: 240 -LSDLSPIVEAWTTPYAATDEMHDETTFAALPEAERVSARGIEVGHIFYFGTKYSEPMGA 298 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 A+G + V MGSYG+G R++ A+IE++HD GIIWP SVAPF + LIN+K D Sbjct: 299 RVMTAEGTEVPVHMGSYGVGVSRLLGALIEANHDDDGIIWPASVAPFHVGLINLKPGDAD 358 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC +YARL VG +V +DD+ + G++FA DL+G P Q+I G + + D VE+K Sbjct: 359 TDSACAGLYARLEAVGVEVLYDDVDTRAGAKFATMDLIGLPFQIIAGPRGLKDGVVEVKE 418 Query: 421 RLTGIREDMSLEEVINYASHRF 442 R +G RE +SLE N Sbjct: 419 RASGQRESLSLEAAFNRVREAL 440 >gi|256060932|ref|ZP_05451090.1| prolyl-tRNA synthetase [Brucella neotomae 5K33] gi|261324932|ref|ZP_05964129.1| prolyl-tRNA synthetase [Brucella neotomae 5K33] gi|261300912|gb|EEY04409.1| prolyl-tRNA synthetase [Brucella neotomae 5K33] Length = 442 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 261/441 (59%), Positives = 337/441 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR ++ M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQEREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA TGE+QV+C + ++D +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAGTGESQVYCDRAYLDLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKLGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 361 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 420 Query: 421 RLTGIREDMSLEEVINYASHR 441 R TG R+ + +E IN + + Sbjct: 421 RKTGERQSLGIEAAINMLTAQ 441 >gi|220924023|ref|YP_002499325.1| prolyl-tRNA synthetase [Methylobacterium nodulans ORS 2060] gi|254782908|sp|B8IUW4|SYP_METNO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|219948630|gb|ACL59022.1| prolyl-tRNA synthetase [Methylobacterium nodulans ORS 2060] Length = 443 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 257/439 (58%), Positives = 339/439 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GMI Q + GIY+WLPLG + L+ V +IR E Sbjct: 1 MRLSRYFLPILRETPKEAEIVSHRLMLRAGMIRQEAAGIYAWLPLGLRVLNRVTEVIRAE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R+GAIE+ +PT+QSA+LW ESGRY++YGKEMLR+ DR+++ M++GPT+EE++T IFRS Sbjct: 61 QDRSGAIELLMPTIQSAELWRESGRYEAYGKEMLRIRDRHEREMLFGPTNEEMITAIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY++LP Y IQ KFRDE+RPRFG MRSREFLMKDAYSFDL G++H+YNKMFV+ Sbjct: 121 AVRSYKDLPKNLYHIQWKFRDEVRPRFGTMRSREFLMKDAYSFDLDEAGARHAYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGLK+IPMRAE+GPIGG+LSHEFI+LA TGE++VFC + ++ FPIP + DFD Sbjct: 181 YLRTFARLGLKAIPMRAETGPIGGNLSHEFIILAQTGESEVFCDRAYLGFPIPPASIDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ +L + V+ WT+ YAATS++H F+++PE R++ARGIEVGHIFYFGTKYS PM A Sbjct: 241 DVAALQATVDHWTSRYAATSEMHEPAAFEAVPEEARMAARGIEVGHIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG++ V MGSYGIG R+VAA+IE+SHD GI+WPDSVAPF ++L+N+K D Sbjct: 301 RVTGPDGQERPVHMGSYGIGPSRLVAAIIEASHDEAGIVWPDSVAPFDVALLNLKVGDAA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC K+ L G V DD E+ G++FA ADL+G P QVIVG K +++ +E+K Sbjct: 361 TDAACAKLQEELEAAGLTVLTDDRDERPGAKFATADLIGLPWQVIVGPKGLAEGTIELKR 420 Query: 421 RLTGIREDMSLEEVINYAS 439 R TG RE ++++ V Sbjct: 421 RATGEREIVAVDAVAPRLR 439 >gi|254701588|ref|ZP_05163416.1| prolyl-tRNA synthetase [Brucella suis bv. 5 str. 513] gi|261752141|ref|ZP_05995850.1| prolyl-tRNA synthetase [Brucella suis bv. 5 str. 513] gi|261741894|gb|EEY29820.1| prolyl-tRNA synthetase [Brucella suis bv. 5 str. 513] Length = 442 Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats. Identities = 261/441 (59%), Positives = 337/441 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR ++ M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQEREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKPGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 361 CDGVSEKFYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 420 Query: 421 RLTGIREDMSLEEVINYASHR 441 R TG R+ + +E IN + + Sbjct: 421 RKTGERQSLGIEAAINMLTAQ 441 >gi|154253644|ref|YP_001414468.1| prolyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1] gi|171769681|sp|A7HY28|SYP_PARL1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|154157594|gb|ABS64811.1| prolyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1] Length = 439 Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats. Identities = 245/440 (55%), Positives = 330/440 (75%), Gaps = 3/440 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP L+ENP +A+IASH+LMLR GM+ Q + GIY+WLPLG L + I+R+E Sbjct: 1 MRLSRYFLPTLKENPAEAQIASHRLMLRAGMVRQTAAGIYAWLPLGLAVLRKIEGIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GAIE+ +PTLQSADLW +SGRYD+YG EMLR+ DR+++ M+YGPT+EE++TDIFR Sbjct: 61 QKRAGAIELLMPTLQSADLWRQSGRYDAYGPEMLRIVDRHERDMLYGPTNEEMITDIFRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR+LP + IQ KFRDE+RPRFGVMR REFLMKD YSFDL EG++ +Y KMFVS Sbjct: 121 AVRSYRDLPRNLFHIQWKFRDEIRPRFGVMRGREFLMKDGYSFDLDVEGARRAYRKMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPM A++GPIGGD+SHEFI+LA+TGE+ VFC +D +D +P ++ D++ Sbjct: 181 YLRSFARMGLKAIPMAADTGPIGGDMSHEFIILAETGESAVFCHRDLVDMAVPGDDIDYE 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 LN ++ T YAAT + H+ FD+ +P++K++SARGIEVGHIF+FGTKYS M Sbjct: 241 T--DLNPVIAARTDLYAATDEKHDAAKFDAEVPKDKQLSARGIEVGHIFFFGTKYSQSMG 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DGK+ VQMGSYGIG R+V A+IE+SHD GI+WPD+VAPF + LIN+K+ D Sbjct: 299 ALVTGPDGKEVPVQMGSYGIGVSRLVGAIIEASHDDAGIVWPDAVAPFTVGLINLKSGDA 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACE IY +L+ G DV +DD E+ G++F+ DL+G P Q+++G + + VE+K Sbjct: 359 ETDAACESIYEKLTAQGIDVLYDDTDERAGAKFSNMDLIGLPWQLVIGPRGLKSGTVELK 418 Query: 420 HRLTGIREDMSLEEVINYAS 439 R TG +E++S E + + Sbjct: 419 RRATGEKEELSPEAALAKIA 438 >gi|62289771|ref|YP_221564.1| prolyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941] gi|82699699|ref|YP_414273.1| prolyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308] gi|189024014|ref|YP_001934782.1| prolyl-tRNA synthetase [Brucella abortus S19] gi|254697210|ref|ZP_05159038.1| prolyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260545481|ref|ZP_05821222.1| prolyl-tRNA synthetase [Brucella abortus NCTC 8038] gi|260761620|ref|ZP_05873963.1| prolyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|81309431|sp|Q57DT1|SYP_BRUAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114152174|sp|Q2YNE3|SYP_BRUA2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226699122|sp|B2S561|SYP_BRUA1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|62195903|gb|AAX74203.1| ProS, prolyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941] gi|82615800|emb|CAJ10798.1| tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase, class IIa:Anticodon binding domain:Prolyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308] gi|189019586|gb|ACD72308.1| prolyl-tRNA synthetase [Brucella abortus S19] gi|260096888|gb|EEW80763.1| prolyl-tRNA synthetase [Brucella abortus NCTC 8038] gi|260672052|gb|EEX58873.1| prolyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59] Length = 442 Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats. Identities = 260/441 (58%), Positives = 337/441 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR + M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQKREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKTIAPFGAGIVNMKPGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 361 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 420 Query: 421 RLTGIREDMSLEEVINYASHR 441 R TG R+ + ++ IN + + Sbjct: 421 RKTGERQSLGIKAAINMLTAQ 441 >gi|237815257|ref|ZP_04594255.1| prolyl-tRNA synthetase [Brucella abortus str. 2308 A] gi|237790094|gb|EEP64304.1| prolyl-tRNA synthetase [Brucella abortus str. 2308 A] Length = 445 Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats. Identities = 260/441 (58%), Positives = 337/441 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 4 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 63 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR + M++GPT+EE++TDIFRS Sbjct: 64 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQKREMLFGPTNEEMVTDIFRS 123 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 124 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 183 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 184 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 243 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 244 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 303 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 304 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKTIAPFGAGIVNMKPGDEG 363 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 364 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 423 Query: 421 RLTGIREDMSLEEVINYASHR 441 R TG R+ + ++ IN + + Sbjct: 424 RKTGERQSLGIKAAINMLTAQ 444 >gi|225852336|ref|YP_002732569.1| prolyl-tRNA synthetase [Brucella melitensis ATCC 23457] gi|256044499|ref|ZP_05447403.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|256113355|ref|ZP_05454213.1| prolyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] gi|256264165|ref|ZP_05466697.1| prolyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9] gi|260563853|ref|ZP_05834339.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|265990923|ref|ZP_06103480.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|265994761|ref|ZP_06107318.1| prolyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] gi|114152175|sp|Q8YGL8|SYP_BRUME RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782889|sp|C0RIF7|SYP_BRUMB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|225640701|gb|ACO00615.1| prolyl-tRNA synthetase [Brucella melitensis ATCC 23457] gi|260153869|gb|EEW88961.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|262765874|gb|EEZ11663.1| prolyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] gi|263001707|gb|EEZ14282.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|263094383|gb|EEZ18228.1| prolyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9] gi|326408844|gb|ADZ65909.1| prolyl-tRNA synthetase [Brucella melitensis M28] gi|326538559|gb|ADZ86774.1| prolyl-tRNA synthetase [Brucella melitensis M5-90] Length = 442 Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats. Identities = 260/441 (58%), Positives = 336/441 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR + M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQKREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L V +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDTVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKTIAPFGAGIVNMKPGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 361 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATIDLIGLPTQVIVGPRGVAAGEVEVKD 420 Query: 421 RLTGIREDMSLEEVINYASHR 441 R TG R+ + +E IN + + Sbjct: 421 RKTGERQSLGIEAAINMLTAQ 441 >gi|17987423|ref|NP_540057.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|17983114|gb|AAL52321.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] Length = 445 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 260/441 (58%), Positives = 336/441 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 4 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 63 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR + M++GPT+EE++TDIFRS Sbjct: 64 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQKREMLFGPTNEEMVTDIFRS 123 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 124 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 183 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 184 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 243 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L V +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 244 NDAQLTDTVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 303 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 304 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKTIAPFGAGIVNMKPGDEG 363 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 364 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATIDLIGLPTQVIVGPRGVAAGEVEVKD 423 Query: 421 RLTGIREDMSLEEVINYASHR 441 R TG R+ + +E IN + + Sbjct: 424 RKTGERQSLGIEAAINMLTAQ 444 >gi|163759522|ref|ZP_02166607.1| prolyl-tRNA synthetase [Hoeflea phototrophica DFL-43] gi|162283119|gb|EDQ33405.1| prolyl-tRNA synthetase [Hoeflea phototrophica DFL-43] Length = 447 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 275/445 (61%), Positives = 343/445 (77%), Gaps = 5/445 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKYFLPIL+ENP+DAEI SH+LM R GMI Q S GIYSWLPLG++ LD V I+REE Sbjct: 1 MRLSKYFLPILKENPKDAEIVSHRLMARAGMIKQQSAGIYSWLPLGKRVLDKVCNIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PT+Q ADLW ESGRYD YG+EMLR+ DRND+ M++GPT+EE++TDIFRS Sbjct: 61 QNRAGAIEILMPTIQPADLWRESGRYDDYGQEMLRINDRNDREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFDL E SK +YN+MFVS Sbjct: 121 YVKSYKDLPLNLYHIQWKFRDERRPRFGVMRGREFLMKDAYSFDLDYEASKAAYNRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R GLKSIPMRA++GPIGG LSHEFIVLA+TGE+QVFC +DF F +P + ++D Sbjct: 181 YLRTFERCGLKSIPMRADTGPIGGSLSHEFIVLAETGESQVFCHRDFDGFAVPPVDMNYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL-----FDSLPENKRVSARGIEVGHIFYFGTKYS 295 D ++ ++VEQWT P+AAT ++ +++ +D L E+ RVSARGIEVGHIF+FGTKYS Sbjct: 241 DAAAVAAVVEQWTTPFAATDEIMDKEEWAREAWDGLGEDARVSARGIEVGHIFHFGTKYS 300 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 PM+A +G DGK HYV MGSYGIG R++ A+IE+SHD GIIWP VAPF + LIN+K Sbjct: 301 EPMNAFVQGPDGKQHYVSMGSYGIGPSRLLGAIIEASHDENGIIWPKGVAPFDVGLINMK 360 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 D C ACE+I L G ++ +DD E+ G++FA ADL+G P+QVI G + V+D Sbjct: 361 PGDAACDAACERIETALENAGIELLYDDTDERAGAKFAKADLIGLPIQVIAGPRAVADGN 420 Query: 416 VEIKHRLTGIREDMSLEEVINYASH 440 VEIK R TG RE +S++E IN + Sbjct: 421 VEIKVRATGERETLSIDEAINRLAQ 445 >gi|27379988|ref|NP_771517.1| prolyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110] gi|81841648|sp|Q89KM8|SYP_BRAJA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|27353142|dbj|BAC50142.1| prolyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110] Length = 439 Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 251/439 (57%), Positives = 332/439 (75%), Gaps = 3/439 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+ENP++AEI SH+LMLR GMI Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLSRFFLPILKENPKEAEIVSHRLMLRAGMIRQEAAGIYAWLPLGFRVLKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R+GA+E+ +PTLQ ADLW ESGRYD+YG EMLR+ADR+ + ++YGPT+EE++T+IFR+ Sbjct: 61 QDRSGALELLMPTLQLADLWRESGRYDAYGPEMLRIADRHKRELLYGPTNEEMITEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+NLP Y IQ KFRDE RPRFGVMR REFLMKDAYSFDL ++ +YNKMFV+ Sbjct: 121 YVKSYKNLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDLNEAAARVAYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLA+TGE+ VF ++D +D P+P E+ D++ Sbjct: 181 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVFINRDVLDLPVPGEDVDYE 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L I++QWT+ YAAT DVH+ F+ +PE KR++ RGIEVG IFYFGTKYS PM Sbjct: 241 S--DLTPIIKQWTSVYAATEDVHDAARFEQEVPEAKRLNTRGIEVGQIFYFGTKYSEPMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG D + GSYG+G R++ A+IE+ HD GI WP++VAPF+ ++N+K D Sbjct: 299 AMVAGPDGVDVPIHGGSYGVGVSRLLGAIIEACHDDAGIKWPEAVAPFRAVVLNLKQGDA 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACEK+YA L G DV +DD ++ G++FA ADL+G P Q+++G K ++D KVE+K Sbjct: 359 AVDAACEKLYAELQAKGVDVLYDDTDQRAGAKFAAADLIGIPWQIMIGPKGLADGKVELK 418 Query: 420 HRLTGIREDMSLEEVINYA 438 R G RE MS + + Sbjct: 419 RRSDGSRETMSPADAVARL 437 >gi|83858393|ref|ZP_00951915.1| prolyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633] gi|83853216|gb|EAP91068.1| prolyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633] Length = 442 Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 246/441 (55%), Positives = 323/441 (73%), Gaps = 4/441 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P DA+I SH+LMLR GMI Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLSRYFLPVLKETPSDAQIVSHQLMLRAGMIRQEAAGIYAWLPLGLRVLRKIEKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GAIE+ +PTLQ ADLW ESGRYD YGKEMLR+ DR+++ ++YGPT+EE++T+IFR Sbjct: 61 QDRAGAIELLMPTLQPADLWRESGRYDDYGKEMLRIVDRHERDLLYGPTNEEMITEIFRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + +SY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFDL EG+ +YNKMFV+ Sbjct: 121 YCRSYKDLPKILYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDLDYEGAVKAYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL F R+GLKS+PMRA++GPIGG LSHEFI+LA+TGE++VFC +D P P E D Sbjct: 181 YLNTFARMGLKSVPMRADTGPIGGKLSHEFIILAETGESEVFCDSRLVDMPAPGE---VD 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L V+Q TA YAAT ++H+ F++ +PE +R+SARGIEVGHIF FGTKYS PM Sbjct: 238 FDGDLQPYVDQRTALYAATEEMHDAARFEAEVPEERRLSARGIEVGHIFNFGTKYSDPMK 297 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DGK+ V MGSYG+G R++ A+IE+SHD G+IWP++VAPF +IN++A D Sbjct: 298 AQVAGPDGKETAVHMGSYGVGVSRLLGAIIEASHDENGVIWPEAVAPFGAGVINMRAGDA 357 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 C A ++IY +L G + DD G++FA DL+G P QVIVG + + + K E+K Sbjct: 358 DCAKAADEIYTKLDAAGLEPLLDDTAASAGAKFATMDLIGVPYQVIVGPRGLKEGKAEVK 417 Query: 420 HRLTGIREDMSLEEVINYASH 440 R +G R ++SLE+ +N Sbjct: 418 IRASGERHELSLEDAVNRLVE 438 >gi|170748459|ref|YP_001754719.1| prolyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831] gi|226701311|sp|B1LUL8|SYP_METRJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|170654981|gb|ACB24036.1| prolyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831] Length = 441 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 254/439 (57%), Positives = 334/439 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+P L+E P++AEI SH+LMLR G++ Q + GIY+WLPLG + L+ V A+IR E Sbjct: 1 MRLSRYFMPTLRETPKEAEIVSHRLMLRAGLVRQEAAGIYAWLPLGLRVLERVCAVIRRE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R+GA+E+ +PT+QSA+LW ESGRYD+YGKEMLRL DR+D+ M+YGPT EE++T+IFR+ Sbjct: 61 QDRSGAVEILMPTVQSAELWRESGRYDAYGKEMLRLKDRHDREMLYGPTAEEMVTEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY++LP YQI KFRDE+RPRFG MRSREFLMKDAYSFD G++H+YN+MFV+ Sbjct: 121 SVRSYKDLPKNLYQISWKFRDEVRPRFGTMRSREFLMKDAYSFDFDQAGARHAYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F LGLK+IPMRA++GPIGGDLSHEFI+LA TGE++VFC K ++ F IP DFD Sbjct: 181 YLRTFAGLGLKAIPMRADTGPIGGDLSHEFIILAKTGESEVFCDKAYLGFDIPPATVDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ +L IV+ WT+ YAAT ++H F +PE+ R++ARGIEVGHIFYFGTKYS PM A Sbjct: 241 DVAALQGIVDAWTSHYAATEEMHEPAAFAEVPEDSRMAARGIEVGHIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG + V MGSYGIG R+VAA+IE+SHD GIIWPD+VAPF ++LIN+K D Sbjct: 301 KVAGPDGIERPVHMGSYGIGPSRLVAAIIEASHDEAGIIWPDAVAPFDVALINLKVGDSA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC +I + L G V +DD E+ G++FA ADL+G P QVIVG K +++ KVE+K Sbjct: 361 TEAACAQIQSDLEAAGLSVLYDDRDERPGAKFATADLIGLPWQVIVGPKGLAEGKVELKR 420 Query: 421 RLTGIREDMSLEEVINYAS 439 R G RE ++ +++ Sbjct: 421 RAGGERESLATVDLLARIR 439 >gi|161618786|ref|YP_001592673.1| prolyl-tRNA synthetase [Brucella canis ATCC 23365] gi|254704135|ref|ZP_05165963.1| prolyl-tRNA synthetase [Brucella suis bv. 3 str. 686] gi|260566616|ref|ZP_05837086.1| prolyl-tRNA synthetase [Brucella suis bv. 4 str. 40] gi|261754801|ref|ZP_05998510.1| prolyl-tRNA synthetase [Brucella suis bv. 3 str. 686] gi|189083489|sp|A9MAJ9|SYP_BRUC2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|161335597|gb|ABX61902.1| prolyl-tRNA synthetase [Brucella canis ATCC 23365] gi|260156134|gb|EEW91214.1| prolyl-tRNA synthetase [Brucella suis bv. 4 str. 40] gi|261744554|gb|EEY32480.1| prolyl-tRNA synthetase [Brucella suis bv. 3 str. 686] Length = 442 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 260/441 (58%), Positives = 337/441 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR ++ M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQEREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKPGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 361 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 420 Query: 421 RLTGIREDMSLEEVINYASHR 441 R G R+ + +E IN + + Sbjct: 421 RKMGERQSLGIEAAINMLTAQ 441 >gi|323139097|ref|ZP_08074155.1| prolyl-tRNA synthetase [Methylocystis sp. ATCC 49242] gi|322395661|gb|EFX98204.1| prolyl-tRNA synthetase [Methylocystis sp. ATCC 49242] Length = 447 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 264/446 (59%), Positives = 339/446 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR G+I Q S GIY+WLPLG K L+N+ IIREE Sbjct: 1 MRLSRYFLPILRETPKEAEIVSHRLMLRAGLIRQESAGIYAWLPLGLKVLNNITRIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE +PT+QSADLW ESGRYD+YGKEMLR+ DR+D+ M++GPT+EE++T+IFR+ Sbjct: 61 QNRAGAIECLMPTIQSADLWRESGRYDAYGKEMLRITDRHDREMLFGPTNEEMITEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDLT E +HSYN+MFV+ Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLTAEAGRHSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL +IPM AESGPIGG+LSHEFI+LA+TGE++VFC KDF+ F P N DFD Sbjct: 181 YLRTFARMGLTAIPMAAESGPIGGNLSHEFIILAETGESEVFCHKDFLSFAPPPANVDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D +L IV +WT+ YAATS++H+ ++++PE RVSARGIEVGHIFYFGTKYS PM A Sbjct: 241 DAPALEEIVGKWTSRYAATSEMHDAAAYEAVPEASRVSARGIEVGHIFYFGTKYSEPMKA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK+ VQMGSYGIG R+VAA+IE+ HD GI+WP+ VAPF + + ++K D Sbjct: 301 VVNGPDGKEVVVQMGSYGIGPSRLVAAIIEAGHDEAGIVWPEQVAPFHVGVADLKVGDAN 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C + +L G DV DD E+ G++FA DL+G P Q++VG K +++ +VE+K Sbjct: 361 TGRVCGDLVQQLENAGLDVLHDDRDERPGAKFATLDLIGLPWQILVGPKGLAEGRVEVKR 420 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R TG RE +S E+V+ R Sbjct: 421 RRTGERELLSPEDVVARIVEAVKQAR 446 >gi|254502934|ref|ZP_05115085.1| prolyl-tRNA synthetase [Labrenzia alexandrii DFL-11] gi|222439005|gb|EEE45684.1| prolyl-tRNA synthetase [Labrenzia alexandrii DFL-11] Length = 442 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 248/444 (55%), Positives = 335/444 (75%), Gaps = 2/444 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GMI Q S GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPILKETPKEAEIVSHRLMLRAGMIRQQSAGIYSWLPLGLKVLRKIERIVEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GA+++ +PT+Q ADLW ESGRYD+YGKEMLR+ DR+++ M++GPT+EE++TDIFRS Sbjct: 61 QARAGAVQLLMPTIQPADLWRESGRYDAYGKEMLRITDRHEREMLFGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFG+MR REFLMKDAYSFDL E ++H+YN+MFV+ Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGIMRGREFLMKDAYSFDLDQETARHAYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPM+A++GPIGGDLSHEFI+LA+TGE++VF K ++ PIP+++TDF Sbjct: 181 YLRTFDRMGLKAIPMKADTGPIGGDLSHEFIILAETGESEVFLDKSLLEMPIPAKDTDFW 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L+ IVE WT PYAAT ++H+E F +L E+ RVSARGIEVGHIFYFGTKYS M A Sbjct: 241 S--DLSPIVESWTTPYAATDEMHDEAAFGALEEDTRVSARGIEVGHIFYFGTKYSDAMGA 298 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 A+G + V MGSYG+G R++ A+IE++HD GIIWP SVAPF + +IN++ D + Sbjct: 299 KVATAEGTEVPVHMGSYGVGVSRLLGALIEANHDEDGIIWPKSVAPFHVGIINMRPGDDL 358 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 CE +YA+L G +V +DD + G++FA DL+G P QV+ G + + D +E+K Sbjct: 359 TDPVCEDLYAKLEAAGIEVLYDDTDSRAGAKFATMDLIGLPFQVVAGPRGLKDGVLEVKD 418 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R TG +E ++ E +N + ++ Sbjct: 419 RATGEKEMLTPEATLNKLTAALTD 442 >gi|91977335|ref|YP_569994.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisB5] gi|123762679|sp|Q135Z6|SYP_RHOPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|91683791|gb|ABE40093.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisB5] Length = 439 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 249/440 (56%), Positives = 333/440 (75%), Gaps = 3/440 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+ENP++AEI SH+LMLR GM+ Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLSRFFLPILKENPKEAEIVSHRLMLRAGMLRQEAAGIYAWLPLGHRVLKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PTLQ ADLW ESGRYD+YG EMLR+ADR+ + ++YGPT+EE++T+IFR+ Sbjct: 61 QNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIADRHKRELLYGPTNEEMITEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ ++ SYN+MFV+ Sbjct: 121 YVKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAAARKSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLA+TGE+ V+C +D ++ P+P E+ D+D Sbjct: 181 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYCDRDVLNLPVPGEDVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L I++QWT+ YAAT DVH+ ++S +PE R++ RGIEVG IFYFGTKYS M Sbjct: 241 --GDLTPIIQQWTSVYAATEDVHDAARYESEVPEANRLNTRGIEVGQIFYFGTKYSDSMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG D + GSYG+G R+V A+IE+ HD GI WP+ VAPF+++++N+K D Sbjct: 299 ANVAGPDGADAPIHGGSYGVGVSRLVGAIIEACHDENGIKWPEEVAPFRVAILNLKQGDA 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACE++Y L+ G DV +DD ++ G++FA ADL+G P QV+VG K ++D KVE+K Sbjct: 359 QTDAACEQLYRELAAKGVDVLYDDTDQRAGAKFATADLIGIPWQVLVGPKGLADGKVELK 418 Query: 420 HRLTGIREDMSLEEVINYAS 439 R G RE ++L E + + Sbjct: 419 RRSDGSRETIALAEAVARLA 438 >gi|254469374|ref|ZP_05082779.1| prolyl-tRNA synthetase [Pseudovibrio sp. JE062] gi|211961209|gb|EEA96404.1| prolyl-tRNA synthetase [Pseudovibrio sp. JE062] Length = 441 Score = 411 bits (1057), Expect = e-112, Method: Composition-based stats. Identities = 255/443 (57%), Positives = 334/443 (75%), Gaps = 3/443 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GMI Q S GIY+WLPLG + L+ + I+ EE Sbjct: 1 MRLSRYFLPILKETPKEAEIVSHRLMLRAGMIRQQSAGIYAWLPLGHRVLNKIQRIVEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR+GA+++ +PT+Q ADLW ESGRYD+YGKEMLR+ DR+++ M++GPT+EE++TDIFRS Sbjct: 61 QNRSGAVQLLMPTIQPADLWRESGRYDAYGKEMLRIEDRHEREMLFGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFDL E S +Y +MFV+ Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDLDKERSTEAYRRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL +IPM+A++GPIGGDLSHEFIVLA TGE++VF KD +D PIP E+TDFD Sbjct: 181 YLRTFARMGLTAIPMKADTGPIGGDLSHEFIVLASTGESEVFLDKDILDLPIPGEDTDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L+ I+EQWT PYAAT ++++E F ++ E+K+VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 --GDLSGIIEQWTTPYAATDEMYDEAAFGAVAEDKKVSARGIEVGHIFHFGTKYSEPMGA 298 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 A+GK+ VQMGSYGIG R++ A+IE+ HD GIIWP VAPF + LIN+KA + Sbjct: 299 KVMTAEGKEVPVQMGSYGIGVSRLLGAIIEACHDDDGIIWPKEVAPFHVGLINMKAGSE- 357 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C + CE +YA L K G +V +DD G +FA DL+G P Q++VG + + +VE+K Sbjct: 358 CDEVCESVYAELEKAGIEVLYDDRKTSAGQKFASMDLIGLPYQLVVGPRGLKTGEVEVKD 417 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R G RE ++ E +N Sbjct: 418 RAAGDREMLTPEAAVNKLISALK 440 >gi|115524551|ref|YP_781462.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisA53] gi|122296196|sp|Q07NK2|SYP_RHOP5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|115518498|gb|ABJ06482.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisA53] Length = 439 Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats. Identities = 241/441 (54%), Positives = 327/441 (74%), Gaps = 3/441 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GM+ Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLSRYFLPILKETPKEAEIVSHRLMLRAGMLRQEAAGIYAWLPLGHRVLKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PTLQ ADLW ESGRYD+YG EMLR+ADR+ + ++YGPT+EE++T+IFR+ Sbjct: 61 QNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIADRHKRELLYGPTNEEMITEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ ++ +YN+MFV+ Sbjct: 121 YVKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDIDEAAARRAYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLA+TGE+ V+C + ++ P+P E+ D+D Sbjct: 181 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESAVYCDSEVLNLPVPGEDVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L I++QWT+ YAAT DVH + FD +P +++ RGIEVG IFYFGTKYS M Sbjct: 241 --GDLTPIIKQWTSVYAATEDVHEAERFDREVPAERKLHTRGIEVGQIFYFGTKYSEAMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG + + GSYG+G R++ A+IE+ HD GI WP++VAPF+ +++N+K Sbjct: 299 ALVAGPDGVEVPIHGGSYGVGVSRLLGAIIEACHDENGIKWPEAVAPFRAAILNLKQGAA 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACE++Y L G DV +DD ++ G++FA ADL+G P Q++VG K ++D VE+K Sbjct: 359 ETDAACEQLYRELIAKGVDVLYDDTDQRAGAKFATADLIGIPWQILVGPKGLADGTVELK 418 Query: 420 HRLTGIREDMSLEEVINYASH 440 R G RE+++L E + + Sbjct: 419 RRADGSRENVALAEAVARLTQ 439 >gi|23501709|ref|NP_697836.1| prolyl-tRNA synthetase [Brucella suis 1330] gi|81847158|sp|Q8G197|SYP_BRUSU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|23347633|gb|AAN29751.1| prolyl-tRNA synthetase [Brucella suis 1330] Length = 442 Score = 411 bits (1055), Expect = e-112, Method: Composition-based stats. Identities = 259/441 (58%), Positives = 336/441 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRY +YGKEMLR+ DR ++ M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYGAYGKEMLRIQDRQEREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFR 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A Sbjct: 241 NDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ Sbjct: 301 KVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKPGDEG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C EK+Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K Sbjct: 361 CDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKD 420 Query: 421 RLTGIREDMSLEEVINYASHR 441 R G R+ + +E IN + + Sbjct: 421 RKMGERQSLGIEAAINMLTAQ 441 >gi|296536135|ref|ZP_06898264.1| proline--tRNA ligase [Roseomonas cervicalis ATCC 49957] gi|296263547|gb|EFH10043.1| proline--tRNA ligase [Roseomonas cervicalis ATCC 49957] Length = 436 Score = 411 bits (1055), Expect = e-112, Method: Composition-based stats. Identities = 239/438 (54%), Positives = 322/438 (73%), Gaps = 5/438 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ FLP L+E P +A IASHKLMLR GMI Q S GIY+WLPLG + L V+ I+REE Sbjct: 1 MRLSRAFLPTLKEVPAEAAIASHKLMLRAGMIRQTSAGIYAWLPLGLRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+ GA E+ +PT+QSA+LW +SGRYD YGKEMLR+ DR+++ M++GPT+EE++TD+F+S Sbjct: 61 QDAAGAQEILMPTIQSAELWKQSGRYDDYGKEMLRITDRHEREMLFGPTNEEMVTDLFKS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + KSYR+LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ E ++ SY KMFV+ Sbjct: 121 YAKSYRDLPRNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDIDAEAARLSYKKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRA++GPIGGDLSHEFI+LA+TGE+QV+ KD ++F + ++ D++ Sbjct: 181 YLRTFARMGLKAIPMRADTGPIGGDLSHEFIILAETGESQVYLHKDLLEFDVLAQKPDYE 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L+ V+ WT+ YAAT ++H+E +++L +VSARGIEVGHIFYFG KYS M Sbjct: 241 --GDLDPTVDFWTSRYAATDEMHDEAAWNALGAENQVSARGIEVGHIFYFGEKYSKAMGL 298 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G DG QMGSYGIG R++ A+IE++HD GI WPD+VAPF+ +++N+K D Sbjct: 299 TVAGPDGNPVIPQMGSYGIGVSRLLGALIEANHDDAGIKWPDAVAPFRCAILNLKPGDLA 358 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 EK+YA L G D +DD GE+ G +F ADL G+P Q I+G + ++ +E+K Sbjct: 359 TDALSEKLYAAL---GGDAVYDDRGERAGVKFNDADLAGYPWQAIIGPRGAANGIIELKR 415 Query: 421 RLTGIREDMSLEEVINYA 438 R TG R+++S+E + Sbjct: 416 RATGERQEVSIEAALAQI 433 >gi|110633394|ref|YP_673602.1| prolyl-tRNA synthetase [Mesorhizobium sp. BNC1] gi|123162548|sp|Q11JI8|SYP_MESSB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|110284378|gb|ABG62437.1| prolyl-tRNA synthetase [Chelativorans sp. BNC1] Length = 442 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 261/434 (60%), Positives = 347/434 (79%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E PR+AEI SH+LMLR+GMI Q G +SWLPLG++ LD V I+REE Sbjct: 1 MRVSRYFLPILKETPREAEIVSHRLMLRSGMIRQQGAGSFSWLPLGKRVLDKVCQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GA E+ +PT+QSADLW+ESGRY+ YGKEMLR+ DR D+AM+YGPT+EE++TDIFR+ Sbjct: 61 QDRAGAQEILMPTIQSADLWIESGRYNDYGKEMLRIRDRQDRAMLYGPTNEEMVTDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +YN+MFV+ Sbjct: 121 YVKSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKAAYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRA++GPIGGDLSHEFI+LA TGE++VFC+KDF+D P+P + DF Sbjct: 181 YLRTFARMGLKAIPMRADTGPIGGDLSHEFIILASTGESEVFCNKDFLDLPVPPADVDFT 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + +V +WT PYAAT ++H+E + +P K+++ARGIEVGHIF+FGTKYS PM+A Sbjct: 241 NDAEIGGVVSEWTTPYAATDEMHDEAAWAEVPAEKQLAARGIEVGHIFHFGTKYSKPMNA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG++H+V MGSYGIG R+ AA+IE+SHD GIIWP+SVAPF ++LIN+K D Sbjct: 301 KVTGPDGQEHFVSMGSYGIGPTRLTAAIIEASHDDGGIIWPESVAPFDVALINMKVGDAE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C CE++YA ++ G +V +DD ++ G++FA ADL+G P QVIVG + ++ +VE+K+ Sbjct: 361 CDRVCEELYAGMTAAGREVLYDDTDQRAGAKFATADLIGLPWQVIVGPRGIAAGEVEVKN 420 Query: 421 RLTGIREDMSLEEV 434 R TG RE++ + V Sbjct: 421 RATGERENLPISAV 434 >gi|13471387|ref|NP_102953.1| prolyl-tRNA synthetase [Mesorhizobium loti MAFF303099] gi|81855688|sp|Q98KS5|SYP_RHILO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|14022129|dbj|BAB48739.1| proline-tRNA ligase [Mesorhizobium loti MAFF303099] Length = 442 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 265/438 (60%), Positives = 339/438 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENPR+AEI SH+LMLR GMI Q +G +SWLPLG++ LD V IIREE Sbjct: 1 MRLSRYFLPILKENPREAEIVSHRLMLRAGMIRQQGQGSFSWLPLGKRVLDKVCQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA+E+ +PT+QSADLW ESGRY+ YGKEMLR+ DR D+ M+YGPT+EE++T+IFR+ Sbjct: 61 QNRAGALEILMPTIQSADLWRESGRYNDYGKEMLRIKDRQDRDMLYGPTNEEMVTEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG++ +YN+MFVS Sbjct: 121 YVKSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDFEGARSAYNRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LADTGE+QVFC +D++ +P NTDF Sbjct: 181 YLRTFTRMGLQAIPMRADTGPIGGDLSHEFIILADTGESQVFCHRDYLSLAVPGANTDFA 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + IV+ WT PYAAT ++H+E ++ +PE+ +VSARGIEVGHIF+FG KYS PM A Sbjct: 241 NDGEIADIVKTWTTPYAATDEMHDEAAWEKVPESDKVSARGIEVGHIFHFGEKYSKPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGKDH+ GSYGIG R+VAA+IE+SHD GIIWPD+VAPF I LIN+K D Sbjct: 301 KVTGPDGKDHFASGGSYGIGPSRLVAAIIEASHDENGIIWPDAVAPFDIGLINMKVGDAD 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C E++ A + G DV +DD ++ G +FA ADL+G P QVIVG + V+ +VEIK+ Sbjct: 361 CDRVSEELNAAFTAAGKDVLYDDTDQRPGGKFATADLIGLPWQVIVGPRGVAAGEVEIKN 420 Query: 421 RLTGIREDMSLEEVINYA 438 R TG RE + + + Sbjct: 421 RRTGERETLPIADAKKRF 438 >gi|319783000|ref|YP_004142476.1| prolyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168888|gb|ADV12426.1| prolyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 442 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 263/438 (60%), Positives = 340/438 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENPR+AEI SH+LMLR GMI Q +G +SWLPLG++ LD V IIREE Sbjct: 1 MRLSRYFLPILKENPREAEIVSHRLMLRAGMIRQQGQGSFSWLPLGKRVLDKVCRIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GA+E+ +PT+QSADLW ESGRYD YGKEMLR+ DR D+ M+YGPT+EEV+T+I R+ Sbjct: 61 QDRAGALEILMPTIQSADLWRESGRYDDYGKEMLRIKDRQDRDMLYGPTNEEVVTEIVRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG++ +YN+MFVS Sbjct: 121 YVKSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDFEGARAAYNRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL++IPMRA++GPIGGDLSHEFI+LADTGE+QV+C +D++ +P NTDF Sbjct: 181 YLRTFTRMGLQAIPMRADTGPIGGDLSHEFIILADTGESQVYCHRDYLALDVPGANTDFA 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + IV+ WT PYAAT ++H+E ++ + E+ +VSARGIEVGHIF+FG KYS PM A Sbjct: 241 NDAEIADIVKTWTTPYAATDEMHDEAAWEKIGESDKVSARGIEVGHIFHFGDKYSKPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGKDH+V GSYGIG R+VAA+IE+SHD GIIWP++VAPF I LIN+KA D Sbjct: 301 KVTGPDGKDHFVSGGSYGIGPSRLVAAIIEASHDDNGIIWPEAVAPFDIGLINMKAGDAE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C C++++A G DV +DD ++ G +FA ADL+G P QVIVG + V+ ++EIK+ Sbjct: 361 CDGVCDELHAAFVAAGKDVLYDDTDQRPGGKFATADLIGLPWQVIVGPRGVAAGEIEIKN 420 Query: 421 RLTGIREDMSLEEVINYA 438 R TG RE + + + Sbjct: 421 RKTGERETLPIADAKKRF 438 >gi|260430967|ref|ZP_05784938.1| prolyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157] gi|260414795|gb|EEX08054.1| prolyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157] Length = 446 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 239/440 (54%), Positives = 314/440 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+LMLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPSEAQIVSHRLMLRAGMIKQAAAGIYSWLPLGFKVLRKLENIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +P LQSADLW ESGRYD YG+EMLR+ DR+ + M+Y PT EE++TDIFR Sbjct: 61 QIRAGHIPIQMPILQSADLWRESGRYDDYGQEMLRMKDRHGRDMLYTPTAEELVTDIFRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T YQIQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVSSYKDLPLTLYQIQWKFRDEIRPRFGVMRGREFYMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLADTGE++VF D + + D+D Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLADTGESEVFYDSAVTDIRLGQRDIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D +I+E++T+ YA T + H+E LF +PE +R SARGIEVG IFYFGTKYS PM A Sbjct: 241 DKAQCQAIMEEFTSLYARTDETHDEALFQQVPEERRRSARGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 TVQGPDGKQVPVHMGSHGIGVSRLIGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDDE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+KIY L+ +G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACDKIYKALTALGLEPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASH 440 R TG E++S E + + Sbjct: 421 RRTGESEELSPEAAVTRIAE 440 >gi|90417824|ref|ZP_01225736.1| prolyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1] gi|90337496|gb|EAS51147.1| prolyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1] Length = 440 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 260/439 (59%), Positives = 335/439 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GMI Q + G+YS+LPLG++ LD V AIIREE Sbjct: 1 MRLSRYFLPILKETPKEAEIVSHRLMLRAGMIRQQAAGLYSFLPLGKRVLDKVCAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR+GAIE+ +PT+QSADLW ESGRY+ YGKEMLR+ DR+ + ++YGPT+EE++TDIFRS Sbjct: 61 QNRSGAIELLMPTIQSADLWRESGRYEDYGKEMLRIEDRHGRDLLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++++Y++LP Y +Q KFRDE+RPRFGVMRSREFLMKDAYSFDL + SK +Y++MFV+ Sbjct: 121 YVRTYKDLPLNLYHLQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYDNSKIAYDRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R GLK+IPMRA++GPIGG+LSHEFIVLA TGE++VFC +D++D +P E DFD Sbjct: 181 YLRTFERCGLKAIPMRADTGPIGGELSHEFIVLASTGESEVFCHRDYLDLAVPCEGVDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L IV+ WT PYAAT ++H +D L E+ +++ARGIEVGHIF+FGTKYS PM A Sbjct: 241 DAAGLAEIVKAWTTPYAATDEMHETATWDQLAEDDKLAARGIEVGHIFHFGTKYSEPMKA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGKD V MGSYGIG R++AA+IE+SHD GIIWP SVAPF + LIN+K D Sbjct: 301 VVTGPDGKDVPVHMGSYGIGPSRLLAAIIEASHDENGIIWPKSVAPFDVGLINMKPGDAD 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACE +Y ++ G DV +DD + G++FA DL+G P+QVIVG + + EIK Sbjct: 361 CDAACEDLYRQMQAAGIDVLYDDQDTRAGAKFASMDLIGLPMQVIVGPRGAKAGEAEIKL 420 Query: 421 RLTGIREDMSLEEVINYAS 439 R TG R+ + L V+ Sbjct: 421 RATGERQSLPLSSVLARVQ 439 >gi|307942137|ref|ZP_07657488.1| prolyl-tRNA synthetase [Roseibium sp. TrichSKD4] gi|307774423|gb|EFO33633.1| prolyl-tRNA synthetase [Roseibium sp. TrichSKD4] Length = 443 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 247/445 (55%), Positives = 331/445 (74%), Gaps = 3/445 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKYFLPIL+E P++AEI SH+LMLR GMI Q S GIYSWLP+G + L + I+ EE Sbjct: 1 MRLSKYFLPILKETPKEAEIVSHRLMLRAGMIRQQSAGIYSWLPMGHRVLRKIERIVEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA+++ +PT+QSA+LW ESGRYD+YGKEMLR+ DR+++ +++GPT+EE++TDIFR Sbjct: 61 QNRAGAVQLLMPTIQSAELWRESGRYDAYGKEMLRITDRHERDILFGPTNEEMITDIFRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFDL E + SYN+MFV+ Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDLDKESAVESYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL +IPM+AE+GPIGGDLSHEFIVLADTGE++V+C D++ P E+ +FD Sbjct: 181 YLRTYKRMGLTAIPMKAETGPIGGDLSHEFIVLADTGESEVYCHADYLTKQTPGEDVNFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 LN IV WT+ YAAT DV ++ F++ +PE+KR+ ARGIEVG FYFGTKYS PM Sbjct: 241 --GDLNPIVNDWTSHYAATEDVVDKAAFEAKVPEDKRIVARGIEVGQTFYFGTKYSEPMG 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G+DGK+ V MGSYG+G R++ A+IE+SHD GIIW SVAPF + LIN+K D+ Sbjct: 299 AKVAGSDGKEVPVHMGSYGVGVSRLLGALIEASHDDAGIIWHKSVAPFHVGLINLKPGDE 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACE +YA+ G +V +DD + G++FA DL+G P QV+ G + + D +E+K Sbjct: 359 TTDAACEDLYAKFEAAGVEVLYDDTDNRAGAKFASMDLIGLPYQVVAGPRGLKDGVLEVK 418 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 +R TG +E ++ E +N ++ Sbjct: 419 NRATGEKEMLTPEATLNKLVAALTS 443 >gi|126725673|ref|ZP_01741515.1| prolyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150] gi|126704877|gb|EBA03968.1| prolyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150] Length = 470 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 230/445 (51%), Positives = 314/445 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP DA+I SH+LMLR GMI Q S GIYSWLPLG K L N+ I+ EE Sbjct: 26 MRLSRYFLPVLKENPADAQIVSHRLMLRAGMIKQASAGIYSWLPLGLKVLRNIERIVHEE 85 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q + G I + +PT+QSADLW ESGRYD YG+EMLR++DR+ M+YGPT+EE +TDIFR+ Sbjct: 86 QAKAGHIPVLMPTVQSADLWRESGRYDDYGEEMLRISDRHGHDMLYGPTNEEQITDIFRA 145 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T YQIQ KFRDE RPRFGVMR REFLMKD Y+FD+ + + H+YN+ V+ Sbjct: 146 HVHSYKDLPLTLYQIQWKFRDERRPRFGVMRGREFLMKDGYNFDIDYDSAMHAYNRHMVA 205 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GLK+IPMRA+SGPIGG+ +HEF+VLADTGE++VF D +D DFD Sbjct: 206 YLRTYERMGLKAIPMRADSGPIGGEDTHEFLVLADTGESEVFYDSDILDLNFGDRVVDFD 265 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ + +V +WT PYA T + H+E L++ +PE +R S+RGIEVG IFYFGTKYS M A Sbjct: 266 DVSACAEVVTEWTTPYARTDETHDEALYNDIPEARRKSSRGIEVGQIFYFGTKYSDSMGA 325 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + + V MGS+GIG R++ A+IE+SHD GIIWP+ V PF ++N++ D+ Sbjct: 326 SVVDGEQNKVPVHMGSHGIGVSRLLGAIIEASHDDNGIIWPEGVTPFHCGIVNLRQGDEA 385 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC +Y L+ G + +DD E+ G++FA DL+G P ++ VG + + + VE+ Sbjct: 386 TDGACGALYEALTAAGLEPLYDDRNERAGAKFATMDLIGLPWRITVGPRGLKNGVVELTS 445 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R TG +++S+E + + N+ Sbjct: 446 RRTGESQELSIEAAVEAVVKVYENH 470 >gi|315499825|ref|YP_004088628.1| prolyl-tRNA synthetase [Asticcacaulis excentricus CB 48] gi|315417837|gb|ADU14477.1| prolyl-tRNA synthetase [Asticcacaulis excentricus CB 48] Length = 439 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 243/440 (55%), Positives = 327/440 (74%), Gaps = 3/440 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y LP+L+ENP +A+I SH+LMLRTGMI Q + GIY+WLPLG + L + I+ EE Sbjct: 1 MRLSRYLLPLLKENPSEAQIVSHRLMLRTGMIRQEAAGIYAWLPLGLRVLRKIEKIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +PTLQ ADLW ESGRYD YG+EMLR+ DR+++ M+YGPT+EE++T+IFR Sbjct: 61 MQRAGAVELLMPTLQLADLWRESGRYDDYGQEMLRIKDRHEREMLYGPTNEEMITEIFRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ ++ +YN+MF++ Sbjct: 121 TVKSYKDLPMNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDIDEASARKAYNRMFIA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL F RLGLK++PMRA++GPIGGDLSHEFI+LA+TGE+ VFC KD +D P P + D+D Sbjct: 181 YLNTFSRLGLKAVPMRADTGPIGGDLSHEFIILAETGESAVFCHKDLVDMPAPGADVDWD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ L V+Q T+ YAAT ++H+E F+++P +K++SARGIEVGHIFYFG KYS PM A Sbjct: 241 DLQGL---VDQRTSLYAATEEMHDEAAFNAVPADKQLSARGIEVGHIFYFGEKYSAPMGA 297 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 GADG V MGSYG+G R++ +IE+SHD GIIWP+SV PF ++L+N++ D+ Sbjct: 298 KVSGADGSQVNVHMGSYGVGVSRLIGGIIEASHDEAGIIWPESVTPFDVALVNLRVGDEA 357 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACEK Y L G DV + D ++ G++FA DL+G P Q+I+G K +++ +VEIKH Sbjct: 358 CDAACEKAYKALKAAGRDVLYHDTDDRPGAKFASMDLIGIPWQLIIGPKGIAEGQVEIKH 417 Query: 421 RLTGIREDMSLEEVINYASH 440 R TG R + + V+ + Sbjct: 418 RATGERHTAAFDAVLEQLTK 437 >gi|329889349|ref|ZP_08267692.1| prolyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568] gi|328844650|gb|EGF94214.1| prolyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568] Length = 438 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 237/441 (53%), Positives = 321/441 (72%), Gaps = 4/441 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P DA+I SH+LMLR GMI Q + GIY+WLPLG + L + I+R+E Sbjct: 1 MRLSRYFLPILKEAPSDAQIVSHQLMLRAGMIKQEAAGIYAWLPLGLRVLRKIEGIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q + GA+E+ +PTLQ ADLW ESGRYD+YG EMLR+ DR+++ ++YGPT+EE++TDIFR+ Sbjct: 61 QVKAGAVELLMPTLQLADLWRESGRYDAYGPEMLRITDRHERELLYGPTNEEMVTDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ LP + IQ KFRDE RPRFGVMR REFLMKDAYSFDL ++ +Y +MF + Sbjct: 121 YVKSYKALPLNLFHIQWKFRDERRPRFGVMRGREFLMKDAYSFDLDEASARIAYKRMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL F RLGLK++PMRA++GPIGGDLSHEFIVLA+TGE++VFC + ++ P N + Sbjct: 181 YLNTFARLGLKAVPMRADTGPIGGDLSHEFIVLAETGESEVFCDRKLVEMAAPGHNLSVE 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLP-ENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + + + TA YAAT ++H+ F++ E R+SARGIEVGHIFYFGTKYS M Sbjct: 241 QLEGVFN---ERTALYAATEEMHDAAQFETQTAEGDRLSARGIEVGHIFYFGTKYSAAMK 297 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G +G+D V MGSYG+G R++ A+IE+SHD GIIWPDSVAPF + +IN++A D+ Sbjct: 298 AKVAGPNGQDTEVHMGSYGVGVSRLLGAIIEASHDEGGIIWPDSVAPFDVVVINLRASDE 357 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACE A+L +G DV +DD E+ G +FA ADL+G P Q+ +G K ++D VE+K Sbjct: 358 AVSAACEDAVAKLEALGKDVLYDDTDERPGGKFATADLIGVPWQLTIGPKGLADGVVELK 417 Query: 420 HRLTGIREDMSLEEVINYASH 440 R TG ++ +SL+ + + Sbjct: 418 RRATGEKQSLSLDAALELLTK 438 >gi|254488857|ref|ZP_05102062.1| prolyl-tRNA synthetase [Roseobacter sp. GAI101] gi|214045726|gb|EEB86364.1| prolyl-tRNA synthetase [Roseobacter sp. GAI101] Length = 446 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 234/446 (52%), Positives = 322/446 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+LMLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPSEAQIVSHRLMLRAGMIKQSAAGIYSWLPLGFKVLRKIENIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PTLQSADLW ESGRYD+YG EMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 61 QQRAGHIPMLMPTLQSADLWKESGRYDAYGPEMLRIKDRQDRDMLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVGSYKDLPLTLYHIQWKFRDEIRPRFGVMRGREFLMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLA+TGE++VF + D+D Sbjct: 181 YLRSYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSQITELKFGDREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +++E++T+ YA T + H+ LF +P++++ +ARGIEVG IFYFGTKYS PM A Sbjct: 241 SVDQCQAVLEEFTSRYARTDETHDAALFSEVPQDRQRTARGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF + ++N+K D+ Sbjct: 301 TVQGPDGKPTPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHVGIVNLKQGDEE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+ +Y ++ +G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADSACQALYDSITALGLEPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R TG E+M+ E+ + + ++ +R Sbjct: 421 RRTGESEEMAPEDAVQKIAEIYAKHR 446 >gi|92117720|ref|YP_577449.1| prolyl-tRNA synthetase [Nitrobacter hamburgensis X14] gi|123083656|sp|Q1QLA8|SYP_NITHX RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|91800614|gb|ABE62989.1| prolyl-tRNA synthetase [Nitrobacter hamburgensis X14] Length = 439 Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 249/439 (56%), Positives = 329/439 (74%), Gaps = 3/439 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+E P++AEI SH+LMLR GM+ Q + GIY+WLPLG + L + AI+REE Sbjct: 1 MRLSRFFLPILKETPKEAEIVSHRLMLRAGMMRQEAAGIYAWLPLGLRVLKKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PTLQ ADLW ESGRYD+YG EMLR+ DR+ + ++YGPT+EE++T+IFRS Sbjct: 61 QNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIQDRHKRELLYGPTNEEMITEIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ G++ SYN+MFV+ Sbjct: 121 YVRSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDIDEVGARLSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLA+TGE+ V+ KD +D P+P + D+D Sbjct: 181 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYIDKDVLDLPVPGTDVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L IV+QWT YAAT DVH+ ++ +PE +RV RGIEVG IFYFGTKYS M Sbjct: 241 --GDLTPIVKQWTTAYAATEDVHDGARYEREVPEERRVHTRGIEVGQIFYFGTKYSESMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG + + GSYG+G R+V A+IE+ HD GI WP++VAPF ++++N+K Sbjct: 299 ALVAGPDGVEQPIHGGSYGVGVSRLVGAIIEACHDDAGIKWPEAVAPFTVAILNLKQGAG 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACE++Y LS G DV +DD ++ G++FA ADL+G P QV+VG K +++ KVEIK Sbjct: 359 DTDAACERLYRELSAKGVDVLYDDTDQRAGAKFATADLIGIPWQVMVGPKGLAEGKVEIK 418 Query: 420 HRLTGIREDMSLEEVINYA 438 R G RE+++LE+ + Sbjct: 419 RRGDGTRENVALEDAVERL 437 >gi|86749715|ref|YP_486211.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris HaA2] gi|114152241|sp|Q2IWW0|SYP_RHOP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|86572743|gb|ABD07300.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris HaA2] Length = 439 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 248/440 (56%), Positives = 332/440 (75%), Gaps = 3/440 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+ENP++AEI SH+LMLR GM+ Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLSRFFLPILKENPKEAEIVSHRLMLRAGMLRQEAAGIYAWLPLGHRVLKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PTLQ ADLW ESGRYD+YG EMLR++DR+ + ++YGPT+EE++T+IFR+ Sbjct: 61 QNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRISDRHKRELLYGPTNEEMITEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ ++ SYN+MFV+ Sbjct: 121 YVKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAAARKSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLA+TGE+ V+C +D + P+P E D+D Sbjct: 181 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYCDRDVLSLPVPDETVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L I++QWT+ YAAT DVH+ ++S +PE R+ RGIEVG IFYFGTKYS M Sbjct: 241 --GDLTPIIKQWTSVYAATEDVHDAVRYESEVPEANRLHTRGIEVGQIFYFGTKYSDSMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG D + GSYG+G R+V A+IE+ HD GIIWP+ VAPF+++++N+K D Sbjct: 299 ANVAGPDGTDAPIHGGSYGVGVSRLVGAIIEACHDDNGIIWPEEVAPFRVAILNLKQGDA 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACE++Y L+ G DV +DD ++ G++FA ADL+G P QV+VG K ++D K+E+K Sbjct: 359 ATDAACEQLYKELAAKGVDVLYDDTDQRAGAKFATADLIGIPWQVLVGPKGLADGKIELK 418 Query: 420 HRLTGIREDMSLEEVINYAS 439 R G RE+++L E + + Sbjct: 419 RRSDGSRENIALAETVARLA 438 >gi|118138193|pdb|2I4L|A Chain A, Rhodopseudomonas Palustris Prolyl-Trna Synthetase gi|118138194|pdb|2I4L|B Chain B, Rhodopseudomonas Palustris Prolyl-Trna Synthetase gi|118138195|pdb|2I4L|C Chain C, Rhodopseudomonas Palustris Prolyl-Trna Synthetase gi|118138196|pdb|2I4M|A Chain A, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In Complex With Proams gi|118138197|pdb|2I4M|B Chain B, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In Complex With Proams gi|118138198|pdb|2I4M|C Chain C, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In Complex With Proams gi|118138199|pdb|2I4N|A Chain A, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In Complex With Cysams gi|118138200|pdb|2I4N|B Chain B, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In Complex With Cysams gi|118138201|pdb|2I4N|C Chain C, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In Complex With Cysams gi|118138202|pdb|2I4O|A Chain A, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In Complex With Atp gi|118138203|pdb|2I4O|B Chain B, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In Complex With Atp gi|118138204|pdb|2I4O|C Chain C, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In Complex With Atp Length = 458 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 249/440 (56%), Positives = 335/440 (76%), Gaps = 3/440 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+ENP++AEI SH+LMLR GM+ Q + GIY+WLPLG + L + I+REE Sbjct: 21 MRLSRFFLPILKENPKEAEIVSHRLMLRAGMLRQEAAGIYAWLPLGHRVLKKIEQIVREE 80 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PTLQ ADLW ESGRYD+YG EMLR+ADR+ + ++YGPT+EE++T+IFR+ Sbjct: 81 QNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIADRHKRELLYGPTNEEMITEIFRA 140 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ G++ SYNKMFV+ Sbjct: 141 YIKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAGARKSYNKMFVA 200 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLA+TGE+ V+ +D ++ P+P EN D+D Sbjct: 201 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYIDRDVLNLPVPDENVDYD 260 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L I++QWT+ YAAT DVH ++S +PE R++ RGIEVG IFYFGTKYS M Sbjct: 261 --GDLTPIIKQWTSVYAATEDVHEPARYESEVPEANRLNTRGIEVGQIFYFGTKYSDSMK 318 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG D + GSYG+G R++ A+IE+ HD GIIWP++VAPF+++++N+K D Sbjct: 319 ANVTGPDGTDAPIHGGSYGVGVSRLLGAIIEACHDDNGIIWPEAVAPFRVTILNLKQGDA 378 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 AC+++Y LS G DV +DD ++ G++FA ADL+G P Q+ VG + +++ KVE+K Sbjct: 379 ATDAACDQLYRELSAKGVDVLYDDTDQRAGAKFATADLIGIPWQIHVGPRGLAEGKVELK 438 Query: 420 HRLTGIREDMSLEEVINYAS 439 R G RE+++L +V+ + Sbjct: 439 RRSDGARENLALADVVARLT 458 >gi|316933915|ref|YP_004108897.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris DX-1] gi|315601629|gb|ADU44164.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris DX-1] Length = 439 Score = 408 bits (1048), Expect = e-111, Method: Composition-based stats. Identities = 252/441 (57%), Positives = 335/441 (75%), Gaps = 3/441 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+ENP++AEI SH+LMLR GM+ Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLSRFFLPILKENPKEAEIVSHRLMLRAGMLRQEAAGIYAWLPLGHRVLKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PTLQ ADLW ESGRYD+YG EMLR+ADR+ + ++YGPT+EE++T+IFR+ Sbjct: 61 QNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIADRHKRELLYGPTNEEMITEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ G++ SYNKMFV+ Sbjct: 121 YIKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAGARKSYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLADTGE+ VF +D ++ P+P EN D+D Sbjct: 181 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLADTGESGVFIDRDVLNLPVPDENVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L I++QWT+ YAAT DVH ++S +PE R++ RGIEVG IFYFGTKYS M Sbjct: 241 --ADLTPIIKQWTSVYAATEDVHEPARYESEVPEANRLNTRGIEVGQIFYFGTKYSDSMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG D + GSYG+G R+V A+IE+ HD GIIWP++VAPF+++++N+K D Sbjct: 299 ANVAGPDGTDAPIHGGSYGVGVSRLVGAIIEACHDDNGIIWPEAVAPFRVTILNLKQGDA 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 AC+++Y LS G DV +DD ++ G++FA ADL+G P QV VG + +++ KVE+K Sbjct: 359 ATDAACDQLYRELSAKGVDVLYDDTDQRAGAKFATADLIGIPWQVHVGPRGLAEGKVELK 418 Query: 420 HRLTGIREDMSLEEVINYASH 440 R G RE+++L +++ + Sbjct: 419 RRSDGSRENLALADLVARLTQ 439 >gi|85717006|ref|ZP_01047968.1| prolyl-tRNA synthetase [Nitrobacter sp. Nb-311A] gi|85696130|gb|EAQ34026.1| prolyl-tRNA synthetase [Nitrobacter sp. Nb-311A] Length = 439 Score = 408 bits (1048), Expect = e-111, Method: Composition-based stats. Identities = 253/440 (57%), Positives = 329/440 (74%), Gaps = 3/440 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+E P++AEI SH+LMLR GMI Q + GIY+WLPLG + L + AI+REE Sbjct: 1 MRLSRFFLPILKETPKEAEIVSHRLMLRAGMIRQEAAGIYAWLPLGLRVLKKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PTLQ ADLW ESGRYD+YG EMLR+ DR+ + ++YGPT+EE++T+IFR Sbjct: 61 QNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIQDRHKRELLYGPTNEEMITEIFRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I+SY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ G++ SYNKMFV+ Sbjct: 121 YIRSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDIDEAGARRSYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLA+TGE+ V+ KD +D P+P + D+D Sbjct: 181 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYIDKDVLDLPVPGTDVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHN-EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L IV+QWT YAAT DVH+ + +PE +RV RGIEVG IFYFGTKYS M Sbjct: 241 --GDLTPIVKQWTVAYAATEDVHDGPRYEREVPEERRVHTRGIEVGQIFYFGTKYSDSMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 G DG + + GSYG+G R+V A+IE+ HD GI WPD+VAPF+++++N+K Sbjct: 299 TLVTGPDGVEQPIHGGSYGVGVSRLVGAIIEACHDEGGIKWPDAVAPFRVAILNLKQGAG 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACE+IY LS G DV +DD ++ G++FA ADL+G P QV+VG K +++ KVEIK Sbjct: 359 DTDAACERIYRELSAKGIDVLYDDTDQRAGAKFATADLIGIPWQVMVGPKGLAEGKVEIK 418 Query: 420 HRLTGIREDMSLEEVINYAS 439 R G RE+++LE+V+ + Sbjct: 419 RREDGSRENVALEDVVARLT 438 >gi|240850599|ref|YP_002971999.1| prolyl-tRNA synthetase [Bartonella grahamii as4aup] gi|240267722|gb|ACS51310.1| prolyl-tRNA synthetase [Bartonella grahamii as4aup] Length = 441 Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats. Identities = 265/439 (60%), Positives = 343/439 (78%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP++AEI SH+LMLR GMI Q + GIYSWLPLG+K LD V IIREE Sbjct: 1 MRLSQYFLPLLKENPKEAEIVSHRLMLRAGMIRQQTSGIYSWLPLGKKVLDKVCRIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GAIE+ +PT+QSADLW ESGRYD YG EMLR+ DR + ++YGPT+EE++TDIFRS Sbjct: 61 QERAGAIEILMPTIQSADLWRESGRYDDYGLEMLRIKDRQKRDLLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMR+REFLMKDAYSFDL EGSK SYN+MFV+ Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEIRPRFGVMRAREFLMKDAYSFDLDYEGSKTSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGLK+IPMRA++GPIGG+LSHEFI+LA+TGE+ +FC+K F++ +P + DF Sbjct: 181 YLRTFSRLGLKAIPMRADTGPIGGELSHEFIILAETGESAIFCNKQFLELTVPDSSIDFS 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L+ IV+QWT+ YAAT ++HNE+ + + ++ R+SARGIEVGHIF+FGTKYS PM A Sbjct: 241 DKAVLDDIVKQWTSFYAATEEMHNEEEWAKVSDHNRLSARGIEVGHIFHFGTKYSAPMEA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP S+APF +IN+K+ D+ Sbjct: 301 KVMGQDGKEHVVSMGSYGIGPSRLVAAAIEASHDENGIIWPKSMAPFDFGIINMKSDDEK 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACE +Y L + G D DD E+ GS+FA DL+G P Q+IVG ++ ++VEIK Sbjct: 361 CTKACEFLYQGLKEAGFDPLLDDRNERPGSKFATMDLIGLPTQIIVGPNSIAQNEVEIKD 420 Query: 421 RLTGIREDMSLEEVINYAS 439 R TG+++ + +E+V++ S Sbjct: 421 RKTGVKKSLKVEDVLSQLS 439 >gi|192291648|ref|YP_001992253.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1] gi|226701325|sp|B3Q7L2|SYP_RHOPT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|192285397|gb|ACF01778.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1] Length = 438 Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats. Identities = 249/440 (56%), Positives = 335/440 (76%), Gaps = 3/440 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+ENP++AEI SH+LMLR GM+ Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLSRFFLPILKENPKEAEIVSHRLMLRAGMLRQEAAGIYAWLPLGHRVLKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PTLQ ADLW ESGRYD+YG EMLR+ADR+ + ++YGPT+EE++T+IFR+ Sbjct: 61 QNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIADRHKRELLYGPTNEEMITEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ G++ SYNKMFV+ Sbjct: 121 YIKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAGARKSYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLA+TGE+ V+ +D ++ P+P EN D+D Sbjct: 181 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYIDRDVLNLPVPDENVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L I++QWT+ YAAT DVH ++S +PE R++ RGIEVG IFYFGTKYS M Sbjct: 241 --GDLTPIIKQWTSVYAATEDVHEPARYESEVPEANRLNTRGIEVGQIFYFGTKYSDSMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG D + GSYG+G R++ A+IE+ HD GIIWP++VAPF+++++N+K D Sbjct: 299 ANVTGPDGTDAPIHGGSYGVGVSRLLGAIIEACHDDNGIIWPEAVAPFRVTILNLKQGDA 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 AC+++Y LS G DV +DD ++ G++FA ADL+G P Q+ VG + +++ KVE+K Sbjct: 359 ATDAACDQLYRELSAKGVDVLYDDTDQRAGAKFATADLIGIPWQIHVGPRGLAEGKVELK 418 Query: 420 HRLTGIREDMSLEEVINYAS 439 R G RE+++L +V+ + Sbjct: 419 RRSDGSRENLALADVVARLT 438 >gi|188580267|ref|YP_001923712.1| prolyl-tRNA synthetase [Methylobacterium populi BJ001] gi|226701310|sp|B1ZA28|SYP_METPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|179343765|gb|ACB79177.1| prolyl-tRNA synthetase [Methylobacterium populi BJ001] Length = 441 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 254/439 (57%), Positives = 334/439 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E P++AEI SH+LMLR GMI Q + GIY+WLPLG + L+ V +IR E Sbjct: 1 MRLSRYFLPILRETPKEAEIVSHRLMLRAGMIRQEAAGIYAWLPLGLRVLNKVCDVIRAE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GA+E+ +PT+Q+ADLW ESGRY++YGKEMLRL DR+++ ++YGPT EEV+T+IFR+ Sbjct: 61 QDRAGAVEILMPTIQAADLWRESGRYEAYGKEMLRLKDRHERELLYGPTAEEVVTEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SY++LP YQI KFRDE+RPRFG MRSREFLMKD YSFDL ++HSYNK+FVS Sbjct: 121 SARSYKDLPKNLYQISWKFRDEVRPRFGTMRSREFLMKDGYSFDLDQAAARHSYNKVFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F LGL++IPMRA++GPIGGDLSHEFI+LA TGE++VFC + ++D P+P + DFD Sbjct: 181 YLRTFETLGLRAIPMRADTGPIGGDLSHEFIILAKTGESEVFCDRAYLDMPVPPPSVDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ L +V+ WT+ YAAT ++H+E +F +PE R+SARGIEVGHIFYFGTKYS PM A Sbjct: 241 DVAGLQGVVDSWTSHYAATDEMHDEAVFAEVPEASRLSARGIEVGHIFYFGTKYSTPMKA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG++ V MGSYGIG R+VAA IE+SHD GIIWPD++APF ++LIN+K D Sbjct: 301 VVTGPDGQERPVHMGSYGIGPSRLVAATIEASHDEAGIIWPDAIAPFDVALINLKVGDAA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C AC +I + L G V +DD E+ G++FA ADL+G P QVIVG K +++ K+E+K Sbjct: 361 CDAACAEIQSALETAGLSVLYDDRDERPGAKFATADLIGLPWQVIVGPKGLAEGKIELKR 420 Query: 421 RLTGIREDMSLEEVINYAS 439 R +G RE + ++ Sbjct: 421 RASGERETLDPVDLPARIR 439 >gi|39935993|ref|NP_948269.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris CGA009] gi|81829575|sp|Q6N5P6|SYP_RHOPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|39649847|emb|CAE28369.1| proline-tRNA ligase [Rhodopseudomonas palustris CGA009] Length = 438 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 249/440 (56%), Positives = 335/440 (76%), Gaps = 3/440 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+ENP++AEI SH+LMLR GM+ Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLSRFFLPILKENPKEAEIVSHRLMLRAGMLRQEAAGIYAWLPLGHRVLKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PTLQ ADLW ESGRYD+YG EMLR+ADR+ + ++YGPT+EE++T+IFR+ Sbjct: 61 QNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIADRHKRELLYGPTNEEMITEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ G++ SYNKMFV+ Sbjct: 121 YIKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAGARKSYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLA+TGE+ V+ +D ++ P+P EN D+D Sbjct: 181 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYIDRDVLNLPVPDENVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L I++QWT+ YAAT DVH ++S +PE R++ RGIEVG IFYFGTKYS M Sbjct: 241 --GDLTPIIKQWTSVYAATEDVHEPARYESEVPEANRLNTRGIEVGQIFYFGTKYSDSMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG D + GSYG+G R++ A+IE+ HD GIIWP++VAPF+++++N+K D Sbjct: 299 ANVTGPDGTDAPIHGGSYGVGVSRLLGAIIEACHDDNGIIWPEAVAPFRVTILNLKQGDA 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 AC+++Y LS G DV +DD ++ G++FA ADL+G P Q+ VG + +++ KVE+K Sbjct: 359 ATDAACDQLYRELSAKGVDVLYDDTDQRAGAKFATADLIGIPWQIHVGPRGLAEGKVELK 418 Query: 420 HRLTGIREDMSLEEVINYAS 439 R G RE+++L +V+ + Sbjct: 419 RRSDGARENLALADVVARLT 438 >gi|90423927|ref|YP_532297.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisB18] gi|114152242|sp|Q215F8|SYP_RHOPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|90105941|gb|ABD87978.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisB18] Length = 439 Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 244/440 (55%), Positives = 326/440 (74%), Gaps = 3/440 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+E P++AEI SH+LMLR GM+ Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLSRFFLPILKETPKEAEIVSHRLMLRAGMMRQEAAGIYAWLPLGLRVLKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE +PTLQ ADLW ESGRYD+YG EMLR+ DR+ + ++YGPT+EE++T+IFR+ Sbjct: 61 QNRAGAIECLMPTLQLADLWRESGRYDAYGPEMLRITDRHKRELLYGPTNEEMITEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY+NLP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ ++ SYN+MFV+ Sbjct: 121 YVRSYKNLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDIDEAAARKSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLA+TGE+ VFC D ++ P+P ++ D+D Sbjct: 181 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVFCDSDVLNLPVPGDDVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L I++QWT+ YAAT DVH+ + F+ +P +K+++ RGIEVG IFYFGTKYS M Sbjct: 241 --GDLTPIIKQWTSVYAATEDVHDAERFEREVPADKKLNTRGIEVGQIFYFGTKYSDKMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG D V GSYG+G R+V A+IE+ HD GI WP+ VAPF+ +++N+K Sbjct: 299 ALVAGPDGVDVPVHGGSYGVGVSRLVGAIIEACHDENGIKWPEEVAPFRAAILNLKQGSA 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACE +Y LS G DV +DD ++ G +FA ADL+G P Q++VG K +++ KVE+K Sbjct: 359 DTDAACEALYKELSAKGVDVLYDDTDQRAGGKFATADLIGIPWQILVGPKGLAEGKVELK 418 Query: 420 HRLTGIREDMSLEEVINYAS 439 R G RE+++ E + + Sbjct: 419 RRADGSRENVTPAEAVARLT 438 >gi|75676056|ref|YP_318477.1| prolyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255] gi|114152223|sp|Q3SRG6|SYP_NITWN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|74420926|gb|ABA05125.1| Prolyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255] Length = 439 Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 252/439 (57%), Positives = 326/439 (74%), Gaps = 3/439 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+E P++AEI SH+LMLR GMI Q + GIY+WLPLG + L + AI+REE Sbjct: 1 MRLSRFFLPILKETPKEAEIVSHRLMLRAGMIRQEAAGIYAWLPLGLRVLKKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PTLQ ADLW ESGRYD+YG EMLR+ DR+ + ++YGPT+EE++T+IFR Sbjct: 61 QNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIQDRHKRELLYGPTNEEMITEIFRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I+SY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ G++ SYN+MFV+ Sbjct: 121 YIRSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDIDEAGARRSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLA+TGE+ V+ KD +D PIP D+D Sbjct: 181 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYIDKDVLDLPIPGTEVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHN-EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L IV QWT YAAT DVH+ + +PE +RV RGIEVG IFYFGTKYS M Sbjct: 241 --GDLTPIVRQWTTAYAATEDVHDGPRYEREVPEERRVHTRGIEVGQIFYFGTKYSESMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG + + GSYG+G R+V A+IE+ HD GI WP++VAPF ++++N+K Sbjct: 299 ALVTGTDGVEQPIHGGSYGVGVSRLVGAIIEACHDEAGIKWPEAVAPFTVAILNLKQGAS 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +ACE+IY LS G DV +DD ++ G++FA ADL+G P QV+VG K +++ KVEIK Sbjct: 359 DTDEACERIYRELSARGVDVLYDDTDQRAGAKFATADLIGSPWQVMVGPKGLAEGKVEIK 418 Query: 420 HRLTGIREDMSLEEVINYA 438 R G RE+++LE+ + Sbjct: 419 RRGDGSRENVALEDAVARL 437 >gi|56696018|ref|YP_166372.1| prolyl-tRNA synthetase [Ruegeria pomeroyi DSS-3] gi|81820109|sp|Q5LUD3|SYP_SILPO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|56677755|gb|AAV94421.1| prolyl-tRNA synthetase [Ruegeria pomeroyi DSS-3] Length = 464 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 238/449 (53%), Positives = 322/449 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+LMLR GMI Q GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPAEAQIVSHRLMLRAGMIKQAQAGIYSWLPLGFKVLRKLENIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PTLQSADLW ESGRYD YG+EMLR+ DR+ + M++GPT+EE++TDIFR Sbjct: 61 QIRAGHIPMLMPTLQSADLWRESGRYDDYGQEMLRITDRHGRDMLFGPTNEELITDIFRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVSSYKDLPLTLYHIQWKFRDEIRPRFGVMRGREFLMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+R + R+GL++IPMRA+SGPIGGD +HEF+VLA+TGE++VF D + D+D Sbjct: 181 YIRTYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSKVTDIRLGEREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +++E++T+ YA T + H+E +F+ +PE +R SARGIEVG IFYFGTKYS PM A Sbjct: 241 SVDQCRAVMEEFTSLYARTDETHDEAVFNQIPEERRRSARGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 TVQGPDGKPVPVHMGSHGIGVSRLIGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDGE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+++YA LS +G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACDQLYAALSAIGLEPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFSNNRPVL 449 R TG ++S EE + + ++ + P L Sbjct: 421 RKTGESVELSPEEAVKKVADIYAPHHPHL 449 >gi|114764030|ref|ZP_01443271.1| prolyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601] gi|114543622|gb|EAU46636.1| prolyl-tRNA synthetase [Roseovarius sp. HTCC2601] Length = 445 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 231/440 (52%), Positives = 311/440 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A+I SH+ MLR GMI Q S GIYSWLPLG K L + II EE Sbjct: 1 MRLSRYFLPVLKETPAEAQIVSHRYMLRAGMIKQASAGIYSWLPLGYKVLRKIENIIHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PT+QSADLW ESGRYD+YG EMLR+ DR+D+ M+Y PT EE++TDIFR+ Sbjct: 61 QARAGHIPMLMPTIQSADLWRESGRYDAYGAEMLRITDRHDRDMLYTPTAEELITDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++ SYR+LP T YQIQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 NVSSYRDLPLTMYQIQWKFRDEIRPRFGVMRGREFYMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLA+TGE++VF + + D+D Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSEITELKFGDRAIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +++E++T+ YA T + H+E +F+ +PE +R +ARGIEVG IFYFGTKYS M A Sbjct: 241 SVEQCQAVLEEFTSRYARTDETHDEAVFNQVPEARRRTARGIEVGQIFYFGTKYSEAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T DG V MGS+GIG R++ A+IE+SHD +GIIWP+ V PF ++N+K D Sbjct: 301 TVSDKDGNQVPVHMGSHGIGVSRLLGAIIEASHDDRGIIWPEGVTPFHCGIVNLKTGDAE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+KI+A L +G D +DD E+ G++FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACDKIHAALIALGLDPLYDDTNERAGAKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASH 440 R TG E++ E + + Sbjct: 421 RRTGESEELPPEAAVAKIAE 440 >gi|89070126|ref|ZP_01157455.1| prolyl-tRNA synthetase [Oceanicola granulosus HTCC2516] gi|89044243|gb|EAR50389.1| prolyl-tRNA synthetase [Oceanicola granulosus HTCC2516] Length = 466 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 236/443 (53%), Positives = 320/443 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A+IASH+LMLR GMI Q GIYSWLPLG + L + I+ EE Sbjct: 1 MRLSRYFLPVLKETPAEAQIASHRLMLRAGMIKQAGAGIYSWLPLGYRVLKKIERIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G + +PTLQ+A+LW ESGRYD+YG EMLR+ DR+D+ M+YGPT+EE++TDIFRS Sbjct: 61 QQRAGHHPVLMPTLQTAELWRESGRYDAYGPEMLRIRDRHDRDMLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVASYKDLPLTLYHIQWKFRDEVRPRFGVMRGREFLMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLA+TGE++VF + D D+D Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSEITDLRFGEREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D +++ ++T+ YA T + H+E LF +PE +R SARGIEVG IFYFGTKYS PM A Sbjct: 241 DRAQCEAVMAEFTSRYARTDETHDEALFAEVPEARRRSARGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DGK V MGS+GIG R+V A+IE++HD KGI+WP+ V PF + L+N+K D Sbjct: 301 TVQGPDGKPVPVHMGSHGIGVSRLVGALIEANHDDKGIVWPEGVTPFHVGLVNLKTGDGD 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+KIY +L+ G +V +DD E+ G++FA DL+G P +V VG + + + VE+ Sbjct: 361 ADAACQKIYDQLTACGLEVLYDDRDERAGAKFATMDLIGLPWRVTVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R TG E+++ + + + ++ Sbjct: 421 RRTGDSEEIAPDALTDRLCEIYA 443 >gi|254466898|ref|ZP_05080309.1| prolyl-tRNA synthetase [Rhodobacterales bacterium Y4I] gi|206687806|gb|EDZ48288.1| prolyl-tRNA synthetase [Rhodobacterales bacterium Y4I] Length = 451 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 233/446 (52%), Positives = 316/446 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+LMLR GMI Q S GIYSWLPLG K L + +I+ +E Sbjct: 1 MRLSRYFLPVLKENPSEAQIVSHRLMLRAGMIKQSSAGIYSWLPLGFKVLKKIESIVHDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M + T+Q ADLW ESGRYD YG+EMLR+ DR+D+ M++GPT+EE++TDIFR+ Sbjct: 61 QIRAGHIPMLMATMQPADLWRESGRYDDYGQEMLRIKDRHDRDMLFGPTNEEMITDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T YQ+Q KFRDE+RPRFGVMR REF MKD Y+FDL+ E + H+YN+ VS Sbjct: 121 HVSSYKDLPLTMYQVQWKFRDEIRPRFGVMRGREFYMKDGYNFDLSKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+ GPIGGD +HEF+VLA+TGE++VF D + D+D Sbjct: 181 YLRTYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSAVTDLTFGDRDIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +++E++T+ YA T + H+E LF+ +PE +R ARGIEVG IFYFGTKYS M A Sbjct: 241 SVEQCQAVLEEFTSRYARTDETHDEALFNQIPEERRRVARGIEVGQIFYFGTKYSESMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DGK V MGS+GIG R++ A+IE+SHD GIIWP+ V PF ++N+K D Sbjct: 301 TVQGPDGKPVPVHMGSHGIGVSRLLGAIIEASHDDNGIIWPEGVTPFHCGIVNLKQGDDE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC ++YA LS G D +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACNQLYAALSAAGLDPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R TG E++S EE + + +R Sbjct: 421 RRTGESEELSPEEAVKKVVSIYEKHR 446 >gi|260428562|ref|ZP_05782541.1| prolyl-tRNA synthetase [Citreicella sp. SE45] gi|260423054|gb|EEX16305.1| prolyl-tRNA synthetase [Citreicella sp. SE45] Length = 447 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 234/440 (53%), Positives = 311/440 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A+I SH+ MLR GMI Q S GIYSWLP+G K L + II EE Sbjct: 1 MRLSRYFLPVLKETPAEAQIVSHRYMLRAGMIKQASAGIYSWLPMGFKVLRKIENIIHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PT+QSA+LW ESGRYD+YG EMLR+ DR+D+ M++ PT EE++TDIFR+ Sbjct: 61 QQRAGHIPMLMPTIQSAELWRESGRYDAYGAEMLRITDRHDREMLFTPTAEELITDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++ SYR+LP T YQIQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 NVSSYRDLPLTMYQIQWKFRDEIRPRFGVMRGREFLMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLA+TGE++VF D D+D Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSQITDLKFGDREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 +++E++T+ YA T + H+E +F+ +PE +R ARGIEVG IFYFGTKYS P+ A Sbjct: 241 SREQCQAVLEEFTSRYARTDETHDEAVFNQVPEERRRVARGIEVGQIFYFGTKYSEPLGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T ADG V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 TVADADGNQVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKTGDAE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACEKI+A L +G D +DD E+ G++FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACEKIHAALIALGLDPLYDDTTERAGAKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASH 440 R TG E+M E + + Sbjct: 421 RRTGESEEMPPEAAVAKIAE 440 >gi|99081693|ref|YP_613847.1| prolyl-tRNA synthetase [Ruegeria sp. TM1040] gi|122984229|sp|Q1GFI1|SYP_SILST RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|99037973|gb|ABF64585.1| prolyl-tRNA synthetase [Ruegeria sp. TM1040] Length = 451 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 228/445 (51%), Positives = 322/445 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A++ SH+ MLR GMI Q + GIYSWLPLG + L + I+ EE Sbjct: 1 MRLSRYFLPVLKETPSEAQVVSHRYMLRAGMIKQSAAGIYSWLPLGYRVLKKIEGIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PT+QSADLW ESGRYD+YG+EMLR+ DR+D+ M++ PT EE++TDIFR+ Sbjct: 61 QMRAGHIPMLMPTIQSADLWRESGRYDAYGEEMLRIRDRHDRDMLFTPTAEELITDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++ SY++LP T YQIQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ V+ Sbjct: 121 NVSSYKDLPLTMYQIQWKFRDEIRPRFGVMRGREFYMKDGYNFDLTKEDALHAYNRHLVT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+ GPIGGD +HEF+VLA+TGE++VF + D + D+D Sbjct: 181 YLRTYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSEITDLTFGAREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++ +++E++T+ YA T + H+E LF+++PE +R ARGIEVG IFYFGTKYS + A Sbjct: 241 NVEQCQAVLEEFTSRYARTDETHDEALFNAVPEERRRVARGIEVGQIFYFGTKYSEALGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T + ADG+ V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 TVQTADGQSVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDDE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE++YA L+ +G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACEQLYAALTAIGLEPLYDDRKERAGGKFASMDLIGLPWRITVGPRGLKNGVVEVTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R TG E+MS E+ + + ++N+ Sbjct: 421 RRTGESEEMSPEDAVKKIAAIYANH 445 >gi|254294083|ref|YP_003060106.1| prolyl-tRNA synthetase [Hirschia baltica ATCC 49814] gi|254042614|gb|ACT59409.1| prolyl-tRNA synthetase [Hirschia baltica ATCC 49814] Length = 441 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 237/440 (53%), Positives = 328/440 (74%), Gaps = 3/440 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK+FLP+L+E P +A+I SH+LMLR GM+ Q GIY+WLPLG + L + I+REE Sbjct: 1 MRLSKFFLPVLKETPAEAKIISHQLMLRAGMVKQTGSGIYTWLPLGLRVLKKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PT+Q ADLW ESGRYD+YGKEMLR+ DR+D+ M++GPT+EEV+TDIFRS Sbjct: 61 QNRAGAIELLMPTIQPADLWKESGRYDAYGKEMLRITDRHDREMLFGPTNEEVITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ ++ SY KMF + Sbjct: 121 YVKSYKQLPLNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDVNEVEARKSYYKMFCA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL F R+GLK++PMRA++GPIGGDLSHEFI+LA+TGE++VFC + ++ P P + DFD Sbjct: 181 YLNTFSRMGLKAVPMRADTGPIGGDLSHEFIILAETGESEVFCDAELVNMPPPGLDLDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + E+ T YAAT ++H++ F+S +PE +RVSARGIEVGHIF FGTKYS PM Sbjct: 241 SDLLGEF--EKRTQYYAATEEMHDQTKFESEVPEERRVSARGIEVGHIFNFGTKYSEPMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A +GK+ V MGSYG+G R++ A+IE+ HD KG+IWP+ VAPFK +++N++ D+ Sbjct: 299 AKVMTPEGKEAPVHMGSYGVGVSRLLGAIIEACHDDKGVIWPEEVAPFKSAVVNLRQGDE 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 C ACE +YA+L G D +DD ++ G++ + +L+G P +++G + + + VE+K Sbjct: 359 ACDKACEDVYAKLRATGLDPMYDDRDDRPGAKLSTLELIGIPKAIVIGPRGLKNGVVEVK 418 Query: 420 HRLTGIREDMSLEEVINYAS 439 R++G+ E+MSL+ +N + Sbjct: 419 DRISGVTEEMSLDAALNKLT 438 >gi|163868357|ref|YP_001609566.1| prolyl-tRNA synthetase [Bartonella tribocorum CIP 105476] gi|189083488|sp|A9IUL1|SYP_BART1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|161018013|emb|CAK01571.1| Prolyl-tRNA synthetase [Bartonella tribocorum CIP 105476] Length = 441 Score = 405 bits (1040), Expect = e-110, Method: Composition-based stats. Identities = 267/439 (60%), Positives = 338/439 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP++AEI SH+ MLR GMI Q + GIYSWLPLG+K LD V IIREE Sbjct: 1 MRLSQYFLPLLKENPKEAEIVSHRFMLRAGMIRQQTSGIYSWLPLGKKVLDKVCKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GAIE+ +PT+QSADLW ESGRYD YG EMLR+ DR + ++YGPT+EE++TDIFRS Sbjct: 61 QERAGAIEILMPTIQSADLWRESGRYDDYGLEMLRIKDRQKRDLLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMR+REFLMKDAYSFDL EGSK SYN+MFV+ Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEIRPRFGVMRAREFLMKDAYSFDLDYEGSKTSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGLK+IPMRA++GPIGG LSHEFI+LA+TGE+ +FC K F++ +P+ + DF Sbjct: 181 YLRTFSRLGLKAIPMRADTGPIGGKLSHEFIILAETGESAIFCDKQFLELSVPNSSIDFS 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L+ V+QWT+ YAAT ++HNE+ + L E R+SARGIEVGHIF+FGTKYS PM A Sbjct: 241 DKAVLDDTVKQWTSFYAATEEMHNEEEWARLSEENRLSARGIEVGHIFHFGTKYSAPMEA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK+H V MGSYGIG R+VAA IE+SHD KGIIWP S+APF +IN+K D+ Sbjct: 301 KVMGQDGKEHVVSMGSYGIGPSRLVAAAIEASHDEKGIIWPKSMAPFDFGIINMKPDDEK 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACE +Y L G D F DD E+ GS+FA DL+G P Q+IVG ++ ++VEIK Sbjct: 361 CTQACEFLYQGLKDAGFDPFLDDRNERPGSKFATMDLIGLPTQIIVGPNSIAHNEVEIKD 420 Query: 421 RLTGIREDMSLEEVINYAS 439 R TG ++ + +E+V++ S Sbjct: 421 RKTGAKKSLKVEDVLSQLS 439 >gi|209885076|ref|YP_002288933.1| prolyl-tRNA synthetase [Oligotropha carboxidovorans OM5] gi|226701315|sp|B6JH58|SYP_OLICO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|209873272|gb|ACI93068.1| prolyl-tRNA synthetase [Oligotropha carboxidovorans OM5] Length = 441 Score = 405 bits (1040), Expect = e-110, Method: Composition-based stats. Identities = 256/439 (58%), Positives = 330/439 (75%), Gaps = 3/439 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++YFLPIL+E P++AEIASH+LMLR GM+ Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLTRYFLPILKETPKEAEIASHRLMLRAGMLRQEAAGIYAWLPLGFRVLKKIERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GAIE+ +PTLQ ADLW ESGRYD+YG EMLR+ADR+ + ++YGPT+EE++T+IFRS Sbjct: 61 QNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIADRHKRELLYGPTNEEMITEIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSYRNLP Y IQ KFRDE RPRFGVMR REFLMKDAYSFDL ++ SYNKMFV+ Sbjct: 121 YVKSYRNLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDLDEAAARLSYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLA+TGE+ VFC+KD +D P+P E+ D+D Sbjct: 181 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVFCNKDVLDLPVPGEDVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L I++QWT YAAT DVH+ +++ +P KRV+ RGIEVG IFYFGTKYS M Sbjct: 241 S--DLTPIIKQWTELYAATEDVHDAARYETEVPAEKRVNTRGIEVGQIFYFGTKYSDSMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG + V GSYG+G R+V A+IE+ HD GI WP++VAPF ++++N+K Sbjct: 299 ALVVGPDGVEKPVHSGSYGVGVSRLVGAIIEACHDENGIKWPEAVAPFTVAILNLKQGAS 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACEK+Y L+ G DV +DD ++ G +FA ADL+G P Q+++G K +++ KVEIK Sbjct: 359 DTDAACEKLYRALTANGVDVLYDDTDQRPGGKFATADLIGIPWQILIGPKGLAEGKVEIK 418 Query: 420 HRLTGIREDMSLEEVINYA 438 R G RE MS E+ + Sbjct: 419 CRADGSRELMSPEDALARF 437 >gi|49474193|ref|YP_032235.1| prolyl-tRNA synthetase [Bartonella quintana str. Toulouse] gi|81827622|sp|Q6FZX5|SYP_BARQU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|49239697|emb|CAF26072.1| Prolyl-tRNA synthetase [Bartonella quintana str. Toulouse] Length = 441 Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats. Identities = 267/438 (60%), Positives = 341/438 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP++AEI SH+LMLR GMI Q + GIYSWLPLG+K LD V IIREE Sbjct: 1 MRLSQYFLPLLKENPKEAEIISHRLMLRAGMIRQQTSGIYSWLPLGKKVLDKVCKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GA+E+ +PT+QSADLW ESGRYD YG EMLR+ DR + ++YGPT+EE++TDIFRS Sbjct: 61 QERAGAVEILMPTVQSADLWRESGRYDDYGLEMLRIKDRQKRDLLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++ SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EGSK SYN+MFV+ Sbjct: 121 YVHSYKDLPLNLYHIQWKFRDEIRPRFGVMRSREFLMKDAYSFDLDYEGSKTSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F LGLK+IPMRA++GPIGG+LSHEFI+LA+TGE+ +FC K F + +P + DF Sbjct: 181 YLRTFSCLGLKAIPMRADTGPIGGELSHEFIILAETGESAIFCDKKFFELTVPHSSIDFS 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L +IV+QWT+ YAAT ++HNE+ + + +N R+SARGIEVGHIF+FGTKYS PM A Sbjct: 241 DKAVLANIVKQWTSFYAATEEMHNEEEWAKVSDNDRLSARGIEVGHIFHFGTKYSAPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK+H V MGSYGIG R+VAAVIE+SHD GIIWP S+APF +IN+K +D+ Sbjct: 301 KVMGQDGKEHLVSMGSYGIGPSRLVAAVIEASHDENGIIWPKSIAPFDFGIINMKPNDEK 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACE +Y+ L + G D DD E+ GS+FA DL+G P Q+IVG K ++ ++VEIK Sbjct: 361 CTRACETLYSGLMQAGFDPLLDDRNERPGSKFATMDLIGLPTQIIVGPKSIAQNEVEIKD 420 Query: 421 RLTGIREDMSLEEVINYA 438 R TG+++ +++E V+N Sbjct: 421 RKTGVKKSLTVENVLNQF 438 >gi|259416086|ref|ZP_05740006.1| prolyl-tRNA synthetase [Silicibacter sp. TrichCH4B] gi|259347525|gb|EEW59302.1| prolyl-tRNA synthetase [Silicibacter sp. TrichCH4B] Length = 451 Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats. Identities = 227/445 (51%), Positives = 321/445 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A++ SH+ MLR GMI Q + GIYSWLPLG + L + I+ EE Sbjct: 1 MRLSRYFLPVLKETPSEAQVVSHRYMLRAGMIKQSAAGIYSWLPLGYRVLKKIEGIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PT+QSADLW ESGRYD+YG+EMLR+ DR+D+ M++ PT EE++TDIFRS Sbjct: 61 QMRAGHIPMLMPTIQSADLWRESGRYDAYGEEMLRIRDRHDRDMLFTPTAEELITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++ SY++LP T YQIQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ V+ Sbjct: 121 NVSSYKDLPLTMYQIQWKFRDEIRPRFGVMRGREFYMKDGYNFDLTKEDALHAYNRHLVT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+ GPIGGD +HEF+VLA+TGE++VF + D + D+D Sbjct: 181 YLRTYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSEITDLSFGAREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +++E++T+ YA T + H+E LF+++PE++R ARGIEVG IFYFGTKYS + A Sbjct: 241 SVEQCQAVLEEFTSRYARTDETHDEALFNAVPEDRRRVARGIEVGQIFYFGTKYSEALGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T + A+G V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 TVQTAEGDSVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDDE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE++YA L+ +G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACEQLYAALTAIGLEPLYDDRKERAGGKFASMDLIGLPWRITVGPRGLKNGVVEVTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R +G E+MS E+ + + ++N+ Sbjct: 421 RRSGESEEMSPEDAVKKIAAIYANH 445 >gi|83592911|ref|YP_426663.1| prolyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170] gi|114152243|sp|Q2RU19|SYP_RHORT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|83575825|gb|ABC22376.1| Prolyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170] Length = 435 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 258/438 (58%), Positives = 319/438 (72%), Gaps = 5/438 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ LP L+E P +AEI SH+LMLR GMI QH+ GIY+WLPLG + L + ++REE Sbjct: 1 MRLSRFLLPTLKETPSEAEIVSHRLMLRAGMIRQHASGIYNWLPLGLRVLRKIEQVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+ TGA E+ +PT+QSADLW ESGRYD YGKEMLR+ DR+++ M+YGPTHEEV TD+FR Sbjct: 61 QDATGAQEILMPTIQSADLWRESGRYDDYGKEMLRIVDRHERDMLYGPTHEEVATDVFRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSYR LP YQIQ KFRDE+RPRFGVMR REFLMKD YSFDLT EG++HSYNKMFV+ Sbjct: 121 NVKSYRALPQNLYQIQWKFRDEVRPRFGVMRGREFLMKDNYSFDLTYEGARHSYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLGLK+IPM A++GPIGG LSHEFI+LADTGE+ VFC +D +D P P EN D+D Sbjct: 181 YLRTFARLGLKAIPMAADTGPIGGKLSHEFIILADTGESAVFCHRDLLDKPAP-ENVDYD 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L +V+ WT+ YAAT ++H +PE VSARGIEVGHIF+FGTKYS PM A Sbjct: 240 S--DLQPLVDSWTSLYAATDEMHRPD--HGVPEGDLVSARGIEVGHIFHFGTKYSAPMGA 295 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T DG V MGSYGIG R+VA +IE+SHD GIIWPD VAPF I +IN+K D Sbjct: 296 TVTAPDGSSQAVFMGSYGIGVSRLVAGIIEASHDDNGIIWPDGVAPFDIGVINLKVGDAA 355 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C +Y RL G DV +DD ++ G++FA DL+G P QVI G K V+ VE+K Sbjct: 356 TDGVCADLYGRLRAAGKDVLFDDTDDRAGAKFATMDLIGLPWQVIAGPKGVAKGMVELKE 415 Query: 421 RLTGIREDMSLEEVINYA 438 R TG R ++S++ + Sbjct: 416 RATGERHELSIDSALAKL 433 >gi|84501591|ref|ZP_00999763.1| prolyl-tRNA synthetase [Oceanicola batsensis HTCC2597] gi|84390212|gb|EAQ02771.1| prolyl-tRNA synthetase [Oceanicola batsensis HTCC2597] Length = 445 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 233/443 (52%), Positives = 320/443 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P DA+I SH+ MLR GMI Q S GIYSWLPLG + L + I+ EE Sbjct: 1 MRLSRYFLPVLKETPADAQIVSHRYMLRAGMIKQASAGIYSWLPLGYRVLRRIEQIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PTLQSADLW ESGRYD+YG EMLR+ DR+D+ M++GPT+EE++TDIFRS Sbjct: 61 QQRAGHIPLLMPTLQSADLWRESGRYDAYGPEMLRIRDRHDRDMLFGPTNEELITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 YVRSYKDLPMTLYHIQWKFRDEVRPRFGVMRGREFLMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLA+TGE++VF + D D+D Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSEITDLKFGDREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +++E++T+ YA T + H+E++F+ +PE++R ARGIEVG IFYFGTKYS PM A Sbjct: 241 SVEQCQAVLEEFTSRYARTDETHDEEVFNRIPEDRRRVARGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF + ++N+K D Sbjct: 301 TVQGPDGKQVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHVGIVNLKQGDDE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+ +Y + +G D +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACQALYDGFTALGLDPLYDDRDERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R TG E++ EE + + ++ Sbjct: 421 RRTGESEELPPEEAVRRVAAIYA 443 >gi|254441019|ref|ZP_05054512.1| prolyl-tRNA synthetase [Octadecabacter antarcticus 307] gi|198251097|gb|EDY75412.1| prolyl-tRNA synthetase [Octadecabacter antarcticus 307] Length = 453 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 236/445 (53%), Positives = 314/445 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E+PRDA I SH+ MLR GMI Q S GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKESPRDATIVSHQYMLRAGMIKQSSAGIYSWLPLGFKVLKRIEQIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PT+QSADLW ESGRYD YG EMLR+ DRN ++YGPT+EE++TDIFRS Sbjct: 61 QERAGHIAMLMPTIQSADLWRESGRYDDYGDEMLRITDRNKNDLLYGPTNEELITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY+ LP T Y IQ KFRDE RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVSSYKALPLTLYHIQWKFRDERRPRFGVMRGREFYMKDGYTFDLTKEDAMHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLADTGE++VF D + D+D Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLADTGESEVFYDAAVTDLSFGDRDIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ ++E++TA YA T + H++ LFD++P +++ +ARGIEVG IFYFGTKYS M A Sbjct: 241 DVTQCAEVMEEFTAKYARTDETHDQALFDAIPADRQRTARGIEVGQIFYFGTKYSDAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF + ++N+K D Sbjct: 301 TVQGPDGKPTPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHVGIVNLKQGDAD 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+ +YA ++ +G + +DD E+ GS+F D++G P ++ VG + + + VE+ Sbjct: 361 ADAACQSLYAAVAALGLEALYDDRDERAGSKFGTMDMIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R TG E+M E+ I + + Sbjct: 421 RKTGESEEMPPEQAIAKIGEIYRAH 445 >gi|159043296|ref|YP_001532090.1| prolyl-tRNA synthetase [Dinoroseobacter shibae DFL 12] gi|189083497|sp|A8LQU6|SYP_DINSH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157911056|gb|ABV92489.1| prolyl-tRNA synthetase [Dinoroseobacter shibae DFL 12] Length = 445 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 234/443 (52%), Positives = 309/443 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A+I SH+LMLR GMI Q S GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKETPAEAQIVSHRLMLRAGMIKQASAGIYSWLPLGYKVLRRIEEIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PTLQSADLW ESGRYD YG+EMLR+ DR+ + M+YGPT+EE++TDIFRS Sbjct: 61 QQRAGHIPMLMPTLQSADLWRESGRYDDYGQEMLRITDRHGRDMLYGPTNEELITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 NVGSYKDLPLTLYHIQWKFRDEVRPRFGVMRGREFLMKDGYNFDLTKEAALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+ GPIGGD +HEF+VLA+TGE++VF + D D+D Sbjct: 181 YLRSYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDAEITDLSFGDRQIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ +++E++T+ YA T + H+ F +PE +R SARGIEVG IFYFGTKYS M A Sbjct: 241 DVGQCQAVLEEFTSRYARTDETHDPDAFAKVPEARRRSARGIEVGQIFYFGTKYSDAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T D V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 TVIDKDQNQVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDAA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +Y L+K G + +DD E+ G +FA DL+G P ++ VG + + VE+ Sbjct: 361 ADAACEGLYDALTKAGLEPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKAGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R TG E++S E + R++ Sbjct: 421 RKTGESEELSPEAAVAKVVARYA 443 >gi|329850610|ref|ZP_08265455.1| prolyl-tRNA synthetase [Asticcacaulis biprosthecum C19] gi|328840925|gb|EGF90496.1| prolyl-tRNA synthetase [Asticcacaulis biprosthecum C19] Length = 443 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 245/438 (55%), Positives = 330/438 (75%), Gaps = 4/438 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLP+L+ENP +A+I SH+LMLRTGMI Q + GIY+WLPLG K L V I+ EE Sbjct: 1 MRLSRFFLPLLKENPAEAQIVSHRLMLRTGMIRQQAAGIYAWLPLGLKVLRKVERIVEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G+I++ +PTLQ ADLW ESGRY+ YG+EMLR+ DR+D+ ++YGPT EE +T++FR+ Sbjct: 61 MARAGSIQLLMPTLQLADLWRESGRYEDYGQEMLRIKDRHDRDLLYGPTAEEAVTEVFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP YQI KFRDE RPRFGVMR REFLMKDAYSFD+ ++ +YN+MF++ Sbjct: 121 SVKSYKDLPLNLYQISWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEASARKAYNRMFIA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL F R+GLK++PMRA++GPIGGDLSHEFI+LADTGE+ VFC KD +D P P + D++ Sbjct: 181 YLNTFSRMGLKAVPMRADTGPIGGDLSHEFIILADTGESAVFCHKDLVDMPAPGHDVDWN 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ L V+Q TA YAAT ++H+E F +PE+K++SARGIEVGHIFYFG KYS PM A Sbjct: 241 DLQGL---VDQRTALYAATEEMHDEAAFGEVPEDKKLSARGIEVGHIFYFGEKYSKPMKA 297 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G DG+ GSYG+G R++ A+IE+SHD GIIWP+SVAPF +++IN++ D+ Sbjct: 298 TVNGPDGEVTVHM-GSYGVGVSRLLGAIIEASHDEAGIIWPESVAPFDVAVINLRPGDEA 356 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACEK YA L+ G DV ++D E+ G++FA DL+G P Q+I+G K +++ KVE+K Sbjct: 357 CDAACEKAYAALTAAGRDVLYNDTDERPGAKFASMDLIGIPWQLIIGPKGLAEGKVELKQ 416 Query: 421 RLTGIREDMSLEEVINYA 438 R TG R+ ++V+N Sbjct: 417 RATGERQTALFDDVLNQL 434 >gi|260575893|ref|ZP_05843888.1| prolyl-tRNA synthetase [Rhodobacter sp. SW2] gi|259021819|gb|EEW25120.1| prolyl-tRNA synthetase [Rhodobacter sp. SW2] Length = 445 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 234/443 (52%), Positives = 317/443 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++YFLP+L+ENP +A+I SH+ MLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 1 MRLTRYFLPVLKENPAEAQIVSHRYMLRAGMIKQQAAGIYSWLPLGFKVLRRIEQIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PTLQ ADLW ESGRYD YG+EMLR+ DR + ++YGPT+EE++TDIFRS Sbjct: 61 QQRAGHIPLLMPTLQPADLWRESGRYDDYGEEMLRITDRQKRELLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVTSYKDLPLTLYHIQWKFRDEMRPRFGVMRGREFLMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLA TGE++VF D + + D+D Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLAATGESEVFYDSAVTDIRLGAREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D ++++++T+ YA T + H+E LF+++PE +R SARGIEVG IF+FGTKYS M A Sbjct: 241 DKAQCAAVMQEFTSLYARTDETHDESLFNAIPEERRRSARGIEVGQIFFFGTKYSEAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T DG VQMGS+GIG R++ A+IE+SHD KGIIWP+ V PF + ++N+K D Sbjct: 301 TVVTPDGSRVPVQMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHVGIVNLKQGDNG 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE IY L G D +DD E+ G++FA DL+G P ++ VG + +++ KVE+ Sbjct: 361 TDAACEAIYKALKARGLDPLYDDRDERAGAKFATMDLIGLPWRITVGPRGLANGKVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R +G+ E+MS E+ + ++ Sbjct: 421 RRSGVSEEMSAEDAVARVVEIYA 443 >gi|148255883|ref|YP_001240468.1| prolyl-tRNA synthetase [Bradyrhizobium sp. BTAi1] gi|166980102|sp|A5EK68|SYP_BRASB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|146408056|gb|ABQ36562.1| Prolyl-tRNA synthetase [Bradyrhizobium sp. BTAi1] Length = 444 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 250/439 (56%), Positives = 326/439 (74%), Gaps = 3/439 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+ENP++AEI SH+LMLR GM+ Q + GIY+WLPLG K L + I+REE Sbjct: 1 MRLSRFFLPILKENPKEAEIVSHRLMLRAGMLRQEAAGIYAWLPLGFKVLKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA+E+ +PTLQ ADLW ESGRYD+YG EMLR++DR+ + ++YGPT+EE++TDIFR+ Sbjct: 61 QNRAGALELLMPTLQLADLWRESGRYDAYGPEMLRISDRHKRELLYGPTNEEMITDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSYRNLP Y IQ KFRDE RPRFGVMR REFLMKDAYSFDL G++ +YNKMFV+ Sbjct: 121 YVKSYRNLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDLDEAGARRAYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK IPMRAE+GPIGGDLSHEFIVLA+TGE+ V+C +D +D PIP + D+D Sbjct: 181 YLRTFARMGLKGIPMRAETGPIGGDLSHEFIVLAETGESGVYCDRDVLDLPIPPASVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L I++QWT+ YAAT DVH+ F++ +PE +R+ RGIEVG IFYFGTKYS PM Sbjct: 241 --GDLTPIIKQWTSLYAATEDVHDGARFEAEVPEERRLHTRGIEVGQIFYFGTKYSEPMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG + + GSYG+G R+ A+IE+ HD GI WP+ VAPF+ ++N+K Sbjct: 299 ALVAGPDGAEVTIHGGSYGVGVSRLAGAIIEACHDDAGIKWPEEVAPFRAVILNLKQGGS 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACE++Y L G DV +DD ++ G +FA ADL+G P Q++VG K +++ KVE+K Sbjct: 359 DTDAACEQLYRDLLAKGVDVLYDDTEQRAGGKFATADLIGIPWQIMVGPKSLAEGKVEVK 418 Query: 420 HRLTGIREDMSLEEVINYA 438 R G R+ MS +V+ Sbjct: 419 TRSDGARQMMSPADVVARL 437 >gi|84683507|ref|ZP_01011410.1| prolyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654] gi|84668250|gb|EAQ14717.1| prolyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654] Length = 444 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 231/440 (52%), Positives = 313/440 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A+IASH+LMLR GMI Q + GIYSWLPLG K L N+ I+ EE Sbjct: 1 MRLSRYFLPVLKETPSEAQIASHRLMLRAGMIKQQAAGIYSWLPLGYKVLKNIERIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PTLQSADLW ESGRYD YG+EMLR+ DR+ + M+YGPT+EE++TDIFR+ Sbjct: 61 QQRAGHIPILMPTLQSADLWRESGRYDDYGQEMLRITDRHGRDMLYGPTNEEMVTDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVGSYKDLPLTLYHIQWKFRDEIRPRFGVMRGREFFMKDGYNFDLTREDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+ GPIGGD +HEF+VLA+TGE++VF + D D+D Sbjct: 181 YLRTYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSEITDLKFGDREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + +++E++T+ YA T + H+E LF+ +PE +R ARGIEVG IFYFGTKYS M A Sbjct: 241 SVEACQAVLEEFTSRYARTDETHDEALFNEIPEERRRVARGIEVGQIFYFGTKYSEAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T + +DG V+MGS+GIG R+V A+IE++HD KGIIWP+ V PF ++N+K D Sbjct: 301 TVQDSDGNKVPVEMGSHGIGVSRLVGALIEANHDDKGIIWPEGVTPFHCGIVNLKQGDDE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +Y L+ G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACETLYKALTAAGLEPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASH 440 R TG E+++ E + Sbjct: 421 RRTGESEELAPEAAVAKVRE 440 >gi|163740902|ref|ZP_02148295.1| prolyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10] gi|161385893|gb|EDQ10269.1| prolyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10] Length = 451 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 233/446 (52%), Positives = 313/446 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+ MLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPSEAQIVSHRYMLRAGMIKQSAAGIYSWLPLGFKVLKKIETIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PTLQSADLW ESGRYD YG+EMLR++DR+ + M+YGPT+EE++TDIFRS Sbjct: 61 QMRAGHIPMLMPTLQSADLWKESGRYDDYGQEMLRISDRHGRDMLYGPTNEELITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVGSYKDLPLTLYHIQWKFRDEIRPRFGVMRGREFYMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+ GPIGGD +HEF+VLADTGE++VF D D+D Sbjct: 181 YLRSYERMGLQAIPMRADGGPIGGDYTHEFLVLADTGESEVFYDSAVTDLTFGDRAIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + ++E++T+ YA T + H+E LF+ +PE +R ARGIEVG IFYFGTKYS + A Sbjct: 241 SVEQCQGVLEEFTSKYARTDETHDEALFNEVPEERRRVARGIEVGQIFYFGTKYSEALGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 NVQGPDGKQSPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDAE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +Y L+ G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACESLYEALTAAGLEPLYDDRKERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R +G E++S E + ++N++ Sbjct: 421 RRSGESEELSPEAAVQKIVEIYANHQ 446 >gi|163737417|ref|ZP_02144834.1| prolyl-tRNA synthetase [Phaeobacter gallaeciensis BS107] gi|161388943|gb|EDQ13295.1| prolyl-tRNA synthetase [Phaeobacter gallaeciensis BS107] Length = 451 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 233/446 (52%), Positives = 313/446 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+ MLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPSEAQIVSHRYMLRAGMIKQSAAGIYSWLPLGFKVLKKIETIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PTLQSADLW ESGRYD YG+EMLR++DR+ + M+YGPT+EE++TDIFRS Sbjct: 61 QMRAGHIPMLMPTLQSADLWKESGRYDDYGQEMLRISDRHGRDMLYGPTNEELITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVGSYKDLPLTLYHIQWKFRDEIRPRFGVMRGREFYMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+ GPIGGD +HEF+VLADTGE++VF D D+D Sbjct: 181 YLRSYERMGLQAIPMRADGGPIGGDYTHEFLVLADTGESEVFYDSAVTDLTFGDRAIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + ++E++T+ YA T + H+E LF+ +PE +R ARGIEVG IFYFGTKYS + A Sbjct: 241 SVEQCQGVLEEFTSKYARTDETHDEALFNEVPEERRRVARGIEVGQIFYFGTKYSEALGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 NVQGPDGKQSPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDDE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +Y L+ G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACESLYEALTAAGLEPLYDDRKERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R +G E++S E + ++N++ Sbjct: 421 RRSGESEELSPEAAVQKIVEIYANHQ 446 >gi|49475642|ref|YP_033683.1| prolyl-tRNA synthetase [Bartonella henselae str. Houston-1] gi|81827712|sp|Q6G3A4|SYP_BARHE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|49238449|emb|CAF27677.1| Prolyl-tRNA synthetase [Bartonella henselae str. Houston-1] Length = 441 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 269/439 (61%), Positives = 339/439 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP++AEI SH+LMLR GMI Q + GIYSWLPLG+K LD + IIREE Sbjct: 1 MRLSQYFLPLLKENPKEAEIISHRLMLRAGMIRQQTSGIYSWLPLGKKVLDKICKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GAIE+ +PT+QSADLW ES RYD YG EMLR+ DR + ++YGPT+EE++TDIFRS Sbjct: 61 QERAGAIEILMPTIQSADLWRESDRYDDYGLEMLRIKDRQKRDLLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I+SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EGSK SYN+MFV+ Sbjct: 121 YIRSYKDLPLNLYHIQWKFRDEIRPRFGVMRSREFLMKDAYSFDLDYEGSKISYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F LGLK+IPMRA++GPIGG LSHEFI+LA+TGE+ +FC K F++ +P + DF Sbjct: 181 YLRTFSCLGLKAIPMRADTGPIGGKLSHEFIILAETGESAIFCDKHFLELTVPDSSIDFS 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L +IV+QWT+ YAAT ++H+E+ + + +N R+SARGIEVGHIF+FGTKYS PM A Sbjct: 241 DKAILANIVKQWTSFYAATEEMHDEEEWAKISDNNRLSARGIEVGHIFHFGTKYSAPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK+H V MGSYGIG R+VAAVIE+SHD GIIWP S+APF +IN+K D+ Sbjct: 301 KVMGQDGKEHLVSMGSYGIGPSRLVAAVIEASHDENGIIWPKSIAPFDFGIINMKPDDEK 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ACE +Y L G D DD E+ GS+FA DL+G P Q+IVG K V+ ++VEIK Sbjct: 361 CTHACETLYKGLRYAGFDPLLDDRNERPGSKFATMDLIGLPTQIIVGPKSVAQNEVEIKD 420 Query: 421 RLTGIREDMSLEEVINYAS 439 R TGI++ +++E V+N S Sbjct: 421 RKTGIKKSLTVENVLNQFS 439 >gi|83954043|ref|ZP_00962763.1| prolyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1] gi|83841080|gb|EAP80250.1| prolyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1] Length = 446 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 236/439 (53%), Positives = 316/439 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+LMLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPSEAQIVSHRLMLRAGMIKQSAAGIYSWLPLGFKVLRKIETIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PTLQSADLW ESGR+D+YG EMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 61 QQRAGHIPMLMPTLQSADLWKESGRFDAYGPEMLRIKDRQDRDMLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ V+ Sbjct: 121 HVGSYKDLPMTLYHIQWKFRDEVRPRFGVMRGREFLMKDGYTFDLTKEDALHAYNRHLVT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLA+TGE++VF + D+D Sbjct: 181 YLRSYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSQITELKFGDREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +++E++T+ YA T + H+E LF +P ++ SARGIEVG IFYFGTKYS PM A Sbjct: 241 SVDQCQAVMEEFTSRYARTDETHDEALFAEVPAERQRSARGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF + ++N+K D+ Sbjct: 301 TVQGPDGKPVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHVGIVNLKQGDEQ 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+ +YA L +G D +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACDALYASLQALGLDPLYDDTKERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYAS 439 R TG E+M+ E + + Sbjct: 421 RRTGESEEMTPEAAVEKIA 439 >gi|299135009|ref|ZP_07028200.1| prolyl-tRNA synthetase [Afipia sp. 1NLS2] gi|298589986|gb|EFI50190.1| prolyl-tRNA synthetase [Afipia sp. 1NLS2] Length = 445 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 249/442 (56%), Positives = 330/442 (74%), Gaps = 3/442 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +++FLPIL+E P++AEI SH+LMLR GM+ Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLTRFFLPILKETPKEAEIVSHRLMLRAGMMRQEAAGIYAWLPLGFRVLKKIEKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GAIE+ +PTLQ ADLW ESGRYD+YG EMLR+ DR+ + ++YGPT+EE++T+IFR+ Sbjct: 61 QDRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIQDRHKRELLYGPTNEEMITEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSYR+LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ ++ SYNKMFV+ Sbjct: 121 YVKSYRSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDIDEAAARLSYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRAE+GPIGGDLSHEFIVLA+TGE+ VFC+KD +D P+P + ++D Sbjct: 181 YLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVFCNKDVLDLPVPGADVNYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L I++QWT YAAT DVH+ ++ +P +KRV+ RGIEVG IFYFGTKYS M Sbjct: 241 --GDLTPIIKQWTELYAATEDVHDTARYEKEVPADKRVNTRGIEVGQIFYFGTKYSDSMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G+DG + + GSYGIG R+V A+IE+ HD GI WP+ VAPF+++++N+K Sbjct: 299 ALVVGSDGAEKPIHGGSYGIGVSRLVGAIIEACHDENGIQWPEEVAPFRVAILNLKQGAA 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACEK+Y LS G DV +DD ++ G +FA ADL+G P Q++VG K +++ KVEIK Sbjct: 359 DTDTACEKLYKELSAAGVDVLYDDTDQRPGGKFATADLIGIPWQILVGPKGLAEGKVEIK 418 Query: 420 HRLTGIREDMSLEEVINYASHR 441 R G RE MS++E + + Sbjct: 419 KRADGSREMMSVDEASRHFQTK 440 >gi|254511426|ref|ZP_05123493.1| prolyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11] gi|221535137|gb|EEE38125.1| prolyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11] Length = 456 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 233/443 (52%), Positives = 314/443 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+LMLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 11 MRLSRYFLPVLKENPSEAQIVSHRLMLRAGMIKQAAAGIYSWLPLGFKVLRKLENIVHEE 70 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +P LQSADLW ESGRYD YG+EMLR+ DR+D+ M++ PT EE++TDIFR Sbjct: 71 QARAGHIAIQMPILQSADLWRESGRYDGYGQEMLRMKDRHDRDMLFTPTAEELVTDIFRG 130 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T YQIQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 131 HVSSYKDLPLTLYQIQWKFRDEIRPRFGVMRGREFYMKDGYNFDLTMEDALHAYNRHLVS 190 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLA+TGE++VF D + D+D Sbjct: 191 YLRTYERMGLQAIPMRADSGPIGGDYTHEFLVLAETGESEVFYDSAVTDLTFGDRDIDYD 250 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +I++++T+ YA T + H+E LFD +PE++R ARGIEVG IFYFGT YS M A Sbjct: 251 NRDQCQAIMDEFTSKYARTDETHDEALFDQVPEDRRRVARGIEVGQIFYFGTNYSEAMGA 310 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 311 TVQGPDGKPVPVHMGSHGIGVSRLIGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDDE 370 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+ +YA L+ +G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 371 ADAACDTLYAALTALGLEPLYDDRKERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 430 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R TG E++S E + + + Sbjct: 431 RRTGESEELSPEAAVAKIAEIYK 453 >gi|83942873|ref|ZP_00955333.1| prolyl-tRNA synthetase [Sulfitobacter sp. EE-36] gi|83845881|gb|EAP83758.1| prolyl-tRNA synthetase [Sulfitobacter sp. EE-36] Length = 446 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 237/439 (53%), Positives = 315/439 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+LMLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPSEAQIVSHRLMLRAGMIKQSAAGIYSWLPLGFKVLRKIETIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PTLQSADLW ESGR+D+YG EMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 61 QQRAGHIPMLMPTLQSADLWKESGRFDAYGPEMLRIKDRQDRDMLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ V+ Sbjct: 121 HVGSYKDLPMTLYHIQWKFRDEVRPRFGVMRGREFLMKDGYTFDLTKEDALHAYNRHLVT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLA+TGE++VF + D+D Sbjct: 181 YLRSYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSQITELKFGDREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +++E++T+ YA T + H+E LF +P ++ SARGIEVG IFYFGTKYS PM A Sbjct: 241 SVDQCQAVMEEFTSRYARTDETHDEALFAEVPAERQRSARGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF + ++N+K D+ Sbjct: 301 TVQGPDGKPVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHVGIVNLKQGDEQ 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC +YA L +G D +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACNALYASLQALGLDPLYDDTKERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYAS 439 R TG E+M+ E I + Sbjct: 421 RRTGESEEMTPEAAIEKIA 439 >gi|182678768|ref|YP_001832914.1| prolyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039] gi|226699120|sp|B2IDI9|SYP_BEII9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|182634651|gb|ACB95425.1| prolyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039] Length = 439 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 257/440 (58%), Positives = 335/440 (76%), Gaps = 3/440 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR GMI Q + GIY+WLPLG + L V I+REE Sbjct: 1 MRLSRYFLPILRENPKEAEIVSHRLMLRAGMIRQEAAGIYAWLPLGFRVLQKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GAIE+ +PTLQ ADLW E+GRYD+YG EMLR+ DR+++ ++YGPT+E+++T+IFR+ Sbjct: 61 MDRAGAIELLMPTLQLADLWRETGRYDAYGPEMLRIKDRHERELLYGPTNEDMITEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SYR+LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFDL EG++ SYNKMFV+ Sbjct: 121 YVRSYRDLPKILYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDLDEEGARLSYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLRI+ R+GL +IPMRAE+GPIGGDLSHEFI+LADTGE+ VFC+KD +D PIP E+TD+D Sbjct: 181 YLRIYKRMGLTAIPMRAETGPIGGDLSHEFIILADTGESAVFCNKDVLDLPIPDEHTDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L+ I++QWT+ YAAT DVH+ F+S P KR+ RGIEVG +FYFG KYS PM Sbjct: 241 --GDLSPIIKQWTSLYAATEDVHDAARFESETPPEKRIERRGIEVGQVFYFGEKYSKPMR 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G DG + Q GSYG+G R+V A+IE+SHD GIIWP++VAPF + L N+K D Sbjct: 299 SLITGPDGSEKPFQGGSYGVGVSRLVGAIIEASHDEAGIIWPEAVAPFTVGLANLKVGDA 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 AC +IY RL +G DV +DD ++ G +FA DL+G P Q+IVG K +++ K+E+K Sbjct: 359 ATDAACAEIYERLEALGVDVLYDDTDDRPGGKFAKLDLIGLPYQIIVGPKGLAEGKIEMK 418 Query: 420 HRLTGIREDMSLEEVINYAS 439 R TG RE++S+ VI + Sbjct: 419 TRATGARENLSIAAVIERFT 438 >gi|217976887|ref|YP_002361034.1| prolyl-tRNA synthetase [Methylocella silvestris BL2] gi|254782909|sp|B8EP84|SYP_METSB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|217502263|gb|ACK49672.1| prolyl-tRNA synthetase [Methylocella silvestris BL2] Length = 440 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 249/439 (56%), Positives = 324/439 (73%), Gaps = 3/439 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR GMI Q + GIYSWLPLG + L V I+R+E Sbjct: 1 MRLSRYFLPILRENPKEAEIVSHRLMLRAGMIRQEAAGIYSWLPLGLRVLQKVAEIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +PTLQ ADLW E+GRY++YG EMLR+ DR+++ M+YGPT+E+++T IFRS Sbjct: 61 MNRAGAIELLMPTLQLADLWRETGRYEAYGPEMLRIKDRHEREMLYGPTNEDMITAIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SYR LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ ++ +YN+MFVS Sbjct: 121 YVRSYRELPKILYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAAARLAYNRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLRIF R+GL+ IPMRAE+GPIGGD SHEFI+LA+TGE+ V+C ++ PIP E D+D Sbjct: 181 YLRIFARMGLRVIPMRAETGPIGGDQSHEFIILAETGESAVYCDAGVLNLPIPDETIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFD-SLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L+ IV+QWT+ YAAT DVH+ + F E +R+ RGIEVG +F+FG KYS PM+ Sbjct: 241 --GDLSPIVKQWTSLYAATEDVHDAERFALETTEGQRIETRGIEVGQVFFFGDKYSKPMN 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG + Q GSYG+G R+V A+IE++HD GIIWP SVAPFK+ + N+K D Sbjct: 299 ANIAGPDGVERPFQGGSYGVGVSRLVGALIEANHDEAGIIWPASVAPFKVGIANLKVGDA 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACEK+ A L K G DV +DD ++ G++FA DL+G P Q IVG K +++ K+EIK Sbjct: 359 ATDAACEKLLAALEKAGVDVLYDDSADRPGAKFAKLDLIGLPYQAIVGPKGLAEGKIEIK 418 Query: 420 HRLTGIREDMSLEEVINYA 438 R +G R ++SL+E I Sbjct: 419 TRASGERVELSLDEAIERL 437 >gi|146341083|ref|YP_001206131.1| prolyl-tRNA synthetase [Bradyrhizobium sp. ORS278] gi|166980103|sp|A4YVI0|SYP_BRASO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|146193889|emb|CAL77906.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) [Bradyrhizobium sp. ORS278] Length = 444 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 248/439 (56%), Positives = 326/439 (74%), Gaps = 3/439 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLPIL+ENP++AEI SH+LMLR GM+ Q + GIY+WLPLG K L + I+REE Sbjct: 1 MRLSRFFLPILKENPKEAEIVSHRLMLRAGMLRQEAAGIYAWLPLGFKVLKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA+E+ +PTLQ ADLW ESGRYD+YG EMLR++DR+ + ++YGPT+EE++T+IFR+ Sbjct: 61 QNRAGALELLMPTLQLADLWRESGRYDAYGPEMLRISDRHKRELLYGPTNEEMITEIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSYRNLP Y IQ KFRDE RPRFGVMR REFLMKDAYSFDL G++ +YNKMFV+ Sbjct: 121 YVKSYRNLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDLDEAGARRAYNKMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK IPMRAE+GPIGGDLSHEFIVLA+TGE+ V+C ++ +D PIPS + D+D Sbjct: 181 YLRTFARMGLKGIPMRAETGPIGGDLSHEFIVLAETGESGVYCDRNVLDLPIPSASVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L I+++WT+ YAAT DVH+ F++ +P +RV RGIEVG IFYFGTKYS PM Sbjct: 241 --GDLTPIIKEWTSLYAATEDVHDGARFEAEVPAERRVHTRGIEVGQIFYFGTKYSEPMK 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG + + GSYG+G R+ A+IE+ HD GI WP+ VAPF+ ++N+K Sbjct: 299 ALVAGPDGAEVTIHGGSYGVGVSRLAGAIIEACHDDAGIKWPEEVAPFRAVILNLKQGGS 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACE++Y L G DV +DD ++ G +FA ADL+G P Q++VG K +++ KVE+K Sbjct: 359 DTDAACEQLYRDLLAKGVDVLYDDTEQRAGGKFATADLIGIPWQIMVGPKSLAEGKVEVK 418 Query: 420 HRLTGIREDMSLEEVINYA 438 R G RE MS +++ Sbjct: 419 TRSDGAREMMSPADIVARL 437 >gi|319408595|emb|CBI82250.1| Prolyl-tRNA synthetase [Bartonella schoenbuchensis R1] Length = 441 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 261/439 (59%), Positives = 333/439 (75%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKYF+PIL+ENP++AEI SH+LMLR GMI Q + GIYSWLPLG+K LD V IIREE Sbjct: 1 MRLSKYFIPILKENPKEAEIVSHRLMLRAGMIRQQTAGIYSWLPLGKKVLDKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q + GA+E+ +PT+QS DLW ESGRYD YG EMLR+ DR ++ ++YGPT+EE++TDIFRS Sbjct: 61 QKQAGALEILMPTIQSVDLWHESGRYDDYGFEMLRIKDRQERDLLYGPTNEEIVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP YQIQ KFRDE+RPRFGVMRSREFLMKDAYSFDL E +K SYN+MFV+ Sbjct: 121 YVRSYKDLPLNLYQIQWKFRDEIRPRFGVMRSREFLMKDAYSFDLDYESAKISYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK IP RA++GPIGG+ SHEF +LA+TGE+ +FC K F+D P + DF Sbjct: 181 YLRTFSRMGLKVIPTRADTGPIGGERSHEFTILAETGESAIFCDKQFLDINAPLFSIDFT 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L IV+QWT YAAT ++HNE+ + +P++ ++SARGIEVGHIFYFGTKYS+PM A Sbjct: 241 DKTVLTDIVKQWTTFYAATEEMHNEEEWSKIPKSNQLSARGIEVGHIFYFGTKYSVPMEA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK+H V MGSYGIG R+VAA IE+SHD GIIWP +APF +IN+K D+ Sbjct: 301 KVMGKDGKEHPVFMGSYGIGPSRLVAAAIEASHDENGIIWPKPIAPFDFGIINMKPDDKK 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C CE +Y L + G D DD E+ G +FA+ DL+G P Q+IVG K + ++VEIK Sbjct: 361 CNHMCETLYQGLIRAGFDPLLDDRNERPGVKFAIMDLIGLPTQIIVGPKSAAQNEVEIKD 420 Query: 421 RLTGIREDMSLEEVINYAS 439 R TG +E +++E V+N S Sbjct: 421 RKTGAKESLTIESVLNRLS 439 >gi|163795649|ref|ZP_02189615.1| Prolyl-tRNA synthetase [alpha proteobacterium BAL199] gi|159179248|gb|EDP63781.1| Prolyl-tRNA synthetase [alpha proteobacterium BAL199] Length = 437 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 243/438 (55%), Positives = 312/438 (71%), Gaps = 3/438 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S YFLP +++ PRDAEI SH+LMLR GMI Q S GIYSWLPLG + L + ++REE Sbjct: 1 MRLSGYFLPTMKDTPRDAEIVSHRLMLRAGMIQQASAGIYSWLPLGLRVLKKIEQVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+ G E+ +PT+QSADLW ESGRYD YGKEMLR+ DR+D+ M++GPT+EEV+TDIFR+ Sbjct: 61 QDAAGWQEVLMPTIQSADLWRESGRYDDYGKEMLRIKDRHDRDMLFGPTNEEVITDIFRT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H++SY+ LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFDL E +K +YN+ FV+ Sbjct: 121 HVRSYKALPGRLYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDLDFEAAKRAYNRQFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+ F RLGLK+IPM A+SGPIGGDLSHEFI+LADTGE++VFC KD + D Sbjct: 181 YLKTFDRLGLKAIPMAADSGPIGGDLSHEFIILADTGESEVFCHKD--WLTSEAVPATVD 238 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L IV+ A YAAT + H+ + E V RGIEVGHIFYFGTKYS P+ A Sbjct: 239 YDADLQPIVDACLARYAATDEKHDPA-TCPVAEADLVRTRGIEVGHIFYFGTKYSDPLGA 297 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGKD V MGSYG+G R+V +IE+SHD GI+WP+ VAPFK+ L+N+K D Sbjct: 298 KVAGPDGKDVTVHMGSYGVGVSRLVGGIIEASHDDAGIVWPEPVAPFKVGLVNLKVGDAA 357 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C A E +Y +L K G +V DD E+ G++ A DL+G P QV+VG + +++ VE+K+ Sbjct: 358 CDSATEGLYGKLLKAGIEVLMDDRDERPGAKLAGMDLIGLPWQVVVGPRGLANGIVEMKN 417 Query: 421 RLTGIREDMSLEEVINYA 438 R TG +++M+ + +N Sbjct: 418 RKTGAKDEMTPDAALNRL 435 >gi|241761006|ref|ZP_04759095.1| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753028|ref|YP_003225921.1| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|241374625|gb|EER64086.1| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552391|gb|ACV75337.1| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 443 Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats. Identities = 235/439 (53%), Positives = 316/439 (71%), Gaps = 2/439 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+++E P DA+I SHKLMLR GMI Q + GIY+WLPLG + L + IIREE Sbjct: 1 MRLSRYFLPVMKETPADAQIISHKLMLRAGMIRQTAAGIYAWLPLGLRVLRRIEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GA+E+ +PTLQ+ADLW ESGRYD+YG EMLR+ DR+++ ++YGPT+EE++T + R Sbjct: 61 QARAGALELLMPTLQTADLWRESGRYDAYGPEMLRIKDRHNRELLYGPTNEEMITALIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SYR+LP FY IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ +H+YN+MFV+ Sbjct: 121 NLQSYRDLPRIFYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDIDETAGRHNYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL F RLGL++IPM+A++GPIGGDLSHEFIVLA GE+ VF + + P DFD Sbjct: 181 YLNSFSRLGLRAIPMQADTGPIGGDLSHEFIVLAPNGESDVFYHSN-WEQPTRHIEADFD 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D +L SIV + YAAT + + L ++ +K +RGIEVGHIF+FGTKYS PM Sbjct: 240 DPKALQSIVNDHISDYAATDEKRDP-LREAQAGDKLRQSRGIEVGHIFFFGTKYSKPMGF 298 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G DGK +QMGSYGIG R++ A+IE+SHD GIIWP++VAP+ + LIN++ D+ Sbjct: 299 TLPGPDGKPIPIQMGSYGIGISRLLGAIIEASHDDNGIIWPEAVAPYHVGLINLRIDDEN 358 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 CR + +Y RL G D +DD E+ G++FA DL+G P QV++G K VE+K+ Sbjct: 359 CRAIADSLYQRLEAAGIDTLYDDRNERGGAKFATMDLIGLPWQVVIGPKGAEKGVVELKN 418 Query: 421 RLTGIREDMSLEEVINYAS 439 R +G ++ +S+E+ N + Sbjct: 419 RASGEKQTISVEDAFNLLT 437 >gi|197105248|ref|YP_002130625.1| prolyl-tRNA synthetase [Phenylobacterium zucineum HLK1] gi|226701316|sp|B4RBZ9|SYP_PHEZH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|196478668|gb|ACG78196.1| prolyl-tRNA synthetase [Phenylobacterium zucineum HLK1] Length = 439 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 238/440 (54%), Positives = 322/440 (73%), Gaps = 3/440 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+P L+E P DA+I SH+LMLR GMI Q + GIY+WLPLG K L + ++REE Sbjct: 1 MRLSRYFMPTLREAPSDAQIVSHQLMLRAGMIRQEAAGIYAWLPLGLKVLKKIEQVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GAIE+ +PTLQ ADLW ESGRYD YG+EMLR+ DR+++ ++YGPT EEV+TDIFR+ Sbjct: 61 MDRAGAIEVLMPTLQLADLWRESGRYDDYGEEMLRIKDRHERDLLYGPTAEEVITDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE RPRFGVMR REFLMKDAYSFD+ ++ +YN+MF + Sbjct: 121 YIKSYKDLPKNLYNIQWKFRDERRPRFGVMRGREFLMKDAYSFDIDEAAARRAYNRMFCA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL ++ RLGLK+IP+RA++GPIGGDLSHEFI+LADTGE+QVF +D ++ P + D+D Sbjct: 181 YLNVYARLGLKAIPVRADTGPIGGDLSHEFIILADTGESQVFAHRDLVEMGAPGPDIDWD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L +V+Q T YAA+ ++H++ F++ PE+KR++ARGIEVGHIFYFG KYS PM+ Sbjct: 241 --GDLEPLVQQRTRLYAASDEMHDQARFETEAPEDKRMTARGIEVGHIFYFGEKYSRPMN 298 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG + +V MGSYG+G R+V A+IE+SHD GI+WPDSVAPF +++N++ + Sbjct: 299 AKVAGPDGAERFVHMGSYGVGVSRLVGAIIEASHDEAGIVWPDSVAPFGAAVVNLRPGEA 358 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 E+ Y L G + DD E+ G++FA DL+G P Q+IVG K V++ VEIK Sbjct: 359 AVDAVAEQAYGALQAAGKEPLLDDRDERPGAKFASLDLVGVPWQLIVGPKGVAEGVVEIK 418 Query: 420 HRLTGIREDMSLEEVINYAS 439 R TG R+ + L+ + + Sbjct: 419 RRATGERQTLPLDAALKAIT 438 >gi|110679326|ref|YP_682333.1| prolyl-tRNA synthetase [Roseobacter denitrificans OCh 114] gi|114152246|sp|Q168E6|SYP_ROSDO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|109455442|gb|ABG31647.1| prolyl-tRNA synthetase [Roseobacter denitrificans OCh 114] Length = 451 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 231/443 (52%), Positives = 312/443 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++YF+P+L+ENP +A+I SH+LMLR GMI Q++ GIYSWLPLG K L + I+ EE Sbjct: 1 MRLTRYFMPVLRENPAEAQIVSHRLMLRAGMIKQNAAGIYSWLPLGFKVLRKLENIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G + M +PT+QSADLW ESGRYD+YG EMLR+ DR D+ M++GPT+EE++TDIFRS Sbjct: 61 QIRAGHVPMLMPTMQSADLWRESGRYDAYGPEMLRIRDRQDRDMLFGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVSSYKDLPLTLYHIQWKFRDEMRPRFGVMRGREFFMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLADTGE++VF D + D+D Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLADTGESEVFYDSAVTDLTFGDRDIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + ++E++T YA T + H++ LF ++P ++ ARGIEVG IFYFGTKYS M A Sbjct: 241 SVEQCQGVMEEFTNLYARTDETHDQALFAAIPAERQRQARGIEVGQIFYFGTKYSDAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK V MGS+GIG R+V A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 KVQGPDGKPTAVHMGSHGIGVSRLVGAIIEASHDEKGIIWPEGVTPFHCGIVNLKQGDTE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+ +YA L +G D +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACDALYASLRALGLDPLYDDRKERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R TG ++ EE I + ++ Sbjct: 421 RKTGESSELPPEEAIEKIAKIYA 443 >gi|294852177|ref|ZP_06792850.1| prolyl-tRNA synthetase [Brucella sp. NVSL 07-0026] gi|294820766|gb|EFG37765.1| prolyl-tRNA synthetase [Brucella sp. NVSL 07-0026] Length = 435 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 255/434 (58%), Positives = 332/434 (76%) Query: 8 LPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 +PIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREEQNR GA Sbjct: 1 MPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREEQNRAGAN 60 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR ++ M++GPT+EE++TDIFRS+++SY++ Sbjct: 61 EILMPTIQSADLWRESGRYDAYGKEMLRIQDRQEREMLFGPTNEEMVTDIFRSYVRSYKD 120 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVSYLR F R Sbjct: 121 LPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVSYLRTFAR 180 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 +GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+C + ++D +P +TDF + L Sbjct: 181 VGLQAIPMRADTGPIGGDLSHEFIILAETGESQVYCDRAYLDLAVPGADTDFRNDAQLTD 240 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 IV +WT PYAAT ++H+E + + +VSARGIEVGHIF+FGTKYS PM A +G DG Sbjct: 241 IVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIEVGHIFHFGTKYSEPMGAKVQGPDG 300 Query: 308 KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 K+H V MGSYGIG R+VAA IE+SHD GIIWP ++APF ++N+K D+ C EK Sbjct: 301 KEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWPKAIAPFGAGIVNMKPGDEGCDGVSEK 360 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +Y L+ G D DD E+ G++FA DL+G P QVIVG + V+ +VE+K R TG R+ Sbjct: 361 LYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPTQVIVGPRGVAAGEVEVKDRKTGERQ 420 Query: 428 DMSLEEVINYASHR 441 + +E IN + + Sbjct: 421 SLGIEAAINMLTAQ 434 >gi|126739185|ref|ZP_01754879.1| prolyl-tRNA synthetase [Roseobacter sp. SK209-2-6] gi|126719802|gb|EBA16510.1| prolyl-tRNA synthetase [Roseobacter sp. SK209-2-6] Length = 451 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 236/445 (53%), Positives = 312/445 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A+I SH+ MLR GMI Q S GIYSWLPLG K L + I+ +E Sbjct: 1 MRLSRYFLPVLKETPSEAQIVSHRYMLRAGMIKQSSAGIYSWLPLGFKVLKKIETIVHDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PTLQSADLW ESGRYD YG+EMLR+ DR+ + M+YGPT+EE++TDIFR Sbjct: 61 QMRAGHIPMLMPTLQSADLWKESGRYDDYGEEMLRINDRHGRDMLYGPTNEELITDIFRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ V+ Sbjct: 121 HVSSYKDLPLTLYHIQWKFRDEIRPRFGVMRGREFYMKDGYNFDLTKEDALHAYNRHLVT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+ GPIGGD +HEF+VLA+TGE++VF D D+D Sbjct: 181 YLRSYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSAVTDLTFGDREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + ++E++T+ YA T + H+E LF +PE +R ARGIEVG IFYFGTKYS + A Sbjct: 241 SVEQCQGVLEEFTSKYARTDETHDEALFKEIPEERRRVARGIEVGQIFYFGTKYSEALGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T + ADG V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 TVQTADGGSVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDDE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACEKIYA LS VG + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACEKIYAALSAVGLEPLYDDRKERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R TG E+MS EE + + ++ + Sbjct: 421 RRTGESEEMSPEEAVKKVAEIYAKH 445 >gi|283856263|ref|YP_162195.2| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4] gi|292495061|sp|P75000|SYP_ZYMMO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|283775258|gb|AAV89084.2| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4] Length = 443 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 235/439 (53%), Positives = 314/439 (71%), Gaps = 2/439 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+++E P DA+I SHKLMLR GMI Q + GIY+WLPLG + L + IIREE Sbjct: 1 MRLSRYFLPVMKETPADAQIISHKLMLRAGMIRQTAAGIYAWLPLGLRVLRRIEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GA+E+ +PTLQ+ADLW ESGRYD+YG EMLR+ DR+++ ++YGPT+EE++T + R Sbjct: 61 QARAGALELLMPTLQTADLWRESGRYDAYGPEMLRIKDRHNRELLYGPTNEEMITALIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SYR+LP FY IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ +H+YN+MFV+ Sbjct: 121 NLQSYRDLPRIFYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDIDETAGRHNYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL F RLGL++IPM+A++GPIGGDLSHEFIVLA GE+ VF + + P DFD Sbjct: 181 YLNSFSRLGLRAIPMQADTGPIGGDLSHEFIVLAPNGESDVFYHSN-WEQPTRHIEADFD 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D +L SIV + YAAT + + L ++ +K +RGIEVGHIF+FGTKYS PM Sbjct: 240 DPKALQSIVNDHISDYAATDEKRDP-LREAQAGDKLRQSRGIEVGHIFFFGTKYSKPMGF 298 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G DGK +QMGSYGIG R++ A+IE+SHD GIIWP++VAP+ + LIN++ D+ Sbjct: 299 TLPGPDGKPIPIQMGSYGIGISRLLGAIIEASHDDNGIIWPEAVAPYHVGLINLRIDDEN 358 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 CR + +Y RL G D +DD E+ G++FA DL+G P QV++G K VE+K+ Sbjct: 359 CRAIADSLYQRLEAAGIDTLYDDRNERGGAKFATMDLIGLPWQVVIGPKGAEKGVVELKN 418 Query: 421 RLTGIREDMSLEEVINYAS 439 R G ++ +S+E N + Sbjct: 419 RANGEKQTISVENAFNLLT 437 >gi|332559243|ref|ZP_08413565.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides WS8N] gi|332276955|gb|EGJ22270.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides WS8N] Length = 445 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 237/443 (53%), Positives = 312/443 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+ MLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPSEAQIVSHRYMLRAGMIKQQAAGIYSWLPLGFKVLKRIEQIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PTLQ ADLW ESGRYD YG+EMLR+ DR+ + M+YGPT+EE++TDIFRS Sbjct: 61 QIRAGHIPLLMPTLQPADLWRESGRYDDYGEEMLRITDRHKRDMLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDL E + H+YN+ VS Sbjct: 121 HVSSYKDLPLTLYHIQWKFRDEIRPRFGVMRGREFLMKDGYNFDLDYESAIHAYNRHMVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA SGPIGGD +HEF+VLA TGE++VF D ++D Sbjct: 181 YLRTYERMGLQAIPMRAASGPIGGDNTHEFLVLASTGESEVFYDAAITDLKFGDRVVNYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D +IV++WTAPYA T + H+E +F +PE +R S+RGIEVG IFYFGTKYS PM A Sbjct: 241 DRAECEAIVKEWTAPYARTDETHDEAIFAQIPEERRRSSRGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T A G V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 TVVTAGGNRVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHAGIVNLKQGDSS 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +Y LS G + +DD E+ G++FA DL+G P ++ VG + ++ KVE+ + Sbjct: 361 TDLACEALYRDLSARGLEPLYDDRDERAGAKFATMDLIGLPWRITVGPRGIAAGKVELTN 420 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R TG E+MS ++ + ++ Sbjct: 421 RRTGESEEMSSGAAVDRLAQIYA 443 >gi|144899844|emb|CAM76708.1| prolyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1] Length = 429 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 227/439 (51%), Positives = 305/439 (69%), Gaps = 11/439 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLP L+E P +A+IASH+LMLR GMI Q + GIY+WLPLG K L + I+REE Sbjct: 1 MRLSRFFLPTLKETPSEAQIASHRLMLRAGMIRQSASGIYTWLPLGWKVLQKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+ GA E+ +PT+QSAD+W ESGRYD+YGKEMLR+ DR+D+ M++GPT+EE++T IFR Sbjct: 61 QDAAGAQELLMPTIQSADIWRESGRYDAYGKEMLRIVDRHDREMLFGPTNEELITQIFRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSYR LP Y IQ KFRDE+RPRFGVMR REFLMKD+YSFD+ +G+K SY MF + Sbjct: 121 NVKSYRELPKILYHIQWKFRDEVRPRFGVMRGREFLMKDSYSFDIDFDGAKRSYEAMFNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL +IPM A+SG IGG+L+HEF VLA+TGE+ VF + + Sbjct: 181 YLRTFKRMGLTAIPMVADSGAIGGNLTHEFHVLAETGESGVFYDVAYEELAAKDA----- 235 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 +E + YA T + H+ + P ++ ARGIEVGHIFYFGTKYS M A Sbjct: 236 ------VDLEALSKLYAVTDEKHDPNSPECPPADRLKVARGIEVGHIFYFGTKYSKAMGA 289 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG +V+MGSYGIG R+V A+IE+ HD +GI WP++VAPFK+ LIN+KA D Sbjct: 290 VVAGPDGNPVHVEMGSYGIGVSRLVGAIIEAYHDDRGIKWPEAVAPFKVGLINLKAGDGA 349 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C CE +Y LS+ G +V +DD ++ G +FA DL+G P Q++ G K V+ VE+K+ Sbjct: 350 CDRVCEDMYRALSEQGVEVLYDDRDDRAGVKFADMDLIGLPWQLVAGPKGVAAGLVELKN 409 Query: 421 RLTGIREDMSLEEVINYAS 439 R TG ++++S+E + + Sbjct: 410 RHTGEKQELSVEAALAQLT 428 >gi|86138530|ref|ZP_01057103.1| prolyl-tRNA synthetase [Roseobacter sp. MED193] gi|85824590|gb|EAQ44792.1| prolyl-tRNA synthetase [Roseobacter sp. MED193] Length = 451 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 228/446 (51%), Positives = 318/446 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+ MLR GMI Q S GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPSEAQIVSHRYMLRAGMIKQSSAGIYSWLPLGFKVLKKLEGIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G + M +PT+QSADLW ESGRYD YG+EMLR+ DR+ + M++ PT EE++TDIFR+ Sbjct: 61 QQRAGHMPMLMPTIQSADLWRESGRYDDYGQEMLRVEDRHGRDMLFTPTAEELITDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T YQIQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ V+ Sbjct: 121 HVSSYKDLPLTMYQIQWKFRDEIRPRFGVMRGREFYMKDGYNFDLTKEDALHAYNRHLVT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+ GPIGGD +HEF+VLA+TGE++VF D D+D Sbjct: 181 YLRTYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSAVTDLTFGDREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++ ++E++T+ YA T + H+E LF+ +PE +R ARGIEVG IFYFGTKYS ++A Sbjct: 241 NVEQCQGVLEEFTSKYARTDETHDEALFNQVPEERRRVARGIEVGQIFYFGTKYSDALNA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 TVQGPDGKPTPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDDE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC ++YA ++ +G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACNQLYAAMTALGLEPLYDDRKERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R TG E++S E+ + + +++++ Sbjct: 421 RRTGESEELSPEDAVKKVAAIYASHQ 446 >gi|294084092|ref|YP_003550850.1| prolyl-tRNA synthetase [Candidatus Puniceispirillum marinum IMCC1322] gi|292663665|gb|ADE38766.1| prolyl-tRNA synthetase [Candidatus Puniceispirillum marinum IMCC1322] Length = 437 Score = 399 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 231/441 (52%), Positives = 320/441 (72%), Gaps = 4/441 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P++A+IASH+LMLR GM+ Q S GIYSWLPLG++ LD + I+REE Sbjct: 1 MRLSQYFLPLLKETPKEAQIASHRLMLRAGMVQQSSAGIYSWLPLGKRVLDKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA+E+ +PT+Q A+LW ESGRYD YG EMLR+ DR+++ M+YGPT+EE +TDIFR+ Sbjct: 61 QNRAGALEILMPTIQPAELWQESGRYDDYGAEMLRIVDRHERNMLYGPTNEEQITDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H++SY+ LP Y IQ KFRDE+RPRFG+MR REFLMKDAYSFDL + ++ +YN+MFVS Sbjct: 121 HVRSYKALPLNMYHIQWKFRDEVRPRFGIMRGREFLMKDAYSFDLDGDKARAAYNRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+ F R+GL +IPM A++GPIGGD+SHEFI+LA+TGE+ V+ KD+M+ + ++ D Sbjct: 181 YLKTFARMGLTAIPMEADTGPIGGDMSHEFIILAETGESGVYFHKDWMNINLDAD---ID 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L V+++T+ YA D+H+ + ++ +S RGIE+GHIFYFGTKYS M A Sbjct: 238 YNADLQPFVDKYTSLYARADDMHDADNC-PVTADELMSLRGIEIGHIFYFGTKYSEAMGA 296 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G DGK V MGSYGIG R+V +IE+SHD KGIIWPDSVAPF ++++N+K D V Sbjct: 297 TVSGPDGKAVPVHMGSYGIGVSRLVGGIIEASHDDKGIIWPDSVAPFGVAIVNLKPGDAV 356 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C E++Y + G + DD ++ G++ A DL+G P Q++VG + + ++ VE+K Sbjct: 357 CDAEAERLYEQFDNAGLEPLLDDRNDRPGAKMASMDLIGIPWQIVVGPRGMENNMVEVKR 416 Query: 421 RLTGIREDMSLEEVINYASHR 441 R TG +MS + + +R Sbjct: 417 RKTGETAEMSPDSAVIKILNR 437 >gi|255262231|ref|ZP_05341573.1| prolyl-tRNA synthetase [Thalassiobium sp. R2A62] gi|255104566|gb|EET47240.1| prolyl-tRNA synthetase [Thalassiobium sp. R2A62] Length = 445 Score = 399 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 232/444 (52%), Positives = 318/444 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP DA+I SH+LMLR GMI Q + GIYSWLPLG K L N+ I+ EE Sbjct: 1 MRLSRYFLPVLKENPADAQIVSHRLMLRAGMIKQSAAGIYSWLPLGYKVLKNIENIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q + G + M +PT+QSADLW ESGRYD YG+EMLR+ DR+ + M+Y PT EE++T+IFRS Sbjct: 61 QAKAGHMPMLMPTMQSADLWRESGRYDDYGEEMLRVTDRHGRDMLYTPTAEELITEIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY+++P T YQIQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVSSYKDMPLTLYQIQWKFRDEIRPRFGVMRGREFYMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLADTGE++VF D + DFD Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLADTGESEVFYDSAVTDLSFGDRDIDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +I++++T YA T + H+E +F+ +PE +R +ARGIEVG IFYFGTKYS M A Sbjct: 241 SVDQCAAIMQEFTTKYARTDETHDEAVFNEVPEERRRTARGIEVGQIFYFGTKYSDAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF + ++N+K D+ Sbjct: 301 TVQGPDGKPVAVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHVGILNMKQGDED 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+ IY + +G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 TDAACQAIYDSFAALGLEPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R T E+M+ E+ + + +++ Sbjct: 421 RRTSESEEMTAEQAVEKVAAIYAS 444 >gi|85704335|ref|ZP_01035438.1| prolyl-tRNA synthetase [Roseovarius sp. 217] gi|85671655|gb|EAQ26513.1| prolyl-tRNA synthetase [Roseovarius sp. 217] Length = 451 Score = 399 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 243/451 (53%), Positives = 319/451 (70%), Gaps = 2/451 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A+IASH+LMLR GMI Q S GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKETPSEAQIASHRLMLRAGMIKQASAGIYSWLPLGFKILRKLENIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PTLQSADLW ESGRYD YG EMLR+ DR+D+ M+YGPT+EE++TDIFR+ Sbjct: 61 QVRAGHIPVLMPTLQSADLWRESGRYDDYGAEMLRIKDRHDRDMLYGPTNEELITDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT + + H+YN+ VS Sbjct: 121 HVGSYKDLPLTLYHIQWKFRDEVRPRFGVMRGREFLMKDGYNFDLTKDDALHAYNRHMVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLADTGE++VF D + D+ Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLADTGESEVFYDSAITDLSLGDRVVDYA 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 +IV +WT PYA T + H+ L+D++PE +R ++RGIEVG IFYFGTKYS PM A Sbjct: 241 SRAECAAIVTEWTTPYARTDETHDAALYDAIPEARRRASRGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK V MGS+GIG R+V A+IE++HD KGIIWP+ V PF ++N+K D Sbjct: 301 NVQGPDGKSVPVHMGSHGIGVSRLVGAIIEANHDDKGIIWPEGVTPFHAGIVNLKQGDAE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE IYA L+ +G + +DD E+ G +FA DL+G P ++ VG + + + VE Sbjct: 361 ADAACEAIYASLTALGMEPLYDDRDERAGGKFATMDLIGLPWRITVGPRGLKNGVVEFTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFSNN--RPVL 449 R TGI E++ EE + ++ + RP L Sbjct: 421 RRTGISEELPPEEAVAKLVQIYAGHVLRPSL 451 >gi|126463194|ref|YP_001044308.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029] gi|221640237|ref|YP_002526499.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides KD131] gi|166980147|sp|A3PMH0|SYP_RHOS1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782913|sp|B9KLX3|SYP_RHOSK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|126104858|gb|ABN77536.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029] gi|221161018|gb|ACM01998.1| Prolyl-tRNA synthetase [Rhodobacter sphaeroides KD131] Length = 445 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 239/443 (53%), Positives = 313/443 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+ MLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPSEAQIVSHRYMLRAGMIKQQAAGIYSWLPLGFKVLKRIEQIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PTLQ ADLW ESGRYD YG+EMLR+ DR+ + M+YGPT+EE++TDIFRS Sbjct: 61 QIRAGHIPLLMPTLQPADLWRESGRYDDYGEEMLRITDRHKRDMLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDL E + H+YN+ VS Sbjct: 121 HVSSYKDLPLTLYHIQWKFRDEIRPRFGVMRGREFLMKDGYNFDLDYESAIHAYNRHMVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA SGPIGGD +HEF+VLA TGE++VF D ++D Sbjct: 181 YLRTYERMGLQAIPMRAASGPIGGDNTHEFLVLASTGESEVFYDAAITDLKFGDRVVNYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D +IV++WTAPYA T + H+E +F +PE +R S+RGIEVG IFYFGTKYS PM A Sbjct: 241 DRAECEAIVKEWTAPYARTDETHDEAVFGQIPEERRRSSRGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T ADG V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 TVVTADGSRVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHAGIVNLKQGDSS 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +Y LS G + +DD E+ G++FA DL+G P ++ VG + +S KVE+ + Sbjct: 361 TDLACEALYRDLSARGLEPLYDDRDERAGAKFATMDLIGLPWRITVGPRGISAGKVELTN 420 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R TG E+MS ++ + ++ Sbjct: 421 RRTGESEEMSSGAAVDRLAQIYA 443 >gi|40063567|gb|AAR38356.1| prolyl-tRNA synthetase [uncultured marine bacterium 582] Length = 445 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 224/438 (51%), Positives = 308/438 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+P+L+ENP DA+I SH+LMLR GMI Q S GIYSWLP+G K L + I+ EE Sbjct: 1 MRLSRYFMPVLKENPVDAQIVSHRLMLRAGMIKQSSAGIYSWLPMGFKVLKKIEDIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G + M +PT+QSADLW ESGRYD++G EMLR+ DR+D+ M++ PT EE++TDIFR+ Sbjct: 61 QQRAGHMPMLMPTIQSADLWRESGRYDAFGDEMLRIKDRHDRDMLFTPTAEELITDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T YQIQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVGSYKDLPLTLYQIQWKFRDEIRPRFGVMRGREFYMKDGYNFDLTKEAALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SG +GGD +HEF+VLA+TGE++VF D D+D Sbjct: 181 YLRTYERMGLQAIPMRADSGAMGGDNTHEFLVLAETGESEVFYDSAVTDLTFGDRAIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + ++E++T YA T + H+E LF+ +PE +R ARGIEVG IFYFGTKYS ++A Sbjct: 241 SVAQCQGVLEEFTTKYARTDETHDEALFNQIPEERRRVARGIEVGQIFYFGTKYSEALNA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D+ Sbjct: 301 TVDDGQGGKTPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDEA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+ +Y+ L+ G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACDGLYSALTNAGLEPLYDDRKERAGGKFATMDLIGLPWRITVGPRGLKNGVVEVTS 420 Query: 421 RLTGIREDMSLEEVINYA 438 R +G+ E+M+ E + Sbjct: 421 RRSGVSEEMTPEAAVAKV 438 >gi|163745976|ref|ZP_02153335.1| prolyl-tRNA synthetase [Oceanibulbus indolifex HEL-45] gi|161380721|gb|EDQ05131.1| prolyl-tRNA synthetase [Oceanibulbus indolifex HEL-45] Length = 446 Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats. Identities = 234/443 (52%), Positives = 314/443 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+LMLR GMI Q S GIYSWLPLG K L V I+ +E Sbjct: 1 MRLSQYFLPVLKENPAEAQIVSHRLMLRAGMIKQSSAGIYSWLPLGYKVLRKVEEIVHQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PTLQSADLW ESGRYD+YG EMLR+ DR D+ M+YGPT+EE++TDIFRS Sbjct: 61 QQRVGHIPMLMPTLQSADLWKESGRYDAYGPEMLRIRDRQDRDMLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVGSYKDLPLTLYHIQWKFRDEIRPRFGVMRGREFLMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLA+TGE++VF + D + D Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSEITDLTFGNREIDPS 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D + ++++++T+ YA T + H+ +LF +PE ++ +ARGIEVG IFYFGTKYS M+A Sbjct: 241 DHDACRAVLDEFTSRYARTDETHDPELFAKVPEERQRTARGIEVGQIFYFGTKYSDAMNA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 KVQGPDGKQVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHAGIVNLKQGDDE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +Y L +G D +DD G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACEALYKSLKALGLDPLYDDRKGGAGMKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R TG E++ E+ + + ++ Sbjct: 421 RRTGESEELPPEQAVEKLAKIYA 443 >gi|294677986|ref|YP_003578601.1| prolyl-tRNA synthetase [Rhodobacter capsulatus SB 1003] gi|294476806|gb|ADE86194.1| prolyl-tRNA synthetase [Rhodobacter capsulatus SB 1003] Length = 446 Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats. Identities = 231/446 (51%), Positives = 311/446 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+LMLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPAEAQIVSHRLMLRAGMIKQQAAGIYSWLPLGFKVLKRIEQIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PTLQ ADLW ESGRYD YG+EMLR+ DR+++ M+YGPT+EE++TDIFR+ Sbjct: 61 QIRAGHIPLLMPTLQPADLWRESGRYDDYGQEMLRIKDRHEREMLYGPTNEEMITDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVSSYKDLPLTLYHIQWKFRDEVRPRFGVMRGREFYMKDGYNFDLTREDALHAYNRHMVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL +IPMRA SGPIGGD +HEF+VLA TGE++VF D + D+D Sbjct: 181 YLRTYERMGLTAIPMRAASGPIGGDNTHEFLVLAQTGESEVFYDAQVPDLKLGDRAVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D + +I +++T YA T + H+E +F+ +PE +R RGIEVG IFYFGTKYS M A Sbjct: 241 DRDQVAAICQEFTTLYARTDETHDEAVFNQIPEARRCVGRGIEVGQIFYFGTKYSEAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T DG V+MGS+GIG R++ A+IE++HD +GIIWP+ V PF + ++N+K D Sbjct: 301 TVVTPDGTRVPVEMGSHGIGVSRLLGALIEANHDERGIIWPEGVTPFHVGIVNLKQGDGA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC IY L G D +DD E+ G++FA DL+G P ++ VG + ++ VE+ Sbjct: 361 TDAACAGIYKALVAKGLDPLYDDRDERAGAKFATMDLIGLPWRITVGPRGLAGGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R TG E+MS E ++ + ++ +R Sbjct: 421 RRTGESEEMSAEAAVDRIAQIYAAHR 446 >gi|77464352|ref|YP_353856.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1] gi|114152244|sp|Q3IZS9|SYP_RHOS4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|77388770|gb|ABA79955.1| Prolyl-tRNA synthetase, class IIa [Rhodobacter sphaeroides 2.4.1] Length = 445 Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats. Identities = 238/443 (53%), Positives = 312/443 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+ MLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPSEAQIVSHRYMLRAGMIKQQAAGIYSWLPLGFKVLKRIEQIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PTLQ ADLW ESGRYD YG+EMLR+ DR+ + M+YGPT+EE++TDIFRS Sbjct: 61 QIRAGHIPLLMPTLQPADLWRESGRYDDYGEEMLRITDRHKRDMLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDL E + H+YN+ VS Sbjct: 121 HVSSYKDLPLTLYHIQWKFRDEIRPRFGVMRGREFLMKDGYNFDLDYESAIHAYNRHMVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA SGPIGGD +HEF+VLA TGE++VF D ++D Sbjct: 181 YLRTYERMGLQAIPMRAASGPIGGDNTHEFLVLASTGESEVFYDAAITDLKFGDRVVNYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D +IV++WTAPYA T + H+E +F +PE +R S+RGIEVG IFYFGTKYS PM A Sbjct: 241 DRAECEAIVKEWTAPYARTDETHDEAVFGQIPEERRRSSRGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 ADG V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 NVVTADGSRVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHAGIVNLKQGDSS 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +Y LS G + +DD E+ G++FA DL+G P ++ VG + +S KVE+ + Sbjct: 361 TDLACEALYRDLSARGLEPLYDDRDERAGAKFATMDLIGLPWRITVGPRGISAGKVELTN 420 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R TG E+MS ++ + ++ Sbjct: 421 RRTGESEEMSSGAAVDRLAQIYA 443 >gi|119384044|ref|YP_915100.1| prolyl-tRNA synthetase [Paracoccus denitrificans PD1222] gi|152112938|sp|A1B1L0|SYP_PARDP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|119373811|gb|ABL69404.1| prolyl-tRNA synthetase [Paracoccus denitrificans PD1222] Length = 450 Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats. Identities = 233/440 (52%), Positives = 316/440 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+P+L+E+P++A+I SH+LMLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFMPVLKEDPKEAQIVSHRLMLRAGMIKQQAAGIYSWLPLGYKVLRRIEQIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PTLQSADLW ESGRYD YG+EMLR+ DR+ + ++YGPT+EE++TDIFRS Sbjct: 61 QARAGHIAMLMPTLQSADLWRESGRYDDYGEEMLRIKDRHKRDLLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y +Q KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVNSYKDLPLTLYHVQWKFRDEIRPRFGVMRGREFLMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+ GPIGGD +HEF+VLA+TGE++VF + D D+D Sbjct: 181 YLRTYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSEITDLKFGDRRIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ +++E++T+ YA T + H+ LF+ +P+ +R ARGIEVG IFYFGTKYS PM A Sbjct: 241 DVAQCRAVLEEFTSRYARTDETHDAALFEQIPKERRRVARGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G DG V MGS+GIG R++ A+IE+SHD +GIIWP+ V PF + ++N+K D Sbjct: 301 TVVGPDGSRVPVHMGSHGIGVSRLLGAIIEASHDDRGIIWPEGVTPFHVGIVNLKQGDAS 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +YA L G D +DD E+ G++FA DL+G P ++ VG + ++ +KVE+ Sbjct: 361 TDGACEALYAELKAQGLDALYDDRDERAGAKFATMDLVGLPWRITVGPRGLAANKVELTS 420 Query: 421 RLTGIREDMSLEEVINYASH 440 R TG +MS +E + Sbjct: 421 RRTGESVEMSPQEAVVRLRE 440 >gi|149201764|ref|ZP_01878738.1| prolyl-tRNA synthetase [Roseovarius sp. TM1035] gi|149144812|gb|EDM32841.1| prolyl-tRNA synthetase [Roseovarius sp. TM1035] Length = 451 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 240/451 (53%), Positives = 320/451 (70%), Gaps = 2/451 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A+IASH+LMLR GMI Q S GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKETPAEAQIASHRLMLRAGMIKQASAGIYSWLPLGFKILRKLENIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PTLQSADLW ESGRYD YG EMLR+ DR+D+ M+YGPT+EE++TDIFR+ Sbjct: 61 QVRAGHIPVLMPTLQSADLWRESGRYDDYGAEMLRIKDRHDRDMLYGPTNEELITDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVGSYKDLPLTLYHIQWKFRDEVRPRFGVMRGREFLMKDGYNFDLTKEDALHAYNRHMVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLADTGE++VF D + D+ Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLADTGESEVFYDSAITDLRLGGRVVDYA 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 +IV +WT PYA T + H+ L++++PE +R ++RGIEVG IFYFGTKYS PM A Sbjct: 241 SRAECEAIVTEWTTPYARTDETHDAALYEAIPEARRRASRGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK V MGS+GIG R++ A+IE++HD KGIIWP+ V PF ++N+K D Sbjct: 301 NVQGPDGKSVPVHMGSHGIGVSRLIGAIIEANHDDKGIIWPEGVTPFHAGIVNLKQGDAE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +YA L +G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACEALYASLVALGMEPLYDDRDERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFSNN--RPVL 449 R TGI E++ E+ + + ++ + RP L Sbjct: 421 RRTGISEELPPEQAVEKLAQIYAGHVLRPSL 451 >gi|254474756|ref|ZP_05088142.1| prolyl-tRNA synthetase [Ruegeria sp. R11] gi|214028999|gb|EEB69834.1| prolyl-tRNA synthetase [Ruegeria sp. R11] Length = 450 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 228/446 (51%), Positives = 312/446 (69%), Gaps = 1/446 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+ MLR GMI Q + GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPSEAQIVSHRYMLRAGMIKQSAAGIYSWLPLGFKVLKKIEGIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M + T+Q ADLW ESGRYD YG+EMLR+ DR+D+ M++GPT+EE++TDIFR+ Sbjct: 61 QMRAGHIPMLMSTMQPADLWRESGRYDDYGQEMLRIKDRHDRDMLFGPTNEEMITDIFRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T YQ+Q KFRDE+RPRFGVMR REF MKD Y+FDL+ E + H+YN+ VS Sbjct: 121 HVSSYKDLPLTMYQVQWKFRDEIRPRFGVMRGREFYMKDGYNFDLSKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+ GPIGGD +HEF+VLA+TGE++VF D D+D Sbjct: 181 YLRTYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSAVTDLTFGDREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + ++E++T+ YA T + H+E LF+ +PE++R ARGIEVG IFYFGTKYS M A Sbjct: 241 SVEQCQGVLEEFTSKYARTDETHDEALFNEIPEDRRRVARGIEVGQIFYFGTKYSEAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + DG+ V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D+ Sbjct: 301 KVQTPDGEV-PVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDEA 359 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +Y L G D +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 360 ADGACEDLYKALVAAGLDPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 419 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R TG E+++ E + ++N+R Sbjct: 420 RRTGESEELAPEAAVAKIIEIYANHR 445 >gi|315122709|ref|YP_004063198.1| prolyl-tRNA synthetase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496111|gb|ADR52710.1| prolyl-tRNA synthetase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 453 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 356/442 (80%), Positives = 398/442 (90%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+RSKYFLP +QENP+DAEI SHK+MLRTGMI QHSKG+YSWLPLG KAL VNAIIREE Sbjct: 1 MKRSKYFLPAMQENPKDAEIISHKMMLRTGMISQHSKGMYSWLPLGNKALSKVNAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GA+EMS PTLQSADLW+ESGRY+SYGKEMLR+ DRNDK+M+YGPT+EE+MTDIFRS Sbjct: 61 QDRIGALEMSNPTLQSADLWIESGRYESYGKEMLRIVDRNDKSMLYGPTNEEMMTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+KSYR+LP YQ+QLKFRDELRPRFG MRSREFLMKDAYSFDLT E S HSYNKMFVS Sbjct: 121 HVKSYRDLPLILYQMQLKFRDELRPRFGTMRSREFLMKDAYSFDLTFEDSVHSYNKMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLRIFHRLGLKSIPMRAESGPIGG LSHEFIVL++TGETQ+FCSKDFM+FPIPSENTDFD Sbjct: 181 YLRIFHRLGLKSIPMRAESGPIGGSLSHEFIVLSNTGETQLFCSKDFMNFPIPSENTDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 DI+SL IV QWT PYAATSDVHNEKLF SL E R+ ARGIEVGHIF+FGTKYS PMSA Sbjct: 241 DIVSLKDIVRQWTTPYAATSDVHNEKLFHSLSEEDRIVARGIEVGHIFHFGTKYSHPMSA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 TF+GADGK HYVQMGSYGIG MRVVAA+IESSHD +GIIWPDSV+PF ISLIN+K HDQ Sbjct: 301 TFQGADGKKHYVQMGSYGIGPMRVVAAIIESSHDAQGIIWPDSVSPFHISLINLKIHDQA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C A +KIY +LS+ GCDVF DD+ EQ GS+FA+ADLLGFPLQ+I+GSKF+SDSKVEIK+ Sbjct: 361 CCSASDKIYTQLSQAGCDVFLDDVDEQAGSKFALADLLGFPLQIIIGSKFISDSKVEIKN 420 Query: 421 RLTGIREDMSLEEVINYASHRF 442 R TG +E MSLEEV+NYAS+RF Sbjct: 421 RSTGTKEYMSLEEVVNYASNRF 442 >gi|89053551|ref|YP_509002.1| prolyl-tRNA synthetase [Jannaschia sp. CCS1] gi|114152201|sp|Q28TI5|SYP_JANSC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|88863100|gb|ABD53977.1| prolyl-tRNA synthetase [Jannaschia sp. CCS1] Length = 452 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 223/448 (49%), Positives = 315/448 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A+I SH+LMLR GMI Q S GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKETPAEAQIVSHRLMLRAGMIKQASAGIYSWLPLGYKVLKRIERIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PTLQSADLW +SGR+D+YG EMLRL DR+D+ M+YGPT+EE++TD+ + Sbjct: 61 QIRAGHIPMLMPTLQSADLWQKSGRFDAYGPEMLRLKDRHDRDMLYGPTNEEMITDMVGT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 FVTSYKSLPLTLYHIQWKFRDEVRPRFGVMRGREFLMKDGYNFDLTKEAALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLADTGE++VF + D D+D Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDYTHEFLVLADTGESEVFYDAEITDLKFGDREIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ +++++++T+ YA T + H+E F ++P +++ SARGIEVG IFYFGT+YS + A Sbjct: 241 DVAQCDAVLQEFTSRYARTDETHDEAEFAAIPGDRQRSARGIEVGQIFYFGTEYSEKLGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +G+ + MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 HVQNDEGERVPLHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDAE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE + L G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACEALETALENAGLEPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFSNNRPV 448 R TG E+++ + + + ++ ++PV Sbjct: 421 RRTGESEELTPDAAVARVAEVYAAHKPV 448 >gi|148555262|ref|YP_001262844.1| prolyl-tRNA synthetase [Sphingomonas wittichii RW1] gi|166980160|sp|A5V8U0|SYP_SPHWW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|148500452|gb|ABQ68706.1| prolyl-tRNA synthetase [Sphingomonas wittichii RW1] Length = 437 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 237/439 (53%), Positives = 319/439 (72%), Gaps = 3/439 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FLP+++E+P DA+I SHKLMLR GMI Q + GIY+WLPLG + L + I+REE Sbjct: 1 MRLSRHFLPVMKESPADAQIVSHKLMLRAGMIRQTAAGIYAWLPLGHRVLRKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GAIE+ +PT+QSADLW ESGRYD+YG EMLR+ DR+D+ M++GPT+EE++T IFR Sbjct: 61 QDRAGAIELLMPTMQSADLWRESGRYDAYGPEMLRIKDRHDREMLFGPTNEEMITAIFRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + +SYR+LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFDL EG++HSYN+MFV+ Sbjct: 121 NARSYRDLPRILYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDLDIEGARHSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GL +IPM+A++GPIGGDLSHEFIVLA TGE++VF + + + D D Sbjct: 181 YLRTFRRMGLSAIPMQADTGPIGGDLSHEFIVLAPTGESEVFYHTN--WEVERALDVDVD 238 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ +L V+ TA YAAT + + + + +RGIEVGHIFYFGTKYS M Sbjct: 239 DVAALQGFVDGLTADYAATDEKRDPAREAAAGD-SLKQSRGIEVGHIFYFGTKYSAAMGM 297 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DG+ QMGSYGIG R++ A+IE+SHD GI+WPD+VAP+ + LIN++A D Sbjct: 298 TVQGPDGQPVTPQMGSYGIGVSRLMGAIIEASHDDAGIVWPDAVAPYTVGLINMRADDAR 357 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C A + +YA+L G + +DD E+ G++FA DL+G P Q++VG K + VE+K Sbjct: 358 CAAAADDLYAKLEAAGIETLYDDRDERGGAKFATMDLIGLPWQIVVGPKGLDKGVVELKR 417 Query: 421 RLTGIREDMSLEEVINYAS 439 R TG + ++S+E+ I + Sbjct: 418 RATGEKVELSVEDAIARIA 436 >gi|302383072|ref|YP_003818895.1| prolyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264] gi|302193700|gb|ADL01272.1| prolyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264] Length = 437 Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats. Identities = 239/439 (54%), Positives = 322/439 (73%), Gaps = 4/439 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP L+E P DA+I SH+LMLR GMI Q + GIY+WLPLG + L+ + I+REE Sbjct: 1 MRLSRYFLPTLKEAPSDAQIVSHQLMLRAGMIKQEAAGIYAWLPLGLRVLNRIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GA+E+ +PTLQ ADLW ESGRYD+YG EMLR+ DR+++ ++YGPT+EE++TDIFR Sbjct: 61 QERAGAVELLMPTLQLADLWRESGRYDAYGPEMLRITDRHERELLYGPTNEEMITDIFRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP + IQ KFRDE RPRFGVMR REFLMKDAYSFD+ ++ +YN+MFV+ Sbjct: 121 FVKSYKALPLNLFHIQWKFRDERRPRFGVMRGREFLMKDAYSFDIDEASARRAYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL F R+GLK++PMRA++GPIGGDLSHEFIVLADTGE+QVFC K ++ P P + D++ Sbjct: 181 YLNTFARMGLKAVPMRADTGPIGGDLSHEFIVLADTGESQVFCDKQLVEMPAPGADVDWN 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLP-ENKRVSARGIEVGHIFYFGTKYSLPMS 299 D+ ++ V+ T+ YAAT ++H+ F+S + R++ARGIEVGHIFYFGTKYS PM Sbjct: 241 DLQAI---VDGRTSLYAATEEMHDAAQFESQTADGDRLTARGIEVGHIFYFGTKYSAPMK 297 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A G DG+D V MGSYG+G R++ A+IE+SHD GIIWPD+VAPF + +IN++A+D Sbjct: 298 AKVAGPDGQDTEVHMGSYGVGVSRLLGAIIEASHDDAGIIWPDAVAPFDVVVINLRANDP 357 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +ACE L G V +DD E+ G +FA ADL+G P Q+ +G K V++ VE+K Sbjct: 358 GVCEACEAAVEALEAAGKSVLYDDTDERPGGKFATADLIGIPWQLTIGPKGVAEGVVELK 417 Query: 420 HRLTGIREDMSLEEVINYA 438 R +G + + L++ + Sbjct: 418 RRASGEKSTLPLDQAMERI 436 >gi|304319826|ref|YP_003853469.1| prolyl-tRNA synthetase [Parvularcula bermudensis HTCC2503] gi|303298729|gb|ADM08328.1| prolyl-tRNA synthetase [Parvularcula bermudensis HTCC2503] Length = 446 Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats. Identities = 227/442 (51%), Positives = 310/442 (70%), Gaps = 3/442 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ +LP+L+E P +A IASH+LMLR+GM+ Q + GIY+WLPLG K L V AI+REE Sbjct: 1 MKLSRTYLPLLKETPAEAVIASHRLMLRSGMVRQQAAGIYAWLPLGLKVLKKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G E+ +PT+Q A LW +SGRYD+YG EMLRL DR+ + M+YGPT+EE++T++ R+ Sbjct: 61 QERAGVAELLMPTIQPASLWHQSGRYDAYGPEMLRLKDRHGRDMLYGPTNEEMITELVRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T + IQ KFRDE+RPRFGVMR REFLMKDAYSFDL+PE ++ SY + F + Sbjct: 121 GIKSYKELPKTLFHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDLSPEAARRSYLRFFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLG+K+IP+RA++GPIGG LSHEF+VLA+TGE++VF +K ++ P T D Sbjct: 181 YLRTFARLGVKAIPVRADTGPIGGKLSHEFVVLAETGESEVFTAKGLVEKTPPP--TSLD 238 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + +WT YAAT ++H+E F +LPE++R+ ARGIEVGHIFYFGTKYS PM Sbjct: 239 YDGDLEPLFAEWTGTYAATDEMHDEAAFLALPEDQRLQARGIEVGHIFYFGTKYSEPMQF 298 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DG+ GSYGIG R+V A+IE+ HD +G WP VAP+++ L+N+K Sbjct: 299 AVEGPDGRAFVEM-GSYGIGVSRLVGALIEAHHDDQGCRWPVPVAPYEVGLVNLKTGHDG 357 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC ++Y G DV DD G++ G +FA DL+G PL V +G + V + E+K Sbjct: 358 TDGACHRLYDEAVAAGLDVLLDDSGDRAGEKFARMDLIGLPLIVTIGPRGVEAGQAEVKD 417 Query: 421 RLTGIREDMSLEEVINYASHRF 442 R TG ++++ L +++Y Sbjct: 418 RRTGAKQEVPLTGLVDYLRSAI 439 >gi|146276453|ref|YP_001166612.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025] gi|166980148|sp|A4WPJ3|SYP_RHOS5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|145554694|gb|ABP69307.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025] Length = 445 Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats. Identities = 236/443 (53%), Positives = 315/443 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+ MLR GMI Q + GIYSWLPLG KAL V I+ EE Sbjct: 1 MRLSRYFLPVLKENPSEAQIVSHRFMLRAGMIKQQAAGIYSWLPLGFKALKRVEQIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PTLQ ADLW ESGRYD YG+EMLR+ DR+ + M+YGPT+EE++TDIFRS Sbjct: 61 QIRAGHIPLLMPTLQPADLWRESGRYDDYGEEMLRITDRHKRDMLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y +Q KFRDE+RPRFGVMR REFLMKD Y+FDL + + H+YN+ VS Sbjct: 121 HVNSYKDLPLTLYHVQWKFRDEIRPRFGVMRGREFLMKDGYNFDLDFDSAIHAYNRHMVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA SGPIGGD +HEF+VLA TGE++VF D D+D Sbjct: 181 YLRTYERMGLQAIPMRAASGPIGGDNTHEFLVLASTGESEVFYDAAITDLKFGDRVVDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 +IV++WT PYA T + H+E +F+++PE +R ++RGIEVG IFYFGTKYS PM A Sbjct: 241 SREECEAIVKEWTTPYARTDETHDEAIFNAIPEERRRTSRGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T ADG V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF + ++N+K D Sbjct: 301 TVVTADGARVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHVGIVNLKQGDSS 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +Y LS G + +DD E+ G++FA DL+G P ++ VG + ++ KVE+ + Sbjct: 361 TDLACEALYRDLSAKGLEPLYDDRDERAGAKFATMDLIGLPWRITVGPRGIAAGKVELTN 420 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R TG E+MS ++ + ++ Sbjct: 421 RRTGESEEMSSGAAVDRLAQIYA 443 >gi|254463517|ref|ZP_05076933.1| prolyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083] gi|206680106|gb|EDZ44593.1| prolyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083] Length = 445 Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats. Identities = 231/439 (52%), Positives = 309/439 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP DA+I SH+LMLR GMI Q S GIYSWLP+G K L + I+ EE Sbjct: 1 MRLSRYFLPILKENPADAQIVSHRLMLRAGMIKQSSAGIYSWLPMGFKVLRKIENIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PTLQSADLW +SGRYD+YG EMLR+ DR+D+ M+YGPT+EE++TD+ + Sbjct: 61 QQRAGHIPMLMPTLQSADLWRKSGRYDAYGPEMLRIKDRHDREMLYGPTNEELITDMVAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP T Y +Q KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ V+ Sbjct: 121 FVGSYKSLPLTLYHVQWKFRDEVRPRFGVMRGREFLMKDGYNFDLTKEDALHAYNRHLVT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLADTGE++VF + D DFD Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDYTHEFLVLADTGESEVFYDSEITDLSFGDRTIDFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D + S++E++T+ YA T + H E F+ LPE +R ARGIEVG IFYFGT+YS M A Sbjct: 241 DKAACQSVMEEFTSRYARTDETHEEAAFNELPEERRRVARGIEVGQIFYFGTEYSEKMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + DG+ + MGS+GIG R++ A+IE+SHD GIIWP+ V PF ++N+K D Sbjct: 301 MVQNEDGQRVPLHMGSHGIGVSRLLGAIIEASHDDNGIIWPEGVTPFHCGIVNLKQGDDE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+ +Y L+ +G D +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACDALYDSLTALGLDPLYDDRKERAGGKFATMDLIGLPWRITVGPRGLKNGVVEVTS 420 Query: 421 RLTGIREDMSLEEVINYAS 439 R TG E+M+ E I + Sbjct: 421 RRTGESEEMTPELAIAKIA 439 >gi|126735142|ref|ZP_01750888.1| prolyl-tRNA synthetase [Roseobacter sp. CCS2] gi|126715697|gb|EBA12562.1| prolyl-tRNA synthetase [Roseobacter sp. CCS2] Length = 446 Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats. Identities = 226/440 (51%), Positives = 312/440 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E PR+A+I SH+ ML+ GMI Q S GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKETPREAQIVSHRYMLQAGMIKQASAGIYSWLPLGFKVLRKIENIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PT+QSADLW ESGRYD+YG+EMLR+ DR + M++ PT EE++TDIFR+ Sbjct: 61 QARAGHIAIQMPTIQSADLWRESGRYDAYGEEMLRIKDRGGRDMLFTPTAEELVTDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T YQIQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVNSYKDLPLTLYQIQWKFRDEVRPRFGVMRGREFYMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLA+TGE++VF + D D+D Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSEITDLKFGDRQIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D + +++E++T+ YA T + H+E LFD++PE ++ +ARGIEVG IFYFGTKYS M A Sbjct: 241 DKAACQAVLEEFTSRYARTDETHDEALFDAIPEERKRTARGIEVGQIFYFGTKYSESMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+++ D Sbjct: 301 LVDDGQGGKVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGILNMRSGDAA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +YA L+ +G + +DD E+ G++F D++G P ++ VG + + + VE+ Sbjct: 361 ADAACEALYASLTALGLEPLYDDRDERAGAKFGTMDMIGLPWRITVGPRGLKNGVVEVTC 420 Query: 421 RLTGIREDMSLEEVINYASH 440 R TG E+M E+ + + Sbjct: 421 RRTGESEEMPPEDAVAKIAK 440 >gi|121602198|ref|YP_989086.1| prolyl-tRNA synthetase [Bartonella bacilliformis KC583] gi|152112216|sp|A1USY3|SYP_BARBK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|120614375|gb|ABM44976.1| prolyl-tRNA synthetase [Bartonella bacilliformis KC583] Length = 441 Score = 394 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 258/439 (58%), Positives = 328/439 (74%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH LMLR G+I Q + GIYSWLPLG+K LD V IIREE Sbjct: 1 MRLSQYFLPILKENPKEAEIISHCLMLRAGIIRQQTSGIYSWLPLGKKVLDKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GA+E+S+PT+QSADLW ESGRYD YG EMLR+ DR ++ ++YGPT+EE++TDIFRS Sbjct: 61 QERAGALEISMPTIQSADLWRESGRYDDYGLEMLRIKDRQERDLLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP YQIQ KFRDE+RPRFGVMRSREFLMKD YSFDL E +K SYN+MF++ Sbjct: 121 YVRSYKDLPLNLYQIQWKFRDEIRPRFGVMRSREFLMKDGYSFDLDYESAKTSYNRMFIA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK IPMRA++GPIGG+LSHEFI+LA TGE+ VFC K F++ P + DF Sbjct: 181 YLRTFSRIGLKVIPMRADTGPIGGELSHEFIILAKTGESAVFCDKRFLEMTAPPVSVDFT 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D + L IV+QWTA YA T ++HN + + + ++ ++SARGIEVGHIFYFGTKYS PM A Sbjct: 241 DNVVLTDIVKQWTALYATTEEMHNAEEWAQICKSNQLSARGIEVGHIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK++ V MGSYGIG R+VAA IE+SHD GIIWP + PF +IN K+ + Sbjct: 301 KVMGRDGKEYPVFMGSYGIGPSRLVAAAIEASHDENGIIWPKPITPFDFGIINTKSDNAK 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C CE +Y L G D DD E+ G++FA DL+G P Q+IVG K + +VEIK Sbjct: 361 CYGMCETLYQGLVNAGFDPLLDDRNERPGAKFATMDLIGLPTQIIVGPKSAAQDEVEIKD 420 Query: 421 RLTGIREDMSLEEVINYAS 439 R TG +E +++E +N S Sbjct: 421 RKTGTKEVLTVEAALNRLS 439 >gi|114769540|ref|ZP_01447166.1| prolyl-tRNA synthetase [alpha proteobacterium HTCC2255] gi|114550457|gb|EAU53338.1| prolyl-tRNA synthetase [alpha proteobacterium HTCC2255] Length = 446 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 231/444 (52%), Positives = 318/444 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKYFLPIL+ENP DA+IASH+LMLR GMI Q GIYSWLP+G K L + I+ +E Sbjct: 1 MRLSKYFLPILKENPSDAQIASHRLMLRAGMIRQAQSGIYSWLPMGYKVLRKLENIVHDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G M +PT+QSADLW ESGRYD YGKEMLR+ DR+ + M++GPT+EE++TDIFR+ Sbjct: 61 QIRAGHNPMLMPTIQSADLWRESGRYDDYGKEMLRITDRHGRDMLFGPTNEELITDIFRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDL E + HSYN+ VS Sbjct: 121 SVKSYKDLPMTLYHIQWKFRDEVRPRFGVMRGREFLMKDGYNFDLNKEAAMHSYNRHMVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+G+K+IPMRA+SGPIGG+ +HEF+VLADTGE++VF ++ +D + + D++ Sbjct: 181 YLRTYERMGMKAIPMRADSGPIGGEDTHEFLVLADTGESEVFFDRNILDLSLGDKEIDYN 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + SI ++WT PYA T + HN +LF +P+ +++++RGIEVG IFYFGTKYS M+A Sbjct: 241 NWDECASIFKEWTTPYARTDETHNPELFAKIPDERQMTSRGIEVGQIFYFGTKYSESMNA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + + V MGS+GIG R+V A+IE+SHD GIIWP++V+PF + ++N+K D Sbjct: 301 KVSTPNDGEIPVHMGSHGIGVSRMVGAIIEASHDENGIIWPEAVSPFGVGIVNLKQGDDQ 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE +Y S +G D +DD E+ G++FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADLACENLYKSASLLGIDPLYDDRSERAGAKFASMDLIGLPWRITVGPRGLKNGVVELTC 420 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R TG+ E++ E + + +S Sbjct: 421 RRTGVSEELPPELAMEKLAKVYSK 444 >gi|83949530|ref|ZP_00958263.1| prolyl-tRNA synthetase [Roseovarius nubinhibens ISM] gi|83837429|gb|EAP76725.1| prolyl-tRNA synthetase [Roseovarius nubinhibens ISM] Length = 452 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 242/443 (54%), Positives = 321/443 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A+I SH+LMLR GMI Q S GIYSWLPLG K L N+ I+ EE Sbjct: 1 MRLSRYFLPVLKETPSEAQIVSHRLMLRAGMIKQSSAGIYSWLPLGYKVLRNIETIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I M +PTLQSADLW ESGRYD+YG EMLR+ DR D+ M++GPT+EE++TDIFRS Sbjct: 61 QQRVGHIPMLMPTLQSADLWRESGRYDAYGPEMLRIRDRQDRDMLFGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVSSYKDLPLTLYHIQWKFRDEIRPRFGVMRGREFLMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLA+TGE++VF + D D D Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLAETGESEVFYDSEITDLTFGEREIDHD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +++E++T+ YA T + H+E LF+ +PE +R ARGIEVG IFYFGTKYS PM A Sbjct: 241 SHEACQAVLEEFTSRYARTDETHDEALFNQIPEERRRVARGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T +G DGK V MGS+GIG R++ A+IE+SHD KGIIWP++VAPF + ++N+K D Sbjct: 301 TVQGPDGKPVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEAVAPFHVGIVNLKQGDDE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+ +YA+++ +G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACDALYAQVAALGLEPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R TG E++S E I FS Sbjct: 421 RRTGESEELSPEAAIAKLKEHFS 443 >gi|163733470|ref|ZP_02140913.1| prolyl-tRNA synthetase [Roseobacter litoralis Och 149] gi|161393258|gb|EDQ17584.1| prolyl-tRNA synthetase [Roseobacter litoralis Och 149] Length = 451 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 229/445 (51%), Positives = 313/445 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++YF+P+L+ENP +A+I SH+LMLR GMI Q++ GIYSWLPLG K L + I+ EE Sbjct: 1 MRLTRYFMPVLRENPAEAQIVSHRLMLRAGMIKQNAAGIYSWLPLGFKVLRKLENIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G + M +PT+QSADLW ESGRYD+YG EMLR+ DR D+ M++GPT+EE++TDIFRS Sbjct: 61 QIRAGHVPMLMPTMQSADLWRESGRYDAYGPEMLRIRDRQDRDMLFGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVSSYKDLPLTLYHIQWKFRDEMRPRFGVMRGREFFMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLADTGE++VF D + D+D Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLADTGESEVFYDSAVTDLTFGDRDIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + ++E++T YA T + H++ LFD++P ++ ARGIEVG IFYFGTKYS M A Sbjct: 241 SVAQCQGVMEEFTNLYARTDETHDQALFDAIPAERQRKARGIEVGQIFYFGTKYSDAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +G DGK V MGS+GIG R+V A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 KVQGPDGKPTAVHMGSHGIGVSRLVGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDAE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+ +Y L +G D +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACDALYTSLRALGLDPLYDDRKERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R +G +M E+ + + ++ + Sbjct: 421 RKSGESVEMPPEQAVEKIASIYATH 445 >gi|258542706|ref|YP_003188139.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01] gi|256633784|dbj|BAH99759.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01] gi|256636843|dbj|BAI02812.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03] gi|256639896|dbj|BAI05858.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07] gi|256642952|dbj|BAI08907.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22] gi|256646007|dbj|BAI11955.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26] gi|256649060|dbj|BAI15001.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32] gi|256652047|dbj|BAI17981.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655104|dbj|BAI21031.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12] Length = 438 Score = 391 bits (1005), Expect = e-106, Method: Composition-based stats. Identities = 220/438 (50%), Positives = 309/438 (70%), Gaps = 3/438 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ FLP L+ENP +A+I SH+LMLR G+I Q + GIY+WLP G K L N++ I+REE Sbjct: 1 MRLSRSFLPTLKENPAEAQIVSHRLMLRAGLIRQTASGIYAWLPAGLKVLRNISQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GA E+ +PTLQSADLW SGRYD+YG EMLR+ DR+ + ++YGPT+EE++TD+F Sbjct: 61 QDRVGAQEVLMPTLQSADLWKRSGRYDAYGPEMLRIQDRHKRELLYGPTNEEMITDLFGQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFDL E + +Y +M ++ Sbjct: 121 TVKSYKDLPQVLYHIQWKFRDEMRPRFGVMRGREFLMKDAYSFDLDYESAVATYRRMLLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLG++++PMRA++GPIGG+LSHEF++LA TGE+ VF + E D + Sbjct: 181 YLRTFQRLGVRAVPMRADTGPIGGELSHEFLILAPTGESGVFYDAALEEQDWLDEPVDTN 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++L + + T PYAAT ++H+E + ++P ++ RG+EVGHIFYFG KY+ M Sbjct: 241 SPVALEAFFNRVTTPYAATDEMHDEAGWQAVPAERQREGRGVEVGHIFYFGDKYTRSMDV 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G DG Y +MGSYGIG R+ A+IE+ HD GIIWPD+VAPF+ ++N+K D++ Sbjct: 301 SVSGPDGNQLYPEMGSYGIGVSRLAGAIIEACHDDNGIIWPDAVAPFRAVILNLKNGDEL 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C CE+IY+ + +DD E+ G +FA ADL+G P Q++VG + + KVE+K Sbjct: 361 CDAICERIYSTNEEA---FLYDDRAERAGVKFADADLMGHPWQIVVGPRGAKEGKVELKR 417 Query: 421 RLTGIREDMSLEEVINYA 438 R TG R ++S+++ + Sbjct: 418 RATGERHEVSVDDALALV 435 >gi|329114694|ref|ZP_08243453.1| Prolyl-tRNA synthetase [Acetobacter pomorum DM001] gi|326696174|gb|EGE47856.1| Prolyl-tRNA synthetase [Acetobacter pomorum DM001] Length = 459 Score = 391 bits (1003), Expect = e-106, Method: Composition-based stats. Identities = 221/438 (50%), Positives = 309/438 (70%), Gaps = 3/438 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ FLP L+ENP +A+I SH+LMLR G+I Q + GIY+WLP G K L N++ I+REE Sbjct: 22 MRLSRSFLPTLKENPAEAQIVSHRLMLRAGLIRQTASGIYAWLPAGLKVLRNISQIVREE 81 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+R GA E+ +PTLQSADLW SGRYD+YG EMLR+ DR+ + ++YGPT+EE++TD+F Sbjct: 82 QDRVGAQEVLMPTLQSADLWKRSGRYDAYGPEMLRIQDRHKRELLYGPTNEEMITDLFGQ 141 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFDL E + +Y +M ++ Sbjct: 142 TVKSYKDLPQVLYHIQWKFRDEMRPRFGVMRGREFLMKDAYSFDLDYESAVATYRRMLLA 201 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLG++++PMRA++GPIGG+LSHEF++LA TGE+ VF + E D + Sbjct: 202 YLRTFQRLGVRAVPMRADTGPIGGELSHEFLILAPTGESGVFYDAALEEQDWLDEPVDTN 261 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I+L + + T PYAAT ++H+E + ++P ++ RG+EVGHIFYFG KY+ M Sbjct: 262 SPIALEAFFNRVTTPYAATDEMHDEAGWQAVPAERQREGRGVEVGHIFYFGDKYTRSMDV 321 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G DG Y +MGSYGIG R+ A+IE+ HD GIIWPD+VAPF+ ++N+K D++ Sbjct: 322 SVSGPDGNQLYPEMGSYGIGVSRLAGAIIEACHDDNGIIWPDAVAPFRAVILNLKNGDEL 381 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C CE+IY+ + +DD E+ G +FA ADL+G P Q++VG + + KVE+K Sbjct: 382 CDAICERIYSTNEEA---FLYDDRAERAGVKFADADLMGHPWQIVVGPRGAKEGKVELKR 438 Query: 421 RLTGIREDMSLEEVINYA 438 R TG R ++S+++ + Sbjct: 439 RATGERHEVSVDDALALV 456 >gi|695786|emb|CAA58846.1| orf5 [Zymomonas mobilis] Length = 443 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 232/439 (52%), Positives = 307/439 (69%), Gaps = 2/439 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+++E P DA+I SHKLMLR GMI Q + GIY+WLPLG + L IIREE Sbjct: 1 MRLSRYFLPVMKETPADAQIISHKLMLRAGMIRQTASGIYAWLPLGLRVLGRNEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GA E+ +PTLQ+ADLW ESGRYD+YG EMLR DR++ ++YGPT+EE++T + R Sbjct: 61 QARAGAAELLMPTLQTADLWPESGRYDAYGPEMLRFKDRHNCELLYGPTNEEMITALIRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY L FY IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ +H+YN+MFV Sbjct: 121 NLQSYAILAGIFYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDIDETAGRHNYNRMFVG 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL F RLGL++IPM+A++GPIGGDLSHEFIVLA GE VF + + P DFD Sbjct: 181 YLNSFSRLGLRAIPMQADTGPIGGDLSHEFIVLAPNGERHVFYHSN-WEQPTRHIEADFD 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D +L SIV + YAAT + + L ++ +K +RGIEVGHIF+FGTKYS PM Sbjct: 240 DPKALQSIVNDHISDYAATDEKRDP-LREAQAGDKLRQSRGIEVGHIFFFGTKYSKPMGF 298 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G DGK +QMGSYGIG R++ A+IE+SHD GIIWP++VAP+ + LIN++ D+ Sbjct: 299 TLPGPDGKPIPIQMGSYGIGISRLLGAIIEASHDDNGIIWPEAVAPYHVGLINLRIDDEN 358 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 CR + +Y RL G D +DD E+ G++FA DL+G P QV++G K +E+K+ Sbjct: 359 CRAIADSLYQRLEAAGIDTLYDDRNERGGAKFATMDLIGLPWQVVIGPKGAEKGVIELKN 418 Query: 421 RLTGIREDMSLEEVINYAS 439 R +G ++ +S+E+ N + Sbjct: 419 RASGEKQTISVEDAFNLLT 437 >gi|162139874|ref|YP_745105.2| prolyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1] gi|148887022|sp|Q0BSM0|SYP_GRABC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 440 Score = 389 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 226/441 (51%), Positives = 309/441 (70%), Gaps = 4/441 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +A+IASH+LMLR G+I Q + GIY+WLP G + L+ + I+R+E Sbjct: 1 MRLSRALIPTLKETPAEAQIASHRLMLRAGLIQQEAAGIYAWLPAGLRVLNAIANIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q GA E+ +PT+QSADLW ESGRYD+YG EMLRL DR+++ ++YGPT+EEV+TDI+R Sbjct: 61 QAGIGAQEVLMPTIQSADLWRESGRYDAYGPEMLRLKDRHERDLLYGPTNEEVITDIYRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE+RPRFGVMR REFLMKD YSFDL G+ SY ++ +S Sbjct: 121 SVKSYRELPQMAYQIQWKFRDEIRPRFGVMRGREFLMKDGYSFDLDYAGAVRSYRRIMLS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+R F RLG+K+IPM A++GPIGGDLSHEFI+LA TGE++VF F + + + D Sbjct: 181 YMRTFQRLGVKAIPMLADTGPIGGDLSHEFIILAPTGESEVFYDAAFEEIDWSGASFNVD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + T YAAT + H+ +++LPE +R + RGIEVGHIFYFGTKYS ++ Sbjct: 241 SDADLERFFQTITGHYAATDEKHDTAAYEALPEARRRTGRGIEVGHIFYFGTKYSKALNM 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G DG+ + +MGSYGIG R+VAAVIE+SHD GIIWPDS+APF+ +++N+K D Sbjct: 301 TVAGRDGQKLHPEMGSYGIGVSRMVAAVIEASHDEAGIIWPDSIAPFRAAVLNLKNGDAA 360 Query: 361 CRDACEKIYARLSKVGCD-VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 C E +Y ++G +DD E+ G +FA ADL+G P QV++G + + +VE+K Sbjct: 361 CDAMAEDVY---RRIGVRHALYDDRDERAGVKFADADLMGHPWQVVIGPRGAAAGRVELK 417 Query: 420 HRLTGIREDMSLEEVINYASH 440 R TG R ++++E+ + Sbjct: 418 RRRTGERVELTVEDALARIRE 438 >gi|126728909|ref|ZP_01744724.1| prolyl-tRNA synthetase [Sagittula stellata E-37] gi|126710839|gb|EBA09890.1| prolyl-tRNA synthetase [Sagittula stellata E-37] Length = 445 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 233/445 (52%), Positives = 315/445 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A+I SH+LMLR GMI Q GIYSWLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKETPSEAQIVSHRLMLRAGMIKQAQAGIYSWLPLGYKVLKKIENIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PTLQSADLW ESGRY++YG+EMLR+ DR+ + M+YGPT+EE++TDIFRS Sbjct: 61 QQRAGHIPLLMPTLQSADLWRESGRYEAYGEEMLRITDRHGRDMLYGPTNEELITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 YVRSYKDLPLTLYHIQWKFRDEVRPRFGVMRGREFLMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+ GPIGGD +HEF+VLA+TGE++VF + D + + D+D Sbjct: 181 YLRTYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSEITDLKFGTRDIDYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + S++E++T+ YA T + H+E LF +PE +R +ARGIEVG IFYFGTKYS M+A Sbjct: 241 SVEECQSVLEEFTSRYARTDETHDEALFGEIPEERRRTARGIEVGQIFYFGTKYSDAMNA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF +IN+K D Sbjct: 301 VVQDHSGAQVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIINLKQGDAE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE IY L K G + +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACEAIYLDLVKSGLEPLYDDTDERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R TG E+M E+ + ++N+ Sbjct: 421 RRTGESEEMPPEQAVERIRQIYANH 445 >gi|114316122|gb|ABI62182.1| prolyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1] Length = 499 Score = 388 bits (996), Expect = e-105, Method: Composition-based stats. Identities = 226/441 (51%), Positives = 309/441 (70%), Gaps = 4/441 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +A+IASH+LMLR G+I Q + GIY+WLP G + L+ + I+R+E Sbjct: 60 MRLSRALIPTLKETPAEAQIASHRLMLRAGLIQQEAAGIYAWLPAGLRVLNAIANIVRDE 119 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q GA E+ +PT+QSADLW ESGRYD+YG EMLRL DR+++ ++YGPT+EEV+TDI+R Sbjct: 120 QAGIGAQEVLMPTIQSADLWRESGRYDAYGPEMLRLKDRHERDLLYGPTNEEVITDIYRH 179 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE+RPRFGVMR REFLMKD YSFDL G+ SY ++ +S Sbjct: 180 SVKSYRELPQMAYQIQWKFRDEIRPRFGVMRGREFLMKDGYSFDLDYAGAVRSYRRIMLS 239 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+R F RLG+K+IPM A++GPIGGDLSHEFI+LA TGE++VF F + + + D Sbjct: 240 YMRTFQRLGVKAIPMLADTGPIGGDLSHEFIILAPTGESEVFYDAAFEEIDWSGASFNVD 299 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + T YAAT + H+ +++LPE +R + RGIEVGHIFYFGTKYS ++ Sbjct: 300 SDADLERFFQTITGHYAATDEKHDTAAYEALPEARRRTGRGIEVGHIFYFGTKYSKALNM 359 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G DG+ + +MGSYGIG R+VAAVIE+SHD GIIWPDS+APF+ +++N+K D Sbjct: 360 TVAGRDGQKLHPEMGSYGIGVSRMVAAVIEASHDEAGIIWPDSIAPFRAAVLNLKNGDAA 419 Query: 361 CRDACEKIYARLSKVGCD-VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 C E +Y ++G +DD E+ G +FA ADL+G P QV++G + + +VE+K Sbjct: 420 CDAMAEDVY---RRIGVRHALYDDRDERAGVKFADADLMGHPWQVVIGPRGAAAGRVELK 476 Query: 420 HRLTGIREDMSLEEVINYASH 440 R TG R ++++E+ + Sbjct: 477 RRRTGERVELTVEDALARIRE 497 >gi|162148795|ref|YP_001603256.1| prolyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|161787372|emb|CAP56967.1| Prolyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] Length = 476 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 227/438 (51%), Positives = 307/438 (70%), Gaps = 3/438 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ FLP L+ENP +A++ SH+LMLR G+I Q + GIY+WLP G + L N+ I+REE Sbjct: 39 MRLSRGFLPTLKENPAEAQVISHRLMLRAGLIRQTAAGIYAWLPAGWRVLQNIARIVREE 98 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+ GA E+ +PT+QSA+LW SGRYD+YG EMLR+ DR+++ ++YGPT+EE++TD+F Sbjct: 99 QDAIGAQELLMPTVQSAELWKRSGRYDAYGPEMLRIQDRHERELLYGPTNEEMITDLFGQ 158 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFDL + SY +M ++ Sbjct: 159 VVKSYRELPQVLYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDLDYASAVDSYRRMMLA 218 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLG+++IPM A++GPIGG+LSHEF++LA TGE+ VF F + S+ D D Sbjct: 219 YLRTFQRLGVRAIPMVADTGPIGGELSHEFLILAPTGESGVFFDGAFEEQDWLSDPVDID 278 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D SL++ + T+ YAAT + H+E + +P +R RGIEVGHIF+FG KY+ M Sbjct: 279 DRESLDAFFTRMTSFYAATDEKHDEAAWADVPAERRREGRGIEVGHIFHFGRKYTESMDI 338 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G DG Y +MGSYGIG R+VAA+IE+SHD GIIWPDSVAPF+ +++N+K D Sbjct: 339 TVSGPDGAPLYPEMGSYGIGVSRLVAAIIEASHDDNGIIWPDSVAPFRAAILNLKTGDAA 398 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C CE++YA +DD GE+ G +FA ADL+G P QVIVG + + KVE+K Sbjct: 399 CDAICEQVYA---AAPESFLYDDRGERAGVKFADADLMGHPWQVIVGPRGAKEGKVELKR 455 Query: 421 RLTGIREDMSLEEVINYA 438 R G R ++S+++ + Sbjct: 456 RADGARFELSVDDALARI 473 >gi|84515335|ref|ZP_01002697.1| prolyl-tRNA synthetase [Loktanella vestfoldensis SKA53] gi|84510618|gb|EAQ07073.1| prolyl-tRNA synthetase [Loktanella vestfoldensis SKA53] Length = 446 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 220/430 (51%), Positives = 302/430 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E PR+A+I SH+ ML+ GMI Q S GIYSWLPLG K L + I+ +E Sbjct: 1 MRLSRYFLPVLKETPREAQIVSHRYMLQAGMIKQASAGIYSWLPLGFKVLRKIENIVHQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PT+QSADLW ESGRYD+YG+EMLR+ DR + M++ PT EE++TDIFR+ Sbjct: 61 QERAGHIAIQMPTIQSADLWRESGRYDAYGEEMLRIKDRGGREMLFTPTAEELVTDIFRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T YQIQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVTSYKDLPLTLYQIQWKFRDEVRPRFGVMRGREFYMKDGYNFDLTKEDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRA+SGPIGGD +HEF+VLADTGE++VF D D+ Sbjct: 181 YLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLADTGESEVFYDSQITDLKFGDRQIDYS 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D + ++++++T+ YA T + H+ LF+ +PE +R +ARGIEVG IFYFGTKYS M A Sbjct: 241 DHAACAAVLDEFTSRYARTDETHDAALFNQVPEERRRTARGIEVGQIFYFGTKYSDAMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G V MGS+GIG R++ A+IE+SHD KGIIWP+ V PF ++N+K D Sbjct: 301 LVDDGKGGKVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDAE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 AC+ +Y L+ +G + +DD E+ G++F D++G P ++ VG + + + VE+ Sbjct: 361 ADAACQALYDSLTALGLEPLYDDRDERAGTKFGTMDMIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMS 430 R TG E++ Sbjct: 421 RRTGESEELP 430 >gi|319407251|emb|CBI80890.1| Prolyl-tRNA synthetase [Bartonella sp. 1-1C] Length = 441 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 262/439 (59%), Positives = 341/439 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E+P++AE+ SH+ MLR GM+ Q + GIYSWLPLG+K LD + IIREE Sbjct: 1 MRLSQYFLPILKESPKEAEVISHRFMLRAGMVRQQTSGIYSWLPLGKKVLDKICKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GA+E+ +PT+QSADLW ES RY+ YG EMLR+ DR D+ ++YGPT+EE++TDIFRS Sbjct: 61 QERAGALEILMPTIQSADLWRESERYNDYGLEMLRIRDRQDRDLLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMR+REFLMKDAYSFDL +K SYN+MFV+ Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEIRPRFGVMRAREFLMKDAYSFDLDYASAKISYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRA++GPIGG+LSHEFI+LA TGE+ +FC K F++F +PS + DF Sbjct: 181 YLRTFSRIGLKAIPMRADTGPIGGELSHEFIILAKTGESSIFCDKRFLEFTVPSVSIDFT 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L IV QWT+ YAAT ++HNE+ + +P++ ++SARGIEVGHIF+FGTKYS PM A Sbjct: 241 DKDVLADIVRQWTSLYAATEEMHNEEEWSKVPDSNKLSARGIEVGHIFHFGTKYSAPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK+H+V MGSYGIG R+VAAVIESSHD GIIWP S+APF +IN+K D+ Sbjct: 301 KVMGQDGKEHFVSMGSYGIGPSRLVAAVIESSHDEHGIIWPKSIAPFDFGIINMKPDDEK 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C CE +Y L + G D DD GE+ GS+FA DL+G P+Q+I+G K + ++VEIK Sbjct: 361 CSYICETLYQELIRRGFDPLLDDTGERPGSKFATMDLIGLPVQMIIGPKNATQNEVEIKD 420 Query: 421 RLTGIREDMSLEEVINYAS 439 R TG+RE +++E V+N S Sbjct: 421 RKTGLREVLTVEAVLNRFS 439 >gi|319898898|ref|YP_004158991.1| Prolyl-tRNA synthetase [Bartonella clarridgeiae 73] gi|319402862|emb|CBI76413.1| Prolyl-tRNA synthetase [Bartonella clarridgeiae 73] Length = 442 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 255/439 (58%), Positives = 333/439 (75%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AE+ SH+ MLR GM+ Q + GIYSWLPLG+K LD + IIREE Sbjct: 1 MRLSQYFLPILKENPKEAEVVSHRFMLRAGMVRQQTSGIYSWLPLGKKVLDKICKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GA+E+ +PT+QSADLW ESGRY+ YG EMLR+ DR D+ ++YGPT+EE++TDIFRS Sbjct: 61 QERAGAVEILMPTIQSADLWRESGRYNDYGLEMLRIKDRQDRDLLYGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMR+REFLMKDAYSFDL +K SYN+MFV+ Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEIRPRFGVMRAREFLMKDAYSFDLDYASAKTSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IP+RA++GPIGG+LSHEFI+LA+TGE+ +FC K F++F +P + DF Sbjct: 181 YLRTFSRIGLKAIPVRADTGPIGGELSHEFIILAETGESSIFCDKRFLEFTVPPISIDFT 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L IV QWT+ YAAT ++HNE+ + + N +++ARGIEVGHIF+FGTKYS PM A Sbjct: 241 DKDILADIVRQWTSLYAATEEMHNEEEWSKVSTNNKLAARGIEVGHIFHFGTKYSAPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK+H + MGSYGIG R+VAA+IESSHD GIIWP + PF +IN+K D+ Sbjct: 301 KVMGQDGKEHLISMGSYGIGPSRLVAAIIESSHDEHGIIWPKPITPFDCGIINMKPDDEK 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C CE +Y RL G D DD E+ GS+FA DL+G P+Q+I+G K + ++VEIK Sbjct: 361 CSYMCETLYQRLIHGGFDPLLDDTNERPGSKFATMDLIGLPIQMIIGPKSAAQNEVEIKD 420 Query: 421 RLTGIREDMSLEEVINYAS 439 R T RE +++E +N S Sbjct: 421 RKTDAREILTVEAALNRFS 439 >gi|293374695|ref|ZP_06621003.1| proline--tRNA ligase [Turicibacter sanguinis PC909] gi|325840610|ref|ZP_08167091.1| proline--tRNA ligase [Turicibacter sp. HGF1] gi|292646609|gb|EFF64611.1| proline--tRNA ligase [Turicibacter sanguinis PC909] gi|325490259|gb|EGC92592.1| proline--tRNA ligase [Turicibacter sp. HGF1] Length = 420 Score = 384 bits (986), Expect = e-104, Method: Composition-based stats. Identities = 185/446 (41%), Positives = 264/446 (59%), Gaps = 30/446 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F+P L+E P DAEI SH+ +LR G I Q + G+Y++LPL ++ L+NV I+R+E Sbjct: 1 MKQSMMFIPTLREVPSDAEIRSHQFLLRAGFIKQVAAGVYTYLPLAKRVLNNVEGIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P LQ +LW ESGR+D YG E++RL DRN++ GPTHEEV+T + R Sbjct: 61 LDAIGGNELLMPALQPKELWDESGRWDVYGSELMRLTDRNNREFALGPTHEEVITHVVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP T YQIQ KFRDE RPRFG+MR REF+MKDAYSF T E +YN + Sbjct: 121 FLNSYKKLPLTVYQIQTKFRDEARPRFGLMRGREFIMKDAYSFHATQESLDEAYNNFVKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG IGG S EF+ LA+ GE + S Sbjct: 181 YTNIFTRCGLNFRMVEADSGQIGGSQSAEFMALAEVGEDTIVYST--------------- 225 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPM 298 T +AA +V + ++ P+ V A+GIEVGH+F GTKYS PM Sbjct: 226 ------------TGSFAANIEVADLEVGAPSPDGVGVVAHAKGIEVGHVFKLGTKYSEPM 273 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 +A F + K + MG YGIG RV+ AVIE ++D G+IWP +APF I ++ + Sbjct: 274 NAVFLDENQKKQPIIMGCYGIGVSRVMMAVIEQNNDENGMIWPKGIAPFDIHVVPVDVKK 333 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 +A E IYA L G +V DD E+ G +F+ ADL+G P+++ VG + ++D VE+ Sbjct: 334 ADQLEAAENIYAELKAAGFEVLLDDRKERAGVKFSDADLIGLPIRITVG-RGIADGIVEV 392 Query: 419 KHRLTGIREDMSLEEVINYASHRFSN 444 K R TG ++++ +++ + ++ Sbjct: 393 KVRQTGEVAEVAVADLMTFVKEKYET 418 >gi|149914370|ref|ZP_01902901.1| prolyl-tRNA synthetase [Roseobacter sp. AzwK-3b] gi|149811889|gb|EDM71722.1| prolyl-tRNA synthetase [Roseobacter sp. AzwK-3b] Length = 455 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 232/447 (51%), Positives = 315/447 (70%), Gaps = 1/447 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E P +A+IASH+LMLR GMI Q S GIYSWLP+G K L + I+ EE Sbjct: 1 MRLSRYFLPVLKETPAEAQIASHRLMLRAGMIKQASAGIYSWLPMGFKVLRKLENIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R + M +PTLQ ADLW ESGRYD YG+EMLR+ DR + ++YGPT+EE++TDIFRS Sbjct: 61 QIRARHVPMLMPTLQPADLWRESGRYDDYGEEMLRIKDRQGRDLLYGPTNEELITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SY++LP T Y IQ KFRDE+RPRFGVMR REF MKD Y+FDLT E + H+YN+ VS Sbjct: 121 HVGSYKDLPLTLYHIQWKFRDEIRPRFGVMRGREFFMKDGYNFDLTREDALHAYNRHLVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL++IPMRAESGPIGGD +HEF+VLA+TGE+ VF + D D+ Sbjct: 181 YLRTYERMGLQAIPMRAESGPIGGDDTHEFLVLAETGESGVFYDSEITDLRFGDREIDYT 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLF-DSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + +++E++T+ YA T D H+E +F D +PE +R S RGIEVG IFYFGTKYS PM Sbjct: 241 SVEACQAVMEEFTSRYARTDDTHDESVFHDRVPEERRRSGRGIEVGQIFYFGTKYSEPMG 300 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 AT + DG V MGS+GIG R++ A+IE+SHD +GIIWP+ V PF ++N+K D Sbjct: 301 ATVQDRDGNTVPVHMGSHGIGVSRLIGAIIEASHDDRGIIWPEGVTPFHAGIVNLKTGDA 360 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ACE IYA L+ +G + +DD ++ G++FA DL+G P ++ VG + + + VE+ Sbjct: 361 EADAACEAIYASLTALGLEPLYDDTDDRAGAKFATMDLIGLPWRITVGPRGLKNGVVELT 420 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 R TG E++ E+ + + ++ +R Sbjct: 421 SRRTGESEELPPEQAVEKLARIYAAHR 447 >gi|209545456|ref|YP_002277685.1| prolyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|209533133|gb|ACI53070.1| prolyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] Length = 438 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 227/438 (51%), Positives = 307/438 (70%), Gaps = 3/438 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ FLP L+ENP +A++ SH+LMLR G+I Q + GIY+WLP G + L N+ I+REE Sbjct: 1 MRLSRGFLPTLKENPAEAQVISHRLMLRAGLIRQTAAGIYAWLPAGWRVLQNIARIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+ GA E+ +PT+QSA+LW SGRYD+YG EMLR+ DR+++ ++YGPT+EE++TD+F Sbjct: 61 QDAIGAQELLMPTVQSAELWKRSGRYDAYGPEMLRIQDRHERELLYGPTNEEMITDLFGQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFDL + SY +M ++ Sbjct: 121 VVKSYRELPQVLYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDLDYASAVDSYRRMMLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLG+++IPM A++GPIGG+LSHEF++LA TGE+ VF F + S+ D D Sbjct: 181 YLRTFQRLGVRAIPMVADTGPIGGELSHEFLILAPTGESGVFFDGAFEEQDWLSDPVDID 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D SL++ + T+ YAAT + H+E + +P +R RGIEVGHIF+FG KY+ M Sbjct: 241 DRESLDAFFTRMTSFYAATDEKHDEAAWADVPAERRREGRGIEVGHIFHFGRKYTESMDI 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G DG Y +MGSYGIG R+VAA+IE+SHD GIIWPDSVAPF+ +++N+K D Sbjct: 301 TVSGPDGAPLYPEMGSYGIGVSRLVAAIIEASHDDNGIIWPDSVAPFRAAILNLKTGDAA 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C CE++YA +DD GE+ G +FA ADL+G P QVIVG + + KVE+K Sbjct: 361 CDAICEQVYA---AAPESFLYDDRGERAGVKFADADLMGHPWQVIVGPRGAKEGKVELKR 417 Query: 421 RLTGIREDMSLEEVINYA 438 R G R ++S+++ + Sbjct: 418 RADGARFELSVDDALARI 435 >gi|296116519|ref|ZP_06835129.1| prolyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] gi|295976731|gb|EFG83499.1| prolyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] Length = 439 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 224/438 (51%), Positives = 301/438 (68%), Gaps = 3/438 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ FLP L+ENP +A+I SH+LMLR G+I Q S GIY+WLP G K L N+ I+R E Sbjct: 1 MRLSRSFLPTLKENPAEAQITSHRLMLRAGLIRQTSAGIYAWLPAGLKVLRNIANIVRAE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+ GA EM +PTLQS++LW SGRYD+YG EMLR+ DR+++ ++YGPT+EE++TD+F Sbjct: 61 QDAIGAQEMLMPTLQSSELWKRSGRYDAYGPEMLRIRDRHERDLLYGPTNEEMVTDLFGQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP Y +Q KFRDE+RPRFGVMR REF MKDAYSFD + + SY +M ++ Sbjct: 121 VVKSYRELPQVLYHVQWKFRDEVRPRFGVMRGREFYMKDAYSFDADYDAAVDSYRRMMLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLG+K+IPM A++GPIGG+LSHEF+VLA TGE+ VF F + SE D Sbjct: 181 YLRTFQRLGVKAIPMVADTGPIGGELSHEFLVLAPTGESGVFFDGAFEEQDWLSEEVDIA 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D SL + T+ YAAT + H+E + +P +R RGIEVGHIF+FG KY+ M Sbjct: 241 DRASLAKFFARMTSFYAATDEKHDEAQWAKVPVERRREGRGIEVGHIFHFGRKYTESMDI 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G DG + +MGSYGIG R+VAA+IE+SHD +GIIWP++VAPF +IN+K D Sbjct: 301 SVSGPDGAPLFPEMGSYGIGVSRLVAAIIEASHDEQGIIWPETVAPFGAVIINLKNGDAQ 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C + CE++YA + +DD E+ G +FA ADL+G P QVIVG + VE+K+ Sbjct: 361 CDEICERLYA---AAPDRLLYDDRPERAGVKFADADLMGHPWQVIVGPRGAKAGVVELKN 417 Query: 421 RLTGIREDMSLEEVINYA 438 R +G R ++ ++ V+ Sbjct: 418 RASGERSELPIDAVLTRI 435 >gi|319404243|emb|CBI77836.1| Prolyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498] Length = 441 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 260/439 (59%), Positives = 339/439 (77%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+E+P++AE+ SH+ MLR GM+ Q + GIYSWLPLG+K LD + IIREE Sbjct: 1 MRLSQYFLPILKESPKEAEVISHRFMLRAGMVRQQTSGIYSWLPLGKKVLDKICKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GA+E+ +PT+QSADLW ES RY+ YG EMLR+ DR D+ ++YGPT+EE++TDIFRS Sbjct: 61 QERAGALEILMPTIQSADLWRESERYNDYGLEMLRIRDRQDRDLLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMR+REFLMKDAYSFDL +K SYN+MFV+ Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEIRPRFGVMRAREFLMKDAYSFDLDYASAKISYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRA++GPIGG+LSHEFI+LA TGE+ +FC K F++F +PS + DF Sbjct: 181 YLRTFSRVGLKAIPMRADTGPIGGELSHEFIILAKTGESSIFCDKRFLEFTVPSVSIDFT 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L IV QWT+ YAAT ++HNE+ + + ++ ++SARGIEVGHIF+FGTKYS PM A Sbjct: 241 DKDVLADIVRQWTSLYAATEEMHNEEEWSKVSDSNKLSARGIEVGHIFHFGTKYSAPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK+H+V MGSYGIG R+VAAVIESSHD GIIWP S+APF +IN+K D+ Sbjct: 301 KVMGQDGKEHFVSMGSYGIGPSRLVAAVIESSHDEHGIIWPKSIAPFDFGIINMKPDDEK 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C CE +Y L + G D DD E+ GS+FA DL+G P+Q+I+G K + ++VEIK Sbjct: 361 CSYICETLYQGLIRSGFDPLLDDTSERPGSKFATMDLIGLPVQMIIGPKNATQNEVEIKD 420 Query: 421 RLTGIREDMSLEEVINYAS 439 R TG+RE +++E V+N S Sbjct: 421 RKTGLREVLTVEAVLNRFS 439 >gi|330994071|ref|ZP_08318001.1| Prolyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1] gi|329759017|gb|EGG75531.1| Prolyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1] Length = 440 Score = 382 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 225/438 (51%), Positives = 303/438 (69%), Gaps = 3/438 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ FLP L+ENP +A+I SH+LMLR GMI Q + GIY+WLP G + L N+ I+R E Sbjct: 1 MRLSRSFLPTLKENPTEAQITSHRLMLRAGMIRQTAAGIYAWLPTGLRVLRNIANIVRAE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+ GA E+ +PT+QSA+LW SGRYD+YG EMLR+ DR+++ M++GPT+EE++TD+F Sbjct: 61 QDAIGAQELLMPTMQSAELWKRSGRYDAYGPEMLRIQDRHERDMLFGPTNEEMVTDLFGQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR REF MKDAYSFDL + +Y +M +S Sbjct: 121 AIKSYKELPQVLYQIQWKFRDEVRPRFGVMRGREFYMKDAYSFDLDHAAAVDTYRRMMLS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RLG+++IPMRA++GPIGG+LSHEF++LA TGE+ VF + E D + Sbjct: 181 YLRTFQRLGVRAIPMRADTGPIGGELSHEFLILAPTGESGVFFDSALEEQDWVGETIDVN 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D +L + T+ YAAT ++H+E + +P +R RGIEVGHIF FG KY+ M Sbjct: 241 DRDALGAFFTSLTSFYAATDEMHDEAAWAKVPAERRREGRGIEVGHIFNFGRKYTQSMDI 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG + +MGSYGIG R+VAA+IE+SHD GIIWP+SVAPF+ +IN+K D Sbjct: 301 AVSGPDGAPLHPEMGSYGIGVSRLVAAIIEASHDENGIIWPESVAPFRAVIINLKNGDAQ 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C CEK+YA D+ +DD E+ G++FA ADLLG P Q+IVG + + KVE+K+ Sbjct: 361 CDAICEKLYA---AAPDDLLYDDRAERAGAKFADADLLGHPWQLIVGPRGAKEGKVEVKN 417 Query: 421 RLTGIREDMSLEEVINYA 438 R TG R + +++ + Sbjct: 418 RRTGERTEETVDAALALI 435 >gi|58038568|ref|YP_190532.1| prolyl-tRNA synthetase [Gluconobacter oxydans 621H] gi|81819190|sp|Q5FUU9|SYP_GLUOX RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|58000982|gb|AAW59876.1| Prolyl-tRNA synthetase [Gluconobacter oxydans 621H] Length = 438 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 225/442 (50%), Positives = 301/442 (68%), Gaps = 11/442 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K F P L+E P +A+IASH+LMLR G++ Q + GIY+WLP G + L N+ IIREE Sbjct: 1 MRLTKAFQPTLKEVPAEAQIASHRLMLRAGLVRQTASGIYAWLPAGLRVLRNIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q+ GA E+ +PTLQSA+LW SGRYD+YG EMLR+ DR+ + ++YGPT+EE++TDIF S Sbjct: 61 QDAIGAQEVLMPTLQSAELWRRSGRYDAYGPEMLRIQDRHGRDLLYGPTNEEMITDIFGS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD + EG+ SY +M +S Sbjct: 121 SVKSYKELPKALYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDASYEGAVASYRRMMLS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLRIF RLG++++PM A++GPIGGDLSHEF+VLA TGE+ VF + S D D Sbjct: 181 YLRIFQRLGVRAVPMVADTGPIGGDLSHEFLVLAPTGESAVFFDAALEEQDWLSRPVDCD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D SL + T YAAT + H+E + +P ++ RGIEVGHIFYFGTKY+ M Sbjct: 241 DAESLATFFATVTDHYAATDEKHDEAEWAKVPAERKREGRGIEVGHIFYFGTKYTASMGI 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG + MGSYG+G R+V A+IE+SHD GIIWP SVAP++ +++N++ D+ Sbjct: 301 EVSGPDGAPFHPHMGSYGVGVSRLVGAIIEASHDDAGIIWPASVAPYRAAILNLRQDDEA 360 Query: 361 CRDACEKIY----ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C C++IY L +DD E+ G +F ADL+G P Q+IVG + + KV Sbjct: 361 CDAICDRIYGTDPENL-------LYDDRSERAGVKFNDADLMGHPWQIIVGPRGAKEGKV 413 Query: 417 EIKHRLTGIREDMSLEEVINYA 438 E+K R TG R ++S+E+ + Sbjct: 414 ELKQRATGERFELSVEDALAKI 435 >gi|148259950|ref|YP_001234077.1| prolyl-tRNA synthetase [Acidiphilium cryptum JF-5] gi|326403096|ref|YP_004283177.1| prolyl-tRNA synthetase [Acidiphilium multivorum AIU301] gi|166980092|sp|A5FX26|SYP_ACICJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|146401631|gb|ABQ30158.1| prolyl-tRNA synthetase [Acidiphilium cryptum JF-5] gi|325049957|dbj|BAJ80295.1| prolyl-tRNA synthetase [Acidiphilium multivorum AIU301] Length = 437 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 223/439 (50%), Positives = 308/439 (70%), Gaps = 3/439 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +A+I SH+LMLR G+I Q S GIY+WLP G + L N+ I+REE Sbjct: 1 MRLSRSLIPTLKETPAEAQIVSHRLMLRAGLIRQQSAGIYAWLPAGLRVLHNIANIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G+ E+ +PT+QSA+LW ESGRYD+YG EMLR+ DR+D+ M+YGPT+EE++T I R Sbjct: 61 QARAGSQEILMPTIQSAELWRESGRYDAYGPEMLRIRDRHDREMLYGPTNEEMLTAIMRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR+LP YQIQ KFRDE+RPRFGV+R REF MKD YSFDL EG+ SY +M ++ Sbjct: 121 SVQSYRDLPQMLYQIQWKFRDEVRPRFGVLRGREFYMKDGYSFDLDYEGAVESYRRMMLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+R F R+G++++PMRA++GPIGG+LSHEF +LA TGE+ VF F + + D++ Sbjct: 181 YMRTFKRMGVRAVPMRADTGPIGGNLSHEFHILAPTGESGVFYDSSFETIELGDDAYDYE 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L++ ++ T+ YAAT + H+E + +PE++R RGIEVG IFYFGTKYS M+ Sbjct: 241 ARADLDAFFDRMTSLYAATDEKHDEAAWAKVPEDRRREGRGIEVGQIFYFGTKYSQAMNF 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G DG + +MGSYGIG R+ A+IE+SHD GIIWPD++APF+ S++N++ DQV Sbjct: 301 TVVGPDGARLHPEMGSYGIGVSRLTGAIIEASHDEAGIIWPDAIAPFRASILNLRQGDQV 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 CE+IY L G D +DD + G +FA ADL+G P QVIVG + + +VE+KH Sbjct: 361 TDALCERIYDAL---GRDALYDDREARAGEKFADADLMGHPWQVIVGPRGAAKGQVELKH 417 Query: 421 RLTGIREDMSLEEVINYAS 439 R TG R ++ +E + Sbjct: 418 RRTGERAELDIESALAKVR 436 >gi|310815331|ref|YP_003963295.1| prolyl-tRNA synthetase [Ketogulonicigenium vulgare Y25] gi|308754066|gb|ADO41995.1| prolyl-tRNA synthetase [Ketogulonicigenium vulgare Y25] Length = 445 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 231/433 (53%), Positives = 314/433 (72%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+ENP +A+I SH+ MLR GMI Q S GIY+WLPLG K L + I+ EE Sbjct: 1 MRLSRYFLPVLKENPAEAQILSHRYMLRAGMIKQESAGIYAWLPLGYKVLSRLEKIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G I + +PTLQSADLW ESGRYD+YG EMLR+ DRN + M++GPT+EE++TDIFRS Sbjct: 61 QQRAGHIPLLMPTLQSADLWRESGRYDAYGPEMLRMTDRNKREMLFGPTNEEMITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP T Y IQ KFRDE+RPRFGVMR REFLMKD Y+FDLT E + H+YN+ VS Sbjct: 121 YVRSYKDLPLTLYHIQWKFRDEMRPRFGVMRGREFLMKDGYNFDLTREDALHAYNRHMVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR + R+GL +IPMRA+SGPIGGD +HEF+VLA+TGE++VF +D + ++D Sbjct: 181 YLRTYERMGLTAIPMRADSGPIGGDDTHEFLVLANTGESEVFYDEDVTRLKLGERAINYD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + +I +++T PYA T + H+ LFD++PE +R RGIEVG IFYFGTKYS PM A Sbjct: 241 NREEVAAICQEFTTPYARTDETHDAALFDAIPEGRRKVGRGIEVGQIFYFGTKYSEPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T + A+GK V+MGS+GIG R++ A+IE++HD KGIIWP+ V PF + ++N+K D Sbjct: 301 TVQNAEGKQVPVEMGSHGIGVSRLIGALIEANHDDKGIIWPEGVTPFHVGIVNLKQGDAE 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ACE ++ +G D +DD E+ G +FA DL+G P ++ VG + + + VE+ Sbjct: 361 ADAACEALHDSFVALGLDPLYDDRDERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS 420 Query: 421 RLTGIREDMSLEE 433 R TG+ E++ EE Sbjct: 421 RRTGVSEELPPEE 433 >gi|319405682|emb|CBI79305.1| Prolyl-tRNA synthetase [Bartonella sp. AR 15-3] Length = 441 Score = 376 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 259/439 (58%), Positives = 335/439 (76%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AE+ SH+ MLR GMI Q + GIYSWLPLG+K LD + IIREE Sbjct: 1 MRLSQYFLPILKENPKEAEVVSHRFMLRAGMIRQQTSGIYSWLPLGKKVLDKICKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R GA+E+ +PT+QSADLW ES RY+ YG EMLR+ DR D+ ++YGPT+EE++TDIFRS Sbjct: 61 QERIGALEILMPTIQSADLWRESNRYNDYGLEMLRIKDRQDRDLLYGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMR+REFLMKDAYSFDL +K SYN+MFV+ Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEIRPRFGVMRAREFLMKDAYSFDLDYASAKTSYNRMFVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F R+GLK+IPMRA++GPIGG+LSHEFI+L++TGE+ +FC K F++F IPS + DF Sbjct: 181 YLRTFSRIGLKAIPMRADTGPIGGELSHEFIILSETGESSIFCDKRFLEFTIPSVSIDFT 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D L +V QWT+ YAAT ++HNE+ ++ + ++SARGIEVGHIF+FGTKYS PM A Sbjct: 241 DKDVLADVVRQWTSLYAATEEMHNEEEWNKVSAMNKLSARGIEVGHIFHFGTKYSAPMGA 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK+ V MGSYGIG R+VAAVIESSHD GIIWP SVAPF +IN+K DQ Sbjct: 301 KIMGQDGKERLVSMGSYGIGPSRLVAAVIESSHDEHGIIWPKSVAPFDFGIINMKPDDQK 360 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C CE +Y L + G D DD E+ GS+FA DL+G P+Q+I+ K V+ ++VEIK Sbjct: 361 CSYICETLYQGLIRNGFDPLLDDTSERPGSKFATMDLIGLPVQMIISPKNVTQNEVEIKD 420 Query: 421 RLTGIREDMSLEEVINYAS 439 R TG RE +++E ++ + Sbjct: 421 RKTGFREVLTVEAALHRFA 439 >gi|86281359|gb|ABC90422.1| prolyl-tRNA synthetase protein [Rhizobium etli CFN 42] Length = 410 Score = 366 bits (940), Expect = 4e-99, Method: Composition-based stats. Identities = 267/408 (65%), Positives = 333/408 (81%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 MI Q S+GIYSWLPLG++ LD VNAIIREEQNR GAIE+S+PTLQSA+LW ESGRYD+YG Sbjct: 1 MIRQQSQGIYSWLPLGKRVLDKVNAIIREEQNRAGAIELSMPTLQSAELWQESGRYDAYG 60 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVM 150 KEMLR+ DR D+ M+YGPT+EE++TDIFRS +KSY++LP Y IQLKFRDE+RPRFG M Sbjct: 61 KEMLRIKDRQDRPMLYGPTNEEMVTDIFRSSVKSYKDLPLNLYHIQLKFRDEIRPRFGTM 120 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 RSREF+MKDAYSFDLT EG++HSYNKMF +YLR F RLGL++IPMRA++GPIGG+LSHEF Sbjct: 121 RSREFMMKDAYSFDLTREGAEHSYNKMFAAYLRTFERLGLRAIPMRADTGPIGGNLSHEF 180 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 I+LADTGE++VFC KDF+ F IP ENTDFD + L +I ++WT+ YAATS++H+E F++ Sbjct: 181 IILADTGESEVFCHKDFVGFDIPGENTDFDSVEGLKAIFDKWTSLYAATSEMHDEAAFNA 240 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 +PE R+SARGIEVGHIFYFGTKYS PM A +G DGK+H+V MGSYGIG R+V A+IE Sbjct: 241 VPEGDRLSARGIEVGHIFYFGTKYSEPMGAKVQGPDGKEHFVHMGSYGIGPTRLVPAIIE 300 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 +SHD GIIWP SVAPF + +IN+K DQ C D CE IYA L K G DV +DD ++ G+ Sbjct: 301 ASHDDNGIIWPASVAPFDVVVINMKVGDQACDDTCELIYAALKKAGKDVLYDDTDDRAGT 360 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 +FA ADL+G P+Q+I G + V++ +VE+K R TG RE M++E IN Sbjct: 361 KFATADLIGVPVQIIAGPRAVANGEVEVKDRKTGARETMTIEAAINRF 408 >gi|190570494|ref|YP_001974852.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019252|ref|ZP_03335059.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190356766|emb|CAQ54125.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995361|gb|EEB56002.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 419 Score = 363 bits (931), Expect = 4e-98, Method: Composition-based stats. Identities = 218/441 (49%), Positives = 301/441 (68%), Gaps = 22/441 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y+LP L+E P AEI SH+ +LR G+I Q + GIYSWLPLG L N+ IIR+E Sbjct: 1 MRLSQYYLPTLKETPAGAEIISHQYLLRAGLIKQTASGIYSWLPLGLLVLKNIENIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GAIE+ +P +Q A LW ESGRYD YGKEMLR+ DR++ M++GPTHEEV+TD+ R+ Sbjct: 61 ---IGAIEVLMPCVQPASLWRESGRYDDYGKEMLRIKDRHESDMLFGPTHEEVVTDLIRN 117 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP YQIQ KFRDE+RPR+GVMR REFLMKDAYSFD+ EG+ +SYN M+ + Sbjct: 118 TVKSYKDLPLCLYQIQWKFRDEVRPRYGVMRGREFLMKDAYSFDVDYEGALNSYNLMYKT 177 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF R+GL I +RA++GPIGG+LSHEF +LA+TGE+ ++ + + Sbjct: 178 YIKIFKRMGLTPIGVRADTGPIGGNLSHEFHILANTGESTLYYDNKLFELLESED----- 232 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 +E + YA D+H+ + + + + ++GIE+GHIFYFG KYS PM A Sbjct: 233 --------IESLKSIYAVADDMHDPESC-PITQEQLNVSKGIEIGHIFYFGDKYSKPMKA 283 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + DGK+ + MGSYGIG R+V A+IE+ HD KGIIWP++VAPFK+ LIN++ Sbjct: 284 SVTSQDGKNVNMHMGSYGIGVSRLVGAIIEAFHDDKGIIWPEAVAPFKVGLINLQTK--- 340 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 +A +KIY L +V +DD E +G +FA DL+G P Q+I+G K VS++ VE+K+ Sbjct: 341 VTEAADKIYKALKSD--EVLYDDTDESVGVKFARMDLIGLPWQIIIGKKAVSENIVEVKN 398 Query: 421 RLTGIREDMSLEEVINYASHR 441 R TG E++ +EE IN S + Sbjct: 399 RATGEVEEIQVEEAINRFSAK 419 >gi|91205619|ref|YP_537974.1| prolyl-tRNA synthetase [Rickettsia bellii RML369-C] gi|157827332|ref|YP_001496396.1| prolyl-tRNA synthetase [Rickettsia bellii OSU 85-389] gi|114152245|sp|Q1RIC9|SYP_RICBR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|166980150|sp|A8GU77|SYP_RICB8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|91069163|gb|ABE04885.1| Prolyl-tRNA synthetase [Rickettsia bellii RML369-C] gi|157802636|gb|ABV79359.1| prolyl-tRNA synthetase [Rickettsia bellii OSU 85-389] Length = 432 Score = 362 bits (930), Expect = 5e-98, Method: Composition-based stats. Identities = 211/433 (48%), Positives = 298/433 (68%), Gaps = 13/433 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SKYFLP+L+E+P +A+I SHKLMLR+GMI Q + GIYSWLPLG K L N+ I+R Sbjct: 1 MLLSKYFLPVLKEDPSEAQITSHKLMLRSGMIRQQAAGIYSWLPLGLKVLKNIENIVRSN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G +E+ +P +Q A LWVESGR+D+YGKEML+ DR+D +++GPT+E+++TDIFR+ Sbjct: 61 MDKAGCLEVLMPCIQPAHLWVESGRFDNYGKEMLKFQDRHDNTLLFGPTNEDMVTDIFRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ E + +YN+M+ + Sbjct: 121 NIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDIDEESAVKTYNQMYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ F LG+ ++P+ A++GPIGG LSHEF ++A+TGE+ ++ K F Sbjct: 181 YINTFRDLGVFAVPVIADNGPIGGKLSHEFHIIAETGESNIYYDKRFKTLKDN------- 233 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +E+ + YAA + H+ S + + S++GIEVGHIFY GTKYS+ M+A Sbjct: 234 ----PDIDIEEIKSWYAAAEEKHDASKLSS--DKEITSSKGIEVGHIFYIGTKYSVNMNA 287 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 GK ++M SYGIG R+VAA+IE++ D KGIIWP +VAPFKISLIN+ HD Sbjct: 288 LINDEHGKLTPIEMSSYGIGISRLVAAIIEANSDAKGIIWPIAVAPFKISLINLNIHDSK 347 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C + E++Y L +V +DD + GS+FA DL+G P Q+I+G K +++ VE+K+ Sbjct: 348 CLELAERVYNELLAQNIEVLYDDTDVRAGSKFATHDLIGSPYQIIIGPKKAANNIVELKN 407 Query: 421 RLTGIREDMSLEE 433 R G ED+ L + Sbjct: 408 RKNGEIEDIDLNK 420 >gi|58584338|ref|YP_197911.1| prolyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|81311670|sp|Q5GTK5|SYP_WOLTR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|58418654|gb|AAW70669.1| Prolyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 425 Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats. Identities = 215/439 (48%), Positives = 296/439 (67%), Gaps = 16/439 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y+LP L+E P A I SH+ LR G+I Q + GIY+WLPLG + L N+ IIR+E Sbjct: 1 MRLSQYYLPTLKEKPAHARIISHQYSLRAGLIKQIASGIYTWLPLGLRVLKNIEGIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GAIE +P +Q A LW ESGRYD YGK MLR+ DR+++ M++GPTHEEV TD+ R Sbjct: 61 MNKSGAIEALMPCVQPASLWRESGRYDDYGKTMLRIRDRHEEDMLFGPTHEEVATDLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+NLP YQIQ KFRDE+RPR+GVMR REFLMKDAYSF++ E + +SYN M+ + Sbjct: 121 IVKSYKNLPLCLYQIQWKFRDEVRPRYGVMRGREFLMKDAYSFNVNYESALNSYNLMYKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF R+GL I +RA++G IGG+LSHEF +LA TGE+ ++ F + + Sbjct: 181 YIKIFKRMGLIPIGVRADTGLIGGNLSHEFHILASTGESTLYYDNKFFELLESED----- 235 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 V+ + YA D+H+ K +P+ + ++GIE+GHIFYFG KYS PM+A Sbjct: 236 --------VKSLKSIYAVADDIHDPK-TCPVPQEQLNVSKGIEIGHIFYFGDKYSKPMNA 286 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 DGK+ + MGSYGIG R+V A+IE+ HD KGI WP++VAPF++ LIN++ Sbjct: 287 KVTAQDGKNVNIHMGSYGIGVSRLVGAIIEAFHDDKGITWPEAVAPFRVGLINLQTKTAE 346 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + KIY+ L +V +DD IG +FA DL+G P Q+IVG K VS++ +EIK+ Sbjct: 347 YVEIANKIYSTLKSD--EVLYDDTEGSIGVKFAKMDLIGLPWQIIVGKKAVSENIIEIKN 404 Query: 421 RLTGIREDMSLEEVINYAS 439 R TG E++ +EE INY + Sbjct: 405 RATGKVEEVQIEEAINYFN 423 >gi|157803870|ref|YP_001492419.1| prolyl-tRNA synthetase [Rickettsia canadensis str. McKiel] gi|166980151|sp|A8EZ51|SYP_RICCK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157785133|gb|ABV73634.1| prolyl-tRNA synthetase [Rickettsia canadensis str. McKiel] Length = 438 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 213/446 (47%), Positives = 302/446 (67%), Gaps = 12/446 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SKYFLP+L+E P +A+I SHKLMLR+GMI Q + GIY+WLPLG K L N+ I+R Sbjct: 1 MLLSKYFLPVLKEEPSEAQITSHKLMLRSGMIRQQAAGIYTWLPLGLKILKNIENIVRSN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A LW+ESGR+++YGKEML+ DR+D +++GPT+E+++TDIFR Sbjct: 61 MNKAGALEVLMPCIQPAHLWMESGRFENYGKEMLKFQDRHDNTLLFGPTNEDMITDIFRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ E + +YN+MF + Sbjct: 121 NIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINEENAVKTYNQMFKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ F LG+ +IP+ A++GPIGG+LS+EF ++A+TGE+ ++ K F F Sbjct: 181 YINTFRDLGVFAIPVIADNGPIGGNLSNEFHIIAETGESTLYYDKRFKIFKDN------- 233 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + VE+ + YAA+ + H+ + E + S++GIEVGHIFY G+KYS+ M+A Sbjct: 234 ----PDIDVEEIKSWYAASEEKHDVNKL-PISEQEITSSKGIEVGHIFYIGSKYSVNMNA 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 GK V+M SYGIG R+VAA+IE++ D KGIIWP SVAPFK+SLIN+ HD Sbjct: 289 LINDEHGKLTPVEMSSYGIGISRLVAAIIEANCDEKGIIWPSSVAPFKVSLINLNIHDSK 348 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C + E+ Y LS +V +DD + GS+FA DL+G P Q+I+G K +++ VE K+ Sbjct: 349 CTELAERAYKELSAQNIEVLYDDTDVRPGSKFATHDLIGSPYQIIIGPKKAANNIVEFKN 408 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R +G+ ED+ + + + Sbjct: 409 RKSGVIEDIKIGNLKKLIMSCLRQQK 434 >gi|67458992|ref|YP_246616.1| prolyl-tRNA synthetase [Rickettsia felis URRWXCal2] gi|75536572|sp|Q4ULX2|SYP_RICFE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|67004525|gb|AAY61451.1| Prolyl-tRNA synthetase [Rickettsia felis URRWXCal2] Length = 427 Score = 360 bits (923), Expect = 4e-97, Method: Composition-based stats. Identities = 215/439 (48%), Positives = 303/439 (69%), Gaps = 12/439 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SKYFLP+L+E P +A++ SHKLMLR+GMI Q + GIY+WLPLG K L N+ I+R Sbjct: 1 MLLSKYFLPVLKEEPSEAQVTSHKLMLRSGMIRQQAAGIYTWLPLGLKVLKNIENIVRSN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A LW+ESGR+D+YGKEML+ DR+D +++GPT+E+++TDIFR Sbjct: 61 MNKAGALEVLMPCIQPAHLWMESGRFDNYGKEMLKFQDRHDNTLLFGPTNEDMITDIFRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ E + +YN+M+ + Sbjct: 121 NIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINEENAVKTYNQMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ F LG+ +IP+ A++GPIGG+LSHEF ++A+TGE+ ++ +K F Sbjct: 181 YINTFRDLGVFAIPVIADNGPIGGNLSHEFHIIAETGESTIYYNKRFKTLKDN------- 233 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 N VE+ + YAA + H+ + E + S++GIEVGHIFY G+KYS+ M+A Sbjct: 234 ----PNIDVEEIKSWYAAAEEKHDVNKL-PISEQEITSSKGIEVGHIFYIGSKYSVNMNA 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 GK V+M SYGIG R+VAA+IE++ + KGIIWP +VAPFK+SLIN+ HD Sbjct: 289 LINDEHGKLTPVEMSSYGIGISRLVAAIIEANCNEKGIIWPSNVAPFKVSLINLNIHDSK 348 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C + K+Y LS +V +DD + GS+FA DL+G P Q+I+G K +D VE+K+ Sbjct: 349 CVELAAKVYKELSAQNIEVLYDDTEARAGSKFATHDLIGSPYQIIIGPKKAADDIVELKN 408 Query: 421 RLTGIREDMSLEEVINYAS 439 R G+ ED+ +E +I+Y Sbjct: 409 RKIGVIEDIEVENLIHYIK 427 >gi|15604249|ref|NP_220765.1| prolyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E] gi|6226191|sp|Q9ZDE7|SYP_RICPR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|3860941|emb|CAA14841.1| PROLYL-TRNA SYNTHETASE (proS) [Rickettsia prowazekii] gi|292571991|gb|ADE29906.1| Prolyl-tRNA synthetase [Rickettsia prowazekii Rp22] Length = 432 Score = 359 bits (920), Expect = 7e-97, Method: Composition-based stats. Identities = 213/440 (48%), Positives = 299/440 (67%), Gaps = 12/440 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SKYFLPIL+E P +A++ SHKLMLR+GMI + + G+Y+WLPLG K L N+ ++R Sbjct: 1 MLLSKYFLPILKEEPSEAKVISHKLMLRSGMIMKQAAGLYTWLPLGLKVLKNIENVVRSN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A LW+ESGR++ YGKEML+ DR+D +++GPT+E+++TDIFR Sbjct: 61 MNKVGALEVLMPCIQPAHLWIESGRFEHYGKEMLKFQDRHDNTLLFGPTNEDMITDIFRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ + + ++YNKM+ + Sbjct: 121 NIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINQKNAVNTYNKMYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ F LG+ +IP+ A++GPIGG+LSHEF ++A+TGE+ ++ K F Sbjct: 181 YMNTFRDLGVFAIPVIADNGPIGGNLSHEFHIVAETGESTIYYDKRFKILKDN------- 233 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + VE+ YAA + H+ S PE ++GIEVGHIFY G+KYS+ M+A Sbjct: 234 ----PDIDVEEIKGWYAAAEEKHDVNKLSSFPEG-ITRSKGIEVGHIFYIGSKYSVNMNA 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 GK V+M SYGIG R+ AA+IE++ D KGIIWP SVAPFK+SLIN+ HD Sbjct: 289 LINDEYGKLIPVEMSSYGIGISRLAAAIIEANCDKKGIIWPCSVAPFKVSLINLNIHDNK 348 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C + K LS +V +DD + GS+FA DL+G P Q+I+G K +++ VE+K Sbjct: 349 CVELAAKTDKELSHQNIEVLYDDTDARPGSKFATHDLIGSPYQIIIGPKKAANNIVELKD 408 Query: 421 RLTGIREDMSLEEVINYASH 440 R TG+ ED+ +E +INY + Sbjct: 409 RKTGVLEDIEVENIINYIKN 428 >gi|51473574|ref|YP_067331.1| prolyl-tRNA synthetase [Rickettsia typhi str. Wilmington] gi|81826313|sp|Q68WZ3|SYP_RICTY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|51459886|gb|AAU03849.1| Proline translase [Rickettsia typhi str. Wilmington] Length = 428 Score = 357 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 217/439 (49%), Positives = 300/439 (68%), Gaps = 12/439 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SKYFLPIL+E P +A++ SHKLMLR+GMI + + G+Y+WLPLG K L N+ I+R Sbjct: 1 MLLSKYFLPILKEEPSEAQVISHKLMLRSGMIMKQASGLYTWLPLGLKVLKNIENIVRSN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A LW+ESGR++ YGKEML+ DR+D +++GPT+E+++TDIFR Sbjct: 61 MNKVGALEVLMPCIQPAHLWIESGRFEYYGKEMLKFQDRHDNTLLFGPTNEDMITDIFRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ E + ++YNKM+ + Sbjct: 121 NIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINQENAVNTYNKMYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ F LG+ +IP+ A++GPIGG+LSHEF ++A+TGE+ ++ K F Sbjct: 181 YINTFRDLGVFAIPVIADNGPIGGNLSHEFHIIAETGESTIYYDKRFKILKDN------- 233 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + VE+ + YAA + H+ S PE S++GIEVGHIFY G+KYS+ M+A Sbjct: 234 ----PDIDVEEIKSWYAAAEEKHDVNKLSSFPEG-ITSSKGIEVGHIFYIGSKYSVNMNA 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 GK V+M SYGIG R+ AA+IE++ D KGIIWP SVAPFK+SLIN+ HD Sbjct: 289 LINDEYGKLIPVEMSSYGIGISRLAAAIIEANCDKKGIIWPFSVAPFKVSLINLNIHDNK 348 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C + K LS +V +DD + GS+FA DL+G P QVI+G K +++ VE+K Sbjct: 349 CVELAAKTDKELSNKNIEVLYDDTEARPGSKFATHDLIGSPYQVIIGPKKAANNIVELKD 408 Query: 421 RLTGIREDMSLEEVINYAS 439 R TG+ ED+ +E +INY Sbjct: 409 RKTGVLEDIEIENLINYIR 427 >gi|262277283|ref|ZP_06055076.1| prolyl-tRNA synthetase [alpha proteobacterium HIMB114] gi|262224386|gb|EEY74845.1| prolyl-tRNA synthetase [alpha proteobacterium HIMB114] Length = 442 Score = 357 bits (915), Expect = 3e-96, Method: Composition-based stats. Identities = 220/447 (49%), Positives = 308/447 (68%), Gaps = 6/447 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S YFLPIL+ENP +A+I SH+LMLR GMI Q + GIYSWLP+G K L N+ I+REE Sbjct: 1 MKLSNYFLPILKENPSEAKIKSHQLMLRAGMIRQSASGIYSWLPMGFKVLKNIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QN+ GAIE+ +PT+QSAD+W ESGRYD YGKEMLR++DR+++ ++YGPT+EE++T IFR Sbjct: 61 QNKAGAIELLMPTIQSADIWKESGRYDDYGKEMLRISDRHERDLLYGPTNEELITQIFRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+NLP Y IQ KFRDE+RPRFGVMR REFLMKD YSFD+ ++ SY KMF+S Sbjct: 121 NIKSYKNLPLMLYHIQWKFRDEIRPRFGVMRCREFLMKDTYSFDVDKATAEFSYKKMFLS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+ F + L +IPM+AE+GPIGGDLSHEFI+LADTGE++VF K+ +D + + Sbjct: 181 YLKTFQKFELNAIPMKAETGPIGGDLSHEFIILADTGESEVFLDKNLLDIDVNEVD---Y 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFD-SLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++N I+E+++ Y+AT + H+ F+ ++ + ++ +GIE+GHIFYFG KYS M Sbjct: 238 SEKNINEIIERFSKFYSATDEKHDVNEFENNVSKENQLRTKGIEIGHIFYFGDKYSKSMK 297 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A +GK+ QMGSYGIG R+ AA+IE+ ++G + WP +V PFK+++IN+ + Sbjct: 298 ALVNNKEGKNINPQMGSYGIGVSRLPAAIIEAKYNGTFMKWPKTVTPFKVAIINLGKNGD 357 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +IY L D DD E S+F DL+G P Q+I+GSK + + E K Sbjct: 358 EADQKSNEIYQNLINANLDPILDDTSENPSSKFKNFDLIGIPYQIIIGSK-LKKDEFEFK 416 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + + +S EEVIN ++ ++ Sbjct: 417 E-IGEEKLILSKEEVINRLKEIYNIDK 442 >gi|225631202|ref|ZP_03787900.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591110|gb|EEH12294.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 422 Score = 356 bits (914), Expect = 4e-96, Method: Composition-based stats. Identities = 214/441 (48%), Positives = 299/441 (67%), Gaps = 19/441 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY+LP L+E P A+I SH+ LR G+I Q + GIY+WLPLG L N+ IIR+E Sbjct: 1 MRLSKYYLPTLKEKPAHAKIISHQYSLRAGLIKQIASGIYTWLPLGLLVLKNIEDIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GAIE +P +Q A LW ESGRYD YGKEMLR+ DR+++ M++GPTHEE+ TD+ R Sbjct: 61 MNKSGAIEALMPCVQPASLWRESGRYDDYGKEMLRIKDRHEEDMLFGPTHEEIATDLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP YQIQ KFRDE+RPR+GVMR REFLMKDAYSFD+ EG+ +SYN M+ + Sbjct: 121 VVKSYKDLPLCLYQIQWKFRDEVRPRYGVMRGREFLMKDAYSFDVDYEGALNSYNLMYKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF R+G I +RA++GPIGG+LSHEF +LA+TGE+ ++ F + + Sbjct: 181 YIKIFKRMGFTPIGVRADTGPIGGNLSHEFHILANTGESTLYYDNKFSELLESED----- 235 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 +E + YA D+H+ + + + + ++GIE+GHIFYFG KYS PM A Sbjct: 236 --------IESLKSIYAVADDMHDPE-TCPISQEQLNVSKGIEIGHIFYFGDKYSKPMKA 286 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + DGK+ + MGSYGIG R+V A+IE+ HD KGIIWP+SVAPF+I LIN++ Sbjct: 287 SVTSQDGKNVNIHMGSYGIGVSRLVGAIIEAFHDDKGIIWPESVAPFRIGLINLQPK--- 343 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 +A +KIY L +V +DD +G +F+ DL+G P Q+IVG K + + VE+K+ Sbjct: 344 VTEAADKIYKALKSD--EVLYDDTEGSVGVKFSRMDLIGLPWQIIVGKKAIDEKIVEVKN 401 Query: 421 RLTGIREDMSLEEVINYASHR 441 R TG ++M +EE +N+ S + Sbjct: 402 RATGEVKEMPIEEAVNHFSTK 422 >gi|254453587|ref|ZP_05067024.1| prolyl-tRNA synthetase [Octadecabacter antarcticus 238] gi|198267993|gb|EDY92263.1| prolyl-tRNA synthetase [Octadecabacter antarcticus 238] Length = 428 Score = 355 bits (912), Expect = 6e-96, Method: Composition-based stats. Identities = 214/418 (51%), Positives = 289/418 (69%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 MLR GMI Q S GIYSWLPLG K L + I+ EEQ R G I + +PT+QSADLW ESGR Sbjct: 1 MLRAGMIKQSSAGIYSWLPLGFKVLKRIEQIVHEEQERAGHIAIQMPTIQSADLWRESGR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 Y++YG EMLR+ DRN +++ PT EE++TDIFRSH+ SY++LP T YQIQ KFRDE RP Sbjct: 61 YEAYGDEMLRIKDRNGNDLLFTPTAEELVTDIFRSHVASYKSLPMTLYQIQWKFRDERRP 120 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 RFGVMR REF MKD Y+FDLT E + H+YN+ VSYLR + R+GL++IPMRA SGPIGGD Sbjct: 121 RFGVMRGREFYMKDGYTFDLTKEDAMHAYNRHLVSYLRTYERMGLQAIPMRAASGPIGGD 180 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 +HEF+VLADTGE++VF + + D+DD+ ++E++T YA T + H+ Sbjct: 181 DTHEFLVLADTGESEVFYDAAVTELSFGNREIDYDDVAQCADVMEEFTTKYARTDETHDP 240 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 LFD++P +++ +ARGIEVG IFYFGTKYS M AT +G DGK V MGS+GIG R++ Sbjct: 241 ALFDAIPADRQRTARGIEVGQIFYFGTKYSDAMGATVQGPDGKPTAVHMGSHGIGVSRLL 300 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 A+IE+SHD KGIIWP+ V PF + ++N+K D AC+ +Y ++ +G + +DD Sbjct: 301 GAIIEASHDDKGIIWPEGVTPFHVGIVNLKQGDADADAACQSLYDAVAALGLEALYDDRD 360 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 E+ GS+F D++G P ++ VG + + + VE+ R TG E+M E+ I + Sbjct: 361 ERAGSKFGTMDMIGLPWRITVGPRGLKNGVVELTSRKTGESEEMPPEQAIAKIGEIYR 418 >gi|58698845|ref|ZP_00373719.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] gi|225630527|ref|YP_002727318.1| prolyl-tRNA synthetase [Wolbachia sp. wRi] gi|254782927|sp|C0R3N5|SYP_WOLWR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|58534643|gb|EAL58768.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] gi|225592508|gb|ACN95527.1| prolyl-tRNA synthetase [Wolbachia sp. wRi] Length = 422 Score = 355 bits (912), Expect = 7e-96, Method: Composition-based stats. Identities = 218/441 (49%), Positives = 302/441 (68%), Gaps = 19/441 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY+LP L+E P A+I SH+ LR G+I Q + GIYSWLPLG L N+ IIR+E Sbjct: 1 MRLSKYYLPTLKEKPAHAKIISHQYSLRAGLIKQIASGIYSWLPLGLLVLKNIEDIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +++GAIE+ +P +Q A+LW ESGRYD YGKEMLR+ DR+++ M++GPTHEEV TD+ R Sbjct: 61 MDKSGAIEVLMPCVQPANLWRESGRYDDYGKEMLRIKDRHEEDMLFGPTHEEVATDLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP YQIQ KFRDE+RPR+GVMR REFLMKDAYSFD+ EG+ +SYN M+ + Sbjct: 121 VVKSYKDLPLCLYQIQWKFRDEVRPRYGVMRGREFLMKDAYSFDVDYEGALNSYNLMYKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF R+GL I +RA++GPIGG+LSHEF +LA+TGE+ ++ F + + Sbjct: 181 YIKIFKRMGLTPIGVRADTGPIGGNLSHEFHILANTGESTLYYDNKFSELLESED----- 235 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 VE + YA D+H+ + + + + ++GIE+GHIFYFG KYS PM A Sbjct: 236 --------VESLKSIYAVADDMHDPE-TCPISQEQLNVSKGIEIGHIFYFGDKYSKPMKA 286 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + DGK+ + MGSYGIG R+V A+IE+ HD KGIIWP+SVAPF+I LIN++ Sbjct: 287 SVTSQDGKNVNIHMGSYGIGVSRLVGAIIEAFHDDKGIIWPESVAPFRIGLINLQTK--- 343 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 +A +KIY L +V +DD +G +F+ DL+G P Q+IVG K + + VE+K+ Sbjct: 344 VTEAADKIYKALKSD--EVLYDDTEGSVGVKFSRMDLIGLPWQIIVGKKAIDEKIVEVKN 401 Query: 421 RLTGIREDMSLEEVINYASHR 441 R TG ++M +EE IN+ S + Sbjct: 402 RATGEVKEMQIEEAINHFSTK 422 >gi|42520651|ref|NP_966566.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila melanogaster] gi|81831258|sp|Q73GW6|SYP_WOLPM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|42410390|gb|AAS14500.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila melanogaster] Length = 422 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 215/441 (48%), Positives = 299/441 (67%), Gaps = 19/441 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY+LP L+E P A+I SH+ LR G+I Q + GIY+WLPLG L N+ IIR+E Sbjct: 1 MRLSKYYLPTLKEKPAHAKIISHQYSLRAGLIKQIASGIYTWLPLGLLVLKNIEDIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GAIE +P +Q A LW ESGRYD YGKEMLR+ DR+++ M++GPTHEE+ TD+ R Sbjct: 61 MNKSGAIEALMPCVQPASLWRESGRYDDYGKEMLRIKDRHEEDMLFGPTHEEIATDLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP YQIQ KFRDE+RPR+GVMR REFLMKDAYSFD+ EG+ +SYN M+ + Sbjct: 121 VVKSYKDLPLCLYQIQWKFRDEVRPRYGVMRGREFLMKDAYSFDVDYEGALNSYNLMYKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF R+G I + A++GPIGG+LSHEF +LA+TGE+ ++ F + + Sbjct: 181 YIKIFKRMGFTPIGVGADTGPIGGNLSHEFHILANTGESTLYYDNKFSELLESED----- 235 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 +E + YA D+H+ + + + + ++GIE+GHIFYFG KYS PM A Sbjct: 236 --------IESLKSIYAVADDMHDPE-TCPISQEQLNVSKGIEIGHIFYFGDKYSKPMKA 286 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + DGK+ + MGSYGIG R+V A+IE+ HD KGIIWP+ VAPF+I LIN++ Sbjct: 287 SVTSQDGKNVNIHMGSYGIGVSRLVGAIIEAFHDDKGIIWPEEVAPFRIGLINLQTK--- 343 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 +A +KIY L +V +DD +G +F+ DL+G P Q+IVG K VS++ VE+K+ Sbjct: 344 VTEAADKIYKALKSD--EVLYDDTEGSVGVKFSRMDLIGLPWQIIVGKKAVSENIVEVKN 401 Query: 421 RLTGIREDMSLEEVINYASHR 441 R TG ++M +EE IN+ S + Sbjct: 402 RATGEVKEMQIEEAINHFSAK 422 >gi|157825653|ref|YP_001493373.1| prolyl-tRNA synthetase [Rickettsia akari str. Hartford] gi|166980149|sp|A8GN90|SYP_RICAH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157799611|gb|ABV74865.1| prolyl-tRNA synthetase [Rickettsia akari str. Hartford] Length = 427 Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats. Identities = 212/439 (48%), Positives = 298/439 (67%), Gaps = 12/439 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M S+YFLP+L+E P +A++ SHKLMLR+GMI Q + GIY+WLPLG K L N+ I+ Sbjct: 1 MLLSQYFLPVLKEEPSEAQVTSHKLMLRSGMIRQQAAGIYTWLPLGLKVLKNIENIVSLN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A LW+ESGR+++YGKEML+ DR+D +++GPT+E+++TDIFR Sbjct: 61 MNKAGALEVLMPCIQPAHLWMESGRFNNYGKEMLKFQDRHDNTLLFGPTNEDMITDIFRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ E + +YN+M+ + Sbjct: 121 NIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINEENAVKTYNQMYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ F LG+ +IP+ A++GPIGG LSHEF ++A+TGE+ ++ K F Sbjct: 181 YINTFRDLGVFAIPVIADNGPIGGKLSHEFHIIAETGESTIYYDKRFKTLKDN------- 233 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + V++ + YAA + H+ + E + S++GIEVGHIFY G+KYS+ M A Sbjct: 234 ----PDIDVDEIKSWYAAAEEKHDINKL-PISEQEITSSKGIEVGHIFYIGSKYSVNMKA 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 GK V+M SYGIG R+VAA+IE++ D KGIIWP SVAPFK+SLIN+ HD Sbjct: 289 LINDEHGKLAPVEMSSYGIGISRLVAAIIEANCDEKGIIWPFSVAPFKVSLINLNIHDSK 348 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C + K Y LS +V +DD + GS+FA DL+G P Q+I+G K +++ VE+K Sbjct: 349 CVELAAKAYKDLSDKNIEVLYDDTEARPGSKFATHDLIGSPHQIIIGPKKAANNIVELKD 408 Query: 421 RLTGIREDMSLEEVINYAS 439 R +G ED+ +E +INY Sbjct: 409 RKSGNIEDIEVENLINYIK 427 >gi|239947222|ref|ZP_04698975.1| prolyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes scapularis] gi|241068545|ref|XP_002408465.1| tRNA synthetases class II, putative [Ixodes scapularis] gi|215492453|gb|EEC02094.1| tRNA synthetases class II, putative [Ixodes scapularis] gi|239921498|gb|EER21522.1| prolyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes scapularis] Length = 426 Score = 352 bits (904), Expect = 6e-95, Method: Composition-based stats. Identities = 213/438 (48%), Positives = 301/438 (68%), Gaps = 12/438 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SKYFLP+L+E P +A++ SHKLM R+GMI Q + GIY+WLPLG K L N+ I+R Sbjct: 1 MLLSKYFLPVLKEEPSEAQVTSHKLMFRSGMIRQQAAGIYTWLPLGLKLLKNIENIVRLN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A LW+ESGR+D+YGKEML+ DR+D +++GPT+E+++TDIFR Sbjct: 61 MNKAGALEVLMPCIQPAHLWMESGRFDNYGKEMLKFQDRHDNTLLFGPTNEDMITDIFRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ E + +YN+M+ + Sbjct: 121 NIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINEENAVKTYNQMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ F LG+ +IP+ A++GPIGG+LSHEF ++A+TGE+ ++ K F S Sbjct: 181 YINTFRDLGVFAIPVIADNGPIGGNLSHEFHIIAETGESTIYYDKRFKTLKDNS------ 234 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + VE+ + YAA + H+ + E + S++GIEVGHIFY G+KYS+ M+A Sbjct: 235 -----DIDVEEIKSWYAAAEEKHDVNKL-PISEQEITSSKGIEVGHIFYIGSKYSVNMNA 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 GK V+M SYGIG R+VAA+IE++ D KGIIWP SVAPFK+SLIN+ HD Sbjct: 289 LINDEHGKLTPVEMSSYGIGISRLVAAIIEANCDEKGIIWPSSVAPFKVSLINLNIHDSK 348 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C + K Y LS +V +DD + GS+FA DL+G P Q+I+G K +D+ VE+K+ Sbjct: 349 CVELAAKAYKELSAQNIEVLYDDTEARAGSKFATHDLIGSPYQIIIGPKKAADNIVELKN 408 Query: 421 RLTGIREDMSLEEVINYA 438 R +G+ ED+ + +++ Sbjct: 409 RKSGVIEDIEIGSLMSIL 426 >gi|330814001|ref|YP_004358240.1| prolyl-tRNA synthetase Bacterial type [Candidatus Pelagibacter sp. IMCC9063] gi|327487096|gb|AEA81501.1| prolyl-tRNA synthetase Bacterial type [Candidatus Pelagibacter sp. IMCC9063] Length = 441 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 222/442 (50%), Positives = 302/442 (68%), Gaps = 7/442 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S +FLPIL++ P DA I SH+LMLR+GMI Q + GIYSWLPLG K L + +I+R+E Sbjct: 1 MKLSNFFLPILRDVPSDATIKSHQLMLRSGMIRQSASGIYSWLPLGFKVLKKIESIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QN+ GA EM +PT+QSADLW ESGRYD YG EMLR+ DR D+ ++YGPT+EE++T IFR Sbjct: 61 QNKAGAQEMLMPTIQSADLWKESGRYDGYGLEMLRIRDRQDRELLYGPTNEELITQIFRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++K+Y++LP Y IQ KFRDE+RPRFG+MR REFLMKD+YSFD EG+ SYNKMF + Sbjct: 121 NVKTYKSLPLILYHIQWKFRDEIRPRFGIMRCREFLMKDSYSFDENKEGAIISYNKMFCA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+ F RLGL++IPM A++GPIGGDLSHEFI+LADTGE+Q+F SK +D I + Sbjct: 181 YLKTFERLGLRAIPMAADTGPIGGDLSHEFIILADTGESQIFTSKKILDLKISDFK---N 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK-RVSARGIEVGHIFYFGTKYSLPMS 299 D SL +V+ +T Y+AT + N+ FD E K ++ RGIEVGHIFYFG KYS PM Sbjct: 238 DSESLAKMVKSYTDIYSATDEKFNQSDFDKSVEKKDQLVTRGIEVGHIFYFGDKYSKPMK 297 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-D 358 A ++GK+ ++MGSYGIG R+ A+IE+++ + WP SV PF +++I + D Sbjct: 298 ALVNSSEGKNITIEMGSYGIGVSRLAGAIIEANYKDNVMKWPASVTPFHVAVIYLGKKND 357 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + + +Y +L +V DD E S+F DL+G P Q+I+G+K S + E Sbjct: 358 ETLKKKTSDVYEKLLNNSFEVLLDDTDESPASKFKNFDLIGIPYQIIIGAK-QSGDEFEF 416 Query: 419 KHRLTGIREDMSLEEVINYASH 440 K +E ++L+ +IN Sbjct: 417 KELGE-EKEIINLDIIINKLKK 437 >gi|157828402|ref|YP_001494644.1| prolyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933112|ref|YP_001649901.1| prolyl-tRNA synthetase [Rickettsia rickettsii str. Iowa] gi|166980152|sp|A8GRW1|SYP_RICRS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|189083508|sp|B0BXB9|SYP_RICRO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157800883|gb|ABV76136.1| prolyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908199|gb|ABY72495.1| prolyl-tRNA synthetase [Rickettsia rickettsii str. Iowa] Length = 426 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 208/438 (47%), Positives = 299/438 (68%), Gaps = 12/438 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SKYFLP+L+E P +A++ SHKLMLR+GMI Q + GIY+WLPLG K L N+ I+R Sbjct: 1 MLLSKYFLPVLKEEPSEAQVTSHKLMLRSGMIRQQAAGIYTWLPLGLKVLKNIENIVRLN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A LW+ESGR+D+YGKEML+ DR+D +++GPT+E+++TDIFR Sbjct: 61 MNKAGALEVLMPCIQPAHLWMESGRFDNYGKEMLKFQDRHDNTLLFGPTNEDMITDIFRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ E + +YN+M+ + Sbjct: 121 NIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINEENAVKTYNQMYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ F LG+ +IP+ A++GPIGG+LSHEF ++A+TGE+ ++ + Sbjct: 181 YINAFRDLGVFAIPVIADNGPIGGNLSHEFHIIAETGESTIYY-----------DKKFKI 229 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + VE+ + YAA + + + E + S++GIEVGHIFY G+KYS+ M+A Sbjct: 230 LKDNPDIDVEEIKSWYAAAEEKYEVNKL-PISEQEITSSKGIEVGHIFYIGSKYSVNMNA 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 GK ++M SYGIG R+VAA+IE++ D KGIIWP SVAPFK+SLIN+ HD Sbjct: 289 LINDEYGKLTPIEMSSYGIGISRLVAAIIEANCDEKGIIWPSSVAPFKVSLINLNIHDSK 348 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C + E Y LS +V +DD + GS+FA DL+G P Q+I+G K +++ VE+K Sbjct: 349 CVELAEMAYKELSDKNIEVLYDDTEARPGSKFATHDLIGSPHQIIIGPKKAANNIVELKD 408 Query: 421 RLTGIREDMSLEEVINYA 438 R +G+ ED+ + +++ Sbjct: 409 RKSGVIEDIEVGSLMSVL 426 >gi|15892451|ref|NP_360165.1| prolyl-tRNA synthetase [Rickettsia conorii str. Malish 7] gi|229586653|ref|YP_002845154.1| prolyl-tRNA synthetase [Rickettsia africae ESF-5] gi|81854111|sp|Q92I92|SYP_RICCN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|259511616|sp|C3PNA1|SYP_RICAE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|15619605|gb|AAL03066.1| prolyl-tRNA synthetase [Rickettsia conorii str. Malish 7] gi|228021703|gb|ACP53411.1| Prolyl-tRNA synthetase [Rickettsia africae ESF-5] Length = 426 Score = 350 bits (897), Expect = 4e-94, Method: Composition-based stats. Identities = 210/438 (47%), Positives = 298/438 (68%), Gaps = 12/438 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SKYFLP+L+E P +A++ SHKLMLR+GMI Q + GIY+WLPLG K L N+ I+R Sbjct: 1 MLLSKYFLPVLKEEPSEAQVTSHKLMLRSGMIRQQAAGIYTWLPLGLKVLKNIENIVRLN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A LW+ESGR+D+YGKEML+ DR+D +++GPT+E+++TDIFR Sbjct: 61 MNKAGALEVLMPCIQPAHLWMESGRFDNYGKEMLKFQDRHDNTLLFGPTNEDMITDIFRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ E + +YN+M+ + Sbjct: 121 NIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINEENAVKTYNQMYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ F LG+ IP+ A++GPIGG+LSHEF ++A+TGE+ ++ K F Sbjct: 181 YINAFRDLGVFVIPVIADNGPIGGNLSHEFHIIAETGESTIYYDKKFKTLKDN------- 233 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + VE+ + YAA + + + E + S++GIEVGHIFY G+KYS+ M+A Sbjct: 234 ----PDIDVEEIKSWYAAAEEKYEVNKL-PISEQEITSSKGIEVGHIFYIGSKYSVNMNA 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 GK ++M SYGIG R+VAA+IE++ D KGIIWP SVAPFK+SLIN+ HD Sbjct: 289 LINDEYGKLTPIEMSSYGIGISRLVAAIIEANCDEKGIIWPSSVAPFKVSLINLNIHDSK 348 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C + E Y LS +V +DD + GS+FA DL+G P Q+I+G K +++ VE+K Sbjct: 349 CVELAEMAYKELSDKNIEVLYDDTEARPGSKFATHDLIGSPHQIIIGPKKAANNIVELKD 408 Query: 421 RLTGIREDMSLEEVINYA 438 R +G+ ED+ + +++ Sbjct: 409 RKSGVIEDIEVGSLMSVL 426 >gi|238650930|ref|YP_002916786.1| prolyl-tRNA synthetase [Rickettsia peacockii str. Rustic] gi|259511617|sp|C4K2D7|SYP_RICPU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|238625028|gb|ACR47734.1| prolyl-tRNA synthetase [Rickettsia peacockii str. Rustic] Length = 426 Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats. Identities = 209/438 (47%), Positives = 298/438 (68%), Gaps = 12/438 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SKYFLP+L+E P +A++ SHKLMLR+GMI Q + GIY+WLPLG K L N+ I+R Sbjct: 1 MLLSKYFLPVLKEEPSEAQVTSHKLMLRSGMIRQQAAGIYTWLPLGLKVLKNIENIVRLN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A LW+ESGR+D+YGKEML+ DR+D +++GPT+E+++TDIFR Sbjct: 61 MNKAGALEVLMPCIQPAHLWMESGRFDNYGKEMLKFQDRHDNTLLFGPTNEDMITDIFRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ E + +YN+M+ + Sbjct: 121 NIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINEENAVKTYNQMYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ F LG+ +IP+ A++GPIGG+LSHEF ++A+TGE+ ++ K F Sbjct: 181 YINAFRDLGVFAIPVIADNGPIGGNLSHEFHIIAETGESTIYYDKKFKTLKDN------- 233 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + VE+ + YAA + + + E + S++GIEVGHIFY G+KYS+ M+A Sbjct: 234 ----PDIDVEEIKSWYAAAEEKYEVNKL-PISEQEITSSKGIEVGHIFYIGSKYSVNMNA 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 GK ++M SYGIG R+VAA+IE++ D KGIIWP SVAPFK+SLIN+ HD Sbjct: 289 LINDEYGKLTPIEMSSYGIGISRLVAAIIEANCDEKGIIWPSSVAPFKVSLINLNIHDSK 348 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C + E Y LS +V +DD + GS+FA DL+G P Q+I+G K +++ V +K Sbjct: 349 CVELAEMAYKELSDKNIEVLYDDTEARPGSKFATHDLIGSPHQIIIGPKKAANNIVALKD 408 Query: 421 RLTGIREDMSLEEVINYA 438 R +G+ ED+ + +++ Sbjct: 409 RKSGVIEDIEVGSLMSVL 426 >gi|118595268|ref|ZP_01552615.1| prolyl-tRNA synthetase [Methylophilales bacterium HTCC2181] gi|118441046|gb|EAV47673.1| prolyl-tRNA synthetase [Methylophilales bacterium HTCC2181] Length = 411 Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats. Identities = 181/441 (41%), Positives = 265/441 (60%), Gaps = 32/441 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK+++ +E P +AE+ SHKLM+R G+I + G+Y+W+P+G + L + IREE Sbjct: 1 MKASKFYISTFKEAPAEAELTSHKLMIRAGLIKKLGSGLYTWMPMGLRVLKKIENTIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW E+GR++ +G +ML+++DR+D+ +GPTHEEV+TD+ R+ Sbjct: 61 MQQAGAVELLMPAIQPAELWEETGRWELFGPQMLKISDRHDRPFCFGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ+KFRDE+RPRFGVMR+REFLMKDAYSF E KH+Y+ MF + Sbjct: 121 ELNSYKQLPMNFYQIQMKFRDEIRPRFGVMRAREFLMKDAYSFHADIESLKHTYDLMFKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF +LGL ++A++G IGGD SHEF VLAD+GE ++ + DF E Sbjct: 181 YNAIFTKLGLIFRAVQADNGAIGGDGSHEFHVLADSGEDEIVYDEH-SDFAANIE----- 234 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D + + RGIEVGHIF GTKYS M A Sbjct: 235 -------------------------VAKDHPDKRNLKTCRGIEVGHIFQLGTKYSEAMKA 269 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQ 359 TF GK + MG YGIG R++AA IE +HD KGII+P+S+APF++ + I Sbjct: 270 TFINQSGKPSPMIMGCYGIGVSRIIAAAIEQNHDDKGIIFPESMAPFEVIITPIGYDKSS 329 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ++ + +Y L G DV DD G + G F+ A+L+G P ++ V + ++K E K Sbjct: 330 SVKEGVDDLYQLLIAEGYDVLLDDRGLRPGIMFSEAELIGIPHRITVSETTLKENKYEYK 389 Query: 420 HRLTGIREDMSLEEVINYASH 440 +R E ++ ++I + Sbjct: 390 NRSKTDAEMIASNDLIRHLKS 410 >gi|157964462|ref|YP_001499286.1| prolyl-tRNA synthetase [Rickettsia massiliae MTU5] gi|157844238|gb|ABV84739.1| Prolyl-tRNA synthetase [Rickettsia massiliae MTU5] Length = 437 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 210/431 (48%), Positives = 295/431 (68%), Gaps = 12/431 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SKYFLP+L+E P +A++ SHKLMLR+GMI Q + GIY+WLPLG K L N+ I+R Sbjct: 10 MLLSKYFLPVLKEEPSEAQVTSHKLMLRSGMIRQQAAGIYTWLPLGLKVLKNIENIVRLN 69 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A LW+ESGR+D+YGKEML+ DR+D +++ PT+E+++TDIFR Sbjct: 70 MNKAGALEILMPCIQPAHLWMESGRFDNYGKEMLKFQDRHDNTLLFSPTNEDMITDIFRH 129 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ E + +YN+M+ + Sbjct: 130 NIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINEENAVKTYNQMYKA 189 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ F LG+ +IP+ A++GPIGG+LSHEF ++A+TGE+ ++ K F Sbjct: 190 YINAFRDLGVFAIPVIADNGPIGGNLSHEFHIIAETGESTIYYDKKFKTLKDN------- 242 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + VE+ + YAA + H + E + S++GIEVGHIFY G+KYS+ M+A Sbjct: 243 ----PDIDVEEIKSWYAAAEEKHEVNKL-PISEQEITSSKGIEVGHIFYIGSKYSVNMNA 297 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 GK ++M SYGIG R+VAA+IE++ D KGIIWP SVAPFK+SLIN+ HD Sbjct: 298 LINDEHGKLTPIEMSSYGIGISRLVAAIIEANCDEKGIIWPSSVAPFKVSLINLNIHDSK 357 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C + E Y LS +V +DD + GS+FA DL+G P Q+I+G K +++ VE+K Sbjct: 358 CVELAEMAYKELSDKNIEVLYDDTEARPGSKFATHDLIGSPHQIIIGPKKAANNIVELKD 417 Query: 421 RLTGIREDMSL 431 R +G+ ED+ + Sbjct: 418 RKSGVIEDIEV 428 >gi|73666953|ref|YP_302969.1| prolyl-tRNA synthetase [Ehrlichia canis str. Jake] gi|114152194|sp|Q3YSD4|SYP_EHRCJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|72394094|gb|AAZ68371.1| Prolyl-tRNA synthetase [Ehrlichia canis str. Jake] Length = 424 Score = 346 bits (888), Expect = 4e-93, Method: Composition-based stats. Identities = 200/440 (45%), Positives = 284/440 (64%), Gaps = 16/440 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y++P L+E D + SHK +R G+I Q + GIY+WLPLG + L N+ I+REE Sbjct: 1 MRLSNYYIPTLKETSADVSVVSHKYSIRAGLIKQIASGIYTWLPLGLRVLRNIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GA+E+ +P +Q A LW ESGRYD YG EMLR+ DRN + M++GPTHEEV+TD R+ Sbjct: 61 MNKSGALEVLMPLIQPASLWKESGRYDDYGSEMLRITDRNQREMLFGPTHEEVITDTLRT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + S++NLP T YQIQ KFRDELRPR+G+MR REFLMKDAYSFD G+ SYN MF + Sbjct: 121 TLTSHKNLPITLYQIQWKFRDELRPRYGIMRCREFLMKDAYSFDKDLSGAILSYNLMFKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF LGL I ++AESGPIGG+LSHEF VLA++GE+ ++ ++ ++ Sbjct: 181 YIKIFKNLGLTPIAVKAESGPIGGNLSHEFHVLANSGESTLYYDQEIIEL---------- 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + S N +E+ Y A D+H+ + +P N +++GIE+GHIFY G KYS PM+A Sbjct: 231 -MNSDNIDIERIKNTYTAADDMHDPQ-TCPIPPNNIKTSKGIEIGHIFYLGDKYSKPMNA 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 F + +QMG YGIG R+VAA+IE HD KGI WP+ ++PFK SL+N+ + + Sbjct: 289 NFCD-NNDSKPLQMGCYGIGISRLVAAIIEVFHDNKGITWPEEISPFKFSLVNLYSSNDK 347 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C E ++ +L DV +DD + G + DLLG P Q+I+G V +E+++ Sbjct: 348 CIKVAENLHMQLHN---DVLYDDTDDSPGIKLTRTDLLGMPWQIIIGKSTVEQDLIEVRN 404 Query: 421 RLTGIREDMSLEEVINYASH 440 R + +S+E+ + Sbjct: 405 RSNKDKFLISVEQFLKKFKK 424 >gi|209964526|ref|YP_002297441.1| prolyl-tRNA synthetase [Rhodospirillum centenum SW] gi|209957992|gb|ACI98628.1| prolyl-tRNA synthetase ProS [Rhodospirillum centenum SW] Length = 404 Score = 346 bits (887), Expect = 5e-93, Method: Composition-based stats. Identities = 222/408 (54%), Positives = 300/408 (73%), Gaps = 6/408 (1%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 MI Q S GIY+WLPLG + L V I+REEQ+R GA EM +PT+QSADLW +SGRY++YG Sbjct: 1 MIRQTSAGIYAWLPLGWRVLQKVAQIVREEQDRAGAQEMLMPTIQSADLWKQSGRYEAYG 60 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVM 150 KEMLR+ DR+D+ M+YGPT+EE++TDIF++ +KSY++LP Y IQ KFRDE+RPRFG+M Sbjct: 61 KEMLRITDRHDREMLYGPTNEEMITDIFKTFVKSYKDLPKNLYHIQWKFRDEIRPRFGLM 120 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R REFLMKD YSFDL EG+K SY +MF++YLR F R+G+K+IPMRA++GPIGGDLSHEF Sbjct: 121 RGREFLMKDNYSFDLDVEGAKLSYRRMFLAYLRTFARMGIKAIPMRADTGPIGGDLSHEF 180 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 I+LA+TGE+QVFC + +++ + +E D L +++T+ YAAT ++H+ + Sbjct: 181 IILAETGESQVFCDRRWLELDVLAEAPAPDS--DLKEFFDRYTSIYAATEEMHDAAKAPA 238 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 V+ARGIEVGHIFYFG KYS PM A G DG+ V+MGSYGIG RVVAA+IE Sbjct: 239 ----DLVTARGIEVGHIFYFGKKYSQPMEAIVAGPDGQPVTVEMGSYGIGVSRVVAAIIE 294 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 +SHD +GIIWP+ VAPFK++++N+K D C CE +YARLS +V +DD E+ G+ Sbjct: 295 ASHDEQGIIWPEPVAPFKLAIVNLKVDDAECSRVCEDLYARLSGAKVEVLYDDRNERPGA 354 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 +FA DL+G P Q+ VG + + VE+K R TG + ++S+E+ + Sbjct: 355 KFADMDLIGVPWQLTVGPRGLKAGVVELKRRATGEKFELSVEDALARV 402 >gi|34580554|ref|ZP_00142034.1| prolyl-tRNA synthetase [Rickettsia sibirica 246] gi|28261939|gb|EAA25443.1| prolyl-tRNA synthetase [Rickettsia sibirica 246] Length = 426 Score = 345 bits (884), Expect = 9e-93, Method: Composition-based stats. Identities = 207/438 (47%), Positives = 297/438 (67%), Gaps = 12/438 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SKYFLP+L+E P +A++ SHKLMLR+GMI Q + GIY+WLPLG K L N+ I+R Sbjct: 1 MLLSKYFLPVLKEEPSEAQVTSHKLMLRSGMIRQQAAGIYTWLPLGLKVLKNIEHIVRLN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A LW+ESGR+D+YGKEML+ DR+D +++GPT+E+++ DIFR Sbjct: 61 MNKAGALEVLMPCIQPAHLWMESGRFDNYGKEMLKFQDRHDNTLLFGPTNEDMIMDIFRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY++LP Y IQ KFRDE+RPRFGVMR REFLMKDAYSFD+ E + +YN+M+ + Sbjct: 121 NIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINEENAVKTYNQMYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ F LG+ IP+ A++GPIGG+LSHEF V+A+TGE+ ++ + Sbjct: 181 YINAFRDLGVFVIPVIADNGPIGGNLSHEFHVIAETGESTIYY-----------DKKFKI 229 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + VE+ + YAA + + + E + S++GIEVGHIFY G+KYS+ M+A Sbjct: 230 LKDNPDIDVEEIKSWYAAAEEKYEVNKL-PISEQEITSSKGIEVGHIFYIGSKYSVNMNA 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 GK ++M SYGIG R+VAA+IE++ D KGIIWP SVAPFK+SLIN+ HD Sbjct: 289 LINDEYGKLTPIEMSSYGIGISRLVAAIIEANCDEKGIIWPSSVAPFKVSLINLNIHDSK 348 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C + + Y LS +V +DD + GS+FA DL+G P Q+I+G K +++ VE+K Sbjct: 349 CVELADMAYKELSDKNIEVLYDDTEARPGSKFATHDLIGSPHQIIIGPKKAANNIVELKD 408 Query: 421 RLTGIREDMSLEEVINYA 438 R +G+ ED+ + +++ Sbjct: 409 RKSGVIEDIEVGSLMSVL 426 >gi|306841942|ref|ZP_07474620.1| prolyl-tRNA synthetase [Brucella sp. BO2] gi|306287975|gb|EFM59383.1| prolyl-tRNA synthetase [Brucella sp. BO2] Length = 400 Score = 339 bits (869), Expect = 7e-91, Method: Composition-based stats. Identities = 227/399 (56%), Positives = 301/399 (75%) Query: 43 LPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK 102 +P+G K L+ V IIREEQNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR ++ Sbjct: 1 MPIGLKVLNKVCTIIREEQNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQER 60 Query: 103 AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYS 162 M++GPT+EE++TDIFRS+++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYS Sbjct: 61 EMLFGPTNEEMVTDIFRSYVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYS 120 Query: 163 FDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 FDL EG+K +Y +MFVSYLR F R+GL++IPMRA++GPIGGDLSHEFI+LA+TGE+QV+ Sbjct: 121 FDLDYEGAKMAYYRMFVSYLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQVY 180 Query: 223 CSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 C + ++D +P +TDF + L IV +WT PYAAT ++H+E + + +VSARGI Sbjct: 181 CDRAYLDLAVPGADTDFRNDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGI 240 Query: 283 EVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 EVGHIF+FGTKYS PM A +G DGK+H V MGSYGIG R+VAA IE+SHD GI+WP Sbjct: 241 EVGHIFHFGTKYSEPMGAKVQGPDGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIVWPK 300 Query: 343 SVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPL 402 ++APF ++N+K D+ C EK+Y L+ G D DD E+ G++FA DL+G P Sbjct: 301 AIAPFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDERPGAKFATMDLIGLPT 360 Query: 403 QVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 QVIVG + V+ +VE+K R TG R+ + ++ IN + + Sbjct: 361 QVIVGPRGVAAGEVEVKDRKTGERQSLGIDAAINMLTAQ 399 >gi|57239072|ref|YP_180208.1| prolyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|58579015|ref|YP_197227.1| prolyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|81819260|sp|Q5HBI6|SYP_EHRRW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|57161151|emb|CAH58064.1| prolyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|58417641|emb|CAI26845.1| Prolyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] Length = 426 Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats. Identities = 203/440 (46%), Positives = 286/440 (65%), Gaps = 15/440 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY++P L+E P D + SH LR+G+I Q + GIY+WLPLG K L N+ +I+EE Sbjct: 1 MRLSKYYIPTLKETPADVSVTSHVYSLRSGLIRQVASGIYAWLPLGLKVLKNIENVIKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++G +E+ +P +Q A LW ESGRY+ YG EMLR+ DRN++ M++GPTHEEV+TD+ R+ Sbjct: 61 MNKSGILEVLMPLIQPASLWQESGRYNDYGSEMLRIKDRNNREMVFGPTHEEVVTDLLRT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+NLP YQ+Q KFRDELRPR+G+MR REFLMKDAYSFD + SYN MF Sbjct: 121 TLTSYKNLPLILYQVQWKFRDELRPRYGIMRCREFLMKDAYSFDKDFNSAIESYNLMFKV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF RLGL I ++A+SGPIGG+LSHEF +LA++GE+ ++ +D + Sbjct: 181 YIQIFRRLGLTPIAVKADSGPIGGNLSHEFHILANSGESTLYYDQDI-----------IN 229 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I + N +E+ Y A D+HN + +P + ++GIE+GHIFY G KYS M+A Sbjct: 230 LINNDNIDIEKIKNTYTAADDLHNSE-TCPIPASNIKKSKGIEIGHIFYLGDKYSKTMNA 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 F + + + MG YGIG R+V A+IE SHD GIIWP+ +APFK SL+N+ + ++ Sbjct: 289 VFS-QNNETQLLHMGCYGIGVSRLVGAIIEVSHDNNGIIWPEEIAPFKFSLVNVFSANKE 347 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C + E +YA+L DV +DD + G +FA DLLG P QVI+G + +E++ Sbjct: 348 CHNISENLYAKLGSN--DVLYDDTEDSTGIKFARMDLLGMPWQVIIGKTTIEHGLIEVRQ 405 Query: 421 RLTGIREDMSLEEVINYASH 440 R + MS E+ +N Sbjct: 406 RSSKKSLLMSTEQFLNNFKK 425 >gi|58617074|ref|YP_196273.1| prolyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel] gi|81311371|sp|Q5FHL5|SYP_EHRRG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|58416686|emb|CAI27799.1| Prolyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel] Length = 426 Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats. Identities = 203/440 (46%), Positives = 288/440 (65%), Gaps = 15/440 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY++P L+E P D + SH LR+G+I Q + GIY+WLPLG K L N+ +I+EE Sbjct: 1 MRLSKYYIPTLKETPTDVSVTSHVYSLRSGLIRQVASGIYAWLPLGLKVLKNIENVIKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++G +E+ +P +Q A LW ESGRY+ YG EMLR+ DRN++ M++GPTHEEV+TD+ R+ Sbjct: 61 MNKSGILEVLMPLIQPASLWQESGRYNDYGSEMLRIKDRNNREMVFGPTHEEVVTDLLRT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+NLP YQ+Q KFRDELRPR+G+MR REFLMKDAYSFD + SYN MF Sbjct: 121 TLTSYKNLPLILYQVQWKFRDELRPRYGIMRCREFLMKDAYSFDKDFNSAIESYNLMFKV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF RLGL I ++A+SGPIGG+LSHEF +LA++GE+ ++ +D + Sbjct: 181 YIQIFRRLGLTPIAVKADSGPIGGNLSHEFHILANSGESTLYYDQDI-----------IN 229 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I + N +E+ Y A D+HN + +P + +++GIE+GHIFY G KYS M+A Sbjct: 230 LINNDNIDIEKIKNTYTAADDLHNSE-TCPIPASNIKTSKGIEIGHIFYLGDKYSKTMNA 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 F + + + MG YGIG R+V A+IE SHD GIIWP+ +APFK SL+N+ + ++ Sbjct: 289 AFS-QNNETQLLHMGCYGIGVSRLVGAIIEVSHDNNGIIWPEEIAPFKFSLVNVFSANKE 347 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 CR+ E +YA+L DV +DD + G +F+ DLLG P QVI+G + +E++ Sbjct: 348 CRNISENLYAKLDSN--DVLYDDTEDSTGIKFSRMDLLGMPWQVIIGKTTIEHGLIEVRQ 405 Query: 421 RLTGIREDMSLEEVINYASH 440 R + MS E+ +N Sbjct: 406 RSSKKSLLMSTEQFLNNFKK 425 >gi|56416716|ref|YP_153790.1| prolyl-tRNA synthetase [Anaplasma marginale str. St. Maries] gi|81821288|sp|Q5PAZ5|SYP_ANAMM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|56387948|gb|AAV86535.1| prolyl-tRNA synthetase [Anaplasma marginale str. St. Maries] Length = 425 Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats. Identities = 202/439 (46%), Positives = 279/439 (63%), Gaps = 15/439 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ ++P +++ D +ASHK LR G++ Q++ G+Y+WLPLG K L + I+REE Sbjct: 1 MRLSECYVPTMKDVSSDVVVASHKYSLRAGLVRQNASGLYTWLPLGLKVLRTIERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + +G +E+ +P++Q ADLW ES RYDSYG EMLR+ DR+ + M++GPTHEE ++D+ RS Sbjct: 61 MDSSGFLEILMPSVQPADLWRESLRYDSYGPEMLRMQDRSGREMVFGPTHEEAISDVVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR+LP YQIQ KFRDELRPR G+MR REFLMKDAYSFD+ EG SY +F + Sbjct: 121 SLKSYRDLPINLYQIQWKFRDELRPRHGIMRGREFLMKDAYSFDVDFEGVMRSYENVFSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL I +A+SG IGG +SHEF VL TGE+ V+ K +D Sbjct: 181 YFRIFRRLGLVPIAAKADSGAIGGSISHEFHVLVPTGESTVYHDKKALDLS--------- 231 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + E+ + YAAT D H+ + P + +VS +GIEV H+FY G +YS PM+ Sbjct: 232 --KNDYCTTEEIASVYAATEDAHDPQNCGVDPNDLQVS-KGIEVAHVFYLGDRYSAPMNV 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 F DG + MG YGIG R+VAA+IE HD GI WP+S+APFK+ ++N+ ++ Sbjct: 289 KFHDKDGNSAHALMGCYGIGISRLVAAIIEVFHDDVGIRWPESIAPFKVGIVNLLTTNED 348 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C+ E IYA L+ +DD + G + A DLLG P QVI+G+ FV D VE+K+ Sbjct: 349 CKTTAETIYAALAD---SSLYDDSTDSPGVKLARMDLLGMPWQVIIGNSFVKDKVVELKN 405 Query: 421 RLTGIREDMSLEEVINYAS 439 R G E +++ +I Sbjct: 406 RANGATERCTVDALIARMQ 424 >gi|254455357|ref|ZP_05068786.1| prolyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211] gi|207082359|gb|EDZ59785.1| prolyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211] Length = 444 Score = 334 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 205/449 (45%), Positives = 287/449 (63%), Gaps = 9/449 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F+PIL+ NP +A+I SH+LMLR GMI Q S GIYSWLPLG K + + I+REE Sbjct: 1 MLLSKSFIPILKNNPSEAKIKSHQLMLRVGMIKQASAGIYSWLPLGFKVMKKIEKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q++ GA E+ +PT+QS+++W ESGRYD YG+EMLR+ DR ++ M+YGPT+EE +T+IFRS Sbjct: 61 QDKIGAQEILMPTIQSSEIWKESGRYDDYGEEMLRIKDRQNREMLYGPTNEEQVTEIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQ KFRDE+RPRFG+MR REF MKDAYSFD+T E + SYNK F+S Sbjct: 121 SLKSYKSLPQLLYHIQWKFRDEIRPRFGIMRGREFYMKDAYSFDITDEDAFFSYNKFFLS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLR F RL L +IPM A++GPIGG+LSHEFI+LADTGE+++F K D Sbjct: 181 YLRTFKRLSLTAIPMAADTGPIGGNLSHEFIILADTGESKIFTDKRIFDLTNDDTEL--- 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS-LPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + SL + +++ Y+ T + N+ F+ + E R+ +GIEVGHIFYFG KYS M Sbjct: 238 EKSSLEQMRKRYEKFYSVTDEKFNKVEFEKMVSEENRLITKGIEVGHIFYFGDKYSKAMD 297 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS---LINIKA 356 GK +V+MGSYGIG R+V A+IE+ +D + I ++ + I Sbjct: 298 TAVDLPGGKKDFVKMGSYGIGVSRLVGAIIEAKYDDENEIMKWPLSVAPYDIALIPMINK 357 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 +D + KI + L + + DD E S+ +L+G P Q+I+G K + Sbjct: 358 NDNSALEKANKINSELIRNNIEAIIDDTDENYSSKIKKMNLIGAPYQIIIGKKS-DGDLL 416 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 E K G +++SLE++I + + ++N Sbjct: 417 EFKE-PGGETQNLSLEKIIEIITKQKASN 444 >gi|255004184|ref|ZP_05278985.1| prolyl-tRNA synthetase [Anaplasma marginale str. Virginia] Length = 425 Score = 332 bits (852), Expect = 6e-89, Method: Composition-based stats. Identities = 201/439 (45%), Positives = 279/439 (63%), Gaps = 15/439 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ ++P +++ D +ASHK LR G++ Q++ G+Y+WLPLG K L + I+REE Sbjct: 1 MRLSECYVPTMKDVSSDVVVASHKYSLRAGLVRQNASGLYTWLPLGLKVLRTIEHIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + +G +E+ +P++Q ADLW ES RYDSYG EMLR+ DR+ + M++GPTHEE ++D+ RS Sbjct: 61 MDSSGFLEILMPSVQPADLWRESLRYDSYGPEMLRMQDRSGREMVFGPTHEEAISDVVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR+LP YQIQ KFRDELRPR G+MR REFLMKDAYSFD+ EG SY +F + Sbjct: 121 SLKSYRDLPINLYQIQWKFRDELRPRHGIMRGREFLMKDAYSFDVDFEGVMRSYENVFSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL I +A+SG IGG +SHEF VL TGE+ V+ K +D Sbjct: 181 YFRIFRRLGLVPIAAKADSGAIGGSISHEFHVLVPTGESTVYHDKKALDLS--------- 231 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + E+ + YAAT D H+ + P + +VS +GIEV H+FY G +YS PM+ Sbjct: 232 --KNDYCTTEEIASVYAATEDAHDPQNCGVDPNDLQVS-KGIEVAHVFYLGDRYSAPMNV 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 F +G + MG YGIG R+VAA+IE HD GI WP+S+APFK+ ++N+ ++ Sbjct: 289 KFHDKNGNSAHALMGCYGIGISRLVAAIIEVFHDDVGIRWPESIAPFKVGIVNLLTTNED 348 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C+ E IYA L+ +DD + G + A DLLG P QVI+G+ FV D VE+K+ Sbjct: 349 CKTTAETIYAALAD---SSLYDDSTDSPGVKLARMDLLGMPWQVIIGNSFVKDKVVELKN 405 Query: 421 RLTGIREDMSLEEVINYAS 439 R G E +++ +I Sbjct: 406 RANGATEKCTVDALIARMQ 424 >gi|222475082|ref|YP_002563497.1| prolyl-tRNA synthetase (proS) [Anaplasma marginale str. Florida] gi|254994925|ref|ZP_05277115.1| prolyl-tRNA synthetase [Anaplasma marginale str. Mississippi] gi|255003060|ref|ZP_05278024.1| prolyl-tRNA synthetase [Anaplasma marginale str. Puerto Rico] gi|222419218|gb|ACM49241.1| prolyl-tRNA synthetase (proS) [Anaplasma marginale str. Florida] Length = 425 Score = 332 bits (852), Expect = 6e-89, Method: Composition-based stats. Identities = 201/439 (45%), Positives = 280/439 (63%), Gaps = 15/439 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ ++P +++ D +ASHK LR G++ Q++ G+Y+WLPLG K L + I+REE Sbjct: 1 MRLSECYVPTMKDVSSDVVVASHKYSLRAGLVRQNASGLYTWLPLGLKVLRTIEHIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + +G +E+ +P++Q ADLW ES RYDSYG EMLR+ DR+ + M++GPTHEE ++D+ RS Sbjct: 61 MDSSGFLEILMPSVQPADLWRESLRYDSYGPEMLRMQDRSGREMVFGPTHEEAISDVVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR+LP YQIQ KFRDELRPR G+MR REFLMKDAYSFD+ EG+ SY +F + Sbjct: 121 SLKSYRDLPINLYQIQWKFRDELRPRHGIMRGREFLMKDAYSFDVDFEGAMRSYENVFSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL I +A+SG IGG +SHEF VL TGE+ V+ K +D Sbjct: 181 YFRIFRRLGLVPIAAKADSGAIGGSISHEFHVLVPTGESTVYHDKKALDLS--------- 231 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + E+ + YAAT D H+ + P + +VS +GIEV H+FY G +YS PM+ Sbjct: 232 --KNDYCTTEEIASVYAATEDAHDPQNCGVDPNDLQVS-KGIEVAHVFYLGDRYSAPMNV 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 F +G + MG YGIG R+VAA+IE HD GI WP+S+APFK+ ++N+ ++ Sbjct: 289 KFHDKNGNSAHALMGCYGIGISRLVAAIIEVFHDDVGIRWPESIAPFKVGIVNLLTTNED 348 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C+ E IYA L+ +DD + G + A DLLG P QVI+G+ FV D VE+K+ Sbjct: 349 CKTTAETIYAALAD---SSLYDDSTDSPGVKLARMDLLGMPWQVIIGNSFVKDKVVELKN 405 Query: 421 RLTGIREDMSLEEVINYAS 439 R G E +++ +I Sbjct: 406 RANGATEKCTVDALIARMQ 424 >gi|148284536|ref|YP_001248626.1| prolyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong] gi|146739975|emb|CAM80015.1| prolyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong] Length = 433 Score = 332 bits (851), Expect = 7e-89, Method: Composition-based stats. Identities = 201/440 (45%), Positives = 290/440 (65%), Gaps = 11/440 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E+P AEI SHKLMLR GMI Q GIY+WLPLG K L N+ I+R+ Sbjct: 1 MRLSQYFLPLLKEDPAGAEIISHKLMLRAGMIKQACAGIYNWLPLGIKVLQNIQDIVRKN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N E+ +P +Q A LW ES RY++YGKEML++ DR+D +++GPT+EE++TDIFRS Sbjct: 61 MNAAQCTELLMPCIQPASLWKESSRYNAYGKEMLKIKDRHDNDLLFGPTNEELITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY++LP FY IQ KFRDE+RPRFGVMRSREF+MKDAYSFD+ + SYN M+++ Sbjct: 121 CIQSYKDLPKNFYHIQWKFRDEIRPRFGVMRSREFIMKDAYSFDIDQTSAIQSYNLMYLT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+IF LGLK IP++A++G IGG LSHEF ++ TG+++++ + +++ + Sbjct: 181 YLKIFKDLGLKVIPVQADNGAIGGKLSHEFHIITATGDSKIYYDSTKFNPFDYNQDLSLN 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L + E ++ + + +K + GIEVGHIFYFGTKYS M A Sbjct: 241 KLEQLYIVTED-----------KHKTYQNQISNDKISTISGIEVGHIFYFGTKYSELMKA 289 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +GK V+MGSYGIG R++ A+IE++HD GIIWP +VAPFK+S+IN+ ++ Sbjct: 290 CIQMQNGKLTAVEMGSYGIGISRLIGAIIEANHDQYGIIWPQNVAPFKVSVINLLPNNDK 349 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C+ ++Y L++ D DD G + AV DL+G P Q+I+G F+ S +E K+ Sbjct: 350 CKQTSNQLYQILTQQKTDALLDDTSSSAGHKLAVHDLIGIPYQIIIGKNFIETSTIEFKY 409 Query: 421 RLTGIREDMSLEEVINYASH 440 R + +S++ +IN + Sbjct: 410 RHNHQLQKLSIDALINRLTE 429 >gi|189182913|ref|YP_001936698.1| prolyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda] gi|189179684|dbj|BAG39464.1| prolyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda] Length = 433 Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats. Identities = 199/440 (45%), Positives = 289/440 (65%), Gaps = 11/440 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP+L+E+P AEI SHKLMLR GMI Q GIY+WLPLG K L N+ I+R+ Sbjct: 1 MRLSQYFLPLLKEDPAGAEIISHKLMLRAGMIKQACAGIYNWLPLGIKVLQNIQDIVRKN 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N IE+ +P +Q A LW ES RY++YGKEML++ DR+D +++GPT+EE++TDIFRS Sbjct: 61 MNAAQCIELLMPCIQPASLWKESSRYNAYGKEMLKIKDRHDNDLLFGPTNEELITDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY++LP FY IQ KFRDE+RPRFGVMRSREF+MKDAYSFD+ + SYN M+++ Sbjct: 121 SIQSYKDLPKNFYHIQWKFRDEIRPRFGVMRSREFIMKDAYSFDIDQASAIQSYNLMYLT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+IF LGLK IP++A++G IGG LSHEF ++ TG+++++ + +++ + Sbjct: 181 YLKIFKDLGLKVIPVQADNGAIGGKLSHEFHIITATGDSKIYYDSTKFNPFDYNQDLSLN 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + L + E ++ + + + + GIEVGHIFYFGTKYS M A Sbjct: 241 KLEQLYIVTED-----------KHKTDQNQISNDTISTISGIEVGHIFYFGTKYSELMKA 289 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +GK V+MGSYGIG R++ A+IE++HD GIIWP +VAPFK+S+IN+ ++ Sbjct: 290 CIQLQNGKLTAVEMGSYGIGISRLIGAIIEANHDEYGIIWPQNVAPFKVSVINLLPNNDK 349 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C+ ++Y L++ D DD G + A DL+G P Q+I+G F+ + +E K+ Sbjct: 350 CKQTSNQLYQILTQQKTDALLDDTSSSAGHKLAAHDLIGIPYQIIIGKNFIETATIEFKY 409 Query: 421 RLTGIREDMSLEEVINYASH 440 R + +S++ +IN + Sbjct: 410 RHNQQLQKLSIDALINQLTE 429 >gi|71083600|ref|YP_266319.1| prolyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062] gi|114152227|sp|Q4FM73|SYP_PELUB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|71062713|gb|AAZ21716.1| proline-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062] Length = 444 Score = 329 bits (842), Expect = 8e-88, Method: Composition-based stats. Identities = 204/449 (45%), Positives = 280/449 (62%), Gaps = 9/449 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F+PIL+ NP +A+I SH+LMLR GMI Q S GIYSWLPLG K + + I+REE Sbjct: 1 MYISKSFIPILKNNPSEAKIKSHQLMLRVGMIKQSSAGIYSWLPLGFKVMKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QN+ GA E+ +PT+Q +D+W ESGRYD YG EMLR+ DR + M+YGPT+EE++TDIFRS Sbjct: 61 QNKIGAQEILMPTIQPSDIWKESGRYDDYGDEMLRIKDRQGREMLYGPTNEELVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQ KFRDE+RPRFG+MR REF MKDAYSFD+ E + SYNK F S Sbjct: 121 SVKSYKSLPQLLYHIQWKFRDEVRPRFGIMRGREFYMKDAYSFDVNDEDATFSYNKFFFS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+ F RL L +IPM A++GPIGG+LSHEFI+LADTGE+++F K D Sbjct: 181 YLKTFKRLELSAIPMAADTGPIGGNLSHEFIILADTGESKIFTDKRVFDL---GSEGTVL 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLF-DSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D SL + +++ YA + N+ F + + E R+ +GIEVGHIFYFG KYS ++ Sbjct: 238 DRQSLQDLRKKYEQYYAVADEKFNKNEFEEKVSEENRLITKGIEVGHIFYFGDKYSKALN 297 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI---SLINIKA 356 A GK +V+MGSYGIG R+V A+IE+ +D K I + + I Sbjct: 298 AAVDLPGGKKDFVKMGSYGIGVSRLVGAIIEAKYDQKDEIMKWPFSVAPYELAIIPMINK 357 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 +D D K++ D DDM E + S+ +L+G P Q+I+G D+ + Sbjct: 358 NDTSALDKANKLFKHFESKNIDTIIDDMDENLSSKIKKFNLIGVPYQIILGKNS-EDNLL 416 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 E K + + ++L+++ + + N Sbjct: 417 EFKE-IGKDPKSLTLDQITQILTEQKLKN 444 >gi|251772092|gb|EES52662.1| prolyl-tRNA synthetase [Leptospirillum ferrodiazotrophum] Length = 429 Score = 328 bits (840), Expect = 1e-87, Method: Composition-based stats. Identities = 177/443 (39%), Positives = 250/443 (56%), Gaps = 28/443 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++ E+P +AE SH+LMLR G + + + G+Y +LP G + L V I+REE Sbjct: 1 MRTTRLPYVTFHEDPAEAETVSHRLMLRGGYVRKVAGGLYDFLPFGARVLRRVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P LQ A++W ++GR++ YGKE+ RL DR+D++ GPTHEEV+T++ Sbjct: 61 MDRAGAFEILMPALQPAEMWEKTGRWEKYGKELFRLTDRHDRSFALGPTHEEVVTELASG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP T YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + E Y M + Sbjct: 121 LLNSYRQLPVTLYQIQTKFRDEMRPRFGLMRGREFVMKDAYSFARSKEEGAECYRIMQEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL + A++G IGG SHEF+VLA +GE V Sbjct: 181 YFRIFARLGLSVRMVEADTGNIGGYSSHEFMVLAPSGEDTVVFCGSC------------- 227 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 YA+ ++ L + IEVGH+F G +YS PM A Sbjct: 228 --------------RYASNVELAGAATHCPLCQAPLERTTAIEVGHVFDLGDRYSAPMEA 273 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 F DG++ MG YGIG R++AA IE SHD GIIWP ++APF ++++ + D Sbjct: 274 GFLDPDGRETLFHMGCYGIGVSRLLAAAIEQSHDDAGIIWPTAMAPFAVAVLPLGGRDAE 333 Query: 361 CRDACEKIYARLSKV-GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + +I L + +V DD + G +FA ADL GFP+QVI+G K + +++ EIK Sbjct: 334 LSEKALRIAGLLEERFPEEVLVDDRDLRAGVKFADADLCGFPIQVILGEKGLRENRAEIK 393 Query: 420 HRLTGIREDMSLEEVINYASHRF 442 R +G R + L + + + Sbjct: 394 VRSSGERNTVDLSALSEWIADHL 416 >gi|269958866|ref|YP_003328655.1| prolyl-tRNA synthetase [Anaplasma centrale str. Israel] gi|269848697|gb|ACZ49341.1| prolyl-tRNA synthetase [Anaplasma centrale str. Israel] Length = 425 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 198/437 (45%), Positives = 283/437 (64%), Gaps = 15/437 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ ++P +++ D +ASH+ LR G++ Q++ G+Y+WLPLG K L + I+REE Sbjct: 1 MRLSECYVPTMKDVSSDVIVASHRYSLRAGLVRQNASGLYTWLPLGLKVLRGIERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + +G +E+ +P++Q A+LW ES RYDSYG EMLR+ DR+ + M++GPTHEE ++D+ RS Sbjct: 61 MDSSGFLEILMPSVQPAELWRESQRYDSYGLEMLRMQDRSGREMVFGPTHEESISDVVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR+LP + YQ+Q KFRDELRPR G+MR REFLMKDAYSFD+ E + SY+ +F + Sbjct: 121 SLKSYRDLPISLYQMQWKFRDELRPRHGIMRCREFLMKDAYSFDVDFESAMRSYSNVFSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLRIF RLGL +I +A+SG IGG SHEF VL TGE+ V+ + +D S Sbjct: 181 YLRIFRRLGLVAIAAKADSGAIGGSTSHEFHVLVPTGESTVYHDRKALDISRKS------ 234 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +E T YAAT D H+ + P++ +VS +GIEV H+FY G +YS PM+ Sbjct: 235 -----DCSMEDVTGVYAATEDAHDPQNCGVHPDDLQVS-KGIEVAHVFYLGDRYSAPMNV 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 F G + MG YGIG R+VAA+IE HD GI WP+S+APF++ ++N+ A + Sbjct: 289 KFHDKSGNSNNALMGCYGIGISRLVAAIIEVFHDDVGIRWPESIAPFRVGIVNLLATNGD 348 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C+ E IY L+ +DD + G + A DLLG P QVI+G+ FV D VE+K+ Sbjct: 349 CKTTAETIYTALAD---SSLYDDSADSPGVKLARMDLLGMPWQVIIGNSFVKDKVVELKN 405 Query: 421 RLTGIREDMSLEEVINY 437 R +G+ E ++ +I Sbjct: 406 RASGVTEKCTVGSLIAR 422 >gi|91761979|ref|ZP_01263944.1| prolyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002] gi|91717781|gb|EAS84431.1| prolyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002] Length = 444 Score = 327 bits (837), Expect = 3e-87, Method: Composition-based stats. Identities = 204/449 (45%), Positives = 279/449 (62%), Gaps = 9/449 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F+PIL+ NP +A+I SH+LMLR GMI Q S GIYSWLPLG K + + I+REE Sbjct: 1 MYISKSFIPILKNNPSEAKIKSHQLMLRVGMIKQSSAGIYSWLPLGFKVMKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QN GA E+ +PT+Q +D+W ESGRYD YG EMLR+ DR + M+YGPT+EE++TDIFRS Sbjct: 61 QNTIGAQEILMPTIQPSDIWKESGRYDDYGDEMLRIKDRQGREMLYGPTNEELVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP Y IQ KFRDE+RPRFG+MR REF MKDAYSFD+ E + SYNK F S Sbjct: 121 SVKSYKSLPQLLYHIQWKFRDEVRPRFGIMRGREFYMKDAYSFDVNDEDATFSYNKFFFS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+ F RL L +IPM A++GPIGG+LSHEFI+LADTGE+++F K D Sbjct: 181 YLKTFKRLELSAIPMAADTGPIGGNLSHEFIILADTGESKIFTDKRVFDL---GSEGTVL 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLF-DSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D SL + +++ YA + N+ F + + E R+ +GIEVGHIFYFG KYS ++ Sbjct: 238 DRQSLQDLRKKYEQYYAVADEKFNKNEFEEKVSEENRLITKGIEVGHIFYFGDKYSKALN 297 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI---SLINIKA 356 A GK +V+MGSYGIG R+V A+IE+ +D K I + + I Sbjct: 298 AAVDLPGGKKDFVKMGSYGIGVSRLVGAIIEAKYDQKDEIMKWPFSVAPYELAIIPMINK 357 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 +D D K++ D DDM E + S+ +L+G P Q+I+G D+ + Sbjct: 358 NDTSALDKANKLFKHFESKNIDTIIDDMDENLSSKIKKFNLIGVPYQIILGKNS-EDNLL 416 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 E K + + ++L+++ + + N Sbjct: 417 EFKE-IGKDPKSLTLDQITQILTEQKLKN 444 >gi|78777058|ref|YP_393373.1| prolyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251] gi|114152275|sp|Q30S93|SYP_SULDN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|78497598|gb|ABB44138.1| Prolyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251] Length = 435 Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats. Identities = 161/445 (36%), Positives = 242/445 (54%), Gaps = 12/445 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MRRS+ F+P +E P DA + SHK ++R G I+Q G+Y++LPLG+ L+ + A+++EE Sbjct: 1 MRRSRAFIPTAKEAPSDATLPSHKFLVRGGFINQQGAGLYNFLPLGKIVLEKIRAVVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ + + LW SGR ++ GKEMLR+ DR+ + PT+EE M ++ ++ Sbjct: 61 LDLAGCNEVQLSFVTPIGLWERSGRSEAMGKEMLRINDRHQNEFVLSPTNEEAMVELVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP YQI KFRDE RPR+G++R REFLMKD YSF + + ++ M + Sbjct: 121 RVTSYKDLPLNLYQINTKFRDEARPRYGLLRGREFLMKDGYSFHSSTQDMIREFDLMEET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTDF 239 Y +IF RLGL + A+SG IGGD S EF VLAD+GE + C I + + Sbjct: 181 YKKIFTRLGLDFRVVAADSGAIGGDGSKEFHVLADSGEDTLIVCQSCNYGANIETIDEFK 240 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN-KRVSARGIEVGHIFYFGTKYSLPM 298 D I LN + ++ K+ +GIEVGHIF GTKYS + Sbjct: 241 DKIDELNEK---------SYEELKELKIDQKCSCGANLHFKKGIEVGHIFQLGTKYSAAL 291 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A F +G+ +M ++GIG R+VAA+IE +HD G IW AP+ ++++ D Sbjct: 292 EANFSDENGRSKPFEMATFGIGVSRLVAAIIEQNHDESGCIWTKESAPYIVNIMVSNVKD 351 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + E +YA+L DV +DD E+ G + A+L+GFP +I+G K + V+I Sbjct: 352 EAQMSLGEDLYAKLRAAKVDVIFDDTKERFGFKMKDAELIGFPYTLIIG-KELEGGLVQI 410 Query: 419 KHRLTGIREDMSLEEVINYASHRFS 443 R T + + Sbjct: 411 FDRKTKESISVESSSAYDKIMELIK 435 >gi|88607069|ref|YP_505231.1| prolyl-tRNA synthetase [Anaplasma phagocytophilum HZ] gi|114152168|sp|Q2GK70|SYP_ANAPZ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|88598132|gb|ABD43602.1| prolyl-tRNA synthetase [Anaplasma phagocytophilum HZ] Length = 426 Score = 323 bits (827), Expect = 4e-86, Method: Composition-based stats. Identities = 196/440 (44%), Positives = 280/440 (63%), Gaps = 16/440 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+++ P ++ D ASHK +R G++ Q + GIY+ LPLG L V IIREE Sbjct: 1 MRLSEFYSPTVKNVSSDVVSASHKYSIRAGIVSQTASGIYTLLPLGLMVLRKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N G E+ +PT+Q ADLW ES RYDSYG+E++R+ DR + M+ GPTHEEV+TD+ RS Sbjct: 61 INAVGFSEILMPTMQPADLWKESQRYDSYGQELIRIHDRGGREMVLGPTHEEVVTDLVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR+LP YQIQ KFRDELRPR G++RSREFLM DAYSFD E + +Y+ +F + Sbjct: 121 SLKSYRDLPVNLYQIQWKFRDELRPRNGILRSREFLMMDAYSFDTDFEKAMKTYDAVFRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y + F R+ L++I ++A+ G IGG +SHEF VL TGE+ V+ + ++ Sbjct: 181 YRKAFKRMNLQTIALKADMGAIGGSVSHEFHVLTPTGESTVYYDERALELSE-------- 232 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +E+ YAAT D+H+EK PE+ +ARGIEVGHIFY +YS M+ Sbjct: 233 ---MNDYGIEELKEVYAATDDMHDEKSCGIAPED-LKTARGIEVGHIFYLDDRYSRTMNV 288 Query: 301 TFKGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 F DG +V+MG YGIG R++ A+IE HD GI WP SVAPFK+ ++N+ + ++ Sbjct: 289 KFCNTDGHSGTHVKMGCYGIGISRLIGALIEVFHDDAGIKWPLSVAPFKVGIVNLFSKNE 348 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 C+ E+I++ L D +DD + G + + DL+G P QVIVG+ F+ D +E+K Sbjct: 349 ECKRVSERIHSVLPN---DSLYDDRDDTPGVKLSRMDLIGLPWQVIVGNSFIKDGVLELK 405 Query: 420 HRLTGIREDMSLEEVINYAS 439 +R TG E +S+++V++ S Sbjct: 406 NRATGDIELLSVDDVVSRIS 425 >gi|88657672|ref|YP_507541.1| prolyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas] gi|114152195|sp|Q2GG92|SYP_EHRCR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|88599129|gb|ABD44598.1| prolyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas] Length = 424 Score = 322 bits (824), Expect = 1e-85, Method: Composition-based stats. Identities = 201/440 (45%), Positives = 283/440 (64%), Gaps = 16/440 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y++P L+E D + SHK +R G+I Q + GIY+WLPLG K L N+ I+REE Sbjct: 1 MRLSDYYVPTLKETSADISVISHKYSIRAGLIKQIASGIYTWLPLGLKVLKNIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++G++E+ +P +Q A LW ESGRYD YG EMLR+ DRN + M++GPTHEEV+TDI R+ Sbjct: 61 MNKSGSLEILMPLIQPASLWKESGRYDDYGSEMLRITDRNQREMLFGPTHEEVITDILRT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 S+++LP YQIQ KFRDELRPR+G+MR REFLMKDAYSFD G+ SYN MF + Sbjct: 121 TPVSHKDLPLILYQIQWKFRDELRPRYGIMRCREFLMKDAYSFDKDFSGAISSYNLMFKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF +LGL I ++A+SGPIGG+LSHEF VLA++GE+ ++ +D ++ Sbjct: 181 YIKIFQKLGLTPIAVKADSGPIGGNLSHEFHVLANSGESTLYYDQDIIEL---------- 230 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + S + VE+ Y A D+H+ + + +K ++GIE+GHIF+ G KYS PM+A Sbjct: 231 -MNSESIDVEKIKNTYTAADDMHDPQAC-PISSDKVKISKGIEIGHIFHLGDKYSKPMNA 288 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 F + +QMG YGIG R+VAA+IE HD KGIIWP++VAPFK SL+N+ + Sbjct: 289 NFCD-SNNNKLLQMGCYGIGVSRLVAAIIEVFHDNKGIIWPETVAPFKFSLVNLYTSNDK 347 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C+ E ++ +L + G + A DLLG P QVI+G V +E+++ Sbjct: 348 CKKVAENLHMQLYDDVLYDDT---DDSPGIKLARTDLLGMPWQVIIGKSTVEQDLIEVRN 404 Query: 421 RLTGIREDMSLEEVINYASH 440 RLT + +S E+ +N Sbjct: 405 RLTKDKVLISTEQFLNKLKK 424 >gi|254458440|ref|ZP_05071865.1| prolyl-tRNA synthetase [Campylobacterales bacterium GD 1] gi|207084748|gb|EDZ62035.1| prolyl-tRNA synthetase [Campylobacterales bacterium GD 1] Length = 434 Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats. Identities = 157/442 (35%), Positives = 241/442 (54%), Gaps = 8/442 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MRRS+ F+P +E P DA + SH+ ++R G I+Q G+Y++LPLG+ L+ + I++EE Sbjct: 1 MRRSRAFIPTTKEVPNDATLPSHQFLVRGGFINQQGAGLYNFLPLGKIVLEKIRTIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ + + LW SGR D+ GKEMLR+ DR+ + PT+EE M ++ ++ Sbjct: 61 LDMAGCNEVQLSFVTPIGLWDRSGRADAMGKEMLRIQDRHQNDFVLSPTNEEAMVELVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP YQI KFRDE RPR+G++R REFLMKD YSF + E ++ M + Sbjct: 121 RVTSYKDLPLNLYQINTKFRDEARPRYGLLRGREFLMKDGYSFHASTEDMIREFDLMEET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF RLGL ++A+SG IGG+ S EF VLAD+GE + + D+ E + Sbjct: 181 YKKIFTRLGLDFRVVQADSGAIGGEGSKEFHVLADSGEDTIIVCESC-DYGANIETIFDN 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + V+ S +GIEVGHIF GTKYS + A Sbjct: 240 E-----EEVDALNEKTYEELQTKEISEKCSCG-GNLSFKKGIEVGHIFQLGTKYSSALEA 293 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 F +GK +M ++GIG R+VA+VIE +HD G IW AP+ I+++ D+ Sbjct: 294 NFSDENGKPRPFEMATFGIGVSRLVASVIEQNHDENGCIWTKETAPYTINIMVSNIKDET 353 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 E++Y +L + +DD E+ G + A+L+GFP VI+G K + + V++ Sbjct: 354 QMTLGEELYLKLLGENVEAMFDDRKERFGFKMKDAELIGFPYTVIIG-KELDNGLVQVYD 412 Query: 421 RLTGIREDMSLEEVINYASHRF 442 R T + + ++ + Sbjct: 413 RKTQEKISVKTGDIYKHIMELI 434 >gi|124515073|gb|EAY56584.1| Prolyl-tRNA synthetase [Leptospirillum rubarum] Length = 422 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 182/443 (41%), Positives = 256/443 (57%), Gaps = 27/443 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L E P +AE+ SH+LMLR G + + + G+YS+LP+ +AL V +IIREE Sbjct: 1 MKASCDPVQTLHEEPAEAEVVSHRLMLRAGFVRKLAGGVYSYLPMAVRALRKVESIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N G E+ +P LQ +DLW ++GR+ +YG E+ RL DR+++A GPTHEEV+TD+ Sbjct: 61 MNSAGGQEVLLPALQPSDLWEKTGRWQAYGPELFRLHDRHERAFALGPTHEEVITDLVSQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR LPF YQIQ KFRDE RPRFG++R REF+MKDAYSF + E ++ Y +M + Sbjct: 121 IIRSYRQLPFLAYQIQTKFRDERRPRFGILRGREFIMKDAYSFSASEENARQIYARMQEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL + A+SG IGG+LSHEF+V+AD+GE V + Sbjct: 181 YGRIFLRLGLDHRMVEADSGLIGGNLSHEFMVMADSGEDTVVTCEKCSW----------- 229 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 A+ + + + + S IEVGH+FY G KYS PM Sbjct: 230 ----------------ASNIEKAPDARVCPVCGSALTSRTAIEVGHVFYLGHKYSAPMET 273 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 TF + GK+ MG YGIG R++AA IE SHD KGIIWP ++AP++ +++ + Sbjct: 274 TFLDSAGKEVPFFMGCYGIGVSRILAATIEQSHDDKGIIWPVAMAPYRTAVLPLGPGMSE 333 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 R+ + + S + ++DD + G +F ADL GFP QVI+G + V E+K Sbjct: 334 RREVLSLLESLESLWPGEAYFDDREIRPGMKFQDADLRGFPFQVILGDRHVDKGNGEVKI 393 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R TG R + L ++ S R Sbjct: 394 RRTGERLVLPLRDIPALLSARVQ 416 >gi|284048337|ref|YP_003398676.1| threonyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731] gi|283952558|gb|ADB47361.1| threonyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731] Length = 636 Score = 298 bits (763), Expect = 1e-78, Method: Composition-based stats. Identities = 86/445 (19%), Positives = 156/445 (35%), Gaps = 42/445 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +++E RD +L L M+ + G +LP G + + RE + Sbjct: 231 EAYLHMMEEAEKRDHRKLGKQLGLF--MLSDYGPGFPFFLPNGMIIRNTLIDYWREVHRK 288 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + + LW SG +D Y + M + P + ++ + Sbjct: 289 YGYQEVMTPMIMNRQLWETSGHWDHYKENM-YFTQIDGDDYAIKPMNCPGGMLVYANEPH 347 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY+ LP ++ L R EL G+ R R F DA+ F + P + + + Sbjct: 348 SYKELPLRVGELGLVHRHELSGALHGLFRVRCFTQDDAHIF-MMPNQIEDVIQETIRLFD 406 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ GL T + + DD Sbjct: 407 EVYATFGLTY------------------HAELSTRPDNSMGDDATWEMTTNALRKAMDDF 448 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 SI E A Y D H L DS+ + +++ F + T+ Sbjct: 449 GLKYSINEGDGAFYGPKIDFH---LKDSIGRTWQCGTIQLDMLLPEKF--------NLTY 497 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DG+ H + G++ ++ + +P +AP ++ ++ I Sbjct: 498 TGEDGQKHRPVMIHRVVYGSIERFIGILI---ENYAGAFPAWLAPEQVRVMPITDK---Y 551 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + ++I +L DD E++G + A + P +IVG K V V ++ R Sbjct: 552 NEYAKQIVDKLEAQKIRAHLDDRNEKVGYKIREAQVKKVPYMLIVGEKEVESGTVSVRSR 611 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 G + M ++E I N + Sbjct: 612 DNGEQGAMPVDEFIAKLQDEIKNRK 636 >gi|206603805|gb|EDZ40285.1| Prolyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG'] Length = 422 Score = 297 bits (759), Expect = 3e-78, Method: Composition-based stats. Identities = 183/443 (41%), Positives = 259/443 (58%), Gaps = 27/443 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L E P +AE+ SH+LMLR G++ + + G+YS+LP+ +AL V AIIREE Sbjct: 1 MKASCDPVQTLHEEPAEAEVVSHRLMLRAGLVRKLAGGVYSYLPMAVRALRKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N G E+ +P LQ +DLW ++GR+ +YG E+ RL DR+++A GPTHEEV+TD+ Sbjct: 61 MNSAGGQEVLLPALQPSDLWEKTGRWQAYGPELFRLHDRHERAFALGPTHEEVITDLVSQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR LPF YQIQ KFRDE RPRFG++R REF+MKDAYSF ++ E ++ Y +M + Sbjct: 121 VIRSYRQLPFIAYQIQTKFRDERRPRFGILRGREFIMKDAYSFSVSEENARQIYTRMQEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL + A+SG IGG+LSHEF+V+AD+GE V + Sbjct: 181 YGRIFLRLGLDHRMVEADSGLIGGNLSHEFMVMADSGEDTVVTCEKCSW----------- 229 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 A+ + + + + S IEVGH+FY G KYS PM Sbjct: 230 ----------------ASNIEKAPDARVCPVCGSVLESRTAIEVGHVFYLGHKYSTPMET 273 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 TF + GK+ MG YGIG R++AA IE SHD KGIIWP ++AP++ +++ + Sbjct: 274 TFLDSAGKEVPFFMGCYGIGVSRILAATIEQSHDDKGIIWPVAMAPYRTAVLPLGPGMSE 333 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 R+ + + S + ++DD + G +F ADL GFP QVI+G + V E+K Sbjct: 334 RREVLSLLESLESLWPGESYFDDREIRPGMKFQDADLRGFPFQVILGDRHVDKGDGEVKI 393 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R TG R + L+++ S R Sbjct: 394 RRTGERLVLPLKDIPALLSARVQ 416 >gi|196019376|ref|XP_002118967.1| hypothetical protein TRIADDRAFT_9363 [Trichoplax adhaerens] gi|190577501|gb|EDV18547.1| hypothetical protein TRIADDRAFT_9363 [Trichoplax adhaerens] Length = 408 Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats. Identities = 174/423 (41%), Positives = 269/423 (63%), Gaps = 19/423 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y LP ++ +A++ SHKLML++GMI Q S G+YSWLPLG L+ + +IR E Sbjct: 1 MRLSNYLLPTTKDISSEAKLMSHKLMLKSGMIKQSSSGVYSWLPLGLNVLNKLANLIRVE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRY---DSYGKEMLRLADRNDKAMIYGPTHEEVMTDI 117 N+ E+ +P+LQ +W +SGR ++ + D+ A + P+ EE + ++ Sbjct: 61 LNKINCHEIVLPSLQLLSIWEKSGRAVEDSDMKSQIFHIKDQKQTAYVLPPSGEEAVAEL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 F+S + SY+++ YQI KFRDE+RPR GVMR++EFLMKDAYSFD+ E + SY K+ Sbjct: 121 FKSSVHSYKDVSKILYQITWKFRDEIRPRHGVMRAKEFLMKDAYSFDVNKEKALISYEKI 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT-GETQVFCSKDFMDFPIPSEN 236 F +YL +F ++GL+ IP+ A +G +GG+ SHEF VL+D GE+ ++ ++ ++ Sbjct: 181 FKAYLEVFKKIGLRVIPVLAPTGAMGGNYSHEFHVLSDKNGESTIYYQEELNNY------ 234 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + ++ + YA + H + D K + ++ IEVGH+FY GTKYS Sbjct: 235 -----LKDDEFSLKGYEKFYAKEEEKH---VVDDCKTLKIIKSKSIEVGHLFYLGTKYSK 286 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 ++ T++ ++G+ + +MG YGIG R++AA+IES HD KGIIWPD+++PFK+++INIKA Sbjct: 287 SLNCTYQDSNGELQFPEMGCYGIGVTRLIAAIIESCHDDKGIIWPDAISPFKLAIINIKA 346 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D VCR+ +K+YA LS DV +DD + G +FA DL+G L++I+G K ++ KV Sbjct: 347 EDSVCREFSDKLYANLSGK-YDVLYDDTNKSPGKKFADMDLIGINLEIIIGPKHAANKKV 405 Query: 417 EIK 419 E+K Sbjct: 406 ELK 408 >gi|296133381|ref|YP_003640628.1| threonyl-tRNA synthetase [Thermincola sp. JR] gi|296031959|gb|ADG82727.1| threonyl-tRNA synthetase [Thermincola potens JR] Length = 637 Score = 290 bits (742), Expect = 3e-76, Method: Composition-based stats. Identities = 84/443 (18%), Positives = 152/443 (34%), Gaps = 41/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L + I + G + P G + + RE+ + Sbjct: 232 EYLFRLEEAKKRDHRKLGAELDLFS--IQEEGPGFPFFHPKGMIVRNELEKFWREQHEKA 289 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + + LW +SG +D Y + M +D P + ++++ + S Sbjct: 290 GYQEIRTPIILNRSLWEQSGHWDHYRENM-YFTKIDDIDFAVKPMNCPGSILVYKTRLHS 348 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+ P ++ L R E+ G+MR R F DA+ F L P K K+ Sbjct: 349 YRDFPIRLAELGLVHRHEMSGVLHGLMRVRCFTQDDAHIFML-PSQIKDEIIKVIDLIDN 407 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + G K V T + S + D + Sbjct: 408 FYKVFGFKY------------------HVELSTKPEKAMGSDEIWDLATNALKEALAAKG 449 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E A Y D H L D L + ++ F T+ Sbjct: 450 MDFKINEGDGAFYGPKIDFH---LMDCLGRTWQCGTIQLDFLMPEKFD--------LTYV 498 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG+ H + G++ ++ G +W V +++ + Sbjct: 499 GEDGQKHRPVMIHRVVFGSIERFIGILIEHFAGALPVWLSPVQAKIMTVT------DRSK 552 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 EK+ L + G V D E+IG + A + P ++VG K + + V ++ R Sbjct: 553 QYAEKVADWLKEKGVRVEVDARNEKIGYKIREAQVEKVPYMLVVGDKEMENGTVAVRKRG 612 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 G + ++ ++ + + Sbjct: 613 EGDKGAVNADDFVALITKEIKEK 635 >gi|20808138|ref|NP_623309.1| threonyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4] gi|22654110|sp|Q8R9A4|SYT_THETN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|20516726|gb|AAM24913.1| Threonyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4] Length = 644 Score = 290 bits (742), Expect = 3e-76, Method: Composition-based stats. Identities = 91/443 (20%), Positives = 161/443 (36%), Gaps = 41/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L + IH G + P G + + R+E + Sbjct: 239 EYLHMMEEAKKRDHRKLGKELDLFS--IHPEGPGFPFFHPKGMIIRNILEDFWRKEHIKR 296 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + + +LW SG +D Y + M + + + P + +++S ++S Sbjct: 297 GYQEIRTPIILNEELWKRSGHWDHYKENM-YFTEIDGQTYAIKPMNCPGAMLVYKSTLRS 355 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ L R EL G+MR R F DA+ +TPE + + Sbjct: 356 YRDLPLRLCELGLVHRHELSGVLHGLMRVRSFTQDDAH-LFMTPEQVEDEILGVINLVDY 414 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + G E+ V T + + + + + Sbjct: 415 FYKIFG------------------FEYHVELSTRPENSMGTDEEWELATNALISALKRAN 456 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H L DS+ R + G I + + Sbjct: 457 LPYKVNEGEGAFYGPKIDFH---LKDSIG-------RTWQCGTI-QLDFQMPERFELEYI 505 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG+ H + G++ ++ G W +AP ++ ++ I + Sbjct: 506 GPDGEKHRPIMLHRVIYGSIERFIGILTEHFAGAFPTW---LAPVQVRVLPI---SEKHH 559 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + K+Y RL + V DD E+IG + A L P +IVG + V + V ++ R Sbjct: 560 EYARKVYERLQEHDIRVELDDRNEKIGYKIREAQLQKIPYMLIVGDREVEEGNVSLRSRK 619 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 G +SL+ I + Sbjct: 620 DGDLGPISLDNFIEKILKEIATK 642 >gi|254796740|ref|YP_003081576.1| prolyl-tRNA synthetase [Neorickettsia risticii str. Illinois] gi|254589987|gb|ACT69349.1| prolyl-tRNA synthetase [Neorickettsia risticii str. Illinois] Length = 436 Score = 290 bits (741), Expect = 4e-76, Method: Composition-based stats. Identities = 195/436 (44%), Positives = 276/436 (63%), Gaps = 11/436 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+Y+LP+++ + ++ SHK LR G++ Q G+YSWLPLG K L N+ +IIR+E Sbjct: 6 RVSEYYLPLMKNVSGEVKLRSHKYSLRAGLVKQCGAGLYSWLPLGLKVLKNIESIIRQEL 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G EM +P +Q A LW ESGRY YG+E+L+ DR+D +++GPT+EEV+T I R Sbjct: 66 DSMGMHEMLMPCIQLAKLWEESGRYSDYGRELLKFKDRHDNELLFGPTNEEVITAIVRDD 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SY+ LP Y IQ KFRDE+RPRFG+MR+REFLMKDAYSFD+ + ++ SYNK++ SY Sbjct: 126 LASYKQLPKILYHIQWKFRDEIRPRFGLMRAREFLMKDAYSFDVDQQSARISYNKVYQSY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIV-LADTGETQVFCSKDFMDFPIPSENTDFD 240 LRIF RLGL IP RA +G IGG L+HEF + + GE ++F ++ + D Sbjct: 186 LRIFKRLGLNPIPCRANAGVIGGSLNHEFHITTTEGGEGKIFYPEEIGELVDEFCKIDPS 245 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D +++ + + T + ++ + D +N+ +A+GIEVGHIF FG KYS PM A Sbjct: 246 DEHAVSVMTAKLQELSCFTEECNSSSIED---DNRICAAQGIEVGHIFLFGEKYSAPMQA 302 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 F DG MGSYGIG R++AA+IE D KGIIWP+S+APFK+ LIN+ + Sbjct: 303 RFSDRDGMKKNFYMGSYGIGISRLLAAIIEVYSDDKGIIWPESIAPFKVGLINL---HEE 359 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 E+I+++L V +DD + G +FA DL+G P Q+IVG + D VE+K Sbjct: 360 SCGLAEEIFSKLDS----VIYDDTTDSQGVKFARMDLIGVPFQIIVGKNAIIDGTVELKC 415 Query: 421 RLTGIREDMSLEEVIN 436 RL RE + E+I+ Sbjct: 416 RLDSKRESCNFNELIS 431 >gi|218661849|ref|ZP_03517779.1| prolyl-tRNA synthetase [Rhizobium etli IE4771] Length = 354 Score = 289 bits (740), Expect = 6e-76, Method: Composition-based stats. Identities = 232/354 (65%), Positives = 293/354 (82%) Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 GAIE+S+PTLQSA+LW ESGRYD+YGKEMLR+ DR D+ M+YGPT+EE++TDIFRS +KS Sbjct: 1 GAIELSMPTLQSAELWQESGRYDAYGKEMLRIKDRQDRPMLYGPTNEEMVTDIFRSSVKS 60 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 Y++LP Y IQLKFRDE+RPRFG MRSREF+MKDAYSFDLT EG++HSYNKMF +YLR Sbjct: 61 YKDLPLNLYHIQLKFRDEIRPRFGTMRSREFMMKDAYSFDLTREGAEHSYNKMFAAYLRT 120 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F RLGL++IPMRA++GPIGG+LSHEFI+LADTGE++VFC KDF+ F IP E TDFD + Sbjct: 121 FERLGLRAIPMRADTGPIGGNLSHEFIILADTGESEVFCHKDFVGFDIPDERTDFDSVEG 180 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 L +I E+WT+ YAATS++H+E F+++PE+ R+SARGIEVGHIFYFGTKYS M A +G Sbjct: 181 LQAIFEKWTSLYAATSEMHDEAAFNAVPESDRLSARGIEVGHIFYFGTKYSETMGAKVQG 240 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DGK+H+V MGSYGIG R+V A+IE+SHD GIIWP SVAPF I +IN+KA DQ C D Sbjct: 241 PDGKEHFVHMGSYGIGPTRLVPAIIEASHDDNGIIWPASVAPFDIVVINMKAGDQACDDT 300 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 CE IYA L+K G DV +DD ++ G++FA ADL+G P+Q+I G + V++ +VE+ Sbjct: 301 CELIYAALTKAGKDVLYDDTDDRAGTKFATADLIGVPVQIIAGPRAVANGEVEV 354 >gi|322807448|emb|CBZ05022.1| threonyl-tRNA synthetase [Clostridium botulinum H04402 065] Length = 635 Score = 288 bits (738), Expect = 8e-76, Method: Composition-based stats. Identities = 92/442 (20%), Positives = 159/442 (35%), Gaps = 42/442 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + IH+ G + P G + + REE + G Sbjct: 231 YLNMLEEAKKRDHRKLGKELDLFS--IHEEGPGFPFFHPKGMIIRNILENFWREEHTKAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + +LW +SG +D Y + M + +D P + ++++ + SY Sbjct: 289 YQEIRTPLILNEELWHQSGHWDHYKENM-YFTNIDDSDYAIKPMNCPGGILVYKNSMHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ + R EL G+MR R F DA+ + + + + + Sbjct: 348 RDLPLRLSELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEIV--GIIKLIDK 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F++L + + P S E + D I Sbjct: 406 FYKLFGFEYFVELSTRPEDSMGSDE-----------------DWEIATNGLREALDSIGK 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H K R + G I + ++ G Sbjct: 449 EYRVNEGDGAFYGPKIDFHL----------KDCIGRTWQCGTI-QLDFQMPERFDLSYIG 497 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + G++ ++ + G W V +++ D Sbjct: 498 ADGEKHRPVMVHRTIYGSVERFIGILIEQYAGAFPTWLAPVQVKLMNIT------DSQYD 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +K+ L + V D E+IG + A L P +I+G K V KV ++ R Sbjct: 552 YLKKVEEALKENNIRVEIDTRNEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRKD 611 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G +SLEE I + N Sbjct: 612 GDLGAISLEEFIEKIKNEIKNK 633 >gi|326391979|ref|ZP_08213481.1| threonyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200] gi|325991980|gb|EGD50470.1| threonyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200] Length = 634 Score = 285 bits (730), Expect = 9e-75, Method: Composition-based stats. Identities = 93/442 (21%), Positives = 160/442 (36%), Gaps = 42/442 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + IH G + P G + + R+E + G Sbjct: 230 YLHMLEEAKKRDHRKLGKELDLFS--IHPEGPGFPFFHPKGMIIRNILEDFWRKEHIKHG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + +LW SG +D Y + M + + + P + +++S + SY Sbjct: 288 YQEIKTPIILNEELWRRSGHWDHYKENM-YFTEIDGETYAIKPMNCPGAMLVYKSTMHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R EL G+MR R F DA+ +TPE + + Sbjct: 347 RDLPLRLCELGLVHRHELSGVLHGLMRVRSFTQDDAH-LFMTPEQVEDEILGVINLVDYF 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + + P S E + + + + + Sbjct: 406 YKIFGFEY-FVELSTRPENSMGSDE-----------------DWELATNALISALNRVNL 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H L DS+ R + G I + + G Sbjct: 448 PYKVNEGDGAFYGPKIDFH---LKDSIG-------RTWQCGTI-QLDFQMPERFELEYIG 496 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ ++ G W +AP ++ ++ I Sbjct: 497 PDGEKHRPIMLHRVIYGSIERFIGILTEHFAGAFPTW---LAPVQVRVLPISDKH---YA 550 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + +Y RL + DD E+IG + A L P +IVG K V V ++ R Sbjct: 551 YAQNVYGRLLENDIRAELDDRNEKIGYKIREAQLQKIPYMLIVGDKEVEQGTVSLRSRKE 610 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G +SL E I + Sbjct: 611 GDLGAISLNEFIEKILKEIATK 632 >gi|168183457|ref|ZP_02618121.1| threonine--tRNA ligase [Clostridium botulinum Bf] gi|237796594|ref|YP_002864146.1| threonyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657] gi|259516348|sp|C3KTK0|SYT_CLOB6 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|182673322|gb|EDT85283.1| threonine--tRNA ligase [Clostridium botulinum Bf] gi|229263282|gb|ACQ54315.1| threonine--tRNA ligase [Clostridium botulinum Ba4 str. 657] Length = 635 Score = 285 bits (729), Expect = 9e-75, Method: Composition-based stats. Identities = 91/440 (20%), Positives = 157/440 (35%), Gaps = 42/440 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + IH+ G + P G + + REE + G Sbjct: 231 YLNMLEEAKKRDHRKLGKELDLFS--IHEEGPGFPFFHPKGMIIRNILENFWREEHTKAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW +SG +D Y + M + +D P + ++++ + SY Sbjct: 289 YQEIRTPLILNEALWHQSGHWDHYKENM-YFTNIDDGDYAIKPMNCPGGILVYKNSMHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ + R EL G+MR R F DA+ + + + + + Sbjct: 348 RDLPLRLSELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEIV--GIIKLIDK 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F++L + + P S E + D I Sbjct: 406 FYKLFGFEYFVELSTRPEDSMGSDE-----------------DWEIATNGLREALDSIGK 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H K R + G I + ++ G Sbjct: 449 EYRVNEGDGAFYGPKIDFHL----------KDCIGRTWQCGTI-QLDFQMPERFDLSYIG 497 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + G++ ++ + G W V +++ D Sbjct: 498 ADGEKHRPVMVHRTIYGSVERFIGILIEQYAGAFPTWLAPVQVKLMNIT------DAQYD 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +K+ L + V D E+IG + A L P +I+G K V KV ++ R Sbjct: 552 YLKKVEEALKENNIRVEIDTRNEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRKD 611 Query: 424 GIREDMSLEEVINYASHRFS 443 G +SLEE I + Sbjct: 612 GDLGAISLEEFIEKIKNEIK 631 >gi|323702723|ref|ZP_08114384.1| threonyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574] gi|323532386|gb|EGB22264.1| threonyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574] Length = 636 Score = 285 bits (729), Expect = 1e-74, Method: Composition-based stats. Identities = 84/441 (19%), Positives = 152/441 (34%), Gaps = 41/441 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 I + RD +L L + I G + P G + + R E + G Sbjct: 232 LFRIEEAKRRDHRKLGQELDLFS--IQDEGPGFPFFHPKGMVLRNELENFWRREHKKRGY 289 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + + LW +SG + Y + M +D P + ++++ + SYR Sbjct: 290 QEIRTPIILNRSLWEQSGHWAHYKENM-YFTKIDDADYAVKPMNCPGSILVYKTRMHSYR 348 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ L R EL G+MR R F DA+ F L P K + + + Sbjct: 349 DLPLRLAELGLVHRHELSGALHGLMRVRCFTQDDAHIFML-PSQIKDEIIGVIDLFEYFY 407 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 GL + + P S E + S + Sbjct: 408 KTFGLSYH-VELSTRPEKSMGSDE-----------------IWELATRSLQDALEAKNMP 449 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + E A Y D H L DSL + ++ F K+ T+ G Sbjct: 450 YKVNEGDGAFYGPKIDFH---LTDSLGRTWQCGTIQLD----FQMPEKFD----LTYVGE 498 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H + G++ ++ + +P +AP ++ ++ I D Sbjct: 499 DGQKHRPVMIHRVVFGSIERFIGILT---EHFAGAFPVWLAPVQVKVLPITDKHH---DY 552 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ +L + V D E+I + A P +++G + + + V ++ R G Sbjct: 553 ARELVQKLDAMDIRVELDARNEKINYKIREAQTQKIPYMLVIGDREMENGTVAVRQRGKG 612 Query: 425 IREDMSLEEVINYASHRFSNN 445 + ++E I N Sbjct: 613 DIGAVKMDEFIAKIEDEIKNK 633 >gi|168179213|ref|ZP_02613877.1| threonyl-tRNA synthetase [Clostridium botulinum NCTC 2916] gi|182670074|gb|EDT82050.1| threonyl-tRNA synthetase [Clostridium botulinum NCTC 2916] Length = 635 Score = 285 bits (729), Expect = 1e-74, Method: Composition-based stats. Identities = 91/443 (20%), Positives = 157/443 (35%), Gaps = 41/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L + IH+ G + P G + + + REE + Sbjct: 230 EYLNMIEEAKKRDHRKLGKELDLFS--IHEEGPGFPFFHPKGMIVRNILESFWREEHTKA 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + + LW +SG +D Y + M + +D P + ++++ + S Sbjct: 288 GYQEIRTPLILNEALWHQSGHWDHYKENM-YFTNIDDDDYAIKPMNCPGGILVYKNSMHS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ + R EL G+MR R F DA+ + + + + + Sbjct: 347 YRDLPLRLSELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEVV--GIIKLID 404 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 F++L + + P S E + D I Sbjct: 405 KFYKLFGFEYFVELSTRPEDSMGSDE-----------------DWEIATNGLREALDSIG 447 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H K R + G I + ++ Sbjct: 448 KEYRVNEGDGAFYGPKIDFHL----------KDCIGRTWQCGTI-QLDFQMPERFDLSYI 496 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 GADG+ H + G++ ++ + G W V +++ Sbjct: 497 GADGEKHRPVMVHRTIYGSVERFIGILIEQYAGAFPTWLAPVQVKLMNIT------DSQY 550 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D +K+ L + V D E+IG + A L P +I+G K V KV ++ R Sbjct: 551 DYLKKVEEALKENNIRVEIDTRNEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRK 610 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 G +SLEE I + N Sbjct: 611 DGDLGAISLEEFIEKIKNEIKNK 633 >gi|28211884|ref|NP_782828.1| threonyl-tRNA synthetase [Clostridium tetani E88] gi|73919782|sp|Q891T0|SYT_CLOTE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|28204327|gb|AAO36765.1| threonyl-tRNA synthetase [Clostridium tetani E88] Length = 639 Score = 285 bits (729), Expect = 1e-74, Method: Composition-based stats. Identities = 91/444 (20%), Positives = 159/444 (35%), Gaps = 42/444 (9%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E R D +L L T I++ G + P G + + RE+ + Sbjct: 229 EAYLKMLEEAKRRDHRKLGKELDLFT--INEEGPGFPFFHPKGMVVRNILENFWREKHTK 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + + +LW SG +D Y + M +++ P + +++SH+ Sbjct: 287 AGYDEIRTPVILNEELWHRSGHWDHYKENM-YFTKIDNENFAIKPMNCPGSILVYKSHLH 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY+ P ++ L R EL G+MR R F DA+ F + + Sbjct: 346 SYKEFPMRLGELGLVHRHELSGALHGLMRVRCFTQDDAHIFMTKEQIKDE-ILNVIKLID 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + G + + + P S E + + Sbjct: 405 SFYKVFGFEY-FVELSTRPEDSMGSDE-----------------DWEVATNGLKNALEGA 446 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I E A Y D H K R + G I + T+ Sbjct: 447 GLEYKINEGDGAFYGPKIDFHL----------KDCIGRTWQCGTI-QLDFQMPERFDLTY 495 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DG+ H + G++ ++ G W V +++ Sbjct: 496 VGQDGEKHRPVMVHRVVFGSIERFIGILIEHFAGAFPTWLAPVQVKVMTIT------DSQ 549 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +D K+ L + G V +DD E+IG + A L P +I+G K VS++KV ++ R Sbjct: 550 KDYANKVVNDLKEKGIRVEFDDRNEKIGYKIREAQLQKVPYMIILGDKEVSENKVAVRSR 609 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 G +SL+E + ++ N Sbjct: 610 KEGDLGAISLKEFVAKLNYEIDNR 633 >gi|148381087|ref|YP_001255628.1| threonyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502] gi|153932923|ref|YP_001385460.1| threonyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397] gi|153935084|ref|YP_001388867.1| threonyl-tRNA synthetase [Clostridium botulinum A str. Hall] gi|166223333|sp|A7FY87|SYT_CLOB1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166223334|sp|A5I6L8|SYT_CLOBH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|148290571|emb|CAL84700.1| threonyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502] gi|152928967|gb|ABS34467.1| threonyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397] gi|152930998|gb|ABS36497.1| threonine--tRNA ligase [Clostridium botulinum A str. Hall] Length = 635 Score = 285 bits (729), Expect = 1e-74, Method: Composition-based stats. Identities = 91/443 (20%), Positives = 157/443 (35%), Gaps = 41/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L + IH+ G + P G + + + REE + Sbjct: 230 EYLNMIEEAKKRDHRKLGKELDLFS--IHEEGPGFPFFHPKGMIVRNILESFWREEHTKA 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + + LW +SG +D Y + M + +D P + ++++ + S Sbjct: 288 GYQEIRTPLILNEALWHQSGHWDHYKENM-YFTNIDDDDYAIKPMNCPGGILVYKNSMHS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ + R EL G+MR R F DA+ + + + + + Sbjct: 347 YRDLPLRLSELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEVV--GIIKLID 404 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 F++L + + P S E + D I Sbjct: 405 KFYKLFGFEYFVELSTRPEDSMGSDE-----------------DWEIATNGLREALDSIG 447 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H K R + G I + ++ Sbjct: 448 KEYRVNEGDGAFYGPKIDFHL----------KDCIGRTWQCGTI-QLDFQMPERFDLSYI 496 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 GADG+ H + G++ ++ + G W V +++ Sbjct: 497 GADGEKHRPVMVHRTIYGSVERFIGILIEQYAGAFPTWLAPVQVKLMNIT------DSQY 550 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D +K+ L + V D E+IG + A L P +I+G K V KV ++ R Sbjct: 551 DYLKKVEEALKENNIRVEIDTRNEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRK 610 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 G +SLEE I + N Sbjct: 611 DGDLGAISLEEFIEKIKNEIKNK 633 >gi|170754255|ref|YP_001782772.1| threonyl-tRNA synthetase [Clostridium botulinum B1 str. Okra] gi|229557978|sp|B1IMV3|SYT_CLOBK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|169119467|gb|ACA43303.1| threonyl-tRNA synthetase [Clostridium botulinum B1 str. Okra] Length = 635 Score = 285 bits (729), Expect = 1e-74, Method: Composition-based stats. Identities = 91/442 (20%), Positives = 158/442 (35%), Gaps = 42/442 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + IH+ G + P G + + + REE + G Sbjct: 231 YLNMLEEAKKRDHRKLGKELDLFS--IHEEGPGFPFFHPKGMIVRNILESFWREEHTKAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW +SG +D Y + M + +D P + ++++ + SY Sbjct: 289 YQEIRTPLILNEALWHQSGHWDHYKENM-YFTNIDDGDYAIKPMNCPGGILVYKNSMHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ + R EL G+MR R F DA+ + + + + + Sbjct: 348 RDLPLRLSELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEVV--GIIKLIDK 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F++L + + P S E + D I Sbjct: 406 FYKLFGFEYFVELSTRPEDSMGSDE-----------------DWEIATNGLKEALDSIGK 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H K R + G I + ++ G Sbjct: 449 EYRVNEGDGAFYGPKIDFHL----------KDCIGRTWQCGTI-QLDFQMPERFDLSYIG 497 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + G++ ++ + G W V +++ D Sbjct: 498 ADGEKHRPVMVHRTIYGSVERFIGILIEQYAGAFPTWLAPVQVKLMNIT------DAQYD 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +K+ L + V D E+IG + A L P +I+G K V KV ++ R Sbjct: 552 YLKKVEETLKENNIRVEIDTRNEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRKD 611 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G +SLEE I + Sbjct: 612 GDLGAISLEEFIEKIKNEIKAK 633 >gi|226950568|ref|YP_002805659.1| threonine--tRNA ligase [Clostridium botulinum A2 str. Kyoto] gi|254783516|sp|C1FKN0|SYT_CLOBJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226841746|gb|ACO84412.1| threonine--tRNA ligase [Clostridium botulinum A2 str. Kyoto] Length = 635 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 91/443 (20%), Positives = 157/443 (35%), Gaps = 41/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L + IH+ G + P G + + + REE + Sbjct: 230 EYLNMIEEAKKRDHRKLGKELDLFS--IHEEGPGFPFFHPKGMIVRNILESFWREEHTKA 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + + LW +SG +D Y + M + +D P + ++++ + S Sbjct: 288 GYQEIRTPLILNEALWHQSGHWDHYKENM-YFTNIDDGDYAIKPMNCPGGILVYKNSMHS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ + R EL G+MR R F DA+ + + + + + Sbjct: 347 YRDLPLRLSELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEIV--GIIKLID 404 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 F++L + + P S E + D I Sbjct: 405 KFYKLFGFEYFVELSTRPEDSMGSDE-----------------DWEIATNGLREALDSIG 447 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H K R + G I + ++ Sbjct: 448 KEYRVNEGDGAFYGPKIDFHL----------KDCIGRTWQCGTI-QLDFQMPERFDLSYI 496 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 GADG+ H + G++ ++ + G W V +++ Sbjct: 497 GADGEKHRPVMVHRTIYGSVERFIGILIEQYAGAFPTWLAPVQVKLMNIT------DSQY 550 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D +K+ L + V D E+IG + A L P +I+G K V KV ++ R Sbjct: 551 DYLKKVEEALKENNIRVEIDTRNEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRK 610 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 G +SLEE I + N Sbjct: 611 DGDLGAISLEEFIEKIKNEIKNK 633 >gi|88608761|ref|YP_506256.1| prolyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama] gi|114152220|sp|Q2GE40|SYP_NEOSM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|88600930|gb|ABD46398.1| prolyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama] Length = 436 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 197/439 (44%), Positives = 280/439 (63%), Gaps = 11/439 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+Y+LP+++ + ++ SHK LR G++ Q G+YSWLPLG K L N+ ++IR+E Sbjct: 6 RVSEYYLPLMKNVSGEVKLRSHKYSLRAGLVKQCGAGLYSWLPLGLKVLRNIESVIRQEL 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G EM +P +Q A LW ESGRY YGKE+L+ DR+D +++GPT+EEV+T I R Sbjct: 66 DSMGMHEMLMPCIQLAKLWEESGRYSDYGKELLKFKDRHDNELLFGPTNEEVITAIVRDD 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SY+ LP Y IQ KFRDE+RPRFG+MR+REFLMKDAYSFD+ + ++ SYNK++ SY Sbjct: 126 LASYKQLPKILYHIQWKFRDEIRPRFGLMRAREFLMKDAYSFDVDQQSARISYNKVYQSY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIV-LADTGETQVFCSKDFMDFPIPSENTDFD 240 LRIF RLGL IP RA +G IGG L+HEF + + GE ++F ++ + D Sbjct: 186 LRIFKRLGLNPIPCRANAGVIGGSLNHEFHITTTEGGEGKIFYPEEMGELVDEFCKIDPS 245 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +++ + E+ + T + ++ + + +N+ +A+GIEVGHIF FG KYS PM A Sbjct: 246 NEHAVSVMTEKLQELFCFTEECNSSGIGN---DNRICTAQGIEVGHIFLFGEKYSAPMQA 302 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 F G DGK MGSYGIG R++AA+IE D KGIIWP+S+APFKI LIN+ Sbjct: 303 RFSGRDGKKKNFYMGSYGIGISRLLAAIIEVHSDDKGIIWPESIAPFKIGLINLHGESCG 362 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 E+I+++L V +DD + G +FA DL+G P Q+IVG +E+K+ Sbjct: 363 ---FAEEIFSKLDS----VIYDDTADSQGVKFARMDLIGVPFQIIVGKNGPIHGTIELKY 415 Query: 421 RLTGIREDMSLEEVINYAS 439 RL RE SL E+++ S Sbjct: 416 RLDSKRESRSLNELVSLFS 434 >gi|307266242|ref|ZP_07547784.1| threonyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1] gi|306918772|gb|EFN49004.1| threonyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1] Length = 634 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 93/442 (21%), Positives = 160/442 (36%), Gaps = 42/442 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + IH G + P G + + R+E + G Sbjct: 230 YLHMLEEAKKRDHRKLGKELDLFS--IHPEGPGFPFFHPKGMIIRNILEDFWRKEHIKHG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + +LW SG +D Y + M + + + P + +++S + SY Sbjct: 288 YQEIKTPIILNEELWRRSGHWDHYKENM-YFTEIDGETYAIKPMNCPGAMLVYKSTMHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R EL G+MR R F DA+ +TPE + + Sbjct: 347 RDLPLRLCELGLVHRHELSGVLHGLMRVRSFTQDDAH-LFMTPEQVEDEILGVINLVDYF 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + + P S E + + + + + Sbjct: 406 YKIFGFEY-FVELSTRPENSMGSDE-----------------DWELATNALISALNRVNL 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H L DS+ R + G I + + G Sbjct: 448 PYKVNEGDGAFYGPKIDFH---LKDSIG-------RTWQCGTI-QLDFQMPERFELEYIG 496 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ ++ G W +AP ++ ++ I Sbjct: 497 PDGEKHRPIMLHRVIYGSIERFIGILTEHFAGAFPTW---LAPVQVRVLPISDKH---YA 550 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + +Y RL + DD E+IG + A L P +IVG K V V ++ R Sbjct: 551 YAQHVYGRLLENDIRAELDDRNEKIGYKIREAQLQKIPYMLIVGDKEVEQGTVSLRSRKE 610 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G +SL E I + Sbjct: 611 GDLGAISLNEFIEKILKEIATK 632 >gi|170759804|ref|YP_001788457.1| threonyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree] gi|238688792|sp|B1L0T7|SYT_CLOBM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|169406793|gb|ACA55204.1| threonine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree] Length = 635 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 91/440 (20%), Positives = 158/440 (35%), Gaps = 42/440 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + IH+ G + P G + + + REE + G Sbjct: 231 YLNMLEEAKKRDHRKLGKELDLFS--IHEEGPGFPFFHPKGMIIRNILESFWREEHTKAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW +SG +D Y + M + +D P + ++++ + SY Sbjct: 289 YQEIRTPLILNEALWHQSGHWDHYKENM-YFTNIDDGDYAIKPMNCPGGILVYKNSMHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ + R EL G+MR R F DA+ + + + + + Sbjct: 348 RDLPLRLSELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEIV--GIIKLIDK 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F++L + + P S E + D I Sbjct: 406 FYKLFGFEYFVELSTRPEDSMGSDE-----------------DWEIATNGLREALDSIGK 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H K R + G I + ++ G Sbjct: 449 EYRVNEGDGAFYGPKIDFHL----------KDCIGRTWQCGTI-QLDFQMPERFDLSYIG 497 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + G++ ++ + G W V +++ D Sbjct: 498 ADGEKHRPVMVHRTIYGSVERFIGILIEQYAGAFPTWLAPVQVKLMNIT------DAQYD 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +K+ L + V D E+IG + A L P +I+G K V KV ++ R Sbjct: 552 YLKKVEEALKENNIRVEIDTRNEKIGYKIREAQLQKIPYMLILGDKEVEAGKVAVRSRKD 611 Query: 424 GIREDMSLEEVINYASHRFS 443 G +SLEE I + Sbjct: 612 GDLGAISLEEFIEKIKNEIK 631 >gi|167040680|ref|YP_001663665.1| threonyl-tRNA synthetase [Thermoanaerobacter sp. X514] gi|307724045|ref|YP_003903796.1| threonyl-tRNA synthetase [Thermoanaerobacter sp. X513] gi|166854920|gb|ABY93329.1| threonyl-tRNA synthetase [Thermoanaerobacter sp. X514] gi|307581106|gb|ADN54505.1| threonyl-tRNA synthetase [Thermoanaerobacter sp. X513] Length = 634 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 92/442 (20%), Positives = 160/442 (36%), Gaps = 42/442 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + IH G + P G + + R+E + G Sbjct: 230 YLHMLEEAKKRDHRKLGKELDLFS--IHPEGPGFPFFHPKGMIIRNILEDFWRKEHIKHG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + +LW SG +D Y + M + + + P + +++S + SY Sbjct: 288 YQEIKTPIILNEELWRRSGHWDHYKENM-YFTEIDGETYAIKPMNCPGAMLVYKSTMHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R EL G+MR R F DA+ +TPE + + Sbjct: 347 RDLPLRLCELGLVHRHELSGVLHGLMRVRSFTQDDAH-LFMTPEQVEDEILGVINLVDYF 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + + P S E + + + + + Sbjct: 406 YKIFGFEY-FVELSTRPENSMGSDE-----------------DWELATNALISALNRVNL 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H L DS+ R + G I + + G Sbjct: 448 PYKVNEGDGAFYGPKIDFH---LKDSIG-------RTWQCGTI-QLDFQMPERFELEYIG 496 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ ++ G W +AP ++ ++ I Sbjct: 497 PDGEKHRPIMLHRVIYGSIERFIGILTEHFAGAFPTW---LAPVQVRVLPISDKH---YA 550 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + +Y RL + DD E++G + A L P +IVG K V V ++ R Sbjct: 551 YAQNVYGRLLENDIRAELDDRNEKVGYKIREAQLQKIPYMLIVGDKEVEQGTVSLRSRKE 610 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G +SL E I + Sbjct: 611 GDLGAISLSEFIEKILKEIATK 632 >gi|187776940|ref|ZP_02993413.1| hypothetical protein CLOSPO_00484 [Clostridium sporogenes ATCC 15579] gi|187775599|gb|EDU39401.1| hypothetical protein CLOSPO_00484 [Clostridium sporogenes ATCC 15579] Length = 635 Score = 283 bits (725), Expect = 3e-74, Method: Composition-based stats. Identities = 91/442 (20%), Positives = 159/442 (35%), Gaps = 42/442 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + IH+ G + P G + + + REE + G Sbjct: 231 YLNMLEEAKKRDHRKLGKELDLFS--IHEEGPGFPFFHPKGMIVRNILESFWREEHTKAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW +SG +D Y + M + +D P + ++++ + SY Sbjct: 289 YQEIRTPLILNEALWHQSGHWDHYKENM-YFTNIDDGDYAIKPMNCPGGILVYKNSMHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ + R EL G+MR R F DA+ + + + + + Sbjct: 348 RDLPLRLSELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEVV--GIIKLIDK 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F++L + + P S E + D I Sbjct: 406 FYKLFGFEYFVELSTRPEDSMGSDE-----------------DWEIATNGLREALDSIGK 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H K R + G I + ++ G Sbjct: 449 EYRVNEGDGAFYGPKIDFHL----------KDCIGRTWQCGTI-QLDFQMPERFDLSYIG 497 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + G++ ++ + G W V +++ D Sbjct: 498 ADGEKHRPVMVHRTIYGSVERFIGILIEQYAGAFPTWLAPVQVKLMNIT------DSQYD 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +K+ L + V D E+IG + A L P +I+G K V KV ++ R Sbjct: 552 YLKKVEETLKENNIRVEIDTRNEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRKD 611 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G +SLEE I + + Sbjct: 612 GDLGAISLEEFIEKIKNEIKDK 633 >gi|297544949|ref|YP_003677251.1| threonyl-tRNA synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842724|gb|ADH61240.1| threonyl-tRNA synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 634 Score = 283 bits (724), Expect = 4e-74, Method: Composition-based stats. Identities = 92/442 (20%), Positives = 160/442 (36%), Gaps = 42/442 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + IH G + P G + + R+E + G Sbjct: 230 YLHMLEEAKKRDHRKLGKELDLFS--IHPEGPGFPFFHPKGMIIRNILEDFWRKEHMKHG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + +LW SG +D Y + M + + + P + +++S + SY Sbjct: 288 YQEIKTPIILNEELWRRSGHWDHYKENM-YFTEIDGETYAIKPMNCPGAMLVYKSTMHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R EL G+MR R F DA+ +TPE + + Sbjct: 347 RDLPLRLCELGLVHRHELSGVLHGLMRVRSFTQDDAH-LFMTPEQVEDEILGVINLVDYF 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + + P S E + + + + + Sbjct: 406 YKIFGFEY-FVELSTRPENSMGSDE-----------------DWELATNALISALNRVNL 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H L DS+ R + G I + + G Sbjct: 448 PYKVNEGDGAFYGPKIDFH---LKDSIG-------RTWQCGTI-QLDFQMPERFELEYIG 496 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ ++ G W +AP ++ ++ I Sbjct: 497 PDGEKHRPIMLHRVIYGSIERFIGILTEHFAGAFPTW---LAPVQVRVLPISDKH---YA 550 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + +Y RL + DD E++G + A L P +IVG K V V ++ R Sbjct: 551 YAQNVYGRLLENDIRAELDDRNEKVGYKIREAQLQKIPYMLIVGDKEVEQGTVSLRSRRE 610 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G +SL E I + Sbjct: 611 GDLGAISLSEFIEKILKEIATK 632 >gi|78044971|ref|YP_360408.1| threonyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901] gi|123770579|sp|Q3ABS6|SYT_CARHZ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|77997086|gb|ABB15985.1| threonyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901] Length = 634 Score = 283 bits (724), Expect = 4e-74, Method: Composition-based stats. Identities = 87/446 (19%), Positives = 150/446 (33%), Gaps = 41/446 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 + Y + + RD +L L + + + G + P G + + RE+ Sbjct: 228 LTDYLNFLEEAKKRDHRKIGQELDLFS--LQEEGPGFPFFHPKGMVIRNELENFWREKHR 285 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P + + +LW SG + Y + M +D+ P + ++++ + Sbjct: 286 LAGYQEIKTPIILNRELWERSGHWAHYKENM-YFTKIDDQDYAIKPMNCPGSILVYKNKL 344 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR P ++ L R EL G+MR R F DA+ F L + ++ Sbjct: 345 HSYREFPIRLAELGLVHRHELSGVLHGLMRVRCFTQDDAHIFMLPEQVKDEII--GVINL 402 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + F+RL + + P S E + S ++ Sbjct: 403 IDEFYRLFGFEYHVELSTRPENSMGSDE-----------------LWELATNSLKEALEE 445 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D H K R + G I + T Sbjct: 446 RGLPYKINEGDGAFYGPKIDFHL----------KDCLGRTWQCGTI-QLDFQMPEKFDLT 494 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G DG+ H + G++ ++ + G +W V I++ + Sbjct: 495 YIGEDGQKHRPVMIHRVVFGSIERFIGILIEHYAGAFPVWLSPVQVRVITVA------ER 548 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 R+ ++IY +L G V DD E IG + + P +IVG K + V ++ Sbjct: 549 HREYGQEIYQKLFNQGVRVELDDRNETIGYKIREGQMQKIPYLLIVGDKEIEQGSVAVRK 608 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R G E I R Sbjct: 609 RGVGDLGQKPFAEFIEELLAEIREKR 634 >gi|153938058|ref|YP_001392415.1| threonyl-tRNA synthetase [Clostridium botulinum F str. Langeland] gi|166223335|sp|A7GI05|SYT_CLOBL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|152933954|gb|ABS39452.1| threonine--tRNA ligase [Clostridium botulinum F str. Langeland] gi|295320405|gb|ADG00783.1| threonine--tRNA ligase [Clostridium botulinum F str. 230613] Length = 635 Score = 282 bits (722), Expect = 6e-74, Method: Composition-based stats. Identities = 91/443 (20%), Positives = 157/443 (35%), Gaps = 41/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L + IH+ G + P G + + + RE+ + Sbjct: 230 EYLNMIEEAKKRDHRKLGKELDLFS--IHEEGPGFPFFHPKGMIVRNILESFWREKHTKA 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + + LW +SG +D Y + M + +D P + +++S + S Sbjct: 288 GYQEIRTPLILNEALWHQSGHWDHYKENM-YFTNIDDGDYAIKPMNCPGGILVYKSSMHS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ + R EL G+MR R F DA+ + + + + + Sbjct: 347 YRDLPLRLSELGIVHRHELSGALHGLMRVRCFTQDDAHLYMTKEQIKEEVI--GIIKLID 404 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 F++L + + P S E + D I Sbjct: 405 EFYKLFGFEYFVELSTRPEDSMGSDE-----------------DWEIATNGLREALDSIG 447 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H K R + G I + ++ Sbjct: 448 KEYRVNEGDGAFYGPKIDFHL----------KDCIGRTWQCGTI-QLDFQMPERFDLSYI 496 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 GADG+ H + G++ ++ + G W V +++ Sbjct: 497 GADGEKHRPVMVHRTIYGSVERFIGILIEQYAGAFPTWLAPVQVKLMNIT------DSQY 550 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D +K+ L + V D E+IG + A L P +I+G K V KV ++ R Sbjct: 551 DYLKKVEETLKENNIRVEIDTRNEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRK 610 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 G +SLEE I + N Sbjct: 611 DGDLGAISLEEFIEKIKNEIKNK 633 >gi|256751279|ref|ZP_05492159.1| threonyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1] gi|256749834|gb|EEU62858.1| threonyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1] Length = 634 Score = 282 bits (722), Expect = 7e-74, Method: Composition-based stats. Identities = 92/442 (20%), Positives = 160/442 (36%), Gaps = 42/442 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + IH G + P G + + R+E + G Sbjct: 230 YLHMLEEAKKRDHRKLGKELDLFS--IHPEGPGFPFFHPKGMIIRNILEDFWRKEHMKHG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + +LW SG +D Y + M + + + P + +++S + SY Sbjct: 288 YQEIKTPIILNEELWRRSGHWDHYKENM-YFTEIDGETYAIKPMNCPGAMLVYKSTMHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R EL G+MR R F DA+ +TPE + + Sbjct: 347 RDLPLRLCELGLVHRHELSGVLHGLMRVRSFTQDDAH-LFMTPEQVEDEILGVINLVDYF 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + + P S E + + + + + Sbjct: 406 YKIFGFEY-FVELSTRPENSMGSDE-----------------DWELATNALISALNRVNL 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H L DS+ R + G I + + G Sbjct: 448 PYKVNEGDGAFYGPKIDFH---LKDSIG-------RTWQCGTI-QLDFQMPERFELEYIG 496 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ ++ G W +AP ++ ++ I Sbjct: 497 PDGEKHRPIMLHRVIYGSIERFIGILTEHFAGAFPTW---LAPVQVRVLPISDKH---YA 550 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + +Y RL + DD E++G + A L P +IVG K V V ++ R Sbjct: 551 YAQNVYGRLLENDIRAELDDRNEKVGYKIREAQLQKIPYMLIVGDKEVEQGTVSLRSRKE 610 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G +SL E I + Sbjct: 611 GDLGAISLNEFIEKILKEIATK 632 >gi|167037181|ref|YP_001664759.1| threonyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320115599|ref|YP_004185758.1| threonyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856015|gb|ABY94423.1| threonyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319928690|gb|ADV79375.1| threonyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 634 Score = 282 bits (722), Expect = 7e-74, Method: Composition-based stats. Identities = 92/442 (20%), Positives = 160/442 (36%), Gaps = 42/442 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + IH G + P G + + R+E + G Sbjct: 230 YLHMLEEAKKRDHRKLGKELDLFS--IHPEGPGFPFFHPKGMIIRNILEDFWRKEHMKHG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + +LW SG +D Y + M + + + P + +++S + SY Sbjct: 288 YQEIKTPIILNEELWRRSGHWDHYKENM-YFTEIDGETYAIKPMNCPGAMLVYKSTMHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R EL G+MR R F DA+ +TPE + + Sbjct: 347 RDLPLRLCELGLVHRHELSGVLHGLMRVRSFTQDDAH-LFMTPEQVEDEILGVINLVDYF 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + + P S E + + + + + Sbjct: 406 YKIFGFEY-FVELSTRPENSMGSDE-----------------DWELATNALISALNRVNL 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H L DS+ R + G I + + G Sbjct: 448 PYKVNEGDGAFYGPKIDFH---LKDSIG-------RTWQCGTI-QLDFQMPERFELEYIG 496 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ ++ G W +AP ++ ++ I Sbjct: 497 PDGEKHRPIMLHRVIYGSIERFIGILTEHFAGAFPTW---LAPVQVRVLPISDKH---YA 550 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + +Y RL + DD E++G + A L P +IVG K V V ++ R Sbjct: 551 YAQNVYGRLLENDIRAELDDRNEKVGYKIREAQLQKIPYMLIVGDKEVEQGTVSLRSRKE 610 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G +SL E I + Sbjct: 611 GDLGAISLSEFIEKILKEIATK 632 >gi|227498537|ref|ZP_03928681.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226903993|gb|EEH89911.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 636 Score = 282 bits (721), Expect = 8e-74, Method: Composition-based stats. Identities = 83/445 (18%), Positives = 157/445 (35%), Gaps = 42/445 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD +L L M+ + G +LP G + + RE + Sbjct: 231 EAYLHMLEEAEKRDHRKLGKQLGLF--MLSDYGPGFPFFLPNGMILRNELINYWREVHRK 288 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+S P + + LW SG +D Y + M + + P + ++ S Sbjct: 289 YNYYEVSTPMIMNRQLWETSGHWDHYKENM-YFTKIDGEDYAIKPMNCPGGMLVYDSEPH 347 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP ++ L R EL G+ R R F DA+ F + P + + + Sbjct: 348 SYRDLPLRVGELGLVHRHELSGALHGLFRVRCFTQDDAHIF-MMPNQIEDVIQETIRLFD 406 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ GL T + + DD Sbjct: 407 EVYATFGLTY------------------HAELSTRPDNSMGDDATWEMTTNALRKAMDDF 448 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + E A Y D H L DS+ + +++ F + T+ Sbjct: 449 GLKYVVNEGDGAFYGPKIDFH---LKDSIGRTWQCGTIQLDMLLPEKF--------NLTY 497 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DG+ H + G++ ++ + +P +AP ++ ++ I Sbjct: 498 TGEDGQKHRPVMIHRVVYGSIERFIGILI---ENYAGAFPAWLAPEQVRVMPITDK---F 551 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + + ++ +G DD E+IG + + P ++VG K ++ V ++ R Sbjct: 552 NEYAKSVVDKMEALGIRAHLDDRNEKIGYKIREGQVKKVPYMLVVGEKEATNGTVSVRSR 611 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 G M+++E I + Sbjct: 612 SEGEMGAMAVDEFIAKLQKEIKEKK 636 >gi|303242609|ref|ZP_07329085.1| threonyl-tRNA synthetase [Acetivibrio cellulolyticus CD2] gi|302589866|gb|EFL59638.1| threonyl-tRNA synthetase [Acetivibrio cellulolyticus CD2] Length = 635 Score = 281 bits (719), Expect = 2e-73, Method: Composition-based stats. Identities = 89/442 (20%), Positives = 159/442 (35%), Gaps = 41/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L I++ G ++P G + + REE G Sbjct: 231 YLFRLEEAKKRDHRKLGKELDLFD--IYEEGPGFPFFMPKGMMLRNLLENYWREEHKARG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + DLW SG +D Y + M ++ P + +++ + SY Sbjct: 289 YQEIRTPIILNEDLWHRSGHWDHYKENM-YFTKIDEGDYAIKPMNCPGGMLVYKRKLHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R EL G+MR R F DA+ F +TPE K + Sbjct: 348 RDLPQRMAELGLVHRHELSGALHGLMRVRCFTQDDAHIF-MTPEQIKDEVLGVINLIDDF 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 ++ G K + + P S E + + D Sbjct: 407 YNVFGFKYH-VELSTRPEDSMGSDE-----------------QWEMATNALRDALDARKM 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H E DS+ + ++ F ++ + G Sbjct: 449 NYKVNEGDGAFYGPKIDFHLE---DSIGRTWQCGTIQLD----FQMPQRFD----LNYVG 497 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + G++ A++ G W ++P ++ ++ + Sbjct: 498 ADGEKHRPVMIHRVVFGSIERFIAILTEHFAGAFPTW---LSPVQVKILPLIDKHH---Q 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ A L G V D E+IG + A L P +++G K + + V ++ R Sbjct: 552 FAGEVKAALEAKGVRVEVDLRNEKIGYKIREAQLEKTPYMLVIGDKELENGAVAVRSRKD 611 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G M+L + +N + Sbjct: 612 GDLGSMALNDFVNKIVEEVESK 633 >gi|300914721|ref|ZP_07132037.1| Threonyl/alanyl tRNA synthetase SAD [Thermoanaerobacter sp. X561] gi|300889656|gb|EFK84802.1| Threonyl/alanyl tRNA synthetase SAD [Thermoanaerobacter sp. X561] Length = 634 Score = 281 bits (718), Expect = 2e-73, Method: Composition-based stats. Identities = 91/442 (20%), Positives = 160/442 (36%), Gaps = 42/442 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + IH G + P G + + R+E + G Sbjct: 230 YLHMLEEAKKRDHRKLGKELDLFS--IHPEGPGFPFFHPKGMIIRNILEDFWRKEHIKHG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + +LW SG +D Y + M + + + P + +++S + SY Sbjct: 288 YQEIKTPIILNEELWRRSGHWDHYKENM-YFTEIDGETYAIKPMNCPGAMLVYKSTMHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R EL G+MR R F DA+ +TPE + + Sbjct: 347 RDLPLRLCELGLVHRHELSGVLHGLMRVRSFTQDDAH-LFMTPEQVEDEILGVINLVDYF 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + + P S E + + + + + Sbjct: 406 YKIFGFEY-FVELSTRPENSMGSDE-----------------DWELATNALISALNRVNL 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H L DS+ R + G I + + G Sbjct: 448 PYKVNEGDGAFYGPKIDFH---LKDSIG-------RTWQCGTI-QLDFQMPERFELEYIG 496 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ ++ G W +AP ++ ++ I Sbjct: 497 PDGEKHRPIMLHRVIYGSIERFIGILTEHFAGAFPTW---LAPVQVRVLPISDKH---YA 550 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + +Y RL + D+ E++G + A L P +IVG K V V ++ R Sbjct: 551 YAQNVYGRLLENDIRAELDERNEKVGYKIREAQLQKIPYMLIVGDKEVEQGTVSLRSRKE 610 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G +SL E I + Sbjct: 611 GDLGAISLSEFIEKILKEIATK 632 >gi|225181661|ref|ZP_03735101.1| threonyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1] gi|225167642|gb|EEG76453.1| threonyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1] Length = 636 Score = 280 bits (717), Expect = 3e-73, Method: Composition-based stats. Identities = 92/450 (20%), Positives = 168/450 (37%), Gaps = 44/450 (9%) Query: 2 RRSKY--FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 +RS+ +L L+E RD +L L + I G P G + + R Sbjct: 225 KRSQLDEYLHRLEEAKKRDHRKLGRELDLFS--IQDEGPGFPLLHPRGMIIRNALEEFWR 282 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 EE + G E+ P + + LW SG +D Y + M +++ P + ++ Sbjct: 283 EEHRKAGYDEIKTPIILNRVLWERSGHWDHYQENM-YFTKIDEQDFSVKPMNCPGSMLVY 341 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++ + SYR+LP ++ L R EL G+MR R F DA+ F L P K K+ Sbjct: 342 KTKMHSYRDLPVRMGELGLVHRHELSGTLHGMMRVRAFTQDDAHIFML-PSQIKEEVAKV 400 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 R+++ G ++ V T + S + D + Sbjct: 401 IELTDRVYNVFG------------------FDYHVELSTKPEKAMGSDEMWDVATNALRE 442 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 ++ I E A Y D H L DS+ + ++ F K+ + Sbjct: 443 VLEERGMQFVINEGDGAFYGPKIDFH---LQDSIGRTWQCGTIQLD----FQMPEKFDIH 495 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + G DG+ H + G++ AV+ + +P +AP ++ ++ I Sbjct: 496 ----YVGEDGQKHRPAVIHRVIYGSIERFMAVLI---EHFAGAFPVWLAPQQVVVLPITD 548 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + R + G D E+IG + A + P ++VG K + +V Sbjct: 549 KHH---QYAQTLVERFREAGVRAEADVRNEKIGYKIREAQVQKVPYMLVVGDKEMEAGQV 605 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNNR 446 ++ R G M ++ + + +N + Sbjct: 606 SVRERAAGDVGSMEVDAFLAKITAEIANKQ 635 >gi|291559712|emb|CBL38512.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [butyrate-producing bacterium SSC/2] Length = 641 Score = 280 bits (716), Expect = 4e-73, Method: Composition-based stats. Identities = 95/442 (21%), Positives = 163/442 (36%), Gaps = 41/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L M+ + G +LP G + + RE + G Sbjct: 230 YLTMMEEARKRDHRKLGKELGLF--MMREEGPGFPFFLPKGMVLKNTLLDYWREIHQKAG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+S P + S LW SG +D Y + M +D+ P + ++ S +SY Sbjct: 288 YVEISTPIMLSRHLWETSGHWDHYKENMYT-TVIDDQDFAIKPMNCPGGVLVYDSEPRSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R E + G+MR R F DA+ F +TP+ K + ++ Sbjct: 347 RDLPLRMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIF-MTPDQIKDEIKGVAGLIDQV 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 ++ G K + + P S E + S DD+ Sbjct: 406 YNLFGFKYH-VELSTRPDDSMGSDE-----------------DWELATDSLRAALDDLGL 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H E DS+ + ++ F ++ L + G Sbjct: 448 DYVVNEGDGAFYGPKIDFHLE---DSIGRTWQCGTIQLD----FQLPLRFDLH----YTG 496 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + G++ ++ G W +AP ++ +I I D Sbjct: 497 ADGEKHRPIMIHRVAFGSIERFIGILIEHFAGAFPTW---LAPVQVEVIPISDKH---LD 550 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L G D E++G + A L P ++VG K + V ++ R Sbjct: 551 YANKVLDTLKAAGIRADIDTRAEKMGYKIREAQLQKIPYMLVVGGKEEENGAVSVRSRFK 610 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G M L++ + +N Sbjct: 611 GDEGQMKLDDFLAAIKEEIANR 632 >gi|302389962|ref|YP_003825783.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646] gi|302200590|gb|ADL08160.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646] Length = 637 Score = 280 bits (715), Expect = 4e-73, Method: Composition-based stats. Identities = 89/443 (20%), Positives = 158/443 (35%), Gaps = 41/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L + +H+ G + P G + + R+E + Sbjct: 233 EYLKKLEEAKKRDHRKLGKELGLFS--MHEEGPGFPFFHPKGMVLWNTLIDFWRKEHQKR 290 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + + +LW SG +D Y M + + P + +++S + S Sbjct: 291 GYQEIKTPIILNEELWKRSGHWDHYKTNM-YFTQIDGEGYAIKPMNCPGGILVYKSDVHS 349 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP ++ L R EL G+MR R F DA+ + + + + + + Sbjct: 350 YRELPLKLAELGLVHRHELSGVLHGLMRVRSFTQDDAHIYMMPSQIEQEILEVI--NLAD 407 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 +R+ + + P E + + D Sbjct: 408 HIYRIFGFDYHVELSTRPENSMGPDE-----------------LWERATAALKNALDKKG 450 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E A Y D H L DS+ R + G I T+ Sbjct: 451 LPYRINEGDGAFYGPKIDFH---LKDSIG-------RTWQCGTI-QLDFMMPERFDLTYI 499 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG+ H + G++ ++ + +P +AP ++ ++ I + Sbjct: 500 GPDGEKHRPVMIHRTIFGSLERFIGILI---EHYAGAFPVWLAPIQVKVLPI---SEKFM 553 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D K+ A L V D+ E+IG + A L P +IVG K ++ V ++ R Sbjct: 554 DYARKVTAELENSDIRVELDERNEKIGYKIREAQLQKIPYMLIVGEKEAAEGTVSVRVRE 613 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 G SL++ I + R N Sbjct: 614 KGDVGMKSLKDFIEEVTTRIKNK 636 >gi|147678291|ref|YP_001212506.1| threonyl-tRNA synthetase [Pelotomaculum thermopropionicum SI] gi|146274388|dbj|BAF60137.1| threonyl-tRNA synthetase [Pelotomaculum thermopropionicum SI] Length = 640 Score = 279 bits (713), Expect = 7e-73, Method: Composition-based stats. Identities = 88/443 (19%), Positives = 152/443 (34%), Gaps = 41/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L + IH G + P G + + REE + Sbjct: 235 EYLFRLEEAKRRDHRKLGAELDLFS--IHDEGPGFPFFHPKGMILRNELEKFWREEHQKR 292 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + S +LW SG ++ Y + M +D P + I+++ + S Sbjct: 293 GYQEIRTPVILSRNLWERSGHWEHYRENM-YFTRIDDGDYAVKPMNCPGSILIYKNRLHS 351 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP ++ L R EL G+MR R F DA+ F L P K + Sbjct: 352 YRELPIRLAELGLVHRHELSGVLHGLMRVRCFTQDDAHIFML-PSQVKEEIIGVIELVDD 410 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + G V T + S + + + + Sbjct: 411 FYRVFGFPY------------------HVELSTRPEKAMGSDETWEMATGALRDALEARG 452 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H L DSL + ++ F K+ T+ Sbjct: 453 LDYRVNEGDGAFYGPKIDFH---LQDSLGRTWQCGTIQLD----FLMPEKFD----LTYI 501 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG+ H + G++ ++ + +P +AP ++ ++ I Sbjct: 502 GEDGQKHRPVMIHRVVFGSIERFIGILT---EHFAGAFPAWLAPVQVRVLPIADRHAG-- 556 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 K+ L+ G D E+IG + A P ++ G K + V ++HR Sbjct: 557 -YARKVLDCLTGAGIRAELDARNEKIGYKIREAQAQKIPYMLVTGDKEAENGTVAVRHRT 615 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 TG + L ++ + Sbjct: 616 TGDMGAIPLGGFVDKLLDEIKSK 638 >gi|289578715|ref|YP_003477342.1| threonyl-tRNA synthetase [Thermoanaerobacter italicus Ab9] gi|289528428|gb|ADD02780.1| threonyl-tRNA synthetase [Thermoanaerobacter italicus Ab9] Length = 635 Score = 279 bits (713), Expect = 7e-73, Method: Composition-based stats. Identities = 93/443 (20%), Positives = 160/443 (36%), Gaps = 43/443 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + IH G + P G + + R+E + G Sbjct: 230 YLHMLEEAKKRDHRKLGKELDLFS--IHPEGPGFPFFHPKGMIIRNILEDFWRKEHMKHG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + +LW SG +D Y + M + + + P + +++S + SY Sbjct: 288 YQEIKTPIILNEELWRRSGHWDHYKENM-YFTEIDGETYAIKPMNCPGAMLVYKSTMHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R EL G+MR R F DA+ +TPE + + Sbjct: 347 RDLPLRLCELGLVHRHELSGVLHGLMRVRSFTQDDAH-LFMTPEQVEDEILGVINLVDYF 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + + P S E + + + + + Sbjct: 406 YKIFGFEY-FVELSTRPENSMGSDE-----------------DWELATNALISALNRVNL 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H L DS+ R + G I + + G Sbjct: 448 PYKVNEGDGAFYGPKIDFH---LKDSIG-------RTWQCGTI-QLDFQMPERFELEYIG 496 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ ++ G W +AP ++ ++ I Sbjct: 497 PDGEKHRPIMLHRVIYGSIERFIGILTEHFAGAFPTW---LAPVQVRVLPISDKH---YA 550 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL-LGFPLQVIVGSKFVSDSKVEIKHRL 422 + +Y RL + DD E+IG + A L P +IVG K V V ++ R Sbjct: 551 YAQNVYGRLLENDIRAELDDRNEKIGYKIREAQLQKKIPYMLIVGDKEVEQGTVSLRSRK 610 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 G +SL E I + Sbjct: 611 EGDLGAISLSEFIEKILKEIATK 633 >gi|266620391|ref|ZP_06113326.1| threonine--tRNA ligase [Clostridium hathewayi DSM 13479] gi|288868018|gb|EFD00317.1| threonine--tRNA ligase [Clostridium hathewayi DSM 13479] Length = 633 Score = 279 bits (713), Expect = 8e-73, Method: Composition-based stats. Identities = 90/443 (20%), Positives = 162/443 (36%), Gaps = 41/443 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L T M G +LP G + + RE R G Sbjct: 230 YLTRIEEAKKRDHRKLGKELGLFTIM--DEGPGFPFFLPKGMVLKNALTNFWREIHEREG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E++ P + + LW SG +D Y + M +D P + +++S +SY Sbjct: 288 YVEIATPIMLNRSLWETSGHWDHYKENMYTTT-IDDTEFAIKPMNCPGSMLVYKSQPRSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R E G+MR R F DA+ + + + + + Sbjct: 347 RDLPLRMGELGLVHRHEKSGALHGLMRVRCFTQDDAHIYMTPEQITDE-IKGVVRLIDEV 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 ++ G K + + P S E + S D++ Sbjct: 406 YNMFGFKYH-VELSTRPEDSMGSDE-----------------DWEMATNSLREALDEMGY 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D H E DSL + ++ F ++ A + G Sbjct: 448 DYIINEGDGAFYGPKIDFHLE---DSLGRTWQCGTIQLD----FQLPLRF----EAEYTG 496 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + +G++ ++ + +P +AP ++ ++ I + Sbjct: 497 ADGEKHRPIMIHRVLLGSIERFIGILI---EHYAGKFPAWLAPVQVKVLPISDKNA---A 550 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + +Y L K D+ E+IG + A L P ++ G+K + V +++R + Sbjct: 551 YAKDVYNTLKKNHIRCEIDERPEKIGYKIREAQLEKVPYMLVAGAKEEENHTVAVRYRDS 610 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 G MS+E+ + Sbjct: 611 GENVTMSVEDFAEMLKKEIEERK 633 >gi|326795752|ref|YP_004313572.1| threonyl-tRNA synthetase [Marinomonas mediterranea MMB-1] gi|326546516|gb|ADZ91736.1| threonyl-tRNA synthetase [Marinomonas mediterranea MMB-1] Length = 638 Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats. Identities = 81/442 (18%), Positives = 147/442 (33%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L I + RD KL L + + + G+ W P G + V +R++Q Sbjct: 232 YLLRIEEAEKRDHRKLGKKLDLF--HVQEEAPGMVFWHPKGWRLYQAVEQYMRQKQLDNN 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG + Y + M ++ P + ++ +KSY Sbjct: 290 YQEVKTPQIVDRVLWEKSGHWGKYQENMFT-THSENRDYAVKPMNCPCHIQVYNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LPF + R+E G+MR R F+ D + F T + ++ + Sbjct: 349 RDLPFRMAEFGSCHRNEPSGALHGIMRVRNFVQDDGHIFV-TENQIQSEVSEFIKLLHEV 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G +I R + P S E A+ +P E Sbjct: 408 YADFGFDNIIYRLSTRPEQRVGSDEVWDKAEKALADALDVAGLEWEELPGE--------- 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D++ + ++ G A + Sbjct: 459 --------GAFYGPKIEF---SLKDAIGRVWQCGTIQVDFSMPTRLG--------AQYVS 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + +G++ ++ +G +W +++ + Sbjct: 500 EDGSRQTPVMLHRAIVGSLERFIGILIEETEGSFPLWLAPEQVVIMNIT------DRQTE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 CE + L+ G D E+IG + L P ++VG K V + KV ++ R Sbjct: 554 YCENLEKTLNSNGFRAKLDLRNEKIGFKIREHTLQRIPYLIVVGDKEVENGKVAVRTRSG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS+ E + + Sbjct: 614 EDLGVMSVNEFEDLLRDEVARR 635 >gi|167570156|ref|ZP_02363030.1| threonyl-tRNA synthetase [Burkholderia oklahomensis C6786] Length = 635 Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 149/443 (33%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L I + S G+ W P G V +R + G Sbjct: 231 YLHMLEEAEKRDHRKLGKQLDLF--HIQEESPGMVFWHPKGWTLWQQVEQYMRRRLDAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + + P + +F+ ++SY Sbjct: 289 YLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAVKPMNCPGHVQVFKHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ DA+ F + + + + + Sbjct: 348 RDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQINSEAIAFN-KLAMSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P S E A+ G + + +P E Sbjct: 407 YEDFGFDRIDIKLSLRPEQRMGSDETWDHAEDGLRKALKACGVEWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + +++ G A + Sbjct: 458 --------GAFYGPKIEYH---IKDALGRSWQCGTLQLDMMLPERLG--------AEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G W +++ + + Sbjct: 499 EDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPAWLAPAHAVVLNIA------ESQVE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L K G V D E+I + L P ++VG K V ++ R Sbjct: 553 YAQTVAQSLQKQGLRVSADLRNEKISYKIREHTLEKVPYLLVVGDKEREAQTVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 M +E + + Sbjct: 613 VDLGVMPVEAFVERLREDIQAFK 635 >gi|167562968|ref|ZP_02355884.1| threonyl-tRNA synthetase [Burkholderia oklahomensis EO147] Length = 635 Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 149/443 (33%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L I + S G+ W P G V +R + G Sbjct: 231 YLHMLEEAEKRDHRKLGKQLDLF--HIQEESPGMVFWHPKGWTLWQQVEQYMRRRLDAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + + P + +F+ ++SY Sbjct: 289 YLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAVKPMNCPGHVQVFKHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ DA+ F + + + + + Sbjct: 348 RDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQINSEAIAFN-KLAMSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P S E A+ G + + +P E Sbjct: 407 YEDFGFDRIDIKLSLRPEQRMGSDETWDHAEDGLRKALKACGVEWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + +++ G A + Sbjct: 458 --------GAFYGPKIEYH---IKDALGRSWQCGTLQLDMMLPERLG--------AEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G W +++ + + Sbjct: 499 EDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPAWLAPAHAVVLNIA------ESQVE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L K G V D E+I + L P ++VG K V ++ R Sbjct: 553 YAQTVAQSLQKQGLRVSADLRNEKISYKIREHTLEKVPYLLVVGDKEREAQTVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 M +E + + Sbjct: 613 VDLGVMPVEAFVERLREDIQAFK 635 >gi|78066086|ref|YP_368855.1| threonyl-tRNA synthetase [Burkholderia sp. 383] gi|123756187|sp|Q39H55|SYT_BURS3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|77966831|gb|ABB08211.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Burkholderia sp. 383] Length = 635 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 149/442 (33%), Gaps = 39/442 (8%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + S G+ W P G V +R N G Sbjct: 231 YLHMLEEAEKRDHRKLGKQLDLF--HMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + + P + +F+ ++SY Sbjct: 289 YLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFKHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ DA+ F + S + + Sbjct: 348 RDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNT-LAMSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P + E A+ G + +P E Sbjct: 407 YKDFGFDHIDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLTWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + +++ G +Y Sbjct: 458 --------GAFYGPKIEYH---IKDALGRSWQCGTLQLDMVLPERLGAEY-------VAD 499 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + V + +G+M ++ H G W +++ + + Sbjct: 500 DSSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPAWLAPFQAVVLNIA------ESQAEY 553 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + L K G V D E+I + L P ++VG K V ++ R Sbjct: 554 AQSLAQSLQKQGVRVTADLRNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRARGGV 613 Query: 425 IREDMSLEEVINYASHRFSNNR 446 M +E + + + Sbjct: 614 DLGVMPVEAFVERLQEDLRSFK 635 >gi|167769368|ref|ZP_02441421.1| hypothetical protein ANACOL_00694 [Anaerotruncus colihominis DSM 17241] gi|167668336|gb|EDS12466.1| hypothetical protein ANACOL_00694 [Anaerotruncus colihominis DSM 17241] Length = 635 Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats. Identities = 83/449 (18%), Positives = 160/449 (35%), Gaps = 44/449 (9%) Query: 2 RRSKY--FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 + S+ +L +L+E R D +L L I++ G + P G + + + R Sbjct: 224 KASELSDYLHMLEEAKRRDHRKLGRELDLFD--IYEEGPGFPFFFPKGMILRNLLESFWR 281 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 EE + G E+ P + + +LW SG +D Y M +D+ P + ++ Sbjct: 282 EEHQKHGYQEIRTPLILNEELWHRSGHWDHYKDNMYT-TKIDDRDYAIKPMNCPGGILVY 340 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + + SYR+LP ++ + R EL G+MR R F DA+ F +TP+ + + Sbjct: 341 KRRMNSYRDLPQRLAELGIVHRHELSGALHGLMRVRCFTQDDAHIF-MTPDQIEAEVLGV 399 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 I+ G + + P S E + + Sbjct: 400 INLIDSIYRVFGFDYF-LELSTRPEDSMGSEE-----------------QWETATAALRK 441 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 +D ++ E A Y D H L DS+ + ++ F ++ Sbjct: 442 ALEDNGRPYTVNEGDGAFYGPKIDFH---LRDSIGRTWQCGTIQLD----FQMPERFD-- 492 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + G+DG+ H + G++ ++ + G +W V + + Sbjct: 493 --LAYIGSDGERHRPVMVHRTAFGSIERFIGILIEHYAGAFPLWLAPVQIKVLPVT---- 546 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + L++ G + D E++G + A L P +++G K +V Sbjct: 547 --DEHIPYAQSVADTLTRAGLRIELDSRNEKVGYRIREAQLQKIPYMLVLGGKEAESGEV 604 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ R G M L + + Sbjct: 605 AVRDRRDGKTTTMLLADFVEKMKTEVETK 633 >gi|332798664|ref|YP_004460163.1| threonyl-tRNA synthetase [Tepidanaerobacter sp. Re1] gi|332696399|gb|AEE90856.1| threonyl-tRNA synthetase [Tepidanaerobacter sp. Re1] Length = 636 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 90/436 (20%), Positives = 162/436 (37%), Gaps = 41/436 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L + IH+ G + P G + + R+E ++ Sbjct: 232 EYLTRIEEAKRRDHRKLGKELDLFS--IHEEGPGFPFFHPKGMIIWNLLTDFWRKEHSKR 289 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + + +LW SG +D Y + M +D P + ++++ +S Sbjct: 290 GYQEIKTPIILNEELWRRSGHWDHYKENM-YFTKIDDMNYAVKPMNCPGGILMYKTDSRS 348 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ L R EL G+MR R F DA+ F + P + + Sbjct: 349 YRDLPIRLGELGLVHRHELSGVLHGLMRVRCFTQDDAHIF-MMPSQIEDEIIGVIDLVDY 407 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + G + + + P S E D + D Sbjct: 408 FYQIFGFEYN-VELSTRPENSMGSDE-----------------LWDQATAALQGALDKKG 449 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E A Y D H L DSL + ++ F ++ ++ Sbjct: 450 MSYKINEGDGAFYGPKIDFH---LKDSLGRTWQCGTIQLD----FQMPERFD----LSYI 498 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 GADG+ H + G++ ++ + +P +AP + ++ I + Sbjct: 499 GADGEKHRPVMIHRVIFGSIERFIGILI---EHYAGAFPVWLAPVQARVLPI---SEKHM 552 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D K+ +L + G V D+ E+IG + A + P +IVG K +++ V ++ R Sbjct: 553 DYAYKVKKQLEEAGIRVEVDERNEKIGYKVRDAQMKKIPYMLIVGDKEANENTVSVRTRE 612 Query: 423 TGIREDMSLEEVINYA 438 G +E I+ Sbjct: 613 KGDVGQKPIETFIDEV 628 >gi|83719712|ref|YP_443111.1| threonyl-tRNA synthetase [Burkholderia thailandensis E264] gi|167620276|ref|ZP_02388907.1| threonyl-tRNA synthetase [Burkholderia thailandensis Bt4] gi|123767616|sp|Q2SVD8|SYT_BURTA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|83653537|gb|ABC37600.1| threonyl-tRNA synthetase [Burkholderia thailandensis E264] Length = 635 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 78/443 (17%), Positives = 148/443 (33%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L I + + G+ W P G V +R + G Sbjct: 231 YLHMLEEAEKRDHRKLGKQLDLF--HIQEEAPGMVFWHPKGWTLWQRVEQYMRRRLDAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + + P + +F+ ++SY Sbjct: 289 YLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFKHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ DA+ F + + + + + Sbjct: 348 RDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQINSEAIAFN-KLAMSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P S E A+ G + +P E Sbjct: 407 YEDFGFDRIDIKLSLRPEQRMGSDETWDHAEEGLRNALKACGLEWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + +++ G A + Sbjct: 458 --------GAFYGPKIEYH---IKDALGRSWQCGTLQLDMMLPERLG--------AEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G W +++ + + Sbjct: 499 EDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPAWLAPFHAVVLNIA------ESQAE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L K G V D E+I + L P ++VG K V ++ R Sbjct: 553 YAQTVVQSLQKQGLRVSADLRNEKISYKIREHTLEKVPYLLVVGDKEREAQTVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 M +E + + Sbjct: 613 VDLGVMPVEAFVERLREDIQAFK 635 >gi|300856610|ref|YP_003781594.1| threonyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528] gi|300436725|gb|ADK16492.1| threonyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528] Length = 637 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 82/442 (18%), Positives = 162/442 (36%), Gaps = 41/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + IH+ G + P G + + R+ ++ G Sbjct: 231 YLTMMEEAKKRDHRKLGKELDLFS--IHEEGPGFPFFHPKGMIIRNELQNYWRQVHHKAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + +LW +SG +D Y + M +D+ P + ++++ I SY Sbjct: 289 YDEIMTPIILNEELWHQSGHWDHYKENM-YFTKIDDEDYAIKPMNCPGSILVYKNKIHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + ++ + R E G+MR R F DA+ F N + + Sbjct: 348 RDLPIRYGEMGIVHRHEKSGALHGLMRVRCFTQDDAHIFMTKDNMKDEIVNVIK--LIDS 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F+++ + + P S E + + Sbjct: 406 FYKVFKFEYFVELSTRPEDSMGSDE-----------------DWEAATEGLKDALKAVGL 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H L DS+ + ++ F ++ T+ G Sbjct: 449 DYKVNEGDGAFYGPKIDFH---LKDSIGRTWQCGTVQLD----FQMPERFD----LTYVG 497 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + G++ ++ + +P +AP ++ ++NI D Sbjct: 498 ADGEKHRPVMVHRVVFGSIERFIGILI---ENYAGAFPAWLAPVQVEVMNIT---DAQDD 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L + V D E+IG + A + P +++G K + D + ++ R Sbjct: 552 YVNEVVEKLKENDIRVESDMRNEKIGYKIREAQMQKVPYMIVLGEKEMKDKTISVRSRKG 611 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G M+L++ I+ Sbjct: 612 GDMGTMALDDFISKLKDEIDKK 633 >gi|255526047|ref|ZP_05392970.1| threonyl-tRNA synthetase [Clostridium carboxidivorans P7] gi|255510233|gb|EET86550.1| threonyl-tRNA synthetase [Clostridium carboxidivorans P7] Length = 638 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 83/440 (18%), Positives = 153/440 (34%), Gaps = 42/440 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + +H+ G + P G + + RE + Sbjct: 231 YLNMLEEAKKRDHRKLGKELDLFS--MHEEGPGFPFFHPKGMIIRNTLQNFWREMHSAAD 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW +SG +D Y + M +++ P + ++++ I SY Sbjct: 289 YDEIMTPVILNEKLWRQSGHWDHYKENM-YFTKIDNEDYAIKPMNCPGSILVYKNTIHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + ++ L R E G+MR R F DA+ F + N + + Sbjct: 348 RELPLRYAEMGLAHRHEKSGALHGLMRVRCFTQDDAHMFLAKDNITDEIVNVIK--LIDD 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F+++ + + P S E + D I Sbjct: 406 FYKVFGFEYFVELSTRPEDSMGSDE-----------------DWEAATNGLRKALDTIGL 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H + R + G + + T+ G Sbjct: 449 KYKVNEGDGAFYGPKIDFHL----------RDCIGRTWQCGTV-QLDFQMPERFDLTYIG 497 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + G++ ++ + G W V +++ D Sbjct: 498 ADGEKHRPVMVHRVVFGSVERFIGILIEHYAGAFPAWLAPVQVKIMNIT------DDQID 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D E+IG + A L P +++G K + ++ V ++ R Sbjct: 552 YANKVAKELKKNKIRVEVDLRNEKIGYKIREAQLQKVPYMLVLGDKEMKENTVAVRSRKL 611 Query: 424 GIREDMSLEEVINYASHRFS 443 G M+L++ + Sbjct: 612 GDLGAMALDQFVEKIKGEID 631 >gi|323704478|ref|ZP_08116056.1| threonyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11] gi|323535940|gb|EGB25713.1| threonyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11] Length = 634 Score = 277 bits (708), Expect = 3e-72, Method: Composition-based stats. Identities = 88/441 (19%), Positives = 159/441 (36%), Gaps = 40/441 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + IH G + P G + + R+E + G Sbjct: 230 YLNMLEEAKKRDHRKLGKELDLFS--IHNEGPGFPFFHPKGMILRNILEDFWRKEHAKRG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + +LW SG +D Y + M +D+ P + ++ S + SY Sbjct: 288 YQEIKTPIILNEELWHRSGHWDHYKENM-YFTKIDDEDYAIKPMNCPGALLVYNSTMHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R EL G+MR R F DA+ +TP+ + + Sbjct: 347 RDLPLRLCELGLVHRHELSGALHGLMRVRSFTQDDAH-LFMTPDQVESEILGVIKLIDYF 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + + P S E + + + I Sbjct: 406 YKIFGFEY-FVELSTRPENSIGSDE-----------------DWELATNALIKAMEHIGL 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H L DS+ + ++ F +++ Sbjct: 448 NYKVNEGDGAFYGPKIDFH---LKDSIGRTWQCGTIQLD----FQMPERFNCEY---VGD 497 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 K V + G++ A++ + +P +AP ++ ++ I Sbjct: 498 DGEKHRPVMLHRVVFGSIERFIAILT---ENFAGAFPTWLAPVQVKILPISDKH---LAY 551 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + I+ RL + V DD E+IG + A + P +I+G K V V ++ R G Sbjct: 552 AQNIHERLLENDIRVELDDRNEKIGYKIREAQMQKIPYMLILGDKEVEAGNVSVRSRKEG 611 Query: 425 IREDMSLEEVINYASHRFSNN 445 SL+E ++ Sbjct: 612 DLGSKSLQEFLSSILEEIKQK 632 >gi|53719558|ref|YP_108544.1| threonyl-tRNA synthetase [Burkholderia pseudomallei K96243] gi|53725296|ref|YP_102787.1| threonyl-tRNA synthetase [Burkholderia mallei ATCC 23344] gi|76810857|ref|YP_333290.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1710b] gi|121600801|ref|YP_992866.1| threonyl-tRNA synthetase [Burkholderia mallei SAVP1] gi|124385818|ref|YP_001026205.1| threonyl-tRNA synthetase [Burkholderia mallei NCTC 10229] gi|126441516|ref|YP_001058752.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 668] gi|126449349|ref|YP_001080524.1| threonyl-tRNA synthetase [Burkholderia mallei NCTC 10247] gi|126453502|ref|YP_001066005.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1106a] gi|134282197|ref|ZP_01768902.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 305] gi|167003090|ref|ZP_02268880.1| threonine--tRNA ligase [Burkholderia mallei PRL-20] gi|167719848|ref|ZP_02403084.1| threonyl-tRNA synthetase [Burkholderia pseudomallei DM98] gi|167738851|ref|ZP_02411625.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 14] gi|167816071|ref|ZP_02447751.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 91] gi|167824445|ref|ZP_02455916.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 9] gi|167845979|ref|ZP_02471487.1| threonyl-tRNA synthetase [Burkholderia pseudomallei B7210] gi|167894556|ref|ZP_02481958.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 7894] gi|167902959|ref|ZP_02490164.1| threonyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177] gi|167911196|ref|ZP_02498287.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 112] gi|167919220|ref|ZP_02506311.1| threonyl-tRNA synthetase [Burkholderia pseudomallei BCC215] gi|217423341|ref|ZP_03454842.1| threonine--tRNA ligase [Burkholderia pseudomallei 576] gi|226199711|ref|ZP_03795264.1| threonine--tRNA ligase [Burkholderia pseudomallei Pakistan 9] gi|237812016|ref|YP_002896467.1| threonine--tRNA ligase [Burkholderia pseudomallei MSHR346] gi|238562605|ref|ZP_04610138.1| threonine--tRNA ligase [Burkholderia mallei GB8 horse 4] gi|242317788|ref|ZP_04816804.1| threonine--tRNA ligase [Burkholderia pseudomallei 1106b] gi|254177492|ref|ZP_04884147.1| threonyl-tRNA synthetase [Burkholderia mallei ATCC 10399] gi|254180004|ref|ZP_04886603.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1655] gi|254188582|ref|ZP_04895093.1| threonyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237] gi|254197889|ref|ZP_04904311.1| threonyl-tRNA synthetase [Burkholderia pseudomallei S13] gi|254199739|ref|ZP_04906105.1| threonyl-tRNA synthetase [Burkholderia mallei FMH] gi|254206061|ref|ZP_04912413.1| threonyl-tRNA synthetase [Burkholderia mallei JHU] gi|254259413|ref|ZP_04950467.1| threonine--tRNA ligase [Burkholderia pseudomallei 1710a] gi|254297839|ref|ZP_04965292.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 406e] gi|254358432|ref|ZP_04974705.1| threonyl-tRNA synthetase [Burkholderia mallei 2002721280] gi|73919776|sp|Q62KI2|SYT_BURMA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|73919777|sp|Q63TM2|SYT_BURPS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123771913|sp|Q3JT13|SYT_BURP1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166223324|sp|A3MJT8|SYT_BURM7 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166223325|sp|A2S2N6|SYT_BURM9 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166223326|sp|A1V3R3|SYT_BURMS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166223327|sp|A3NUI4|SYT_BURP0 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166223328|sp|A3N8T1|SYT_BURP6 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|52209972|emb|CAH35944.1| threonyl-tRNA synthetase [Burkholderia pseudomallei K96243] gi|52428719|gb|AAU49312.1| threonyl-tRNA synthetase [Burkholderia mallei ATCC 23344] gi|76580310|gb|ABA49785.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1710b] gi|121229611|gb|ABM52129.1| threonyl-tRNA synthetase [Burkholderia mallei SAVP1] gi|124293838|gb|ABN03107.1| threonine--tRNA ligase [Burkholderia mallei NCTC 10229] gi|126221009|gb|ABN84515.1| threonine--tRNA ligase [Burkholderia pseudomallei 668] gi|126227144|gb|ABN90684.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1106a] gi|126242219|gb|ABO05312.1| threonine--tRNA ligase [Burkholderia mallei NCTC 10247] gi|134246235|gb|EBA46324.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 305] gi|147749335|gb|EDK56409.1| threonyl-tRNA synthetase [Burkholderia mallei FMH] gi|147753504|gb|EDK60569.1| threonyl-tRNA synthetase [Burkholderia mallei JHU] gi|148027559|gb|EDK85580.1| threonyl-tRNA synthetase [Burkholderia mallei 2002721280] gi|157806992|gb|EDO84162.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 406e] gi|157936261|gb|EDO91931.1| threonyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237] gi|160698531|gb|EDP88501.1| threonyl-tRNA synthetase [Burkholderia mallei ATCC 10399] gi|169654630|gb|EDS87323.1| threonyl-tRNA synthetase [Burkholderia pseudomallei S13] gi|184210544|gb|EDU07587.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1655] gi|217393199|gb|EEC33220.1| threonine--tRNA ligase [Burkholderia pseudomallei 576] gi|225928297|gb|EEH24331.1| threonine--tRNA ligase [Burkholderia pseudomallei Pakistan 9] gi|237505158|gb|ACQ97476.1| threonine--tRNA ligase [Burkholderia pseudomallei MSHR346] gi|238522290|gb|EEP85735.1| threonine--tRNA ligase [Burkholderia mallei GB8 horse 4] gi|242141027|gb|EES27429.1| threonine--tRNA ligase [Burkholderia pseudomallei 1106b] gi|243061341|gb|EES43527.1| threonine--tRNA ligase [Burkholderia mallei PRL-20] gi|254218102|gb|EET07486.1| threonine--tRNA ligase [Burkholderia pseudomallei 1710a] Length = 635 Score = 277 bits (708), Expect = 3e-72, Method: Composition-based stats. Identities = 78/443 (17%), Positives = 148/443 (33%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L I + + G+ W P G V +R + G Sbjct: 231 YLHMLEEAEKRDHRKLGKQLDLF--HIQEEAPGMVFWHPKGWTLWQQVEQYMRRRLDAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + + P + +F+ ++SY Sbjct: 289 YLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFKHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ DA+ F + + + + + Sbjct: 348 RDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQINSEAIAFN-KLAMSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P S E A+ G + +P E Sbjct: 407 YEDFGFDRIDIKLSLRPEQRMGSDETWDHAEEGLRNALKACGLEWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + +++ G A + Sbjct: 458 --------GAFYGPKIEYH---IKDALGRSWQCGTLQLDMMLPERLG--------AEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G +W +++ + + Sbjct: 499 EDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVWLAPAHAVVLNIA------ESQAE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + L K G V D E+I + L P ++VG K V ++ R Sbjct: 553 YARTVAQSLQKQGLRVSADLRNEKISYKIREHTLEKVPYLLVVGDKEREAQTVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 M +E + + Sbjct: 613 VDLGVMPVEAFVERLREDIQAFK 635 >gi|317499591|ref|ZP_07957854.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA] gi|316893140|gb|EFV15359.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA] Length = 641 Score = 277 bits (708), Expect = 3e-72, Method: Composition-based stats. Identities = 95/442 (21%), Positives = 163/442 (36%), Gaps = 41/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L M+ + G +LP G + + RE + G Sbjct: 230 YLTMMEEARKRDHRKLGKELGLF--MMREEGPGFPFFLPKGMVLKNTLLDYWREIHQKAG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+S P + S LW SG +D Y + M +D+ P + ++ S +SY Sbjct: 288 YVEISTPIMLSRHLWETSGHWDHYKENMYT-TVIDDQDFAIKPMNCPGGVLVYDSEPRSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R E + G+MR R F DA+ F +TP+ K + ++ Sbjct: 347 RDLPLRMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIF-MTPDQIKDEIKGVAGLIDQV 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 ++ G K + + P S E + S DD+ Sbjct: 406 YNLFGFKYH-VELSTRPDDSMGSDE-----------------DWELATDSLRAALDDLGL 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H E DS+ + ++ F ++ L + G Sbjct: 448 DYVVNEGDGAFYGPKIDFHLE---DSIGRTWQCGTIQLD----FQLPLRFDLH----YTG 496 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + G++ ++ G W +AP ++ +I I D Sbjct: 497 ADGEKHRPIMIHRVAFGSIERFIGILIEHFAGAFPTW---LAPVQVEVIPISDKH---LD 550 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L G D E++G + A L P ++VG K + V ++ R Sbjct: 551 YANKVLDTLKAAGIRADIDTRAEKMGYKIREAQLQKIPYMLVVGGKEEENEAVSVRSRFK 610 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G M L++ + +N Sbjct: 611 GDEGQMKLDDFLAAIKEEIANR 632 >gi|167766936|ref|ZP_02438989.1| hypothetical protein CLOSS21_01453 [Clostridium sp. SS2/1] gi|167710911|gb|EDS21490.1| hypothetical protein CLOSS21_01453 [Clostridium sp. SS2/1] Length = 645 Score = 277 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 95/442 (21%), Positives = 164/442 (37%), Gaps = 41/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L M+ + G +LP G + + RE + G Sbjct: 234 YLTMMEEARKRDHRKLGKELGLF--MMREEGPGFPFFLPKGMVLKNTLLDYWREIHQKAG 291 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+S P + S LW SG +D Y + M +D+ P + ++ S +SY Sbjct: 292 YVEISTPIMLSRHLWETSGHWDHYKENMYT-TVIDDQDFAIKPMNCPGGVLVYDSEPRSY 350 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R E + G+MR R F DA+ F +TP+ K + ++ Sbjct: 351 RDLPLRMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIF-MTPDQIKDEIKGVAGLIDQV 409 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 ++ G K + + P S E + S DD+ Sbjct: 410 YNLFGFKYH-VELSTRPDDSMGSDE-----------------DWELATDSLRAALDDLGL 451 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H E DS+ + ++ F ++ L + G Sbjct: 452 DYVVNEGDGAFYGPKIDFHLE---DSIGRTWQCGTIQLD----FQLPLRFDLH----YTG 500 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + G++ ++ G W +AP ++ +I I D Sbjct: 501 ADGEKHRPIMIHRVAFGSIERFIGILIEHFAGAFPTW---LAPVQVEVIPISDKH---LD 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L G D E++G + A L P ++VG K + V ++ R Sbjct: 555 YANKVLDTLKAAGIRADIDTRAEKMGYKIREAQLQKIPYMLVVGGKEEENEAVSVRSRFK 614 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G M L++ ++ +N Sbjct: 615 GDEGQMKLDDFLDAIKEEIANR 636 >gi|302871393|ref|YP_003840029.1| threonyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47] gi|302574252|gb|ADL42043.1| threonyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47] Length = 639 Score = 277 bits (707), Expect = 4e-72, Method: Composition-based stats. Identities = 98/449 (21%), Positives = 169/449 (37%), Gaps = 44/449 (9%) Query: 2 RRSKY--FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 ++S+ +L +L+E RD +L L I G +LP G + + R Sbjct: 227 KKSQLDEYLTMLEEAKKRDHRKLGRELDLFD--IFDEGPGFPFFLPKGMIIRNILEDFWR 284 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 EE R G E+ P + + DLW++SG +D Y + M +D+ P + ++ Sbjct: 285 EEHKRRGYQEIKTPIMLTKDLWIQSGHWDHYKENM-YFTKIDDQEFAIKPMNCPGSILVY 343 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + SYR LP ++ L R EL G+MR R F DA+ F L P K + Sbjct: 344 KRKSHSYRELPQRLCELGLVHRHELSGVLHGLMRVRCFTQDDAHIFML-PSQIKDEIKGV 402 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 + G K + + P + E +A+T + Sbjct: 403 IDLIDYFYSVFGFKYH-VELSTRPENSMGTDEQWNMAET-----------------ALKE 444 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 +++ I E A Y D H E DSL + + ++ F ++ Sbjct: 445 ALEEVGINYKINEGDGAFYGPKIDFHLE---DSLKRTWQCATIQLD----FQMPERFD-- 495 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + G DG H + G++ A++ + +P +AP +I +I + Sbjct: 496 --LYYIGEDGAKHRPVMLHRVVFGSIERFIAILT---EHFAGAFPVWLAPTQIRVIPVSD 550 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + D KI L + G V D E +G + A L P VIVG K ++ + Sbjct: 551 N---FNDYAAKISQTLKENGFRVEEDYRSETVGYKIRDAQLQKIPYMVIVGEKEQKENTI 607 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ R G +++E ++ + Sbjct: 608 AVRDRKKGDLGSFTIDEFVSMVKEKVEKK 636 >gi|325528727|gb|EGD05797.1| threonyl-tRNA synthetase [Burkholderia sp. TJI49] Length = 635 Score = 277 bits (707), Expect = 4e-72, Method: Composition-based stats. Identities = 80/443 (18%), Positives = 150/443 (33%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + S G+ W P G V +R N G Sbjct: 231 YLHMLEEAEKRDHRKLGKQLDLF--HMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + + P + +F+ ++SY Sbjct: 289 YLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFKHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ DA+ F + S + + Sbjct: 348 RDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQFIAESIAFNT-LAMSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ P + E A+ G + +P E Sbjct: 407 YKDFGFEHIDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLSWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + +++ G A + Sbjct: 458 --------GAFYGPKIEYH---IKDALGRSWQCGTLQLDMVLPERLG--------AEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G W + +++ + D Sbjct: 499 EDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPAWLAPIQVVVMNIA------ESQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L K G V D E+I + L P ++VG K V ++ R Sbjct: 553 YAQSLAQTLQKQGVRVTADLRNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 M +E + + + Sbjct: 613 VDLGVMPVEAFVERLQEDLRSFK 635 >gi|221197733|ref|ZP_03570779.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD2M] gi|221204709|ref|ZP_03577726.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD2] gi|221175566|gb|EEE07996.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD2] gi|221181665|gb|EEE14066.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD2M] Length = 635 Score = 277 bits (707), Expect = 4e-72, Method: Composition-based stats. Identities = 80/443 (18%), Positives = 151/443 (34%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + S G+ W P G V +R N G Sbjct: 231 YLHMLEEAEKRDHRKLGKQLDLF--HMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + + P + +F+ ++SY Sbjct: 289 YLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFKHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ DA+ F + S + + Sbjct: 348 RDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQFIAESIAFNT-LAMSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ P + E A+ G + +P E Sbjct: 407 YKDFGFEHIDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLSWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + +++ G A + Sbjct: 458 --------GAFYGPKIEYH---IKDALGRSWQCGTLQLDMVLPERLG--------AEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G +W V +++ + + Sbjct: 499 EDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVWLAPVQAVVLNIA------ESQVE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L K G V D E+I + L P ++VG K V ++ R Sbjct: 553 YAQSLAQTLQKQGVRVTADLRNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 M +E + + + Sbjct: 613 VDLGVMPIEAFVERLQEDLRSFK 635 >gi|167582118|ref|ZP_02374992.1| threonyl-tRNA synthetase [Burkholderia thailandensis TXDOH] Length = 635 Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats. Identities = 78/443 (17%), Positives = 149/443 (33%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L I + + G+ W P G V +R + G Sbjct: 231 YLHMLEEAEKRDHRKLGKQLDLF--HIQEEAPGMVFWHPKGWTLWQQVEQYMRRRLDAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + + P + +F+ ++SY Sbjct: 289 YLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFKHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ DA+ F + + + + + Sbjct: 348 RDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQINSEAIAFN-KLAMSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P S E A+ G + +P E Sbjct: 407 YEDFGFDRIDIKLSLRPEQRMGSDETWDHAEEGLRNALKACGLEWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + +++ G A + Sbjct: 458 --------GAFYGPKIEYH---IKDALGRSWQCGTLQLDMMLPERLG--------AEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G +W +++ + + Sbjct: 499 EDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVWLAPFHAVVLNIA------ESQAE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L K G V D E+I + L P ++VG K V ++ R Sbjct: 553 YAQTVVQSLQKQGLRVSADLRNEKISYKIREHTLEKVPYLLVVGDKEREAQTVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 M +E + + Sbjct: 613 IDLGVMPVEAFVERLREDIQAFK 635 >gi|206559848|ref|YP_002230612.1| threonyl-tRNA synthetase [Burkholderia cenocepacia J2315] gi|238693072|sp|B4E7I6|SYT_BURCJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|198035889|emb|CAR51780.1| threonyl-tRNA synthetase [Burkholderia cenocepacia J2315] Length = 635 Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 149/443 (33%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + S G+ W P G V +R N G Sbjct: 231 YLHMLEEAEKRDHRKLGKQLDLF--HMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + + P + +F+ ++SY Sbjct: 289 YLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFKHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ DA+ F + S + + Sbjct: 348 RDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNT-LAMSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P + E A+ G + +P E Sbjct: 407 YKDFGFDHIDIKLSLRPDQRAGTDETWDRAEQGLRDALTACGLTWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + +++ G A + Sbjct: 458 --------GAFYGPKIEYH---IKDALGRSWQCGTLQLDMVLPERLG--------AEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G +W +++ + + Sbjct: 499 EDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVWLAPYQAIVLNIA------ESQAE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L K G V D E+I + L P ++VG K V ++ R Sbjct: 553 YAQSLAQSLQKQGVRVAADLRNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 M +E + + + Sbjct: 613 VDLGVMPVEAFVERLQEDLRSFK 635 >gi|221214904|ref|ZP_03587872.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD1] gi|221165131|gb|EED97609.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD1] Length = 635 Score = 276 bits (706), Expect = 5e-72, Method: Composition-based stats. Identities = 80/443 (18%), Positives = 151/443 (34%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + S G+ W P G V +R N G Sbjct: 231 YLHMLEEAEKRDHRKLGKQLDLF--HMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + + P + +F+ ++SY Sbjct: 289 YLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFKHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ DA+ F + S + + Sbjct: 348 RDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQFIAESIAFNT-LAMSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ P + E A+ G + +P E Sbjct: 407 YKDFGFEHIDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLSWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + +++ G A + Sbjct: 458 --------GAFYGPKIEYH---IKDALGRSWQCGTLQLDMVLPERLG--------AEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G +W V +++ + + Sbjct: 499 EDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVWLAPVQAVVLNIA------ESQVE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L K G V D E+I + L P ++VG K V ++ R Sbjct: 553 YAQSLAQTLQKQGVRVTADLRNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 M +E + + + Sbjct: 613 VDLGVMPVEAFVERLQEDLRSFK 635 >gi|304317243|ref|YP_003852388.1| threonyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778745|gb|ADL69304.1| threonyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 634 Score = 276 bits (705), Expect = 5e-72, Method: Composition-based stats. Identities = 91/442 (20%), Positives = 161/442 (36%), Gaps = 42/442 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + IH G + P G + + R+E + G Sbjct: 230 YLNMLEEAKKRDHRKLGKELDLFS--IHNEGPGFPFFHPKGMVIRNILEDFWRKEHAKRG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + + +LW SG +D Y + M + + P + ++ S + SY Sbjct: 288 YLEIKTPIILNEELWHRSGHWDHYKENM-YFTKIDGEDYAIKPMNCPGALLVYNSTMHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R EL G+MR R F DA+ +TP+ + + Sbjct: 347 RDLPLRLCELGLVHRHELSGALHGLMRVRSFTQDDAH-LFMTPDQVESEILGVIKLIDYF 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + P S E + + + I Sbjct: 406 YKIFGFDY-FVELSTRPENSIGSDE-----------------DWELATNALIKAMEHIGL 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H L DS+ R + G I + + + G Sbjct: 448 DYKVNEGDGAFYGPKIDFH---LKDSIG-------RTWQCGTI-QLDFQMPERFNCEYVG 496 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ A++ + +P +AP ++ ++ I Sbjct: 497 QDGEKHRPVMLHRVVFGSIERFIAILT---ENFAGAFPTWLAPVQVRILPISDKH---LA 550 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + I RL + V DD E+IG + A + P +I+G K V V ++ R Sbjct: 551 YAQNIQQRLLENDIRVELDDRNEKIGYKIREAQMQKIPYMLILGDKEVESGNVSVRSRKD 610 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G S++E ++ N Sbjct: 611 GDIGSKSMQEFLSSILEEIKNK 632 >gi|161524952|ref|YP_001579964.1| threonyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|189350300|ref|YP_001945928.1| threonyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|238687005|sp|A9ABF9|SYT_BURM1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|160342381|gb|ABX15467.1| threonyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|189334322|dbj|BAG43392.1| threonyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] Length = 635 Score = 276 bits (705), Expect = 6e-72, Method: Composition-based stats. Identities = 81/443 (18%), Positives = 151/443 (34%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + S G+ W P G V +R N G Sbjct: 231 YLHMLEEAEKRDHRKLGKQLDLF--HMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + + P + +F+ ++SY Sbjct: 289 YLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFKHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ DA+ F + S + + Sbjct: 348 RDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQIIAESIAFN-KLAMSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P S E A+ G + + +P E Sbjct: 407 YRDFGFDHIDIKLSLRPEQRMGSDETWDRAEQGLREALTACGLQWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + +++ G A + Sbjct: 458 --------GAFYGPKIEYH---IKDALGRSWQCGTLQLDMMLPERLG--------AEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G +W V +++ + + Sbjct: 499 EDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVWLAPVQAVVLNIA------ESQVE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L K G V D E+I + L P ++VG K V ++ R Sbjct: 553 YAQSLAQTLQKQGLRVTADLRNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 M +E + + + Sbjct: 613 VDLGVMPVEAFVERLQEDLRSFK 635 >gi|238027731|ref|YP_002911962.1| threonyl-tRNA synthetase [Burkholderia glumae BGR1] gi|237876925|gb|ACR29258.1| Threonyl-tRNA synthetase [Burkholderia glumae BGR1] Length = 635 Score = 276 bits (705), Expect = 6e-72, Method: Composition-based stats. Identities = 82/442 (18%), Positives = 151/442 (34%), Gaps = 39/442 (8%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD + +L L + + S G+ W P G V +R N G Sbjct: 231 YLHMLEEAEKRDHRKLAKQLDLF--HMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + + P + +F ++SY Sbjct: 289 YLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFNHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ DA+ F + S + + Sbjct: 348 RDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFIAESIAFN-ELAMSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P + E A+ G + +P E Sbjct: 407 YKDFGFDQISIKLSLRPDQRAGTDETWDRAEQGLRDALTACGLAWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + +++ G +Y Sbjct: 458 --------GAFYGPKIEYH---IKDALGRSWQCGTLQLDMVLPERLGAEY-------VAE 499 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 +G+ V + +G+M ++ H G W V +++ + D Sbjct: 500 DNGRRRPVMLHRAIVGSMERFLGILIEHHAGAMPAWLAPVQAIVMNIA------ENQADY 553 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + L K G V D E+I + L P ++VG K V ++ R Sbjct: 554 AGSLAQSLQKQGLRVEADLRNEKISYKIREHALEKVPYLLVVGDKEREAQTVAVRARGGV 613 Query: 425 IREDMSLEEVINYASHRFSNNR 446 M +E + + + Sbjct: 614 ELGVMPVEAFVEHLQQDLRAFK 635 >gi|153835364|ref|ZP_01988031.1| threonyl-tRNA synthetase [Vibrio harveyi HY01] gi|148868112|gb|EDL67276.1| threonyl-tRNA synthetase [Vibrio harveyi HY01] Length = 642 Score = 276 bits (705), Expect = 6e-72, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 145/442 (32%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ +R + + G Sbjct: 234 LTRLEEAAKRDHRKLGKQLDLF--HMQQEAPGMVFWHHNGWSIFRDLEVFVRSKLDEYGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLIMDRVLWERSGHWDKYADAMFT-TSSENREYALKPMNCPGHVQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFC-TESQIQEEVTNCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +I ++ + P S E D + + + Sbjct: 410 QTFGFDNIVVKLSTRPEKRVGSDE-----------------IWDQSEEALKQSLESMEIP 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y + L+D L + ++ G AT+ G Sbjct: 453 YEIQEGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLDFNLPGRLG--------ATYVGE 501 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + + V + +G++ ++ + G W +++ D Sbjct: 502 NNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAILMNIT------DKQSDY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ +L K G D E+IG + L P ++VG + + ++ ++ R Sbjct: 556 VQEVVQKLQKSGIRAKADLRNEKIGFKIREHTLKRVPYMLVVGDQEMEAGEIAVRTRKGK 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 +++ I Y S+ + Sbjct: 616 DLGKFKVDDFIAYIQDEISSRK 637 >gi|170732802|ref|YP_001764749.1| threonyl-tRNA synthetase [Burkholderia cenocepacia MC0-3] gi|238688618|sp|B1K091|SYT_BURCC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|169816044|gb|ACA90627.1| threonyl-tRNA synthetase [Burkholderia cenocepacia MC0-3] Length = 635 Score = 276 bits (705), Expect = 7e-72, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 149/443 (33%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + S G+ W P G V +R N G Sbjct: 231 YLHMLEEAEKRDHRKLGKQLDLF--HMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + + P + +F+ ++SY Sbjct: 289 YLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFKHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ DA+ F + S + + Sbjct: 348 RDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNT-LAMSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P + E A+ G + +P E Sbjct: 407 YKDFGFDHIDIKLSLRPDQRAGTDETWARAEQGLRDALTACGLTWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + +++ G A + Sbjct: 458 --------GAFYGPKIEYH---IKDALGRSWQCGTLQLDMVLPERLG--------AEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G +W +++ + + Sbjct: 499 EDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVWLAPYQAIVLNIA------ESQAE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L K G V D E+I + L P ++VG K V ++ R Sbjct: 553 YAQSLTQTLQKQGVRVAADLRNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 M +E + + + Sbjct: 613 VDLGVMPVEAFVERLQEDLRSFK 635 >gi|269963856|ref|ZP_06178168.1| threonyl-tRNA synthetase [Vibrio harveyi 1DA3] gi|269831343|gb|EEZ85490.1| threonyl-tRNA synthetase [Vibrio harveyi 1DA3] Length = 655 Score = 275 bits (704), Expect = 7e-72, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 145/442 (32%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ IR + + G Sbjct: 247 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSVFRDLEVFIRSKLDEYGY 304 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 305 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYR 363 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + Sbjct: 364 DLPLRMAEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFC-TESQIQEEVTNCIKMVYDTY 422 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +I ++ + P S E D + + + Sbjct: 423 QTFGFDNIVVKLSTRPEKRVGSDE-----------------IWDQSEEALKQSLESMEIP 465 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y + L+D L + ++ G AT+ G Sbjct: 466 YEIQEGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLDFNLPGRLG--------ATYVGE 514 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + + V + +G++ ++ + G W +++ + Sbjct: 515 NNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAILMNIT------DKQSEY 568 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ +L K G D E+IG + L P ++VG + + ++ ++ R Sbjct: 569 VQEVVQKLQKSGIRAKADLRNEKIGFKIREHTLKRVPYMLVVGDQEMEAGEIAVRTRKGK 628 Query: 425 IREDMSLEEVINYASHRFSNNR 446 +++ I Y S+ + Sbjct: 629 DLGKFKVDDFIAYIQDEISSRK 650 >gi|254252558|ref|ZP_04945876.1| Threonyl-tRNA synthetase [Burkholderia dolosa AUO158] gi|124895167|gb|EAY69047.1| Threonyl-tRNA synthetase [Burkholderia dolosa AUO158] Length = 635 Score = 275 bits (704), Expect = 7e-72, Method: Composition-based stats. Identities = 78/443 (17%), Positives = 151/443 (34%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + S G+ W P G V +R N G Sbjct: 231 YLHMLEEAEKRDHRKLGKQLDLF--HMQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + + P + +F+ ++SY Sbjct: 289 YLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFKHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ DA+ F + S + + Sbjct: 348 RDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQFIAESIAFNT-LAMSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ P + E A+ G + +P E Sbjct: 407 YKDFGFEHIDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLSWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + +++ G A + Sbjct: 458 --------GAFYGPKIEYH---IKDALGRSWQCGTLQLDMVLPERLG--------AEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G +W + +++ + + Sbjct: 499 EDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVWLAPIQAVVLNIA------ESQAE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L K G V D E+I + L P ++VG K V ++ R Sbjct: 553 YAQSLAQTLQKQGVRVTADLRNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 M ++ + + + Sbjct: 613 VDLGVMPVDAFVERLQEDLRSFK 635 >gi|260777881|ref|ZP_05886774.1| threonyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450] gi|260605894|gb|EEX32179.1| threonyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450] Length = 642 Score = 275 bits (704), Expect = 9e-72, Method: Composition-based stats. Identities = 76/443 (17%), Positives = 137/443 (30%), Gaps = 42/443 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ IR + + G Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSIFRDLEVFIRAKLDEYGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFC-TESQIQEEVTSCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +I ++ + P S E D + + + Sbjct: 410 QTFGFDNIVVKLSTRPEKRVGSDE-----------------IWDQSEEALKQSLEAMNIE 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + E A Y + L D L + ++ G AT+ Sbjct: 453 YELQEGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFNLPGRLG--------ATYVDE 501 Query: 306 DGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + M I R + +IE A D Sbjct: 502 NNERQVPVMIHRAILGSLERFIGILIEEYFGFFPTWLSPEQAVIMNIT-------DKQSD 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L K G D E+IG + L P ++ G + + ++ ++ R Sbjct: 555 YAQEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTRKG 614 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 +++ I+Y S+ + Sbjct: 615 KDLGKFKVDDFISYIQDEISSRK 637 >gi|158321007|ref|YP_001513514.1| threonyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs] gi|158141206|gb|ABW19518.1| threonyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs] Length = 636 Score = 275 bits (704), Expect = 9e-72, Method: Composition-based stats. Identities = 83/442 (18%), Positives = 151/442 (34%), Gaps = 41/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + + + G + P G + + REE + G Sbjct: 234 LNRLEEAKKRDHRKLGKELDLFS--LQEEGPGFPFFHPRGMVLRNALENFWREEHVKRGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + + LW +SG +D Y + M +D P + ++ SYR Sbjct: 292 DEIKTPIILNEKLWRQSGHWDHYQENM-YFTKIDDGDYAIKPMNCPGSILMYNRKKHSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 + P ++ + R EL G+MR R F DA+ F L + + + ++ Sbjct: 351 DFPIRMGELGIVHRHELSGALHGLMRVRNFTQDDAHLFVLPEQIKEE-IIGIIDFVDYVY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + G K + P + E + I S D+ Sbjct: 410 NIFGFKYHI-ELSTRPENSMGTDE-----------------EWELAIGSLKGALDEKELS 451 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y D H E R + G I + + GA Sbjct: 452 YKINEGDGAFYGPKIDFHLED----------CIGRTWQCGTI-QLDFQMPQRFDMNYVGA 500 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG++H + G++ A++ + +P +AP ++ ++ I + Sbjct: 501 DGENHRPIMLHRVIFGSVERFIAILI---EHYAGKFPAWLAPIQVQILPIADKHH---EY 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 K+ + G V D E+IG + A L P +++G K + +V ++ R G Sbjct: 555 AIKLEREMKARGIRVEVDSRNEKIGYKIREAQLSKVPYMLVIGDKEMEAGEVAVRSRDRG 614 Query: 425 IREDMSLEEVINYASHRFSNNR 446 + +E I + Sbjct: 615 EVGAVKVESFIEDLVQEIKEKK 636 >gi|134299469|ref|YP_001112965.1| threonyl-tRNA synthetase [Desulfotomaculum reducens MI-1] gi|189083605|sp|A4J4Y7|SYT_DESRM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|134052169|gb|ABO50140.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Desulfotomaculum reducens MI-1] Length = 635 Score = 275 bits (703), Expect = 1e-71, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 153/441 (34%), Gaps = 41/441 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 I + RD +L L + I + G + P G + + R+E + G Sbjct: 232 LFRIEEAKRRDHRKLGQELDLFS--IQEEGPGFPFFHPKGMVLRNELENFWRQEHKKRGY 289 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + + +W +SG + Y M ++ P + ++++ + SYR Sbjct: 290 QEIRTPIILNRSMWEQSGHWAHYKDNM-YFTKIDEADYAVKPMNCPGSILVYKTRMHSYR 348 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + ++ L R EL G+MR R F DA+ F L P K + + + Sbjct: 349 DLPLRWGELGLVHRHELSGALHGLMRVRCFTQDDAHIFML-PSQIKDEIIGVIDLFDYFY 407 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + GL + + P S E + S + Sbjct: 408 NTFGLNYH-VELSTRPEKSMGSDE-----------------MWEVATNSLRDALEAKKMD 449 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + E A Y D H L DSL R + G I + + + G Sbjct: 450 YKVNEGDGAFYGPKIDFH---LTDSLG-------RTWQCGTI-QLDFQMPERFNLNYVGE 498 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H + G++ ++ + +P +AP ++ ++ I + Sbjct: 499 DGQKHRPVMIHRVVFGSIERFIGILT---EHFAGAFPVWLAPVQVKVLPITDRHH---EY 552 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ RL + V D E+I + A P +++G + + V ++ R G Sbjct: 553 ARELVKRLQGLDIRVELDARNEKINYKIREAQTQKIPYMLVIGDREMEQGAVAVRERGKG 612 Query: 425 IREDMSLEEVINYASHRFSNN 445 +S+ + I N Sbjct: 613 DVGAISVGDFIKKIEDDIQNK 633 >gi|162218055|ref|YP_620875.2| threonyl-tRNA synthetase [Burkholderia cenocepacia AU 1054] gi|162227933|ref|YP_835120.2| threonyl-tRNA synthetase [Burkholderia cenocepacia HI2424] gi|254245609|ref|ZP_04938930.1| Threonyl-tRNA synthetase, class IIa [Burkholderia cenocepacia PC184] gi|124870385|gb|EAY62101.1| Threonyl-tRNA synthetase, class IIa [Burkholderia cenocepacia PC184] Length = 635 Score = 275 bits (703), Expect = 1e-71, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 149/443 (33%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + S G+ W P G V +R N G Sbjct: 231 YLHMLEEAEKRDHRKLGKQLDLF--HMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + + P + +F+ ++SY Sbjct: 289 YLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFKHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ DA+ F + S + + Sbjct: 348 RDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNT-LAMSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P + E A+ G + +P E Sbjct: 407 YKDFGFDHIDIKLSLRPDQRAGTDETWDRAEQGLRDALTACGLTWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + +++ G A + Sbjct: 458 --------GAFYGPKIEYH---IKDALGRSWQCGTLQLDMVLPERLG--------AEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G +W +++ + + Sbjct: 499 EDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVWLAPYQAIVLNIA------ESQAE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L K G V D E+I + L P ++VG K V ++ R Sbjct: 553 YAQSLTQTLQKQGVRVAADLRNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 M +E + + + Sbjct: 613 VDLGVMPVEAFVERLQEDLRSFK 635 >gi|134295547|ref|YP_001119282.1| threonyl-tRNA synthetase [Burkholderia vietnamiensis G4] gi|166223329|sp|A4JDU4|SYT_BURVG RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|134138704|gb|ABO54447.1| Ser-tRNA(Thr) hydrolase [Burkholderia vietnamiensis G4] Length = 635 Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 150/443 (33%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + S G+ W P G V +R N G Sbjct: 231 YLHMLEEAEKRDHRKLGKQLDLF--HMQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + + P + +F+ ++SY Sbjct: 289 YLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFKHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ DA+ F + S + + Sbjct: 348 RDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFIAESIAFNT-LAMSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ P + E A+ G + +P E Sbjct: 407 YKDFGFEHIDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLTWQELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + +++ G A + Sbjct: 458 --------GAFYGPKIEYH---IKDALGRSWQCGTLQLDMVLPERLG--------AEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G +W +++ + + Sbjct: 499 EDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVWLAPFQAIVLNIA------ESQAE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L K G V D E+I + L P ++VG K V ++ R Sbjct: 553 YAQSLAQTLQKQGVRVAADLRNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 M +E + + + Sbjct: 613 VDLGVMPVEAFVERLQEDLRSFK 635 >gi|90579635|ref|ZP_01235444.1| threonyl-tRNA synthetase [Vibrio angustum S14] gi|90439209|gb|EAS64391.1| threonyl-tRNA synthetase [Vibrio angustum S14] Length = 643 Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 82/442 (18%), Positives = 148/442 (33%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G + IRE+ N Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWTIFRELEVFIREKLNEYDY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFC-TEAQVQQEVTSCIEMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +I ++ + P S + D E+ + + + M+ P + Sbjct: 410 KTFGFDNIVVKLSTRPEKRVGSD---AMWDKAESDLITALESMEIPFEIQ---------- 456 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y + L D L + ++ G AT+ G Sbjct: 457 ----EGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFALPERLG--------ATYVGE 501 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D + H + +G++ ++ + G W +++ + Sbjct: 502 DNERHTPVMIHRAILGSLERFIGILIEDYAGFFPTWLAPQQAVVMNIT------DAQSEY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++I +L K G V D E+IG + L P ++ G K V V ++ R Sbjct: 556 VQEIVEKLKKCGIRVNADLRNEKIGFKIREHTLKRVPFMLVCGDKEVEAGVVAVRTRKGK 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 ++E++ + S+ + Sbjct: 616 DLGKFKIDELVAFMQEEISSRK 637 >gi|296187094|ref|ZP_06855492.1| threonyl-tRNA synthetase [Clostridium carboxidivorans P7] gi|296048288|gb|EFG87724.1| threonyl-tRNA synthetase [Clostridium carboxidivorans P7] Length = 560 Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 83/440 (18%), Positives = 153/440 (34%), Gaps = 42/440 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + +H+ G + P G + + RE + Sbjct: 153 YLNMLEEAKKRDHRKLGKELDLFS--MHEEGPGFPFFHPKGMIIRNTLQNFWREMHSAAD 210 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW +SG +D Y + M +++ P + ++++ I SY Sbjct: 211 YDEIMTPVILNEKLWRQSGHWDHYKENM-YFTKIDNEDYAIKPMNCPGSILVYKNTIHSY 269 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + ++ L R E G+MR R F DA+ F + N + + Sbjct: 270 RELPLRYAEMGLAHRHEKSGALHGLMRVRCFTQDDAHMFLAKDNITDEIVNVIK--LIDD 327 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F+++ + + P S E + D I Sbjct: 328 FYKVFGFEYFVELSTRPEDSMGSDE-----------------DWEAATNGLRKALDTIGL 370 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H + R + G + + T+ G Sbjct: 371 KYKVNEGDGAFYGPKIDFHL----------RDCIGRTWQCGTV-QLDFQMPERFDLTYIG 419 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + G++ ++ + G W V +++ D Sbjct: 420 ADGEKHRPVMVHRVVFGSVERFIGILIEHYAGAFPAWLAPVQVKIMNIT------DDQID 473 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D E+IG + A L P +++G K + ++ V ++ R Sbjct: 474 YANKVAKELKKNKIRVEVDLRNEKIGYKIREAQLQKVPYMLVLGDKEMKENTVAVRSRKL 533 Query: 424 GIREDMSLEEVINYASHRFS 443 G M+L++ + Sbjct: 534 GDLGAMALDQFVEKIKGEID 553 >gi|167836852|ref|ZP_02463735.1| threonyl-tRNA synthetase [Burkholderia thailandensis MSMB43] Length = 635 Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 78/443 (17%), Positives = 149/443 (33%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + S G+ W P G V +R + G Sbjct: 231 YLHMLEEAEKRDHRKLGKQLDLF--HLQEESPGMVFWHPKGWTLWQQVEQYMRRRLDAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + + P + +F+ ++SY Sbjct: 289 YLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFKHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ DA+ F + + + + + Sbjct: 348 RDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQINSEAIAFN-KLAMSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P S E A+ G + +P E Sbjct: 407 YADFGFDRIDIKLSLRPEQRMGSDETWDHAEEGLRNALKACGLEWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + +++ G A + Sbjct: 458 --------GAFYGPKIEYH---IKDALGRSWQCGTLQLDMMLPERLG--------AEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G +W +++ + + Sbjct: 499 EDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVWLAPAHAVVLNIA------ESQAE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L K G V D E+I + L P ++VG K V ++ R Sbjct: 553 YAQTVAQSLQKQGLRVSADLRNEKISYKIREHTLEKVPYLLVVGDKEREAQTVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 M +E + + Sbjct: 613 VDLGVMPVEAFVERLREDIQAFK 635 >gi|310827810|ref|YP_003960167.1| threonyl-tRNA synthetase [Eubacterium limosum KIST612] gi|308739544|gb|ADO37204.1| threonyl-tRNA synthetase [Eubacterium limosum KIST612] Length = 637 Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 87/443 (19%), Positives = 157/443 (35%), Gaps = 41/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L + +H+ G + P G + + R E + Sbjct: 229 EYLQRLEEAKKRDHRKLGKELDLFS--MHEEGPGFPFFHPKGMVLRNELENFWRSEHMKK 286 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + +ADLW SG +D+Y + M + + + P + ++++ S Sbjct: 287 GYKEIKTPIMLNADLWRRSGHWDNYKENM-YFTEIDGQEFAVKPMNCPGGMLVYKTRQHS 345 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP ++ R EL G+MR R F DA+ F LT + K + Sbjct: 346 YRELPLRMGELGQVHRHELHGALHGLMRVRTFTQDDAHIF-LTMDQVKDEVIGIIDLANE 404 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I+ G K V T + + + + + Sbjct: 405 IYDIFGFKYK------------------VELSTKPEKAIGKDEDWEVATDALREALEAKG 446 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y D H E R + G I + T+ Sbjct: 447 MDYQLNPGDGAFYGPKIDFHLED----------SIGRTWQCGTI-QLDMQMPERFDLTYV 495 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G+DG+ H + G++ ++ GK +W V I + Sbjct: 496 GSDGEKHRPVILHRTIFGSIERFLGILIEHFAGKFPLWLAPVQVQLIPV------SDAHD 549 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 ++I A+L + G V D E+IG + A + P +++G K V ++ I++R Sbjct: 550 AFTKEIAAKLEEAGIRVEIDFRDEKIGYRIREAQMQKIPYMLVIGDKEVESGRLSIRNRD 609 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 TG +E + ++E + + Sbjct: 610 TGEQETLKIDEFKYRLAQNIAQK 632 >gi|90021224|ref|YP_527051.1| threonyl-tRNA synthetase [Saccharophagus degradans 2-40] gi|123090560|sp|Q21KE0|SYT_SACD2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|89950824|gb|ABD80839.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Saccharophagus degradans 2-40] Length = 636 Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 82/444 (18%), Positives = 153/444 (34%), Gaps = 41/444 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K ++ L+E RD K L I + + G+ W P G + +RE Q Sbjct: 229 KAYVHRLEEAEKRDHRKLGKKFDLF--HIQEEAPGMVFWHPNGWSIYTAIEEYMREVQRL 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW SG +D + M + + + P + +F +K Sbjct: 287 NGYEEIKTPQVVDRSLWERSGHWDKFRDNMFTV-ESESRDYAVKPMNCPCHVQVFNQGLK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F+ DA+ F + + + Sbjct: 346 SYRDLPLRLAEFGCCHRNEASGTLQGLMRVRGFVQDDAHIFC-SESMIQDEVSVFTDLLF 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +++ G + + +R + P S E D + + D Sbjct: 405 KVYKDFGFEDVIIRLSTRPEQRVGSDE-----------------VWDKAEKALSDALDAK 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 ++ A Y + L D L + ++ A F Sbjct: 448 GLPWQLLPGEGAFYGPKIEF---SLKDCLGRVWQCGTIQVDFSMPGRLD--------AQF 496 Query: 303 KGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 DG V + +G+ ++ + +P +AP + L+NI + Sbjct: 497 VAEDGSRQVPVMLHRAILGSFERFIGILI---EEYEGAFPAWLAPTQAVLLNITDN---Q 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + +K+ L G V D E+IG + + P ++VG + V ++ V ++ R Sbjct: 551 AEYVKKVENSLKNKGFRVNSDLRNEKIGFKIREHTIQKVPYLLVVGDQEVENNSVAVRGR 610 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 M+++ + S+ Sbjct: 611 GGEDLGVMTVDAFTALLEEQISSK 634 >gi|255280775|ref|ZP_05345330.1| threonine--tRNA ligase [Bryantella formatexigens DSM 14469] gi|255268712|gb|EET61917.1| threonine--tRNA ligase [Bryantella formatexigens DSM 14469] Length = 642 Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 90/443 (20%), Positives = 151/443 (34%), Gaps = 43/443 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L M+ G +LP G + + RE + G Sbjct: 230 YITRMEEAKKRDHRKLGKQLGLF--MMRDEGPGFPFFLPNGMIVKNALLDYWREIHRKAG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+S P + + LW SG +D Y + M +D P + +++S +SY Sbjct: 288 YVEISTPIMLNRQLWETSGHWDHYRENMYT-TVIDDTDFAIKPMNCPGGILVYQSEPRSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP +I L R E + G+MR R F DA+ F + + + Sbjct: 347 RDLPLRMGEIGLVHRHEKSGQLHGLMRVRCFNQDDAHIFMTPEQICDE-IKGVVKLIDEV 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K + + P S E + + DD+ Sbjct: 406 YQLFGFKYH-VELSTRPENSMGSDE-----------------DWEMATDGLRSALDDLGL 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H E DS+ + ++ F ++ + + G Sbjct: 448 DYVVNEGDGAFYGPKIDFHLE---DSIGRTWQCGTIQLD----FQLPLRF----NCEYIG 496 Query: 305 ADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 ADG+ H M + R + +IE Sbjct: 497 ADGEKHRPIMIHRVVFGSVERFIGILIEHFAGAFPTWLSPEQVRVLPI-------SDKYL 549 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D +K+ A L++ G D E+IG + A L P ++VG+K D KV ++ R Sbjct: 550 DYADKVNAALNENGIRSSVDTRAEKIGYKIREARLAKVPYMLVVGAKEEEDGKVSVRSRF 609 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 G +L++ I Sbjct: 610 LGDEGQKNLDDFIAAIKEEIRTR 632 >gi|56749447|sp|Q7MK65|SYT_VIBVY RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS Length = 642 Score = 275 bits (702), Expect = 2e-71, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 146/442 (33%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ IRE+ G Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSVFRDLEVFIREKLTEYGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFC-TESQIQDEVTNCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +I ++ + P S E D + + + Sbjct: 410 QTFGFDNIAVKLSTRPEQRVGSDE-----------------IWDQSEEALKQALESMDIA 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y + LFD L + ++ G AT+ G Sbjct: 453 YEIQEGEGAFYGPKIEF---TLFDCLGRAWQCGTVQLDFNLPNRLG--------ATYVGE 501 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + + V + +G++ ++ + G W +++ D Sbjct: 502 NNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVIMNIT------DKQADY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++I +L K G D E+IG + L P ++ G + + ++ ++ R Sbjct: 556 VQEIAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPFMLVCGDQEMEAGEIAVRTRKGN 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 +++ ++Y + ++ + Sbjct: 616 DLGKFKVDDFVSYIQDQIASRK 637 >gi|27365716|ref|NP_761244.1| threonyl-tRNA synthetase [Vibrio vulnificus CMCP6] gi|31340449|sp|Q8DA13|SYT_VIBVU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|27361865|gb|AAO10771.1| threonyl-tRNA synthetase [Vibrio vulnificus CMCP6] Length = 642 Score = 275 bits (702), Expect = 2e-71, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 146/442 (33%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ IRE+ G Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSVFRDLEVFIREKLTEYGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFC-TESQIQDEVTNCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +I ++ + P S E D + + + Sbjct: 410 QTFGFDNIAVKLSTRPEQRVGSDE-----------------IWDQSEEALKQALESMDIA 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y + LFD L + ++ G AT+ G Sbjct: 453 YEIQEGEGAFYGPKIEF---TLFDCLGRAWQCGTVQLDFNLPNRLG--------ATYVGE 501 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + + V + +G++ ++ + G W +++ D Sbjct: 502 NNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVIMNIT------DKQADY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++I +L K G D E+IG + L P ++ G + + ++ ++ R Sbjct: 556 VQEIAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPFMLVCGDQEMEAGEIAVRTRKGN 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 +++ ++Y + ++ + Sbjct: 616 DLGKFKVDDFVSYIQDQIASRK 637 >gi|323526736|ref|YP_004228889.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1001] gi|323383738|gb|ADX55829.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1001] Length = 635 Score = 275 bits (702), Expect = 2e-71, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 148/441 (33%), Gaps = 41/441 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + S G+ W P G V +R N G Sbjct: 231 YLHMLEEAEKRDHRKLGKQLDLF--HMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNEAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + + P + +F ++SY Sbjct: 289 YLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFNHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ DA+ F + S + + Sbjct: 348 RDLPLRYAEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNT-LAMSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++ ++ P + E A+ G + + +P E Sbjct: 407 YKDFGFDNVEIKLSLRPDARAGTDETWDRAEQGLREALTACGVSWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + +++ G A + Sbjct: 458 --------GAFYGPKVEYH---IKDALGRSWQCGTLQLDMVLPERLG--------AEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G W + +++ + + Sbjct: 499 EDNSRRRPIMLHRAIVGSMERFLGILIEHHAGAMPAWLAPMQVVVMNIA------ESQAE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L K G V D E+I + L P ++VG K V ++ R Sbjct: 553 YAQSLAQTLQKQGVRVEADLRNEKISYKIREHTLEKVPYLLVVGDKEREAQTVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSN 444 M ++ I + Sbjct: 613 VDLGVMPVDAFIERLRQDVQS 633 >gi|105892737|gb|ABF75902.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Burkholderia cenocepacia AU 1054] gi|116647586|gb|ABK08227.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Burkholderia cenocepacia HI2424] Length = 618 Score = 274 bits (701), Expect = 2e-71, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 149/443 (33%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + S G+ W P G V +R N G Sbjct: 214 YLHMLEEAEKRDHRKLGKQLDLF--HMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAG 271 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + + P + +F+ ++SY Sbjct: 272 YLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFKHGLRSY 330 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ DA+ F + S + + Sbjct: 331 RDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNT-LAMSV 389 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P + E A+ G + +P E Sbjct: 390 YKDFGFDHIDIKLSLRPDQRAGTDETWDRAEQGLRDALTACGLTWEELPGE--------- 440 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + +++ G A + Sbjct: 441 --------GAFYGPKIEYH---IKDALGRSWQCGTLQLDMVLPERLG--------AEYVA 481 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G +W +++ + + Sbjct: 482 EDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVWLAPYQAIVLNIA------ESQAE 535 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L K G V D E+I + L P ++VG K V ++ R Sbjct: 536 YAQSLTQTLQKQGVRVAADLRNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRARGG 595 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 M +E + + + Sbjct: 596 VDLGVMPVEAFVERLQEDLRSFK 618 >gi|312134685|ref|YP_004002023.1| threonyl-tRNA synthetase [Caldicellulosiruptor owensensis OL] gi|311774736|gb|ADQ04223.1| threonyl-tRNA synthetase [Caldicellulosiruptor owensensis OL] Length = 639 Score = 274 bits (701), Expect = 2e-71, Method: Composition-based stats. Identities = 95/449 (21%), Positives = 171/449 (38%), Gaps = 44/449 (9%) Query: 2 RRSKY--FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 ++S+ +L +L+E RD +L L I G +LP G + + R Sbjct: 227 KKSQLDEYLTMLEEAKKRDHRKLGRELDLFD--IFDEGPGFPFFLPKGMIIRNILEDFWR 284 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 EE + G E+ P + + +LW++SG +D Y + M +D+ P + ++ Sbjct: 285 EEHKKRGYQEIKTPIMLTKELWIQSGHWDHYKENM-YFTKIDDQEFAIKPMNCPGGILVY 343 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + SYR LP ++ L R EL G+MR R F DA+ F L P K + Sbjct: 344 KRKSHSYRELPQRLCELGLVHRHELSGVLHGLMRVRCFTQDDAHIFML-PSQIKDEIKGV 402 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 ++ G K + + P + E +A++ + Sbjct: 403 IDLIDYFYNVFGFKYH-VELSTRPENSMGTDEQWNMAES-----------------ALKE 444 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 ++I I E A Y D H E DSL + + ++ F ++ Sbjct: 445 ALEEIGISYKINEGDGAFYGPKIDFHLE---DSLKRTWQCATIQLD----FQMPERFD-- 495 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + G DG H + G++ A++ + G +P +AP ++ +I + Sbjct: 496 --LYYIGEDGAKHRPVMLHRVVFGSIERFIAILT---EHFGGAFPVWLAPTQVRVIPVSD 550 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + K+ L + G V D E +G + A L P VIVG K ++ V Sbjct: 551 N---FNNYAAKVSQILKENGFRVEEDYRSETVGYKIRDAQLQKIPYMVIVGEKEQKENTV 607 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ R G +++E ++ + Sbjct: 608 AVRDRKKGDLGSFTIDEFVSMMKEKVEKK 636 >gi|283797704|ref|ZP_06346857.1| threonine--tRNA ligase [Clostridium sp. M62/1] gi|291074600|gb|EFE11964.1| threonine--tRNA ligase [Clostridium sp. M62/1] Length = 650 Score = 274 bits (701), Expect = 2e-71, Method: Composition-based stats. Identities = 89/442 (20%), Positives = 156/442 (35%), Gaps = 41/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L M+H G +LP G + + + RE + G Sbjct: 238 YITMMEEAKKRDHRKLGKELGLF--MMHDAGPGFPFFLPKGMQLKNTLLDYWREIHKKAG 295 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+S P + + LW SG +D Y M +++ P + ++ S +SY Sbjct: 296 YVEISTPIILNRSLWETSGHWDHYKNNMYT-TVIDEEDYAIKPMNCPGGVLVYASEPRSY 354 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R E + G+MR R F DA+ F + K + + Sbjct: 355 RDLPLRMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPEQIKDE--IKGVATLINE 412 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + L + + P S E + + D++ Sbjct: 413 VYTLFGFKYHVELSTRPEDSMGSDE-----------------DWELATEGLRSALDELGL 455 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H E D + + ++ F ++ + G Sbjct: 456 PYVVNEGDGAFYGPKIDFHLE---DCIGRTWQCGTIQLD----FQLPQRF----ELEYTG 504 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + G++ ++ G W +AP ++ ++ I D Sbjct: 505 ADGEKHRPIMIHRVVFGSIERFIGILIEHFAGAFPTW---LAPVQVKVLPISDK---YAD 558 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+Y LS+ G D E+IG + A P ++VG K + V ++ R Sbjct: 559 YAAKVYESLSEAGIRAEVDTRSEKIGYKIREAQTNKIPYMLVVGQKEEEEGTVSVRSRFA 618 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G SLE I ++ Sbjct: 619 GDEGASSLESFIEKIQKEIASK 640 >gi|167587363|ref|ZP_02379751.1| threonyl-tRNA synthetase [Burkholderia ubonensis Bu] Length = 635 Score = 274 bits (701), Expect = 2e-71, Method: Composition-based stats. Identities = 78/443 (17%), Positives = 148/443 (33%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + S G+ W P G V +R N G Sbjct: 231 YLHMLEEAEKRDHRKLGKQLDLF--HMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + + P + +F+ ++SY Sbjct: 289 YLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFKHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ DA+ F + S + + Sbjct: 348 RDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNT-LAMSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P + E A+ G + +P E Sbjct: 407 YKDFGFDHIDIKLSLRPDQRAGTDETWDRAEQGLRDALTACGLAWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + +++ G A + Sbjct: 458 --------GAFYGPKIEYH---IKDALGRSWQCGTLQLDMVLPERLG--------AEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G +W +++ + + Sbjct: 499 EDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVWLAPFQAIVLNIA------ESQAE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L K G D E+I + L P ++VG K V ++ R Sbjct: 553 YAQSLAQTLQKQGVRAAADLRNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 M +E + + + Sbjct: 613 VDLGVMPVEAFVERLQEDLRSFK 635 >gi|37680129|ref|NP_934738.1| threonyl-tRNA synthetase [Vibrio vulnificus YJ016] gi|37198875|dbj|BAC94709.1| threonyl-tRNA synthetase [Vibrio vulnificus YJ016] Length = 655 Score = 274 bits (701), Expect = 2e-71, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 146/442 (33%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ IRE+ G Sbjct: 247 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSVFRDLEVFIREKLTEYGY 304 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 305 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYR 363 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + Sbjct: 364 DLPLRMAEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFC-TESQIQDEVTNCIKMVYDTY 422 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +I ++ + P S E D + + + Sbjct: 423 QTFGFDNIAVKLSTRPEQRVGSDE-----------------IWDQSEEALKQALESMDIA 465 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y + LFD L + ++ G AT+ G Sbjct: 466 YEIQEGEGAFYGPKIEF---TLFDCLGRAWQCGTVQLDFNLPNRLG--------ATYVGE 514 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + + V + +G++ ++ + G W +++ D Sbjct: 515 NNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVIMNIT------DKQADY 568 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++I +L K G D E+IG + L P ++ G + + ++ ++ R Sbjct: 569 VQEIAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPFMLVCGDQEMEAGEIAVRTRKGN 628 Query: 425 IREDMSLEEVINYASHRFSNNR 446 +++ ++Y + ++ + Sbjct: 629 DLGKFKVDDFVSYIQDQIASRK 650 >gi|254785570|ref|YP_003072999.1| threonyl-tRNA synthetase [Teredinibacter turnerae T7901] gi|259516754|sp|C5BSQ1|SYT_TERTT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|237684404|gb|ACR11668.1| threonine--tRNA ligase [Teredinibacter turnerae T7901] Length = 637 Score = 274 bits (701), Expect = 2e-71, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 147/444 (33%), Gaps = 41/444 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L L+E RD K L + + + G+ W P G + +R+ Q Sbjct: 229 KAYLHRLEEAEKRDHRKLGKKFDLF--HLQEEAPGMVFWHPKGWSVYTAIEQYMRKVQRE 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW SG +D + M + + + P + +F +K Sbjct: 287 NGYKEIKTPQVVDRSLWERSGHWDKFRDGMFTV-ESESRDYAVKPMNCPCHIQVFNQGLK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP F + R+E G+MR R F D + F + Y Sbjct: 346 SYRDLPLRFAEFGSCHRNEASGTLQGIMRVRAFTQDDGHIFCAEDAIQSEVSIFTDLLYE 405 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + G + + +R + P S E D + + Sbjct: 406 V-YRDFGFEDVIIRLSTRPEQRVGSEE-----------------VWDKSEKALADALNAK 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + L D + + ++ A F Sbjct: 448 GLAFEYLPGEGAFYGPKIEF---SLKDCIGRVWQCGTIQVDFSMPARLD--------AQF 496 Query: 303 KGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 DG V + +G+ ++ + +P +AP ++ ++NI + Sbjct: 497 VAEDGSRQVPVMLHRAILGSFERFIGILI---ENYEGAFPPWLAPEQVVVMNITDN---Q 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + EK+ L G V D E+IG + + P ++VG + + ++ V ++ R Sbjct: 551 AEYAEKVRNSLQNEGFRVVSDLRNEKIGFKIREHTIQKVPYLLVVGDQEMENNSVAVRTR 610 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 S+++ + + Sbjct: 611 EGKDLGTYSVDDFATLLADSVAKR 634 >gi|315181382|gb|ADT88295.1| threonyl-tRNA synthetase [Vibrio furnissii NCTC 11218] Length = 642 Score = 274 bits (701), Expect = 2e-71, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 146/442 (33%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ IR + N G Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSIFRDLEVFIRHKLNEYGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENRDYAIKPMNCPGHVQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFC-TEDQIQEEVTSCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +I ++ + P S E D + + + Sbjct: 410 TTFGFDNIAVKLSTRPEKRVGSDE-----------------IWDKSEEALKHSLEAMGIA 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y + L+D L + ++ G AT+ G Sbjct: 453 YEIQEGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLDFNLPTRLG--------ATYVGE 501 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + + V + +G++ ++ + G W +++ D Sbjct: 502 NNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVVVNIT------DKQADY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ +L K G D E+IG + L P ++ G + + ++ ++ R Sbjct: 556 AQEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTRKGK 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 L++ +++ ++ + Sbjct: 616 DLGKFKLDDFVSHIQTEIASRK 637 >gi|320156122|ref|YP_004188501.1| threonyl-tRNA synthetase [Vibrio vulnificus MO6-24/O] gi|319931434|gb|ADV86298.1| threonyl-tRNA synthetase [Vibrio vulnificus MO6-24/O] Length = 642 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 146/442 (33%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ IRE+ G Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSVFRDLEVFIREKLAEYGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFC-TESQIQDEVTNCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +I ++ + P S E D + + + Sbjct: 410 QTFGFDNIAVKLSTRPEQRVGSDE-----------------IWDQSEEALKQALESMDIA 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y + LFD L + ++ G AT+ G Sbjct: 453 YEIQEGEGAFYGPKIEF---TLFDCLGRAWQCGTVQLDFNLPNRLG--------ATYVGE 501 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + + V + +G++ ++ + G W +++ D Sbjct: 502 NNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVIMNIT------DKQADY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++I +L K G D E+IG + L P ++ G + + ++ ++ R Sbjct: 556 VQEIAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPFMLVCGDQEMEAGEIAVRTRKGN 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 +++ ++Y + ++ + Sbjct: 616 DLGKFKVDDFVSYIQDQIASRK 637 >gi|295092070|emb|CBK78177.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Clostridium cf. saccharolyticum K10] Length = 650 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 89/442 (20%), Positives = 156/442 (35%), Gaps = 41/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L M+H G +LP G + + + RE + G Sbjct: 238 YITMMEEAKKRDHRKLGKELGLF--MMHDAGPGFPFFLPKGMQLKNTLLDYWREIHKKAG 295 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+S P + + LW SG +D Y M +++ P + ++ S +SY Sbjct: 296 YVEISTPIILNRSLWETSGHWDHYKNNMYT-TVIDEEDYAIKPMNCPGGVLVYASEPRSY 354 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R E + G+MR R F DA+ F + K + + Sbjct: 355 RDLPLRMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPEQIKDE--IKGVATLINQ 412 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + L + + P S E + + D++ Sbjct: 413 VYTLFGFKYHVELSTRPEDSMGSDE-----------------DWELATEGLRSALDELGL 455 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H E D + + ++ F ++ + G Sbjct: 456 PYVVNEGDGAFYGPKIDFHLE---DCIGRTWQCGTIQLD----FQLPQRF----ELEYTG 504 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + G++ ++ G W +AP ++ ++ I D Sbjct: 505 ADGEKHRPIMIHRVVFGSIERFIGILIEHFAGAFPTW---LAPVQVKVLPISDK---YAD 558 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+Y LS+ G D E+IG + A P ++VG K + V ++ R Sbjct: 559 YAAKVYESLSEAGIRAEVDTRSEKIGYKIREAQTNKIPYMLVVGQKEEEEGTVSVRSRFA 618 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G SLE I ++ Sbjct: 619 GDEGASSLESFIEKIQKEIASK 640 >gi|125973743|ref|YP_001037653.1| threonyl-tRNA synthetase [Clostridium thermocellum ATCC 27405] gi|256005747|ref|ZP_05430701.1| threonyl-tRNA synthetase [Clostridium thermocellum DSM 2360] gi|281417900|ref|ZP_06248920.1| threonyl-tRNA synthetase [Clostridium thermocellum JW20] gi|166223337|sp|A3DET1|SYT_CLOTH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|125713968|gb|ABN52460.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Clostridium thermocellum ATCC 27405] gi|255990281|gb|EEU00409.1| threonyl-tRNA synthetase [Clostridium thermocellum DSM 2360] gi|281409302|gb|EFB39560.1| threonyl-tRNA synthetase [Clostridium thermocellum JW20] gi|316940063|gb|ADU74097.1| threonyl-tRNA synthetase [Clostridium thermocellum DSM 1313] Length = 635 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 89/442 (20%), Positives = 155/442 (35%), Gaps = 41/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L I++ G ++P G + + REE + G Sbjct: 231 YITRIEEAKKRDHRKLGRELDLFD--IYEEGPGFPFFMPKGMVLRNVLEEYWREEHRKAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + +LW SG +D Y + M ++ P + +++ + SY Sbjct: 289 YQEIKTPIILNEELWHRSGHWDHYKENM-YFTKIDEADFAIKPMNCPGGMLVYKRKLHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R EL G+MR R F DA+ F +TP+ + + Sbjct: 348 RDLPQRLAELGLVHRHELSGVLHGLMRVRCFTQDDAHIF-MTPDQIESEILGVISLIDDF 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K + + P S E + + + Sbjct: 407 YKVFGFKYH-VELSTRPENSMGSDE-----------------DWERATNALKNALEKKGI 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D H E R + G I + T+ G Sbjct: 449 DYKINEGDGAFYGPKIDFHLED----------SIGRTWQCGTI-QLDFQMPERFDLTYIG 497 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ A++ + G +W V + ++ + D Sbjct: 498 PDGEKHRPVMIHRVVFGSIERFIAILTEHYAGAFPVWLSPVQVKILPIL------EKQHD 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L + G V D E+IG + A L P +++G K + + V ++ R Sbjct: 552 YVAEVKKALEEKGVRVEADLRNEKIGYKIREAQLEKVPYMLVIGDKEMENRTVAVRSRKD 611 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G M LE+ +N N Sbjct: 612 GDLGPMRLEDFVNRIVEAIKNK 633 >gi|330445795|ref|ZP_08309447.1| threonyl-tRNA synthetase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489986|dbj|GAA03944.1| threonyl-tRNA synthetase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 643 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 142/442 (32%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G + +RE+ N Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWTIFRELEVFVREKLNEYDY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFC-TEAQVQQEVTSCIEMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +I ++ + P S D T + + Sbjct: 410 KTFGFDNIVVKLSTRPEKR-----------------VGSDAMWDKAESDLVTALESMNIP 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y + L D L + ++ G AT+ G Sbjct: 453 FEIQEGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFALPERLG--------ATYVGE 501 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D + H + +G++ ++ + G W +++ + Sbjct: 502 DNERHTPVMIHRAILGSLERFIGILIEDYAGFFPTWLAPQQAVVMNIT------DAQSEY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++I +L K G V D E+IG + L P ++ G K V V ++ R Sbjct: 556 VQEIVEKLKKCGIRVNADLRNEKIGFKIREHTLKRVPFMLVCGDKEVEAGVVAVRTRKGK 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 ++E++ + S+ + Sbjct: 616 DLGKFKIDELVAFMQEEISSRK 637 >gi|312622904|ref|YP_004024517.1| threonyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002] gi|312203371|gb|ADQ46698.1| threonyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002] Length = 639 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 99/449 (22%), Positives = 169/449 (37%), Gaps = 44/449 (9%) Query: 2 RRSKY--FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 ++S+ +L +L+E RD +L L I + G +LP G + + R Sbjct: 227 KKSQLDEYLTMLEEAKKRDHRKLGRELDLFD--IFEEGPGFPFFLPKGMIIRNILEDFWR 284 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 EE + G E+ P + + DLWV+SG +D Y M +D+ P + ++ Sbjct: 285 EEHKKRGYQEIKTPIMLTKDLWVQSGHWDHYKGNM-YFTKIDDQEFAIKPMNCPGSILVY 343 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + SYR LP ++ L R EL G+MR R F DA+ F L P K + Sbjct: 344 KRKSHSYRELPERLCELGLVHRHELSGVLHGLMRVRCFTQDDAHIFML-PSQIKDEIKGV 402 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 + G K + + P + E +A+T + Sbjct: 403 IDLIDYFYSVFGFKYH-VELSTRPENSMGTDEQWNMAET-----------------ALKE 444 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 +++ I E A Y D H E DSL + + ++ F ++ Sbjct: 445 ALEEVGIDYKINEGDGAFYGPKIDFHLE---DSLKRTWQCATIQLD----FQMPERFD-- 495 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + G DG H + G++ A++ + +P +AP +I +I + Sbjct: 496 --LYYIGEDGAKHRPVMLHRVVFGSIERFIAILT---EHFAGAFPVWLAPTQIRIIPVSD 550 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + D KI L + G V D E +G + A L P VIVG K D+ + Sbjct: 551 N---FNDYAAKISQILKENGFRVEEDFRSETVGYKIRDAQLQKIPYMVIVGEKEQRDNTI 607 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ R G +++E ++ + Sbjct: 608 AVRDRKKGDLGSFTIDEFVSMVKDKVEKK 636 >gi|258515613|ref|YP_003191835.1| threonyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] gi|257779318|gb|ACV63212.1| threonyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] Length = 634 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 89/440 (20%), Positives = 150/440 (34%), Gaps = 41/440 (9%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 I + RD +L L + M + G + P G + + R+E + G E Sbjct: 234 RIEEAKRRDHRKLGAELELFSVM--EEGPGFPFFHPKGMILRNELEKFWRQEHEKRGYQE 291 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 + P + + LW +SG +D Y + M ++ P + I++S + SYR Sbjct: 292 IRTPIILNRVLWEQSGHWDHYKENM-YFTQIDNFDFAVKPMNCPGSMLIYKSKLHSYREF 350 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P ++ L R EL G+MR R F DA+ F L P K + + Sbjct: 351 PIRMGELGLVHRHELSGVLHGLMRVRCFTQDDAHIFML-PGQVKDEIIGVIDLVDDFYSI 409 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 G K V T + S + D + + Sbjct: 410 FGFKY------------------HVELSTKPEKAMGSDEVWDMATNTLKEAIEAKGLDYK 451 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 + E A Y D H E R + G I ++ G DG Sbjct: 452 VNEGDGAFYGPKIDFHLED----------CLGRTWQCGTI-QLDFLMPEKFDLSYVGEDG 500 Query: 308 KDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + H + G++ ++ G W +AP ++ ++ I D Sbjct: 501 QKHRPVMLHRVVFGSIERFIGILTEHFAGAFPTW---LAPVQVRVLPITDR---QSDYAV 554 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 ++ RL + G V D E+IG + A P +++G K + V I+HR G Sbjct: 555 RVVDRLKETGIRVELDQRNEKIGYKIREAQTQKIPYMLVIGDKELEKELVAIRHRSQGDL 614 Query: 427 EDMSLEEVINYASHRFSNNR 446 +LE+ I+ + + Sbjct: 615 GISTLEDFIDKLQEEIRDKK 634 >gi|323499329|ref|ZP_08104306.1| threonyl-tRNA synthetase [Vibrio sinaloensis DSM 21326] gi|323315717|gb|EGA68751.1| threonyl-tRNA synthetase [Vibrio sinaloensis DSM 21326] Length = 642 Score = 273 bits (699), Expect = 3e-71, Method: Composition-based stats. Identities = 76/443 (17%), Positives = 137/443 (30%), Gaps = 42/443 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ IR + + G Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSIFRDLEVFIRAKLDEYGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFC-TESQIQEEVTSCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +I ++ + P S E D + + + Sbjct: 410 QTFGFDNIVVKLSTRPEKRVGSDE-----------------IWDQSEEALKQSLEAMNIE 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + E A Y + L D L + ++ G A++ Sbjct: 453 YELQEGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFNLPGRLG--------ASYVDE 501 Query: 306 DGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + M I R + +IE A D Sbjct: 502 NNERQVPVMIHRAILGSLERFIGILIEEYFGFFPTWLSPEQAVIMNIT-------DKQSD 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L KVG D E+IG + L P ++ G + + ++ ++ R Sbjct: 555 YAQEVAQKLQKVGIRAKADLRNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTRKG 614 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 +++ I+Y S + Sbjct: 615 KDLGKFKVDDFISYIQDEISTRK 637 >gi|260770313|ref|ZP_05879246.1| threonyl-tRNA synthetase [Vibrio furnissii CIP 102972] gi|260615651|gb|EEX40837.1| threonyl-tRNA synthetase [Vibrio furnissii CIP 102972] Length = 642 Score = 273 bits (699), Expect = 3e-71, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 146/442 (33%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ IR + N G Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSIFRDLEVFIRHKLNEYGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENRDYAIKPMNCPGHVQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFC-TEDQIQEEVTSCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +I ++ + P S E D + + + Sbjct: 410 TTFGFDNIAVKLSTRPEKRVGSDE-----------------IWDKSEEALKHSLEAMGIA 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y + L+D L + ++ G AT+ G Sbjct: 453 YEIQEGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLDFNLPSRLG--------ATYVGE 501 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + + V + +G++ ++ + G W +++ D Sbjct: 502 NNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVVVNIT------DKQADY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ +L K G D E+IG + L P ++ G + + ++ ++ R Sbjct: 556 AQEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTRKGK 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 L++ +++ ++ + Sbjct: 616 DLGKFKLDDFVSHIQTEIASRK 637 >gi|147671507|ref|YP_001215778.1| threonyl-tRNA synthetase [Vibrio cholerae O395] gi|262168212|ref|ZP_06035910.1| threonyl-tRNA synthetase [Vibrio cholerae RC27] gi|172047342|sp|A5EZ18|SYT_VIBC3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|146313890|gb|ABQ18430.1| threonyl-tRNA synthetase [Vibrio cholerae O395] gi|227014955|gb|ACP11164.1| threonyl-tRNA synthetase [Vibrio cholerae O395] gi|262023455|gb|EEY42158.1| threonyl-tRNA synthetase [Vibrio cholerae RC27] Length = 642 Score = 273 bits (699), Expect = 3e-71, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 146/442 (33%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G + IR + N G Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSVFRELEIFIRHKLNEYGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHIQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFC-TEDQIQQEVTSCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G ++I ++ + P S E D E + S MD P + Sbjct: 410 TTFGFQNIVVKLSTRPEKRVGSDEIW---DKSEQALIDSLKAMDIPFEIQ---------- 456 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y + L+D L + ++ G AT+ G Sbjct: 457 ----EGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLDFNLPTRLG--------ATYVGE 501 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + V + +G++ ++ + G W +++ D Sbjct: 502 SNERLIPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVVVNIT------DKQADY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ +L K G D E+IG + L P ++ G + + ++ ++ R Sbjct: 556 AHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTRKGK 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 L++ I + ++ + Sbjct: 616 DLGKFKLDDFIAHIQAEIASRK 637 >gi|261250893|ref|ZP_05943467.1| threonyl-tRNA synthetase [Vibrio orientalis CIP 102891] gi|260937766|gb|EEX93754.1| threonyl-tRNA synthetase [Vibrio orientalis CIP 102891] Length = 642 Score = 273 bits (698), Expect = 4e-71, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 139/443 (31%), Gaps = 42/443 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ +RE+ G Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSIFRDLEVFVREKLTEYGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y + M ++ P + IF +KSYR Sbjct: 292 QEVKGPLIMDRVLWERSGHWDKYAEAMFT-TSSENREYALKPMNCPGHVQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFC-TESQIQEEVTSCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +I ++ + P S E D + + + Sbjct: 410 QTFGFDNIVVKLSTRPEKRVGSDE-----------------IWDQSEEALKQSLEAMDIA 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y + L D L + ++ G AT+ Sbjct: 453 YEIQEGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFNLPGRLG--------ATYVDE 501 Query: 306 DGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + M I R + +IE + A D Sbjct: 502 NNERQTPVMIHRAILGSLERFIGILIEEYYGFFPTWLSPEQAVIMNIT-------DKQSD 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L K G D E+IG + L P ++ G + + ++ ++ R Sbjct: 555 YVQEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPFMLVCGDQEMEAGEIAVRTRKG 614 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 +++ I+Y S+ + Sbjct: 615 KDLGKFKVDDFISYIQDEISSRK 637 >gi|262394487|ref|YP_003286341.1| threonyl-tRNA synthetase [Vibrio sp. Ex25] gi|262338081|gb|ACY51876.1| threonyl-tRNA synthetase [Vibrio sp. Ex25] Length = 642 Score = 273 bits (698), Expect = 4e-71, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 144/442 (32%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ IR + + G Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSIFRDLEVFIRAKLDEYGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFC-TESQIQEEVTNCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +I ++ + P S E D + + + Sbjct: 410 QTFGFDNIVVKLSTRPEKRVGSDE-----------------IWDQSEEALKQSLESMDIP 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y + L+D L + ++ G AT+ G Sbjct: 453 YEIQEGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLDFNLPGRLG--------ATYVGE 501 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + + V + +G++ ++ + G W +++ Sbjct: 502 NNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVLMNIT------DKQSGY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++I +L K G D E+IG + L P ++VG + + ++ ++ R Sbjct: 556 VQEIVQKLQKSGIRAKADLRNEKIGFKIREHTLKRVPYMLVVGDQEMEAGEIAVRTRKGK 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 +++ I Y S+ + Sbjct: 616 DLGKFKVDDFIAYIQDEISSRK 637 >gi|121591402|ref|ZP_01678683.1| threonyl-tRNA synthetase [Vibrio cholerae 2740-80] gi|121546739|gb|EAX56913.1| threonyl-tRNA synthetase [Vibrio cholerae 2740-80] Length = 642 Score = 273 bits (698), Expect = 4e-71, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 148/442 (33%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ IR++ N G Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHIQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFC-TEDQIQQEVTSCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G ++I ++ + P S E D E + S MD P + Sbjct: 410 TTFGFQNIVVKLSTRPEKRVGSDEIW---DKSEQALIDSLKAMDIPFEVQ---------- 456 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y + L+D L + ++ G AT+ G Sbjct: 457 ----EGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLDFNLPTRLG--------ATYVGE 501 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + V + +G++ ++ + G W +++ D Sbjct: 502 SNERLIPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVVVNIT------DKQADY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ +L K G D E+IG + L P ++ G + + ++ ++ R Sbjct: 556 AHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTRKGK 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 L++ I + ++ + Sbjct: 616 DLGKFKLDDFIAHIQAEIASRK 637 >gi|289163681|ref|YP_003453819.1| Threonyl tRNA synthetase [Legionella longbeachae NSW150] gi|288856854|emb|CBJ10665.1| Threonyl tRNA synthetase [Legionella longbeachae NSW150] Length = 639 Score = 273 bits (698), Expect = 4e-71, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 138/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD L L + G+ W P G + +R G Sbjct: 231 YLFRLEEAEKRDHRKLGKSLELF--HFQDIAPGMVFWHPKGWTIYQELERYMRHRLADFG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L LW +SG + ++ EM + + ++ P + +F +KSY Sbjct: 289 YQEIRTPQLVDRVLWEKSGHWANFRDEMF-VTETENRHYAVKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F + R E G+MR R + DA+ F + M + Sbjct: 348 RDLPLRFSEFGNCHRCEPSGSLHGLMRVRNMVQDDAHIFCTEDQIQSE-VAMMLELVQSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I R P S E D + + Sbjct: 407 YTDFGFNEIKYRLALRPEKRVGSDE-----------------VWDKAEAALKQAMKERNI 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ A + Sbjct: 450 EWVDAPGEGAFYGPKIEC---SLSDCLGRIWQCGTIQVDFSMPGRLD--------AIYIA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + +G+ ++ + GK +W V +++ + + Sbjct: 499 EDGSKQTPVMLHRAILGSFERFMGILIEHYAGKLPLWLSPVQAIIMTI------SEKQSE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 EK+ L K G +D E+IG + L P +++G K V +V ++ R Sbjct: 553 YAEKVTQILQKNGIRANFDLRNEKIGFKIREHTLQKIPYLLVIGDKEVESGQVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M+++ + + ++ Sbjct: 613 TDLGVMTIDTICDTLMQEIAHK 634 >gi|296163127|ref|ZP_06845898.1| threonyl-tRNA synthetase [Burkholderia sp. Ch1-1] gi|295886629|gb|EFG66476.1| threonyl-tRNA synthetase [Burkholderia sp. Ch1-1] Length = 635 Score = 273 bits (698), Expect = 4e-71, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 149/443 (33%), Gaps = 41/443 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD +L L + S G+ W P G V +R N Sbjct: 229 EAYLHMLEEAEKRDHRKLGKQLDLF--HMQDESPGMVFWHPRGWTLWQQVEQYMRRRVND 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G +E+ P + LW SG + +Y + M + + P + +F ++ Sbjct: 287 AGYLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFNHGLR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + + R+E G+MR R F+ DA+ F + S + Sbjct: 346 SYRDLPLRYAEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNT-LAM 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G ++ ++ P + E A+ G + + +P E Sbjct: 405 SVYKDFGFDNVEIKLSLRPDARAGTDETWDRAEQGLREALTACGVTWEELPGE------- 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + H + D+L + + +++ G A + Sbjct: 458 ----------GAFYGPKVEYH---IRDALGRSWQCGTLQLDMVLPERLG--------AEY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D + +G+M ++ H G W + +++ + Sbjct: 497 VAEDNSRRRPIMLHRAIVGSMERFLGILIEHHAGAMPAWLAPMQVVVMNIA------ESQ 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + + L K G V D E+I + L P ++VG K V ++ R Sbjct: 551 TEYAQSLAQSLQKQGVRVEADLRNEKISYKIREHTLEKVPYLLVVGDKEREAQTVAVRAR 610 Query: 422 LTGIREDMSLEEVINYASHRFSN 444 M L+ I + Sbjct: 611 GGVDLGVMPLDTFIERLRQDVQS 633 >gi|15601053|ref|NP_232683.1| threonyl-tRNA synthetase [Vibrio cholerae O1 biovar eltor str. N16961] gi|153817556|ref|ZP_01970223.1| threonyl-tRNA synthetase [Vibrio cholerae NCTC 8457] gi|227811910|ref|YP_002811920.1| threonyl-tRNA synthetase [Vibrio cholerae M66-2] gi|229506559|ref|ZP_04396068.1| threonyl-tRNA synthetase [Vibrio cholerae BX 330286] gi|229510645|ref|ZP_04400125.1| threonyl-tRNA synthetase [Vibrio cholerae B33] gi|229517224|ref|ZP_04406669.1| threonyl-tRNA synthetase [Vibrio cholerae RC9] gi|229606038|ref|YP_002876742.1| threonyl-tRNA synthetase [Vibrio cholerae MJ-1236] gi|254850514|ref|ZP_05239864.1| threonyl-tRNA synthetase [Vibrio cholerae MO10] gi|255745914|ref|ZP_05419861.1| threonyl-tRNA synthetase [Vibrio cholera CIRS 101] gi|262163529|ref|ZP_06031275.1| threonyl-tRNA synthetase [Vibrio cholerae INDRE 91/1] gi|298500133|ref|ZP_07009939.1| threonyl-tRNA synthetase [Vibrio cholerae MAK 757] gi|22654144|sp|Q9KMN7|SYT_VIBCH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783545|sp|C3LUV8|SYT_VIBCM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|9657684|gb|AAF96196.1| threonyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|126511981|gb|EAZ74575.1| threonyl-tRNA synthetase [Vibrio cholerae NCTC 8457] gi|227011052|gb|ACP07263.1| threonyl-tRNA synthetase [Vibrio cholerae M66-2] gi|229345260|gb|EEO10233.1| threonyl-tRNA synthetase [Vibrio cholerae RC9] gi|229353090|gb|EEO18030.1| threonyl-tRNA synthetase [Vibrio cholerae B33] gi|229356910|gb|EEO21828.1| threonyl-tRNA synthetase [Vibrio cholerae BX 330286] gi|229372524|gb|ACQ62946.1| threonyl-tRNA synthetase [Vibrio cholerae MJ-1236] gi|254846219|gb|EET24633.1| threonyl-tRNA synthetase [Vibrio cholerae MO10] gi|255735668|gb|EET91066.1| threonyl-tRNA synthetase [Vibrio cholera CIRS 101] gi|262028096|gb|EEY46755.1| threonyl-tRNA synthetase [Vibrio cholerae INDRE 91/1] gi|297542114|gb|EFH78165.1| threonyl-tRNA synthetase [Vibrio cholerae MAK 757] Length = 642 Score = 273 bits (698), Expect = 4e-71, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 148/442 (33%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ IR++ N G Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHIQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFC-TEDQIQQEVTSCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G ++I ++ + P S E D E + S MD P + Sbjct: 410 TTFGFQNIVVKLSTRPEKRVGSDEIW---DKSEQALIDSLKAMDIPFEIQ---------- 456 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y + L+D L + ++ G AT+ G Sbjct: 457 ----EGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLDFNLPTRLG--------ATYVGE 501 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + V + +G++ ++ + G W +++ D Sbjct: 502 SNERLIPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVVVNIT------DKQADY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ +L K G D E+IG + L P ++ G + + ++ ++ R Sbjct: 556 AHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTRKGK 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 L++ I + ++ + Sbjct: 616 DLGKFKLDDFIAHIQAEIASRK 637 >gi|153827549|ref|ZP_01980216.1| threonyl-tRNA synthetase [Vibrio cholerae MZO-2] gi|153829051|ref|ZP_01981718.1| threonyl-tRNA synthetase [Vibrio cholerae 623-39] gi|229514759|ref|ZP_04404220.1| threonyl-tRNA synthetase [Vibrio cholerae TMA 21] gi|229522960|ref|ZP_04412374.1| threonyl-tRNA synthetase [Vibrio cholerae TM 11079-80] gi|229526102|ref|ZP_04415506.1| threonyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426] gi|229527753|ref|ZP_04417144.1| threonyl-tRNA synthetase [Vibrio cholerae 12129(1)] gi|254284959|ref|ZP_04959925.1| threonyl-tRNA synthetase [Vibrio cholerae AM-19226] gi|148875480|gb|EDL73615.1| threonyl-tRNA synthetase [Vibrio cholerae 623-39] gi|149738482|gb|EDM52878.1| threonyl-tRNA synthetase [Vibrio cholerae MZO-2] gi|150424962|gb|EDN16739.1| threonyl-tRNA synthetase [Vibrio cholerae AM-19226] gi|229334115|gb|EEN99600.1| threonyl-tRNA synthetase [Vibrio cholerae 12129(1)] gi|229336260|gb|EEO01278.1| threonyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426] gi|229340177|gb|EEO05185.1| threonyl-tRNA synthetase [Vibrio cholerae TM 11079-80] gi|229348739|gb|EEO13697.1| threonyl-tRNA synthetase [Vibrio cholerae TMA 21] gi|327485485|gb|AEA79891.1| Threonyl-tRNA synthetase [Vibrio cholerae LMA3894-4] gi|327485490|gb|AEA79896.1| Threonyl-tRNA synthetase [Vibrio cholerae LMA3894-4] Length = 642 Score = 273 bits (698), Expect = 4e-71, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 148/442 (33%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ IR++ N G Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHIQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFC-TEDQIQQEVTSCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G ++I ++ + P S E D E + S MD P + Sbjct: 410 TTFGFQNIVVKLSTRPEKRVGSDEIW---DKSEQALIDSLKAMDIPFEIQ---------- 456 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y + L+D L + ++ G AT+ G Sbjct: 457 ----EGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLDFNLPTRLG--------ATYVGE 501 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + V + +G++ ++ + G W +++ D Sbjct: 502 SNERLIPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVVVNIT------DKQADY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ +L K G D E+IG + L P ++ G + + ++ ++ R Sbjct: 556 AHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTRKGK 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 L++ I + ++ + Sbjct: 616 DLGKFKLDDFIAHIQAEIASRK 637 >gi|307730402|ref|YP_003907626.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1003] gi|307584937|gb|ADN58335.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1003] Length = 635 Score = 273 bits (698), Expect = 4e-71, Method: Composition-based stats. Identities = 78/442 (17%), Positives = 151/442 (34%), Gaps = 39/442 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD +L L + S G+ W P G V +R N Sbjct: 229 EAYLHMLEEAEKRDHRKLGKQLDLF--HMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNE 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G +E+ P + LW SG + +Y + M + + P + +F ++ Sbjct: 287 AGYLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFNHGLR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + + R+E G+MR R F+ DA+ F + S + Sbjct: 346 SYRDLPLRYAEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEEQFISESIAFNT-LAM 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G ++ ++ P + E A+ G + + +P E Sbjct: 405 SVYKDFGFDNVEIKLSLRPDARAGTDETWDRAEQGLREALTACGVTWEELPGE------- 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + H + D+L + + +++ G +Y Sbjct: 458 ----------GAFYGPKVEYH---IKDALGRSWQCGTLQLDMVLPERLGAEY-------V 497 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 +G+ + + +G+M ++ H G W + +++ + Sbjct: 498 AEDNGRRRPIMLHRAIVGSMERFLGILIEHHAGAMPAWLAPMQVVVMNIA------ENQA 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + + + L K G V D E+I + L P ++VG K V ++ R Sbjct: 552 EYAQSLAQSLQKQGVRVEADLRNEKISYKIRQHTLEKVPYLLVVGDKEREAQTVAVRARG 611 Query: 423 TGIREDMSLEEVINYASHRFSN 444 M + I + Sbjct: 612 GVDLGVMPVGAFIERLRQDVQS 633 >gi|295115128|emb|CBL35975.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [butyrate-producing bacterium SM4/1] Length = 605 Score = 273 bits (697), Expect = 5e-71, Method: Composition-based stats. Identities = 89/442 (20%), Positives = 156/442 (35%), Gaps = 41/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L M+H G +LP G + + + RE + G Sbjct: 193 YITMMEEAKKRDHRKLGKELGLF--MMHDAGPGFPFFLPKGMQLKNTLLDYWREIHKKAG 250 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+S P + + LW SG +D Y M +++ P + ++ S +SY Sbjct: 251 YVEISTPIILNRSLWETSGHWDHYKNNMYT-TVIDEEDYAIKPMNCPGGVLVYASEPRSY 309 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R E + G+MR R F DA+ F + K + + Sbjct: 310 RDLPLRMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPEQIKDE--IKGVATLINE 367 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + L + + P S E + + D++ Sbjct: 368 VYTLFGFKYHVELSTRPEDSMGSDE-----------------DWELATEGLRSALDELGL 410 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H E D + + ++ F ++ + G Sbjct: 411 PYVVNEGDGAFYGPKIDFHLE---DCIGRTWQCGTIQLD----FQLPQRF----ELEYTG 459 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + G++ ++ G W +AP ++ ++ I D Sbjct: 460 ADGEKHRPIMIHRVVFGSIERFIGILIEHFAGAFPTW---LAPVQVKVLPISDK---YAD 513 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+Y LS+ G D E+IG + A P ++VG K + V ++ R Sbjct: 514 YAAKVYESLSEAGIRAEVDTRSEKIGYKIREAQTNKIPYMLVVGQKEEEEGTVSVRSRFA 573 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G SLE I ++ Sbjct: 574 GDEGASSLESFIEKIQKEIASK 595 >gi|187929057|ref|YP_001899544.1| threonyl-tRNA synthetase [Ralstonia pickettii 12J] gi|238691850|sp|B2UGJ8|SYT_RALPJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|187725947|gb|ACD27112.1| threonyl-tRNA synthetase [Ralstonia pickettii 12J] Length = 635 Score = 273 bits (697), Expect = 5e-71, Method: Composition-based stats. Identities = 82/442 (18%), Positives = 147/442 (33%), Gaps = 41/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L I ++S G W P G + +R G Sbjct: 231 YLHMLEEAEKRDHRKLGRELDLF--HIDEYSPGTVFWHPKGWTLWQEIEQYMRRVYRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D Y + M + + + P + I++ IKSY Sbjct: 289 YQEVKGPQILDKTLWEKTGHWDKYRENMF-ITESEKREYALKPMNCPGHILIYKQGIKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F + R+E G+MR R F D + F T + + ++ Sbjct: 348 RDLPLRFGEFGACHRNEPSGGLHGIMRVRGFTQDDGHIFC-TEDMIQAEVTAFTTLLQKV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I + + P + E D + Sbjct: 407 YKDFGFTEILYKLSTRPDKRIGTEE-----------------SWDRAEAALAEGLRASGC 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D+L + ++ + A F G Sbjct: 450 EFEYLPGEGAFYGPKIEY---VLKDALGRQWQCGTIQVDPNLP--------ERLDAEFVG 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG H + +G++ ++ + G W V +S+ + Sbjct: 499 EDGARHRPIMLHRAIVGSLERFIGILIEQYAGALPTWLSPVQVVVLSIT------DSHAE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L K G D E+IG + + P QV+VG K +++V ++ R Sbjct: 553 YAQSVAQSLQKQGFRAVVDLRNEKIGYKIREHSVQKVPYQVVVGDKERDENQVAVRARGN 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M L + + +N Sbjct: 613 VDLGSMPLSAFVERLKNDLANK 634 >gi|146295981|ref|YP_001179752.1| threonyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409557|gb|ABP66561.1| Ser-tRNA(Thr) hydrolase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 639 Score = 273 bits (697), Expect = 5e-71, Method: Composition-based stats. Identities = 97/449 (21%), Positives = 170/449 (37%), Gaps = 44/449 (9%) Query: 2 RRSKY--FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 ++S+ +L +L+E R D +L L I + G +LP G + + R Sbjct: 227 KKSQLDEYLTMLEEAKRRDHRKLGRELDLFD--IFEQGPGFPFFLPKGMIIRNILEDFWR 284 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 EE + G E+ P + + DLWV+SG +D Y + M +D+ P + ++ Sbjct: 285 EEHKKRGYQEIKTPIMLTKDLWVQSGHWDHYKENM-YFTKIDDQEFAIKPMNCPGSILVY 343 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + SYR LP ++ L R EL G+MR R F DA+ F L P K + Sbjct: 344 KRKSHSYRELPERLCELGLVHRHELSGVLHGLMRVRCFTQDDAHIFML-PSQIKDEIKGV 402 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 + G K + + P + E +A+T + Sbjct: 403 IDLIDYFYSVFGFKYH-VELSTRPENSMGTDEQWNMAET-----------------ALKE 444 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 +++ I E A Y D H E DSL + + ++ F ++ Sbjct: 445 ALEEVGINYKINEGDGAFYGPKIDFHLE---DSLKRTWQCATIQLD----FQMPERFD-- 495 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + G DG H + G++ A++ + +P +AP +I +I + Sbjct: 496 --LYYIGEDGAKHRPVMLHRVVFGSIERFIAILT---EHFAGAFPVWLAPIQIRVIPVSD 550 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + D KI L + G V D E +G + A L P VIVG K ++ + Sbjct: 551 N---FNDYAAKISQTLKENGFRVEEDFRSETVGYKIRDAQLQKIPYMVIVGEKERRENTI 607 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ R G ++++ ++ + Sbjct: 608 AVRDRKKGDLGSFTIDKFVSMVKEKVEKK 636 >gi|255659698|ref|ZP_05405107.1| threonine--tRNA ligase [Mitsuokella multacida DSM 20544] gi|260848272|gb|EEX68279.1| threonine--tRNA ligase [Mitsuokella multacida DSM 20544] Length = 639 Score = 273 bits (697), Expect = 5e-71, Method: Composition-based stats. Identities = 84/442 (19%), Positives = 162/442 (36%), Gaps = 42/442 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + +H+ G + P G + + R+ R G Sbjct: 233 YLHMLEEAKKRDHRKLGKQLDLFS--LHEEGPGFPFFHPNGMIVRNELINYWRDVHRRYG 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW SG +D Y + M + + P + ++ S SY Sbjct: 291 YQEIKTPIILNRQLWETSGHWDHYKENM-YFTKIDGEDYAIKPMNCPGGMLVYNSKQHSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R E G+ R R F DA+ +TP+ + + + Sbjct: 350 RDLPLRLGELGLVHRHEKSGELHGLFRVRNFTQDDAH-LFVTPDQVEQEIQHTIDLFDEV 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 ++ GL + + P + E + + Sbjct: 409 YNTFGLTYV-AELSTRPDDSMGTDE-----------------DWELATNGLRKALEHRGL 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H L DS+ R + G I + + + T+ G Sbjct: 451 DYIVNEGDGAFYGPKIDFH---LKDSIG-------RTWQCGTI-QYDMQMPEKFNLTYVG 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ ++ + +P +AP + ++ I D Sbjct: 500 EDGEKHRPIMLHRVVYGSIERFIGILI---ENYAGAFPTWLAPVQARILPITDK---QAD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ ++ +G + DD E+IG + + +L P ++VG + ++D V ++ Sbjct: 554 YAYELRKKMFDLGLRIEVDDRSEKIGKKIRESQMLKTPYSLVVGDQEMADGTVAVRKYGE 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 E M +E+ I Y + + Sbjct: 614 QQSETMKVEDFIAYLQEQIATK 635 >gi|297579610|ref|ZP_06941537.1| threonyl-tRNA synthetase [Vibrio cholerae RC385] gi|297535256|gb|EFH74090.1| threonyl-tRNA synthetase [Vibrio cholerae RC385] Length = 642 Score = 273 bits (697), Expect = 5e-71, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 148/442 (33%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ IR++ N G Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHIQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFC-TEDQIQQEVTSCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G ++I ++ + P S E D E + S MD P + Sbjct: 410 TTFGFQNIVVKLSTRPEKRVGSDEIW---DKSEQALIDSLKAMDIPFEIQ---------- 456 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y + L+D L + ++ G AT+ G Sbjct: 457 ----EGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLDFNLPTRLG--------ATYVGE 501 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + V + +G++ ++ + G W +++ D Sbjct: 502 SNERLIPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAIVVNIT------DKQADY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ +L K G D E+IG + L P ++ G + + ++ ++ R Sbjct: 556 AHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTRKGK 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 L++ I + ++ + Sbjct: 616 DLGKFKLDDFIAHIQAEIASRK 637 >gi|163801061|ref|ZP_02194961.1| threonyl-tRNA synthetase [Vibrio sp. AND4] gi|159175410|gb|EDP60207.1| threonyl-tRNA synthetase [Vibrio sp. AND4] Length = 642 Score = 273 bits (697), Expect = 5e-71, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 144/442 (32%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ +R + + G Sbjct: 234 LTRLEEAAKRDHRKLGKQLDLF--HMQQEAPGMVFWHHNGWSIFRDLEVFVRSKLDEYGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLIMDRVLWERSGHWDKYADAMFT-TASENREYALKPMNCPGHVQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFC-TESQIQEEVTSCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +I ++ + P S E D + + + Sbjct: 410 QTFGFDNIVVKLSTRPEQRVGSDE-----------------IWDQSEEALKQSLESMEIP 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y + L+D L + ++ G AT+ G Sbjct: 453 YEIQEGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLDFNLPGRLG--------ATYVGE 501 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + + V + +G++ ++ + G W +++ D Sbjct: 502 NNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAILMNIT------DKQSDY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ +L K G D E+IG + L P ++VG + + ++ ++ R Sbjct: 556 VQEVVQKLQKSGIRAKADLRNEKIGFKIREHTLKRVPYMLVVGDQEMEAGEIAVRTRKGK 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 +++ I Y + + Sbjct: 616 DLGKFKVDDFIAYIQDEIFSRK 637 >gi|306820889|ref|ZP_07454509.1| threonine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551003|gb|EFM38974.1| threonine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 641 Score = 273 bits (697), Expect = 5e-71, Method: Composition-based stats. Identities = 80/443 (18%), Positives = 164/443 (37%), Gaps = 42/443 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + +H+ G + P G + + REE + G Sbjct: 231 YLKLLEEAKLRDHRKLGKELDLFS--MHEEGPGFPFFHPKGMVLRNTLEKFWREEHEKAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW +SG +D Y + M + + P + +++H+ SY Sbjct: 289 YDEIKTPIILNEALWHQSGHWDHYKENM-YFTKIDGEDYAIKPMNCPGSILTYKTHLFSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + ++ R EL G+MR R F DA+ + L + + ++ Sbjct: 348 RDLPLRWAEMGQVHRHELSGALHGLMRVRTFTQDDAHLYVLPSQVKDELIGVIELA---- 403 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 I + ++ V T +++ D ++ Sbjct: 404 ---------------DYIYSIFNFKYHVELSTRPENSMGTQEQWDIATNGLIAALEEKNI 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H L D++ + ++ F ++ + + Sbjct: 449 KYIVNEGDGAFYGPKIDFH---LQDAIGRTWQCGTIQLD----FQMPERFDIH----YID 497 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ++ + + G++ ++ + +P ++P ++ ++ I D Sbjct: 498 SNNEKQRPVMLHRTVFGSIERFIGILI---EHFAGKFPLWLSPVQVKILPISDK---FID 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ + L K+G V D E+IG + A L P +++G K V ++ + ++ R Sbjct: 552 YAYEVQSELKKLGIRVNVDARAEKIGFKIREAQLEKVPYMLVIGEKEVENNTLSVRSRDL 611 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 G M EEVI + Sbjct: 612 GDLGSMKKEEVIEKFVKEIEEKK 634 >gi|269102906|ref|ZP_06155603.1| threonyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP 102761] gi|268162804|gb|EEZ41300.1| threonyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP 102761] Length = 643 Score = 273 bits (697), Expect = 5e-71, Method: Composition-based stats. Identities = 81/442 (18%), Positives = 150/442 (33%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G + +RE+ N+ Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWTIFRELEVFVREKLNQYDY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFC-TESQVQQEVTSCIEMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G ++I ++ + P S + D E + + + MD P + Sbjct: 410 KTFGFENIVVKLSTRPEKRVGSD---AMWDKAEADLVTALESMDIPFEIQ---------- 456 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y + L D L + ++ G AT+ G Sbjct: 457 ----EGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFALPERLG--------ATYVGE 501 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D + H + +G++ ++ + G W +++ + Sbjct: 502 DNERHTPVMIHRAILGSLERFIGILIEDYAGFFPTWLAPQQAVVMNIT------DSQSEY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++I +L K G V D E+IG + L P ++ G + V +V ++ R Sbjct: 556 VQEIVEKLKKCGIRVNADLRNEKIGFKIREHTLKRVPYMLVCGDQEVEAGEVAVRTRKGK 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 +++++ Y S+ + Sbjct: 616 DLGKFKIDDLVAYMQQEISSRK 637 >gi|295677048|ref|YP_003605572.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1002] gi|295436891|gb|ADG16061.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1002] Length = 635 Score = 273 bits (697), Expect = 5e-71, Method: Composition-based stats. Identities = 78/443 (17%), Positives = 149/443 (33%), Gaps = 41/443 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD +L L + S G+ W P G V +R N Sbjct: 229 EAYLHMLEEAEKRDHRKLGKQLDLF--HMQDESPGMVFWHPRGWTLWQQVEQYMRRRVND 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G +E+ P + LW SG + +Y + M + + P + +F ++ Sbjct: 287 AGYLEIKTPLIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFNHGLR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + + R+E G+MR R F+ DA+ F + S + Sbjct: 346 SYRDLPLRYAEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFIGESIAFNT-LAM 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G ++ ++ P + E A+ G + + +P E Sbjct: 405 SVYRDFGFDNVEIKLSLRPDARAGTDETWDRAEQGLREALTACGVTWEELPGE------- 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + H + D+L + + +++ G A + Sbjct: 458 ----------GAFYGPKVEYH---IKDALGRSWQCGTLQLDMVLPERLG--------AEY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D + +G+M ++ H G W + +++ + Sbjct: 497 VAEDNSRRRPIMLHRAIVGSMERFLGILIEHHAGAMPAWLAPMQVVVMNIA------ESQ 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + + L K G V D E+I + L P ++VG K V ++ R Sbjct: 551 AEYAQSLAQSLQKQGVRVEADLRNEKISYKIREHTLEKVPYLLVVGDKEREAQTVAVRAR 610 Query: 422 LTGIREDMSLEEVINYASHRFSN 444 M ++ I + Sbjct: 611 GGVDMGVMPVDAFIERLRQDVQS 633 >gi|270158051|ref|ZP_06186708.1| threonyl-tRNA synthetase [Legionella longbeachae D-4968] gi|269990076|gb|EEZ96330.1| threonyl-tRNA synthetase [Legionella longbeachae D-4968] Length = 639 Score = 273 bits (697), Expect = 6e-71, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 138/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD L L + G+ W P G + +R G Sbjct: 231 YLFRLEEAEKRDHRKLGKSLELF--HFQDIAPGMVFWHPKGWTIYQELERYMRHRLADFG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L LW +SG + ++ EM + + ++ P + +F +KSY Sbjct: 289 YQEIRTPQLVDRVLWEKSGHWANFRDEMF-VTETENRHYAVKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F + R E G+MR R + DA+ F + M + Sbjct: 348 RDLPLRFSEFGNCHRCEPSGSLHGLMRVRNMVQDDAHIFCTEDQIQSE-VAMMLELVQSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I R P S E D + + Sbjct: 407 YTDFGFNEIKYRLALRPEKRVGSDE-----------------VWDKAEAALKQAMKERNI 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ A + Sbjct: 450 EWVDAPGEGAFYGPKIEC---SLSDCLGRIWQCGTIQVDFSMPGRLD--------AIYIA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + +G+ ++ + GK +W V +++ + + Sbjct: 499 EDGSKQTPVMLHRAILGSFERFMGILIEHYAGKLPLWLSPVQAIIMTI------SEKQSE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 EK+ L K G +D E+IG + L P +++G K V +V ++ R Sbjct: 553 YAEKVTQILQKNGIRANFDLRNEKIGFKIREHTLQKIPYLLVIGDKEVESGQVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M+++ + + ++ Sbjct: 613 TDLGLMTIDTICDTLMQEIAHK 634 >gi|83590594|ref|YP_430603.1| threonyl-tRNA synthetase [Moorella thermoacetica ATCC 39073] gi|83573508|gb|ABC20060.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Moorella thermoacetica ATCC 39073] Length = 633 Score = 272 bits (696), Expect = 6e-71, Method: Composition-based stats. Identities = 89/442 (20%), Positives = 162/442 (36%), Gaps = 42/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E RD +L + + +H+ G + G + + REE R G Sbjct: 230 YLHRLEEARKRDHRRLGAQLGIFS--LHEEGPGFPFFHHKGMIIRNELEQFWREEHRRAG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + S LW +SG +D Y + M + P + ++++ SY Sbjct: 288 YLEIRTPVILSRTLWEQSGHWDHYRENM-YFTKIDGADYAIKPMNCPGAILVYKTEQHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R E G+MR R F D++ F L + + + R Sbjct: 347 RDLPLRLAELGLVHRHEKSGVLHGLMRVRAFTQDDSHIFMLPSQIASE-IQGVIDLVDRF 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 ++ G K + + P S E + + + Sbjct: 406 YNLFGFKY-HVELSTRPDNAMGSEE-----------------IWETATSALRQALEAKGM 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ E A Y D H E DSL + ++ F K+ T+ G Sbjct: 448 PYAVNEGDGAFYGPKIDFHLE---DSLGRTWQCGTIQLD----FLMPEKFD----LTYIG 496 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ ++ + G +P +AP ++ ++ I D Sbjct: 497 EDGQKHRPVMIHRVVFGSIERFIGILI---EHYGGSFPVWLAPVQVRVLPITDRH---ND 550 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ A L + G +D ++IG + A + P ++VG K ++ V ++ R Sbjct: 551 YAFKVRAELIRAGIRAEVNDRNDKIGYKIRAAQMEHIPYMLVVGDKEAAEGTVAVRERQA 610 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G + L E I + S Sbjct: 611 GDTGRVPLAEFIARVTREISRR 632 >gi|323493467|ref|ZP_08098589.1| threonyl-tRNA synthetase [Vibrio brasiliensis LMG 20546] gi|323312290|gb|EGA65432.1| threonyl-tRNA synthetase [Vibrio brasiliensis LMG 20546] Length = 642 Score = 272 bits (696), Expect = 7e-71, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 139/443 (31%), Gaps = 42/443 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ +RE+ G Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSIFRDLEVFVREKLTEYGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y + M ++ P + IF +KSYR Sbjct: 292 QEVKGPLIMDRVLWERSGHWDKYAEAMFT-TSSENRDYALKPMNCPGHVQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFC-TESQIQDEVTSCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +I ++ + P S E D + + + Sbjct: 410 QTFGFDNIVVKLSTRPEKRVGSDE-----------------IWDQSEEALKQSLEAMDIP 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y + L D L + ++ G AT+ Sbjct: 453 YEIQEGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFNLPGRLG--------ATYVDE 501 Query: 306 DGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + M I R + +IE + A D Sbjct: 502 NNERQVPVMIHRAILGSLERFIGILIEEYYGFFPTWLSPEQAVIMNIT-------DKQSD 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L K G D E+IG + L P ++ G + + ++ ++ R Sbjct: 555 YVQEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPFMLVCGDQEMEAGEIAVRTRKG 614 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 +++ I+Y S+ + Sbjct: 615 KDLGKFKVDDFISYIQDEISSRK 637 >gi|209516675|ref|ZP_03265528.1| threonyl-tRNA synthetase [Burkholderia sp. H160] gi|209502950|gb|EEA02953.1| threonyl-tRNA synthetase [Burkholderia sp. H160] Length = 635 Score = 272 bits (696), Expect = 8e-71, Method: Composition-based stats. Identities = 78/443 (17%), Positives = 149/443 (33%), Gaps = 41/443 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD +L L + S G+ W P G V +R N Sbjct: 229 EAYLHMLEEAEKRDHRKLGKQLDLF--HMQDESPGMVFWHPRGWTLWQQVEQYMRRRVND 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G +E+ P + LW SG + +Y + M + + P + +F ++ Sbjct: 287 AGYLEIKTPLIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFNHGLR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + + R+E G+MR R F+ DA+ F + S + Sbjct: 346 SYRDLPLRYAEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNT-LAM 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G ++ ++ P + E A+ G + + +P E Sbjct: 405 SVYRDFGFDNVEIKLSLRPDARAGTDETWDRAEQGLREALTACGVTWEELPGE------- 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + H + D+L + + +++ G A + Sbjct: 458 ----------GAFYGPKVEYH---IKDALGRSWQCGTLQLDMVLPERLG--------AEY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D + +G+M ++ H G W + +++ + Sbjct: 497 VAEDNSRRRPIMLHRAIVGSMERFLGILIEHHAGAMPAWLAPMQVVVMNIA------ESQ 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + + L K G V D E+I + L P ++VG K V ++ R Sbjct: 551 AEYAQLLAQSLQKQGVRVEADLRNEKISYKIREHTLEKVPYLLVVGDKEREAQTVAVRAR 610 Query: 422 LTGIREDMSLEEVINYASHRFSN 444 M ++ I + Sbjct: 611 GGVDLGVMPVDTFIERLRQDVQS 633 >gi|152996610|ref|YP_001341445.1| threonyl-tRNA synthetase [Marinomonas sp. MWYL1] gi|189083612|sp|A6VYI1|SYT_MARMS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|150837534|gb|ABR71510.1| threonyl-tRNA synthetase [Marinomonas sp. MWYL1] Length = 645 Score = 272 bits (696), Expect = 8e-71, Method: Composition-based stats. Identities = 78/442 (17%), Positives = 144/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD KL L + + + G+ W P G + V +R++Q Sbjct: 232 YLTRIEEAEKRDHRKLGKKLDLF--HVQEEAPGMVFWHPKGWRLYQAVEQYMRQKQLDNN 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG + Y + M ++ P + ++ +KSY Sbjct: 290 YQEVKTPQIVDRVLWEKSGHWGKYHENMFT-THSENRDYAVKPMNCPCHIQVYNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LPF + R+E G+MR R F+ D + F T + ++ + Sbjct: 349 RDLPFRMAEFGSCHRNEPSGALHGIMRVRNFVQDDGHIFV-TEGQIQQEVSEFIDLLHEV 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G +I R + P S E D + + D Sbjct: 408 YADFGFDNIVYRLSTRPEQRVGSDE-----------------VWDKAEKALSEALDSAGL 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D++ + ++ G A + Sbjct: 451 DWEELPGEGAFYGPKIEF---SLKDAIGRVWQCGTIQVDFSMPTRLG--------AQYVS 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + +G++ ++ +G +W +++ D Sbjct: 500 EDGSRQTPVMLHRAIVGSLERFIGILIEDTEGAFPVWLAPEQVVIMNIT------DRQAD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C + RL+ G D E+IG + L P ++VG K V +V ++ R Sbjct: 554 YCSVLEKRLNSNGFRAKLDLRNEKIGFKIREHTLQRVPYMIVVGDKEVEQEQVAVRTRTG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS+ + + Sbjct: 614 EDLGVMSISDFEGLLQQEIARR 635 >gi|153814564|ref|ZP_01967232.1| hypothetical protein RUMTOR_00778 [Ruminococcus torques ATCC 27756] gi|317501270|ref|ZP_07959474.1| threonine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA] gi|145848058|gb|EDK24976.1| hypothetical protein RUMTOR_00778 [Ruminococcus torques ATCC 27756] gi|316897337|gb|EFV19404.1| threonine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA] Length = 641 Score = 272 bits (695), Expect = 8e-71, Method: Composition-based stats. Identities = 96/444 (21%), Positives = 164/444 (36%), Gaps = 41/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L M+ + G +LP G + + RE R Sbjct: 229 EYLTMIEEAKKRDHRKLGKELGLF--MMREEGPGFPFFLPNGMVLKNTLLDYWREIHRRA 286 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G +E++ P + S LW SG +D Y + M +++ P + ++ S +S Sbjct: 287 GYVEINTPIMLSRHLWETSGHWDHYKENMYT-TVVDEEDFAIKPMNCPGGILVYESEPRS 345 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ L R E + G+MR R F DA+ F +TPE K + Sbjct: 346 YRDLPIRMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIF-MTPEQIKDEIKGVVKLIDE 404 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G K + + P S E + + + DDI Sbjct: 405 VYSLFGFKYH-VELSTRPDDSMGSDE-----------------DWEMATDALRSALDDIG 446 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H E DS+ + ++ F ++ + Sbjct: 447 LPYIVNEGDGAFYGPKIDFHLE---DSIGRTWQCGTIQLD----FQLPLRF----ELEYT 495 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 GADG+ H + G++ ++ G W +AP ++ ++ I Sbjct: 496 GADGEKHRPIMIHRVVFGSIERFIGILIEHFAGAFPTW---LAPVQVKVLPISDK---YL 549 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D K+ L + G D E+IG + A + P ++VG+K + KV ++ R Sbjct: 550 DYAGKVLEDLKEAGIRAEIDSRAEKIGYKIREAQMKKIPYMLVVGAKEEEEGKVSVRSRF 609 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 G LEE I + + Sbjct: 610 AGDEGQCGLEEFIEQIKEEVAAKK 633 >gi|156974364|ref|YP_001445271.1| threonyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116] gi|166225516|sp|A7N009|SYT_VIBHB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|156525958|gb|ABU71044.1| hypothetical protein VIBHAR_02079 [Vibrio harveyi ATCC BAA-1116] Length = 642 Score = 272 bits (695), Expect = 8e-71, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 144/442 (32%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ +R + + G Sbjct: 234 LTRLEEAAKRDHRKLGKQLDLF--HMQQEAPGMVFWHHNGWSIFRDLEVFVRSKLDEYGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLIMDRVLWERSGHWDKYADAMFT-TSSENREYALKPMNCPGHVQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFC-TESQIQEEVTNCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +I ++ + P S E D + + + Sbjct: 410 QTFGFDNIVVKLSTRPEKRVGSDE-----------------IWDQSEEALKQSLESMEIP 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y + L+D L + ++ G AT+ G Sbjct: 453 YEIQEGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLDFNLPGRLG--------ATYVGE 501 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + + V + +G++ ++ + G W +++ D Sbjct: 502 NNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQVILMNIT------DKQSDY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ +L K G D E+IG + L P ++VG + + ++ ++ R Sbjct: 556 VQEVVQKLQKSGIRAKADLRNEKIGFKIREHTLKRVPYMLVVGDQEMEAGEIAVRTRKGK 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 +++ I Y S + Sbjct: 616 DLGKFKVDDFIAYIQDEISIRK 637 >gi|94971761|ref|YP_593809.1| threonyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345] gi|94553811|gb|ABF43735.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345] Length = 659 Score = 272 bits (695), Expect = 8e-71, Method: Composition-based stats. Identities = 85/449 (18%), Positives = 160/449 (35%), Gaps = 38/449 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNR 63 +YF + + RD + +L L + I + + G+ W P G + +REE + Sbjct: 244 EYFAKLEEAKKRDHRVLGKQLDLFS--IQELAGPGLIFWHPKGGIIRKEMEDWMREEYLK 301 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + DLW SG Y + + +D + P + I+R ++ Sbjct: 302 RGYSLVVTPHVARTDLWKISGHTGYYKQNFFTPMELDDAEYMLKPMNCPGHVLIYRDQLR 361 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP ++ +R E G++R R F DA+ F TP + + + Sbjct: 362 SYRDLPMRLGEMGTVYRYERSGVMHGLLRVRGFTQDDAHIFC-TPSQIEDEISGCIDFAI 420 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPSENTDFDD 241 + H G + D + + F + + + S D Sbjct: 421 SVLHTYGFNEFKVELS--------------EWDPNDRKSFIGTDEQWNLAQGSLKKVLDA 466 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y DV KL D++ ++S + F ++ Sbjct: 467 RGIPYKSMPGEAAFYGPKIDV---KLVDAIGRLWQLSTVQFD----FTLPQRF----ELE 515 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G DGK H + G++ V+ + +P ++P + L+ I + Sbjct: 516 YVGEDGKRHQPLMVHRALYGSIERFFGVLI---EHYAGAFPVWLSPVQTVLVPIG---EK 569 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + K+ L G V D E++ ++ L P ++VG K + V ++ Sbjct: 570 HLEYANKVGDVLKAKGIRVEVDGRNEKMNAKIREHALQKVPFILVVGDKEAEATSVNVRT 629 Query: 421 RLTGIREDMSLEEVINYASHRFSNNRPVL 449 R E + L+ + + +P L Sbjct: 630 RGKDKTETVPLDSFVERIEKLIAEKKPTL 658 >gi|114566616|ref|YP_753770.1| threonyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122318333|sp|Q0AY05|SYT_SYNWW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|114337551|gb|ABI68399.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 635 Score = 272 bits (695), Expect = 9e-71, Method: Composition-based stats. Identities = 84/442 (19%), Positives = 150/442 (33%), Gaps = 41/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + G +LP G + + REE + G Sbjct: 231 YLQKLEEAKKRDHRRLGRELGLFVVL--DEGPGFPFFLPKGMVLRNELENFWREEHRKAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + S +LW SG +D Y M ++ P + +++ ++ SY Sbjct: 289 YQEIRTPIILSRELWERSGHWDHYKDNM-YFTTIDEGDYAIKPMNCPGGLLVYKQNLHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 + LP ++ L R E+ G+MR R F DA+ F L + + + Sbjct: 348 KELPLRMGEMGLVHRHEMSGVLHGLMRVRAFTQDDAHIFMLPEQIIDE-----IKGVMDL 402 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 R + V T + S + + + ++ Sbjct: 403 VDRFYSLFGFP--------------YHVELSTKPEKAMGSDEIWEVATNALIKALEERGM 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H + D R + G I + T+ G Sbjct: 449 EYKVNEGDGAFYGPKIDFHLQDSLD----------RTWQCGTI-QLDFQMPEKFDLTYVG 497 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG H + G++ ++ + G +P +AP ++ ++ I Q D Sbjct: 498 EDGGKHRPVMIHRVIYGSIERFIGILT---EHFGGAFPLWLAPVQVRVLPITQRSQ---D 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ A L + G V D E+IG + L P +++G + + V ++HR Sbjct: 552 YARQVVAELEQAGIRVEADFRSEKIGYKIREGQLQKIPYLLVLGDREAEEGTVSVRHRKE 611 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G LEE + Sbjct: 612 GDLGAKLLEEFKQTIVKEIKDK 633 >gi|171318442|ref|ZP_02907597.1| threonyl-tRNA synthetase [Burkholderia ambifaria MEX-5] gi|171096356|gb|EDT41258.1| threonyl-tRNA synthetase [Burkholderia ambifaria MEX-5] Length = 635 Score = 272 bits (695), Expect = 9e-71, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 148/443 (33%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + S G+ W P G V +R N G Sbjct: 231 YLHMLEEAEKRDHRKLGKQLDLF--HMQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + + P + +F+ ++SY Sbjct: 289 YLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFKHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ DA+ F + S + + Sbjct: 348 RDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQFIAESIAFNT-LAMSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ P + E A+ G + +P E Sbjct: 407 YKDFGFEHIDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLSWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + +++ G A + Sbjct: 458 --------GAFYGPKIEYH---IKDALGRSWQCGTLQLDMVLPERLG--------AEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G W +++ + + Sbjct: 499 EDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPAWLAPFQAVVLNIA------ESQVE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + L K G V D E+I + L P ++VG K V ++ R Sbjct: 553 YAHSLTQTLQKQGVRVAGDLRNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 M +E + + + Sbjct: 613 VDLGVMPIEAFVERLQEDLRSFK 635 >gi|169334538|ref|ZP_02861731.1| hypothetical protein ANASTE_00941 [Anaerofustis stercorihominis DSM 17244] gi|169259255|gb|EDS73221.1| hypothetical protein ANASTE_00941 [Anaerofustis stercorihominis DSM 17244] Length = 637 Score = 272 bits (695), Expect = 9e-71, Method: Composition-based stats. Identities = 88/444 (19%), Positives = 158/444 (35%), Gaps = 42/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD + L MI + G +LP G + + REE + Sbjct: 231 EYLAMLEEAKKRDHRKIGKDMDLF--MICEEGPGFPFFLPKGMVIRNELENFWREEHRKR 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + + LW SG +D Y M +D P + +++ + S Sbjct: 289 GYQEIKTPLILNEQLWHTSGHWDHYKDNM-YFTRIDDNDYAIKPMNCPGSMLVYKRKMWS 347 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ R EL G+MR R F DA+ F L + + + Sbjct: 348 YRDLPLRIGEMGQVHRHELSGALHGLMRVRTFTQDDAHIFMLPEQIKEE-VIGVIDFIDY 406 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 +++ G K + + P S E + + ++ Sbjct: 407 VYNMFGFKY-HVELSTRPDDSMGSDE-----------------DWNMATEALREAMEEKG 448 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H E D L + ++ F ++ T+ Sbjct: 449 MDYVVNEGDGAFYGPKLDFHLE---DCLGRTWQCGTIQLD----FQMPQRFD----LTYI 497 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG+ H + G++ ++ + +P +AP + LI I + Sbjct: 498 GHDGEKHRPVMIHRVIFGSIERFIGILT---EHFAGAFPLWLAPVQAKLIPITDRN---L 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + + I +L + G DD E++G + A L P +I G + + + + ++ R Sbjct: 552 EYVKGIKDKLEQKGIRCEIDDRSEKMGYKIREAQLEKVPYMIIAGDRDMENGVISVRARK 611 Query: 423 TGI-REDMSLEEVINYASHRFSNN 445 G MS++E IN A Sbjct: 612 DGEDLGAMSVDEFINKAVKEIEEK 635 >gi|170701132|ref|ZP_02892106.1| threonyl-tRNA synthetase [Burkholderia ambifaria IOP40-10] gi|170133954|gb|EDT02308.1| threonyl-tRNA synthetase [Burkholderia ambifaria IOP40-10] Length = 635 Score = 272 bits (695), Expect = 9e-71, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 148/443 (33%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + S G+ W P G V +R N G Sbjct: 231 YLHMLEEAEKRDHRKLGKQLDLF--HMQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + + P + +F+ ++SY Sbjct: 289 YLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFKHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ DA+ F + S + + Sbjct: 348 RDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQFIAESIAFNT-LAMSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ P + E A+ G + +P E Sbjct: 407 YKDFGFEHIDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLSWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + +++ G A + Sbjct: 458 --------GAFYGPKIEYH---IKDALGRSWQCGTLQLDMVLPERLG--------AEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G W +++ + + Sbjct: 499 EDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPAWLAPFQAVVLNIA------ESQVE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + L K G V D E+I + L P ++VG K V ++ R Sbjct: 553 YAHSLTQTLQKQGVRVAGDLRNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 M +E + + + Sbjct: 613 VDLGVMPIEAFVERLQEDLRSFK 635 >gi|116328741|ref|YP_798461.1| threonine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331652|ref|YP_801370.1| threonine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122280605|sp|Q04R58|SYT_LEPBJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|122283474|sp|Q04ZG7|SYT_LEPBL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|116121485|gb|ABJ79528.1| Threonine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125341|gb|ABJ76612.1| Threonine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 639 Score = 272 bits (695), Expect = 9e-71, Method: Composition-based stats. Identities = 72/443 (16%), Positives = 144/443 (32%), Gaps = 42/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L + + G W P G +++ +R E N+ Sbjct: 234 QYLFQIEEAKKRDHRKIGKELDLFS--FQKEGPGFPFWHPKGTILWNSLADYLRAECNKR 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + S++LW +SG +D++ + M D +++ P + + I++ H+ S Sbjct: 292 GYQEIKTPAVLSSELWKKSGHWDNFHENM-YFTDIDEEDYALKPMNCPGCSLIYKHHLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP F + R EL G+ R R F D++ + + Sbjct: 351 YRELPLRFAEFGSVHRHELHGVLHGLFRVRAFTQDDSHIYAPLEHLESE-VTDIIDFTFT 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ + G + P E +F + + Sbjct: 410 VYKKFGFSEFKTFIATRPEKSQGRDE-----------------DWEFATNTLKQSLEKKG 452 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E A Y + + DS+ + ++ + Sbjct: 453 IPYGIKEGEGAFYGPKIEF---NIKDSIGRLWQCGTIQVDFSMP--------ERFELDYT 501 Query: 304 GADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 +DG+ M I R + +IE + + + Sbjct: 502 DSDGQKKRPVMIHRAIYGSLERFIGILIEHYEGKFPLWISPNQIRILTIT-------EKV 554 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + +Y L G V D E+IG++ + L +I+G K + + ++ R Sbjct: 555 AEYAKDVYCELVDAGFRVELDTRNEKIGAKIRDSILKKANYLLILGEKEMESGTLAVRKR 614 Query: 422 LTGIREDMSLEEVINYASHRFSN 444 + ++ I+ + Sbjct: 615 GQEDTKTLTRSGFISNLQDEIKS 637 >gi|187924732|ref|YP_001896374.1| threonyl-tRNA synthetase [Burkholderia phytofirmans PsJN] gi|238689588|sp|B2SZG2|SYT_BURPP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|187715926|gb|ACD17150.1| threonyl-tRNA synthetase [Burkholderia phytofirmans PsJN] Length = 635 Score = 272 bits (695), Expect = 1e-70, Method: Composition-based stats. Identities = 78/443 (17%), Positives = 148/443 (33%), Gaps = 41/443 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD +L L + S G+ W P G V +R N Sbjct: 229 EAYLHMLEEAEKRDHRKLGKQLDLF--HMQDESPGMVFWHPRGWTLWQQVEQYMRRRVND 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G +E+ P + LW SG + +Y + M + + P + +F ++ Sbjct: 287 AGYLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFNHGLR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + + R+E G+MR R F+ DA+ F + S + Sbjct: 346 SYRDLPLRYAEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNT-LAM 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G ++ ++ P + E A+ G + + +P E Sbjct: 405 SVYKDFGFDNVEIKLSLRPDARAGTDETWDRAEQGLREALTACGVTWEELPGE------- 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + H + D+L + + +++ G A + Sbjct: 458 ----------GAFYGPKVEYH---IKDALGRSWQCGTLQLDMVLPERLG--------AEY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D + +G+M ++ H G W + +++ + Sbjct: 497 VAEDNSRRRPIMLHRAIVGSMERFLGILIEHHAGAMPAWLAPMQVVVMNIA------ESQ 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + + L K G V D E+I + L P ++VG K V ++ R Sbjct: 551 AEYAQSLAQSLQKQGVRVEADLRNEKISYKIREHTLEKVPYLLVVGDKEREAQTVAVRAR 610 Query: 422 LTGIREDMSLEEVINYASHRFSN 444 M + I + Sbjct: 611 GGVDLGVMPPDTFIERLRQDVQS 633 >gi|115351412|ref|YP_773251.1| threonyl-tRNA synthetase [Burkholderia ambifaria AMMD] gi|122323391|sp|Q0BG06|SYT_BURCM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|115281400|gb|ABI86917.1| Ser-tRNA(Thr) hydrolase [Burkholderia ambifaria AMMD] Length = 635 Score = 271 bits (694), Expect = 1e-70, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 148/443 (33%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + S G+ W P G V +R N G Sbjct: 231 YLHMLEEAEKRDHRKLGKQLDLF--HMQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + + P + +F+ ++SY Sbjct: 289 YLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFKHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ DA+ F + S + + Sbjct: 348 RDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQFIAESIAFNT-LAMSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ P + E A+ G + +P E Sbjct: 407 YKDFGFEHIDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLSWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + +++ G A + Sbjct: 458 --------GAFYGPKIEYH---IKDALGRSWQCGTLQLDMVLPERLG--------AEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G W +++ + + Sbjct: 499 EDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPAWLAPFQAVVLNIA------ESQVE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + L K G V D E+I + L P ++VG K V ++ R Sbjct: 553 YAHSLTQTLQKQGVRVAGDLRNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 M +E + + + Sbjct: 613 VDLGVMPIEAFVERLQEDLRSFK 635 >gi|261212792|ref|ZP_05927076.1| threonyl-tRNA synthetase [Vibrio sp. RC341] gi|260837857|gb|EEX64534.1| threonyl-tRNA synthetase [Vibrio sp. RC341] Length = 642 Score = 271 bits (694), Expect = 1e-70, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 147/442 (33%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ IR++ N G Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHIQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFC-TEDQIQQEVTSCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G ++I ++ + P S E D E + S MD P + Sbjct: 410 TTFGFQNIVVKLSTRPEKRVGSDEIW---DKSEQALIDSLKAMDIPFEIQ---------- 456 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y + L+D L + ++ G AT+ G Sbjct: 457 ----EGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLDFNLPTRLG--------ATYVGE 501 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + V + +G++ ++ + G W +++ D Sbjct: 502 SNERLIPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVVVNIT------DKQADY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ +L K G D E+IG + L P ++ G + + ++ ++ R Sbjct: 556 AHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTRKGK 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 L++ I + + + Sbjct: 616 DLGKFKLDDFIEHIQAEIVSRK 637 >gi|328472989|gb|EGF43837.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus 10329] Length = 642 Score = 271 bits (694), Expect = 1e-70, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 144/442 (32%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ +R++ N Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSIFRDLEVFVRDKLNEYDY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFC-TESQIQEEVTSCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +I ++ + P S E D + + + Sbjct: 410 QTFGFDNIVVKLSTRPEKRVGSDE-----------------IWDQSEEALKQSLESMEIP 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y + L+D L + ++ G AT+ G Sbjct: 453 YEIQEGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLDFNLPGRLG--------ATYVGE 501 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + + V + +G++ ++ + G W +++ Sbjct: 502 NNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVLMNIT------DKQSGY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++I +L K G D E+IG + L P ++VG + + ++ ++ R Sbjct: 556 VQEIVQKLQKSGIRAKADLRNEKIGFKIREHTLKRVPYMLVVGDQEMEAGEIAVRTRKGK 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 +++ I Y S+ + Sbjct: 616 DLGKFKVDDFIAYIQDEISSRK 637 >gi|172060451|ref|YP_001808103.1| threonyl-tRNA synthetase [Burkholderia ambifaria MC40-6] gi|238689138|sp|B1YP13|SYT_BURA4 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|171992968|gb|ACB63887.1| threonyl-tRNA synthetase [Burkholderia ambifaria MC40-6] Length = 635 Score = 271 bits (694), Expect = 1e-70, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 148/443 (33%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + S G+ W P G V +R N G Sbjct: 231 YLHMLEEAEKRDHRKLGKQLDLF--HMQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + + P + +F+ ++SY Sbjct: 289 YLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFKHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ DA+ F + S + + Sbjct: 348 RDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQFIAESIAFNT-LAMSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ P + E A+ G + +P E Sbjct: 407 YKDFGFEHIDIKLSLRPEQRAGTDETWDRAEQGLRDALTACGLSWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + +++ G A + Sbjct: 458 --------GAFYGPKIEYH---IKDALGRSWQCGTLQLDMVLPERLG--------AEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G W +++ + + Sbjct: 499 EDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPAWLAPFQAVVLNIA------ESQAE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + L K G V D E+I + L P ++VG K V ++ R Sbjct: 553 YAHSLTQTLQKQGVRVAGDLRNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 M +E + + + Sbjct: 613 VDLGVMPIEAFVERLQEDLRSFK 635 >gi|91784428|ref|YP_559634.1| threonyl-tRNA synthetase [Burkholderia xenovorans LB400] gi|123358618|sp|Q13WF7|SYT_BURXL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|91688382|gb|ABE31582.1| Ser-tRNA(Thr) hydrolase [Burkholderia xenovorans LB400] Length = 635 Score = 271 bits (694), Expect = 1e-70, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 148/443 (33%), Gaps = 41/443 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD +L L + S G+ W P G V +R N Sbjct: 229 EAYLHMLEEAEKRDHRKLGKQLDLF--HMQDESPGMVFWHPRGWTLWQQVEQYMRRRVND 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G +E+ P + LW SG + +Y + M + + P + +F ++ Sbjct: 287 AGYLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFNHGLR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + + R+E G+MR R F+ DA+ F + S + Sbjct: 346 SYRDLPLRYAEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNT-LAM 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G + ++ P + E A+ G + + +P E Sbjct: 405 SVYKDFGFDHVEIKLSLRPDARAGTDETWDRAEQGLREALTACGVTWEELPGE------- 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + H + D+L + + +++ G A + Sbjct: 458 ----------GAFYGPKVEYH---IKDALGRSWQCGTLQLDMVLPERLG--------AEY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D + +G+M ++ H G W + +++ + Sbjct: 497 VAEDNSRRRPIMLHRAIVGSMERFLGILIEHHAGAMPAWLAPMQVVVMNIA------ESQ 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + + L K G V D E+I + L P ++VG K V ++ R Sbjct: 551 TEYAQSLAQSLQKQGVRVAADLRNEKISYKIREHTLEKVPYLLVVGDKEREAQTVAVRAR 610 Query: 422 LTGIREDMSLEEVINYASHRFSN 444 M L+ I + Sbjct: 611 GGVDLGVMPLDTFIERLRQDVQS 633 >gi|54298706|ref|YP_125075.1| threonyl-tRNA synthetase [Legionella pneumophila str. Paris] gi|73919801|sp|Q5X1H3|SYT_LEGPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|53752491|emb|CAH13923.1| Threonyl tRNA synthetase [Legionella pneumophila str. Paris] Length = 637 Score = 271 bits (694), Expect = 1e-70, Method: Composition-based stats. Identities = 78/440 (17%), Positives = 142/440 (32%), Gaps = 40/440 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD L L + G+ W P G + +R Sbjct: 230 EYLFRLEEAEKRDHRKLGKALDLF--HFQDIAPGMVFWHPKGWTIYQELEHYMRNRLVDF 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P L LW +SG + ++ EM + + ++ P I+ +KS Sbjct: 288 GYQEIRTPQLVDRSLWEKSGHWANFRDEMF-VTETENRHYAVKPMSCPCHVQIYNHGLKS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + R E G+MR R + DA+ F + M Sbjct: 347 YRDLPLRLSEFGNCHRCEPSGALHGLMRVRNMVQDDAHIFCTEDQIQSE-VAMMLELVQS 405 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G I R P S + A+T ++ P E Sbjct: 406 VYKDFGFTEIKYRLALRPEKRVGSDDVWDKAETALKLAMLGRNIEWVDAPGE-------- 457 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 A Y + L D L + ++ A++ Sbjct: 458 ---------GAFYGPKIEC---SLSDCLGRIWQCGTIQVDFSMPARL--------EASYV 497 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG + +G+ ++ + GK +W V +++ + Sbjct: 498 AEDGSKQTPVMLHRAILGSFERFMGILIEHYAGKLPLWLSPVQAVVLTI------SEKQN 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + EK+ L K G +D E+IG + L P ++VG K V + +V ++ R Sbjct: 552 EYAEKVRKTLQKRGIRANFDLRNEKIGFKIREHTLQKIPYLLVVGDKEVENCQVAVRTRD 611 Query: 423 TGIREDMSLEEVINYASHRF 442 M+++ + + + Sbjct: 612 GIDLGVMTIDTICDTLTQEI 631 >gi|258625495|ref|ZP_05720387.1| threonyl-tRNA synthetase [Vibrio mimicus VM603] gi|258582201|gb|EEW07058.1| threonyl-tRNA synthetase [Vibrio mimicus VM603] Length = 642 Score = 271 bits (694), Expect = 1e-70, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 148/442 (33%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + + RD +L L + Q + G+ W G ++ IR++ N G Sbjct: 234 LIRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHIQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFC-TEDQIQQEVTSCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G ++I ++ + P S E D E + S M+ P + Sbjct: 410 TTFGFQNIVVKLSTRPEKRVGSDEIW---DKSEQALIDSLKAMEIPFEIQ---------- 456 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y + L+D L + ++ G AT+ G Sbjct: 457 ----EGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLDFNLPTRLG--------ATYVGE 501 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + V + +G++ ++ + G W +++ D Sbjct: 502 SNERLIPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQVVVVNIT------DKQADY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ +L K G D E+IG + L P ++ G + + ++ ++ R Sbjct: 556 AHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTRKGK 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 L++ I + + + Sbjct: 616 DLGKFKLDDFIKHIQAEIVSRK 637 >gi|28898054|ref|NP_797659.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633] gi|260362413|ref|ZP_05775365.1| threonine--tRNA ligase [Vibrio parahaemolyticus K5030] gi|260878403|ref|ZP_05890758.1| threonine--tRNA ligase [Vibrio parahaemolyticus AN-5034] gi|31340445|sp|Q87Q70|SYT_VIBPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|28806268|dbj|BAC59543.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633] gi|308091059|gb|EFO40754.1| threonine--tRNA ligase [Vibrio parahaemolyticus AN-5034] gi|308115583|gb|EFO53123.1| threonine--tRNA ligase [Vibrio parahaemolyticus K5030] Length = 642 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 144/442 (32%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ +R++ N Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSIFRDLEVFVRDKLNEYDY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFC-TESQIQEEVTSCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +I ++ + P S E D + + + Sbjct: 410 QTFGFDNIVVKLSTRPEKRVGSDE-----------------IWDQSEEALKQSLESMEIP 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y + L+D L + ++ G AT+ G Sbjct: 453 YEIQEGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLDFNLPGRLG--------ATYVGE 501 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + + V + +G++ ++ + G W +++ Sbjct: 502 NNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVLMNIT------DKQSGY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++I +L K G D E+IG + L P ++VG + + ++ ++ R Sbjct: 556 VQEIVQKLQKSGIRAKADLRNEKIGFKIREHTLKRVPYMLVVGDQEMEAGEIAVRTRKGK 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 +++ I Y S+ + Sbjct: 616 DLGKFKVDDFIAYIQDEISSRK 637 >gi|332981193|ref|YP_004462634.1| Ser-tRNA(Thr) hydrolase [Mahella australiensis 50-1 BON] gi|332698871|gb|AEE95812.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Mahella australiensis 50-1 BON] Length = 637 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 80/446 (17%), Positives = 159/446 (35%), Gaps = 41/446 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L + +H+ G + P G + + R+E + Sbjct: 230 EYLTRIEEAKQRDHRKLGQELDLFS--LHEEGPGFPFFHPKGMIIRNVLEDFWRKEHRKH 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + + +LW++SG +D Y M +D+ P + +++ + S Sbjct: 288 GYEEIKTPIILNKELWIQSGHWDHYKDNM-YFTKIDDQDYAIKPMNCPGSMIMYKRTMHS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 Y+ LP ++ L R E G+MR R F DA+ F L + + + Sbjct: 347 YKELPIRLCELGLVHRHEKSGVLHGLMRVRCFTQDDAHIFMLPSQVTDE-IIGVIDLIDY 405 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + G K + + P + E + + Sbjct: 406 FYSLFGFKYH-VELSTRPEDSMGTDE-----------------QWEMATEALKVALGKKG 447 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H E DS+ + ++ F ++ T+ Sbjct: 448 LDYKVNEGDGAFYGPKIDFHLE---DSIGRTWQCGTIQLD----FQMPERFD----LTYI 496 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G D + H + G++ A++ + G W +AP ++ ++ I Sbjct: 497 GEDSEKHRPVMLHRVIFGSIERFIAILTEHYAGALPTW---LAPVQVKILPITDRS---L 550 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + + L ++ D+ E+IG + A + P +++G K V + V ++ R Sbjct: 551 EYARSLQMHLEELDIRTELDNRNEKIGYKIRAAQIEKVPYMLVIGDKEVENVAVSVRSRS 610 Query: 423 TGIREDMSLEEVINYASHRFSNNRPV 448 G MS+++ N + + + Sbjct: 611 KGDMGSMSVDDFENLIKTEIKSKKAI 636 >gi|312128091|ref|YP_003992965.1| threonyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108] gi|311778110|gb|ADQ07596.1| threonyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108] Length = 639 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 97/449 (21%), Positives = 170/449 (37%), Gaps = 44/449 (9%) Query: 2 RRSKY--FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 ++S+ +L +L+E R D +L L I + G +LP G + + R Sbjct: 227 KKSQLDEYLTMLEEAKRRDHRKLGRELDLFD--IFEEGPGFPFFLPKGMIIRNILEDFWR 284 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 EE + G E+ P + + DLWV+SG +D Y + M +D+ P + ++ Sbjct: 285 EEHKKRGYQEIKTPIMLTKDLWVQSGHWDHYKENM-YFTKIDDQEFAIKPMNCPGSILVY 343 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + SYR LP ++ L R EL G+MR R F DA+ F L P K + Sbjct: 344 KRKSHSYRELPERLCELGLVHRHELSGVLHGLMRVRCFTQDDAHIFML-PSQIKDEIKGV 402 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 + G K + + P + E +A+T + Sbjct: 403 IDLIDYFYSVFGFKYH-VELSTRPEISMGTDEQWNMAET-----------------ALKE 444 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 +++ I E A Y D H E DSL + + ++ F ++ Sbjct: 445 ALEEVGIDYKINEGDGAFYGPKIDFHLE---DSLKRTWQCATIQLD----FQMPERFD-- 495 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + G DG H + G++ A++ + +P +AP +I +I + Sbjct: 496 --LYYIGEDGAKHRPVMLHRVVFGSIERFIAILT---EHFAGAFPVWLAPTQIRVIPVSD 550 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + D KI L + G V D E +G + A L P VIVG K ++ + Sbjct: 551 N---FNDYAAKISQTLKENGFRVEEDYRSETVGYKIRDAQLQKIPYMVIVGEKERRENTI 607 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ R G ++++ ++ + Sbjct: 608 AVRDRKKGDLGSFTIDKFVSMVKEKVEKK 636 >gi|262164341|ref|ZP_06032079.1| threonyl-tRNA synthetase [Vibrio mimicus VM223] gi|262026721|gb|EEY45388.1| threonyl-tRNA synthetase [Vibrio mimicus VM223] Length = 642 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 147/442 (33%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ IR++ N G Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHIQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFC-TEDQIQQEVTSCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G ++I ++ + P S E D E + S MD P + Sbjct: 410 TTFGFQNIVVKLSTRPEKRVGSDEIW---DKSEQALIDSLKAMDIPFEIQ---------- 456 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y + L+D L + ++ G AT+ G Sbjct: 457 ----EGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLDFNLPTRLG--------ATYVGE 501 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + V + +G++ ++ + G W +++ D Sbjct: 502 SNERLIPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVVVNIT------DKQADY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ +L K G D E+IG + L P ++ G + + ++ ++ R Sbjct: 556 AHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTRKGK 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 L++ I + + + Sbjct: 616 DLGKFKLDDFIKHIQAEIVSRK 637 >gi|331089982|ref|ZP_08338872.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA] gi|330402896|gb|EGG82462.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA] Length = 641 Score = 271 bits (693), Expect = 2e-70, Method: Composition-based stats. Identities = 96/444 (21%), Positives = 164/444 (36%), Gaps = 41/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L M+ + G +LP G + + RE R Sbjct: 229 EYLTMIEEAKKRDHRKLGKELGLF--MMREEGPGFPFFLPNGMVLKNTLLDYWREIHRRA 286 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G +E++ P + S LW SG +D Y + M +++ P + ++ S +S Sbjct: 287 GYVEINTPIMLSRHLWETSGHWDHYKENMYT-TVVDEEDFAIKPMNCPGGILVYESEPRS 345 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ L R E + G+MR R F DA+ F +TPE K + Sbjct: 346 YRDLPIRMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIF-MTPEQIKDEIKGVVKLIDE 404 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G K + + P S E + + + DDI Sbjct: 405 VYSLFGFKYH-VELSTRPDDSMGSDE-----------------DWEMATDALRSALDDIG 446 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H E DS+ + ++ F ++ + Sbjct: 447 LPYIVNEGDGAFYGPKIDFHLE---DSIGRTWQCGTIQLD----FQLPLRF----ELEYT 495 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 GADG+ H + G++ ++ G W +AP ++ ++ I Sbjct: 496 GADGEKHRPIMIHRVVFGSIERFIGILIEHFAGAFPTW---LAPVQVKVLPISDK---YL 549 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D K+ L + G D E+IG + A + P ++VG+K + KV ++ R Sbjct: 550 DYAGKVLEDLKEAGIRAEIDSRAEKIGYKIREAQMKKIPYMLVVGAKEEEEGKVSVRSRF 609 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 G LEE I + + Sbjct: 610 VGDEGQCGLEEFIEQIKEEVAAKK 633 >gi|148358548|ref|YP_001249755.1| threonyl tRNA synthase [Legionella pneumophila str. Corby] gi|296108363|ref|YP_003620064.1| threonyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy] gi|166223351|sp|A5IAK9|SYT_LEGPC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|148280321|gb|ABQ54409.1| threonyl tRNA synthase [Legionella pneumophila str. Corby] gi|295650265|gb|ADG26112.1| threonyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy] Length = 637 Score = 271 bits (693), Expect = 2e-70, Method: Composition-based stats. Identities = 78/440 (17%), Positives = 142/440 (32%), Gaps = 40/440 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD L L + G+ W P G + +R Sbjct: 230 EYLFRLEEAEKRDHRKLGKALDLF--HFQDIAPGMVFWHPKGWTIYQELEHYMRNRLVDF 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P L LW +SG + ++ EM + + ++ P I+ +KS Sbjct: 288 GYQEIRTPQLVDRSLWEKSGHWANFRDEMF-VTETENRHYAVKPMSCPCHVQIYNHGLKS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + R E G+MR R + DA+ F + M Sbjct: 347 YRDLPLRLSEFGNCHRCEPSGALHGLMRVRNMVQDDAHIFCTEDQIQSE-VAMMLELVQS 405 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G I R P S + A+T ++ P E Sbjct: 406 VYKDFGFTEIKYRLALRPEKRVGSDDVWDKAETALKLAMQGRNIEWVDAPGE-------- 457 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 A Y + L D L + ++ A++ Sbjct: 458 ---------GAFYGPKIEC---SLSDCLGRIWQCGTIQVDFSMPARL--------EASYV 497 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG + +G+ ++ + GK +W V +++ + Sbjct: 498 AEDGSKQTPVMLHRAILGSFERFMGILIEHYAGKLPLWLSPVQAVVLTI------SEKQN 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + EK+ L K G +D E+IG + L P ++VG K V + +V ++ R Sbjct: 552 EYAEKVRKTLQKRGIRANFDLRNEKIGFKIREHTLQKIPYLLVVGDKEVENCQVAVRTRD 611 Query: 423 TGIREDMSLEEVINYASHRF 442 M+++ + + + Sbjct: 612 GIDLGVMTIDTICDTLTQEI 631 >gi|262403446|ref|ZP_06080004.1| threonyl-tRNA synthetase [Vibrio sp. RC586] gi|262349950|gb|EEY99085.1| threonyl-tRNA synthetase [Vibrio sp. RC586] Length = 642 Score = 271 bits (693), Expect = 2e-70, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 147/442 (33%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ IR++ N G Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSVFRDLEIFIRQKLNEYGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHIQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFC-TEDQIQQEVTSCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G ++I ++ + P S E D E + S M+ P + Sbjct: 410 TTFGFQNIVVKLSTRPEKRVGSDEIW---DKSEQALIDSLKAMEIPFEIQ---------- 456 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y + L+D L + ++ G AT+ G Sbjct: 457 ----EGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLDFNLPTRLG--------ATYVGE 501 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + V + +G++ ++ + G W +++ D Sbjct: 502 SNERLIPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVVVNIT------DKQADY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ +L K G D E+IG + L P ++ G + + ++ ++ R Sbjct: 556 AHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTRKGK 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 L++ I + + + Sbjct: 616 DLGKFKLDDFIKHIQAEIVSRK 637 >gi|241663242|ref|YP_002981602.1| threonyl-tRNA synthetase [Ralstonia pickettii 12D] gi|240865269|gb|ACS62930.1| threonyl-tRNA synthetase [Ralstonia pickettii 12D] Length = 635 Score = 271 bits (693), Expect = 2e-70, Method: Composition-based stats. Identities = 79/444 (17%), Positives = 147/444 (33%), Gaps = 41/444 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD +L L I ++S G W P G + +R Sbjct: 229 EAYLHMLEEAEKRDHRKLGRELDLF--HIDEYSPGTVFWHPKGWTLWQEIEQYMRRVYRE 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW ++G +D Y + M + + + P + I++ IK Sbjct: 287 NGYQEVKGPQILDKTLWEKTGHWDKYRENMF-ITESEKREYALKPMNCPGHILIYKQGIK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP F + R+E G+MR R F D + F T + + Sbjct: 346 SYRDLPLRFGEFGACHRNEPSGGLHGIMRVRGFTQDDGHIFC-TEDMIQAEVTAFTTLLQ 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +++ G I + + P + E D + Sbjct: 405 KVYKDFGFTEILYKLSTRPDKRIGTEE-----------------SWDRAEAALAEGLRAS 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + L D+L + ++ + A F Sbjct: 448 GCEFEYLPGEGAFYGPKIEY---VLKDALGRQWQCGTIQVDPNLP--------ERLDAEF 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DG H + +G++ ++ + G W + + + Sbjct: 497 VGEDGARHRPIMLHRAIVGSLERFIGILIEQYAGALPTW------LSPVQVAVLSITDSH 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + + L K G D E+IG + + P Q++VG K +++V ++ R Sbjct: 551 AEYAQSVVQSLQKQGFRAVVDLRNEKIGYKIREHSVQKVPYQIVVGDKERDENQVAVRAR 610 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 M L + + +N Sbjct: 611 GNVDLGSMPLSAFVERLQNDLANK 634 >gi|73919802|sp|Q5ZS05|SYT_LEGPH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS Length = 637 Score = 271 bits (693), Expect = 2e-70, Method: Composition-based stats. Identities = 78/440 (17%), Positives = 142/440 (32%), Gaps = 40/440 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD L L + G+ W P G + +R Sbjct: 230 EYLFRLEEAEKRDHRKLGKALDLF--HFQDIAPGMVFWHPKGWTIYQELEHYMRNRLVDF 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P L LW +SG + ++ EM + + ++ P I+ +KS Sbjct: 288 GYQEIRTPQLVDRSLWEKSGHWANFRDEMF-VTETENRHYAVKPMSCPCHVQIYNHGLKS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + R E G+MR R + DA+ F + M Sbjct: 347 YRDLPLRLSEFGNCHRCEPSGALHGLMRVRNMVQDDAHIFCTEDQIQSE-VAMMLELVQS 405 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G I R P S + A+T ++ P E Sbjct: 406 VYKDFGFTEIKYRLALRPEKRVGSDDVWDKAETALKLAMQGRNIEWVDAPGE-------- 457 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 A Y + L D L + ++ A++ Sbjct: 458 ---------GAFYGPKIEC---SLSDCLGRIWQCGTIQVDFSMPARL--------EASYV 497 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG + +G+ ++ + GK +W V +++ + Sbjct: 498 AEDGSKQTPVMLHRAILGSFERFMGILIEHYAGKLPLWLSPVQAIVLTI------SEKQN 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + EK+ L K G +D E+IG + L P ++VG K V + +V ++ R Sbjct: 552 EYAEKVRKTLQKRGIRANFDLRNEKIGFKIREHTLQKIPYLLVVGDKEVENCQVAVRTRD 611 Query: 423 TGIREDMSLEEVINYASHRF 442 M+++ + + + Sbjct: 612 GIDLGVMTIDTICDTLTQEI 631 >gi|117923678|ref|YP_864295.1| threonyl-tRNA synthetase [Magnetococcus sp. MC-1] gi|259516564|sp|A0L4J6|SYT_MAGSM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|117607434|gb|ABK42889.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Magnetococcus sp. MC-1] Length = 648 Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 149/443 (33%), Gaps = 40/443 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y + + RD L L + + + G+ W P G + + ++ Sbjct: 232 YLTQMEEAEKRDHRRIGKDLDLFS--VQEDAGGGLVFWHPRGSRIRRVIEDFWKDRHVEA 289 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + + LW SG D Y M + +++A P + I++ S Sbjct: 290 GYEFLYTPHIANRQLWNTSGHTDFYSDSMFSPMEVDEQAYQIRPMNCPFHILIYKDRRHS 349 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LPF + ++ +R E+ G+ R R F DA+ F T + + ++ L Sbjct: 350 YRELPFRWGELGTVYRYEMSGALHGLFRVRGFTQDDAHIFC-TEQQIEEEIQRILDLTLD 408 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I G + + P S D + Sbjct: 409 ILRTYGFSDFEINLSTRPEKS-----------------VGSAAIWDKATEALRRAIVSRD 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y DV K+ DS+ + S ++ F ++ + + Sbjct: 452 LSYVVDEGGGAFYGPKIDV---KITDSIGRKWQCSTVQLD----FNLPERFDMG----YI 500 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG+ H + +G++ ++ + G +W V S+ Sbjct: 501 GEDGESHRPIMIHRALMGSLERFFGILVEHYAGWFPMWLAPVQAVVCSIT------DAQH 554 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 E + A L K G V D E++G + L P ++VG K + V ++ R Sbjct: 555 AYAETVLAALKKAGLRVEIDLRNEKVGYKIREHTLKRVPYLLVVGDKEREEGTVNVRLRS 614 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + +++V+ ++ Sbjct: 615 GKSLGSLPIQDVVERLVEEAASR 637 >gi|89094703|ref|ZP_01167639.1| threonyl-tRNA synthetase [Oceanospirillum sp. MED92] gi|89081049|gb|EAR60285.1| threonyl-tRNA synthetase [Oceanospirillum sp. MED92] Length = 639 Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 81/447 (18%), Positives = 151/447 (33%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K +L L+E RD +L L + + + G+ W P G + +R++ Sbjct: 226 KALKAYLHRLEEAEKRDHRKLGKQLDLF--HLQEEAPGMVFWHPKGWALYQGIEQYMRQK 283 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +E+ P + LW +SG ++ + +EM ++ P + ++ Sbjct: 284 LRPRKYVEVKTPQVVERTLWEKSGHWEKFSEEMFT-THSENRDFAVKPMNCPCHVQVYNQ 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 I+SYR+LP + R+E G+MR R F+ D + F ++ Sbjct: 343 GIRSYRDLPLRMAEFGSCHRNEPSGALHGIMRVRGFVQDDGHIFCAEDSIQSE-VSEFID 401 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + I + + P S E D + Sbjct: 402 FLHEVYADFGFQEIQYKLSTRPEKRVGSDE-----------------VWDKSEKALADAL 444 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D+ ++ A Y + L D L + ++ G Sbjct: 445 DNAGLKWDLLPGEGAFYGPKIEF---SLKDCLGRVWQCGTVQVDFSMPGRLG-------- 493 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A F G+ + +G+ ++ ++ G W +AP + ++NI Sbjct: 494 AQFVNEQGERETPVMIHRAILGSFERFIGILIENYAGALPTW---LAPVQAVVMNITDK- 549 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D CEK+ L G D E+IG + L P +++G K V V + Sbjct: 550 --QADYCEKVVQNLENKGFRAESDLRNEKIGFKIRERTLQKVPYLLVIGDKEVEAGAVAV 607 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R M L+E +N + Sbjct: 608 RTRTGEDLGSMPLDEFVNLLGSDVAKK 634 >gi|90407011|ref|ZP_01215201.1| threonyl-tRNA synthetase [Psychromonas sp. CNPT3] gi|90311882|gb|EAS39977.1| threonyl-tRNA synthetase [Psychromonas sp. CNPT3] Length = 635 Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 81/448 (18%), Positives = 142/448 (31%), Gaps = 41/448 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E RD +L L + + G+ W G + IRE+ Sbjct: 226 KQLKAYLKRLEEAAKRDHRKIGKQLDLY--HMQDEAPGMVFWHANGWTIYRELEKYIREQ 283 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E+ P + LW +SG + Y M ++ P + IF Sbjct: 284 TEEYGYQEVKAPQILDRSLWEKSGHWAKYKDNMF-CTCSENRDYAIKPMNCPGHVQIFNQ 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F T + Sbjct: 343 GLKSYRDLPLRMSEFGSCHRNEPSGSLHGLMRVRAFTQDDAHIFC-TEAQILDEVSSCIK 401 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + G ++I ++ + P D + Sbjct: 402 MVFECYKTFGFENIDVKLSTRPEQR-----------------VGDDATWDKAEAALADAL 444 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 S + A Y + L D L + ++ Sbjct: 445 TKNDVEFSWLPGEGAFYGPKIEF---TLHDCLGRAWQCGTIQLDFSMPGRLD-------- 493 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 ATF G D + H + +G++ ++ + G W +++ Sbjct: 494 ATFVGEDNERHTPVMIHRAILGSLERWIGILTEEYAGIFPTWLSPQQVVVMNIT------ 547 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + ++ +L K G V D E+IG + L P ++VG K V ++ I Sbjct: 548 DKQSEYVAEVVTKLKKSGIRVISDLRNEKIGFKIREHTLKRVPYLLVVGDKEVEARELSI 607 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNNR 446 + R +++ I Y R Sbjct: 608 RTRKGDDLGKFKIDDFITYIKEEIVTRR 635 >gi|53805116|ref|YP_113204.1| threonyl-tRNA synthetase [Methylococcus capsulatus str. Bath] gi|73919805|sp|Q60AZ3|SYT_METCA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|53758877|gb|AAU93168.1| threonyl-tRNA synthetase [Methylococcus capsulatus str. Bath] Length = 638 Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 73/438 (16%), Positives = 142/438 (32%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD L L + + + G+ W P G + +R G Sbjct: 231 YLQRLEEAERRDHRKLGKALDLF--HMQEEAPGMVFWHPKGWILWQEIEQYMRRVFRDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW SG ++ + EM ++ P + ++ +KSY Sbjct: 289 YQEIRTPLVVARTLWERSGHWEKFSDEMFT-TASEERDYAIKPMNCPCHVQVYNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+EL G+MR R F DA+ F + ++ ++ Sbjct: 348 RDLPLRLAEFGSCHRNELSGALHGLMRVRGFTQDDAHIFCTEEQIQDE-VSRFIDLLFKV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + ++ + P S E D + T + Sbjct: 407 YADFGFSEVQIKLSTRPEKRVGSDE-----------------VWDKAEHALETALNAKGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ G AT+ Sbjct: 450 AWDLQPGEGAFYGPKIEF---SLKDCLDRVWQCGTIQVDFSMPDRLG--------ATYVA 498 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG H V + +G++ ++ + G+ +W V +++ D Sbjct: 499 EDGARHVPVMLHRAILGSLERFVGILTEHYAGQYPLWLAPVQAVVLNIT------DRQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ G V D E++G + + P +IVG K V V ++ R Sbjct: 553 YAREVAQEFVSKGFRVIADLRNEKVGFKIREHSMQRVPYLLIVGDKEVEAGSVSLRTRDG 612 Query: 424 GIREDMSLEEVINYASHR 441 + +++ + Sbjct: 613 KDHGSFGIGDLVAKFTEE 630 >gi|297569216|ref|YP_003690560.1| threonyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2] gi|296925131|gb|ADH85941.1| threonyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2] Length = 646 Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 89/445 (20%), Positives = 158/445 (35%), Gaps = 40/445 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y + + RD +L L T I Q G+ W P G + R+E R Sbjct: 233 YLERLEEAKKRDHRKLGKELELFT--IQDQIGPGLILWQPKGALLRRLIEDYWRDEHYRH 290 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G +S P + +LW SG D YG+ M + + P + I+++ +S Sbjct: 291 GYELLSTPHIARRELWQTSGHLDFYGENMYSPMEVEEVQYQLKPMNCPFHIAIYKTRKRS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR P + ++ +R E G+MR R F DA+ F P+ + ++ L Sbjct: 351 YREFPLRWCELGTVYRFEKTGALHGLMRVRGFTQDDAHIFCR-PDHLEEEIFRILDLNLH 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I G + + P + S + D + + Sbjct: 410 ILQAFGFADYDIYLSTRP-----------------EKYVGSDENWDRSTAALQAALEKKG 452 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 S+ Y D+ K+ D L + S ++ F ++ + Sbjct: 453 LSYSLDPGEGVFYGPKIDI---KIKDVLGRAWQCSTIQVD----FNLPERF----ELGYT 501 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++H + +G++ V+ + +P +AP + + NI Sbjct: 502 GEDGREHRPIMIHRALMGSLERFFGVLI---EHYAGAFPLWLAPVQARICNIT---DAQL 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D E++YA L + G V D E++ + A L P +IVG K ++ V ++ R Sbjct: 556 DYGEEVYAALRRAGVRVEKDLRNEKLNYKIREAQLQKIPYMLIVGDKEAAEGTVTVRQRD 615 Query: 423 TGIREDMSLEEVINYASHRFSNNRP 447 M + E + + N+ Sbjct: 616 GKNLPPMPVSEFAALVAAEVTVNQE 640 >gi|257455909|ref|ZP_05621126.1| threonyl-tRNA synthetase [Enhydrobacter aerosaccus SK60] gi|257446655|gb|EEV21681.1| threonyl-tRNA synthetase [Enhydrobacter aerosaccus SK60] Length = 642 Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 78/437 (17%), Positives = 148/437 (33%), Gaps = 40/437 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD L L + + + G+ W P G + +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRKIGKALDLF--HMQEEAPGMVFWHPNGWTMWQVLEQYMRKVQKDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG +++Y +M+ + P + +F +KSY Sbjct: 289 YLEIKTPQIVDRSLWEKSGHWENY-GDMMFTTHSEKRDYAIKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + + + L + Sbjct: 348 RDLPLRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCSNEQIKQEA-QDFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + M+ + P + E D D+ Sbjct: 407 YKDFGFDDVQMKLSTRPEKRVGADE-----------------LWDLAEKDLADALDNAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ G A F Sbjct: 450 DWQYLPGEGAFYGPKIEF---SLKDCLGRVWQCGTLQLDFNLPERLG--------AEFVN 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 G+ + +G+ ++ + G +W +++ Sbjct: 499 EQGERERPVMLHRAILGSFERFIGMLIEHYAGWMPVWLAPQQVVVMNIT------DNQAP 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 AC+K+ +L++ G V D E+IG + L P +++G K V ++V ++ R Sbjct: 553 ACQKVAEQLNQAGLRVITDLRNEKIGFKIRERTLERIPYMIVMGDKEVESNQVNVRTREG 612 Query: 424 GIREDMSLEEVINYASH 440 MS++ I+ + Sbjct: 613 DNLGVMSIDAFIDLVNQ 629 >gi|269966330|ref|ZP_06180417.1| threonyl-tRNA synthetase [Vibrio alginolyticus 40B] gi|269829069|gb|EEZ83316.1| threonyl-tRNA synthetase [Vibrio alginolyticus 40B] Length = 485 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 144/442 (32%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ IR + + G Sbjct: 77 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSIFRDLEVFIRAKLDEYGY 134 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 135 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYR 193 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + Sbjct: 194 DLPLRMAEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFC-TESQIQEEVTNCIKMVYDTY 252 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +I ++ + P S E D + + + Sbjct: 253 QTFGFDNIVVKLSTRPEKRVGSDE-----------------IWDQSEEALKQSLESMDIP 295 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y + L+D L + ++ G AT+ G Sbjct: 296 YEIQEGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLDFNLPGRLG--------ATYVGE 344 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + + V + +G++ ++ + G W +++ Sbjct: 345 NNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVLMNIT------DKQSGY 398 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++I +L K G D E+IG + L P ++VG + + ++ ++ R Sbjct: 399 VQEIVQKLQKSGIRAKADLRNEKIGFKIREHTLKRVPYMLVVGDQEMEAGEIAVRTRKGK 458 Query: 425 IREDMSLEEVINYASHRFSNNR 446 +++ I Y S+ + Sbjct: 459 DLGKFKVDDFIAYIQDEISSRK 480 >gi|145589014|ref|YP_001155611.1| threonyl-tRNA synthetase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189083617|sp|A4SX33|SYT_POLSQ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|145047420|gb|ABP34047.1| Ser-tRNA(Thr) hydrolase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 640 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 78/442 (17%), Positives = 140/442 (31%), Gaps = 41/442 (9%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + G+ W P G V +R G Sbjct: 231 YLHMLEESEKRDHRRLGKQLDLF--HFQEEAPGLIFWHPKGWSIWQEVEQYMRRVYQNEG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D+Y + M + ++A P + I+ S + SY Sbjct: 289 YQEVKAPQILDRGLWEKSGHWDNYKENMFT-TESENRAYALKPMNCPGHVQIYNSGLHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP F + R+E G+MR R F D + F + + + Sbjct: 348 RELPLRFGEFGQCHRNEPSGALHGLMRVRGFTQDDGHIFCTEDQIQSE-VAAFDKAVRAV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + ++ P D + Sbjct: 407 YQDFGFTEVAVKLALRPAKR-----------------VGDDAIWDKAEDALRGALKASGQ 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + H L DS+ + ++ G A + Sbjct: 450 EWEELPGEGAFYGPKIEYH---LKDSIGRTWQCGTIQVDFSMPARLG--------AEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G++ ++ + P +AP + ++NI + Sbjct: 499 EDNSRKTPVMLHRAIVGSLERFIGILI---ENHAGNMPVWLAPTQAVVLNISGNSA---A 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +K+ L K G V D E+I + L P ++VG K + V ++ R Sbjct: 553 YAQKVQQSLKKQGFRVESDLRNEKITYKIREHALQKIPFLLVVGDKESESNTVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M L+ + S Sbjct: 613 VDLGVMPLDAFVARLQQDISQK 634 >gi|52842920|ref|YP_096719.1| threonyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52630031|gb|AAU28772.1| threonyl tRNA synthase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 646 Score = 270 bits (691), Expect = 3e-70, Method: Composition-based stats. Identities = 78/440 (17%), Positives = 142/440 (32%), Gaps = 40/440 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD L L + G+ W P G + +R Sbjct: 239 EYLFRLEEAEKRDHRKLGKALDLF--HFQDIAPGMVFWHPKGWTIYQELEHYMRNRLVDF 296 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P L LW +SG + ++ EM + + ++ P I+ +KS Sbjct: 297 GYQEIRTPQLVDRSLWEKSGHWANFRDEMF-VTETENRHYAVKPMSCPCHVQIYNHGLKS 355 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + R E G+MR R + DA+ F + M Sbjct: 356 YRDLPLRLSEFGNCHRCEPSGALHGLMRVRNMVQDDAHIFCTEDQIQSE-VAMMLELVQS 414 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G I R P S + A+T ++ P E Sbjct: 415 VYKDFGFTEIKYRLALRPEKRVGSDDVWDKAETALKLAMQGRNIEWVDAPGE-------- 466 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 A Y + L D L + ++ A++ Sbjct: 467 ---------GAFYGPKIEC---SLSDCLGRIWQCGTIQVDFSMPARL--------EASYV 506 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG + +G+ ++ + GK +W V +++ + Sbjct: 507 AEDGSKQTPVMLHRAILGSFERFMGILIEHYAGKLPLWLSPVQAIVLTI------SEKQN 560 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + EK+ L K G +D E+IG + L P ++VG K V + +V ++ R Sbjct: 561 EYAEKVRKTLQKRGIRANFDLRNEKIGFKIREHTLQKIPYLLVVGDKEVENCQVAVRTRD 620 Query: 423 TGIREDMSLEEVINYASHRF 442 M+++ + + + Sbjct: 621 GIDLGVMTIDTICDTLTQEI 640 >gi|258623264|ref|ZP_05718271.1| threonyl-tRNA synthetase [Vibrio mimicus VM573] gi|262173542|ref|ZP_06041219.1| threonyl-tRNA synthetase [Vibrio mimicus MB-451] gi|258584450|gb|EEW09192.1| threonyl-tRNA synthetase [Vibrio mimicus VM573] gi|261890900|gb|EEY36887.1| threonyl-tRNA synthetase [Vibrio mimicus MB-451] Length = 642 Score = 270 bits (691), Expect = 3e-70, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 147/442 (33%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ IR++ N G Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHIQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFC-TEDQIQQEVTSCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G ++I ++ + P S E D E + S M+ P + Sbjct: 410 TTFGFQNIVVKLSTRPEKRVGSDEIW---DKSEQALIDSLKAMEIPFEIQ---------- 456 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y + L+D L + ++ G AT+ G Sbjct: 457 ----EGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLDFNLPTRLG--------ATYVGE 501 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + V + +G++ ++ + G W +++ D Sbjct: 502 SNERLIPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVVVNIT------DKQADY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ +L K G D E+IG + L P ++ G + + ++ ++ R Sbjct: 556 AHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTRKGK 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 L++ I + + + Sbjct: 616 DLGKFKLDDFIKHIQAEIVSRK 637 >gi|170695920|ref|ZP_02887060.1| threonyl-tRNA synthetase [Burkholderia graminis C4D1M] gi|170139218|gb|EDT07406.1| threonyl-tRNA synthetase [Burkholderia graminis C4D1M] Length = 635 Score = 270 bits (691), Expect = 3e-70, Method: Composition-based stats. Identities = 78/438 (17%), Positives = 146/438 (33%), Gaps = 41/438 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD +L L + S G+ W P G V +R N Sbjct: 229 EAYLHMLEEAEKRDHRKLGKQLDLF--HMQDESPGMVFWHPRGWTLWQQVEQYMRRRVND 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G +E+ P + LW SG + +Y + M + + P + +F ++ Sbjct: 287 AGYLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFNHGLR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + + R+E G+MR R F+ DA+ F + S + Sbjct: 346 SYRDLPLRYAEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNT-LAM 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G + ++ P + E A+ G + + +P E Sbjct: 405 SVYSDFGFDHVEIKLSLRPDARAGTDETWDRAEQGLREALTACGVTWEELPGE------- 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + H + D+L + + +++ G A + Sbjct: 458 ----------GAFYGPKVEYH---IKDALGRSWQCGTLQLDMVLPERLG--------AEY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D + +G+M ++ H G W + +++ + Sbjct: 497 VAEDNSRRRPIMLHRAIVGSMERFLGILIEHHAGAMPAWLAPMQVVVMNIA------ESQ 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + + L K G V D E+I + L P ++VG K V ++ R Sbjct: 551 AEYAQSLAQSLQKQGVRVEADLRNEKISYKIREHTLEKVPYLLVVGDKEREAQTVAVRAR 610 Query: 422 LTGIREDMSLEEVINYAS 439 M + I Sbjct: 611 GGVDLGVMPADTFIERLR 628 >gi|168188008|ref|ZP_02622643.1| threonyl-tRNA synthetase [Clostridium botulinum C str. Eklund] gi|169294168|gb|EDS76301.1| threonyl-tRNA synthetase [Clostridium botulinum C str. Eklund] Length = 637 Score = 270 bits (691), Expect = 3e-70, Method: Composition-based stats. Identities = 83/442 (18%), Positives = 156/442 (35%), Gaps = 42/442 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + G + P G + + RE + G Sbjct: 231 YLHMLEEAKKRDHRKLGRELGLFD--LKEEGPGFPFFYPKGMILRNTLENYWREMHEKAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW +SG +D Y + M + + P + +++S + SY Sbjct: 289 YGEIRTPIILNEKLWHQSGHWDHYKENM-YFTKIDGEDYAIKPMNCPGSILVYKSDLHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP ++ L R E G+MR R F DA+ F + + + Sbjct: 348 RELPIRLGELGLVHRHEYSGALHGLMRVRNFTQDDAHIFMTKEQITSE-ILGVIKMIDNF 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + + P S E + ++ Sbjct: 407 YSLFGFEYF-VELSTRPEDSMGSDE-----------------EWEAATNGLVKALNEAGL 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D H + R + G I + ++ G Sbjct: 449 EYKINEGDGAFYGPKIDFHL----------RDCLGRTWQCGTI-QLDFQMPERFDLSYVG 497 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H G++ ++ + G W +AP ++ ++NI + + Sbjct: 498 PDGEKHRPVMAHRVIFGSIERFIGILTEHYAGAFPTW---LAPVQVKIMNITDN---QVE 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C++I L++ G V D E+IG + A L P +++G K ++++ + ++ R Sbjct: 552 YCKEIQKALNESGIRVELDLRNEKIGYKIREAQLQKIPYMLVLGDKEMNENTIAVRARKQ 611 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G M L++ I Sbjct: 612 GDLGAMKLDDFIAMVRKEIDEK 633 >gi|307611592|emb|CBX01274.1| threonyl tRNA synthetase [Legionella pneumophila 130b] Length = 637 Score = 270 bits (691), Expect = 3e-70, Method: Composition-based stats. Identities = 78/440 (17%), Positives = 142/440 (32%), Gaps = 40/440 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD L L + G+ W P G + +R Sbjct: 230 EYLFRLEEAEKRDHRKLGKALDLF--HFQDIAPGMVFWHPKGWTIYQELEHYMRNRLVDF 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P L LW +SG + ++ EM + + ++ P I+ +KS Sbjct: 288 GYQEIRTPQLVDRSLWEKSGHWANFRDEMF-VTETENRHYAVKPMSCPCHVQIYNHGLKS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + R E G+MR R + DA+ F + M Sbjct: 347 YRDLPLRLSEFGNCHRCEPSGALHGLMRVRNMVQDDAHIFCTEDQIQSE-VAMMLELVQS 405 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G I R P S + A+T ++ P E Sbjct: 406 VYKDFGFTEIKYRLALRPEKRVGSDDVWDKAETALKLAMQGRNIEWVDAPGE-------- 457 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 A Y + L D L + ++ A++ Sbjct: 458 ---------GAFYGPKIEC---SLSDCLGRIWQCGTIQVDFSMPARL--------EASYV 497 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG + +G+ ++ + GK +W V +++ + Sbjct: 498 AEDGSKQTPVMLHRAILGSFERFMGILIEHYAGKLPLWLSPVQAVVLTI------SEKQN 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + EK+ L K G +D E+IG + L P ++VG K V + +V ++ R Sbjct: 552 EYAEKVRKTLQKRGVRANFDLRNEKIGFKIREHTLQKIPYLLVVGDKEVENCQVAVRTRD 611 Query: 423 TGIREDMSLEEVINYASHRF 442 M+++ + + + Sbjct: 612 GIDLGVMTIDTICDTLTQEI 631 >gi|326201674|ref|ZP_08191545.1| threonyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] gi|325988274|gb|EGD49099.1| threonyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] Length = 635 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 157/443 (35%), Gaps = 41/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L I G ++P G + + R E + Sbjct: 230 EYLFRMEEAKKRDHRKLGRELDLFD--ILDEGPGFPFFMPKGMVLRNLLEDFWRSEHKKA 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + + +LW+ SG +D+Y + M + D +++ P + +F+ + S Sbjct: 288 GYQEIKTPVILNKELWLRSGHWDTYKENMYTV-DIDEQEYAIKPMNCPGGILVFKRKLHS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ L R EL G+MR R F DA+ F + + ++ + Sbjct: 347 YRDLPQRMGELGLVHRHELSGALHGLMRVRCFTQDDAHIFMTPEQITDEIV--GVINLID 404 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 F+++ + + P S E + D Sbjct: 405 DFYKVFGFKYNVELSTRPENSIGSDE-----------------MWELSTQGLRKALDLKG 447 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 ++ E A Y D H E DS+ + +++ ++ Sbjct: 448 IKYTVNEGDGAFYGPKIDFHLE---DSIGRTWQCGTIQLDMNLP--------ERFDLSYI 496 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG+ H + G++ A++ + +P ++P ++ ++ + Sbjct: 497 GPDGEKHRPVMIHRVVFGSIERFIAILT---EHFAGAFPAWLSPVQVKILPLVDKHH--- 550 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D ++ L V D E+IG + A + P +++G K + V ++ R Sbjct: 551 DYAFEVKKLLEAENVRVEVDSRNEKIGYKIREAQMDKTPYMLVIGDKELEGRLVSVRSRR 610 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 G +S E+ N Sbjct: 611 DGDLGAISPEQFAEKILDEIKNK 633 >gi|186476316|ref|YP_001857786.1| threonyl-tRNA synthetase [Burkholderia phymatum STM815] gi|238691316|sp|B2JJJ7|SYT_BURP8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|184192775|gb|ACC70740.1| threonyl-tRNA synthetase [Burkholderia phymatum STM815] Length = 635 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 144/441 (32%), Gaps = 41/441 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + S G+ W P G V +R N G Sbjct: 231 YLHMLEEAEKRDHRKLGKQLDLF--HMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNEAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y M + + P + +F ++SY Sbjct: 289 YLEIKTPMIMDRSLWEASGHWQNYRDNMFT-TESEKRDYAIKPMNCPGHVQVFNHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ DA+ F + S + + Sbjct: 348 RDLPLRYAEFGSCHRNESSGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFNT-LAMSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++ ++ P + E A+ G + +P E Sbjct: 407 YKDFGFDNVEIKLSLRPDARAGTDEIWDRAEQGLRDALTACGVTWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + +++ G A F Sbjct: 458 --------GAFYGPKVEYH---IKDALGRSWQCGTLQLDMVLPERLG--------AEFVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G W + +++ + + Sbjct: 499 EDNSRRRPIMLHRAIVGSMERFLGILIEHHAGAMPAWLAPMQVVVMNIA------ESQAE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L K G V D E+I + L P ++VG K V ++ R Sbjct: 553 YAQSLAQSLQKQGVRVEADLRNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSN 444 M ++ Sbjct: 613 IDLGVMPVDAFSERLRQDVQT 633 >gi|291614198|ref|YP_003524355.1| threonyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1] gi|291584310|gb|ADE11968.1| threonyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1] Length = 637 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 78/439 (17%), Positives = 144/439 (32%), Gaps = 40/439 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + + RD +L L + + G+ W P G + +R G Sbjct: 231 YLVRLEEAEKRDHRKLGKQLDLF--HMQDEAPGMVFWHPKGWAMWQVIEQYMRAVYRDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG ++ Y M + P + +F + ++SY Sbjct: 289 YHEIRCPQIIDRVLWEKSGHWEHYKANMFT-TESEKHDYAIKPMNCPGHVQVFNADLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + + R+E G+MR R F+ D + F T E + L++ Sbjct: 348 RELPLRYGEFGSCHRNEPSGGLHGLMRVRGFVQDDGHIFC-TEEQIESEVKAFNTLVLKV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + ++ P G S E D + Sbjct: 407 YKDFGFHDVVVKLALRPEGRVGSDE-----------------IWDKSENALRAALRASGM 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + H + D++ + + ++ G A F Sbjct: 450 DWEELPGEGAFYGPKIEFH---IKDAIGRSWQCGTIQVDFSMPGRLG--------AEFVD 498 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D V + +G++ ++ +H G +W V +++ Q + Sbjct: 499 EDNTRKVPVMLHRAILGSLERFIGILVENHAGALPLWLAPVQMVVMNI------SQAQEE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L G V D E+I + L P Q+I+G K V+ V ++ R Sbjct: 553 YAGKVAQTLRASGFRVQSDLRNEKITYKIREHSLQKLPYQLIIGDKEVAAGLVAVRSRTG 612 Query: 424 GIREDMSLEEVINYASHRF 442 MS++ +I Sbjct: 613 EDLGQMSVDALIQRLQAEL 631 >gi|312881548|ref|ZP_07741334.1| threonyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122] gi|309370825|gb|EFP98291.1| threonyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122] Length = 642 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 75/443 (16%), Positives = 136/443 (30%), Gaps = 42/443 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ +RE+ Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSIFRDLEVFVREKLTEYDY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLIMDRVLWERSGHWDKYADAMFT-TASENRDYALKPMNCPGHVQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFC-TESQIQEEVTSCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +I ++ + P S E D + + + Sbjct: 410 ETFGFSNIAVKLSTRPEKRVGSDE-----------------IWDESEQALKQSLEAMDIP 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y + L D L + ++ G AT+ Sbjct: 453 YEIQEGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFNLPGRLG--------ATYVDE 501 Query: 306 DGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + M I R + +IE + A D Sbjct: 502 NNERQVPVMIHRAILGSLERFIGILIEEYYGFFPTWLSPEQAIIMNIT-------DKQSD 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L K G D E+IG + L P ++ G + + ++ ++ R Sbjct: 555 YVHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTRKG 614 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 +++ ++Y S+ + Sbjct: 615 KDLGKFKVDDFVSYIQDEISSRK 637 >gi|238927112|ref|ZP_04658872.1| threonine--tRNA ligase [Selenomonas flueggei ATCC 43531] gi|238885092|gb|EEQ48730.1| threonine--tRNA ligase [Selenomonas flueggei ATCC 43531] Length = 639 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 85/442 (19%), Positives = 160/442 (36%), Gaps = 42/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + +H+ G + P G + + RE R G Sbjct: 233 YLHMLEEAAKRDHRKLGKELDLFS--LHEEGPGFPFFHPNGMALRNALLDYWREVHRRYG 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+S P + S LW SG + Y + M + +D+ P + ++RS + SY Sbjct: 291 YQEISTPVILSRKLWETSGHWFHYRENMYT-TEIDDEDYAIKPMNCPGCMLVYRSQLHSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R EL G+ R R F DA+ +TP+ + + + Sbjct: 350 RDLPLRLAELGLVHRHELSGALHGLFRVRNFTQDDAH-LFVTPDQIEGEIQHTIDLFDEV 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + GL + P + E + D+ Sbjct: 409 YRTFGLTY-KAELSTRPEDSMGTDE-----------------MWELATNGLQKALDNRGL 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H L DS+ + +++ F T+ G Sbjct: 451 DYVVNEGDGAFYGPKIDFH---LRDSIGRTWQCGTIQLDMSLPEKFD--------LTYVG 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ ++ + +P +AP ++ ++ I + + Sbjct: 500 EDGEKHRPVMLHRVVYGSIERFIGILI---ENYAGAFPVWMAPVQVRILPIT---ERHAE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 EK+Y ++ G V D+ E+ G + + + P ++VG + V ++ Sbjct: 554 YAEKLYKKMFDCGIRVEIDERNEKTGYKIRESQVKKTPYTIVVGDQEQESGTVAMRKYGE 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS ++ I + + Sbjct: 614 KNSTTMSSDDFIALVQEKIATR 635 >gi|82701621|ref|YP_411187.1| threonyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196] gi|123727233|sp|Q2YBS6|SYT_NITMU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|82409686|gb|ABB73795.1| Ser-tRNA(Thr) hydrolase [Nitrosospira multiformis ATCC 25196] Length = 638 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 77/444 (17%), Positives = 152/444 (34%), Gaps = 41/444 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L L+E RD +L L + + + G+ W P G V +R+ Sbjct: 229 NAYLRRLEEAEKRDHRKLGKQLGLF--HLQEEAPGMVFWHPKGWVVWQQVEQYMRDIFRN 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G +E+ P++ LW SG ++++ + M + D+ P + +F+ +K Sbjct: 287 NGYLEIRTPSVLDKGLWERSGHWENFRENMF-VTQAEDREFSVKPMNCPGHVQVFKQGLK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F DA+ F + + Sbjct: 346 SYRDLPLRLAEFGSCHRNEPSGALHGIMRVRAFTQDDAHIFCTESQVQDEAVQF-IDLLQ 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++++ G I ++ + P S E D + + + Sbjct: 405 KVYNDFGFNDILVKLSTRPAKRVGSEE-----------------QWDKAEEALRSALNHK 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + + A Y + L DS+ + ++ G A F Sbjct: 448 NLIWELQPGEGAFYGPKIEF---SLKDSIGRIWQCGTLQLDFSMPERLG--------AEF 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D + +G++ ++ +H G +W +++ + Sbjct: 497 VAEDNSRQIPVMLHRAILGSLERFIGILIENHAGALPLWLSPDHAVVLNI------SEGQ 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ L + G + D E+I + L P Q+IVG K V+ +V ++ R Sbjct: 551 ADYAREVTEELRRAGIRAYADLRNEKITYKIREHSLQKLPYQIIVGDKEVAAQRVAVRTR 610 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 M+L +++ Sbjct: 611 SGSDLGQMTLPALVDRLKEEIRTR 634 >gi|319943475|ref|ZP_08017757.1| threonine--tRNA ligase [Lautropia mirabilis ATCC 51599] gi|319743290|gb|EFV95695.1| threonine--tRNA ligase [Lautropia mirabilis ATCC 51599] Length = 636 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 87/442 (19%), Positives = 150/442 (33%), Gaps = 41/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD L L + G+ W P G + IRE+ + G Sbjct: 231 YLHMLEEAEKRDHRKLGKDLDLF--HTQAEAPGMVFWHPRGWTIWQRIEQYIREKYQKNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + DLW SG +D+Y + M ++ + P + +F + ++SY Sbjct: 289 YQEVRCPQILDVDLWKRSGHWDNYKENMF-FSESEKREYAVKPMNCPGHVQLFNASLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F D + F T E + + + Sbjct: 348 RDLPLRYAEFGSCHRNEPSGALHGIMRVRGFTQDDGHIFC-TEEQVEAEVTAFHQQAMAV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + ++ P + E A+ + D +P E Sbjct: 407 YRDFGFTDVSVKLALRPTQRLGTDEAWDRAENALRAALSACDVAWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H L DS+ +V + + A + Sbjct: 458 --------GAFYGPKIEYH---LKDSIGRAWQVGTIQYDP--------MMPERLDAEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G W V +++ D Sbjct: 499 EDNSRRRPIMLHRAIVGSMERFIGMLIEHHAGAMPTWLAPVQVAVLTVT------DTAAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E I RL K G V D G++IG + L P V+VG K + ++ R Sbjct: 553 YAEDIRQRLIKQGFRVISDLRGDKIGYKIREHSLQKIPYLVVVGEKDRQAGTLAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS E + + + + Sbjct: 613 KDLGSMSFEGFASLLAQQVAEK 634 >gi|302878338|ref|YP_003846902.1| threonyl-tRNA synthetase [Gallionella capsiferriformans ES-2] gi|302581127|gb|ADL55138.1| threonyl-tRNA synthetase [Gallionella capsiferriformans ES-2] Length = 637 Score = 270 bits (690), Expect = 4e-70, Method: Composition-based stats. Identities = 84/443 (18%), Positives = 150/443 (33%), Gaps = 41/443 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L L+E RD +L L + + G+ W P G + +R + Sbjct: 229 ESYLHRLEEAEKRDHRKLGRQLDLF--HMQETMPGMVFWHPKGWTLWQEIEQYMRAKFRE 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P + LW +SG +++Y M ++ P + I+ + Sbjct: 287 HDYQEVRTPAIMDKTLWEKSGHWENYRDNMFT-TASENRDYAVKPMNCPGHVQIYNHGLH 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F DA+ F T + + V Sbjct: 346 SYRDLPLRLAEFGSCHRNESSGSLHGLMRVRGFTQDDAHIFC-TEAQVESEVSNFIVMLN 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G ++ ++ + P S E A+ G P E Sbjct: 405 EVYRDFGFDNVIVKLSTRPEKRVGSDETWDKAEAGLAAALKQNRLDYEVQPGE------- 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + L DSL + ++ F + S A F Sbjct: 458 ----------GAFYGPKVEF---TLKDSLDRMWQCGTIQLD----FNLPVRLS----AEF 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D + +G+M ++ H G +W V +++ Q Sbjct: 497 VDEDNTRKPPVMLHRAILGSMERFIGILIEHHAGAFPMWLSPVQTVLMNI------SQAQ 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + ++I L++ G V D E+I + L P Q+IVG K VS + ++ R Sbjct: 551 EEYAKEIGQILARAGIRVQLDLRNEKITYKIREHSLQKLPYQLIVGDKEVSGRLIAVRTR 610 Query: 422 LTGIREDMSLEEVINYASHRFSN 444 M+++ +I + Sbjct: 611 SGEDLGQMTIDALIERFKAEIKS 633 >gi|188586439|ref|YP_001917984.1| Ser-tRNA(Thr) hydrolase, threonyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF] gi|229558041|sp|B2A5P2|SYT_NATTJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|179351126|gb|ACB85396.1| Ser-tRNA(Thr) hydrolase, threonyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 636 Score = 270 bits (690), Expect = 4e-70, Method: Composition-based stats. Identities = 85/448 (18%), Positives = 165/448 (36%), Gaps = 44/448 (9%) Query: 2 RRSKY--FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 ++S+ ++ L+E R+ +L L + H+ + G + G ++ + R Sbjct: 226 KKSQLEEYIQRLEEAKKREHRKLGKELDLFS--FHEEAPGSPFFHNNGMIVINELIDFWR 283 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 E + G E+S P + + LW SG +D + + M + +D+ P + ++ Sbjct: 284 REHRKAGYQEISTPIILNRGLWERSGHWDHFQENM-YFTEIDDEDFAVKPMNCPGAMLVY 342 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +++ SYR+ P ++ R EL G++R+R F DA+ F L P + + Sbjct: 343 NNNMYSYRDFPLRVAELGKVHRHELSGALHGLLRARSFTQDDAHIFML-PSQVEEELENV 401 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 R + G V T + S + D I + + Sbjct: 402 INLVDRFYSVFGFNYY------------------VELSTKPEKAMGSDEIWDRAINALKS 443 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + + E A Y D +L D++ + + S ++ F ++ Sbjct: 444 VLEKRGIKYIVNEGDGAFYGPKIDF---QLEDAIGRSWQCSTIQLD----FLLPERFD-- 494 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 T+ G DG+ H + GA+ A++ ++GK +W I + Sbjct: 495 --LTYIGEDGQKHRPVMIHRVIYGAIERFFALLIEHYEGKFPLWLAPRQAVIIPIA---- 548 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + I +L G D E+IG + A L P +IVG V + V Sbjct: 549 --DRHMEYGKDITKQLESEGIRADLDQRNEKIGYKIRDAQLKKVPYMLIVGDDEVENKTV 606 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSN 444 ++ R G S+ E+++ + Sbjct: 607 SVRTREDGDIGSKSVAELVDEIKVEIDD 634 >gi|172087694|ref|YP_204597.2| threonyl-tRNA synthetase [Vibrio fischeri ES114] gi|197335357|ref|YP_002156016.1| threonyl-tRNA synthetase [Vibrio fischeri MJ11] gi|171902287|gb|AAW85709.2| threonyl-tRNA synthetase [Vibrio fischeri ES114] gi|197316847|gb|ACH66294.1| threonyl-tRNA synthetase [Vibrio fischeri MJ11] Length = 642 Score = 270 bits (690), Expect = 4e-70, Method: Composition-based stats. Identities = 76/441 (17%), Positives = 143/441 (32%), Gaps = 40/441 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + + RD +L L + Q + G+ W G + +RE+ + Sbjct: 233 LIRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWTIFRELEVFVREKLTQYDY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y + M ++ P + IF +KSYR Sbjct: 291 QEVKGPLMMDRVLWERSGHWDKYAEAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYR 349 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + Sbjct: 350 DLPLRMAEFGSCHRNEPSGALHGIMRVRGFTQDDAHVFC-TEAQVQQEVKSCIEMVYDTY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +I ++ + P S E A++ + + Sbjct: 409 QTFGFDNIVVKLSTRPEQRVGSDEMWDRAES-----------------DLKLALESMEIP 451 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y + L D L + ++ G AT+ G Sbjct: 452 YEIQEGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFALPERLG--------ATYVGE 500 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D + H + +G++ ++ + G W + + D Sbjct: 501 DNERHTPVMIHRAILGSLERFIGILIEDYAGFFPTWLAPEQAIVMGIT------DKQADY 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++I +L K G V D E+IG + L P ++ G + + ++ ++ R Sbjct: 555 VQEIAKKLQKNGFRVKADLRNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTRKGK 614 Query: 425 IREDMSLEEVINYASHRFSNN 445 +++ + + S Sbjct: 615 DLGKFKIDDFVAFLQQEVSAR 635 >gi|225025724|ref|ZP_03714916.1| hypothetical protein EIKCOROL_02627 [Eikenella corrodens ATCC 23834] gi|224941505|gb|EEG22714.1| hypothetical protein EIKCOROL_02627 [Eikenella corrodens ATCC 23834] Length = 635 Score = 270 bits (689), Expect = 4e-70, Method: Composition-based stats. Identities = 80/439 (18%), Positives = 155/439 (35%), Gaps = 39/439 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R E + G Sbjct: 233 YITRIEEAEKRDHRRLGKQLDLF--HLQDEAPGMVFWHPRGWTLWQTIEQHMRRELDAAG 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG + +Y M + P + IF ++SY Sbjct: 291 YREVKTPQILDKTFWEKSGHWANYKDNMFT-TSSEKRDYAVKPMNCPGHVQIFNHGLRSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + ++ + ++I Sbjct: 350 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIAEETRAFN-QLVMKI 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + + ++ P + E A+ G + +P E Sbjct: 409 YKQFGFEHVSIKLSLRPEQRAGTDETWDKAEQGLRDALTACGVQWEELPGE--------- 459 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ G +Y Sbjct: 460 --------GAFYGPKVEYH---IKDALGRSWQCGTIQLDFVLPERLGAEY-------VTE 501 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 +G+ V + +G++ ++ H G +W V +++ + D Sbjct: 502 DNGRARPVMLHRAILGSLERFIGILIEEHAGSFPLWLAPVQMVVMNIT------EKQADY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 C ++ +L G D E+IG + + +P QV+VG K + + +V ++ R Sbjct: 556 CLEVVNKLKAAGLRAEADLRNEKIGYKIRDNSQMRYPYQVVVGDKEMENGQVAVR-RKGE 614 Query: 425 IREDMSLEEVINYASHRFS 443 M +EE I + Sbjct: 615 DLGSMQIEEFIARLQQELA 633 >gi|225873756|ref|YP_002755215.1| threonine--tRNA ligase [Acidobacterium capsulatum ATCC 51196] gi|259516262|sp|C1F9K5|SYT_ACIC5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|225794268|gb|ACO34358.1| threonine--tRNA ligase [Acidobacterium capsulatum ATCC 51196] Length = 681 Score = 270 bits (689), Expect = 4e-70, Method: Composition-based stats. Identities = 87/443 (19%), Positives = 156/443 (35%), Gaps = 38/443 (8%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTG 65 F + + RD + +L L + I + + G+ W P G + +REE R G Sbjct: 269 FARLEEIAKRDHRVLGKQLDLFS--IQEIAGAGLIFWHPKGAMIRKIMEDWMREECIRRG 326 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + LW SG Y + M + +D P + I++S +SY Sbjct: 327 YDLVYTPHVMRVQLWKTSGHEGFYSQNMFTPMELDDAEYRLKPMNCPGHILIYKSQPRSY 386 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + ++ +R E G++R R F DA+ F + + Sbjct: 387 RDLPVRYAELGNVYRYERSGTMHGLLRVRGFTQDDAHIFCTPEQIEDEVVAC-IDFAQSV 445 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPSENTDFDDII 243 G + + D + + + S D + I S + Sbjct: 446 LTTFGFMDFQVELST--------------WDPNDRKNYAGSDDKWNLAISSLESALTRKG 491 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y D+ KL D L ++S + F ++ + Sbjct: 492 IAYKTIAGEAAFYGPKIDI---KLVDVLGRLWQLSTVQFD----FNLPARF----ELEYV 540 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG+ H + G++ V+ + +P +AP +I L+ I + Sbjct: 541 GEDGERHQPVMVHRALYGSVERFFGVLI---EHYAGAFPLWLAPVQIGLVPI---SERHL 594 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 EK+ +L G V D E++ ++ L FP +I+G K V ++ R Sbjct: 595 AYAEKVQQQLEAAGFRVELDRRNEKMNAKIRDFTLQKFPYVLIMGDKEAEAGAVSVRTRG 654 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 G + + L+E I A+ Sbjct: 655 KGDQGSLPLDEFIGRATTLIDTK 677 >gi|332968643|gb|EGK07696.1| threonine--tRNA ligase [Psychrobacter sp. 1501(2011)] Length = 644 Score = 270 bits (689), Expect = 5e-70, Method: Composition-based stats. Identities = 78/442 (17%), Positives = 139/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + S G+ W P G + +R+ Q G Sbjct: 231 YITRMEEAEKRDHRKIGRQLNLF--HMQEQSPGMVFWHPNGWTIYQVLEQYMRKVQKDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG + +Y M + P + +F +KSY Sbjct: 289 YQEIKTPQIVDRSLWEKSGHWGNYATNMFT-TSSESRDYAVKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+E G+MR R F DA+ F T + L + Sbjct: 348 RELPIRLAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TQAQIQEEVANFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I M+ + P + E D + D Sbjct: 407 YKDFGFDQIDMKLSTRPEKRVGTDE-----------------SWDIAEKALAEALDSSGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L DSL + ++ + A F Sbjct: 450 EWEYLPGEGAFYGPKIEF---SLKDSLGRVWQCGTIQVDPNMP--------ERLDAEFVN 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + + +G+ ++ + G +W +++ + Sbjct: 499 ENNERETPIMLHRAILGSFERFLGMLIEHYAGWMPVWLAPQQVVVMNIT------DKQSE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 AC+ + A L G D E+IG + L P +++G K V +V ++ R Sbjct: 553 ACQNVVAELQNAGLRAISDLRNEKIGFKIRERTLERIPYMLVLGDKEVESGQVNVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS+ + I Sbjct: 613 ENLGVMSVADFIELVQKAVDQK 634 >gi|54295556|ref|YP_127971.1| threonyl tRNA synthetase [Legionella pneumophila str. Lens] gi|73919803|sp|Q5WT82|SYT_LEGPL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|53755388|emb|CAH16884.1| Threonyl tRNA synthetase [Legionella pneumophila str. Lens] Length = 637 Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats. Identities = 78/440 (17%), Positives = 142/440 (32%), Gaps = 40/440 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD L L + G+ W P G + +R Sbjct: 230 EYLYRLEEAEKRDHRKLGKALDLF--HFQDIAPGMVFWHPKGWTIYQELEHYMRNRLVDF 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P L LW +SG + ++ EM + + ++ P I+ +KS Sbjct: 288 GYQEIRTPQLVDRSLWEKSGHWANFRDEMF-VTETENRHYAVKPMSCPCHVQIYNHGLKS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + R E G+MR R + DA+ F + M Sbjct: 347 YRDLPLRLSEFGNCHRCEPSGALHGLMRVRNMVQDDAHIFCTEDQIQSE-VAMMLELVQS 405 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G I R P S + A+T ++ P E Sbjct: 406 VYKDFGFTEIKYRLALRPEKRVGSDDVWDKAETALKLAMQGRNIEWVDAPGE-------- 457 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 A Y + L D L + ++ A++ Sbjct: 458 ---------GAFYGPKIEC---SLSDCLGRIWQCGTIQVDFSMPARL--------EASYV 497 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG + +G+ ++ + GK +W V +++ + Sbjct: 498 AEDGSKQTPVMLHRAILGSFERFMGILIEHYAGKLPLWLSPVQAVVLTI------SEKQN 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + EK+ L K G +D E+IG + L P ++VG K V + +V ++ R Sbjct: 552 EYAEKVRKTLQKRGVRANFDLRNEKIGFKIREHTLQKIPYLLVVGDKEVENCQVAVRTRD 611 Query: 423 TGIREDMSLEEVINYASHRF 442 M+++ + + + Sbjct: 612 GIDLGVMTIDTICDTLTQEI 631 >gi|220928797|ref|YP_002505706.1| threonyl-tRNA synthetase [Clostridium cellulolyticum H10] gi|219999125|gb|ACL75726.1| threonyl-tRNA synthetase [Clostridium cellulolyticum H10] Length = 635 Score = 269 bits (687), Expect = 7e-70, Method: Composition-based stats. Identities = 82/443 (18%), Positives = 155/443 (34%), Gaps = 41/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L I G ++P G + + R E + Sbjct: 230 EYLFRIEEAKKRDHRKLGRELDLFD--ILDEGPGFPFFMPKGMVLRNLLEDYWRSEHKKA 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + + +LW+ SG +D+Y M +A +++ P + +F+ + S Sbjct: 288 GYQEIKTPVILNKELWLRSGHWDNYKNNMYTVA-IDEQDCAIKPMNCPGGILVFKRKLHS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ L R EL G+MR R F DA+ F + + + Sbjct: 347 YRDLPQRMGELGLVHRHELSGALHGLMRVRCFTQDDAHIFMTPEQITDE-VTGVINLIDD 405 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + G K + + P S E + D+ Sbjct: 406 FYSVFGFKYN-VELSTRPEKSIGSDE-----------------MWELSTAGLKKALDEKG 447 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 +I + A Y D H E DS+ + +++ ++ Sbjct: 448 IKYTINKGDGAFYGPKIDFHLE---DSIGRTWQCGTIQLDMNLP--------ERFDLSYI 496 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG+ H + G++ A++ G W ++P ++ ++ + Sbjct: 497 GPDGEKHRPVMVHRVVFGSIERFIAILTEHFAGAFPTW---LSPVQVKILPLVDKH---Y 550 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D ++ L V D E+IG + A + P +++G K + V ++ R Sbjct: 551 DYAYEVKKLLEADDIRVEVDTRNEKIGYKIREAQMDKTPYMLVIGDKELEGRLVSVRSRK 610 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 G ++ E+ S+ N Sbjct: 611 DGDLGTITPEQFAEKISNEIKNK 633 >gi|187477891|ref|YP_785915.1| threonyl-tRNA synthetase [Bordetella avium 197N] gi|123738749|sp|Q2L2M5|SYT_BORA1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|115422477|emb|CAJ49002.1| threonyl-tRNA synthetase [Bordetella avium 197N] Length = 650 Score = 269 bits (687), Expect = 8e-70, Method: Composition-based stats. Identities = 77/446 (17%), Positives = 144/446 (32%), Gaps = 41/446 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E R D L L G+ W P G V +R G Sbjct: 236 YLHMLEEAERRDHRKIGRDLDLF--HFQDEGPGLIFWHPKGWTLWQQVEQYMRAVYRDNG 293 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y + M + ++ P + IF + + SY Sbjct: 294 YQEVKAPQILDLSLWKKTGHWDNYRENMFT-TESENRVYGLKPMNCPGHVQIFNAGLHSY 352 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + + R+E G+MR R F D + F + ++ Sbjct: 353 RELPLRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQLQDEC-ADFTALLQKV 411 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + + P S E A+T + P E Sbjct: 412 YRDFGFTEVLYKVATRPEKRIGSDEIWDKAETALMESLRRTGCEFEISPGE--------- 462 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D++ + + ++ G A + Sbjct: 463 --------GAFYGPKIEY---TLKDAIGRHWQCGTIQVDFSMPVRLG--------AEYVD 503 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + V + +G++ ++ +H G W V + + + Sbjct: 504 QNDQRRAPVMLHRAILGSLERFIGMLIENHAGAMPPWLAPVQAVVCCI------SEPSAE 557 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 KI L K G V D GE+I + L P ++VG K + V ++ Sbjct: 558 YAAKITQSLKKQGFRVQADLRGEKITRKIREHSLQKVPYILVVGDKEAQNGTVAVRGLGG 617 Query: 424 GIREDMSLEEVINYASHRFSNNRPVL 449 + ++ + + ++ R V+ Sbjct: 618 LDLGAIPFDDFVARLNEDVASRRNVV 643 >gi|149926877|ref|ZP_01915136.1| threonyl-tRNA synthetase [Limnobacter sp. MED105] gi|149824429|gb|EDM83647.1| threonyl-tRNA synthetase [Limnobacter sp. MED105] Length = 635 Score = 269 bits (687), Expect = 8e-70, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 149/442 (33%), Gaps = 41/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E RD +L L + + G+ W P G V +R+ G Sbjct: 231 YLHRLEEAEKRDHRKLGKQLDLF--HMQDEAPGLVFWHPKGWALWQQVEQYMRKVYVDGG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D+Y + M + + P + ++F+S ++SY Sbjct: 289 YQEIRCPQILDRKLWEKSGHWDNYKENMFT-TESEKRDYALKPMNCPGHIEVFKSDLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F D + F T + + K +++ Sbjct: 348 RDLPMRYGEFGACHRNESSGALHGIMRVRGFTQDDGHIFC-TEDQVQEEVTKFNQVAMQV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P + E D S Sbjct: 407 YADFGFNEINVKLALRPEARLGTDE-----------------TWDKAEDSLRAALKACGV 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + + A Y + H + DS+ + + ++ G A + Sbjct: 450 QWTELPGEGAFYGPKIEYH---MKDSIGRSWQCGTIQVDFQLPGRLG--------AEYVA 498 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D V + +G+M ++ +H G +W V ++ + + Sbjct: 499 EDNSRRVPVMLHRAIVGSMERFIGILIENHAGAMPVWLSPVQVVVATIT------EAHNE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + L K G V D E+I + + P ++G ++V ++ R Sbjct: 553 YAHNVVQMLKKQGIRVEADLRNEKINRKIREHTMQKTPYIAVIGDAERDANQVAVRLRGN 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + +++ I ++ Sbjct: 613 ENLGSLPVDDFIQRLLGEINSR 634 >gi|88800311|ref|ZP_01115877.1| threonyl-tRNA synthetase [Reinekea sp. MED297] gi|88776888|gb|EAR08097.1| threonyl-tRNA synthetase [Reinekea sp. MED297] Length = 643 Score = 269 bits (687), Expect = 8e-70, Method: Composition-based stats. Identities = 79/439 (17%), Positives = 146/439 (33%), Gaps = 40/439 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L + + RD KL L + + + G+ W P G + +R +Q++ G Sbjct: 233 LLFLEEAAKRDHRKIGKKLDLF--HLQEDAPGMVFWHPNGWTMYQVIEQYMRRKQHQHGY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW +SG +D +G +M + P + +F +KSYR Sbjct: 291 QEIKTPMVVDRSLWEKSGHWDKFGDDMFT-THSESRDNAIKPMNCPCHVQVFNQGLKSYR 349 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F+ DA+ F T + ++ Sbjct: 350 DLPLRLAEFGSCHRNEASGALHGIMRVRGFVQDDAHIFC-TEGQIQSEVASFIGMLEEVY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 H G ++ + P S E D + + + Sbjct: 409 HDFGFDDYILKLSTRPEQRVGSDE-----------------DWDRAEEALSEALNATGKE 451 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 +I+ A Y + L DSL + ++ A + Sbjct: 452 WAILPGEGAFYGPKIEF---TLKDSLGRLWQCGTIQVDFSMPGRLD--------AQYVDE 500 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 G+ + +G+ ++ + P +AP + ++NI + Sbjct: 501 HGERQTPVMLHRAIVGSFERFLGILI---EQYAGAMPPWLAPVQAMVLNIT---DAQAET 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + I L G D E+IG + + P ++VG K V + V ++ R Sbjct: 555 AQNIVKNLENQGFRAKADLRNEKIGFKIREHTIQRIPYLLVVGDKEVENGTVAVRTREGQ 614 Query: 425 IREDMSLEEVINYASHRFS 443 M+L E + + Sbjct: 615 DLGVMTLAEFSDRIQSDIA 633 >gi|254498720|ref|ZP_05111436.1| threonyl tRNA synthase [Legionella drancourtii LLAP12] gi|254352048|gb|EET10867.1| threonyl tRNA synthase [Legionella drancourtii LLAP12] Length = 648 Score = 269 bits (687), Expect = 8e-70, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 137/442 (30%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD L L + G+ W P G + +R G Sbjct: 240 YLFRIEEAEKRDHRKLGKTLELF--HFQDIAPGMVFWHPKGWTIYQELERYMRARLADFG 297 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L LW +SG + ++ EM + + +++ P + ++ +KSY Sbjct: 298 YQEIKTPQLVDKVLWEKSGHWANFRDEMF-VTETDNRHYAVKPMNCPCHIQVYNQGLKSY 356 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F + R E G+MR R + DA+ F + + M + Sbjct: 357 RDLPLRFSEFGNCHRCEPSGSLHGLMRVRNMVQDDAHIFCTEDQIQSE-VDMMLQLVQSV 415 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I R P D D + D Sbjct: 416 YTDFGFNEIKYRLALRPEKR-----------------VGGDDVWDKAEAALKQAMKDRTI 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ A++ Sbjct: 459 EWVDAPGEGAFYGPKIEC---SLSDCLGRIWQCGTIQVDFSMPGRLD--------ASYIA 507 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + +G+ ++ + GK +W + + D Sbjct: 508 EDGSKQIPVMLHRAILGSFERFMGILIEHYAGKLPLW------LSPVQAAVLTISEKQND 561 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ L K G +D E+IG + L P +++G K V +V ++ R Sbjct: 562 YAQQVTQILQKRGLRANFDLRNEKIGFKIREHTLQKVPYLLVIGDKEVESGQVAVRSREG 621 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M+++ V + + + Sbjct: 622 TDLGVMTIDTVCDTLTQEIAQK 643 >gi|114332291|ref|YP_748513.1| threonyl-tRNA synthetase [Nitrosomonas eutropha C91] gi|122313048|sp|Q0ADN4|SYT_NITEC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|114309305|gb|ABI60548.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Nitrosomonas eutropha C91] Length = 635 Score = 268 bits (686), Expect = 9e-70, Method: Composition-based stats. Identities = 81/442 (18%), Positives = 149/442 (33%), Gaps = 41/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E RD +L L + + + G+ W P G + +R+ + G Sbjct: 231 YLRRLEEAEKRDHRKLGKQLDLF--HMQEEAPGMVYWHPKGWAIWQQIEQYMRQVLAKNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG ++++ + M + + + P + +F ++SY Sbjct: 289 YVEIRTPQVLDISLWEKSGHWENFRENMF-ITESESRHYAIKPMNCPGHVQVFNHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F T + K ++ Sbjct: 348 RDLPLRLAEFGSCHRNEASGALHGLMRVRSFTQDDAHIFC-TEDQVLEEVTKFIDLLNQV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++ + P + E A+ K+ P E Sbjct: 407 YIDFGFHENLIKLSTRPAQRVGTEEQWDRAEAALAAALNQKELNWELQPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L DSL + ++ G A + Sbjct: 458 --------GAFYGPKIEF---TLKDSLGRKWQCGTLQLDFSMPARLG--------AGYIA 498 Query: 305 ADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D K V + +G+M ++ H G +W +++ + D Sbjct: 499 EDNTKKIPVMLHRAILGSMERFIGILIEHHAGALPVWLSPDQVVVLNI------SRNQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + I L + V D E+I + L P ++VG K V + V ++ R Sbjct: 553 YVQSITNELKQNDIRVSSDLRNEKISYKIREHSLQKVPYLIVVGDKEVENQTVTVRGRSN 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MSLE + + Sbjct: 613 HDHGAMSLEGFVTLIRKEMAER 634 >gi|330816669|ref|YP_004360374.1| Threonyl-tRNA synthetase [Burkholderia gladioli BSR3] gi|327369062|gb|AEA60418.1| Threonyl-tRNA synthetase [Burkholderia gladioli BSR3] Length = 635 Score = 268 bits (686), Expect = 9e-70, Method: Composition-based stats. Identities = 79/445 (17%), Positives = 147/445 (33%), Gaps = 41/445 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD + +L L + + S G+ W P G V +R N Sbjct: 229 EAYLHMLEEAEKRDHRKLAKQLDLF--HMQEESPGMVFWHPKGWTLWQQVEQYMRRRVNE 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G +E+ P + LW SG + +Y + M + + P + +F ++ Sbjct: 287 AGYLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFNHGLR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + + R+E G+MR R F+ DA+ F + S + Sbjct: 346 SYRDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFISESIAFN-ELAM 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G I ++ P + E A+ G + +P E Sbjct: 405 SVYKDFGFDQISIKLSLRPDQRAGTDETWDRAEQGLRDALTACGLEWEELPGE------- 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + H + D+L + + +++ G A + Sbjct: 458 ----------GAFYGPKIEYH---IKDALGRSWQCGTLQLDMVLPERLG--------AEY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D + +G+M ++ H G W V +++ + Sbjct: 497 VAEDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPSWLAPVQVVVMNIA------ENQ 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + L K G V D E+I + L P ++ G K V ++ R Sbjct: 551 AEYVRSLSQSLQKQGLRVEADLRNEKISYKIREHTLEKVPYLLVAGDKEREAQTVAVRAR 610 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 M +E + + Sbjct: 611 GGVDLGVMPVEAFVERLQQDLRAFK 635 >gi|317403269|gb|EFV83787.1| threonyl-tRNA synthetase [Achromobacter xylosoxidans C54] Length = 650 Score = 268 bits (686), Expect = 9e-70, Method: Composition-based stats. Identities = 76/447 (17%), Positives = 142/447 (31%), Gaps = 41/447 (9%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E R D +L L + G+ W P G V +R Sbjct: 234 EAYLHMLEEAERRDHRKIGRELDLF--HFQDEAPGLIFWHPKGWALWQQVEQYMRSVYRD 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW ++G +D+Y + M + ++ P + IF + + Sbjct: 292 NGYQEVKAPQILDISLWKKTGHWDNYRENMFT-TESENRVYGLKPMNCPGHVQIFNAGLH 350 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP + + R+E G+MR R F D + F + Sbjct: 351 SYRELPLRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEEQLQDEC-ADFTALLQ 409 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +++ G + + + P S E D + Sbjct: 410 KVYRDFGFTEVLYKVATRPEKRIGSDE-----------------VWDTAEQALMESLRRT 452 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I A Y + L D++ + + ++ G A + Sbjct: 453 GCEFEISPGEGAFYGPKVEY---TLKDAIGRHWQCGTIQVDFSMPVRLG--------AEY 501 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + + + +G++ ++ +H G W V + + Sbjct: 502 VDQNDQRRPPVMLHRAILGSLERFIGMLIENHAGAMPPWLAPVQAVVCCI------SEPS 555 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D +I L K G V D GE+I + L P ++VG K + V ++ Sbjct: 556 ADYAAEITQSLKKQGFRVESDLRGEKITRKIREHSLQKVPYILVVGDKEKQNGTVAVRGL 615 Query: 422 LTGIREDMSLEEVINYASHRFSNNRPV 448 ++ ++ + S S R V Sbjct: 616 GGLDLGAIAFDDFVARLSEDVSTRRDV 642 >gi|33592589|ref|NP_880233.1| threonyl-tRNA synthetase [Bordetella pertussis Tohama I] gi|33596580|ref|NP_884223.1| threonyl-tRNA synthetase [Bordetella parapertussis 12822] gi|33601133|ref|NP_888693.1| threonyl-tRNA synthetase [Bordetella bronchiseptica RB50] gi|81425212|sp|Q7VY64|SYT_BORPE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|81427196|sp|Q7W912|SYT_BORPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|81431262|sp|Q7WKF7|SYT_BORBR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|33572235|emb|CAE41786.1| threonyl-tRNA synthetase [Bordetella pertussis Tohama I] gi|33573281|emb|CAE37262.1| threonyl-tRNA synthetase [Bordetella parapertussis] gi|33575568|emb|CAE32646.1| threonyl-tRNA synthetase [Bordetella bronchiseptica RB50] gi|332382006|gb|AEE66853.1| threonyl-tRNA synthetase [Bordetella pertussis CS] Length = 649 Score = 268 bits (686), Expect = 1e-69, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 147/445 (33%), Gaps = 41/445 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E R D +L L + G+ W P G V +R+ G Sbjct: 236 YLHMLEEAERRDHRKIGRELDLF--HFQDEAPGLIFWHPKGWALWQQVEQYMRKVYQDNG 293 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y + M + ++ P + IF + + SY Sbjct: 294 YQEVKAPQILDLTLWKKTGHWDNYRENMFT-TESENRVYGLKPMNCPGHVQIFNAGLHSY 352 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + + R+E G+MR R F D + F + ++ Sbjct: 353 RELPLRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQLQDECAAFT-ALLQKV 411 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + + P S E A+T + P E Sbjct: 412 YKDFGFTEVLYKVATRPEKRIGSDEIWDKAETALMESLRRTGCEFEISPGE--------- 462 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D++ + + ++ G A + Sbjct: 463 --------GAFYGPKVEY---TLKDAIGRHWQCGTIQVDFSMPVRLG--------AEYVD 503 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + +G++ ++ +H G W + + + + Sbjct: 504 QNDQRRPPVMLHRAILGSLERFIGMLIENHAGAMPPWLAPLQAVVCCI------SEHSAE 557 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +I L K G V D GE+I + L P ++VG K + + V ++ Sbjct: 558 YAAQITQSLKKQGFRVQADLRGEKITRKIREHSLQKIPYLLVVGDKEMQNGTVAVRGLGG 617 Query: 424 GIREDMSLEEVINYASHRFSNNRPV 448 ++L++ I + S R V Sbjct: 618 LDLGVIALDDFIARLAEDISTRRNV 642 >gi|325265785|ref|ZP_08132472.1| threonine--tRNA ligase [Kingella denitrificans ATCC 33394] gi|324982768|gb|EGC18393.1| threonine--tRNA ligase [Kingella denitrificans ATCC 33394] Length = 637 Score = 268 bits (686), Expect = 1e-69, Method: Composition-based stats. Identities = 79/441 (17%), Positives = 157/441 (35%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R E + G Sbjct: 231 YITRIEEAEKRDHRKLGRQLDLF--HLQDEAPGMVFWHPRGWTLWQVIEQHMRRELDAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG + +Y M L + P + IF + ++SY Sbjct: 289 YREVKTPQIMDKTFWEKSGHWANYKDNMF-LTASEKREYAVKPMNCPGHVQIFNNTLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + ++ + ++I Sbjct: 348 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIAEETRKFNL-LVMKI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + + ++ P S E A+ G + +P E Sbjct: 407 YQQFGFEHVSVKLSLRPEQRAGSDEIWDKAEQGLRDALTACGVEWQELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 458 --------GAFYGPKVEYH---IKDALGRSWQCGTIQLD----FVLPER----LDAEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G++ ++ H G +W V +++ + D Sbjct: 499 EDNSKKRPVMLHRAILGSLERFIGILIEEHAGSFPLWLAPVQMVVMNIT------EKQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ +L G D E+IG + + +P Q++VG K + + +V ++ R Sbjct: 553 YCREVVEKLKAAGFRAEADLRNEKIGYKIRDNSQMRYPYQIVVGDKEMENGQVAVR-RKG 611 Query: 424 GIREDMSLEEVINYASHRFSN 444 M +E+ I ++ Sbjct: 612 EDLGSMKVEDFIALLQKEIAD 632 >gi|313668802|ref|YP_004049086.1| threonyl-tRNA synthetase [Neisseria lactamica ST-640] gi|313006264|emb|CBN87726.1| putative threonyl-tRNA synthetase [Neisseria lactamica 020-06] Length = 637 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 85/443 (19%), Positives = 164/443 (37%), Gaps = 42/443 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K ++ ++E RD +L L + + G+ W P G V +R+E N Sbjct: 229 KAYIRRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQAVEQHMRKELNA 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + W +SG +++Y M + + P + IF + ++ Sbjct: 287 AGYKEVKTPQIMDKTFWEKSGHWENYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F+ DA+ F + + + Sbjct: 346 SYRDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLV 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RI+ + G + ++ P S E A+ G + + +P E Sbjct: 405 RIYKQFGFHDVSVKLSLRPEKRAGSDEVWDKAEQGLREALTACGVEWEELPGE------- 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + H + D+L + + ++ F + ++A + Sbjct: 458 ----------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LNAEY 496 Query: 303 KGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + V + +G++ ++ +H G +W V +++ + Sbjct: 497 VTENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNIT------ENQ 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D C ++ ARL G V D E+IG + FP Q++VG K ++KV ++ R Sbjct: 551 ADYCREVAARLQAAGFRVELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-R 609 Query: 422 LTGIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 610 KAEDLGSLDLDDFIAQLQQEIAD 632 >gi|153803259|ref|ZP_01957845.1| threonyl-tRNA synthetase [Vibrio cholerae MZO-3] gi|124121199|gb|EAY39942.1| threonyl-tRNA synthetase [Vibrio cholerae MZO-3] Length = 516 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 147/442 (33%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ IR + N G Sbjct: 108 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSVFRDLEIFIRHKLNEYGY 165 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 166 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHIQIFNQGLKSYR 224 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + + Sbjct: 225 DLPLRMAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFC-TEDQIQQEVTSCIKMVYDTY 283 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G ++I ++ + P S E D E + S MD P + Sbjct: 284 TTFGFQNIVVKLSTRPEKRVGSDEIW---DKSEQALIDSLKAMDIPFEIQ---------- 330 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y + L+D L + ++ G AT+ G Sbjct: 331 ----EGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLDFNLPTRLG--------ATYVGE 375 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + V + +G++ ++ + G W +++ D Sbjct: 376 SNERLIPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVVVNIT------DKQADY 429 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ +L K G D E+IG + L P ++ G + + ++ ++ R Sbjct: 430 AHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTRKGK 489 Query: 425 IREDMSLEEVINYASHRFSNNR 446 L++ I + ++ + Sbjct: 490 DLGKFKLDDFIAHIQAEIASRK 511 >gi|329118120|ref|ZP_08246832.1| threonine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200] gi|327465780|gb|EGF12053.1| threonine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200] Length = 640 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 161/442 (36%), Gaps = 41/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + + G+ W P G + +R+E + G Sbjct: 237 YIQRIEEAEKRDHRKLGKQLDLF--HLQEEAPGMVFWHPRGWALWQAIEQHMRKELDAAG 294 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W SG +D+Y M + + P + IF + ++SY Sbjct: 295 YREVKTPQIMDKTFWERSGHWDNYKDNMF-VTQSEKREYAVKPMNCPGHVQIFNNSLRSY 353 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + + + +RI Sbjct: 354 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVEEA-RRFNELLVRI 412 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S + A+ G + +P E Sbjct: 413 YKQFGFHDVAVKLSLRPEKRAGSDDIWDKAEQGLRDALTACGVEWEELPGE--------- 463 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D++ + + ++ F + + A + Sbjct: 464 --------GAFYGPKIEYH---VKDAIGRSWQCGTLQLD----FVLPER----LDAEYVT 504 Query: 305 A-DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G+ V + +G++ ++ +H G +W V +++ + D Sbjct: 505 ESNGRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQMVVMNIT------EHQAD 558 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C K+ +L G V D E+IG + FP Q++VG K + +V ++ R Sbjct: 559 YCRKVVEKLRAEGFRVELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKENGQVAVR-RKA 617 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + +++ I + + Sbjct: 618 EDLGSLKVDDFIAQLKREIAES 639 >gi|319637847|ref|ZP_07992613.1| threonyl-tRNA synthetase [Neisseria mucosa C102] gi|317401002|gb|EFV81657.1| threonyl-tRNA synthetase [Neisseria mucosa C102] Length = 637 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 161/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 231 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +++Y M + + P + IF + ++SY Sbjct: 289 YKEVKTPQIMDKTFWEKSGHWENYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 348 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVDEARAFN-ELLVRI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S E A+ G + +P E Sbjct: 407 YKQFGFHDVAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACGVEWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + ++A + Sbjct: 458 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LNAEYVT 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 499 ENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G V D E+IG + FP Q++VG K ++KV ++ R Sbjct: 553 YCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-RKA 611 Query: 424 GIREDMSLEEVINYASHRFSN 444 +++++ I ++ Sbjct: 612 EDLGSLNVDDFIAQLQQEITD 632 >gi|134095006|ref|YP_001100081.1| threonyl-tRNA synthetase [Herminiimonas arsenicoxydans] gi|166223347|sp|A4G619|SYT_HERAR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|133738909|emb|CAL61956.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS) [Herminiimonas arsenicoxydans] Length = 635 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 142/444 (31%), Gaps = 41/444 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD L L + + G+ W P G V +R Sbjct: 229 EAYLTMLEEAEKRDHRKLGRALDLF--HFQEEAPGLIFWHPKGWTVWQQVEQYMRRVYQD 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW +SG +++Y + M + +++ P + IF S ++ Sbjct: 287 NGYQEVKAPQILDRSLWEKSGHWENYKENMFT-TESENRSYALKPMNCPGHVQIFASDLR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP + + R+E G+MR R F D + F + Sbjct: 346 SYRELPLRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQILDECVAFT-ALLQ 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +++ G ++ + + P S E D + D Sbjct: 405 KVYRDFGFTNVIYKVATRPEKRVGSDE-----------------AWDKAEAALIASLDRS 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I A Y + L D++ + ++ G A + Sbjct: 448 GCTYEISPGEGAFYGPKIEY---TLKDAIGRMWQCGTIQVDFSMPARLG--------AEY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D + +G+ ++ +H G +W + + + D Sbjct: 497 VAEDNTKKIPVMLHRAILGSFERFIGMLIENHAGALPLWLA-----PVQIAVLNISDAQA 551 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D + + L K G V D E+I + + P +++G K V ++ R Sbjct: 552 -DYAQAVAQNLKKQGFRVHVDLRNEKITYKIREHSIQKLPYIIVIGDKERDAGTVAVRAR 610 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 M ++ ++ ++ Sbjct: 611 GNVDLGVMPVDLLVERLNNEVEAK 634 >gi|73540970|ref|YP_295490.1| threonyl-tRNA synthetase [Ralstonia eutropha JMP134] gi|123732957|sp|Q472N7|SYT_RALEJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|72118383|gb|AAZ60646.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Ralstonia eutropha JMP134] Length = 635 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 147/444 (33%), Gaps = 41/444 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD L L + + + G+ W P G + V +R Sbjct: 229 EAYLHMLEEAEKRDHRKLGKSLDLF--HLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLTA 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW +SG + +Y + M + + + P + IF ++ Sbjct: 287 AGYDEVRTPQVMDRSLWEKSGHWQNYKENMF-VTESEKRDYAIKPMNCPGHVQIFNHGLR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F+ DA+ F + + Sbjct: 346 SYRDLPLRLAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEEQIVAEA-KAFNELAF 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G K + ++ P S E A+ G + +P E Sbjct: 405 SVYDDFGFKDVAVKLSLRPAQRAGSDEVWDHAEEGLRLALRACGVDWEELPGE------- 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + H + D++ + + +++ G A + Sbjct: 458 ----------GAFYGPKVEYH---IKDAIGRSWQCGTLQLDLVLPERLG--------AEY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D + +G+ ++ +H G W +++ + Sbjct: 497 VAEDNSRKRPVMLHRAILGSFERFLGILLENHAGALPAWLAPEQVVVMNIA------ESQ 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + E + L K G D E+I + L P ++VG K ++V ++ R Sbjct: 551 AEYAENVVQSLLKQGFRAKADLRNEKITYKIREHSLQKIPYLLVVGDKERDANQVAVRAR 610 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 M + + +N Sbjct: 611 GNVDLGVMPVSAFVERLQQDVTNK 634 >gi|291533300|emb|CBL06413.1| threonyl-tRNA synthetase [Megamonas hypermegale ART12/1] Length = 423 Score = 268 bits (684), Expect = 2e-69, Method: Composition-based stats. Identities = 86/442 (19%), Positives = 157/442 (35%), Gaps = 42/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + +H+ G + P G + + RE + G Sbjct: 19 YLKMLEEAAKRDHRKLGKELDLFS--LHEEGPGFPFFHPNGMVIRNELINYWREVHRQFG 76 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW SG +D Y + M + + P + ++ + SY Sbjct: 77 YQEIKTPMIMNRKLWETSGHWDHYKENM-YFTKIDGEDYAIKPMNCPGGMLVYLTQQHSY 135 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R EL G+MR R F DA+ F L P + ++ + ++ Sbjct: 136 RDLPLRLGELGLVHRHELSGALHGLMRVRNFTQDDAHIFML-PNQIEDEIQRVIDLFDKV 194 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + GL + P S E + + + Sbjct: 195 YSTFGLTY-HAELSTRPEDSMGSDE-----------------VWETATNALRNALEHRGL 236 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D H L DS+ + +++ F T+ G Sbjct: 237 KYVINEGDGAFYGPKIDFH---LTDSIGRTWQCGTIQLDMLMPEKFD--------LTYIG 285 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ ++ + +P +AP ++ ++ I D Sbjct: 286 EDGQKHRPVMIHRVVYGSIERFIGILI---ENYAGAFPAWLAPVQVKILPISDK---YVD 339 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +I ++ +G V DD E+IG + A + P +IVG + + + ++ R Sbjct: 340 YAYEIKRKMFDLGIRVEVDDRNEKIGYKIREAQVKKVPYSIIVGESELENKNISVRKRRE 399 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + IN Sbjct: 400 KDTVTMDTDTFINNLLEEIKTK 421 >gi|293604689|ref|ZP_06687089.1| threonine--tRNA ligase [Achromobacter piechaudii ATCC 43553] gi|292816858|gb|EFF75939.1| threonine--tRNA ligase [Achromobacter piechaudii ATCC 43553] Length = 650 Score = 268 bits (684), Expect = 2e-69, Method: Composition-based stats. Identities = 78/447 (17%), Positives = 143/447 (31%), Gaps = 41/447 (9%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E R D +L L + G+ W P G V +R N Sbjct: 234 EAYLHMLEEAERRDHRKIGRELDLF--HFQDEAPGLIFWHPKGWALWQQVEQYMRAIYNN 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW ++G +D+Y + M + ++ P + IF + + Sbjct: 292 NGYQEVKAPQILDISLWKKTGHWDNYRENMFT-TESENRVYGLKPMNCPGHVQIFNAGLH 350 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP + + R+E G+MR R F D + F + Sbjct: 351 SYRELPLRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEEQLQDEC-ADFTALLQ 409 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +++ G + + + P S E D + Sbjct: 410 KVYRDFGFTEVLYKVATRPEKRIGSDE-----------------VWDTAEQALMESLRRT 452 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I A Y + L D++ + + ++ G A + Sbjct: 453 GCEFEISPGEGAFYGPKVEY---TLKDAIGRHWQCGTIQVDFSMPVRLG--------AEY 501 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + + + +G++ ++ +H G W V + + Sbjct: 502 VDQNDQRRPPVMLHRAILGSLERFIGMLIENHAGAMPPWLAPVQAVVCCI------SEPS 555 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D +I L K G V D GE+I + L P ++VG K + V ++ Sbjct: 556 ADYAAEITQSLKKQGFRVESDLRGEKITRKIREHSLQKVPYILVVGDKEKQNGTVAVRGL 615 Query: 422 LTGIREDMSLEEVINYASHRFSNNRPV 448 ++ +E + S S R V Sbjct: 616 GGLDLGAIAYDEFVARLSEDVSARRDV 642 >gi|269214426|ref|ZP_05986526.2| threonine--tRNA ligase [Neisseria lactamica ATCC 23970] gi|269209844|gb|EEZ76299.1| threonine--tRNA ligase [Neisseria lactamica ATCC 23970] Length = 643 Score = 268 bits (684), Expect = 2e-69, Method: Composition-based stats. Identities = 85/443 (19%), Positives = 164/443 (37%), Gaps = 42/443 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K ++ ++E RD +L L + + G+ W P G V +R+E N Sbjct: 235 KAYIRRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQAVEQHMRKELNA 292 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + W +SG +++Y M + + P + IF + ++ Sbjct: 293 AGYKEVKTPQIMDKTFWEKSGHWENYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLR 351 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F+ DA+ F + + + Sbjct: 352 SYRDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLV 410 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RI+ + G + ++ P S E A+ G + + +P E Sbjct: 411 RIYKQFGFHDVSVKLSLRPGKRAGSDEVWDKAEQGLREALTACGVEWEELPGE------- 463 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + H + D+L + + ++ F + ++A + Sbjct: 464 ----------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LNAEY 502 Query: 303 KGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + V + +G++ ++ +H G +W V +++ + Sbjct: 503 VTENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNIT------ENQ 556 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D C ++ ARL G V D E+IG + FP Q++VG K ++KV ++ R Sbjct: 557 ADYCREVAARLQAAGFRVELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-R 615 Query: 422 LTGIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 616 KAEDLGSLDLDDFIAQLQQEIAD 638 >gi|288940715|ref|YP_003442955.1| threonyl-tRNA synthetase [Allochromatium vinosum DSM 180] gi|288896087|gb|ADC61923.1| threonyl-tRNA synthetase [Allochromatium vinosum DSM 180] Length = 639 Score = 268 bits (684), Expect = 2e-69, Method: Composition-based stats. Identities = 77/444 (17%), Positives = 141/444 (31%), Gaps = 41/444 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L L+E RD +L L + G+ W G+ +RE+ + Sbjct: 232 NAYLHRLEEAEKRDHRKLGKQLDLF--HFQDEAPGMAFWHAKGRVVYRLAETYMREKLDE 289 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW SG +D + M +D+ P + ++ +K Sbjct: 290 YGYQEVETPQVLDRSLWERSGHWDKFAGGMFT-THLDDRDFAIKPMNCPGHIQLYNQGLK 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + + R+E G+MR+R F DA+ F + + Sbjct: 349 SYRDLPLRLAEFGVVHRNEPSGTLHGLMRARRFTQDDAHVFCTEDQLQSE-VATLIDMVF 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + G +I + P + E D + DD Sbjct: 408 ETYRDFGFDAIDLALSLRPEQRVGADE-----------------LWDKAEAALAQSLDDK 450 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I A Y + L DS+ + ++ G A + Sbjct: 451 GLTYRIQPGEGAFYGPKIEF---TLHDSIGRAWQCGTIQVDFSMPGRLG--------AHY 499 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D + +G++ ++ + G +W V +++ Sbjct: 500 IAEDNSKQTPVMIHRAVLGSVERFIGILIEHYAGLLPVWLAPVQAVALNIT------DRQ 553 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D +++ L G +D E+IG + L P ++VG + V + ++ R Sbjct: 554 ADYVKEVVKTLRDKGFRAEFDLRNEKIGFKIREHTLQRVPYLLVVGDREVETRSLSVRDR 613 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 SL+ I S +N Sbjct: 614 QGQDLGSFSLDAFIERLSQDVANR 637 >gi|309378779|emb|CBX22605.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 637 Score = 268 bits (684), Expect = 2e-69, Method: Composition-based stats. Identities = 85/443 (19%), Positives = 164/443 (37%), Gaps = 42/443 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K ++ ++E RD +L L + + G+ W P G V +R+E N Sbjct: 229 KAYIRRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQAVEQHMRKELNA 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + W +SG +++Y M + + P + IF + ++ Sbjct: 287 AGYKEVKTPQIMDKTFWEKSGHWENYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F+ DA+ F + + + Sbjct: 346 SYRDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARVFN-ELLV 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RI+ + G + ++ P S E A+ G + + +P E Sbjct: 405 RIYKQFGFHDVSVKLSLRPGKRAGSDEVWDKAEQGLREALTACGVEWEELPGE------- 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + H + D+L + + ++ F + ++A + Sbjct: 458 ----------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LNAEY 496 Query: 303 KGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + V + +G++ ++ +H G +W V +++ + Sbjct: 497 VTENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNIT------ENQ 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D C ++ ARL G V D E+IG + FP Q++VG K ++KV ++ R Sbjct: 551 ADYCREVAARLQAAGFRVELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-R 609 Query: 422 LTGIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 610 KAEDLGSLDLDDFIAQLQQEIAD 632 >gi|121605747|ref|YP_983076.1| threonyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2] gi|166225475|sp|A1VR77|SYT_POLNA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|120594716|gb|ABM38155.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Polaromonas naphthalenivorans CJ2] Length = 635 Score = 268 bits (684), Expect = 2e-69, Method: Composition-based stats. Identities = 83/444 (18%), Positives = 136/444 (30%), Gaps = 42/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD +L L I HS G+ W P G V +R+ Sbjct: 230 QYLTMLEEADKRDHRKLGKELDLF--HIDDHSPGLVFWHPKGWTVWQGVEQYMRKVYQNN 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P L LW ++G +D Y M + + P + IF+ IKS Sbjct: 288 GYQEVKGPQLLDKTLWEKTGHWDKYRDNMFT-TESEKRDFALKPMNCPGHILIFKQGIKS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + + R+E G+MR R F D + F + K + + Sbjct: 347 YRDLPLRYGEFGQCHRNEPTGGLHGIMRVRGFTQDDGHIFCTEEQILKECVDYTT-LLQK 405 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G K+I + + P S E D + Sbjct: 406 VYTDFGFKNIIYKVATRPEARIGSDE-----------------SWDKAEHALIESLRASG 448 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I A Y + L D++ + ++ + A + Sbjct: 449 CEFEISPGEGAFYGPKIEY---TLKDAIGRQWQCGTIQVDFSMP--------ERLDAEYV 497 Query: 304 GADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DG H M I R + +IE Sbjct: 498 GEDGARHRPVMLHRAIVGSLERFIGILIEEHAGALPTWLAPEQVSVLTIT-------DSQ 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + L G V D E+I + L P ++VG K ++ V ++ R Sbjct: 551 AEYARGVAKTLQNQGLRVNLDLRNEKITYKIREHSLQKLPFILVVGDKEMAAGAVSVRAR 610 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 MSLE + + Sbjct: 611 GNKDLGVMSLEAFAERIASDIAQK 634 >gi|120554978|ref|YP_959329.1| threonyl-tRNA synthetase [Marinobacter aquaeolei VT8] gi|166223352|sp|A1U2C3|SYT_MARAV RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|120324827|gb|ABM19142.1| Ser-tRNA(Thr) hydrolase [Marinobacter aquaeolei VT8] Length = 641 Score = 268 bits (684), Expect = 2e-69, Method: Composition-based stats. Identities = 87/441 (19%), Positives = 156/441 (35%), Gaps = 39/441 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L L+E RD KL L + + + G+ W P G V +R +Q++ Sbjct: 229 KAYLHRLEEAEKRDHRKIGKKLGLF--HMQEEAPGMVFWHPDGWSLYQEVEQYMRAQQHK 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + S LW +SG +D + +M + P + +F +K Sbjct: 287 HGYKEIKTPQVVSRTLWEKSGHWDKFKDDMFT-TESEKHDYAIKPMNCPCHVQVFNQGLK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP + R+E G+MR R F DA+ F + + Sbjct: 346 SYKDLPLRLAEFGSCHRNEASGALHGLMRVRGFTQDDAHIFCEEDAIQEE-VSAFIAMLH 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 I+ G I + + P S E ++ Q + +P E Sbjct: 405 EIYADFGFSEILYKLSTRPEKRVGSDEVWDKSEAALEQALNREGVDWELLPGE------- 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + L D L + ++ G +Y Sbjct: 458 ----------GAFYGPKIEF---SLKDCLGRVWQCGTIQVDFSMPGRLGAQY-------V 497 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + V + +G+ ++ ++G W +AP +++++NI R Sbjct: 498 ADNSERKTPVMLHRAVLGSFERFIGILIEEYEGAFPTW---LAPTQVAVLNITDK---QR 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D C+ + +L G V D E+IG + L P V+VG K + ++ V ++ R Sbjct: 552 DYCQNLAKKLDSSGYRVNADLRNEKIGFKIREHTLNKVPYLVVVGDKEIENNAVAVRTRK 611 Query: 423 TGIREDMSLEEVINYASHRFS 443 MS+++ + Sbjct: 612 GEDLGTMSVDDFEKLLAADVE 632 >gi|192360042|ref|YP_001982990.1| threonyl-tRNA synthetase [Cellvibrio japonicus Ueda107] gi|238692463|sp|B3PL16|SYT_CELJU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|190686207|gb|ACE83885.1| threonyl-tRNA synthetase [Cellvibrio japonicus Ueda107] Length = 642 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 72/446 (16%), Positives = 150/446 (33%), Gaps = 39/446 (8%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L +L+E RD + K L + + G+ W P G + +R + Sbjct: 227 KQLKAYLNLLEEAAKRDHRKLAKKFDLF--HLQDEAPGMVFWHPKGWTLWQQIEQYMRAK 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QN G E+ P + LW +SG +++Y + M + + P + IF Sbjct: 285 QNDWGYQEVRTPLIMDRVLWEKSGHWENYRENMFT-TESEKRDFAVKPMNCPGHVQIFNH 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 ++S+++LP + R+E G+MR R F+ DA+ F + Sbjct: 344 GLRSHKDLPLRLAEFGSCHRNEASGALHGIMRVRGFVQDDAHIFCTEDQVVAE-VAAFNQ 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G I ++ P S E + T Sbjct: 403 MLKSVYDDFGFTDIAVKLSLRPEKYAGSLE-----------------TWNKAEEGLRTAL 445 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + A Y + ++ D+L + + ++ +Y Sbjct: 446 RAAGLEWEELPGEGAFYGPKIEY---QIKDALGRSWQCGTIQLDYVLPERLDAEY----- 497 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + + V + +G+ ++ ++G +W V ++ Sbjct: 498 --VADDNVRKRPVMLHRAILGSFERFLGILIEHYEGSFPVWLSPVQVVVANIT------D 549 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + +++ L + G V D E+IG + + P ++VG K V + + ++ Sbjct: 550 SQAEYVKRVEKALREQGIRVIADLRNEKIGFKIREHTIQRVPYLLVVGDKEVENQSLAVR 609 Query: 420 HRLTGIREDMSLEEVINYASHRFSNN 445 R M L+ I + + + Sbjct: 610 TRDGKDLGVMPLDAFIAHLTADIARR 635 >gi|304436955|ref|ZP_07396918.1| threonine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369906|gb|EFM23568.1| threonine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 639 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 81/442 (18%), Positives = 158/442 (35%), Gaps = 42/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + +H+ G + P G + + RE R G Sbjct: 233 YLHMLEEAAKRDHRKLGRELDLFS--LHEEGPGFPFFHPNGMALRNALLDYWREVHRRYG 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+S P + S LW SG + Y + M + +++ P + ++RS + SY Sbjct: 291 YQEISTPVILSRKLWETSGHWFHYRENMYT-TEIDEEDYAIKPMNCPGCMLVYRSQLHSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R EL G+ R R F DA+ +TP+ + + + Sbjct: 350 RDLPLRLAELGLVHRHELSGALHGLFRVRNFTQDDAH-LFVTPDQIEGEIQHTIDLFDEV 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + GL + P + E + D+ Sbjct: 409 YRTFGLTY-KAELSTRPEDSMGTDE-----------------MWEMATNGLQKALDNRGL 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H L DS+ + +++ F T+ G Sbjct: 451 DYVVNEGDGAFYGPKIDFH---LRDSIGRTWQCGTIQLDMSLPEKFD--------LTYVG 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ ++ + +P +AP ++ ++ I + Sbjct: 500 EDGEKHRPVMLHRVVYGSIERFIGILI---ENYAGAFPVWMAPVQVRILPIT---ERHAA 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E++Y ++ +G V D E+ G + + + P ++VG + + V + Sbjct: 554 YAEELYKKMFDLGLRVEVDARNEKTGYKIRESQVKKTPYTLVVGDQEMESGTVAFRKYGE 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + + I + + Sbjct: 614 KDSTVLPVADFIALVQEKIATR 635 >gi|226941673|ref|YP_002796747.1| threonyl-tRNA synthetase [Laribacter hongkongensis HLHK9] gi|254783525|sp|C1DDA6|SYT_LARHH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226716600|gb|ACO75738.1| Syt [Laribacter hongkongensis HLHK9] Length = 633 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 79/440 (17%), Positives = 144/440 (32%), Gaps = 39/440 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD +L L I + G+ W P G V +R Sbjct: 229 EAYLHMLEEAEKRDHRKLGRQLDLF--HIQDEAPGMVFWHPKGWTLWQQVEQYMRRVLIA 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P + LW +SG + Y ++++ + + P + IF +K Sbjct: 287 NDYQEVRTPQIVDRSLWEKSGHWAMY-QDLMFTTESEKRDYAVKPMNCPCHIQIFNQGLK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F+ DA+ F T + Sbjct: 346 SYRDLPLRMAEFGSCHRNEPSGSLHGIMRVRNFVQDDAHIFC-TEAQMQPETAAFIDLLQ 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G +I ++ + P + E D + Sbjct: 405 AVYQDFGFDNILIKLSTRPEKRVGADE-----------------LWDQAEAALAAALAAK 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + L D L + ++ G +Y +A Sbjct: 448 GLAYELQPGEGAFYGPKIEF---SLKDCLGRVWQCGTLQLDFNLPVRLGAEYVSEDNAK- 503 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 H V + +G++ ++ H G +W V +++ + Sbjct: 504 ------KHPVMLHRAILGSLERFIGILIEHHAGAMPLWLAPVQMAVLNIT------EAQA 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + ++ L K G V D E+I + L P Q+IVG K + + V ++ R Sbjct: 552 EYATEVAETLKKQGFRVDLDLRNEKISYKIREHSLQKLPYQIIVGDKEKAGALVAVRART 611 Query: 423 TGIREDMSLEEVINYASHRF 442 + L + I Sbjct: 612 GEDLGQIPLSQFIERLKSEL 631 >gi|226324523|ref|ZP_03800041.1| hypothetical protein COPCOM_02307 [Coprococcus comes ATCC 27758] gi|225206971|gb|EEG89325.1| hypothetical protein COPCOM_02307 [Coprococcus comes ATCC 27758] Length = 643 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 91/443 (20%), Positives = 158/443 (35%), Gaps = 41/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L M+ + G +LP G + + + RE + Sbjct: 229 EYLHMMEEAKKRDHRKLGKELGLF--MMREEGPGFPFFLPKGMELKNQLLDYWREIHKKA 286 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G +E+S P + S LW SG +D Y M +D+ P + ++ S +S Sbjct: 287 GYVEISTPIMLSRHLWETSGHWDHYKDNMYT-TVIDDEDFAIKPMNCPGGILVYESEPRS 345 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ L R E + G+MR R F DA+ F + + Sbjct: 346 YRDLPLRMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPEQVRDE-IKGVVKLINE 404 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G K + + P S E D + DD+ Sbjct: 405 VYSLFGFKYH-VELSTRPEDSMGSDE-----------------DWDMATEALRGALDDLG 446 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H E DS+ + ++ F ++ + + Sbjct: 447 LPYVVNEGDGAFYGPKIDFHLE---DSIGRTWQCGTIQLD----FQLPLRF----NLEYT 495 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 GADG+ H + G++ ++ G W +AP ++ ++ I Sbjct: 496 GADGEKHRPIMIHRVIFGSIERFIGILIEHFAGAFPTW---LAPVQVKVLPISDK---YM 549 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D +K+ L+ G D E+IG + A + P ++VG+K D V I+ R Sbjct: 550 DYAQKVLDELNNSGVRAEIDTRAEKIGYKIREAQMKKIPYMLVVGAKEEEDGLVSIRSRF 609 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 G SL + + Sbjct: 610 EGDEGQKSLTDFLAAIKMEIQAK 632 >gi|118444060|ref|YP_877833.1| threonyl-tRNA synthetase [Clostridium novyi NT] gi|166223336|sp|A0PZN1|SYT_CLONN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|118134516|gb|ABK61560.1| threonyl-tRNA synthetase [Clostridium novyi NT] Length = 637 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 83/442 (18%), Positives = 156/442 (35%), Gaps = 42/442 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + G + P G + + RE + G Sbjct: 231 YLHMLEEAKKRDHRKLGKELGLFD--LKEEGPGFPFFYPKGMILRNTLENYWREMHEKAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW +SG +D Y + M + + P + +++S + SY Sbjct: 289 YGEIRTPIILNEKLWHQSGHWDHYKENM-YFTKIDGEDYAIKPMNCPGSILVYKSDLHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP ++ L R E G+MR R F DA+ F + + + Sbjct: 348 RELPIRLGELGLVHRHEYSGALHGLMRVRNFTQDDAHIFMTKEQITSE-ILGVIKMIDNF 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + + P S E + ++ Sbjct: 407 YSLFGFEYF-VELSTRPEDSMGSDE-----------------DWEAATNGLIKALNEAGL 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D H + R + G I + ++ G Sbjct: 449 EYKINEGDGAFYGPKIDFHL----------RDCLGRTWQCGTI-QLDFQMPERFDLSYVG 497 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H G++ ++ + G W +AP ++ ++NI + + Sbjct: 498 ADGEKHRPVMAHRVIFGSIERFIGILTEHYAGAFPTW---LAPVQVKIMNITDN---QVE 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C++I L++ G V D E+IG + A L P +++G K +++ + ++ R Sbjct: 552 YCKEIQKVLNENGIRVELDLRNEKIGYKIREAQLQKIPYMLVLGDKEMNEKTIAVRARKQ 611 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G M+L + + Sbjct: 612 GDLGAMNLTDFVAMVKKEIEEK 633 >gi|167749880|ref|ZP_02422007.1| hypothetical protein EUBSIR_00848 [Eubacterium siraeum DSM 15702] gi|167657192|gb|EDS01322.1| hypothetical protein EUBSIR_00848 [Eubacterium siraeum DSM 15702] Length = 639 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 98/449 (21%), Positives = 162/449 (36%), Gaps = 44/449 (9%) Query: 2 RRSKY--FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 + S+ +L +++E RD +L L T M G +LP G + + R Sbjct: 225 KASELEAYLNMIEEAKKRDHRKLGKELELFTIM--DEGPGFPFFLPKGMTLKNTLIDYWR 282 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 + R G +E+S P + + LW SG +D Y + M +D P + ++ Sbjct: 283 QIHTRDGYVEISTPIMLNRQLWETSGHWDHYKENMYT-TVIDDTEFAIKPMNCPGGILVY 341 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +S +SYR+LP ++ L R E G+MR R F DA+ F + + K Sbjct: 342 KSKPRSYRDLPIRMGELGLVHRHEKSGALHGLMRVRCFTQDDAHIFMTPDQITDE--IKG 399 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 V + ++L + + P S E D Sbjct: 400 VVRLIDEVYKLFGFKYHVELSTQPEDSMGSQE-----------------DWDMATEGLRK 442 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D + + E A Y D H E DSL + ++ F ++ Sbjct: 443 ALDSLGLPYVVNEGDGAFYGPKIDFHLE---DSLGRTWQCGTIQLD----FQLPMRF--- 492 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + GADG+ H + G++ ++ G IW +AP ++ L+ I Sbjct: 493 -ELEYTGADGEKHRPIMIHRVVFGSIERFIGILTEHFAGAFPIW---LAPVQVELMPIAD 548 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + K+ A L K G V D E+IG + A L P +++G K V V Sbjct: 549 RH---NEFTSKVAAELKKRGIRVEVDGRSEKIGFKIREAQLQKIPYMLVIGDKEVETENV 605 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 I+ R G MS+ + + Sbjct: 606 SIRCRKRGDIGTMSVSDFCDMVEKEIREK 634 >gi|291531005|emb|CBK96590.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Eubacterium siraeum 70/3] Length = 639 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 97/449 (21%), Positives = 161/449 (35%), Gaps = 44/449 (9%) Query: 2 RRSKY--FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 + S+ +L +++E RD +L L T M G +LP G + + R Sbjct: 225 KASELEAYLNMIEEAKKRDHRKLGKELELFTIM--DEGPGFPFFLPKGMTLKNTLIDYWR 282 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 + R G +E+S P + + LW SG +D Y + M + P + ++ Sbjct: 283 QIHTRDGYVEISTPIMLNRQLWETSGHWDHYKENMYT-TVIDGTEFAIKPMNCPGGILVY 341 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +S +SYR+LP ++ L R E G+MR R F DA+ F + + K Sbjct: 342 KSKPRSYRDLPIRMGELGLVHRHEKSGALHGLMRVRCFTQDDAHIFMTPDQITDE--IKG 399 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 V + ++L + + P S E D Sbjct: 400 VVRLIDEVYKLFGFKYHVELSTQPEDSMGSQE-----------------DWDMATEGLRK 442 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D + + E A Y D H E DSL + ++ F ++ Sbjct: 443 ALDSLGLPYVVNEGDGAFYGPKIDFHLE---DSLGRTWQCGTIQLD----FQLPMRF--- 492 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + GADG+ H + G++ ++ G IW +AP ++ L+ I Sbjct: 493 -ELEYTGADGEKHRPIMIHRVVFGSIERFIGILTEHFAGAFPIW---LAPVQVELMPIAD 548 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + K+ A L K G V D E+IG + A L P +++G K V V Sbjct: 549 RH---NEFTSKVAAELKKRGIRVEVDGRSEKIGFKIREAQLQKIPYMLVIGDKEVETENV 605 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 I+ R G MS+ + + Sbjct: 606 SIRCRKRGDIGTMSVSDFCDMVEKEIREK 634 >gi|269213639|ref|ZP_05982445.2| threonine--tRNA ligase [Neisseria cinerea ATCC 14685] gi|269145722|gb|EEZ72140.1| threonine--tRNA ligase [Neisseria cinerea ATCC 14685] Length = 643 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 160/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 237 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAG 294 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +++Y M + + P + IF + ++SY Sbjct: 295 YKEVKTPQIMDKTFWEKSGHWENYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 353 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 354 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVDEARAFN-ELLVRI 412 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S E A+ G + +P E Sbjct: 413 YKQFGFHDVAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACGVEWEELPGE--------- 463 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + ++A + Sbjct: 464 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LNAEYVT 504 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 V + +G++ ++ +H G +W V +++ + D Sbjct: 505 EKNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 558 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G V D E+IG + FP Q++VG K ++KV ++ R Sbjct: 559 YCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-RKA 617 Query: 424 GIREDMSLEEVINYASHRFSN 444 +++++ I ++ Sbjct: 618 EDLGSLNVDDFIAQLQQEITD 638 >gi|224826514|ref|ZP_03699615.1| threonyl-tRNA synthetase [Lutiella nitroferrum 2002] gi|224601115|gb|EEG07297.1| threonyl-tRNA synthetase [Lutiella nitroferrum 2002] Length = 632 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 155/442 (35%), Gaps = 41/442 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD +L L + + G+ W P G + +V +R Sbjct: 228 LAQYLYMLEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWQLWQSVEQYMRATLA 285 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P + LW +SG +++Y + M + + P + +F + Sbjct: 286 EAGYQEIRTPMVMDRILWEKSGHWENYRENMFT-TESEKRDYAVKPMNCPGHVQVFNQGL 344 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP + + R+E G+MR R F+ DA+ F + + Sbjct: 345 RSYRDLPLRYAEFGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEEQIIDEA-KAFNELT 403 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +R++ + G ++ ++ P + E A+ G + + +P E Sbjct: 404 MRVYRQFGFDNVSVKLSLRPEKYSGTLEAWDRAENGLREALRACGIEWEELPGE------ 457 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 A Y + H + D+L + + ++ G A Sbjct: 458 -----------GAFYGPKIEYH---IKDALGRSWQCGTLQLDYVLPERLG--------AE 495 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ ++ +H G +W V +++ + Sbjct: 496 YVAEDNSRKRPVMLHRAILGSLERFLGILIENHAGAFPLWLAPVQMVVMNIT------EA 549 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D + L K G V D E+I + L P Q+IVG K +D + ++ Sbjct: 550 QADYAASVVQTLKKQGFRVELDLRNEKISYKIREHSLQKLPYQIIVGDKEKADGLIAVRA 609 Query: 421 RLTGIREDMSLEEVINYASHRF 442 R ++L++ + Sbjct: 610 RGE-DLGQLTLDDFVARLKAEM 630 >gi|167629857|ref|YP_001680356.1| threonyl-tRNA synthetase [Heliobacterium modesticaldum Ice1] gi|167592597|gb|ABZ84345.1| threonyl-tRNA synthetase [Heliobacterium modesticaldum Ice1] Length = 641 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 89/442 (20%), Positives = 153/442 (34%), Gaps = 42/442 (9%) Query: 8 LPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L ++E R D +L L T I + G + P G + + REE R G Sbjct: 235 LRRIEEAKRRDHRRIGQELELYT--ILEEGPGFPFFFPKGMIIRNELENFWREEHARAGY 292 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + + LW SG + +Y + M + +++ P + +++ I SYR Sbjct: 293 REVRTPIILNRSLWERSGHWANYRENM-YVTQIDEEDYCVKPMNCPGGMLVYKQAIHSYR 351 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ L R E+ G+MR R F DA+ F +TP K + R++ Sbjct: 352 DLPLRMGELGLVHRHEISGALHGLMRVRCFTQDDAHIF-MTPGQIKDEIIGVIELIDRMY 410 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G V T + S + + S Sbjct: 411 KTFGFAY------------------HVELSTKPEKAMGSDEIWELATNSLEEALKAKGMD 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I A Y D H K R + G I + T+ G Sbjct: 453 YKINPGDGAFYGPKIDFHL----------KDCIGRTWQCGTI-QLDFQMPERFDLTYVGE 501 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H + G++ ++ + G W +AP + ++ I + Sbjct: 502 DGQKHRPVMIHRVVFGSIERFIGILTEHYAGAFPTW---LAPVQARVLPITDRHH---EY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + L+K G V D E+IG + + P ++VG K + V ++ R G Sbjct: 556 AASVRSALAKQGVRVEVDGRNEKIGYKIREGQVQKIPYLLVVGDKEAENGAVAVRKRGEG 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 + M+L+ + R Sbjct: 616 DKGAMALDAFAAMILEEIAQKR 637 >gi|294670480|ref|ZP_06735360.1| hypothetical protein NEIELOOT_02198 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307759|gb|EFE49002.1| hypothetical protein NEIELOOT_02198 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 637 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 160/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 231 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 289 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 348 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S++ A+ G + + +P E Sbjct: 407 YKQFGFHDVSVKLSLRPEKRAGSNDVWDKAEQGLREALTACGVEWDELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 458 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LDAEYVT 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W +++ + D Sbjct: 499 ENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPAQMVIMNIT------ENQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G V D E+IG + FP Q++VG K ++KV ++ R Sbjct: 553 YCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-RKA 611 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 612 EDLGSLDLDDFIAQLQQEIAD 632 >gi|255654593|ref|ZP_05400002.1| threonyl-tRNA synthetase [Clostridium difficile QCD-23m63] Length = 639 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 88/435 (20%), Positives = 156/435 (35%), Gaps = 41/435 (9%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L MI + G +LP G + + + RE + G IE+ P Sbjct: 238 AKKRDHRKLGKELGLF--MIPEEGPGFPMFLPKGMELKNELLKFWREIHRKAGYIEIESP 295 Query: 73 TLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + + LW SG + Y + M + +D+ P + + S + SYR+ P Sbjct: 296 IILNRKLWETSGHWYHYKENMYTVK-IDDEDYAIKPMNCPGGLIYYNSQLHSYRDFPMRV 354 Query: 133 YQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 ++ R EL G+MR R F D++ F L + K + + ++ Sbjct: 355 AELGRVHRHELSGALQGLMRVRAFTQDDSHIFMLPEQIKDE--IKGVANLIDGIYKTFGF 412 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ 251 + + P S+E + +++ +I E Sbjct: 413 EYNLELSTRPENSMGSNE-----------------EWEAAENGLREALEELGLPYTINEG 455 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A Y D H L D L + +++ F T+ G DG+ H Sbjct: 456 DGAFYGPKIDFH---LKDCLGRTWQCGTIQLDMQLPRQFDN--------TYIGQDGEKHR 504 Query: 312 V-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + G++ ++ + +P ++P ++ ++ I D ++ Sbjct: 505 PVMIHRVAFGSIERFIGILI---EHYAGKFPVWLSPTQVKILPISDK---FMDYANEVKK 558 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L G V DD E+IG + A L P +IVG K V+D+ V ++ R G + Sbjct: 559 ELFDKGIRVELDDRAEKIGFKIREAQLEKVPYMLIVGEKEVADNNVSVRSRDKGEIGSIK 618 Query: 431 LEEVINYASHRFSNN 445 L+E I S + Sbjct: 619 LDEFIASISKEIESR 633 >gi|255305562|ref|ZP_05349734.1| threonyl-tRNA synthetase [Clostridium difficile ATCC 43255] Length = 639 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 88/435 (20%), Positives = 155/435 (35%), Gaps = 41/435 (9%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L MI + G +LP G + + + RE + G IE+ P Sbjct: 238 AKKRDHRKLGKELGLF--MIPEEGPGFPMFLPKGMELKNELLKFWREIHRKAGYIEIESP 295 Query: 73 TLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + + LW SG + Y + M + +D+ P + + S + SYR+ P Sbjct: 296 IILNRKLWETSGHWYHYKENMYTVK-IDDEDYAIKPMNCPGGLIYYNSQLHSYRDFPMRV 354 Query: 133 YQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 ++ R EL G+MR R F D++ F L + K + + ++ Sbjct: 355 AELGRVHRHELSGALQGLMRVRAFTQDDSHIFMLPEQIKDE--IKGVANLIDGIYKTFGF 412 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ 251 + + P S E + +++ +I E Sbjct: 413 EYNLELSTRPENSMGSDE-----------------EWEAAENGLREALEELGLPYTINEG 455 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A Y D H L D L + +++ F T+ G DG+ H Sbjct: 456 DGAFYGPKIDFH---LKDCLGRTWQCGTIQLDMQLPRQFDN--------TYIGQDGEKHR 504 Query: 312 V-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + G++ ++ + +P ++P ++ ++ I D ++ Sbjct: 505 PVMIHRVAFGSIERFIGILI---EHYAGKFPVWLSPTQVKILPISDK---FMDYANEVKK 558 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L G V DD E+IG + A L P +IVG K V+D+ V ++ R G + Sbjct: 559 ELFDKGIRVELDDRAEKIGFKIREAQLEKVPYMLIVGEKEVADNNVSVRSRDKGEIGSIK 618 Query: 431 LEEVINYASHRFSNN 445 L+E I S + Sbjct: 619 LDEFIASISKEIESR 633 >gi|126698152|ref|YP_001087049.1| threonyl-tRNA synthetase [Clostridium difficile 630] gi|254974173|ref|ZP_05270645.1| threonyl-tRNA synthetase [Clostridium difficile QCD-66c26] gi|255091574|ref|ZP_05321052.1| threonyl-tRNA synthetase [Clostridium difficile CIP 107932] gi|255099679|ref|ZP_05328656.1| threonyl-tRNA synthetase [Clostridium difficile QCD-63q42] gi|255313300|ref|ZP_05354883.1| threonyl-tRNA synthetase [Clostridium difficile QCD-76w55] gi|255515991|ref|ZP_05383667.1| threonyl-tRNA synthetase [Clostridium difficile QCD-97b34] gi|255649082|ref|ZP_05395984.1| threonyl-tRNA synthetase [Clostridium difficile QCD-37x79] gi|306519197|ref|ZP_07405544.1| threonyl-tRNA synthetase [Clostridium difficile QCD-32g58] gi|123066930|sp|Q189B8|SYT_CLOD6 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|115249589|emb|CAJ67406.1| Threonyl-tRNA synthetase [Clostridium difficile] Length = 639 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 88/435 (20%), Positives = 155/435 (35%), Gaps = 41/435 (9%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L MI + G +LP G + + + RE + G IE+ P Sbjct: 238 AKKRDHRKLGKELGLF--MIPEEGPGFPMFLPKGMELKNELLKFWREIHRKAGYIEIESP 295 Query: 73 TLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + + LW SG + Y + M + +D+ P + + S + SYR+ P Sbjct: 296 IILNRKLWETSGHWYHYKENMYTVK-IDDEDYAIKPMNCPGGLIYYNSQLHSYRDFPMRV 354 Query: 133 YQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 ++ R EL G+MR R F D++ F L + K + + ++ Sbjct: 355 AELGRVHRHELSGALQGLMRVRAFTQDDSHIFMLPEQIKDE--IKGVANLIDGIYKTFGF 412 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ 251 + + P S E + +++ +I E Sbjct: 413 EYNLELSTRPENSMGSDE-----------------EWEAAENGLREALEELGLPYTINEG 455 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A Y D H L D L + +++ F T+ G DG+ H Sbjct: 456 DGAFYGPKIDFH---LKDCLGRTWQCGTIQLDMQLPRQFDN--------TYIGQDGEKHR 504 Query: 312 V-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + G++ ++ + +P ++P ++ ++ I D ++ Sbjct: 505 PVMIHRVAFGSIERFIGILI---EHYAGKFPVWLSPTQVKILPISDK---FMDYANEVKK 558 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L G V DD E+IG + A L P +IVG K V+D+ V ++ R G + Sbjct: 559 ELFDKGIRVELDDRAEKIGFKIREAQLEKVPYMLIVGEKEVADNNVSVRSRDKGEIGSIK 618 Query: 431 LEEVINYASHRFSNN 445 L+E I S + Sbjct: 619 LDEFIASISKEIESR 633 >gi|291557532|emb|CBL34649.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Eubacterium siraeum V10Sc8a] Length = 639 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 98/449 (21%), Positives = 162/449 (36%), Gaps = 44/449 (9%) Query: 2 RRSKY--FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 + S+ +L +++E RD +L L T M G +LP G + + R Sbjct: 225 KASELEAYLNMIEEAKKRDHRKLGKELELFTIM--DEGPGFPFFLPKGMTLKNTLIDYWR 282 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 + R G +E+S P + + LW SG +D Y + M +D P + ++ Sbjct: 283 QIHTRDGYVEISTPIMLNRQLWETSGHWDHYKENMYT-TVIDDTEFAIKPMNCPGGILVY 341 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +S +SYR+LP ++ L R E G+MR R F DA+ F + + K Sbjct: 342 KSKPRSYRDLPIRMGELGLVHRHEKSGALHGLMRVRCFTQDDAHIFMTPDQITDE--IKG 399 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 V + ++L + + P S E D Sbjct: 400 VVRLIDEVYKLFGFKYHVELSTQPEDSMGSQE-----------------DWDMATEGLRK 442 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D + + E A Y D H E DSL + ++ F ++ Sbjct: 443 ALDSLGLPYVVNEGDGAFYGPKIDFHLE---DSLGRTWQCGTIQLD----FQLPMRF--- 492 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + GADG+ H + G++ ++ G IW +AP ++ L+ I Sbjct: 493 -ELEYTGADGEKHRPIMIHRVVFGSIERFIGILTEHFAGAFPIW---LAPVQVELMPIAD 548 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + K+ A L K G V D E+IG + A L P +++G K V V Sbjct: 549 RH---NEFTSKVAAELKKRGIRVEVDGRSEKIGFKIREAQLQKIPYMLVIGDKEVETENV 605 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 I+ R G MS+ + + Sbjct: 606 SIRCRKRGDIGTMSVADFCDMVEKEIREK 634 >gi|148653933|ref|YP_001281026.1| threonyl-tRNA synthetase [Psychrobacter sp. PRwf-1] gi|172048584|sp|A5WHD5|SYT_PSYWF RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|148573017|gb|ABQ95076.1| threonyl-tRNA synthetase [Psychrobacter sp. PRwf-1] Length = 644 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 139/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD L L + + S G+ W P G + +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRKIGKALNLF--HMQEQSPGMVFWHPNGWTIYQVLEQYMRKVQKDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG + +Y M + P + +F +KSY Sbjct: 289 YQEIKTPQIVDRSLWEKSGHWGNYATNMFT-TSSESRDYAVKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+E G+MR R F DA+ F T + L + Sbjct: 348 RELPIRLAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TQAQIQEEVANFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I M+ + P + E D + D Sbjct: 407 YKDFGFDQIEMKLSTRPEKRVGTDE-----------------SWDIAEKALADALDSSGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L DSL + ++ + A F Sbjct: 450 EWEYLPGEGAFYGPKIEF---SLKDSLGRVWQCGTIQVDPNMP--------ERLEAEFVN 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + + +G+ ++ + G +W +++ D Sbjct: 499 ENNERETPIMLHRAILGSFERFLGMLIEHYAGWMPVWLAPQQVVVMNIT------DKQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 AC+ + + L G D E+IG + L P +++G K V +V ++ R Sbjct: 553 ACQNVASELQNAGLRAITDLRNEKIGFKIRERTLERIPYMLVLGDKEVESGQVNVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS+ + I + Sbjct: 613 ENLGVMSVADFIELVQKAVAQK 634 >gi|307822740|ref|ZP_07652971.1| threonyl-tRNA synthetase [Methylobacter tundripaludum SV96] gi|307736344|gb|EFO07190.1| threonyl-tRNA synthetase [Methylobacter tundripaludum SV96] Length = 635 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 147/445 (33%), Gaps = 41/445 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L L+E RD + L L + + G+ W G V IRE+ Sbjct: 229 QAYLHRLEEAEKRDHRKLAKTLDLF--HSQEEAPGMVFWHEKGWVIYQQVEQYIREKLRV 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW SG ++ + +M+ ++ P + I+ +K Sbjct: 287 NGYGEVKTPQVVDRSLWERSGHWEKF-GDMIFTTHSENRDYAIKPMNCPCHVQIYNQGLK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F+ DA+ F T + + Sbjct: 346 SYRDLPIRLAEFGSCHRNEPSGTLHGLMRVRNFVQDDAHIFC-TEGQIQDEVSTFIDMLF 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G + + ++ + P D + + Sbjct: 405 DVYKDFGFEEVIIKLSTRPANR-----------------VGDDSVWDKAENALELALNTK 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + L D + + ++ AT+ Sbjct: 448 GLKWDLQPGEGAFYGPKIEF---SLKDCIGRVWQCGTIQVDFSMPGRLD--------ATY 496 Query: 303 KGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 DG V + +G++ ++ + +P ++P ++ ++NI Sbjct: 497 IAEDGSRQVPVMLHRAILGSLERFIGILI---EQHAGTFPLWLSPVQVVVLNITDRHA-- 551 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + +I L K G V D E+IG + + P VI+G K + + ++ + Sbjct: 552 -EYAAQIMLDLEKQGIRVKIDLRNEKIGFKIREHSMQRVPYLVIIGDKELEQQSITVRTQ 610 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 +S+ E + + Sbjct: 611 KGDDLGSLSIHEFTERLKQEITGRQ 635 >gi|253682125|ref|ZP_04862922.1| threonine--tRNA ligase [Clostridium botulinum D str. 1873] gi|253561837|gb|EES91289.1| threonine--tRNA ligase [Clostridium botulinum D str. 1873] Length = 637 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 83/442 (18%), Positives = 156/442 (35%), Gaps = 42/442 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + G + P G + + RE + G Sbjct: 231 YLHMLEEAKKRDHRKLGKELGLFD--LKEEGPGFPFFYPKGMTLRNTLENYWREMHEKAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + +LW +SG +D Y + M + + P + +++S + SY Sbjct: 289 YGEIRTPIILNENLWHQSGHWDHYKENM-YFTKIDGEDYAIKPMNCPGSILVYKSDLHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP ++ L R E G+MR R F DA+ F + + + Sbjct: 348 RELPIRLGELGLVHRHEYSGALHGLMRVRNFTQDDAHIFMTKEQITSE-ILGVIKMIDNF 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + + P S E + ++ Sbjct: 407 YSLFGFEY-FVELSTRPEDSMGSDE-----------------DWEAATNGLVKALNEAGL 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D H + R + G I + ++ G Sbjct: 449 EYKINEGDGAFYGPKIDFHL----------RDCLGRTWQCGTI-QLDFQMPERFDLSYVG 497 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H G++ ++ + G W +AP ++ ++NI + + Sbjct: 498 ADGEKHRPVMAHRVIFGSIERFIGILTEHYAGAFPTW---LAPVQVKIMNITDN---QIE 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C++I L + G V D E+IG + A L P +++G K ++++ + ++ R Sbjct: 552 YCKEIEKTLKENGIRVELDLRNEKIGYKIREAQLQKIPYMLVLGDKEMNENTIAVRSRKQ 611 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G M L + + Sbjct: 612 GDLGAMQLVDFVAMVKKEVQEK 633 >gi|238021043|ref|ZP_04601469.1| hypothetical protein GCWU000324_00940 [Kingella oralis ATCC 51147] gi|237868023|gb|EEP69029.1| hypothetical protein GCWU000324_00940 [Kingella oralis ATCC 51147] Length = 637 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 76/440 (17%), Positives = 149/440 (33%), Gaps = 39/440 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R E G Sbjct: 234 YITRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPRGWTLWQVIEQHMRRELTAAG 291 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG + +Y M L + P + IF ++SY Sbjct: 292 YQEVKTPQIMDKTFWEKSGHWANYKDNMF-LTSSEKRDYAVKPMNCPGHVQIFNHGLRSY 350 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 +LP + R+E G+MR R F+ DA+ F + ++ + ++I Sbjct: 351 NDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIAEETRAFN-QLVMKI 409 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S E A+ G + +P E Sbjct: 410 YRQFGFHDVSIKLSLRPEKRAGSDEIWDKAEQGLRDALTACGVTWQELPGE--------- 460 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + Sbjct: 461 --------GAFYGPKVEYH---IKDALGRSWQCGTIQLD----FVLPERLDAEY---VTR 502 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + + V + +G++ ++ H G +W V +++ + D Sbjct: 503 DNNRARPVMLHRAILGSLERFIGILIEQHAGSFPLWLAPVQMVVMNIT------EKQADY 556 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 C ++ A+L G D E+IG + +P Q++VG K + + +V ++ Sbjct: 557 CREVVAKLQAAGFRAELDLRNEKIGYKIRDNSSQRYPYQIVVGDKEMENGQVAVRK-KAE 615 Query: 425 IREDMSLEEVINYASHRFSN 444 + +E+ I Sbjct: 616 DLGSLKVEDFIERLLEEMKT 635 >gi|209695239|ref|YP_002263168.1| threonyl-tRNA synthetase [Aliivibrio salmonicida LFI1238] gi|208009191|emb|CAQ79445.1| threonyl-tRNA synthetase [Aliivibrio salmonicida LFI1238] Length = 642 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 76/441 (17%), Positives = 140/441 (31%), Gaps = 40/441 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + + RD L L + Q + G+ W G + +RE+ Sbjct: 233 LIRLEEAAKRDHRKIGKHLDLF--HMQQEAPGMVFWHHNGWTIFRELEVFVREKLTEYDY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y + M ++ P + IF +KSYR Sbjct: 291 QEVKGPLMMERVLWERSGHWDKYAEAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYR 349 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + Sbjct: 350 DLPLRMAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFC-TEAQVQDEVKSCIEMVYDTY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G ++I ++ + P S E D + + Sbjct: 409 TTFGFENIVVKLSTRPEQRVGSDE-----------------MWDKAEADLQLALESMNIA 451 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y + L D L + ++ G AT+ G Sbjct: 452 YEIQEGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFALPERLG--------ATYVGE 500 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D + H + +G++ ++ + G W + + D Sbjct: 501 DNERHTPVMIHRAILGSLERFIGILIEDYAGFFPTWLAPEQAIVMGIT------DKQADY 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++I +L K G V D E+IG + L P ++ G + + ++ ++ R Sbjct: 555 VQEIAKKLQKNGFRVKADLRNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTRKGK 614 Query: 425 IREDMSLEEVINYASHRFSNN 445 +++ + + S Sbjct: 615 DLGKFKIDDFVAFLQQEVSTR 635 >gi|126667900|ref|ZP_01738865.1| threonyl-tRNA synthetase [Marinobacter sp. ELB17] gi|126627560|gb|EAZ98192.1| threonyl-tRNA synthetase [Marinobacter sp. ELB17] Length = 641 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 82/438 (18%), Positives = 154/438 (35%), Gaps = 39/438 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K ++ ++E RD KL L + + + G+ W P G + +R+ +R Sbjct: 229 KAYVHRIEEAEKRDHRKVGKKLNLF--HMQEEAPGMVFWHPDGWTIYQKMEQYMRDILHR 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + S LW +SG +D + + M + P + +F +K Sbjct: 287 HGYQEIKTPQIVSRSLWEKSGHWDKFKEGMFT-TESEKHDFAIKPMNCPCHIQVFNQGLK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP + R+E G+MR R F DA+ F + +K Sbjct: 346 SYKDLPLRLAEFGSCHRNEASGALHGLMRVRGFTQDDAHIFCEESDIQNE-VSKFIDLLH 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G I + + P S E ++ Q + +P E Sbjct: 405 EVYKDFGFTEILYKLSTRPEKRVGSDEVWDKSEAALEQALNREGVKWELLPGE------- 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + L D + + ++ G +Y Sbjct: 458 ----------GAFYGPKIEF---SLKDCIGRVWQCGTIQVDFSMPGRLGAQY-------V 497 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + V + +G+ ++ + +P +AP +++++NI + R Sbjct: 498 ADNSERKTPVMLHRAVLGSFERFIGILI---EEYEGAFPSWLAPTQVAILNITDN---QR 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + CE + + +G V D E+IG + + P V+VG K V ++ V ++ R Sbjct: 552 EYCENLAKKWDSLGFRVNADLRNEKIGFKIREHTINKVPFLVVVGDKEVENNTVAVRTRK 611 Query: 423 TGIREDMSLEEVINYASH 440 +SLE Sbjct: 612 GEDLGTLSLEAFEQLLQE 629 >gi|51245280|ref|YP_065164.1| threonyl-tRNA synthetase [Desulfotalea psychrophila LSv54] gi|50876317|emb|CAG36157.1| probable threonyl-tRNA synthetase [Desulfotalea psychrophila LSv54] Length = 657 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 81/440 (18%), Positives = 144/440 (32%), Gaps = 40/440 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 K+ I + RD +L L T M G+ WLP G + + + E R Sbjct: 248 KHLNNIEEAKKRDHRKLGKELELFT-MQDSIGPGLPLWLPKGARMRHQIEEFWKAEHYRH 306 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 + P + DLW SG D Y M D + P + ++++ +S Sbjct: 307 DYELLYTPHIARQDLWKTSGHLDFYADSMYAGMDIDGVTYQIKPMNCPFHVGVYKAKKRS 366 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+ P + ++ +R E G+MR R F DA+ F + + + L Sbjct: 367 YRDFPLRWCELGTVYRYERAGALHGLMRVRSFTQDDAHIFCRPEQLEDEIF-NILDFNLF 425 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I G + + P + E D + + Sbjct: 426 ILKSFGFSEYDIYLSTRPEKSVGTDE-----------------NWDKSTNALKLALEKKG 468 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I Y D+ K+ D L + + S ++ F ++ ++ Sbjct: 469 LKYEIDPGEGVFYGPKIDI---KIKDQLGRSWQCSTVQVD----FNLPERF----ELSYV 517 Query: 304 GADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G+D +H M + R + +IE + + A Sbjct: 518 GSDNSEHQPIMIHRALMGSLERFIGVLIEHHAGAFPLWFSPVQARILNIT-------DDQ 570 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + EK+YA L V D E++ + A L+ P +I+G K D V ++ R Sbjct: 571 IEYGEKVYAELRAADIRVEKDLRNEKLNYKIREAQLVKTPYMLIIGDKEKEDGTVTVRMR 630 Query: 422 LTGIREDMSLEEVINYASHR 441 + M+++E + Sbjct: 631 NGKNLDPMTVQEFVALVLEE 650 >gi|269792334|ref|YP_003317238.1| threonyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099969|gb|ACZ18956.1| threonyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 631 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 84/440 (19%), Positives = 151/440 (34%), Gaps = 41/440 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E RD ++ L + I G + P G L+ + + E R G Sbjct: 228 YLNRLEEARQRDHRKIGREMDLFS--IQPEGPGFPFFHPKGMVILNELVDFWKREHKRRG 285 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW SG +D Y M +D+ P + +F+S +SY Sbjct: 286 YNEIRTPLILDRSLWERSGHWDHYRDNM-YFTSIDDRPFAIKPMNCPGGILVFKSSTRSY 344 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ + R E G+MR R F DA+ + + + + Sbjct: 345 RDLPLRMSELGVVHRHERSGVLHGLMRVRCFTQDDAHIYCTPDQVGDE-IAGVIDLMKYV 403 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + ++ + + + P S E + + + Sbjct: 404 YSQVFGFNYRVELSTRPDNYMGSLE-----------------LWNLAEEKLKQTLEATGT 446 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I A Y D H E DS+ + ++ F K+ ++ G Sbjct: 447 DYKINPGDGAFYGPKIDFHLE---DSIGRTWQCGTIQLD----FQMPEKFD----VSYVG 495 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG DH + G++ ++ + G W V + + D Sbjct: 496 ADGADHRPVMIHRTVFGSLERFLGILIEHYAGAFPFWLAPVQVRVLPVKP------EFED 549 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ A L G V D E++G + A L P +++G+K V ++HR Sbjct: 550 RSRQVEAALKSWGVRVEVDVRDEKLGKKIRDAQLSKVPYMIVIGAKEAETGGVSVRHRSD 609 Query: 424 GIREDMSLEEVINYASHRFS 443 G MS++ + + F Sbjct: 610 GDLGTMSMDVLRDRLQGEFK 629 >gi|311105446|ref|YP_003978299.1| threonyl-tRNA synthetase [Achromobacter xylosoxidans A8] gi|310760135|gb|ADP15584.1| threonyl-tRNA synthetase [Achromobacter xylosoxidans A8] Length = 650 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 78/447 (17%), Positives = 144/447 (32%), Gaps = 41/447 (9%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E R D +L L + G+ W P G V +R Sbjct: 234 EAYLHMLEEAERRDHRKIGRELELF--HFQDEAPGLIFWHPKGWALWQQVEQYMRSVYRD 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW ++G +D+Y + M + ++ P + IF + + Sbjct: 292 NGYQEVKAPQILDISLWKKTGHWDNYRENMFT-TESENRVYGLKPMNCPGHVQIFNAGLH 350 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP + + R+E G+MR R F D + F + Sbjct: 351 SYRELPLRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEEQLQDEC-ADFTALLQ 409 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +++ G + + + P S E A+ + P E Sbjct: 410 KVYRDFGFTEVLYKVATRPEKRIGSDEVWDTAEAALMESLRRTGCEFEVSPGE------- 462 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + L D++ + + ++ G A + Sbjct: 463 ----------GAFYGPKVEY---TLKDAIGRHWQCGTIQVDFSMPVRLG--------AEY 501 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + + + +G++ ++ +H G W V + + Sbjct: 502 VDQNDQRRPPVMLHRAILGSLERFIGMLIENHAGAMPPWLAPVQAVVCCI------SEPS 555 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D +I L K G V D GE+I + L P ++VG K + V ++ Sbjct: 556 ADYAAEITQSLKKQGFRVESDLRGEKITRKIREHSLQKVPYILVVGDKEKQNGTVAVRGL 615 Query: 422 LTGIREDMSLEEVINYASHRFSNNRPV 448 ++ +E + S S R V Sbjct: 616 GGLDLGAIAYDEFVARLSEDVSTRRDV 642 >gi|153955810|ref|YP_001396575.1| threonyl-tRNA synthetase [Clostridium kluyveri DSM 555] gi|219856177|ref|YP_002473299.1| hypothetical protein CKR_2834 [Clostridium kluyveri NBRC 12016] gi|189083603|sp|A5N258|SYT_CLOK5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783517|sp|B9E5W0|SYT_CLOK1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|146348668|gb|EDK35204.1| ThrS [Clostridium kluyveri DSM 555] gi|219569901|dbj|BAH07885.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 637 Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 84/442 (19%), Positives = 154/442 (34%), Gaps = 42/442 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +++E RD +L L + IH+ G + P G + + RE + Sbjct: 231 YLKLMEEAKKRDHRKLGKELDLFS--IHEEGPGFPFFHPKGMVIRNTLQNFWREMHYKAD 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + +LW SG +D Y + M +D P + ++++ I+SY Sbjct: 289 YSEIMTPIILNEELWHRSGHWDHYKENM-YFTKIDDGNYAIKPMNCPGSILVYKNDIRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + ++ + R E G+MR R F DA+ F + + + Sbjct: 348 RDLPKRYAEMGVVHRHEKSGALHGLMRVRCFTQDDAHIFVTKDDIADEIIK-VIDLIDNF 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + + P S E + + Sbjct: 407 YKIFGFEY-FVELSTRPEDSMGSDE-----------------DWEAATEGLKNALKMVGL 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D H K R + G + + + G Sbjct: 449 DYKINEGDGAFYGPKIDFHL----------KDCIGRTWQCGTV-QLDFQMPEKFDLNYIG 497 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + G++ ++ + +P +AP ++ ++NI D Sbjct: 498 ADGEKHRPVMIHRVVFGSIERFIGILI---EHYAGAFPAWIAPVQVQVMNIT---DAQAD 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L + V D E+IG + A + P +I+G K + D + ++ R Sbjct: 552 YVAEVAKTLKENNIRVECDIRNEKIGYKIREAQMHKVPYMIILGDKEMKDKNISVRSRKE 611 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G MSLE+ I Sbjct: 612 GDIGAMSLEDFILKLKEEIDKK 633 >gi|260682273|ref|YP_003213558.1| threonyl-tRNA synthetase [Clostridium difficile CD196] gi|260685872|ref|YP_003217005.1| threonyl-tRNA synthetase [Clostridium difficile R20291] gi|260208436|emb|CBA60998.1| threonyl-tRNA synthetase [Clostridium difficile CD196] gi|260211888|emb|CBE02332.1| threonyl-tRNA synthetase [Clostridium difficile R20291] Length = 670 Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 88/435 (20%), Positives = 155/435 (35%), Gaps = 41/435 (9%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L MI + G +LP G + + + RE + G IE+ P Sbjct: 269 AKKRDHRKLGKELGLF--MIPEEGPGFPMFLPKGMELKNELLKFWREIHRKAGYIEIESP 326 Query: 73 TLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + + LW SG + Y + M + +D+ P + + S + SYR+ P Sbjct: 327 IILNRKLWETSGHWYHYKENMYTVK-IDDEDYAIKPMNCPGGLIYYNSQLHSYRDFPMRV 385 Query: 133 YQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 ++ R EL G+MR R F D++ F L + K + + ++ Sbjct: 386 AELGRVHRHELSGALQGLMRVRAFTQDDSHIFMLPEQIKDE--IKGVANLIDGIYKTFGF 443 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ 251 + + P S E + +++ +I E Sbjct: 444 EYNLELSTRPENSMGSDE-----------------EWEAAENGLREALEELGLPYTINEG 486 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A Y D H L D L + +++ F T+ G DG+ H Sbjct: 487 DGAFYGPKIDFH---LKDCLGRTWQCGTIQLDMQLPRQFDN--------TYIGQDGEKHR 535 Query: 312 V-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + G++ ++ + +P ++P ++ ++ I D ++ Sbjct: 536 PVMIHRVAFGSIERFIGILI---EHYAGKFPVWLSPTQVKILPISDK---FMDYANEVKK 589 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L G V DD E+IG + A L P +IVG K V+D+ V ++ R G + Sbjct: 590 ELFDKGIRVELDDRAEKIGFKIREAQLEKVPYMLIVGEKEVADNNVSVRSRDKGEIGSIK 649 Query: 431 LEEVINYASHRFSNN 445 L+E I S + Sbjct: 650 LDEFIASISKEIESR 664 >gi|296449369|ref|ZP_06891150.1| threonine--tRNA ligase [Clostridium difficile NAP08] gi|296880697|ref|ZP_06904650.1| threonine--tRNA ligase [Clostridium difficile NAP07] gi|296261715|gb|EFH08529.1| threonine--tRNA ligase [Clostridium difficile NAP08] gi|296428315|gb|EFH14209.1| threonine--tRNA ligase [Clostridium difficile NAP07] Length = 670 Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 88/435 (20%), Positives = 156/435 (35%), Gaps = 41/435 (9%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L MI + G +LP G + + + RE + G IE+ P Sbjct: 269 AKKRDHRKLGKELGLF--MIPEEGPGFPMFLPKGMELKNELLKFWREIHRKAGYIEIESP 326 Query: 73 TLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + + LW SG + Y + M + +D+ P + + S + SYR+ P Sbjct: 327 IILNRKLWETSGHWYHYKENMYTVK-IDDEDYAIKPMNCPGGLIYYNSQLHSYRDFPMRV 385 Query: 133 YQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 ++ R EL G+MR R F D++ F L + K + + ++ Sbjct: 386 AELGRVHRHELSGALQGLMRVRAFTQDDSHIFMLPEQIKDE--IKGVANLIDGIYKTFGF 443 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ 251 + + P S+E + +++ +I E Sbjct: 444 EYNLELSTRPENSMGSNE-----------------EWEAAENGLREALEELGLPYTINEG 486 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A Y D H L D L + +++ F T+ G DG+ H Sbjct: 487 DGAFYGPKIDFH---LKDCLGRTWQCGTIQLDMQLPRQFDN--------TYIGQDGEKHR 535 Query: 312 V-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + G++ ++ + +P ++P ++ ++ I D ++ Sbjct: 536 PVMIHRVAFGSIERFIGILI---EHYAGKFPVWLSPTQVKILPISDK---FMDYANEVKK 589 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L G V DD E+IG + A L P +IVG K V+D+ V ++ R G + Sbjct: 590 ELFDKGIRVELDDRAEKIGFKIREAQLEKVPYMLIVGEKEVADNNVSVRSRDKGEIGSIK 649 Query: 431 LEEVINYASHRFSNN 445 L+E I S + Sbjct: 650 LDEFIASISKEIESR 664 >gi|71282219|ref|YP_269610.1| threonyl-tRNA synthetase [Colwellia psychrerythraea 34H] gi|123747383|sp|Q480A9|SYT_COLP3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|71147959|gb|AAZ28432.1| threonyl-tRNA synthetase [Colwellia psychrerythraea 34H] Length = 636 Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 85/443 (19%), Positives = 154/443 (34%), Gaps = 40/443 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + + RD L L + + G+ W G + IRE+ + Sbjct: 232 YIVRLAEAEKRDHRKIGKTLDLF--HWQEEAPGMVFWHNDGWTIYTELEKFIREKLHEYD 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D Y M + P + IF +KSY Sbjct: 290 YDEVKAPMMMDRSLWEKSGHWDKYADGMFTTT-SEKREYAIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + + K + Sbjct: 349 RDLPLRIAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCM-ESQVQAEVKKCIEMVYDV 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + ++ + P S E A+ G Q + +P E Sbjct: 408 YGSFGFEDVVVKLSTRPDNRIGSDEIWDKAEAGLAQALTDSNIAFEYLPGE--------- 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ G AT+ G Sbjct: 459 --------GAFYGPKIEF---TLMDCLGRAWQCGTVQLDFALPERLG--------ATYVG 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + + + +G++ ++ GK W ++P + +++NI Sbjct: 500 EDNERYTPVMIHRAILGSLERFIGILIEEFTGKFPTW---LSPIQTTIMNITDK---QAP 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 CEK+ +L + G D E+IG + L P ++VG K + ++ ++ R Sbjct: 554 YCEKVVKKLKENGFRAKIDLRNEKIGFKIREHTLKRVPYLLVVGDKEMESGEISVRTRSG 613 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 MS+++ I S + + Sbjct: 614 EDLGKMSVDDFIAKLSDEVKSRQ 636 >gi|119945879|ref|YP_943559.1| threonyl-tRNA synthetase [Psychromonas ingrahamii 37] gi|166225485|sp|A1SWU5|SYT_PSYIN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|119864483|gb|ABM03960.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Psychromonas ingrahamii 37] Length = 635 Score = 266 bits (681), Expect = 4e-69, Method: Composition-based stats. Identities = 73/448 (16%), Positives = 145/448 (32%), Gaps = 41/448 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ +L L+E RD +L L + + + G+ W G + +RE+ Sbjct: 226 KQLNAYLKRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHSNGWTIYRELEKYVREQ 283 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 E+ P + LW +SG + Y M ++ P + IF Sbjct: 284 TEAYDYQEVKAPQILDRALWEKSGHWGKYKDNMF-CTSSENRDYAIKPMNCPGHLQIFNQ 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F + + Sbjct: 343 GLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRAFTQDDAHIFCTEEQILDE-VSACIQ 401 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + G I ++ + P D + Sbjct: 402 MVFECYKTFGFDDIAVKLSTRPDQR-----------------VGDDATWDKAEAALANAL 444 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ A Y + L+D L + ++ Sbjct: 445 TTNNINYGVLPGEGAFYGPKIEF---TLYDCLGRGWQCGTIQLDFSMPGRLD-------- 493 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A+F G D + H + +G++ ++ + ++P ++P ++ ++NI Sbjct: 494 ASFVGEDNERHTPVMIHRAILGSLERFIGILT---EEYAGVYPTWLSPKQVVVMNITDK- 549 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 +++ +L K G D E+IG + L P +++G + V +V + Sbjct: 550 --QSAFVDEVVNKLKKSGIRAISDLRNEKIGFKIREHTLKRVPYLLVIGDQEVEAGEVAV 607 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNNR 446 + R +++ Y R Sbjct: 608 RTRKGDDLGKFKVDDFAAYIKEEIITRR 635 >gi|89073900|ref|ZP_01160406.1| threonyl-tRNA synthetase [Photobacterium sp. SKA34] gi|89050228|gb|EAR55732.1| threonyl-tRNA synthetase [Photobacterium sp. SKA34] Length = 631 Score = 266 bits (681), Expect = 4e-69, Method: Composition-based stats. Identities = 81/436 (18%), Positives = 145/436 (33%), Gaps = 40/436 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G + IRE+ N Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWTIFRELEVFIREKLNEYDY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFC-TEAQVQQEVTSCIEMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +I ++ + P S + D E+ + + + M+ P + Sbjct: 410 KTFGFDNIVVKLSTRPEKRVGSD---AMWDKAESDLITALESMEIPFEIQ---------- 456 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y + L D L + ++ G AT+ G Sbjct: 457 ----EGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFALPERLG--------ATYVGE 501 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D + H + +G++ ++ + G W +++ + Sbjct: 502 DNERHTPVMIHRAILGSLERFIGILIEDYAGFFPTWLAPQQAVVMNIT------DAQSEY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++I +L K G V D E+IG + L P ++ G K V V ++ R Sbjct: 556 VQEIVEKLKKCGIRVNADLRNEKIGFKIREHTLKRVPFMLVCGDKEVEAGVVAVRTRKGK 615 Query: 425 IREDMSLEEVINYASH 440 ++E++ + Sbjct: 616 DLGKFKIDELVAFMQE 631 >gi|258592606|emb|CBE68915.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS) [NC10 bacterium 'Dutch sediment'] Length = 680 Score = 266 bits (681), Expect = 4e-69, Method: Composition-based stats. Identities = 76/445 (17%), Positives = 146/445 (32%), Gaps = 42/445 (9%) Query: 8 LPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E R D +L L + + G+ W P G + + RE+ + G Sbjct: 260 LFLLEEAKRRDHRRLGRELELFSVH-DEIGGGLVLWHPKGALVRKLIEDLWREQHLKNGY 318 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P + A LW SG D Y + M + P + +F+S + SYR Sbjct: 319 DLVYTPHVGRATLWETSGHLDFYQEFMYPRMEMEGNDYYVKPMNCPFHIKLFQSKVHSYR 378 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP F ++ +R E G++R R F DA+ F + Sbjct: 379 ELPVRFAELGTVYRFERAGVLHGLLRVRGFTQDDAHIFCTPQQMVSE------------- 425 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + + + + T + ++ + + DD Sbjct: 426 -----VARAVSFSLAFLSSFGFDRYDAYIATRPEKAIGDQELWNDATEALRRAADDAGLA 480 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I + A Y D+ K+ D+L + + + F ++ T+ G Sbjct: 481 YQIDDGGGAFYGPKIDL---KVRDALGRAWQCTTVQFD----FNLPERFD----ITYVGE 529 Query: 306 DGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D + H + +G++ V+ H G W + + Sbjct: 530 DNRPHRPFMVHRAILGSLERFFGVLVEHHAGAFPTW------LAPVQARLVPVADRFQPY 583 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ +L G D E++G + A++ P ++VG K + V ++ R Sbjct: 584 AQQVSEQLRAAGIRTETDVRNEKVGYKIRDAEMQKTPYILVVGEKEATSGAVSVRGRGGR 643 Query: 425 IREDMSLEEVINYASHRFSNNRPVL 449 M +++ +P L Sbjct: 644 DMGVMPIDQFAAAIQEEL---KPAL 665 >gi|121634517|ref|YP_974762.1| threonyl-tRNA synthetase [Neisseria meningitidis FAM18] gi|120866223|emb|CAM09963.1| putative threonyl-tRNA synthetase [Neisseria meningitidis FAM18] gi|325131827|gb|EGC54527.1| threonyl-tRNA synthetase [Neisseria meningitidis M6190] Length = 648 Score = 266 bits (681), Expect = 4e-69, Method: Composition-based stats. Identities = 83/441 (18%), Positives = 158/441 (35%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 242 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAG 299 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 300 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 358 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 359 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 417 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S E A+ G + +P E Sbjct: 418 YKQFGFHDVAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACGVEWEELPGE--------- 468 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 469 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LDAEYVT 509 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 510 ENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 563 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q++VG K ++KV ++ R Sbjct: 564 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-RKA 622 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 623 EDLGSLDLDDFIAQLQQEITD 643 >gi|284799642|ref|ZP_05984463.2| threonine--tRNA ligase [Neisseria subflava NJ9703] gi|284797591|gb|EFC52938.1| threonine--tRNA ligase [Neisseria subflava NJ9703] Length = 643 Score = 266 bits (681), Expect = 4e-69, Method: Composition-based stats. Identities = 82/438 (18%), Positives = 159/438 (36%), Gaps = 41/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 237 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAG 294 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +++Y M + + P + IF + ++SY Sbjct: 295 YKEVKTPQIMDKTFWEKSGHWENYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 353 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 354 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCAEDQIVDEARAFN-ELLVRI 412 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S E A+ G + +P E Sbjct: 413 YKQFGFHDVAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACGVEWEELPGE--------- 463 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + ++A + Sbjct: 464 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LNAEYVT 504 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 505 ENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 558 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G V D E+IG + FP Q++VG K ++KV ++ R Sbjct: 559 YCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-RKA 617 Query: 424 GIREDMSLEEVINYASHR 441 +++++ I Sbjct: 618 EDLGSLNVDDFIAQLQQE 635 >gi|325137877|gb|EGC60452.1| threonyl-tRNA synthetase [Neisseria meningitidis ES14902] Length = 637 Score = 266 bits (681), Expect = 4e-69, Method: Composition-based stats. Identities = 83/441 (18%), Positives = 158/441 (35%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 231 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 289 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 348 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S E A+ G + +P E Sbjct: 407 YKQFGFHDVAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACGVEWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 458 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LDAEYVT 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 499 ENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q++VG K ++KV ++ R Sbjct: 553 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-RKA 611 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 612 EDLGSLDLDDFIAQLQQEITD 632 >gi|152980466|ref|YP_001353177.1| threonyl-tRNA synthetase [Janthinobacterium sp. Marseille] gi|166223349|sp|A6SY30|SYT_JANMA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|151280543|gb|ABR88953.1| threonyl-tRNA synthetase [Janthinobacterium sp. Marseille] Length = 635 Score = 266 bits (680), Expect = 5e-69, Method: Composition-based stats. Identities = 71/443 (16%), Positives = 152/443 (34%), Gaps = 39/443 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD +L + + G+ W P G V +R+ Sbjct: 229 EAYLHMLEEAEKRDHRKLGKQLDFF--HFQEEAPGLIFWHPKGWSIWQQVEQYMRKVYQD 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P + LW ++G +D+Y + M + + +++ P + I+ S ++ Sbjct: 287 NDYQEVKAPQILDRGLWEKTGHWDNYRENMF-VTESENRSYALKPMNCPGHVQIYNSDMR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + + R+E G+MR R F D + F + ++ + Sbjct: 346 SYRDLPLRYGEFGQCHRNEPSGALHGMMRVRGFTQDDGHIFCTEEQIAEE-VTAFHAQAM 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G ++I ++ P + E D S + Sbjct: 405 AVYAAFGFENIDVKLALRPDSRIGTEE-----------------SWDIAEESLRSALRAC 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + + A Y + H L DSL +V I+ G +Y Sbjct: 448 GVSWTELPGEGAFYGPKIEYH---LKDSLGRAWQVGTVQIDPSMPGRLGAEY-------V 497 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + + + +G++ ++ + G +W + + + D Sbjct: 498 AVDNTRKTPIMLHRAIVGSLERFIGILIEHYAGALPLWLA-----PVQIAVLNISDAQA- 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + + + L K G V D E+I + + P +++G K V ++ R Sbjct: 552 EYAQAVAQNLKKQGFRVHLDLRNEKITYKIREHSVQKLPYIIVIGDKERDAGTVAVRARG 611 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 M ++ +++ + Sbjct: 612 NVDLGVMPVDLLVDRLNSEIDAK 634 >gi|292493207|ref|YP_003528646.1| threonyl-tRNA synthetase [Nitrosococcus halophilus Nc4] gi|291581802|gb|ADE16259.1| threonyl-tRNA synthetase [Nitrosococcus halophilus Nc4] Length = 644 Score = 266 bits (680), Expect = 5e-69, Method: Composition-based stats. Identities = 76/445 (17%), Positives = 159/445 (35%), Gaps = 39/445 (8%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIRE 59 + K +L L+E RD +L L + I + G+ W P+G + + RE Sbjct: 226 KALKAYLHRLEEAEKRDHRRIGTELDLFS--IQDEAGGGLVFWHPMGARIRQVIEDFWRE 283 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 G + P + LW SG D Y + M + + + + P + +++ Sbjct: 284 RHRAAGYETLYTPHIAHQQLWQTSGHTDFYRESMYQPMEEDHQLYQLKPMNCPFHVLVYK 343 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 ++SYR LP + ++ +R E+ G+MR R F DA+ F + + Sbjct: 344 GRLRSYRELPLRWAELGTVYRHEMSGALHGLMRVRGFTQDDAHIFCREEQIEDE-ILGIL 402 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L + G + + + P S + + + Sbjct: 403 DLTLEMLSAFGFERYEVDLSTRPEKS-----------------VGSDAIWERATQALRSA 445 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + ++ E A Y D+ K+ D++ + S ++ F ++ + Sbjct: 446 LEKKGLDYAVDEGGGAFYGPKIDI---KIEDAIGRKWQCSTVQLD----FNLPERFEMEY 498 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + + + +G++ V+ ++ +P +AP +++++NI Sbjct: 499 VAE---DGARHQPIMIHRAVLGSLERFFGVLIEHYE---GKFPPWLAPVQVAVMNITDR- 551 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + ++ L G D E+IG + L P +++G + V + V + Sbjct: 552 --QAEYACQVEETLKNKGFRSLLDLRNEKIGFKIREHTLRRVPYLLVIGDREVENQTVAV 609 Query: 419 KHRLTGIREDMSLEEVINYASHRFS 443 + R + MSL+ I + Sbjct: 610 RTRYSKDLGAMSLDAFIERLDADIA 634 >gi|238919782|ref|YP_002933297.1| threonyl-tRNA synthetase [Edwardsiella ictaluri 93-146] gi|259516479|sp|C5B846|SYT_EDWI9 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238869351|gb|ACR69062.1| threonyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146] Length = 642 Score = 266 bits (680), Expect = 5e-69, Method: Composition-based stats. Identities = 78/442 (17%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + A +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNSCIKMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D + Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------IWDRAEEDLAAALQENGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ F + S A++ G Sbjct: 451 PFEYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + V + +G+M ++ G W V +++ + Sbjct: 500 ENNERVVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQAVVMNIT------DSQAE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVEELSKKLQAAGIRVKSDLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS+++VI + Sbjct: 614 KDLGVMSIDDVIKKLQQEIRSR 635 >gi|282850470|ref|ZP_06259849.1| threonine--tRNA ligase [Veillonella parvula ATCC 17745] gi|282579963|gb|EFB85367.1| threonine--tRNA ligase [Veillonella parvula ATCC 17745] Length = 636 Score = 266 bits (680), Expect = 5e-69, Method: Composition-based stats. Identities = 80/441 (18%), Positives = 145/441 (32%), Gaps = 40/441 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L I + G +LP G + + RE + Sbjct: 233 YLHMLEEAAKRDHRKLGKELGLFV--IKEEGPGFPFFLPKGMALRNELENFWREVHHDFD 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + S LW SG +D Y + M +D+ P + ++++ + SY Sbjct: 291 YEEIRTPIILSKHLWETSGHWDHYRENMYT-TIIDDEEYAIKPMNCPGGILVYQNEMHSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+ P + ++ L R EL G+ R R F DA+ F L + + + Sbjct: 350 RDFPLRYAELGLVHRHELSGALHGLFRVRAFTQDDAHVFMLPDQMQTELMKVIELF---- 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 I ++ V T + + + Sbjct: 406 ---------------DRIYSQFGLKYHVELSTKPDNAMGDDAIWEQATDALRNAIEAKGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I A Y D H E DSL + +++ + G Sbjct: 451 PYVINPGDGAFYGPKLDYHIE---DSLGRTWQCGTIQLDMNLP--------ERFQIEYIG 499 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H M I + +P +AP ++ ++ I + + Sbjct: 500 EDGQKHRPIMIHRACFGSMERFIGIL--TEHYAGAFPTWMAPVQVKILPI---SEKHVEY 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ ++ + V DD E+IG + A + P ++VG K V + V ++ Sbjct: 555 AKELAKQMHRDYVRVEVDDRSEKIGYKIRQAQMAKVPYMLVVGDKEVEEGTVNVRKHGGD 614 Query: 425 IREDMSLEEVINYASHRFSNN 445 + EE N Sbjct: 615 ELGSVPFEEFFNSIKIEIKER 635 >gi|88706032|ref|ZP_01103740.1| threonyl-tRNA synthetase [Congregibacter litoralis KT71] gi|88699746|gb|EAQ96857.1| threonyl-tRNA synthetase [Congregibacter litoralis KT71] Length = 645 Score = 266 bits (680), Expect = 5e-69, Method: Composition-based stats. Identities = 77/438 (17%), Positives = 143/438 (32%), Gaps = 40/438 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y I + RD KL L + + G+ W P G + +RE+Q Sbjct: 228 LKQYLHRIEEAEKRDHRKIGKKLDLF--HTQEEAPGMVFWHPQGWTIYQVIEQYMREQQR 285 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P L LW +SG D +G +M + +++ P + +F + Sbjct: 286 ANGYQEIKTPQLVDMSLWEKSGHADKFGDDMF-MLQADEREFAVKPMNCPCHVQVFNQGL 344 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP + R+E G+MR R F D + F + + Sbjct: 345 RSYRDLPLRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDGHIFCTEEQIQSE-VSTFIDFL 403 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G + R + P S E A+ +++ +P E Sbjct: 404 HAVYRDFGFDEVIYRLSTRPPKRVGSDEDWDRAEKALADALDAQELDWQELPGE------ 457 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 A Y + L D + ++ ++ A Sbjct: 458 -----------GAFYGPKIEF---SLKDCIGRVWQMGTVQVDFSMPGRLD--------AQ 495 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + DG + +G+ ++ + +G +W +++ + Sbjct: 496 YVAEDGSRKTPVMLHRAILGSFERFIGILIENFEGAFPVWLAPKQAVVLNIT------EK 549 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + + + L G VF D E+IG + + P ++VG K V V ++ Sbjct: 550 QDEYVQFVEDSLKNKGFRVFSDLRNEKIGFKIREHTIQRIPYLLVVGEKEVEAKTVAVRS 609 Query: 421 RLTGIREDMSLEEVINYA 438 R MS+E Sbjct: 610 RNGEDLGTMSIEAFAEIL 627 >gi|311693962|gb|ADP96835.1| threonyl-tRNA synthetase [marine bacterium HP15] Length = 641 Score = 266 bits (680), Expect = 5e-69, Method: Composition-based stats. Identities = 86/441 (19%), Positives = 154/441 (34%), Gaps = 39/441 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L L+E RD KL L + + + G+ W P G + +R +Q Sbjct: 229 KAYLHRLEEAEKRDHRKVGKKLGLF--HMQEEAPGMVFWHPDGWSLYQEIEQYMRRKQQE 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + S +LW +SG +D + +M + P + +F +K Sbjct: 287 HGYKEIKTPQVVSRNLWEKSGHWDKFKDDMFT-TESEKHDYAIKPMNCPCHVQVFNQGLK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP + R+E G+MR R F DA+ F + + Sbjct: 346 SYKDLPLRLAEFGSCHRNEASGALHGLMRVRGFTQDDAHIFCEEDAIQQE-VSSFIEMLH 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 I+ G I + + P S E A+ + + +P E Sbjct: 405 EIYTDFGFTEILYKLSTRPEKRVGSDEVWDKAEAALEEALNREGVDWELLPGE------- 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + L D + + ++ G +Y Sbjct: 458 ----------GAFYGPKIEF---SLKDCIGRVWQCGTIQVDFSMPGRLGAQY-------V 497 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + V + +G+ ++ ++G W +AP +++++NI + R Sbjct: 498 ADNSERKTPVMLHRAVLGSFERFIGILIEEYEGAFPTW---LAPTQVAILNITDN---QR 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D C+ + + +G V D E+IG + L P V+VG K V ++ V ++ R Sbjct: 552 DYCQNLAKKWDSLGYRVNADLRNEKIGFKIREHTLNKVPYLVVVGDKEVENNAVAVRTRK 611 Query: 423 TGIREDMSLEEVINYASHRFS 443 +SLE Sbjct: 612 GEDLGTLSLEAFEQLLQKDVE 632 >gi|330951866|gb|EGH52126.1| threonyl-tRNA synthetase [Pseudomonas syringae Cit 7] Length = 640 Score = 266 bits (679), Expect = 6e-69, Method: Composition-based stats. Identities = 81/442 (18%), Positives = 147/442 (33%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L I + RD +L L + + G+ W P G + +R+ Q G Sbjct: 231 YILRIEEAEKRDHRKIGKRLGLF--HTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG + +Y M + + P + +F +KSY Sbjct: 289 YLEIKTPQVVDRSLWEKSGHWANYADNMFT-TESESRDYAIKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+E G+MR R F DA+ F + S L + Sbjct: 348 RELPMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAES-AAFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K I ++ + P S E D + + D Sbjct: 407 YADFGFKDIELKLSTRPEKRVGSDE-----------------LWDRAESALASALDSAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ F + S A + Sbjct: 450 PYDLQPGEGAFYGPKIEF---SLKDCLGRVWQCGTLQLD----FNLPIRLS----AEYVS 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ ++ +P +AP + ++NI D Sbjct: 499 EDNSRKNPVMLHRAILGSFERFIGILIEHYE---GAFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L++ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + + + S Sbjct: 613 ADLGSMPVAQFAEFLAQAVSRR 634 >gi|289673298|ref|ZP_06494188.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5] gi|330898079|gb|EGH29498.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 640 Score = 266 bits (679), Expect = 6e-69, Method: Composition-based stats. Identities = 81/442 (18%), Positives = 147/442 (33%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L I + RD +L L + + G+ W P G + +R+ Q G Sbjct: 231 YILRIEEAEKRDHRKIGKRLGLF--HTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG + +Y M + + P + +F +KSY Sbjct: 289 YLEIKTPQVVDRSLWEKSGHWANYADNMFT-TESESRDYAIKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+E G+MR R F DA+ F + S L + Sbjct: 348 RELPMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAES-AAFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K I ++ + P S E D + + D Sbjct: 407 YADFGFKDIELKLSTRPEKRVGSDE-----------------LWDRAESALASALDSAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ F + S A + Sbjct: 450 PYDLQPGEGAFYGPKIEF---SLKDCLGRVWQCGTLQLD----FNLPIRLS----AEYVS 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ ++ +P +AP + ++NI D Sbjct: 499 EDNSRKNPVMLHRAILGSFERFIGILIEHYE---GAFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L++ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + + + S Sbjct: 613 ADLGSMPVAQFAEFLAQAVSRR 634 >gi|253998429|ref|YP_003050492.1| threonyl-tRNA synthetase [Methylovorus sp. SIP3-4] gi|313200504|ref|YP_004039162.1| threonyl-tRNA synthetase [Methylovorus sp. MP688] gi|253985108|gb|ACT49965.1| threonyl-tRNA synthetase [Methylovorus sp. SIP3-4] gi|312439820|gb|ADQ83926.1| threonyl-tRNA synthetase [Methylovorus sp. MP688] Length = 640 Score = 266 bits (679), Expect = 6e-69, Method: Composition-based stats. Identities = 84/438 (19%), Positives = 146/438 (33%), Gaps = 41/438 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD +L + + G+ W P G V +R + Sbjct: 234 EAYLHMLEEAEKRDHRKLGKQLDYF--HMQDEAPGMVFWHPRGWNLWQEVEQYMRGLFRQ 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ PT+ LW +SG + +Y + M ++ P + IF S + Sbjct: 292 YGYQEVKTPTIMDRSLWEKSGHWQNYRENMFT-TSSENRDYAVKPMNCPGHIQIFNSGLH 350 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F DA+ F T + K V Sbjct: 351 SYRDLPLRLAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFC-TEDQVKQEVADFIVMLY 409 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + + G + ++ + P S E D S + Sbjct: 410 QAYKDFGFNDVLVKLSTRPEKRVGSDE-----------------TWDKAEASLAAALREN 452 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + L DSL + ++ G A + Sbjct: 453 NLAFDLQPGEGAFYGPKIEF---TLKDSLGRLWQCGTIQLDFNLPERLG--------AEY 501 Query: 303 KGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D H V + +G+M ++ + P +AP + ++NI Sbjct: 502 VAEDNTRKHPVMLHRAIVGSMERFLGILI---ENYAGAMPTWLAPVQAMVLNITDS---Q 555 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +++ A L K G V D E+I + L P ++ G + + +V ++ R Sbjct: 556 SAYVQEVVAELRKNGFRVDSDLRNEKITYKIREHSLQKLPYLLVAGDREMQSGQVAVRTR 615 Query: 422 LTGIREDMSLEEVINYAS 439 MS+ I Sbjct: 616 KGEDLGSMSVSAFIERLK 633 >gi|239623178|ref|ZP_04666209.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239522545|gb|EEQ62411.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 643 Score = 266 bits (679), Expect = 6e-69, Method: Composition-based stats. Identities = 83/442 (18%), Positives = 148/442 (33%), Gaps = 39/442 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y + + RD +L L M + G +LP G + + RE R Sbjct: 238 NYLTMMEEAKKRDHRKLGKELGLF--MFAEEGPGFPFFLPKGMTLKNTLIDYWREIHQRE 295 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+S P + S LW SG +D Y M +++ P + ++++ S Sbjct: 296 GYQEVSTPIILSRKLWENSGHWDHYKDNMYT-TVIDEEDYAVKPMNCPGGMLVYKNQPHS 354 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ L R E + G+MR R F DA+ F + + Sbjct: 355 YRDLPLRVGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMRDDQIEDE-IKGVTRLINE 413 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ + G + + + P S E + DD+ Sbjct: 414 VYTQFGFEYF-VELSTRPEDSMGSDE-----------------DWEMATNGLKKALDDMG 455 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H L DSL + ++ F ++ L +A Sbjct: 456 LEYIVNEGDGAFYGPKIDFH---LRDSLGRTWQCGTIQLD----FQMPQRFDLEYTAE-- 506 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 K + + G++ ++ GK +W V I + + + Sbjct: 507 -DGSKKRPIMIHRVCFGSIERFIGILIEHFAGKFPVWLAPVQVKVIPV------SEKSME 559 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +Y +L G D E++G + A L P +++G K ++ + ++ R Sbjct: 560 YATGVYEKLKAAGIRTELDHKDEKVGYKIRQAQLEKVPYMLVLGEKEAAEGAITVRSRDK 619 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G LE+ I Sbjct: 620 GDLGAAVLEDFIADIKKMVEAK 641 >gi|303229391|ref|ZP_07316181.1| threonine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a] gi|302515927|gb|EFL57879.1| threonine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a] Length = 636 Score = 266 bits (679), Expect = 6e-69, Method: Composition-based stats. Identities = 79/441 (17%), Positives = 146/441 (33%), Gaps = 40/441 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L I + G +LP G + + RE + Sbjct: 233 YLHMLEEAAKRDHRKLGKELGLFV--IKEEGPGFPFFLPKGMALRNELENFWREVHHDFE 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW SG +D Y + M +D+ P + ++++ + SY Sbjct: 291 YDEIRTPIILNKHLWETSGHWDHYRENMYT-TIIDDEEYAIKPMNCPGGILVYQNEMHSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + ++ L R EL G+ R R F DA+ F L + + + Sbjct: 350 RDLPLRYAELGLVHRHELSGALHGLFRVRAFTQDDAHVFMLPEQMQSELMKVIELF---- 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 I ++ V T + + + Sbjct: 406 ---------------DRIYSQFGLKYHVELSTKPDNAMGDDAIWEAATEALRNAIEAKGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I A Y D H E DSL + +++ + + G Sbjct: 451 DYVINPGDGAFYGPKLDYHIE---DSLGRTWQCGTIQLDMNLP--------ERFNVEYIG 499 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H M I + +P +AP ++ ++ I + + Sbjct: 500 EDGQKHRTIMIHRACFGSMERFIGIL--TEHYAGAFPTWMAPVQVKVLPI---SEKHVEY 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ ++ V DD E+IG + A + P ++VG K + D+ V ++ Sbjct: 555 ANQLAKQMRHDYVRVEVDDRNEKIGYKIRQAQMEKVPYMLVVGDKEMEDNSVNVRKHGGD 614 Query: 425 IREDMSLEEVINYASHRFSNN 445 + +E N Sbjct: 615 ELGTVPFDEFFNSIKIEIKER 635 >gi|118595089|ref|ZP_01552436.1| Threonyl-tRNA synthetase, class IIa [Methylophilales bacterium HTCC2181] gi|118440867|gb|EAV47494.1| Threonyl-tRNA synthetase, class IIa [Methylophilales bacterium HTCC2181] Length = 635 Score = 266 bits (679), Expect = 6e-69, Method: Composition-based stats. Identities = 70/445 (15%), Positives = 146/445 (32%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y + + RD +L L + ++ G+ W P G V +R+ Sbjct: 228 LKEYLYRLEEAEKRDHRKLGKQLDLF--HMQDNAPGMVFWHPKGWSLWLAVEDYMRQMFK 285 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ PT+ LW +SG +++Y M ++ P + ++F + + Sbjct: 286 DYGYKEIKTPTIIDKSLWEKSGHWENYQDNMFT-TASENRVYAVKPMNCPGHVEVFNNTL 344 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+LP + R+E G+MR R F DA+ F T + K Sbjct: 345 HSYRDLPLRLAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFC-TEDQIKEEVMVFNDML 403 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + + G K I + + P S E D + + + Sbjct: 404 FKAYADFGFKDIVVMLSTRPEKRVGSDE-----------------VWDRAEEALESALKE 446 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 ++ A Y + L DSL + ++ G A Sbjct: 447 TGLSYTMQPGEGAFYGPKIEY---TLKDSLGRVWQCGTIQLDFNLPKRLG--------AE 495 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G+M ++ + G +W + +++ Sbjct: 496 YIDEDNSRKNPVMLHRAIVGSMERFIGILIEHYAGSLPLWLAPIQVVLLNI------SDA 549 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ++ + + + G D E+I + + P V++G + + + +V ++ Sbjct: 550 QKEYAKTLETIFKEKGIRCESDLRNEKITYKIREHSMQRIPYMVVLGDREMQEKQVTVRT 609 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 + M+++ I + + Sbjct: 610 QSGEDLGAMAIDAFIQHLNSDIEKK 634 >gi|225076640|ref|ZP_03719839.1| hypothetical protein NEIFLAOT_01690 [Neisseria flavescens NRL30031/H210] gi|224952046|gb|EEG33255.1| hypothetical protein NEIFLAOT_01690 [Neisseria flavescens NRL30031/H210] Length = 643 Score = 266 bits (679), Expect = 6e-69, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 161/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 237 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQVIEQHMRKELNVAG 294 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +++Y M + + P + IF + ++SY Sbjct: 295 YKEVKTPQIMDKTFWEKSGHWENYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 353 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 354 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVDEARAFN-ELLVRI 412 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S E A+ G + +P E Sbjct: 413 YKQFGFHDVAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACGVEWEELPGE--------- 463 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + ++A + Sbjct: 464 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LNAEYVT 504 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 505 ENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 558 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G V D E+IG + FP Q++VG K ++KV ++ R Sbjct: 559 YCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-RKA 617 Query: 424 GIREDMSLEEVINYASHRFSN 444 +++++ I ++ Sbjct: 618 EDLGSLNVDDFIAQLQQEITD 638 >gi|238018994|ref|ZP_04599420.1| hypothetical protein VEIDISOL_00856 [Veillonella dispar ATCC 17748] gi|237864478|gb|EEP65768.1| hypothetical protein VEIDISOL_00856 [Veillonella dispar ATCC 17748] Length = 636 Score = 266 bits (679), Expect = 7e-69, Method: Composition-based stats. Identities = 77/441 (17%), Positives = 144/441 (32%), Gaps = 40/441 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L I + G +LP G + + RE + Sbjct: 233 YLHLLEEAAKRDHRKLGKELGLFV--IKEEGPGFPFFLPKGMALRNELENFWREVHHEFD 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW SG + Y + M +D+ P + ++++ + SY Sbjct: 291 YEEIRTPIILNKQLWETSGHWFHYRENMYT-TIIDDEEYAIKPMNCPGGILVYQNEMHSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+ P + ++ L R EL G+ R R F DA+ F L + + + Sbjct: 350 RDFPLRYAELGLVHRHELSGALHGLFRVRAFTQDDAHVFMLPDQMQSELMKVIELF---- 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 I ++ V T + + + Sbjct: 406 ---------------DRIYSQFGLKYHVELSTKPDNAMGDDAIWEAATEALRNAIEAKGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I A Y D H E DSL + +++ + G Sbjct: 451 PYVINPGDGAFYGPKLDYHIE---DSLGRTWQCGTIQLDMNLP--------ERFQIEYVG 499 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H M I + +P +AP ++ ++ I + + Sbjct: 500 EDGQKHRPIMIHRACFGSMERFIGIL--TEHYAGAFPTWMAPVQVKILPI---SEKHVEY 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ ++ + V DD E+IG + A + P ++VG K V + V ++ Sbjct: 555 AKELAKQMHRDYVRVEVDDRSEKIGYKIRQAQMAKVPYMLVVGDKEVEEGTVNVRKHGGD 614 Query: 425 IREDMSLEEVINYASHRFSNN 445 + +E N Sbjct: 615 ELGSIPFDEFFNSIKIEIKER 635 >gi|326562407|gb|EGE12726.1| threonyl-tRNA synthetase [Moraxella catarrhalis 7169] gi|326569116|gb|EGE19178.1| threonyl-tRNA synthetase [Moraxella catarrhalis BC1] Length = 639 Score = 265 bits (678), Expect = 7e-69, Method: Composition-based stats. Identities = 82/447 (18%), Positives = 150/447 (33%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E RD L L + + + G+ W P G + +R+ Sbjct: 226 KQLKAYLQRLEEAEKRDHRKIGKALNLF--HMQEQAPGMVFWHPNGWTIWQVLEQYMRKV 283 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q G +E+ P + LW +SG +D+Y EM+ + P + +F Sbjct: 284 QKDNGYLEIKTPQIVDRSLWEKSGHWDNY-GEMMFTTASEKRDYAIKPMNCPCHVQVFNQ 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F + + + Sbjct: 343 GLKSYRDLPLRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTNAQIRQEA-LNFIK 401 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L ++ G I M+ + P + E D + Sbjct: 402 LTLDVYKDFGFDHIQMKLSTRPEKRVGADE-----------------LWDLAEQALADAL 444 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D+ + A Y + L D + + ++ F + + Sbjct: 445 DNAGLDWELQAGEGAFYGPKIEF---SLQDCIGRVWQCGTLQLD----FNLPER----LD 493 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A F G G+ + +G+ ++ + G W +++ Sbjct: 494 AEFVGESGERERPVMLHRAILGSFERFIGILIEHYAGLFPAWLAPQQVVVMNIT------ 547 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D+ + ++L+ G D E+IG + L P +I+G K V V + Sbjct: 548 DKQADSVGDVVSKLNAKGYRAISDLRNEKIGFKIRERTLERIPFMLILGDKEVESGTVNV 607 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R MSL++ I Sbjct: 608 RTRAGENLGSMSLDDFIAVLDKAIEKK 634 >gi|288576250|ref|ZP_05978464.2| threonine--tRNA ligase [Neisseria mucosa ATCC 25996] gi|288565905|gb|EFC87465.1| threonine--tRNA ligase [Neisseria mucosa ATCC 25996] Length = 643 Score = 265 bits (678), Expect = 7e-69, Method: Composition-based stats. Identities = 83/441 (18%), Positives = 159/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 237 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAG 294 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 295 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 353 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 354 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 412 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S + A+ G + +P E Sbjct: 413 YKQFGFHDVSVKLSLRPEKRAGSDDVWDKAEQGLRDALTACGVEWDELPGE--------- 463 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 464 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LDAEYVT 504 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 505 ENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 558 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G V D E+IG + FP Q++VG K ++KV ++ R Sbjct: 559 YCCEVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-RKA 617 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 618 EDLGSLDLDDFIARLQQEIAD 638 >gi|300311294|ref|YP_003775386.1| threonyl-tRNA synthetase [Herbaspirillum seropedicae SmR1] gi|300074079|gb|ADJ63478.1| threonyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1] Length = 635 Score = 265 bits (678), Expect = 8e-69, Method: Composition-based stats. Identities = 78/443 (17%), Positives = 148/443 (33%), Gaps = 39/443 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD L L + G+ W P G V +R Sbjct: 229 EAYLHMLEEAEKRDHRKLGRALDLF--HFQDEAPGLIFWHPKGWTIWQQVEQYMRRVYQD 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW ++G +++Y + M + ++A P + IF S + Sbjct: 287 NGYQEVKAPQILDRSLWEKTGHWENYRENMFT-TESENRAYALKPMNCPGHIQIFNSGLH 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + + R+E G+MR R F D + F T + + Sbjct: 346 SYRDLPLRYGEFGQCHRNEPSGALHGMMRVRGFTQDDGHIFC-TEDQIQEEVAAFNRVVR 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G K + ++ P + E D + Sbjct: 405 EVYDCFGFKEVAVKLALRPEKRIGAEE-----------------VWDKAENALREAIRAS 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 S + A Y + H L DS+ + + ++ G +Y Sbjct: 448 GSEWEELPGEGAFYGPKIEYH---LKDSIGRSWQCGTMQVDFSMPARLGAEY-------V 497 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + V + +G++ A++ +H G +W + + I Sbjct: 498 TEDNNRKVPVMLHRAIVGSLERFIAILIENHAGAMPLW------LAPTQVVILNISDAQA 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D + + L K G V D E+I + + P ++VG K + V ++ R Sbjct: 552 DYVQNVAQTLKKQGFRVETDLRNEKITYKIRQHSIQKPPYILVVGDKERDANTVAVRARG 611 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 MS++ ++ + Sbjct: 612 NVDLGVMSIDTLVERLKDEVAAK 634 >gi|295111615|emb|CBL28365.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Synergistetes bacterium SGP1] Length = 633 Score = 265 bits (678), Expect = 8e-69, Method: Composition-based stats. Identities = 84/441 (19%), Positives = 157/441 (35%), Gaps = 39/441 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L ++E RD +L L + +H+ G + P G ++ + R E R Sbjct: 227 KAYLKRMEEAKLRDHRKLGRELDLFS--LHEEGPGFPFFHPKGMVVMNTLIDFWRREHVR 284 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + +LW+ SG +D Y + M + ++K P + I+++ + Sbjct: 285 RGYQEVRTPQILDRELWLRSGHWDHYRENM-YFTEIDEKPFAIKPMNCPGGILIYKTQLH 343 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ + R E G+MR R F DA+ + P + + Sbjct: 344 SYRELPMRIGELGVVHRHERSGVLHGLMRVRCFTQDDAHLYCE-PSQIQQEVMGIMDLCR 402 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ + + + P S E + + Sbjct: 403 YVYSDVFGFKYAVELSTKPENAMGSTE-----------------QWEAAENGLRAALEQS 445 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + + E A Y D H E D + + ++ F ++ + A Sbjct: 446 NTPYRVNEGDGAFYGPKIDFHLE---DCIGRTWQCGTIQLD----FQMPERFDMHYIAE- 497 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + V + +G++ ++ + G W +AP + LI I + R Sbjct: 498 --DGKEHRPVMLHRTILGSLERFMGILIEHYAGAFPYW---IAPVQAELIPI---SEAHR 549 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 E++ L G D E++G + A L P +++G K + +V ++ R Sbjct: 550 AYAEELRKELMSWGVRTETDSRDEKLGKRIRDAQLQKVPYMIVIGDKERDERQVAVRERT 609 Query: 423 TGIREDMSLEEVINYASHRFS 443 G MSLE S F+ Sbjct: 610 KGDLGSMSLEAFQKLLSAEFN 630 >gi|269139162|ref|YP_003295863.1| threonyl-tRNA synthetase [Edwardsiella tarda EIB202] gi|267984823|gb|ACY84652.1| threonyl-tRNA synthetase [Edwardsiella tarda EIB202] gi|304559086|gb|ADM41750.1| Threonyl-tRNA synthetase [Edwardsiella tarda FL6-60] Length = 642 Score = 265 bits (678), Expect = 8e-69, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 142/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + A +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNSCIKMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D + Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------IWDRAEEDLAAALQENGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ F + S A++ G Sbjct: 451 PFEYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + V + +G+M ++ G W V +++ + Sbjct: 500 ENNERVVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQAVVMNIT------DSQAE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E++ +L G D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVEELSKKLQAAGIRAKSDLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 +S+++VI + Sbjct: 614 KDLGVISIDDVIEKLQQEIRSR 635 >gi|288574759|ref|ZP_06393116.1| threonyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570500|gb|EFC92057.1| threonyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 630 Score = 265 bits (678), Expect = 8e-69, Method: Composition-based stats. Identities = 82/440 (18%), Positives = 159/440 (36%), Gaps = 40/440 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + +H+ G + P G ++ + + + G Sbjct: 227 YVTRMEEAKKRDHRKIGRELGLFS--LHKEGPGFPFFHPKGMVVINTLIDFWSKVHRKNG 284 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 ++ P + + DLW++SG +D Y + M + +D+ P + +++S + SY Sbjct: 285 YDQIRTPMILNRDLWIQSGHWDHYRENM-YFTEIDDQPYAIKPMNCPGGILVYKSDLHSY 343 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ + R E G+MR R F DA+ + TP+ K + + I Sbjct: 344 RDLPLRLGELGIVHRHEKSGVLHGLMRVRCFTQDDAHHYC-TPDQIKDEVSLIMDMVDYI 402 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + + + P S E + S ++ + Sbjct: 403 YSEVFGFKFHVELSTRPDNSMGSDE-----------------MWELAEKSLREVLEERGT 445 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y D H E R + G I + T+ G Sbjct: 446 TYVLNPGDGAFYGPKIDFHLED----------CIGRTWQCGTI-QLDFQMPEKFDVTYIG 494 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +DGK+H + +G++ ++ + G W + + A D Sbjct: 495 SDGKEHRPAMLHRTILGSIERFLGILIEHYAGAFPFW------IAPVQVKVLAVGDDHVD 548 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + A L V D E++G + A + P ++VG K + V ++ R Sbjct: 549 YAKDLKALLQDREYRVELDCRDEKLGRKIRDAQMEKVPFMLVVGDKELETGTVSVRDRSE 608 Query: 424 GIREDMSLEEVINYASHRFS 443 G + MS E+++ +FS Sbjct: 609 GDKGSMSKEDLLELLKGQFS 628 >gi|237801015|ref|ZP_04589476.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023872|gb|EGI03929.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 640 Score = 265 bits (678), Expect = 8e-69, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 149/442 (33%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L I + RD +L L + + G+ W P G + +R+ Q G Sbjct: 231 YILRIEEAEKRDHRKIGKRLGLF--HTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG + +Y M + ++ P + +F +KSY Sbjct: 289 YLEIKTPQVVDRSLWEKSGHWANYADNMFT-TESENRDYAIKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+E G+MR R F DA+ F + S L + Sbjct: 348 RELPMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAES-AAFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K I ++ + P S E D + + D Sbjct: 407 YADFGFKDIELKLSTRPEKRVGSDE-----------------LWDRAESALASALDSAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ F + ++A + Sbjct: 450 PYDLQPGEGAFYGPKIEF---SLKDCLGRVWQCGTLQLD----FNLPIR----LNAEYVS 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ ++ +P +AP + ++NI D Sbjct: 499 EDNSRKNPVMLHRAILGSFERFIGILIEHYE---GAFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L++ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + + + S Sbjct: 613 ADLGSMPVAQFAEFLAQAVSRR 634 >gi|121535635|ref|ZP_01667441.1| threonyl-tRNA synthetase [Thermosinus carboxydivorans Nor1] gi|121305805|gb|EAX46741.1| threonyl-tRNA synthetase [Thermosinus carboxydivorans Nor1] Length = 513 Score = 265 bits (678), Expect = 8e-69, Method: Composition-based stats. Identities = 83/440 (18%), Positives = 151/440 (34%), Gaps = 42/440 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + I G + P G + + R+ + G Sbjct: 108 YLRMLEEAAKRDHRKLGRELDLFS--IQDEGPGFPFFHPKGMVIRNELENFWRKLHVKYG 165 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D Y + M + + P + ++R+ SY Sbjct: 166 YQEIKTPIILHQRLWQQSGHWDHYRENM-YFTTIDGEGYAVKPMNCPGGILVYRTQHHSY 224 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R EL G+MR R F DA+ F L P K + + + Sbjct: 225 RDLPLRTCELGLVHRHELSGALHGLMRVRSFTQDDAHIFML-PSQIKDEIQGVIDLFNEV 283 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + GL T + S + + + ++ Sbjct: 284 YSTFGLTY------------------HAELSTKPEKAMGSDEIWEVATNALREALEERGM 325 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D H L DS+ + +++ F T+ G Sbjct: 326 PYKINEGDGAFYGPKIDFH---LRDSIGRTWQCGTIQLDMLMPEKFD--------LTYVG 374 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ ++ + G W +AP ++ ++ I Sbjct: 375 EDGQKHRPVMIHRVAYGSLERFIGILIEHYAGAFPTW---LAPVQVKILPITDRH---VA 428 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ + V D E+IG + L P +IVG K V ++ R Sbjct: 429 YAQEVATLMRSKDIRVEVDSRNEKIGYKIREGQLEKVPYMLIVGDKETETRTVAVRKRGQ 488 Query: 424 GIREDMSLEEVINYASHRFS 443 G ++++ + Sbjct: 489 GDIGAQAVDDFVAAILAEIQ 508 >gi|254804601|ref|YP_003082822.1| Threonyl-tRNA synthetase [Neisseria meningitidis alpha14] gi|254668143|emb|CBA04768.1| Threonyl-tRNA synthetase [Neisseria meningitidis alpha14] Length = 637 Score = 265 bits (678), Expect = 8e-69, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 158/441 (35%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 231 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +++Y M + + P + IF + ++SY Sbjct: 289 YKEVKTPQIMDKTFWEKSGHWENYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 348 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S E A+ G + +P E Sbjct: 407 YKQFGFHDVAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACGVEWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 458 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LDAEYVT 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 499 ENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQLVIMNIT------ENQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q++VG K ++KV ++ R Sbjct: 553 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-RKA 611 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 612 EDLGSLDLDDFIAQLQQEITD 632 >gi|167746735|ref|ZP_02418862.1| hypothetical protein ANACAC_01447 [Anaerostipes caccae DSM 14662] gi|167653695|gb|EDR97824.1| hypothetical protein ANACAC_01447 [Anaerostipes caccae DSM 14662] Length = 644 Score = 265 bits (678), Expect = 9e-69, Method: Composition-based stats. Identities = 93/442 (21%), Positives = 160/442 (36%), Gaps = 41/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L M+ G +LP G + + RE N+ G Sbjct: 230 YLTMMEEAKKRDHRKLGKELGLF--MMRDEGPGFPFFLPNGMVLKNTLLDYWREIHNKAG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+S P + S LW SG +D Y + M +++ P + +++S +SY Sbjct: 288 YVEISSPIMLSRHLWETSGHWDHYQENMYT-TVIDEEDFAIKPMNCPGGVLVYQSEPRSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R E + G+MR R F DA+ F + + + ++ Sbjct: 347 RDLPLRMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMMPEQIKDE-IKGVAALIDQV 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K + + P S E + S + DD+ Sbjct: 406 YSLFGFKYH-VELSTRPEDSMGSDE-----------------DWEMATDSLRSALDDLGL 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H E DS+ + ++ F ++ L + G Sbjct: 448 DYVVNEGDGAFYGPKIDFHLE---DSIGRTWQCGTIQLD----FQLPLRFDLH----YTG 496 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + G++ ++ G W +AP ++ +I I D Sbjct: 497 ADGEKHRPIMIHRVAFGSIERFIGILIEHFAGAFPTW---LAPVQVKVIPISDKH---LD 550 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L G D E++G + A L P ++VG K + V ++ R Sbjct: 551 YGTKVLDALKAAGIRAEIDTRAEKMGYKIREAQLHKIPYMLVVGGKEEENQAVSVRSRFK 610 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G MSL++ I Sbjct: 611 GDEGQMSLDDFICAIRKEIETK 632 >gi|330943371|gb|EGH45740.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B] Length = 640 Score = 265 bits (678), Expect = 9e-69, Method: Composition-based stats. Identities = 81/442 (18%), Positives = 147/442 (33%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L I + RD +L L + + G+ W P G + +R+ Q G Sbjct: 231 YVLRIEEAEKRDHRKIGKRLGLF--HTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG + +Y M + + P + +F +KSY Sbjct: 289 YLEIKTPQVVDRSLWEKSGHWANYADNMFT-TESESRDYAIKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+E G+MR R F DA+ F + S L + Sbjct: 348 RELPMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAES-AAFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K I ++ + P S E D + + D Sbjct: 407 YADFGFKDIELKLSTRPEKRVGSDE-----------------LWDRAESALASALDSAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ F + S A + Sbjct: 450 PYDLQPGEGAFYGPKIEF---SLKDCLGRVWQCGTLQLD----FNLPIRLS----AEYVS 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ ++ +P +AP + ++NI D Sbjct: 499 EDNSRKNPVMLHRAILGSFERFIGILIEHYE---GAFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L++ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + + + S Sbjct: 613 ADLGSMPVAQFAEFLAQAVSRR 634 >gi|153855829|ref|ZP_01996815.1| hypothetical protein DORLON_02836 [Dorea longicatena DSM 13814] gi|149751870|gb|EDM61801.1| hypothetical protein DORLON_02836 [Dorea longicatena DSM 13814] Length = 645 Score = 265 bits (678), Expect = 9e-69, Method: Composition-based stats. Identities = 85/442 (19%), Positives = 163/442 (36%), Gaps = 42/442 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E R D +L L M+ + G +LP G + + RE + G Sbjct: 233 YLTMLEEAKRRDHRKLGKELGLF--MMCEEGPGFPFFLPKGMVLKNTLLDYWRELHKKAG 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+S P + S LW SG +D Y + M + + P + ++++ +SY Sbjct: 291 YVEVSTPIILSRHLWETSGHWDHYKENMYT-TQIDGEDFAIKPMNCPGGMLVYKAEPRSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 ++LP ++ L R E + G+MR R F DA+ F + + + + Sbjct: 350 KDLPLRVGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMMPEQIRDE-IKGVVALIDEV 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K + + P S E + +D+ Sbjct: 409 YQLFGFKY-HVELSTRPEDSMGSDE-----------------DWELATEGLRGALNDLGL 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H L DS+ + +++ ++ + G Sbjct: 451 DYVVNEGDGAFYGPKIDFH---LTDSIGRTWQCGTIQLDM----QLPQRF----ELEYTG 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + G++ ++ G W +AP ++ ++ I + Sbjct: 500 ADGEKHRPIMIHRVAFGSIERFIGILIEHFAGAFPTW---LAPVQVKVLPISDKH---LE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +K+ L+ G D E+IG + A + P ++VG+K ++ V ++ R Sbjct: 554 YGQKVLDTLNAAGIRAEIDTRAEKIGYKIREAQMQKIPYMLVVGAKEEEENLVSVRSRFA 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G SL+E + + + Sbjct: 614 GDEGQKSLDEFVASVTEEIATR 635 >gi|226311191|ref|YP_002771085.1| threonyl-tRNA synthetase [Brevibacillus brevis NBRC 100599] gi|226094139|dbj|BAH42581.1| threonyl-tRNA synthetase [Brevibacillus brevis NBRC 100599] Length = 637 Score = 265 bits (678), Expect = 9e-69, Method: Composition-based stats. Identities = 83/444 (18%), Positives = 157/444 (35%), Gaps = 41/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L M + + G+ +LP G + + R Q Sbjct: 233 EYLHFIEEAKKRDHRKLGKELGLF--MFSEEAPGMPFYLPKGFTVRNELEQFSRRLQQLA 290 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P L + LW ESG +D Y + M ++ ++ P + I+++ + S Sbjct: 291 QYTEVRSPFLMNERLWKESGHWDHYKENM-YFSEVDNATYALKPMNCPGHMLIYKNEMHS 349 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + + R E G++R R F DA+ F + + + + Sbjct: 350 YRDLPIRYSEFGQVHRHEYSGALNGMLRVRTFCQDDAHVFVRPDQIASEIKGMITLI--- 406 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I E+ V T S + + S T +++ Sbjct: 407 ----------------DSIYKVFGFEYSVALSTRPEDSMGSDELWEAAESSLKTVLEELG 450 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I + A Y D ++ D+L + ++ F K+ T+ Sbjct: 451 MAYEIKDGDGAFYGPKIDF---QITDALKRRHQCGTIQLD----FQMPEKFD----LTYV 499 Query: 304 GADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G D + H + G+M ++ + G IW I +V Sbjct: 500 GQDNEKHRPVVLHRAMYGSMERFIGILIEHYAGAFPIW------LTPIQARIMNISEVHM 553 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 E++ +L + G V D E+IG + A + P +++G K V+D + ++ R Sbjct: 554 PYAEQVREKLQQAGIRVELDGRNEKIGYKIREAQVEKIPYMLVIGEKEVADGTLSVRKRG 613 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 G M+++ + + + Sbjct: 614 VGDEGAMTVDAFVEKIRAEINEMK 637 >gi|254515029|ref|ZP_05127090.1| threonyl-tRNA synthetase [gamma proteobacterium NOR5-3] gi|219677272|gb|EED33637.1| threonyl-tRNA synthetase [gamma proteobacterium NOR5-3] Length = 645 Score = 265 bits (678), Expect = 9e-69, Method: Composition-based stats. Identities = 78/445 (17%), Positives = 138/445 (31%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y I + RD KL L + + G+ W P G + +RE+Q Sbjct: 228 LKQYLRRIEEAEKRDHRKIGKKLDLF--HTQEEAPGMVFWHPQGWTIYQVIEQYMREQQR 285 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P L LW +SG D +G +M L +++ P + +F + Sbjct: 286 AQDYQEIKTPQLVDMSLWEKSGHADKFGDDMFMLT-ADEREFAVKPMNCPCHVQVFNQGL 344 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP + R+E G+MR R F D + F + + Sbjct: 345 RSYRDLPLRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDGHIFCTEEQIQPE-VSTFIDFL 403 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G + R + P + E D + D Sbjct: 404 HAVYADFGFDEVIYRLSTRPAQRVGTDE-----------------DWDRAEKALADALDA 446 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y + L D + ++ ++ A Sbjct: 447 QGLDWQELPGEGAFYGPKIEF---SLKDCIGRVWQMGTIQVDFSMPGRLD--------AQ 495 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + DG + +G+ ++ + +G +W I++ + Sbjct: 496 YVAEDGSRKTPVMLHRAILGSFERFIGILIENFEGSFPVWLAPKQAVVINIT------EK 549 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + + L G VF D E+IG + + P V+VG K V V ++ Sbjct: 550 QDEYVRFVEDSLKNKGFRVFSDLRNEKIGFKIREHTIQRVPYLVVVGEKEVEAKTVAVRS 609 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R MSLE + Sbjct: 610 RNGEDLGTMSLEAFTEILDQDVARR 634 >gi|218709221|ref|YP_002416842.1| threonyl-tRNA synthetase [Vibrio splendidus LGP32] gi|218322240|emb|CAV18357.1| Threonyl-tRNA synthetase [Vibrio splendidus LGP32] Length = 655 Score = 265 bits (678), Expect = 9e-69, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 144/442 (32%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + + RD L L + Q + G+ W G + IR++ Sbjct: 247 LVRLEEAAKRDHRKIGKHLDLF--HMQQEAPGMVFWHHNGWTIFRELEVFIRQKLTEYDY 304 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y + M ++ P + IF +KSYR Sbjct: 305 QEVKGPLMMDRVLWERSGHWDKYAEAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYR 363 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + + Sbjct: 364 DLPLRMAEFGSCHRNEPSGALHGIMRVRGFTQDDAHVFC-TEDQVQQEVKACIEMVYDTY 422 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G ++I ++ + P S E D + + Sbjct: 423 TTFGFENIVVKLSTRPEQRVGSDE-----------------MWDRAEADLKQALEAMEIA 465 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y + L D L + ++ G AT+ G Sbjct: 466 YEIQEGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFALPERLG--------ATYVGE 514 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D + H + +G++ ++ + G W + + + Sbjct: 515 DNERHTPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAIVMGIT------DKQSEY 568 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++I +L K G V D E+IG + L P ++ G + + ++ ++ R Sbjct: 569 VQEIAKKLQKSGFRVKADLRNEKIGFKIREHTLKRVPFMLVCGDQEMEAGEIAVRTRKGK 628 Query: 425 IREDMSLEEVINYASHRFSNNR 446 +++ I+Y S+ + Sbjct: 629 DLGKFKVDDFISYIQAEVSSRK 650 >gi|78486008|ref|YP_391933.1| threonyl-tRNA synthetase [Thiomicrospira crunogena XCL-2] gi|123769059|sp|Q31F14|SYT_THICR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|78364294|gb|ABB42259.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Thiomicrospira crunogena XCL-2] Length = 642 Score = 265 bits (678), Expect = 9e-69, Method: Composition-based stats. Identities = 82/440 (18%), Positives = 156/440 (35%), Gaps = 39/440 (8%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +++E RD L L + + + G+ W P G V +R++ Sbjct: 231 YLRMMEEAEKRDHRKLGKSLDLF--HVDELAPGMAFWHPKGSTLYRVVENYMRQQLVEND 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D + M + ++ P + ++ ++ SY Sbjct: 289 YQEIRTPLIMDRTLWEKSGHWDKFKDNMFT-TETENRDYAVKPMNCPGHIQVYNHNLSSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + L R+E G+MR R F DA+ F TPE K Sbjct: 348 RDLPIRLAEFGLVHRNEPSGTLHGLMRVRSFTQDDAHIFC-TPEQIKEEVQACIDLVFNT 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G +I ++ + P D D + D Sbjct: 407 YADFGFDNIQVKFSTRPEQR-----------------VGEDDVWDLAEEALEQTLKDANL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ A Y + +L D + + ++ F ++A + G Sbjct: 450 EYALQPGEGAFYGPKIEF---QLKDCIGRVWQCGTIQLD------FSMTQEERLNAVYIG 500 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 AD + H+ + +G++ ++ ++GK W + + I + V + Sbjct: 501 ADNEKHHPVMIHRAILGSLERFVGILVEHYEGKFPTW------LAPTQLVIASIADVHNE 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +L K G V D E++G + L P ++VG + + + V ++ R Sbjct: 555 YVNDFAKKLKKHGFRVESDLRNEKVGFKIREHTLQRVPYILVVGDQEMENGTVNVRARGG 614 Query: 424 GIREDMSLEEVINYASHRFS 443 S EE+I++ S S Sbjct: 615 ENLGSFSFEELIDHLSEDVS 634 >gi|260774298|ref|ZP_05883213.1| threonyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14] gi|260611259|gb|EEX36463.1| threonyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14] Length = 642 Score = 265 bits (678), Expect = 9e-69, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 144/442 (32%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G ++ IR + Sbjct: 234 LTRLEEAAKRDHRKIGKQLDLF--HMQQEAPGMVFWHHNGWSIFRDLEVFIRHKLTEYDY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 292 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFC-TEDQIQQEVTSCIKMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + G ++I ++ + P S E D + D + Sbjct: 410 NTFGFENIAVKLSTRPEKRVGSDE-----------------IWDKSEEALKHSLDAMGIA 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y + L+D L + ++ G AT+ G Sbjct: 453 YEIQEGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLDFNLPSRLG--------ATYVGE 501 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + V + +G++ ++ + G W +++ D Sbjct: 502 SNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVVVNIT------DKQADY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ +L K G D E+IG + L P ++ G + + ++ ++ R Sbjct: 556 AQEVVQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTRKGK 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 L++ I + S+ + Sbjct: 616 DLGKFKLDDFITHIQAEVSSRQ 637 >gi|294792093|ref|ZP_06757241.1| threonine--tRNA ligase [Veillonella sp. 6_1_27] gi|294457323|gb|EFG25685.1| threonine--tRNA ligase [Veillonella sp. 6_1_27] Length = 641 Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats. Identities = 80/441 (18%), Positives = 145/441 (32%), Gaps = 40/441 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L I + G +LP G + + RE + Sbjct: 238 YLHLLEEAAKRDHRKLGKELGLFV--IKEEGPGFPFFLPKGMALRNELENFWREVHHDFD 295 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + S LW SG +D Y + M +D+ P + ++++ + SY Sbjct: 296 YEEIRTPIILSKHLWETSGHWDHYRENMYT-TIIDDEEYAIKPMNCPGGILVYQNEMHSY 354 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+ P + ++ L R EL G+ R R F DA+ F L + + + Sbjct: 355 RDFPLRYAELGLVHRHELSGALHGLFRVRAFTQDDAHVFMLPDQMQTELMKVIELF---- 410 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 I ++ V T + + + Sbjct: 411 ---------------DRIYSQFGLKYHVELSTKPDNAMGDDAIWEAATEALRNAIEAKGI 455 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I A Y D H E DSL + +++ + G Sbjct: 456 PYVINPGDGAFYGPKLDYHIE---DSLGRTWQCGTIQLDMNLP--------ERFQIEYIG 504 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H M I + +P +AP ++ ++ I + + Sbjct: 505 EDGQKHRPIMIHRACFGSMERFIGIL--TEHYAGAFPTWMAPVQVKILPI---SEKHVEY 559 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ ++ + V DD E+IG + A + P ++VG K V + V ++ Sbjct: 560 AKELAKQMHRDYVRVEVDDRSEKIGYKIRQAQMAKVPYMLVVGDKEVEEGTVNVRKHGGD 619 Query: 425 IREDMSLEEVINYASHRFSNN 445 + EE N Sbjct: 620 ELGSVPFEEFFNSIKIEIKER 640 >gi|149374489|ref|ZP_01892263.1| threonyl-tRNA synthetase [Marinobacter algicola DG893] gi|149361192|gb|EDM49642.1| threonyl-tRNA synthetase [Marinobacter algicola DG893] Length = 641 Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats. Identities = 85/444 (19%), Positives = 158/444 (35%), Gaps = 40/444 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L L+E RD KL L + + + G+ W P G + +R +Q++ Sbjct: 229 KAYLHRLEEAEKRDHRKIGKKLSLF--HMQEEAPGMVFWHPDGWSLYQEIEQYMRGKQHK 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + S LW +SG +D + +M + P + +F +K Sbjct: 287 HGYQEIKTPQVVSRALWEKSGHWDKFKDDMFT-TESEKHDYAIKPMNCPCHVQVFNQGLK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP + R+E G+MR R F DA+ F + + Sbjct: 346 SYKDLPLRLAEFGSCHRNEASGALHGLMRVRGFTQDDAHIFCEEDAIQQE-VSDFIGMLH 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 I+ G I + + P S E ++ + + +P E Sbjct: 405 EIYADFGFTEILYKLSTRPEKRVGSDEVWDKSEAALEEALNREGVDWELLPGE------- 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + L D + + ++ G +Y Sbjct: 458 ----------GAFYGPKIEF---SLKDCIGRVWQCGTIQVDFSMPGRLGAQY-------V 497 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + V + +G+ ++ ++G W +AP +I+++NI + R Sbjct: 498 ADNSERKTPVMLHRAVLGSFERFIGILIEEYEGAFPTW---LAPTQIAVLNITDN---QR 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D C+ + + +G V D E+IG + + P V++G K V ++ V ++ R Sbjct: 552 DYCQNLAKKWDSLGYRVNADLRNEKIGFKIREHTINKVPFLVVIGDKEVENNAVAVRTRK 611 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 +SLE + N + Sbjct: 612 GEDLGTLSLEAFEQLMADEI-NRK 634 >gi|325197939|gb|ADY93395.1| threonyl-tRNA synthetase [Neisseria meningitidis G2136] Length = 637 Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats. Identities = 83/441 (18%), Positives = 160/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 231 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 289 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 348 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S + A+ G + + +P E Sbjct: 407 YKQFGFHDVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 458 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LDAEYVT 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 499 ENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQLVIMNIT------ENQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G V D E+IG + FP Q++VG K ++KV ++ R Sbjct: 553 YCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-RKA 611 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 612 EDLGSLDLDDFIAQLQQEITD 632 >gi|308067332|ref|YP_003868937.1| Threonyl-tRNA synthetase 2 (threonine--tRNA ligase) (ThrRS) [Paenibacillus polymyxa E681] gi|305856611|gb|ADM68399.1| Threonyl-tRNA synthetase 2 (Threonine--tRNA ligase) (ThrRS) [Paenibacillus polymyxa E681] Length = 637 Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats. Identities = 84/442 (19%), Positives = 153/442 (34%), Gaps = 42/442 (9%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L M + + G+ +LP G + R+ Q G Sbjct: 235 LHLLEEAKKRDHRKLGKELELF--MFSEEAPGMPFYLPKGMVVRTALEDYSRDIQRLHGY 292 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + + LW +SG Y+ Y + M ++ ++ P + +F++ + SYR Sbjct: 293 EEVRTPLMMNNRLWEQSGHYEHYKENM-YFSEVDETTFALKPMNCPGHMLVFKNELHSYR 351 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R EL G+MR R F DA+ F TP + + ++ Sbjct: 352 DLPIRIAEFGQVHRHELSGALNGMMRVRTFCQDDAHIFV-TPGQIEQEITDVIKLINEMY 410 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +F V T D + D + Sbjct: 411 SVFG------------------FDFTVELSTRPDDFMGEPALWDQAEQALQNVLDHLGIN 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I A Y D H + D+L + + ++ F K+ T+ G Sbjct: 453 YRINAGDGAFYGPKIDFH---ILDALKRSWQCGTIQLD----FQMPEKFD----LTYVGE 501 Query: 306 DGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D + H + G++ ++ G +W V + + + + Sbjct: 502 DNQKHRPVVIHRAIYGSIDRFMGILTEHFTGAFPLWLAPVHAKLLPV------SENYIET 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +I L K G V D E++G + A L P ++G + V ++ R G Sbjct: 556 ANEIQDALLKAGLRVEVDTRNEKLGYKIREAQLEKVPYMFVIGENEKTTGTVAVRKRGEG 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 +S+ +++ S + Sbjct: 616 DLGSLSIADIVEKISTEIREKQ 637 >gi|86147528|ref|ZP_01065839.1| threonyl-tRNA synthetase [Vibrio sp. MED222] gi|85834696|gb|EAQ52843.1| threonyl-tRNA synthetase [Vibrio sp. MED222] Length = 642 Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 144/442 (32%), Gaps = 40/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + + RD L L + Q + G+ W G + IR++ Sbjct: 234 LVRLEEAAKRDHRKIGKHLDLF--HMQQEAPGMVFWHHNGWTIFRELEVFIRQKLTEYDY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y + M ++ P + IF +KSYR Sbjct: 292 QEVKGPLMMDRVLWERSGHWDKYAEAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + + Sbjct: 351 DLPLRMAEFGSCHRNEPSGALHGIMRVRGFTQDDAHVFC-TEDQVQQEVKACIEMVYDTY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G ++I ++ + P S E D + + Sbjct: 410 TTFGFENIVVKLSTRPEQRVGSDE-----------------MWDRAEADLKQALEAMEIA 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y + L D L + ++ G AT+ G Sbjct: 453 YEIQEGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFALPERLG--------ATYVGE 501 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D + H + +G++ ++ + G W + + + Sbjct: 502 DNERHTPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAIVMGIT------DKQSEY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++I +L K G V D E+IG + L P ++ G + + ++ ++ R Sbjct: 556 VQEIAKKLQKSGFRVKADLRNEKIGFKIREHTLKRVPFMLVCGDQEMEAGEIAVRTRKGK 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 +++ I+Y S+ + Sbjct: 616 DLGKFKVDDFISYIQAEVSSRK 637 >gi|313892956|ref|ZP_07826533.1| threonine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412] gi|313442309|gb|EFR60724.1| threonine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412] Length = 636 Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 144/441 (32%), Gaps = 40/441 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L I + G +LP G + + RE + Sbjct: 233 YLHLLEEAAKRDHRKLGKELGLFV--IKEEGPGFPFFLPKGMALRNELENFWREVHHEFD 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW SG + Y + M +D+ P + ++++ + SY Sbjct: 291 YEEIRTPIILNKQLWETSGHWFHYRENMYT-TIIDDEEYAIKPMNCPGGILVYQNEMHSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+ P + ++ L R EL G+ R R F DA+ F L + + + Sbjct: 350 RDFPLRYAELGLVHRHELSGALHGLFRVRAFTQDDAHVFMLPDQMQSELMKVIELF---- 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 I ++ V T + + + Sbjct: 406 ---------------DRIYSQFGLKYHVELSTKPDNAMGDDAIWEAATEALRNAIEAKGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I A Y D H E DSL + +++ + G Sbjct: 451 PYVINPGDGAFYGPKLDYHIE---DSLGRTWQCGTIQLDMNLP--------ERFQIDYVG 499 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H M I + +P +AP ++ ++ I + + Sbjct: 500 EDGQKHRPIMIHRACFGSMERFIGIL--TEHYAGAFPTWMAPVQVKILPI---SEKHVEY 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ ++ + V DD E+IG + A + P ++VG K V + V ++ Sbjct: 555 AKELAKQMHRDYVRVEVDDRSEKIGYKIRQAQMAKVPYMLVVGDKEVEEGTVNVRKHGGD 614 Query: 425 IREDMSLEEVINYASHRFSNN 445 + EE N Sbjct: 615 ELGSVPFEEFFNSIKIEIKER 635 >gi|326572997|gb|EGE22976.1| threonyl-tRNA synthetase [Moraxella catarrhalis CO72] Length = 639 Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats. Identities = 82/447 (18%), Positives = 150/447 (33%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E RD L L + + + G+ W P G + +R+ Sbjct: 226 KQLKAYLQRLEEAEKRDHRKIGKALNLF--HMQEQAPGMVFWHPNGWTIWQVLEQYMRKV 283 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q G +E+ P + LW +SG +D+Y EM+ + P + +F Sbjct: 284 QKDNGYLEIKTPQIVDRSLWEKSGHWDNY-GEMMFTTASEKRDYAIKPMNCPCHVQVFNQ 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F + + + Sbjct: 343 GLKSYRDLPLRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTNAQIRQEA-LNFIK 401 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L ++ G I M+ + P + E D + Sbjct: 402 LTLDVYKDFGFDHIQMKLSTRPEKRVGADE-----------------LWDLAEQALADAL 444 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D+ + A Y + L D + + ++ F + + Sbjct: 445 DNAGLDWELQAGEGAFYGPKIEF---SLQDCIGRVWQCGTLQLD----FNLPER----LD 493 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A F G G+ + +G+ ++ + G W +++ Sbjct: 494 AEFVGESGERERPVMLHRAILGSFERFIGILIEHYAGLFPAWLAPQQVVVMNIT------ 547 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D+ + ++L+ G D E+IG + L P +I+G K V V + Sbjct: 548 DKQADSVGDVVSKLNAKGYRAISDLRNEKIGFKIRERTLERIPFMLILGDKEVESGTVNV 607 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R MSL++ I Sbjct: 608 RTRTGDNLGSMSLDDFIAVLDKAIEKK 634 >gi|169831543|ref|YP_001717525.1| threonyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C] gi|169638387|gb|ACA59893.1| threonyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C] Length = 635 Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats. Identities = 83/445 (18%), Positives = 157/445 (35%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++ + + RD +L L + H+ G + P G + + REE Sbjct: 227 LKEHLFRLEEAKRRDHRRLGFELDLFS--FHEAGPGFPFFHPRGMVLRNELERFWREEHT 284 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G +E+ P + +LW SG +D Y + M +D+ P + ++RS + Sbjct: 285 KNGYLEIRTPIILRQELWERSGHWDHYRENM-YFTTIDDEKYAVKPMNCPGGILVYRSKL 343 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR LP ++ L R EL G+MR+R F DA+ F PE + ++ Sbjct: 344 HSYRELPIRLGELGLVHRHELSGVLHGLMRARCFTQDDAHIFCR-PEQVEEEIVRIMDLT 402 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ + + P S E + + ++ Sbjct: 403 EYFYRQVFGFDYHVELSTRPEKSLGSDE-----------------IWESATAALRRALEE 445 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D H L D L + ++ F K+ Sbjct: 446 RAVNYKVNEGDGAFYGPKVDFH---LRDCLGRTWQCGTIQVD----FQMPEKF----ELE 494 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G DG+ H + G+M A++ + +P +AP ++ ++ I Sbjct: 495 YVGEDGQRHRPVMIHRVIYGSMERFIAILT---EHFAGAFPVWLAPVQVRILPITDRHA- 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 +++ L + G +D E++G + A +L P +++G + V ++H Sbjct: 551 --AYAQEVTEALLRAGVRAEFDGRNEKVGYKIREAQVLKVPYMLVIGDREAESRTVAVRH 608 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R G M L + Sbjct: 609 RTAGDLGSMELNDFTGRLVREIGTR 633 >gi|262275836|ref|ZP_06053645.1| threonyl-tRNA synthetase [Grimontia hollisae CIP 101886] gi|262219644|gb|EEY70960.1| threonyl-tRNA synthetase [Grimontia hollisae CIP 101886] Length = 642 Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats. Identities = 72/441 (16%), Positives = 139/441 (31%), Gaps = 40/441 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + Q + G+ W G + A +R + Sbjct: 233 LQRLEEAAKRDHRKLGKQLDLY--HMQQEAPGMVFWHHNGWVVFRELEAFVRSKLAEYNY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 291 QEVKGPLIMDRVLWERSGHWDKYADYMFT-TQSENREYALKPMNCPGHVQIFNQGLKSYR 349 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F + + + Sbjct: 350 DLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTPEQVQQE-VTSCIKMVYDTY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G + I ++ + P S D + + + Sbjct: 409 KTFGFEDIVVKLSTRPEMR-----------------VGSDAMWDRAEKALAEALESMNIQ 451 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I+E A Y + L D L + ++ G AT+ G Sbjct: 452 FEILEGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFALPERLG--------ATYVGE 500 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D + H + +G++ ++ + G W +++ + Sbjct: 501 DNERHTPVMIHRAILGSLERFIGILIEEYAGHFPSWLAPQQAVVMNIT------DNQAEY 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ +L K G D E+IG + L P ++ G + + ++ ++ R Sbjct: 555 VQEVAKKLQKAGFRASADLRNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTRKGK 614 Query: 425 IREDMSLEEVINYASHRFSNN 445 ++E I+ + Sbjct: 615 DLGKYKIDEFISLLENEIRTR 635 >gi|303230749|ref|ZP_07317496.1| threonine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6] gi|302514509|gb|EFL56504.1| threonine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6] Length = 636 Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats. Identities = 79/441 (17%), Positives = 145/441 (32%), Gaps = 40/441 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L I + G +LP G + + RE + Sbjct: 233 YLHMLEEAAKRDHRKLGKELGLFV--IKEEGPGFPFFLPKGMALRNELENFWREVHHDFE 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW SG +D Y + M +D+ P + ++++ + SY Sbjct: 291 YDEIRTPIILNKHLWETSGHWDHYRENMYT-TIIDDEEYAIKPMNCPGGILVYQNEMHSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + ++ L R EL G+ R R F DA+ F L + + + Sbjct: 350 RDLPLRYAELGLVHRHELSGALHGLFRVRAFTQDDAHVFMLPEQMQSELMKVIELF---- 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 I ++ V T + + + Sbjct: 406 ---------------DRIYSQFGLKYHVELSTKPDNAMGDDAIWEAATEALRNAIEAKGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I A Y D H E DSL + +++ + + G Sbjct: 451 DYVINPGDGAFYGPKLDYHIE---DSLGRTWQCGTIQLDMNLP--------ERFNVEYIG 499 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H M I + +P +AP ++ ++ I + Sbjct: 500 EDGQKHRTIMIHRACFGSMERFIGIL--TEHYAGAFPTWMAPVQVKVLPI---SEKHVKY 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ ++ V DD E+IG + A + P ++VG K + D+ V ++ Sbjct: 555 ANQLAKQMRHDYVRVEVDDRNEKIGYKIRQAQMEKVPYMLVVGDKEMEDNSVNVRKHGGD 614 Query: 425 IREDMSLEEVINYASHRFSNN 445 + +E N Sbjct: 615 ELGTVPFDEFFNSIKIEIKER 635 >gi|119476522|ref|ZP_01616873.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2143] gi|119450386|gb|EAW31621.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2143] Length = 645 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 87/444 (19%), Positives = 153/444 (34%), Gaps = 41/444 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L L+E RD K L + + + G+ W P G + + +RE+Q Sbjct: 229 KAYLHRLEEAEKRDHRKLGKKYDLF--HMQEEAPGMVFWHPKGWSIYTTIESYMREQQTL 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P L LW +SG D +G +M L + + + P + IF +K Sbjct: 287 NNYQEIKTPQLVDFSLWQKSGHADKFGDDMFTL-EADGRDFAIKPMNCPCHVQIFNQGLK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F+ DA+ F T + + Sbjct: 346 SYRDLPLRLAEFGSCHRNEPSGSLHGIMRVRGFVQDDAHIF-ATENQIQPEVSVFIDFLH 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G + R + P + E A+ SK +P E Sbjct: 405 SVYEDFGFSDVIYRLSTRPEQRVGTDESWDKAEKALADALNSKGLPWEELPGE------- 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + L D + ++ ++ A + Sbjct: 458 ----------GAFYGPKIEF---SLKDCIGRVWQLGTIQVDFSMPGRLD--------AQY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 DG + +G+ ++ ++G W +AP ++ + NI Sbjct: 497 VAEDGSRQTPVMLHRAILGSFERFIGILIEHYEGAFPTW---LAPTQVVIANITDK---Q 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +K++ L G V D E+IG + + P ++VG K + + V ++ R Sbjct: 551 APYVKKVHQSLKNSGIRVDADLRNEKIGFKIREHIIQKVPYLLVVGDKEIENQTVAVRAR 610 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 MSLE + + Sbjct: 611 NGEDLGSMSLEAFEQILNEDVARR 634 >gi|171058428|ref|YP_001790777.1| threonyl-tRNA synthetase [Leptothrix cholodnii SP-6] gi|238689097|sp|B1XYZ3|SYT_LEPCP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|170775873|gb|ACB34012.1| threonyl-tRNA synthetase [Leptothrix cholodnii SP-6] Length = 637 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 84/442 (19%), Positives = 148/442 (33%), Gaps = 40/442 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 KY + + + RD +L L I +H+ G+ W P G V +R Sbjct: 234 KYLVMLEEAEKRDHRKLGRELDLF--HIDEHAPGVVFWHPKGWTVWQQVEQYMRRVYRDN 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + LW ++G +D Y M + + P + IF+ IKS Sbjct: 292 GYQEVKGPQILDKGLWEKTGHWDKYRDNMFT-TESEKRDYALKPMNCPGHILIFKQGIKS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + + R+E G+MR R F D + F + + Sbjct: 351 YRDLPLRYGEFGQCHRNEPSGGLHGIMRVRGFTQDDGHIFCTEDQILPECDAFTT-LLQK 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G I + + P S E D + + Sbjct: 410 VYADFGFTEILYKVATRPEKRIGSDE-----------------LWDKAEAALIASLRNSG 452 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I A Y + L D+L + + ++ F + + A + Sbjct: 453 CEFEISPGEGAFYGPKVEY---TLKDALGRHWQCGTIQVD----FSLPER----LDAEYV 501 Query: 304 GADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G+ H V + +G++ ++ + P +AP ++S++NI Sbjct: 502 AESGERLHPVMLHRAILGSLERFIGILI---EEHAGALPFWLAPTQVSVLNITDG---QA 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D + L K G V D E+I + L P ++VG K + V ++ R Sbjct: 556 DYARDVARSLQKQGLRVALDLRNEKITYKIREHSLQKVPYLIVVGDKERASGAVAVRARG 615 Query: 423 TGIREDMSLEEVINYASHRFSN 444 M+LE + + Sbjct: 616 NQDLGVMALEAFSQKLAAELAT 637 >gi|93353957|gb|ABF08046.1| threonyl-tRNA synthetase [Cupriavidus metallidurans CH34] Length = 663 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 147/442 (33%), Gaps = 41/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD L L + + + G+ W P G + V +R + G Sbjct: 259 YLHMLEEAEKRDHRRLGKTLDLF--HLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLGQAG 316 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW SG +D+Y + M + + + P + IF ++SY Sbjct: 317 YEEVRTPQVMDRSLWERSGHWDNYKENMF-VTESEKRDYAIKPMNCPGHVQIFNHGLRSY 375 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + + I Sbjct: 376 RDLPLRLAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEEQIVEEA-KAFNELAFSI 434 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K + ++ P S A+ G + +P E Sbjct: 435 YDDFGFKDVAVKLSLRPEKRAGSDAVWDHAEDGLRLALRACGVEWEELPGE--------- 485 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D++ + + +++ G A + Sbjct: 486 --------GAFYGPKVEYH---IKDAIGRSWQCGTLQLDLVLPERLG--------AEYVS 526 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ +H G W +++ + + Sbjct: 527 EDNSRKRPVMLHRAILGSFERFLGILLENHAGALPAWLAPEQVVVMNIA------ESQSE 580 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E + L K G D E+I + L P +++G K ++V ++ R Sbjct: 581 YAENVVQLLQKQGFRAKADLRNEKITYKIREHSLQKIPYLLVIGDKERDANQVAVRARGN 640 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + S+ Sbjct: 641 VDLGVMPVSAFVERLQQDVSSK 662 >gi|332971649|gb|EGK10599.1| threonine--tRNA ligase [Kingella kingae ATCC 23330] Length = 637 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 81/440 (18%), Positives = 156/440 (35%), Gaps = 41/440 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R E G Sbjct: 232 YITRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPRGWALWQVIEQHMRRELTEAG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG + +Y M L + P + IF ++SY Sbjct: 290 YQEVKTPQVMDKTFWEKSGHWANYKDNMF-LTSSEKREYAVKPMNCPGHVQIFNHGLRSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + ++ + ++I Sbjct: 349 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIAEETKAFNL-LVMKI 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G K++ ++ P S E A+ G + +P E Sbjct: 408 YQQFGFKNVSIKLSLRPEKRAGSEEIWDKAEQGLRDALTACGVEWEELPGE--------- 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 459 --------GAFYGPKVEYH---IKDALGRSWQCGTIQLD----FVLPER----LEAEYVA 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G++ ++ H G +W V +++ + D Sbjct: 500 EDNTKKRPVMLHRAILGSLERFIGILIEEHAGSFPLWLAPVQMVVMNIT------EKQAD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ A+L G V D E+IG + + +P Q+ VG K + + +V I+ + Sbjct: 554 YAKEVQAKLQAAGFRVDLDIRNEKIGYKIRSNSEMRYPYQLTVGDKEMENGQVSIRKKAD 613 Query: 424 GIREDMSLEEVINYASHRFS 443 +S++E I Sbjct: 614 N-LGSVSVDEFIAMLQDELK 632 >gi|298369384|ref|ZP_06980702.1| threonine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314] gi|298283387|gb|EFI24874.1| threonine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314] Length = 648 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 162/442 (36%), Gaps = 41/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E + G Sbjct: 242 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPRGWALWQTIEQHMRKELDAAG 299 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 300 YREVKTPQIMDKAFWEKSGHWDNYKDNMF-VTQSEKREYAVKPMNCPGHVQIFNNSLRSY 358 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + + +RI Sbjct: 359 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVDEA-RRFNELLVRI 417 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S + A+ G + +P E Sbjct: 418 YKQFGFHDVAVKLSLRPEKRAGSDDIWDKAEQGLRDALTACGVEWEELPGE--------- 468 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D++ + + ++ F + + A + Sbjct: 469 --------GAFYGPKIEYH---VKDAIGRSWQCGTLQLD----FVLPDR----LDAEYVT 509 Query: 305 A-DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G+ V + +G++ ++ +H G +W V +++ + D Sbjct: 510 ESNGRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQMVVMNIT------EHQTD 563 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ RL V D E+IG + FP Q++VG K ++KV ++ R Sbjct: 564 YCRQVVERLQAENFRVELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-RKA 622 Query: 424 GIREDMSLEEVINYASHRFSNN 445 +++++ I+ + + Sbjct: 623 EDLGSLNIDDFISQLKQEIAES 644 >gi|161621305|ref|YP_583315.2| threonyl-tRNA synthetase [Cupriavidus metallidurans CH34] Length = 635 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 147/442 (33%), Gaps = 41/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD L L + + + G+ W P G + V +R + G Sbjct: 231 YLHMLEEAEKRDHRRLGKTLDLF--HLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLGQAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW SG +D+Y + M + + + P + IF ++SY Sbjct: 289 YEEVRTPQVMDRSLWERSGHWDNYKENMF-VTESEKRDYAIKPMNCPGHVQIFNHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + + I Sbjct: 348 RDLPLRLAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEEQIVEEA-KAFNELAFSI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K + ++ P S A+ G + +P E Sbjct: 407 YDDFGFKDVAVKLSLRPEKRAGSDAVWDHAEDGLRLALRACGVEWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D++ + + +++ G A + Sbjct: 458 --------GAFYGPKVEYH---IKDAIGRSWQCGTLQLDLVLPERLG--------AEYVS 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ +H G W +++ + + Sbjct: 499 EDNSRKRPVMLHRAILGSFERFLGILLENHAGALPAWLAPEQVVVMNIA------ESQSE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E + L K G D E+I + L P +++G K ++V ++ R Sbjct: 553 YAENVVQLLQKQGFRAKADLRNEKITYKIREHSLQKIPYLLVIGDKERDANQVAVRARGN 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + S+ Sbjct: 613 VDLGVMPVSAFVERLQQDVSSK 634 >gi|297250596|ref|ZP_06864620.2| threonine--tRNA ligase [Neisseria polysaccharea ATCC 43768] gi|296838509|gb|EFH22447.1| threonine--tRNA ligase [Neisseria polysaccharea ATCC 43768] Length = 648 Score = 265 bits (676), Expect = 2e-68, Method: Composition-based stats. Identities = 79/441 (17%), Positives = 162/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 242 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAG 299 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +++Y M + + P + IF + ++SY Sbjct: 300 YKEVKTPQIMDKTFWEKSGHWENYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 358 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 359 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 417 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S + A+ G + + +P E Sbjct: 418 YKQFGFHDVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 468 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + ++A + Sbjct: 469 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LNAEYVT 509 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W + +++ + D Sbjct: 510 ENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPIQMVIMNIT------ENQAD 563 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G V D E+IG + FP Q++VG K ++KV ++ R Sbjct: 564 YCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-RKA 622 Query: 424 GIREDMSLEEVINYASHRFSN 444 +++++ + ++ Sbjct: 623 EDLGSLNVDDFVAQLQQEITD 643 >gi|66045402|ref|YP_235243.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a] gi|75502334|sp|Q4ZUG7|SYT_PSEU2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|63256109|gb|AAY37205.1| Threonyl-tRNA synthetase, class IIa [Pseudomonas syringae pv. syringae B728a] Length = 640 Score = 265 bits (676), Expect = 2e-68, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 146/442 (33%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRKIGKRLGLF--HTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG + +Y M + + P + +F +KSY Sbjct: 289 YLEIKTPQVVDRSLWEKSGHWANYADNMFT-TESESRDYAIKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+E G+MR R F DA+ F + S L + Sbjct: 348 RELPMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAES-AAFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K I ++ + P S E D + + D Sbjct: 407 YADFGFKDIELKLSTRPEKRVGSDE-----------------LWDRAESALASALDSAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ F + S A + Sbjct: 450 PYDLQPGEGAFYGPKIEF---SLKDCLGRVWQCGTLQLD----FNLPIRLS----AEYVS 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ ++ +P +AP + ++NI D Sbjct: 499 EDNSRKNPVMLHRAILGSFERFIGILIEHYE---GAFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L++ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + + + S Sbjct: 613 ADLGSMPVAQFAEFLAQAVSRR 634 >gi|289623636|ref|ZP_06456590.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647146|ref|ZP_06478489.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 2250] gi|298486701|ref|ZP_07004758.1| Threonyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158784|gb|EFH99847.1| Threonyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330867695|gb|EGH02404.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 640 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 81/442 (18%), Positives = 148/442 (33%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRKIGKRLGLF--HTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG + +Y M + + P + +F +KSY Sbjct: 289 YLEIKTPQVVDRSLWEKSGHWANYADNMFT-TESESRDYAIKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+E G+MR R F DA+ F + S L + Sbjct: 348 RELPMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAES-AAFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K I ++ + P S E A+T + + D Sbjct: 407 YADFGFKDIELKLSTRPEKRVGSDELWDRAET-----------------ALASALDSAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ F + S A + Sbjct: 450 PYDLQPGEGAFYGPKIEF---SLKDCLGRVWQCGTLQLD----FNLPIRLS----AEYVS 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ ++ +P +AP + ++NI D Sbjct: 499 EDNSRKNPVMLHRAILGSFERFIGILIEHYE---GAFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L++ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + + + S Sbjct: 613 ADLGSMPVAQFAEFLAQAVSRR 634 >gi|330973951|gb|EGH74017.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 640 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 146/442 (33%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRKIGKRLGLF--HTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG + +Y M + + P + +F +KSY Sbjct: 289 YLEIKTPQVVDRSLWEKSGHWANYADNMFT-TESESRDYAIKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+E G+MR R F DA+ F + S L + Sbjct: 348 RELPMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAES-AAFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K I ++ + P S E D + + D Sbjct: 407 YADFGFKDIELKLSTRPEKRVGSDE-----------------LWDRAESALASALDSAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ F + S A + Sbjct: 450 PYDLQPGEGAFYGPKIEF---SLKDCLGRVWQCGTLQLD----FNLPIRLS----AEYVS 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ ++ +P +AP + ++NI D Sbjct: 499 EDNSRKNPVMLHRAILGSFERFIGILIEHYE---GAFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L++ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + + + S Sbjct: 613 ADLGSMPVAQFAEFLAQAVSRR 634 >gi|330989241|gb|EGH87344.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 640 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 81/442 (18%), Positives = 148/442 (33%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRKIGKRLGLF--HTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG + +Y M + + P + +F +KSY Sbjct: 289 YLEIKTPQVVDRSLWEKSGHWANYADNMFT-TESESRDYAIKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+E G+MR R F DA+ F + S L + Sbjct: 348 RELPMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAES-AAFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K I ++ + P S E A+T + + D Sbjct: 407 YADFGFKDIELKLSTRPEKRVGSDELWDRAET-----------------ALASALDSAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ F + S A + Sbjct: 450 PYDLQPGEGAFYGPKIEF---SLKDCLGRVWQCGTLQLD----FNLPIRLS----AEYVS 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ ++ +P +AP + ++NI D Sbjct: 499 EDNSRKNPVMLHRAILGSFERFIGILIEHYE---GAFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L++ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + + + S Sbjct: 613 ADLGSMPVAQFAEFLAQAVSRR 634 >gi|320324302|gb|EFW80381.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. B076] gi|320328576|gb|EFW84578.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race 4] gi|330885566|gb|EGH19715.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race 4] Length = 640 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 81/442 (18%), Positives = 148/442 (33%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRKIGKRLGLF--HTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG + +Y M + + P + +F +KSY Sbjct: 289 YLEIKTPQVVDRSLWEKSGHWANYADNMFT-TESESRDYAIKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+E G+MR R F DA+ F + S L + Sbjct: 348 RELPMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAES-AAFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K I ++ + P S E A+T + + D Sbjct: 407 YADFGFKDIELKLSTRPEKRVGSDELWDRAET-----------------ALASALDSAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ F + S A + Sbjct: 450 PYDLQPGEGAFYGPKIEF---SLKDCLGRVWQCGTLQLD----FNLPIRLS----AEYVS 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ ++ +P +AP + ++NI D Sbjct: 499 EDNSRKNPVMLHRAILGSFERFIGILIEHYE---GAFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L++ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + + + S Sbjct: 613 ADLGSMPVAQFAEFLAQAVSRR 634 >gi|239998484|ref|ZP_04718408.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae 35/02] gi|240125235|ref|ZP_04738121.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] gi|317163762|gb|ADV07303.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107] Length = 648 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 159/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 242 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWRTIEQHMRKELNAAG 299 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 300 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 358 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 359 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 417 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + +R P S + A+ G + + +P E Sbjct: 418 YKQFGFHDVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 468 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 469 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LDAEYVT 509 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 510 ENNDRARPVMLHRAILGSLERFVGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 563 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q+++G K ++KV ++ R Sbjct: 564 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVR-RKA 622 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 623 EDLGSLDLDDFIAQLQQEITD 643 >gi|254481727|ref|ZP_05094970.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2148] gi|214037856|gb|EEB78520.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2148] Length = 640 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 80/445 (17%), Positives = 143/445 (32%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y I + RD KL L + + G+ W P G + +RE Q Sbjct: 228 LKQYLNRIEEAEKRDHRKIGKKLDLF--HTQEEAPGMVFWHPAGWSIYQTIEQYMREGQQ 285 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P L LW +SG D +G +M L D+ P + +F + Sbjct: 286 QHDYQEIKTPQLVDLSLWKKSGHADKFGDDMFMLK-AEDREFAVKPMNCPCHVQVFNQGL 344 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F+ DA+ F + + Sbjct: 345 KSYRDLPLRLAEFGSCHRNEPSGSLHGIMRVRGFVQDDAHIFCTEEQIQPE-VSSFIDFL 403 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G + R + P S D + + Sbjct: 404 HSVYEDFGFADVIYRLSTRPEQR-----------------VGSDQDWDRAEKALADALNA 446 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y + L D + ++ ++ A Sbjct: 447 QDLPWETLPGEGAFYGPKIEF---SLKDCIGRVWQLGTIQVDFSMPGRLD--------AQ 495 Query: 302 FKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + DG V + +G+ ++ ++G W +AP + ++NI Sbjct: 496 YVAEDGSRQVPVMLHRAILGSFERFIGILIEHYEGIFPTW---LAPTQAVVLNITDK--- 549 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + + + L G V D E+IG + + P ++VG K V + ++ Sbjct: 550 QSEYAKSVEDSLKNKGFRVISDLRNEKIGFKIREHTIQKVPYLLVVGDKEVESQTLAVRA 609 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R M LE + + + Sbjct: 610 RRGEDLGSMDLEAFETHLADDVARR 634 >gi|91776355|ref|YP_546111.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methylobacillus flagellatus KT] gi|123254150|sp|Q1GZR7|SYT_METFK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|91710342|gb|ABE50270.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methylobacillus flagellatus KT] Length = 635 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 83/442 (18%), Positives = 143/442 (32%), Gaps = 41/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L + + G+ W P G V +R G Sbjct: 231 YLHMLEEAEKRDHRKLGRQLDFF--HMQDEAPGMVFWHPRGWVIWQEVEQYMRNMFREFG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ PT+ +W +SG + +Y M ++ P + IF S + SY Sbjct: 289 YQEVRTPTIMDRVMWEKSGHWQNYHDNMFT-TASENRDYAVKPMNCPGHIQIFNSTLHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F T + K V + Sbjct: 348 RDLPLRLAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFC-TEDQVKDEVADFIVMLYKA 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + ++ + P + E D + Sbjct: 407 YKDFGFNEVLVKLSTRPEKRVGTDE-----------------AWDKAEEALAVALRQNNL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L DSL + ++ G A + Sbjct: 450 DFELQPGEGAFYGPKIEF---TLKDSLGRLWQCGTIQLDFNLPERLG--------AEYVD 498 Query: 305 ADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + H V + +G+M ++ + P +AP + ++NI D Sbjct: 499 EDNSRKHPVMLHRAIVGSMERFLGILI---ENYAGAMPAWLAPVQAMVLNISDG---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + A L K G V D E+I + L P +I G + + +V ++ R Sbjct: 553 YVSSVVAELRKNGFRVDSDLRNEKITYKIREHSLQKLPYLLIAGEREMQTGQVAVRTRKG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M L I ++ Sbjct: 613 EDLGSMPLSAFIERLKSDVADK 634 >gi|293399557|ref|ZP_06643710.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae F62] gi|291610126|gb|EFF39248.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae F62] Length = 648 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 159/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 242 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWRTIEQHMRKELNAAG 299 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 300 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 358 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 359 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 417 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + +R P S + A+ G + + +P E Sbjct: 418 YKQFGFHDVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 468 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 469 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LDAEYVT 509 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 510 ENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 563 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q+++G K ++KV ++ R Sbjct: 564 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVR-RKA 622 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 623 EDLGSLDLDDFIAQLQQEITD 643 >gi|257486172|ref|ZP_05640213.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331010502|gb|EGH90558.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 640 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 81/442 (18%), Positives = 148/442 (33%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRKIGKRLGLF--HTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG + +Y M + + P + +F +KSY Sbjct: 289 YLEIKTPQVVDRSLWEKSGHWANYADNMFT-TESESRDYAIKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+E G+MR R F DA+ F + S L + Sbjct: 348 RELPMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAES-AAFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K I ++ + P S E A+T + + D Sbjct: 407 YADFGFKDIELKLSTRPEKRVGSDELWDRAET-----------------ALASALDSAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ F + S A + Sbjct: 450 PYDLQPGEGAFYGPKIEF---SLKDCLGRVWQCGTLQLD----FNLPIRLS----AEYVS 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ ++ +P +AP + ++NI D Sbjct: 499 EDNSRKNPVMLHRAILGSFERFIGILIEHYE---GAFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L++ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + + + S Sbjct: 613 ADLGSMPVAQFAEFLAQAVSRR 634 >gi|240122983|ref|ZP_04735939.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae PID332] Length = 648 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 159/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 242 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAG 299 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 300 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 358 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 359 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 417 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + +R P S + A+ G + + +P E Sbjct: 418 YKQFGFHDVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 468 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 469 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LDAEYVT 509 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 510 ENNDRARPVMLHRAILGSLERFVGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 563 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q+++G K ++KV ++ R Sbjct: 564 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVR-RKA 622 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 623 EDLGSLDLDDFIAQLQQEITD 643 >gi|218767842|ref|YP_002342354.1| putative threonyl-tRNA synthetase [Neisseria meningitidis Z2491] gi|22654142|sp|Q9JVA3|SYT_NEIMA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|121051850|emb|CAM08156.1| putative threonyl-tRNA synthetase [Neisseria meningitidis Z2491] Length = 637 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 160/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 231 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +++Y M + + P + IF + ++SY Sbjct: 289 YKEVKTPQIMDKTFWEKSGHWENYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 348 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S + A+ G + + +P E Sbjct: 407 YKQFGFHDVSVKLSLRPEQRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 458 --------GAFYGPKIEYH---VRDALGRSWQCGTLQLD----FVLPER----LDAEYVT 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 499 ENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQLVIMNIT------ENQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G V D E+IG + FP Q++VG K ++KV ++ R Sbjct: 553 YCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-RKA 611 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 612 EDLGSLDLDDFIAQLQQEITD 632 >gi|28869575|ref|NP_792194.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000] gi|213970495|ref|ZP_03398622.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1] gi|301384174|ref|ZP_07232592.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13] gi|302132643|ref|ZP_07258633.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|38258312|sp|Q883H9|SYT_PSESM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|28852817|gb|AAO55889.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000] gi|213924666|gb|EEB58234.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1] gi|330876789|gb|EGH10938.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|331016139|gb|EGH96195.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 640 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 145/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRKIGKRLGLF--HTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG + +Y M + P + +F +KSY Sbjct: 289 YLEIKTPQVVDRSLWEKSGHWANYADNMFT-TQSESRDYAIKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+E G+MR R F DA+ F + S L + Sbjct: 348 RELPLRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAES-AAFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K I ++ + P S E D + + D Sbjct: 407 YADFGFKDIELKLSTRPEKRVGSDE-----------------LWDRAESALASALDSAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ F + S A + Sbjct: 450 PYDLQPGEGAFYGPKIEF---SLKDCLGRVWQCGTLQLD----FNLPIRLS----AEYVS 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ ++ +P +AP + ++NI D Sbjct: 499 EDNSRKNPVMLHRAILGSFERFIGILIEHYE---GAFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L++ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + + + S Sbjct: 613 ADLGSMPVAQFAEFLAQAVSRR 634 >gi|330967298|gb|EGH67558.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 640 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 145/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRKIGKRLGLF--HTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG + +Y M + P + +F +KSY Sbjct: 289 YLEIKTPQVVDRSLWEKSGHWANYADNMFT-TQSESRDYAIKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+E G+MR R F DA+ F + S L + Sbjct: 348 RELPLRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAES-AAFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K I ++ + P S E D + + D Sbjct: 407 YADFGFKDIELKLSTRPEKRVGSDE-----------------LWDRAESALASALDSAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ F + S A + Sbjct: 450 PYDLQPGEGAFYGPKIEF---SLKDCLGRVWQCGTLQLD----FNLPIRLS----AEYVS 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ ++ +P +AP + ++NI D Sbjct: 499 EDNSRKNPVMLHRAILGSFERFIGILIEHYE---GAFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L++ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + + + S Sbjct: 613 ADLGSMPVAQFAEFLAQAVSRR 634 >gi|330958898|gb|EGH59158.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 640 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 146/442 (33%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRKIGKRLGLF--HTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG + +Y M + + P + +F +KSY Sbjct: 289 YLEIKTPQVVDRSLWEKSGHWANYADNMFT-TESESRDYAIKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+E G+MR R F DA+ F + S L + Sbjct: 348 RELPMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAES-AAFIKLTLAV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K I ++ + P S E D + + D Sbjct: 407 YADFGFKDIELKLSTRPEKRVGSDE-----------------LWDRAESALASALDSAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ F + S A + Sbjct: 450 PYDLQPGEGAFYGPKIEF---SLKDCLGRVWQCGTLQLD----FNLPIRLS----AEYVS 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ ++ +P +AP + ++NI D Sbjct: 499 EDNSRKNPVMLHRAILGSFERFIGILIEHYE---GAFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L++ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + + + S Sbjct: 613 ADLGSMPVAQFAEFLAQAVSRR 634 >gi|302187613|ref|ZP_07264286.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642] Length = 640 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 146/442 (33%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRKIGKRLGLF--HTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG + +Y M + + P + +F +KSY Sbjct: 289 YLEIKTPQVVDRSLWEKSGHWANYADNMFT-TESESRDYAIKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+E G+MR R F DA+ F + S L + Sbjct: 348 RELPMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAES-AAFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K I ++ + P S E D + + D Sbjct: 407 YADFGFKDIELKLSTRPEKRVGSDE-----------------LWDRAESALASALDSAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ F + S A + Sbjct: 450 PYDLQPGEGAFYGPKIEF---SLKDCLGRVWQCGTLQLD----FNLPIRLS----AEYVS 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ ++ +P +AP + ++NI D Sbjct: 499 EDNSRKNPVMLHRAILGSFERFIGILIEHYE---GAFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L++ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + + + S Sbjct: 613 ADLGSMPVAQFAEFLAQAVSRR 634 >gi|320529200|ref|ZP_08030292.1| threonyl-tRNA synthetase [Selenomonas artemidis F0399] gi|320138830|gb|EFW30720.1| threonyl-tRNA synthetase [Selenomonas artemidis F0399] Length = 639 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 84/444 (18%), Positives = 159/444 (35%), Gaps = 42/444 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + +H+ G + P G + + RE R G Sbjct: 233 YLHMLEEAEKRDHRKLGRELDLFS--LHEEGPGFPFFHPNGMILRNELLNYWREVHRRYG 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+S P + S LW SG + Y + M +++ P + ++RS + SY Sbjct: 291 YSEISTPVILSRKLWETSGHWFHYRENMYT-TQIDEEDYAIKPMNCPGCMLVYRSQLHSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R EL G+ R R F DA+ +TPE + + + Sbjct: 350 RDLPLRLAELGLVHRHELSGALHGLFRVRNFTQDDAH-LFVTPEQIEGEIQHTIDLFDEV 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + GL + P S E + ++ Sbjct: 409 YRTFGLSYK-AELSTRPDDSMGSDE-----------------MWELATSGLQKALENRGL 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H L DS+ + +++ F T+ G Sbjct: 451 DYIVNEGDGAFYGPKIDFH---LRDSIGRTWQCGTIQLDMSLPEKFD--------LTYVG 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ ++ + +P + P ++ ++ I + + Sbjct: 500 EDGEKHRPVMLHRVVYGSIERFIGILI---ENFAGAFPVWMTPVQVRILPIT---ERHAE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E++ R+ G V D+ E+ G + + + P ++VG + V ++ Sbjct: 554 YAEELRKRMFDRGIRVEVDNRNEKTGYKIRESQVKKTPYTLVVGDQEQESGTVALRKYGE 613 Query: 424 GIREDMSLEEVINYASHRFSNNRP 447 MS ++ I + + + P Sbjct: 614 KDSTVMSADDFIAFVEKKIAERSP 637 >gi|268681605|ref|ZP_06148467.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID332] gi|268621889|gb|EEZ54289.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID332] Length = 637 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 159/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 231 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 289 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 348 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + +R P S + A+ G + + +P E Sbjct: 407 YKQFGFHDVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 458 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LDAEYVT 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 499 ENNDRARPVMLHRAILGSLERFVGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q+++G K ++KV ++ R Sbjct: 553 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVR-RKA 611 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 612 EDLGSLDLDDFIAQLQQEITD 632 >gi|194098020|ref|YP_002001068.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945] gi|193933310|gb|ACF29134.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945] Length = 648 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 159/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 242 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAG 299 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 300 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 358 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 359 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 417 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + +R P S + A+ G + + +P E Sbjct: 418 YKQFGFHDVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 468 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 469 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LDAEYVT 509 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 510 ENNDRARPVMLHRAILGSLERFVGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 563 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q+++G K ++KV ++ R Sbjct: 564 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVR-RKA 622 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 623 EDLGSLDLDDFIAQLQQEITD 643 >gi|268683833|ref|ZP_06150695.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] gi|268624117|gb|EEZ56517.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] Length = 637 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 159/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 231 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWRTIEQHMRKELNAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 289 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 348 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + +R P S + A+ G + + +P E Sbjct: 407 YKQFGFHDVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 458 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LDAEYVT 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 499 ENNDRARPVMLHRAILGSLERFVGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q+++G K ++KV ++ R Sbjct: 553 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVR-RKA 611 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 612 EDLGSLDLDDFIAQLQQEITD 632 >gi|254674303|emb|CBA10087.1| Threonyl-tRNA synthetase [Neisseria meningitidis alpha275] Length = 637 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 81/441 (18%), Positives = 160/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 231 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +++Y M + + P + IF + ++SY Sbjct: 289 YKEVKTPQIMDKTFWEKSGHWENYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 348 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S + A+ G + + +P E Sbjct: 407 YKQFGFHDVSVKLSLRPEQRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 458 --------GAFYGPKIEYH---VRDALGRSWQCGTLQLD----FVLPER----LDAEYVT 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ ++ G +W V +++ + D Sbjct: 499 ENNDRARPVMLHRAILGSLERFIGILIENYAGSFPLWLAPVQLVIMNIT------ENQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G V D E+IG + FP Q++VG K ++KV ++ R Sbjct: 553 YCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-RKA 611 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 612 EDLGSLDLDDFIAQLQQEITD 632 >gi|329904275|ref|ZP_08273747.1| Threonyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] gi|327548052|gb|EGF32784.1| Threonyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] Length = 635 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 77/444 (17%), Positives = 145/444 (32%), Gaps = 41/444 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD L L + + G+ W P G V +R Sbjct: 229 EAYLHMLEEADKRDHRKLGRLLDLF--HFQEEAPGMIFWHPKGWSVWQQVEQYMRRVYQD 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW +SG +++Y + M + ++ P + IFRS ++ Sbjct: 287 NGYQEVKAPQILDISLWEKSGHWENYKENMFT-TESEKRSYALKPMNCPGHVQIFRSDMR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + + R+E G+MR R F D + F + + Sbjct: 346 SYRDLPLRYGEFGQCHRNEPSGSLHGIMRVRGFTQDDGHIFCTEDQILEECVAYT-ALLH 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +++ G +I + + P S E D + T + Sbjct: 405 KVYADFGFANITYKVATRPEKRVGSEE-----------------AWDKAENALITSLERS 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I A Y + L D++ + ++ G A + Sbjct: 448 GCEFEISPGEGAFYGPKIEY---TLTDAIGRAWQCGTMQVDFSMPIRLG--------AEY 496 Query: 303 KGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D V + +G+ ++ ++ G +W V +++ + Sbjct: 497 VAEDNSRKVPVMLHRAILGSFERFIGMLLENYSGALPMWLAPVQVVVLNI------SEGQ 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D + L K G V D E+I + + P ++VG K + V ++ R Sbjct: 551 SDYARSVTQSLKKQGFRVESDLRNEKITFKIREHSVQKVPYIIVVGDKERDAATVAVRAR 610 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 M + +I + Sbjct: 611 GNADLGTMPISNLIARLLADVAEK 634 >gi|59800743|ref|YP_207455.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090] gi|73919809|sp|Q5F9U4|SYT_NEIG1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|59717638|gb|AAW89043.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090] Length = 637 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 159/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 231 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 289 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 348 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + +R P S + A+ G + + +P E Sbjct: 407 YKQFGFHDVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 458 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LDAEYVT 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 499 ENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q+++G K ++KV ++ R Sbjct: 553 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVR-RKA 611 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 612 EDLGSLDLDDFIAQLQQEITD 632 >gi|166032032|ref|ZP_02234861.1| hypothetical protein DORFOR_01734 [Dorea formicigenerans ATCC 27755] gi|166028485|gb|EDR47242.1| hypothetical protein DORFOR_01734 [Dorea formicigenerans ATCC 27755] Length = 643 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 83/443 (18%), Positives = 156/443 (35%), Gaps = 41/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L M+ + G +LP G + + RE + Sbjct: 229 EYLTMLEEAKKRDHRKLGKELGLF--MMCEEGPGFPFFLPKGMVLKNTLLDYWRELHKKA 286 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G +E+S P + S LW SG +D Y + M + + P + ++++ +S Sbjct: 287 GYVEVSTPIILSRHLWETSGHWDHYKENMYT-TQIDGEDYAIKPMNCPGGMLVYKAEPRS 345 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 Y++LP ++ L R E + G+MR R F DA+ F + + + Sbjct: 346 YKDLPLRVGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMMPEQIRDE-IKGVVALIDE 404 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G K + + P + E + +D+ Sbjct: 405 VYSLFGFKYH-VELSTRPENSMGTDE-----------------DWELATEGLRGALNDLG 446 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H L DS+ + +++ ++ + Sbjct: 447 LDYVVNEGDGAFYGPKIDFH---LTDSIGRTWQCGTIQLDM----QLPQRF----ELEYT 495 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 GADG+ H + G++ ++ G W +AP ++ ++ I Sbjct: 496 GADGEKHRPIMIHRVAFGSIERFIGILIEHFAGAFPTW---LAPVQVKVLPISDK---YM 549 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D K+ L+ G D E+IG + A + P ++VG K V ++ R Sbjct: 550 DYANKVLDELNAAGVRAEVDSRAEKIGYKIREAQMQKIPYMLVVGEKEQEADLVSVRSRF 609 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 G +LE I ++ Sbjct: 610 AGDEGQKNLETFIADIQKEIADR 632 >gi|261392911|emb|CAX50492.1| threonyl-tRNA synthetase (threonine--tRNA ligase; ThrRS) [Neisseria meningitidis 8013] gi|325203807|gb|ADY99260.1| threonyl-tRNA synthetase [Neisseria meningitidis M01-240355] Length = 637 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 81/441 (18%), Positives = 160/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 231 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +++Y M + + P + IF + ++SY Sbjct: 289 YKEVKTPQIMDKTFWEKSGHWENYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 348 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S + A+ G + + +P E Sbjct: 407 YKQFGFHDVSVKLSLRPEQRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 458 --------GAFYGPKIEYH---VRDALGRSWQCGTLQLD----FVLPER----LDAEYVT 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ ++ G +W V +++ + D Sbjct: 499 ENNDRARPVMLHRAILGSLERFIGILIENYAGSFPLWLAPVQLVIMNIT------ENQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G V D E+IG + FP Q++VG K ++KV ++ R Sbjct: 553 YCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-RKA 611 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 612 EDLGSLDLDDFIAQLQQEITD 632 >gi|240013609|ref|ZP_04720522.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae DGI18] gi|240112403|ref|ZP_04726893.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae MS11] gi|240120679|ref|ZP_04733641.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1] Length = 648 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 159/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 242 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAG 299 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 300 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 358 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 359 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 417 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + +R P S + A+ G + + +P E Sbjct: 418 YKQFGFHDVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 468 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 469 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LDAEYVT 509 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 510 ENNDRARPVMLHRAILGSLERFVGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 563 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q+++G K ++KV ++ R Sbjct: 564 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVR-RKA 622 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 623 EDLGSLDLDDFIAQLQQEITD 643 >gi|71735831|ref|YP_274354.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A] gi|123747652|sp|Q48JS3|SYT_PSE14 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|71556384|gb|AAZ35595.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 640 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 81/442 (18%), Positives = 148/442 (33%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRKIGKRLGLF--HTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG + +Y M + + P + +F +KSY Sbjct: 289 YLEIKTPQVVDRSLWEKSGHWANYADNMFT-TESESRDYAIKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+E G+MR R F DA+ F + S L + Sbjct: 348 RELPMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAES-AAFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K I ++ + P S E A+T + + D Sbjct: 407 YADFGFKDIELKLSTRPEKRVGSDELWERAET-----------------ALASALDSAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ F + S A + Sbjct: 450 PYDLQPGEGAFYGPKIEF---SLKDCLGRVWQCGTLQLD----FNLPIRLS----AEYVS 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ ++ +P +AP + ++NI D Sbjct: 499 EDNSRKNPVMLHRAILGSFERFIGILIEHYE---GAFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L++ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + + + S Sbjct: 613 ADLGSMPVAQFAEFLAQAVSRR 634 >gi|296135845|ref|YP_003643087.1| threonyl-tRNA synthetase [Thiomonas intermedia K12] gi|295795967|gb|ADG30757.1| threonyl-tRNA synthetase [Thiomonas intermedia K12] Length = 639 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 143/442 (32%), Gaps = 41/442 (9%) Query: 7 FLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L + RD +L L + + G+ W P G V +R+ +G Sbjct: 231 YLHALAEAEKRDHRKLGKELDLF--HFQEEAPGLAFWHPKGWALWQAVEQYMRQVYRDSG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW SG +D+Y + M + + P + IF S ++SY Sbjct: 289 YQEVKGPQILDVSLWKRSGHWDNYSENMF-FTESEKRQFAVKPMNCPGHIQIFNSGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F T + + +++ Sbjct: 348 RDLPIRYGEFGSCHRNEPSGALHGLLRVRGFTQDDGHIFC-TEDQIEAEVTAFHQQAMQV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P + D + Sbjct: 407 YTDFGFTDIALKIALRPEKR-----------------IGEEAVWDKAEAALRAALQACGV 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + H + DS+ +V ++ + A + Sbjct: 450 AWQELPGEGAFYGPKIEYH---MKDSIGRAWQVGTMQVDF--------MMPERLDAEYVD 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+M V+ + G +W V +++ D Sbjct: 499 EHSQRVRPVMLHRAIVGSMERFIGVLIEHYAGAMPLWLAPVQTVVMNIT------DAQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + L+K G V D E+I + L P ++VG + + ++ R Sbjct: 553 YARSVAQALTKQGFRVELDLRNEKINYKIRENALSKVPYLLVVGDQERDAGTIAVRARGN 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 +SLE + S + Sbjct: 613 VNLGVLSLEALTQKLSQEVQSR 634 >gi|294793964|ref|ZP_06759101.1| threonine--tRNA ligase [Veillonella sp. 3_1_44] gi|294455534|gb|EFG23906.1| threonine--tRNA ligase [Veillonella sp. 3_1_44] Length = 636 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 77/441 (17%), Positives = 143/441 (32%), Gaps = 40/441 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L I + G +LP G + + RE + Sbjct: 233 YLHMLEEAAKRDHRKLGKELGLFV--IKEEGPGFPFFLPKGMALRNELENFWREVHHEFE 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW SG + Y + M +++ P + ++++ + SY Sbjct: 291 YEEIRTPIILNKQLWETSGHWFHYRENMYT-TIIDEEEYAIKPMNCPGGILVYQNEMHSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+ P + ++ L R EL G+ R R F DA+ F L + + + Sbjct: 350 RDFPLRYAELGLVHRHELSGALHGLFRVRAFTQDDAHVFMLPSQMQSELMKVIELF---- 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 I ++ V T + + + Sbjct: 406 ---------------DRIYSQFGLKYHVELSTKPDNAMGDDAIWEAATEALRNAIEAKGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I A Y D H E DSL + +++ + G Sbjct: 451 PYVINPGDGAFYGPKLDYHIE---DSLGRTWQCGTIQLDMNLP--------ERFQIEYVG 499 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H M I + +P +AP ++ ++ I + + Sbjct: 500 EDGQKHRPIMIHRACFGSMERFIGIL--TEHYAGAFPTWMAPVQVKILPI---SEKHVEY 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + ++ + V DD E+IG + A + P ++VG K V + V ++ Sbjct: 555 AKDLAKQMHRDYVRVEVDDRSEKIGYKIRQAQMAKVPYMLVVGDKEVEEGTVNVRKHGGD 614 Query: 425 IREDMSLEEVINYASHRFSNN 445 + EE N Sbjct: 615 ELGSVPFEEFFNSIKTEIKER 635 >gi|269798232|ref|YP_003312132.1| threonyl-tRNA synthetase [Veillonella parvula DSM 2008] gi|269094861|gb|ACZ24852.1| threonyl-tRNA synthetase [Veillonella parvula DSM 2008] Length = 636 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 77/441 (17%), Positives = 143/441 (32%), Gaps = 40/441 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L I + G +LP G + + RE + Sbjct: 233 YLHMLEEAAKRDHRKLGKELGLFV--IKEEGPGFPFFLPKGMALRNELENFWREVHHEFE 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW SG + Y + M +++ P + ++++ + SY Sbjct: 291 YEEIRTPIILNKQLWETSGHWFHYRENMYT-TIIDEEEYAIKPMNCPGGILVYQNEMHSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+ P + ++ L R EL G+ R R F DA+ F L + + + Sbjct: 350 RDFPLRYAELGLVHRHELSGALHGLFRVRAFTQDDAHVFMLPSQMQSELMKVIELF---- 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 I ++ V T + + + Sbjct: 406 ---------------DRIYSQFGLKYHVELSTKPDNAMGDDAIWEAATEALRNAIEAKGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I A Y D H E DSL + +++ + G Sbjct: 451 PYVINPGDGAFYGPKLDYHIE---DSLGRTWQCGTIQLDMNLP--------ERFQIEYVG 499 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H M I + +P +AP ++ ++ I + + Sbjct: 500 EDGQKHRPIMIHRACFGSMERFIGIL--TEHYAGAFPTWMAPVQVKILPI---SEKHVEY 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + ++ + V DD E+IG + A + P ++VG K V + V ++ Sbjct: 555 AKDLAKQMHRDYVRVEVDDRSEKIGYKIRQAQMAKVPYMLVVGDKEVEEGTVNVRKHGGD 614 Query: 425 IREDMSLEEVINYASHRFSNN 445 + EE N Sbjct: 615 ELGSVPFEEFFNSIKTEIKER 635 >gi|160936998|ref|ZP_02084362.1| hypothetical protein CLOBOL_01887 [Clostridium bolteae ATCC BAA-613] gi|158440188|gb|EDP17935.1| hypothetical protein CLOBOL_01887 [Clostridium bolteae ATCC BAA-613] Length = 636 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 148/441 (33%), Gaps = 39/441 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L M + G +LP G + + RE R G Sbjct: 232 YLTMMEEAKKRDHRKLGKELGLF--MFAEEGPGFPFFLPKGMTLKNTLIDYWREIHYRDG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+S P + S LW SG +D Y M +++ P + ++++ SY Sbjct: 290 YQEVSTPIILSRKLWENSGHWDHYKDNMYT-TVIDEEDYAVKPMNCPGGMLVYKNQPHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R E + G+MR R F DA+ F + + + + Sbjct: 349 RDLPLKVGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMRDDQI-EDQIKGVTKLINEV 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + + + P S E + +D+ Sbjct: 408 YTQFGFEYF-VELSTRPEDSMGSDE-----------------DWEMATNGLRKALEDMGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H L DSL + ++ F ++ L +A Sbjct: 450 DYIVNEGDGAFYGPKIDFH---LRDSLGRTWQCGTIQLD----FQMPQRFDLEYTAE--- 499 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 K + + G++ ++ GK +W V I + + D Sbjct: 500 DGSKKRPIMIHRVCFGSIERFIGILIEHFAGKFPVWLAPVQVKVIPV------SEKSMDY 553 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +Y +L G D E++G + A L P +++G K ++ + ++ R G Sbjct: 554 ATGVYEKLKAAGIRTELDHKDEKVGYKIRQAQLEKVPYMLVLGEKEAAEGAITVRSRDKG 613 Query: 425 IREDMSLEEVINYASHRFSNN 445 L+ I Sbjct: 614 DLGAAGLDAFIEDIKKMIQTK 634 >gi|240016048|ref|ZP_04722588.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae FA6140] Length = 648 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 81/441 (18%), Positives = 159/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 242 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAG 299 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 300 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 358 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 359 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 417 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + +R P S + A+ G + + +P E Sbjct: 418 YKQFGFHDVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 468 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 469 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LDAEYVT 509 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ ++ G +W V +++ + D Sbjct: 510 ENNDRARPVMLHRAILGSLERFVGILIENYAGSFPLWLAPVQMVIMNIT------ENQAD 563 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q+++G K ++KV ++ R Sbjct: 564 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVR-RKA 622 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 623 EDLGSLDLDDFIAQLQQEITD 643 >gi|325127774|gb|EGC50682.1| threonyl-tRNA synthetase [Neisseria meningitidis N1568] Length = 637 Score = 264 bits (674), Expect = 3e-68, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 160/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 231 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 289 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 348 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S + A+ G + + +P E Sbjct: 407 YKQFGFHDVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + ++A + Sbjct: 458 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LNAEYVT 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 499 ENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQLVIMNIT------ENQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q++VG K ++KV ++ R Sbjct: 553 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-RKA 611 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 612 EDLGSLDLDDFIAQLQQEITD 632 >gi|326570601|gb|EGE20637.1| threonyl-tRNA synthetase [Moraxella catarrhalis BC7] Length = 639 Score = 264 bits (674), Expect = 3e-68, Method: Composition-based stats. Identities = 81/447 (18%), Positives = 151/447 (33%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E RD L L + + + G+ W P G + +R+ Sbjct: 226 KQLKAYLQRLEEAEKRDHRKIGKALNLF--HMQEQAPGMVFWHPNGWTIWQVLEQYMRKV 283 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q G +E+ P + LW +SG +D+Y EM+ + P + +F Sbjct: 284 QKDNGYLEIKTPQIVDRSLWEKSGHWDNY-GEMMFTTASEKRDYAIKPMNCPCHVQVFNQ 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F + + + Sbjct: 343 GLKSYRDLPLRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTNAQIRQEA-LNFIK 401 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L ++ G I M+ + P + E D + Sbjct: 402 LTLDVYKDFGFDHIQMKLSTRPEKRVGADE-----------------LWDLAEQALADAL 444 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D+ + A Y + L D + + ++ F + ++ Sbjct: 445 DNAGLDWELQAGEGAFYGPKIEF---SLQDCIGRVWQCGTLQLD----FNLPER----LN 493 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A F G G+ + +G+ ++ + G W +++ Sbjct: 494 AEFVGESGERERPVMLHRAILGSFERFIGILIEHYAGLFPAWLAPQQVVVMNIT------ 547 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D+ + ++L+ G D E+IG + L P +I+G K V V + Sbjct: 548 DKQADSVGDVVSKLNAKGYRAISDLRNEKIGFKIRERTLERIPFMLILGDKEVESGTVNV 607 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R M+L++ I Sbjct: 608 RTRTGENLGSMNLDDFIAVLDKAIEKK 634 >gi|268594343|ref|ZP_06128510.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae 35/02] gi|268547732|gb|EEZ43150.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae 35/02] Length = 638 Score = 264 bits (674), Expect = 3e-68, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 159/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 232 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWRTIEQHMRKELNAAG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 290 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 349 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + +R P S + A+ G + + +P E Sbjct: 408 YKQFGFHDVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 459 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LDAEYVT 499 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 500 ENNDRARPVMLHRAILGSLERFVGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q+++G K ++KV ++ R Sbjct: 554 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVR-RKA 612 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 613 EDLGSLDLDDFIAQLQQEITD 633 >gi|220934623|ref|YP_002513522.1| threonyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7] gi|259516780|sp|B8GRI1|SYT_THISH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|219995933|gb|ACL72535.1| threonyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7] Length = 643 Score = 264 bits (674), Expect = 3e-68, Method: Composition-based stats. Identities = 70/442 (15%), Positives = 144/442 (32%), Gaps = 38/442 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y + + RD +L L + I + G+ W P G + + + R Sbjct: 231 YLHRLAEAERRDHRRIGTELNLFS--IQEDAGGGLVFWHPKGARIRRAIEQFWFDMHERA 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + + DLW SG D Y + M + +++A P + +++ + S Sbjct: 289 GYQFLYTPHIANLDLWKTSGHADFYSESMYEPMEDDNQAFQLKPMNCPFHVLVYKDRLHS 348 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + ++ +R E+ G+MR R F DA+ F + + ++ L Sbjct: 349 YRDLPLRWAEMGTVYRREMSGALHGLMRVRGFTQDDAHIFCR-EDQIEAEILRILDLTLE 407 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + G + + P + S + + + Sbjct: 408 VLQAFGFDDFDVNLSTRP-----------------DKAVGSDQIWEHATAALKAALEKKG 450 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 S+ E A Y D+ K+ D++ + S ++ F ++ + A Sbjct: 451 LDYSVDEGGGAFYGPKIDI---KIRDAIGREWQCSTVQLD----FNLPERFEMEYVAE-- 501 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + R +IE + D Sbjct: 502 DNSRRRPIMIHRALLGSVERFFGVLIEHYAGSFPLWLAPVQVQVLTIT-------DRQDD 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ RL G D E+IG + L P +++G + + + V ++ R Sbjct: 555 YAREVADRLRNRGIRADADLRNEKIGFKIREHTLQRVPYLLVLGDREMETNTVAVRTRSG 614 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M L ++ + ++ Sbjct: 615 EDLGSMDLNQLSERLAGEIASR 636 >gi|254493203|ref|ZP_05106374.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae 1291] gi|268598466|ref|ZP_06132633.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae MS11] gi|226512243|gb|EEH61588.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae 1291] gi|268582597|gb|EEZ47273.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae MS11] Length = 637 Score = 264 bits (674), Expect = 3e-68, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 159/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 231 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 289 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 348 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + +R P S + A+ G + + +P E Sbjct: 407 YKQFGFHDVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 458 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LDAEYVT 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 499 ENNDRARPVMLHRAILGSLERFVGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q+++G K ++KV ++ R Sbjct: 553 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVR-RKA 611 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 612 EDLGSLDLDDFIAQLQQEITD 632 >gi|225028654|ref|ZP_03717846.1| hypothetical protein EUBHAL_02933 [Eubacterium hallii DSM 3353] gi|224954040|gb|EEG35249.1| hypothetical protein EUBHAL_02933 [Eubacterium hallii DSM 3353] Length = 591 Score = 264 bits (674), Expect = 3e-68, Method: Composition-based stats. Identities = 91/444 (20%), Positives = 161/444 (36%), Gaps = 48/444 (10%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L T M + G +LP G + + R+ R G Sbjct: 184 YLNMLEEAKKRDHRKLGKELGLFTIM--EEGPGFPFFLPKGMILKNTLIDYWRKMHTREG 241 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+S P L + LW SG +D Y + M +D P + +++ +SY Sbjct: 242 YEEISTPILLNRQLWETSGHWDHYRENMYT-TVIDDMDFAVKPMNCPGGMLVYKMEPRSY 300 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 + LP ++ L R E + G+MR R F DA+ F +T ++ K+ + Sbjct: 301 KELPLRLGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIF-MTEAQIENEIQKVVKLIDEV 359 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + + P + E + + + Sbjct: 360 YKKFGFTYH-VELSTRPADSMGTEE-----------------EWEVATNALENAIKAMNI 401 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H L DS+ + ++ F ++ A + G Sbjct: 402 PYEVNEGDGAFYGPKLDFH---LQDSIGRTWQCGTIQLD----FQLPQRF----EAEYIG 450 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + G++ ++ + GK W +AP + ++ + D Sbjct: 451 ADGEKHRPIMIHRVVFGSIERFIGILIEHYAGKFPTW---LAPVQAKVLPVSDK---FAD 504 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR-- 421 +++ L G V DD E++G + A L P +I+G K S V ++ R Sbjct: 505 YAKQVAEALKASGVRVEVDDRDEKLGYKIRQAQLQKVPYMLILGEKEQSAGTVSVRKRDL 564 Query: 422 ----LTGIREDMSLEEVINYASHR 441 + MS+EE Sbjct: 565 IDENDSPELGTMSVEEFAAIIKEE 588 >gi|331085681|ref|ZP_08334764.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406604|gb|EGG86109.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA] Length = 643 Score = 264 bits (674), Expect = 3e-68, Method: Composition-based stats. Identities = 81/442 (18%), Positives = 144/442 (32%), Gaps = 39/442 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L T I + G +LP G + + RE R Sbjct: 229 EYLAKIEEAKKRDHRKLGKELGLFT--ILEEGPGFPIFLPKGMILKNTLIDYWREVHTRA 286 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G +E+S P + + LW SG + Y + M +++ P + ++++ S Sbjct: 287 GYVEISTPIMLNKQLWETSGHWAHYKENMYT-TVIDEEDFAIKPMNCPGGILVYKTEPHS 345 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ R E G+MR R F DA+ F + K + Sbjct: 346 YRDLPLRMGELGTVHRHEKSGALHGLMRVRSFTQDDAHIFMTREQIKDE--IKGVARLID 403 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + L + + P S E D + + D++ Sbjct: 404 EVYSLFGFKYHVELSTKPEDSMGSQE-----------------DWDIATDALRSALDELQ 446 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E A Y D H E D+L + ++ F ++ + A Sbjct: 447 LPYVINEGDGAFYGPKIDFHLE---DTLGRTWQCGTIQLD----FQLPLRFEMEYIAA-- 497 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + R + +IE + + Sbjct: 498 DGEKHRPIMVHRVVFGSIERFIGILIEHFAGAFPTWLAPEQVKVLPI-------SEKYHE 550 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ A+L + D+ E+IG + A L P ++VG+K + V ++ R Sbjct: 551 YANEVAAKLKEAKIRCSVDERSEKIGYKIRDARLNKIPYMLVVGAKEQEEGVVSVRSRFL 610 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G SL+ I + N Sbjct: 611 GDEGQRSLDTFIAEITEEIKNR 632 >gi|251789558|ref|YP_003004279.1| threonyl-tRNA synthetase [Dickeya zeae Ech1591] gi|247538179|gb|ACT06800.1| threonyl-tRNA synthetase [Dickeya zeae Ech1591] Length = 642 Score = 264 bits (674), Expect = 3e-68, Method: Composition-based stats. Identities = 79/445 (17%), Positives = 143/445 (32%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S Y + + RD +L L + + + G+ W G + A +R + Sbjct: 229 LSAYLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEAFVRMKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + LW ++G +++Y + M ++ P + IF + Sbjct: 287 EYQYQEVKGPFMMDRVLWEKTGHWENYKEAMFT-TSSENREYCIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F + N Sbjct: 346 KSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQVRDE-VNNCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G + I ++ + P S E D + Sbjct: 405 YDMYSTFGFEKIVVKLSTRPEKRIGSDE-----------------TWDRAEEDLAAALTE 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 A Y + L D L + ++ F + S A+ Sbjct: 448 NGLPFEYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGRLS----AS 496 Query: 302 FKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G + + V + +G+M ++ G W V +++ Sbjct: 497 YVGENNERQVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQAVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ +L G V D E+IG + L P ++ G K V KV ++ Sbjct: 551 QSDYVSELTRKLQDAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R M++ EVI + Sbjct: 611 RRGKDLGSMNVSEVITKLQEEIRSR 635 >gi|325661884|ref|ZP_08150505.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA] gi|325471862|gb|EGC75079.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA] Length = 643 Score = 264 bits (674), Expect = 3e-68, Method: Composition-based stats. Identities = 81/442 (18%), Positives = 144/442 (32%), Gaps = 39/442 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L T I + G +LP G + + RE R Sbjct: 229 EYLAKIEEAKKRDHRKLGKELGLFT--ILEEGPGFPIFLPKGMILKNTLIDYWREVHTRA 286 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G +E+S P + + LW SG + Y + M +++ P + ++++ S Sbjct: 287 GYVEISTPIMLNRQLWETSGHWAHYKENMYT-TVIDEEDFAIKPMNCPGGILVYKTEPHS 345 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ R E G+MR R F DA+ F + K + Sbjct: 346 YRDLPLRMGELGTVHRHEKSGALHGLMRVRSFTQDDAHIFMTREQIKDE--IKGVARLID 403 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + L + + P S E D + + D++ Sbjct: 404 EVYSLFGFKYHVELSTKPEDSMGSQE-----------------DWDIATDALRSALDELQ 446 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E A Y D H E D+L + ++ F ++ + A Sbjct: 447 LPYVINEGDGAFYGPKIDFHLE---DTLGRTWQCGTIQLD----FQLPLRFEMEYIAA-- 497 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + R + +IE + + Sbjct: 498 DGEKHRPIMVHRVVFGSIERFIGILIEHFAGAFPTWLAPEQVKVLPI-------SEKYHE 550 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ A+L + D+ E+IG + A L P ++VG+K + V ++ R Sbjct: 551 YANEVAAKLKEAKIRCSVDERSEKIGYKIRDARLNKIPYMLVVGAKEQEEGVVSVRSRFL 610 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G SL+ I + N Sbjct: 611 GDEGQRSLDTFIAEITEEIKNR 632 >gi|326426858|gb|EGD72428.1| prolyl-tRNA synthetase [Salpingoeca sp. ATCC 50818] Length = 447 Score = 264 bits (674), Expect = 3e-68, Method: Composition-based stats. Identities = 144/440 (32%), Positives = 234/440 (53%), Gaps = 19/440 (4%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 + F+P+L+E P+ A SH+L+LR G I Q G+Y+ LP+ + + + +++R E N Sbjct: 11 RLFVPLLKEVPKHAVAHSHQLLLRGGYIWQAGSGLYALLPMANRVVQRLQSLVRAELNAI 70 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G+ E +P + LW +SGR+ G E+ RL DR A THEE +T + S + S Sbjct: 71 GSQECVLPAITDKHLWQQSGRWQEAGDELFRLEDRKGAAYCLAATHEETVTALVSSLVSS 130 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 +R+LP YQ+Q K+RDE+RPR+G++R REF+MKD Y+FD + + ++ +Y K+ Y RI Sbjct: 131 HRSLPLYLYQMQPKYRDEMRPRYGLLRCREFMMKDMYTFDSSEQDARATYAKVVECYQRI 190 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 RLG+ ++A++G IGG LSHEF + A+ GE ++ + E Sbjct: 191 LQRLGVPFAKVQADTGLIGGSLSHEFQIKAEIGEDELIFCDTC-NQAANIEK-------- 241 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ S + +++GIEVGH F GTKYS A F Sbjct: 242 ----IDGLIDACPHASPSPSTSPRPPSASCSWTTSKGIEVGHAFLLGTKYSTVFDAAFLD 297 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 AD + + MG YG+G R+++AV E+ HD +G+IWP ++APF +S+ ++ + + Sbjct: 298 ADSQRQDIHMGCYGLGLTRMLSAVAEAQHDAEGLIWPIAMAPFVVSIASVGRMNTFKDEK 357 Query: 365 CEKIYARLSKV----GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C +Y L+ V D + A + ++G P V+VG + +E+ Sbjct: 358 CRALYEVLNSRPELSDLIV-LDTRDMSPRHKLANSRMVGIPFTVLVGD-WFDSEHLEVYA 415 Query: 421 RLTGIREDMSLEEVINYASH 440 R + ++DMS+EE ++ S Sbjct: 416 RTSHDKQDMSVEEFVSLLSS 435 >gi|260893515|ref|YP_003239612.1| threonyl-tRNA synthetase [Ammonifex degensii KC4] gi|260865656|gb|ACX52762.1| threonyl-tRNA synthetase [Ammonifex degensii KC4] Length = 637 Score = 264 bits (674), Expect = 3e-68, Method: Composition-based stats. Identities = 79/430 (18%), Positives = 142/430 (33%), Gaps = 40/430 (9%) Query: 17 DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS 76 D +L L + + G + P G + + A+ R E R G E+ P L Sbjct: 242 DHRRLGQELDLFS--FQEEGPGFPFFHPKGMIVRNELEALWRREHYRRGYQEIRTPILLK 299 Query: 77 ADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 +LW SG +D Y + M + + + P + I++ + SYR LP ++ Sbjct: 300 RELWERSGHWDHYKENM-YFLEIDGQPYAVKPMNCPGAILIYQQRVHSYRELPLRLAEMG 358 Query: 137 LKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 L R EL G+MR R F DA+ F + K + + ++ + Sbjct: 359 LVHRHELSGVLHGLMRVRSFTQDDAHIFCR-EDQVKEEILGIIDLVDYFYRQVFGFPYHV 417 Query: 196 RAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP 255 + P + + ++ I E A Sbjct: 418 ELSTRPEKS-----------------MGDDHIWELATSALKEALEERGFAYKINEGEGAF 460 Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV-QM 314 Y D H E R + G I + G DG+ H + Sbjct: 461 YGPKIDFHLED----------CLGRTWQCGTI-QLDFLMPEKFDLFYIGEDGQRHRPVML 509 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G++ A++ + +P +AP ++ ++ I +IY LS+ Sbjct: 510 HRVIFGSLERFMAILI---EHFAGAFPLWLAPVQVRILPITDRHH---AYARQIYELLSR 563 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 V D E++ + A + P +++G K ++ V ++HR G M+ E Sbjct: 564 ADLRVELDARNEKVSYKVREAQVQKIPYMLVIGDKEMNSGTVAVRHRSRGDLGAMTPEAF 623 Query: 435 INYASHRFSN 444 + Sbjct: 624 LEKVREEIRT 633 >gi|304387978|ref|ZP_07370150.1| threonine--tRNA ligase [Neisseria meningitidis ATCC 13091] gi|304337977|gb|EFM04115.1| threonine--tRNA ligase [Neisseria meningitidis ATCC 13091] Length = 643 Score = 264 bits (674), Expect = 3e-68, Method: Composition-based stats. Identities = 81/441 (18%), Positives = 160/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 237 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAG 294 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +++Y M + + P + IF + ++SY Sbjct: 295 YKEVKTPQIMDKTFWEKSGHWENYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 353 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 354 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 412 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S + A+ G + + +P E Sbjct: 413 YKQFGFHDVSVKLSLRPEQRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 463 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 464 --------GAFYGPKIEYH---VRDALGRSWQCGTLQLD----FVLPER----LDAEYVT 504 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ ++ G +W V +++ + D Sbjct: 505 ENNDRARPVMLHRAILGSLERFIGILIENYAGSFPLWLAPVQLVIMNIT------ENQAD 558 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G V D E+IG + FP Q++VG K ++KV ++ R Sbjct: 559 YCREVAAKLQAAGFRVELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-RKA 617 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 618 EDLGSLDLDDFIAQLQQEITD 638 >gi|240115143|ref|ZP_04729205.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae PID18] gi|291044371|ref|ZP_06570080.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae DGI2] gi|291011265|gb|EFE03261.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae DGI2] Length = 648 Score = 264 bits (674), Expect = 3e-68, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 159/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 242 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAG 299 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 300 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 358 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 359 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 417 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + +R P S + A+ G + + +P E Sbjct: 418 YKQFGFHDVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 468 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 469 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LDAEYVT 509 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 510 ENNDRARPVMLHRAILGSLERFVGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 563 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q+++G K ++KV ++ R Sbjct: 564 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVR-RKA 622 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 623 EDLGSLDLDDFIAQLQQEITD 643 >gi|163857146|ref|YP_001631444.1| threonyl-tRNA synthetase [Bordetella petrii DSM 12804] gi|229557977|sp|A9IRH6|SYT_BORPD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|163260874|emb|CAP43176.1| thrS [Bordetella petrii] Length = 650 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 80/446 (17%), Positives = 141/446 (31%), Gaps = 41/446 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E R D L L + G+ W P G V +R N G Sbjct: 236 YLHMLEEAERRDHRKIGRDLDLF--HFQDEAPGLIFWHPKGWALWQQVEQYMRAVYNDNG 293 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y + M + ++ P + IF + + SY Sbjct: 294 YQEVKAPQILDLSLWKKTGHWDNYRENMFT-TESENRVYGLKPMNCPGHVQIFNAGLHSY 352 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + + R+E G+MR R F D + F + Sbjct: 353 RELPLRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQLQDEC----------- 401 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + HE + T + S D D + Sbjct: 402 -------ADFTALLQKVYRDFGFHEVLYKVATRPEKRIGSDDIWDKAETALMESLRRTGC 454 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I A Y + L D++ + + ++ G A + Sbjct: 455 EFEISPGEGAFYGPKIEY---TLKDAIGRHWQCGTVQVDFSMPVRLG--------AEYVD 503 Query: 305 -ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G++ ++ +H G W V + + D Sbjct: 504 AQDQRRAPVMLHRAILGSLERFIGMLIENHAGAMPPWLAPVQAVVCCI------SEPSAD 557 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +I L K G V D GE+I + L P ++VG K + V ++ Sbjct: 558 YAAQITQTLKKQGFRVQSDLRGEKITRKIREHSLQKVPYILVVGDKEKQNGTVAVRGLGG 617 Query: 424 GIREDMSLEEVINYASHRFSNNRPVL 449 ++LE+ + + R V+ Sbjct: 618 LDLGVIALEDFAARLAEDVAARRDVV 643 >gi|92113922|ref|YP_573850.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Chromohalobacter salexigens DSM 3043] gi|123387452|sp|Q1QWK7|SYT_CHRSD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|91797012|gb|ABE59151.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Chromohalobacter salexigens DSM 3043] Length = 632 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 86/443 (19%), Positives = 150/443 (33%), Gaps = 41/443 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K +L L+E RD + KL + + + G+ W P G V +R Sbjct: 226 KALKTYLKRLEEAEKRDHRKLARKLDFF--HMQEEAPGMVFWHPRGWTLWQTVEQYMRGV 283 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +G E+ P + LW +SG +D+Y + M + + P + +F S Sbjct: 284 YKDSGYQEIRCPQIMDVSLWQKSGHWDNYAENMF-FTESEKREYALKPMNCPGHVQVFNS 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 ++SYR LP + + R+E G+MR R F D + F + Sbjct: 343 GLRSYRELPVRYGEFGGCHRNEPSGALHGIMRVRAFTQDDGHVFCTEEQIEPEVTAFHRQ 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L ++ G I ++ P S + A+ D +P E Sbjct: 403 -ALAVYRDFGFDDIAVKIALRPEKRLGSDDNWDRAEEALRNALSRCDVEWEELPGE---- 457 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 A Y + H + D L +V ++ G Sbjct: 458 -------------GAFYGPKIEYH---MRDCLGREWQVGTMQVDFMMPTRLG-------- 493 Query: 300 ATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + DG V + +G+M ++ + G +W + +++ Sbjct: 494 AQYVAEDGSRQAPVMLHRAIVGSMERFIGILIEHYAGSMPLWLSPLQAVVLNIT------ 547 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 R+ E + RL K G V D E+IG + L P ++VG K V V + Sbjct: 548 DAQREYAESVTQRLQKSGLRVKTDLRNEKIGFKIREHTLQKIPYLLVVGDKEVEAGAVAV 607 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + R +S++ +I Sbjct: 608 RTRSGEDLGSLSVDALIARLQEE 630 >gi|241758603|ref|ZP_04756718.1| threonine--tRNA ligase [Neisseria flavescens SK114] gi|241321255|gb|EER57427.1| threonine--tRNA ligase [Neisseria flavescens SK114] Length = 637 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 81/441 (18%), Positives = 159/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 231 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQVIEQHMRKELNVAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +++Y M + + P + IF + ++SY Sbjct: 289 YKEVKTPQIMDKTFWEKSGHWENYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 348 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVDEARAFN-ELLVRI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S E A+ G + +P E Sbjct: 407 YKQFGFHDVAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACGVEWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + ++A + Sbjct: 458 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LNAEYVT 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 499 ENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ +L G V D E+IG + FP Q++VG K ++KV ++ R Sbjct: 553 YCREVAVKLQAAGFRVELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-RKA 611 Query: 424 GIREDMSLEEVINYASHRFSN 444 + +++ I ++ Sbjct: 612 EDLGSLDVDDFIAQLQQEITD 632 >gi|45658307|ref|YP_002393.1| threonyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|59798553|sp|Q72PK6|SYT_LEPIC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|45601549|gb|AAS71030.1| threonyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 638 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 73/443 (16%), Positives = 152/443 (34%), Gaps = 40/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD ++ L + + G W P G +++ +R E N+ Sbjct: 234 QYLFQIEEAKKRDHRKIGKEMDLFS--FQKEGPGFPFWHPKGTILWNSLAEYLRSECNKR 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + S++LW +SG +D++ + M D +++ P + + I++ H+ S Sbjct: 292 GYQEIKTPAVLSSELWKKSGHWDNFHENM-YFTDIDEEDYALKPMNCPGCSLIYKHHLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP F + R EL G+ R R F D++ + + Sbjct: 351 YRELPLRFAEFGSVHRHELHGVLHGLFRVRAFTQDDSHIYAPLDYLESE-VMDIIDFTFT 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ + G + P E +F + + Sbjct: 410 VYKKFGFSEFKTFIATRPEKSQGKDE-----------------DWEFATSTLKQSLEKKG 452 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E A Y + + DS+ + ++ + Sbjct: 453 IPYGIKEGEGAFYGPKIEF---NIKDSIGRLWQCGTIQVDFSMP--------ERFDLDYT 501 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 +DG+ + G++ ++ ++GK +W + I I + Sbjct: 502 DSDGQKKRPVMIHRAIYGSLERFIGILIEHYEGKFPLW------ISPNQIRILTVTEKVT 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D + +Y L G V D E+IG++ + L +I+G K + + + ++ R Sbjct: 556 DYAKNVYRELLDSGFRVELDTRNEKIGAKIRDSILKKANYLLILGEKEMESNTLAVRMRG 615 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + ++ I+ ++ Sbjct: 616 QEDTKILTRTGFISNLQDEIKSS 638 >gi|260441039|ref|ZP_05794855.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae DGI2] gi|268600819|ref|ZP_06134986.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID18] gi|268584950|gb|EEZ49626.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID18] Length = 637 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 159/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 231 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 289 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 348 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + +R P S + A+ G + + +P E Sbjct: 407 YKQFGFHDVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 458 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LDAEYVT 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 499 ENNDRARPVMLHRAILGSLERFVGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q+++G K ++KV ++ R Sbjct: 553 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVR-RKA 611 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 612 EDLGSLDLDDFIAQLQQEITD 632 >gi|326563502|gb|EGE13765.1| threonyl-tRNA synthetase [Moraxella catarrhalis 103P14B1] gi|326573810|gb|EGE23767.1| threonyl-tRNA synthetase [Moraxella catarrhalis 101P30B1] Length = 639 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 81/447 (18%), Positives = 150/447 (33%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E RD L L + + + G+ W P G + +R+ Sbjct: 226 KQLKAYLQRLEEAEKRDHRKIGKALNLF--HMQEQAPGMVFWHPNGWTIWQVLEQYMRKV 283 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q G +E+ P + LW +SG +D+Y EM+ + P + +F Sbjct: 284 QKDNGYLEIKTPQIVDRSLWEKSGHWDNY-GEMMFTTASEKRDYAIKPMNCPCHVQVFNQ 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F + + + Sbjct: 343 GLKSYRDLPLRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTNAQIRQEA-LNFIK 401 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L ++ G I M+ + P + E D + Sbjct: 402 LTLDVYKDFGFDHIQMKLSTRPEKRVGADE-----------------LWDLAEQALADAL 444 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D+ + A Y + L D + + ++ F + + Sbjct: 445 DNAGLDWELQAGEGAFYGPKIEF---SLQDCIGRVWQCGTLQLD----FNLPER----LD 493 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A F G G+ + +G+ ++ + G W +++ Sbjct: 494 AEFVGESGERERPVMLHRAILGSFERFIGILIEHYAGLFPAWLAPQQVVVMNIT------ 547 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D+ + ++L+ G D E+IG + L P +I+G K V V + Sbjct: 548 DKQADSVGDVVSKLNAKGYRAISDLRNEKIGFKIRERTLERIPFMLILGDKEVESGTVNV 607 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R M+L++ I Sbjct: 608 RTRTGENLGSMNLDDFIAVLDKAIEKK 634 >gi|325133766|gb|EGC56422.1| threonyl-tRNA synthetase [Neisseria meningitidis M13399] gi|325144077|gb|EGC66385.1| threonyl-tRNA synthetase [Neisseria meningitidis M01-240013] gi|325206438|gb|ADZ01891.1| threonyl-tRNA synthetase [Neisseria meningitidis M04-240196] Length = 637 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 160/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 231 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 289 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 348 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S + A+ G + + +P E Sbjct: 407 YKQFGFHDVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + ++A + Sbjct: 458 --------GAFYGPKIEYH---VRDALGRSWQCGTLQLD----FVLPER----LNAEYVT 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 499 ENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q++VG K ++KV ++ R Sbjct: 553 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-RKA 611 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 612 EDLGSLDLDDFIAQLQQEITD 632 >gi|240117427|ref|ZP_04731489.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae PID1] Length = 648 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 159/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 242 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAG 299 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 300 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 358 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 359 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 417 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + +R P S + A+ G + + +P E Sbjct: 418 YKQFGFHDVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 468 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 469 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LDAEYVT 509 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 510 ENNDRARPVMLHRAILGSLERFVGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 563 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q+++G K ++KV ++ R Sbjct: 564 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVR-RKA 622 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 623 EDLGSLDLDDFIAQLQQEITD 643 >gi|331269136|ref|YP_004395628.1| threonyl-tRNA synthetase [Clostridium botulinum BKT015925] gi|329125686|gb|AEB75631.1| threonyl-tRNA synthetase [Clostridium botulinum BKT015925] Length = 637 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 83/441 (18%), Positives = 154/441 (34%), Gaps = 42/441 (9%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L + + G + P G + + RE + G Sbjct: 232 LHMLEEAKKRDHRKLGKELGLFD--LKEEGPGFPFFYPKGMILRNTLENYWREMHEKAGY 289 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + + LW +SG +D Y + M + + P + +++S + SYR Sbjct: 290 GEIRTPIILNEKLWHQSGHWDHYKENM-YFTKIDGEDYAIKPMNCPGSILVYKSDLHSYR 348 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP ++ L R E G+MR R F DA+ F + + + + Sbjct: 349 ELPIRLGELGLVHRHEYSGALHGLMRVRNFTQDDAHIFMTKEQITSE-ILGVIKMIDNFY 407 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G + + + P S E + ++ Sbjct: 408 GLFGFEYF-VELSTRPEDSMGSDE-----------------DWEDATNGLVKALNEAGLE 449 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y D H + R + G I + ++ GA Sbjct: 450 YKINEGDGAFYGPKIDFHL----------RDCLGRTWQCGTI-QLDFQMPERFDLSYVGA 498 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H G++ ++ + G W +AP ++ ++NI + + Sbjct: 499 DGEKHRPVMAHRVIFGSIERFIGILTEHYAGAFPTW---LAPVQVKIMNITDN---QVEY 552 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 C++I L + G V D E+IG + A L P +++G K ++++ + ++ R G Sbjct: 553 CKEIEKTLKENGIRVELDLRNEKIGYKIREAQLQKIPYMLVLGDKEMNENTIAVRSRKQG 612 Query: 425 IREDMSLEEVINYASHRFSNN 445 M L + + Sbjct: 613 DLGAMQLVDFVAMVKKEVQEK 633 >gi|316983701|gb|EFV62682.1| threonyl-tRNA synthetase [Neisseria meningitidis H44/76] Length = 648 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 160/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 242 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAG 299 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 300 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 358 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 359 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLIRI 417 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S + A+ G + + +P E Sbjct: 418 YKQFGFHDVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 468 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + ++A + Sbjct: 469 --------GAFYGPKIEYH---VRDALGRSWQCGTLQLD----FVLPER----LNAEYVT 509 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 510 ENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQLVIMNIT------ENQAD 563 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q++VG K ++KV ++ R Sbjct: 564 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-RKA 622 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 623 EDLGSLDLDDFIAQLQQEITD 643 >gi|289208097|ref|YP_003460163.1| threonyl-tRNA synthetase [Thioalkalivibrio sp. K90mix] gi|288943728|gb|ADC71427.1| threonyl-tRNA synthetase [Thioalkalivibrio sp. K90mix] Length = 638 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 74/446 (16%), Positives = 147/446 (32%), Gaps = 38/446 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 +Y + + RD +L L + I + G+ W P G + + + Sbjct: 228 LKEYLERLKEAERRDHRKIGQELDLFS--IQDEAGGGLVFWHPKGARIRREIEKYWYDMH 285 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G + P + + +LW SG D Y + M + +A P + +++ Sbjct: 286 EKAGYDFVVSPHIANLELWKTSGHADFYAESMYEPMEDEHQAFQLKPMNCPFHVLMYKDR 345 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR+LP + ++ +R E+ G+MR R F DA+ F + + + Sbjct: 346 LHSYRDLPLRWAEMGTVYRREMSGALHGLMRVRGFTQDDAHIFCR-EDQIEAEVMAVIDL 404 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 L + G +F V T S + + S + + Sbjct: 405 TLEVLQTFG-----------------FEKFDVNLSTKPEDAVGSDEIWEHATASLRSAIE 447 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 S+ E A Y D+ K+ D++ + S ++ F ++ + A Sbjct: 448 KKGLEYSVDEGGGAFYGPKIDI---KIHDAIGREWQCSTVQLD----FNLPERFDMEYVA 500 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + + + + R +IE A + Sbjct: 501 E--DNERRRPIMIHRALLGSVERFFGVLIEHYAGHFPTWLAPVQAEVLTIT-------ER 551 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ L G V D E+IG + L P +++G K + + +V ++ Sbjct: 552 QDDYAREVTRALRDKGFRVESDLRNEKIGFKIREHTLKRVPYLLVLGDKEMENGQVAVRT 611 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R MS+E ++ + Sbjct: 612 RSGEDLGVMSVEAFGERLREEVASRQ 637 >gi|24213940|ref|NP_711421.1| threonyl-tRNA synthetase [Leptospira interrogans serovar Lai str. 56601] gi|59798590|sp|Q8F6R1|SYT_LEPIN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|24194795|gb|AAN48439.1|AE011305_9 threonyl-tRNA synthetase [Leptospira interrogans serovar Lai str. 56601] Length = 638 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 73/443 (16%), Positives = 152/443 (34%), Gaps = 40/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD ++ L + + G W P G +++ +R E N+ Sbjct: 234 QYLFQIEEAKKRDHRKIGKEMDLFS--FQKEGPGFPFWHPKGTILWNSLAEYLRSECNKR 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + S++LW +SG +D++ + M D +++ P + + I++ H+ S Sbjct: 292 GYQEIKTPAVLSSELWKKSGHWDNFHENM-YFTDIDEEDYALKPMNCPGCSLIYKHHLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP F + R EL G+ R R F D++ + + Sbjct: 351 YRELPLRFAEFGSVHRHELHGVLHGLFRVRAFTQDDSHIYAPLDYLESE-VMDIIDFTFT 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ + G + P E +F + + Sbjct: 410 VYKKFGFSEFKTFIATRPEKSQGKDE-----------------DWEFATSTLKQSLEKKG 452 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E A Y + + DS+ + ++ + Sbjct: 453 IPYGIKEGEGAFYGPKIEF---NIKDSIGRLWQCGTIQVDFSMP--------ERFDLDYT 501 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 +DG+ + G++ ++ ++GK +W + I I + Sbjct: 502 DSDGQKKRPVMIHRAIYGSLERFIGILIEHYEGKFPLW------ISPNQIRILTVTEKVT 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D + +Y L G V D E+IG++ + L +I+G K + + + ++ R Sbjct: 556 DYAKNVYRELLDSGFRVELDTRNEKIGAKIRDSILKKANYLLILGEKEMESNTLAVRMRG 615 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + ++ I+ ++ Sbjct: 616 QEDTKILTRTGFISNLQDEIKSS 638 >gi|15895629|ref|NP_348978.1| threonyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] gi|22654130|sp|Q97GK4|SYT_CLOAB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|15025373|gb|AAK80318.1|AE007736_8 Threonyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] gi|325509777|gb|ADZ21413.1| threonyl-tRNA synthetase [Clostridium acetobutylicum EA 2018] Length = 637 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 83/442 (18%), Positives = 153/442 (34%), Gaps = 42/442 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 ++ +L+E RD +L L T +H+ G + P G + + RE ++ G Sbjct: 231 YINMLEEAKKRDHRKIGKELDLFT--MHEEGPGFPFFHPKGMVLKNLLLNYWREVHDKAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+S P + + LW +SG +D Y + M ++ P + +++ +I SY Sbjct: 289 YDEISTPIILNEALWHQSGHWDHYKENM-YFTKIDEADYAIKPMNCPGSILVYKDNIHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP +I L R E G+MR R F DA+ F + ++ + Sbjct: 348 RELPIKLAEIGLVHRHEKSGALHGLMRVRCFNQDDAHIFMTKEQITEE-ILGVIKLIDSF 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + + P S E + + Sbjct: 407 YKVFGFEY-YVELSTRPEDSMGSDE-----------------DWEAATNGLINALNAANL 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H K R + G I + + G Sbjct: 449 EYIVNEGDGAFYGPKIDFHL----------KDCIGRTWQCGTI-QLDFQMPERFDINYIG 497 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + G++ ++ + G W V +++ + Sbjct: 498 ADGEKHRPVMVHRVVFGSIERFIGILIEHYAGAFPTWLAPVQVKVMNIT------DSQVE 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + I +L + G V D E+IG + A L P +++G K + + + ++ R Sbjct: 552 YVDAISEKLKEAGIRVEKDVRNEKIGYKIREAQLKKVPYMIVIGDKEIKEGIISVRSRKE 611 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G M++E+ I + Sbjct: 612 GDLGSMNIEDFIFRINAEVKEK 633 >gi|296113663|ref|YP_003627601.1| threonyl-tRNA synthetase [Moraxella catarrhalis RH4] gi|295921357|gb|ADG61708.1| threonyl-tRNA synthetase [Moraxella catarrhalis RH4] Length = 639 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 81/447 (18%), Positives = 150/447 (33%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E RD L L + + + G+ W P G + +R+ Sbjct: 226 KQLKAYLQRLEEAEKRDHRKIGKALNLF--HMQEQAPGMVFWHPNGWTIWQVLEQYMRKV 283 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q G +E+ P + LW +SG +D+Y EM+ + P + +F Sbjct: 284 QKDNGYLEIKTPQIVDRSLWEKSGHWDNY-GEMMFTTASEKRDYAIKPMNCPCHVQVFNQ 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F + + + Sbjct: 343 GLKSYRDLPLRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTNAQIRQEA-LNFIK 401 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L ++ G I M+ + P + E D + Sbjct: 402 LTLDVYKDFGFDHIQMKLSTRPEKRVGADE-----------------LWDLAEQALADAL 444 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D+ + A Y + L D + + ++ F + + Sbjct: 445 DNAGLDWELQAGEGAFYGPKIEF---SLQDCIGRVWQCGTLQLD----FNLPER----LD 493 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A F G G+ + +G+ ++ + G W +++ Sbjct: 494 AEFVGESGERERPVMLHRAILGSFERFIGILIEHYAGLFPAWLAPQQVVVMNIT------ 547 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D+ + ++L+ G D E+IG + L P +I+G K V V + Sbjct: 548 DKQADSVGDVVSKLNAKGYRAISDLRNEKIGFKIRERTLERIPFMLILGDKEVESGTVNV 607 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R M+L++ I Sbjct: 608 RTRTGENLGSMNLDDFIAVLDKAIEKK 634 >gi|294340009|emb|CAZ88373.1| threonine tRNA synthetase [Thiomonas sp. 3As] Length = 639 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 143/442 (32%), Gaps = 41/442 (9%) Query: 7 FLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L + RD +L L + + G+ W P G V +R+ +G Sbjct: 231 YLHALAEAEKRDHRKLGKELDLF--HFQEEAPGLAFWHPKGWALWQAVEQYMRQVYRDSG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW SG +D+Y + M + + P + IF S ++SY Sbjct: 289 YQEVKGPQILDVSLWKRSGHWDNYSENMF-FTESEKRQFAVKPMNCPGHIQIFNSGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F T + + +++ Sbjct: 348 RDLPIRYGEFGSCHRNEPSGALHGLLRVRGFTQDDGHIFC-TEDQIEAEVTAFHQQAMQV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P + D + Sbjct: 407 YTDFGFTDIALKIALRPEKR-----------------IGEEAVWDKAEAALRAALQACGV 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + H + DS+ +V ++ + A + Sbjct: 450 AWQELPGEGAFYGPKIEYH---MKDSIGRAWQVGTMQVDF--------MMPERLDAEYVD 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+M V+ + G +W V +++ D Sbjct: 499 EHSQRVRPVMLHRAIVGSMERFIGVLIEHYAGAMPLWLAPVQAVVMNIT------DAQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + L+K G V D E+I + L P ++VG + + ++ R Sbjct: 553 YARSVAQALTKQGFRVELDLRNEKINYKIRENALSKVPYLLVVGDQERDAGTIAVRARGN 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 +SLE + S + Sbjct: 613 VNLGVLSLEALTQKLSQEVQSR 634 >gi|297617667|ref|YP_003702826.1| threonyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680] gi|297145504|gb|ADI02261.1| threonyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680] Length = 636 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 80/440 (18%), Positives = 147/440 (33%), Gaps = 41/440 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + G +LP G + + R+E + G Sbjct: 231 YLYKLEEAKKRDHRRLGRELGLFVVL--DEGPGFPFFLPKGMIIRNELENFWRQEHVKAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW +SG ++ Y + M +++ P + +++ ++ SY Sbjct: 289 YQEIKTPIILNRSLWEKSGHWEHYRENM-YFTTIDEEDYAVKPMNCPGGILVYKQNLHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP ++ L R E G+MR R F DA+ F L + ++ + Sbjct: 348 RELPIRLGELGLVHRHEKSGVLHGLMRVRAFTQDDAHIFMLPSQITQE-IKGVIDMVDHF 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G V T + S + + + ++ Sbjct: 407 YRLFGFSY------------------HVELSTKPEKAMGSDEIWEKATGALRQALEEKGM 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D H D R + G I T+ G Sbjct: 449 EYKINEGDGAFYGPKIDFHLRDSLD----------RTWQCGTI-QLDFLMPEKFDLTYVG 497 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ ++ G W +AP ++ +I I + Sbjct: 498 EDGEKHRPVMIHRVIYGSLERFIGILTEHFGGAFPTW---LAPVQVRIIPIT---ERHHG 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ A + G V D E++G + L P ++VG K + V ++ R Sbjct: 552 YAVELEAGFREAGLRVESDLRSEKVGYKIREGQLQRIPYLLVVGDKETENKTVSVRKRKE 611 Query: 424 GIREDMSLEEVINYASHRFS 443 G + E +N + Sbjct: 612 GDLGAQPVAEFLNRIKKEIA 631 >gi|312961943|ref|ZP_07776440.1| Threonyl-tRNA synthetase [Pseudomonas fluorescens WH6] gi|311283753|gb|EFQ62337.1| Threonyl-tRNA synthetase [Pseudomonas fluorescens WH6] Length = 640 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 81/445 (18%), Positives = 148/445 (33%), Gaps = 41/445 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + + G+ W P G + +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRKIGKRLNLF--HLQEEAPGMVFWHPNGWTLYQVLEQYMRKVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG + +Y M ++ P + +F +KSY Sbjct: 289 YLEIKTPQVVDRSLWEKSGHWANYADNMFT-TQSENRDYAIKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+E G+MR R F DA+ F + S + + Sbjct: 348 RELPMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQMQAES-AAFIKLTMDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + M+ + P S E D + D Sbjct: 407 YRDFGFTEVEMKLSTRPEKRVGSDE-----------------LWDRAEAALAAALDSAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ G A + Sbjct: 450 AYDLQPGEGAFYGPKIEF---SLKDCLGRVWQCGTLQLDFNLPIRLG--------AEYVS 498 Query: 305 ADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + H V + +G+ ++ ++ +P +AP + ++NI D Sbjct: 499 EDNSRKHPVMLHRAILGSFERFVGILIEHYE---GAFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L++ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FAAEVEKTLNESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN-RP 447 M + + + + S RP Sbjct: 613 ADLGSMPVAQFAEFLAQAVSRRGRP 637 >gi|308388909|gb|ADO31229.1| putative threonyl-tRNA synthetase [Neisseria meningitidis alpha710] gi|325202484|gb|ADY97938.1| threonyl-tRNA synthetase [Neisseria meningitidis M01-240149] gi|325207764|gb|ADZ03216.1| threonyl-tRNA synthetase [Neisseria meningitidis NZ-05/33] Length = 637 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 160/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 231 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 289 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 348 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S + A+ G + + +P E Sbjct: 407 YKQFGFHDVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + ++A + Sbjct: 458 --------GAFYGPKIEYH---VRDALGRSWQCGTLQLD----FVLPER----LNAEYVT 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 499 ENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q++VG K ++KV ++ R Sbjct: 553 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-RKA 611 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 612 EDLGSLDLDDFIAQLQQEITD 632 >gi|294789007|ref|ZP_06754247.1| threonine--tRNA ligase [Simonsiella muelleri ATCC 29453] gi|294483109|gb|EFG30796.1| threonine--tRNA ligase [Simonsiella muelleri ATCC 29453] Length = 638 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 80/441 (18%), Positives = 156/441 (35%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R E G Sbjct: 232 YITRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPRGWALWQVIEQHMRHELTAAG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG + +Y M L + P + IF ++SY Sbjct: 290 YQEVKTPQVMDKTFWEKSGHWANYKDNMF-LTSSEKRDYAVKPMNCPGHVQIFNHALRSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + ++ + ++I Sbjct: 349 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIAEETRKFNL-LVMKI 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G +++ ++ P S E A+ G + +P E Sbjct: 408 YQQFGFENVSIKLSLRPEKRAGSDEIWDKAEQGLRDALTACGVEWEELPGE--------- 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 459 --------GAFYGPKVEYH---IKDALGRSWQCGTIQLD----FVLPER----LDAEYVT 499 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D V + +G++ ++ H G +W V +++ + Sbjct: 500 EDNNKARPVMLHRAILGSLERFIGILIEEHAGSFPLWLAPVQMVVMNI------SEGQAA 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ A+L G V D E+IG + + +P Q+ VG K +++ +V I+ Sbjct: 554 YAAEVQAKLQAAGFRVDLDTRNEKIGYKIRDNSTMRYPYQLTVGDKEMANGQVSIRK-KA 612 Query: 424 GIREDMSLEEVINYASHRFSN 444 +S+ E+I + Sbjct: 613 ENLGSVSVNELIEMLKKEIAE 633 >gi|268603124|ref|ZP_06137291.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID1] gi|268587255|gb|EEZ51931.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID1] Length = 637 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 159/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 231 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 289 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 348 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + +R P S + A+ G + + +P E Sbjct: 407 YKQFGFHDVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 458 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LDAEYVT 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 499 ENNDRARPVMLHRAILGSLERFVGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q+++G K ++KV ++ R Sbjct: 553 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVR-RKA 611 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 612 EDLGSLDLDDFIAQLQQEITD 632 >gi|161869662|ref|YP_001598829.1| threonyl-tRNA synthetase [Neisseria meningitidis 053442] gi|189083614|sp|A9M375|SYT_NEIM0 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|161595215|gb|ABX72875.1| threonyl-tRNA synthetase [Neisseria meningitidis 053442] Length = 637 Score = 263 bits (673), Expect = 4e-68, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 157/441 (35%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 231 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 289 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 348 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S + A+ G + + +P E Sbjct: 407 YKQFGFHDVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ G A + Sbjct: 458 --------GAFYGPKIEYH---VRDALGRSWQCGTLQLDFVLPERLG--------AEYVT 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 499 ENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQLVIMNIT------ENQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q++VG K ++KV ++ R Sbjct: 553 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-RKA 611 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 612 EDLGSLDLDDFIAQLQQEITD 632 >gi|15676618|ref|NP_273762.1| threonyl-tRNA synthetase [Neisseria meningitidis MC58] gi|22654143|sp|Q9K095|SYT_NEIMB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|7225946|gb|AAF41133.1| threonyl-tRNA synthetase [Neisseria meningitidis MC58] gi|325140125|gb|EGC62654.1| threonyl-tRNA synthetase [Neisseria meningitidis CU385] gi|325200596|gb|ADY96051.1| threonyl-tRNA synthetase [Neisseria meningitidis H44/76] Length = 637 Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 160/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 231 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 289 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 348 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLIRI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S + A+ G + + +P E Sbjct: 407 YKQFGFHDVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + ++A + Sbjct: 458 --------GAFYGPKIEYH---VRDALGRSWQCGTLQLD----FVLPER----LNAEYVT 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 499 ENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQLVIMNIT------ENQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q++VG K ++KV ++ R Sbjct: 553 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-RKA 611 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 612 EDLGSLDLDDFIAQLQQEITD 632 >gi|146307004|ref|YP_001187469.1| threonyl-tRNA synthetase [Pseudomonas mendocina ymp] gi|166225482|sp|A4XTS1|SYT_PSEMY RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|145575205|gb|ABP84737.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Pseudomonas mendocina ymp] Length = 640 Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats. Identities = 81/442 (18%), Positives = 145/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + + G+ W P G + +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRRIGKQLDLF--HLQEEAPGMVFWHPNGWTVYQVLEQYMRQVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M ++ P + IF +KSY Sbjct: 289 YVEVRTPQVVDRILWERSGHWSNYAENMFT-TASENRDYAVKPMNCPCHVQIFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + K + L++ Sbjct: 348 RDLPLRLAEFGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEDQVKKEA-ADFIKLTLQV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I M+ + P S E D + ++ Sbjct: 407 YADFGFTDIAMKLSTRPAKRVGSEE-----------------LWDRAEGALADALNESGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L N + + + A++ Sbjct: 450 AWEYQPGEGAFYGPKIEF---TLRDCLGRNWQCGTLQYDPNLP--------ERLDASYIA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ + +P +AP + ++NI D Sbjct: 499 EDNNRKRPVMLHRAILGSFERFIGMLI---EHYAGSFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + L++ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FAREAEKTLNQSGFRAKVDLRNEKIGFKIREHTLLKVPYLLVIGDREVETRSVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M LE+ S Sbjct: 613 VDLGSMPLEQFAAQLQQAVSRR 634 >gi|325136057|gb|EGC58667.1| threonyl-tRNA synthetase [Neisseria meningitidis M0579] Length = 643 Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 160/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 237 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAG 294 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 295 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 353 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 354 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 412 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S + A+ G + + +P E Sbjct: 413 YKQFGFHDVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 463 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + ++A + Sbjct: 464 --------GAFYGPKIEYH---VRDALGRSWQCGTLQLD----FVLPER----LNAEYVT 504 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 505 ENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 558 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q++VG K ++KV ++ R Sbjct: 559 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-RKA 617 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 618 EDLGSLDLDDFIAQLQQEITD 638 >gi|119897370|ref|YP_932583.1| threonyl-tRNA synthetase [Azoarcus sp. BH72] gi|166223320|sp|A1K4E1|SYT_AZOSB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|119669783|emb|CAL93696.1| ThrS protein [Azoarcus sp. BH72] Length = 638 Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 151/444 (34%), Gaps = 41/444 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD +L L I + + G+ W G V +R +R Sbjct: 229 ESYLHMLEEAEKRDHRKLGRQLDLF--HIQEEAPGMVFWHAKGWTLWQQVEQYLRGTISR 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW +SG + Y +++ P + IF +K Sbjct: 287 HGYQEVRTPQIVDRSLWEKSGHWGMY-SDLMFTTQSEKHDYAVKPMNCPCHIQIFNQGLK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F+ DA+ F + + + Sbjct: 346 SYRDLPLRMAEFGSCHRNEPSGSLHGIMRVRNFVQDDAHIFCTDEQVQEEA-AAFIALLQ 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +++ G + I ++ + P + E D + Sbjct: 405 KVYADFGFRDIQIKLSTRPEKRVGADE-----------------QWDAAEAALAAALKAQ 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + L D L + ++ G A + Sbjct: 448 GLEYELQPGEGAFYGPKIEF---SLKDCLNRVWQCGTLQLDFNLPVRLG--------AEY 496 Query: 303 KGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D K V + +G++ ++ + G +W V +++ + Sbjct: 497 VAEDNTKKFPVMLHRAIVGSLERFIGILIEHYAGAMPLWLAPVHAVVMNI------SEGQ 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ RL + G V D E+I + + P Q++VG K + V ++ R Sbjct: 551 ADYATEVVNRLREAGFRVEADLRNEKINYKIREHSVHKLPYQLVVGEKEKAAGVVAVRVR 610 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 +SL+++I + ++ Sbjct: 611 GGQDLGQLSLDKLIERWNGELASR 634 >gi|94264275|ref|ZP_01288069.1| Threonyl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1] gi|94270245|ref|ZP_01291687.1| Threonyl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1] gi|93450880|gb|EAT01895.1| Threonyl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1] gi|93455320|gb|EAT05527.1| Threonyl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1] Length = 641 Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats. Identities = 79/449 (17%), Positives = 157/449 (34%), Gaps = 40/449 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 +Y + + RD +L L T I Q G+ W P G + R++ Sbjct: 230 LKQYLAQLEEAKRRDHRKLGKELELFT--IQEQIGPGLILWQPKGALLRRLIEDYWRQQH 287 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G + P + +LW SG D YG M D D P + ++++ Sbjct: 288 YQHGYDLLYTPHIARRELWQTSGHLDFYGDNMFAGMDIEDVQYQLKPMNCPFHIALYKTR 347 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SYR P + ++ +R E G+MR R F DA+ F + Y ++ Sbjct: 348 KRSYREFPLRWCELGTVYRFEKTGALHGLMRVRGFTQDDAHIFCRPEQLEDEIY-RILDF 406 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 L + G + + P + S + + + Sbjct: 407 NLHVLKAFGFSDYEIYLSTRP-----------------EKYVGSDEHWQQATEALKLALE 449 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 S+ Y D+ K+ D L + S ++ F ++ Sbjct: 450 HKGLAYSVDPGEGVFYGPKIDI---KIKDVLGRAWQCSTIQVD----FNLPERF----KL 498 Query: 301 TFKGAD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G D G+ + + +G++ V+ + +P +AP + ++NI Sbjct: 499 GYTGEDSGEHRPIMIHRALMGSLERFFGVLI---EHYAGAFPLWLAPVQARILNIT---D 552 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D K+Y +L + G V D+ E++ + A L P ++VG + +D + ++ Sbjct: 553 AQLDYVGKVYEQLRRAGVRVEKDERNEKLNYKIREAQLQKIPYMLVVGDQEAADGTITVR 612 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNRPV 448 R M++ + + + + + + Sbjct: 613 QRDGKNLPAMTVADFAALVAGQVAESHNL 641 >gi|299535482|ref|ZP_07048804.1| threonyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1] gi|298729243|gb|EFI69796.1| threonyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1] Length = 643 Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats. Identities = 82/442 (18%), Positives = 172/442 (38%), Gaps = 32/442 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K+ L +L+E RD +L L T + +G+ WLP G + I +++ Sbjct: 232 KHHLQMLEEAKERDHRKIGKELELFTT-SQKVGQGLPLWLPNGATIRRVIERYIVDKELS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P L S +L+ SG +D Y + + +++ +I P + ++++ + Sbjct: 291 LGYKHVYTPVLGSKELYQTSGHWDHYQDSIFPPMEMDNETLIMRPMNCPHHMMVYKNSMH 350 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYRNLP ++ R E+ ++ + + + P+ K + K+ L Sbjct: 351 SYRNLPLRIAELGTMHRYEMSGAVSGLQRVRGMTLNDAHIFVRPDQIKAEFQKVVQLILE 410 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ L R D +T+ + D M S D++ Sbjct: 411 VYKDFDLHDYSFRLS--------------YRDPADTEKYFDDDAMWEKAQSMLKEAMDEL 456 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ ++ + + +S ++ F ++ T+ Sbjct: 457 GLDYFEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LTY 505 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DGK H + G + + + + +P +AP ++ +I + ++ Sbjct: 506 VGEDGKPHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVEVIPV--SNEAHF 561 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D ++I +L+ G V DD E++G + A + P +++G K V + V ++ Sbjct: 562 DYAKQIEEQLTAAGLRVEMDDREEKLGYKIREAQMKKIPYMLVIGDKEVEANGVNVRRYG 621 Query: 423 TGIREDMSLEEVINYASHRFSN 444 + E +S E+ ++ + Sbjct: 622 SKDSETISFEDFLSTIKTEITK 643 >gi|326789266|ref|YP_004307087.1| threonyl-tRNA synthetase [Clostridium lentocellum DSM 5427] gi|326540030|gb|ADZ81889.1| threonyl-tRNA synthetase [Clostridium lentocellum DSM 5427] Length = 586 Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats. Identities = 93/440 (21%), Positives = 159/440 (36%), Gaps = 41/440 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L T I G +LP G + + R+ R G Sbjct: 184 YLQSIEEAKKRDHRKLGKELGLFT--ILDEGPGFPFFLPKGMVLKNLLIDYWRKLHTREG 241 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+S P + + +LW SG +D Y + M +D P + +++ SY Sbjct: 242 YVEISTPMMLNKELWETSGHWDHYRENMYT-TVIDDTDFAIKPMNCPGGMLVYKLQPHSY 300 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP ++ L R E G+MR R F DA+ F + + + + Sbjct: 301 RELPIRMGELGLVHRHEKSGALHGLMRVRCFTQDDAHIFMTQEQITDE-IKGVVRLIDEV 359 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G K + + P S E + D++ Sbjct: 360 YSKFGFKYH-VELSTRPENSIGSDE-----------------DWNVATEGLKKALDEMQL 401 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D H E DS+ + ++ F ++ A + G Sbjct: 402 EYVINEGDGAFYGPKIDFHLE---DSIGRTWQCGTIQLD----FQLPVRF----EAEYIG 450 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADGK H + G++ ++ + +P +AP ++ ++ I + Sbjct: 451 ADGKKHRPIMIHRVVFGSIERFIGILI---EHYAGKFPLWLAPVQVKVLPISDK---FSE 504 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + A L K G D+ E+IG + A L P V+VG K V + V I+ R Sbjct: 505 YGAFVMAELQKQGIRCEIDNRDEKIGYKIREAQLGKVPYMVVVGQKEVESNLVTIRRRDE 564 Query: 424 GIREDMSLEEVINYASHRFS 443 +E S++E + ++ Sbjct: 565 STQEGYSIQEFVQLLNNEIE 584 >gi|326562776|gb|EGE13071.1| threonyl-tRNA synthetase [Moraxella catarrhalis 46P47B1] gi|326563180|gb|EGE13448.1| threonyl-tRNA synthetase [Moraxella catarrhalis 12P80B1] Length = 639 Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats. Identities = 81/447 (18%), Positives = 149/447 (33%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E RD L L + + + G+ W P G + +R+ Sbjct: 226 KQLKAYLQRLEEAEKRDHRKIGKALNLF--HMQEQAPGMVFWHPNGWTIWQVLEQYMRKV 283 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q G +E+ P + LW +SG +D+Y EM+ + P + +F Sbjct: 284 QKDNGYLEIKTPQIVDRSLWEKSGHWDNY-GEMMFTTASEKRDYAIKPMNCPCHVQVFNQ 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F + + Sbjct: 343 GLKSYRDLPLRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTNAQIRSEA-LNFIK 401 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L ++ G I M+ + P + E D + Sbjct: 402 LTLDVYKDFGFDHIQMKLSTRPEKRVGADE-----------------LWDLAEQALADAL 444 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D+ + A Y + L D + + ++ F + + Sbjct: 445 DNAGLDWELQAGEGAFYGPKIEF---SLQDCIGRVWQCGTLQLD----FNLPER----LD 493 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A F G G+ + +G+ ++ + G W +++ Sbjct: 494 AEFVGESGERERPVMLHRAILGSFERFIGILIEHYAGLFPAWLAPQQVVVMNIT------ 547 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D+ + ++L+ G D E+IG + L P +I+G K V V + Sbjct: 548 DKQADSVGDVVSKLNAKGYRAISDLRNEKIGFKIRERTLERIPFMLILGDKEVESGTVNV 607 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R M+L++ I Sbjct: 608 RTRTGDNLGSMNLDDFIAVLDKAIEKK 634 >gi|313896316|ref|ZP_07829869.1| threonine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430] gi|312975115|gb|EFR40577.1| threonine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430] Length = 639 Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats. Identities = 84/444 (18%), Positives = 159/444 (35%), Gaps = 42/444 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + +H+ G + P G + + RE R G Sbjct: 233 YLHMLEEAEKRDHRKLGRELDLFS--LHEEGPGFPFFHPNGMILRNELLNYWREVHRRYG 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+S P + S LW SG + Y + M +++ P + ++RS + SY Sbjct: 291 YSEISTPVILSRKLWETSGHWFHYRENMYT-TQIDEEDYAIKPMNCPGCMLVYRSQLHSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R EL G+ R R F DA+ +TPE + + + Sbjct: 350 RDLPLRLAELGLVHRHELSGALHGLFRVRNFTQDDAH-LFVTPEQIEGEIQHTIDLFDEV 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + GL + P S E + ++ Sbjct: 409 YRTFGLSYK-AELSTRPDDSMGSDE-----------------MWELATSGLQKALENRGL 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H L DS+ + +++ F T+ G Sbjct: 451 DYIVNEGDGAFYGPKIDFH---LRDSIGRTWQCGTIQLDMSLPEKFD--------LTYVG 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ ++ + +P + P ++ ++ I + + Sbjct: 500 EDGEKHRPVMLHRVVYGSIERFIGILI---ENFAGAFPVWMTPVQVRILPIT---ERHAE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E++ R+ G V D+ E+ G + + + P ++VG + V ++ Sbjct: 554 YAEELRKRMFDRGIRVEVDNRNEKTGYKIRESQVKKTPYTLVVGDQEQESGTVALRKYGE 613 Query: 424 GIREDMSLEEVINYASHRFSNNRP 447 MS ++ I + + + P Sbjct: 614 KDSTVMSADDFIAFVEKKIAERSP 637 >gi|330503839|ref|YP_004380708.1| threonyl-tRNA synthetase [Pseudomonas mendocina NK-01] gi|328918125|gb|AEB58956.1| threonyl-tRNA synthetase [Pseudomonas mendocina NK-01] Length = 640 Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 145/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + + G+ W P G + +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRRIGKQLDLF--HLQEEAPGMVFWHPNGWTVYQVLEQYMRQVQREHG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M ++ P + IF +KSY Sbjct: 289 YVEVRTPQVVDRILWERSGHWSNYAENMFT-TASENRDYAVKPMNCPCHVQIFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + K + L++ Sbjct: 348 RDLPLRLAEFGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEDQVKKEA-ADFIRLTLQV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I M+ + P S E D + ++ Sbjct: 407 YSDFGFTDIAMKLSTRPAKRVGSDE-----------------LWDRAEGALAEALNESGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L N + + + A++ Sbjct: 450 AWEYQPGEGAFYGPKIEF---TLRDCLGRNWQCGTLQYDPNLP--------ERLDASYIA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ + +P +AP + ++NI D Sbjct: 499 EDNNRKRPVMLHRAILGSFERFIGMLI---EHYAGSFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + L++ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FAREAEKTLNQSGFRAKVDLRNEKIGFKIREHTLLKVPYLLVIGDREVETRSVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M +E+ S Sbjct: 613 VDLGSMPIEQFAAQLQQAVSRR 634 >gi|307131177|ref|YP_003883193.1| threonyl-tRNA synthetase [Dickeya dadantii 3937] gi|306528706|gb|ADM98636.1| threonyl-tRNA synthetase [Dickeya dadantii 3937] Length = 642 Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats. Identities = 78/445 (17%), Positives = 142/445 (31%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S Y + + RD +L L + + + G+ W G + A +R + Sbjct: 229 LSAYLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEAFVRMKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + LW ++G +++Y + M ++ P + IF + Sbjct: 287 EYQYQEVKGPFMMDRVLWEKTGHWENYKEAMFT-TSSENREYCIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F + N Sbjct: 346 KSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRDE-VNSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G + I ++ + P S D D + Sbjct: 405 YDMYSTFGFEKIVVKLSTRPEKR-----------------IGSDDMWDRAEEDLAAALTE 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 A Y + L D L + ++ F + S A+ Sbjct: 448 NGIPFDYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGRLS----AS 496 Query: 302 FKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G + + V + +G+M ++ G W V +++ Sbjct: 497 YVGENNERQVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQAVVMNIT------DT 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ +L G V D E+IG + L P ++ G K V KV ++ Sbjct: 551 QSDYVSELTRKLQDAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R + + EVI + Sbjct: 611 RRGKDLGSLDVSEVITKLQEEIRSR 635 >gi|296102767|ref|YP_003612913.1| threonyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057226|gb|ADF61964.1| threonyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 642 Score = 263 bits (671), Expect = 5e-68, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 142/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQVRDE-VNACIRMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------TWDRAEADLAVALEENGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F + S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPQRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G++ ++ G W V +++ D Sbjct: 500 EDNERQVPVMIHRAILGSLERFIGILTEEFAGFFPTWLAPVQVVVMNIT------DSQAD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVKELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + EVI + Sbjct: 614 KDLGSLDVSEVIEKLQQEIRSR 635 >gi|325263795|ref|ZP_08130528.1| threonine--tRNA ligase [Clostridium sp. D5] gi|324030833|gb|EGB92115.1| threonine--tRNA ligase [Clostridium sp. D5] Length = 641 Score = 263 bits (671), Expect = 5e-68, Method: Composition-based stats. Identities = 89/444 (20%), Positives = 161/444 (36%), Gaps = 41/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L M+ G +LP G + + RE +R Sbjct: 229 EYLTMLEEAKKRDHRKLGKELGLF--MMRDEGPGFPFFLPKGMVLKNTLLDYWREIHSRN 286 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G +E++ P + S LW SG +D Y M +++ P + +++S +S Sbjct: 287 GYVEIATPIMLSRHLWETSGHWDHYKDNMYT-TVIDEEDFAIKPMNCPGGILVYQSEPRS 345 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ L R E + G+MR R F DA+ F + + K + Sbjct: 346 YRDLPLRMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMMPEQIRDE--IKDVARLID 403 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + L + + P S E + + DD+ Sbjct: 404 EVYSLFGFKYHVELSTRPEDSMGSDE-----------------DWEMATEALRGALDDLE 446 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H E DS+ + ++ F ++ + Sbjct: 447 LPYVVNEGDGAFYGPKIDFHLE---DSIGRTWQCGTIQLD----FQLPLRFD----LEYT 495 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 GADG+ H + G++ ++ G W +AP ++ ++ I Sbjct: 496 GADGEKHRPIMIHRVAFGSIERFIGILIEHFAGAFPTW---LAPVQVKVLPISDK---YI 549 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +K+ L+K G D E+IG + A + P ++VG+K D V ++ R Sbjct: 550 KYGKKVQDTLNKAGIRADIDMRAEKIGYKIREAQMQKIPYMLVVGAKEEEDRLVSVRSRF 609 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 G S++E I + + + Sbjct: 610 AGDEGQKSMDEFIASITSEIAGKK 633 >gi|293610405|ref|ZP_06692706.1| threonyl-tRNA synthetase [Acinetobacter sp. SH024] gi|292827637|gb|EFF86001.1| threonyl-tRNA synthetase [Acinetobacter sp. SH024] gi|325124561|gb|ADY84084.1| threonyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2] Length = 640 Score = 263 bits (671), Expect = 5e-68, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 146/442 (33%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD L L + + + G+ W P G + +R+ Q G Sbjct: 231 YIKRIEEAEKRDHRKIGKALDLF--HMQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG +Y M ++ P + +F +KSY Sbjct: 289 YLEIKTPQIVDFTLWEKSGHAANYADNMFT-THSENRNYAVKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + + L + Sbjct: 348 RDLPIRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGQE-VADFIKLTLEV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + M+ + P D S D Sbjct: 407 YKDFGFEEVQMKLSTRPEKR-----------------VGDDALWDMAEKSLADALDAAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + + F + + A++ Sbjct: 450 EWELQPGEGAFYGPKIEF---SLKDCLGRVWQCGTIQCD----FNLPER----LDASYVT 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ + P ++P + ++NI + Sbjct: 499 EDNDRDQPVMLHRAILGSFERFIGILI---EHYAGFMPPWLSPLQACVMNITDS---QAE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ACEK+ A+L + G D E+IG + L P +++G + V + V ++ R Sbjct: 553 ACEKVVAKLKENGLRAISDLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS++ I+ + Sbjct: 613 KNLGTMSVDAFIDLVKSAVAER 634 >gi|229591579|ref|YP_002873698.1| threonyl-tRNA synthetase [Pseudomonas fluorescens SBW25] gi|259516637|sp|C3JZN7|SYT_PSEFS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|229363445|emb|CAY50645.1| putative threonyl-tRNA synthetase [Pseudomonas fluorescens SBW25] Length = 640 Score = 263 bits (671), Expect = 5e-68, Method: Composition-based stats. Identities = 81/445 (18%), Positives = 148/445 (33%), Gaps = 41/445 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + + G+ W P G + +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRKIGKRLNLF--HLQEEAPGMVFWHPNGWTLYQVLEQYMRKVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG + +Y M ++ P + +F +KSY Sbjct: 289 YLEIKTPQVVDRSLWEKSGHWANYADNMFT-TQSENRDYAIKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+E G+MR R F DA+ F + S + + Sbjct: 348 RELPMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQMQAES-AAFIKLTMDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + M+ + P S E D + D Sbjct: 407 YRDFGFTEVEMKLSTRPEKRVGSDE-----------------LWDRAEAALAAALDSAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ G A + Sbjct: 450 AYDLQPGEGAFYGPKIEF---SLKDCLGRVWQCGTLQLDFNLPIRLG--------AEYVS 498 Query: 305 ADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + H V + +G+ ++ ++ +P +AP + ++NI D Sbjct: 499 EDNSRKHPVMLHRAILGSFERFVGILIEHYE---GAFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L++ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FAAEVEKTLNESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN-RP 447 M + + + + S RP Sbjct: 613 ADLGSMPVAQFAEFLAQAVSRRGRP 637 >gi|332525938|ref|ZP_08402079.1| threonyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2] gi|332109489|gb|EGJ10412.1| threonyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2] Length = 635 Score = 263 bits (671), Expect = 5e-68, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 141/442 (31%), Gaps = 41/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + +HS G W P G V +R G Sbjct: 231 YLRMLEEAEKRDHRKLGRELDLF--HLDEHSPGTVFWHPKGWTVWQEVEQYMRRVYRDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D Y + M + + P + IF+ IKSY Sbjct: 289 YQEVKGPQILDKALWEKTGHWDKYRENMFT-TESEKRDYALKPMNCPGHILIFKQGIKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F D + F ++ Sbjct: 348 RDLPLRYGEFGQCHRNEPTGGLHGIMRVRGFTQDDGHIFCTEDMILGECVAYT-ALLQKV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I + + P S D + Sbjct: 407 YRDFGFTDILYKVATRPEKR-----------------IGSDAIWDKAEEALIESLKRSGC 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I A Y + L D++ + ++ + + A + Sbjct: 450 DYVIAPGDGAFYGPKIEY---TLKDAIGRQWQCGTMQVDFS--------MAERLDAEYVA 498 Query: 305 ADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + H V + +G++ ++ H G +W V S+ D Sbjct: 499 EDGSRRHPVMLHRAIVGSLERFIGILIEQHAGALPVWLAPVQAVVASIT------DSQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L K G V D E+I + + P ++VG K ++ V ++ R Sbjct: 553 YAAEVAKSLQKQGLRVHLDLRNEKINYKIREHSVQKAPFILVVGDKEKANGAVAVRARGN 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M L + + + Sbjct: 613 LDLGVMPLADFQQKIASDIAAK 634 >gi|302874879|ref|YP_003843512.1| threonyl-tRNA synthetase [Clostridium cellulovorans 743B] gi|307690504|ref|ZP_07632950.1| threonyl-tRNA synthetase [Clostridium cellulovorans 743B] gi|302577736|gb|ADL51748.1| threonyl-tRNA synthetase [Clostridium cellulovorans 743B] Length = 635 Score = 263 bits (671), Expect = 6e-68, Method: Composition-based stats. Identities = 88/442 (19%), Positives = 161/442 (36%), Gaps = 42/442 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L + + G +LP G +++ R + G Sbjct: 231 YLNMLEEAKKRDHRKLGKELE--LFTLLEEGPGFPFFLPKGMIVRNSLEDYWRVIHKKAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + S +LW +SG +D Y + M ++K P + +++ + SY Sbjct: 289 YQEIKTPIILSEELWHQSGHWDHYKENM-YFTSIDEKPFAVKPMNCPGSILAYKNALHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP ++ L R EL G+MR R F DA+ F + + + + Sbjct: 348 RELPLRLAELGLVHRHELSGALHGLMRVRCFTQDDAHIFMTKDQITDE--LLDLIKLIDD 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F++ + + P S E + T D Sbjct: 406 FYKNFGFEYFVELSTRPENSMGSDE-----------------DWELATNGLRTALDKAGL 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D H L DS+ + ++ F ++ + G Sbjct: 449 SYKINEGDGAFYGPKIDFH---LRDSIGRTWQCGTIQLD----FQLPERFD----IDYIG 497 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ ++ + +P +AP ++ ++NI + Sbjct: 498 PDGEKHRPVMVHRVVFGSIERFIGILI---EHFAGAFPAWLAPVQVKVMNITDSSKG--- 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E+I L + G V D E+IG + A L P +++G K +++ + ++ R Sbjct: 552 YVEEIARVLEEKGIRVESDLRNEKIGYKIREAQLQKIPYMIVIGEKEMNEKTIAVRSRKD 611 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G MS+EE N + Sbjct: 612 GDIGTMSIEEFSNKLLEEIKSK 633 >gi|289434839|ref|YP_003464711.1| hypothetical protein lse_1474 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171083|emb|CBH27625.1| thrS [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 640 Score = 263 bits (671), Expect = 6e-68, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 168/441 (38%), Gaps = 32/441 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 F+ + +E RD +L L T I + +G+ WLP G + I +++ R G Sbjct: 230 FIQMQKEAKERDHRKLGKELELFTNSI-EVGQGLPLWLPKGATIRRVIERYIVDKEERLG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I SY Sbjct: 289 YNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 R LP ++ + R E+ ++ + + + P+ K + ++ L ++ Sbjct: 349 RELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDIIS 244 +K R D T+ + D D + D++ Sbjct: 409 KDFDIKDYSFRLS--------------YRDPKNTEKYFDDDAMWDKAQAMLKSAMDEMGM 454 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y DV ++ ++ + + +S ++ F ++ T+ G Sbjct: 455 DYFEADGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LTYIG 503 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H + G + + + + +P +AP ++ LI + A D Sbjct: 504 EDGEKHRPVVIHR--GVVSTMERFVAYLIEEYKGAFPTWLAPVQMELIPVNA--DAHLDY 559 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + +L + G V DD E++G + A P +++G + + V ++ + Sbjct: 560 AKGVQDKLQRAGLRVEVDDRNEKLGYKIREAQTKKIPYALVLGDQEMESGTVNVRRYGSK 619 Query: 425 IREDMSLEEVINYASHRFSNN 445 E M L+ I+ S Sbjct: 620 DSETMELDTFISQVVQEVSKY 640 >gi|15615703|ref|NP_244007.1| threonyl-tRNA synthetase 1 [Bacillus halodurans C-125] gi|20139931|sp|Q9K866|SYT_BACHD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|10175763|dbj|BAB06860.1| threonyl-tRNA synthetase 1 [Bacillus halodurans C-125] Length = 645 Score = 263 bits (671), Expect = 6e-68, Method: Composition-based stats. Identities = 79/437 (18%), Positives = 169/437 (38%), Gaps = 34/437 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L + + + +G+ WLP G + I +++ + G Sbjct: 237 LRLLEEAKERDHRKLGKELGIFA-LSQKVGQGLPLWLPKGATIRRIIERYIVDKEEKLGY 295 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S++L+ SG +D Y +M + ++ ++ P + ++++ ++SYR Sbjct: 296 QHVYTPVLASSELYKTSGHWDHYKDDMFPTMEMENEELVLRPMNCPHHMMVYKTEMRSYR 355 Query: 127 NLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP ++ L R E+ G+ R R + DA+ F + + ++ Sbjct: 356 QLPLRIAELGLMHRYEMSGAVSGLQRVRGMTLNDAHIFCRPDQIKDEFVRVVR-LIQAVY 414 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIIS 244 GLK+ R D + + + D M D++ Sbjct: 415 EDFGLKNYSFRLS--------------YRDPEDKEKYFDDDNMWNKAQGMLKEAMDELEL 460 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ +L +++ +S ++ F ++ T+ G Sbjct: 461 EYFEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFD----LTYVG 509 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H + G + + + + +P +AP ++ +I + + + Sbjct: 510 EDGQPHRPVVVHR--GVVSTMERFVAFLLEEYKGAFPTWLAPVQVQVIPVSP--EAHLEY 565 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + L + G V D+ E+IG + A + P +++G K V + V ++ Sbjct: 566 AKNVQETLQQAGIRVEIDERDEKIGYKIREAQMQKIPYMLVLGDKEVEANGVNVRKYGEK 625 Query: 425 IREDMSLEEVINYASHR 441 M L+E + + + Sbjct: 626 DSSSMGLDEFVRHVARE 642 >gi|319410089|emb|CBY90425.1| threonyl-tRNA synthetase (threonine-tRNA ligase; ThrRS) [Neisseria meningitidis WUE 2594] Length = 637 Score = 263 bits (671), Expect = 6e-68, Method: Composition-based stats. Identities = 81/441 (18%), Positives = 159/441 (36%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 231 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +++Y M + + P + IF + ++SY Sbjct: 289 YKEVKTPQIMDKTFWEKSGHWENYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 348 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ P S + A+ G + + +P E Sbjct: 407 YKQFGFHDVSVKLSLRPEQRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 458 --------GAFYGPKIEYH---VRDALGRSWQCGTLQLD----FVLPER----LDAEYVT 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 499 ENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQLVIMNIT------ENQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q++VG K ++KV ++ R Sbjct: 553 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVR-RKA 611 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 612 EDLGSLDLDDFIAQLQQEITD 632 >gi|240080190|ref|ZP_04724733.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae FA19] Length = 648 Score = 263 bits (671), Expect = 6e-68, Method: Composition-based stats. Identities = 81/441 (18%), Positives = 158/441 (35%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 242 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAG 299 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 300 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 358 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 359 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 417 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + +R P S + A+ G + + +P E Sbjct: 418 YKQFGFHDVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 468 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + + D+L + + ++ F + + A + Sbjct: 469 --------GAFYGPKIEYR---VKDALGRSWQCGTLQLD----FVLPER----LDAEYVT 509 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 510 ENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 563 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q+++G K ++KV ++ R Sbjct: 564 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVR-RKA 622 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 623 EDLGSLDLDDFIAQLQQEITD 643 >gi|317491930|ref|ZP_07950364.1| threonyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920051|gb|EFV41376.1| threonyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 645 Score = 262 bits (670), Expect = 6e-68, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 142/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + A +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEAFVRVKLKEYD 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMGEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNSCIKMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D + Sbjct: 408 YSIFGFEKIAVKLSTRPEKRIGSDE-----------------IWDRAEEDLAEALKENGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ F + ++A++ G Sbjct: 451 PFEYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGR----LNASYVG 499 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + V + +G+M ++ + G W V +++ D Sbjct: 500 ENNERLVPVMIHRAILGSMERFIGILTEEYAGFYPTWLAPVQVQVMNIT------DAQAD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L G D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVDELTKKLQAAGIRAKSDLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 614 KDLGTMDVNEVIEKLQKEIRSR 635 >gi|295096109|emb|CBK85199.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 622 Score = 262 bits (670), Expect = 6e-68, Method: Composition-based stats. Identities = 78/442 (17%), Positives = 144/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 212 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQ 269 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 270 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 328 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F T + + N + Sbjct: 329 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFC-TEDQVREEVNACIRMVYDM 387 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 388 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------TWDRAEADLAVALEENGI 430 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F + S A++ G Sbjct: 431 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPQRLS----ASYVG 479 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G++ ++ G W V +++ D Sbjct: 480 EDNERQVPVMIHRAILGSLERFIGILTEEFAGFFPTWLAPVQVVVMNIT------DSQAD 533 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 534 YVKELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 593 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + EVI + Sbjct: 594 KDLGSLDVSEVIEKLQQEIRSR 615 >gi|256822932|ref|YP_003146895.1| threonyl-tRNA synthetase [Kangiella koreensis DSM 16069] gi|256796471|gb|ACV27127.1| threonyl-tRNA synthetase [Kangiella koreensis DSM 16069] Length = 639 Score = 262 bits (670), Expect = 6e-68, Method: Composition-based stats. Identities = 82/444 (18%), Positives = 149/444 (33%), Gaps = 41/444 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L L+E RD + L L I + + G+ W G + IRE Sbjct: 229 KAYLHRLEEAEKRDHRKIAKALDLF--HIQEEAPGMIFWHDKGWTIYKTLEQYIRERLKE 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P + LW +SG +D +G +M L +++ P + IF +K Sbjct: 287 HDYQEVKTPQMVDRSLWEKSGHWDKFGDDMFTLK-SDERDYAIKPMNCPCHVQIFNVGLK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F+ DA+ F T + + +K Sbjct: 346 SYRDLPLRMAEFGSCHRNEPSGALHGIMRLRNFVQDDAHIFC-TEDQIQEEVSKFIAMLY 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G + ++ + P + D + Sbjct: 405 DVYADFGFTDVIVKLSTRPEQR-----------------VGTDQEWDKAEAALADALKAN 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + L D L + + ++ A + Sbjct: 448 SIQFEYQPGEGAFYGPKLEF---TLKDCLERHWQCGTIQVDFSMPGRLD--------AEY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G+ + +G++ ++ + +P +AP + ++NI Sbjct: 497 VAESGERETPVMLHRAILGSLERFIGILI---EEFAGKFPAWLAPTQAVVMNITDK---Q 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D C+K+ L G V D E+IG + L P ++VG + V ++ V ++ R Sbjct: 551 ADFCQKVVESLKNKGFRVNSDLRNEKIGFKIREQTLARVPFLLVVGDREVENNHVAVRTR 610 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 MS+E + Sbjct: 611 DGEDLGSMSIEAFAELLEAEVTKR 634 >gi|326574765|gb|EGE24699.1| threonyl-tRNA synthetase [Moraxella catarrhalis O35E] Length = 639 Score = 262 bits (670), Expect = 7e-68, Method: Composition-based stats. Identities = 81/447 (18%), Positives = 151/447 (33%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E RD L L + + + G+ W P G + +R+ Sbjct: 226 KQLKAYLQRLEEAEKRDHRKIGKALNLF--HMQEQAPGMVFWHPNGWTIWQVLEQYMRKV 283 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q G +E+ P + LW +SG +D+Y EM+ + P + +F Sbjct: 284 QKDNGYLEIKTPQIVDRSLWEKSGHWDNY-GEMMFTTASEKRDYAIKPMNCPCHVQVFNQ 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F + + + Sbjct: 343 GLKSYRDLPLRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTNAQIRQEA-LNFIK 401 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L ++ G I M+ + P + E D + Sbjct: 402 LTLDVYKDFGFDHIQMKLSTRPEKRVGADE-----------------LWDLAEQALADAL 444 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D+ + A Y + L D + + ++ F + ++ Sbjct: 445 DNAGLDWELQAGEGAFYGPKIEF---SLQDCIGRVWQCGTLQLD----FNLPER----LN 493 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A F G G+ + +G+ ++ + G W +++ Sbjct: 494 AEFVGESGERERPVMLHRAILGSFERFIGILIEHYAGLFPTWLAPQQVVVMNIT------ 547 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D+ + ++L+ G D E+IG + L P +I+G K V V + Sbjct: 548 DKQADSVGDVVSKLNAKGYRAISDLRNEKIGFKIRERTLERIPFMLILGDKEVESGTVNV 607 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R M+L++ I Sbjct: 608 RTRTGDNLGSMNLDDFIKILDGAIEKK 634 >gi|294636227|ref|ZP_06714641.1| threonine--tRNA ligase [Edwardsiella tarda ATCC 23685] gi|291090484|gb|EFE23045.1| threonine--tRNA ligase [Edwardsiella tarda ATCC 23685] Length = 622 Score = 262 bits (670), Expect = 7e-68, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 144/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + A +R + Sbjct: 212 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKAYQ 269 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y M ++ P + IF +KSY Sbjct: 270 YQEVKGPFMMDRVLWEKTGHWENYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 328 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 329 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNSCIKMVYDM 387 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 388 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------IWDRAEEDLAAALEENGI 430 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ F + ++A++ G Sbjct: 431 PFEYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGR----LNASYVG 479 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + V + +G+M ++ G W V +++ + Sbjct: 480 ENNERVVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQAVVMNIT------DSQAE 533 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E++ +L G D E+IG + L P ++ G K V KV ++ R Sbjct: 534 YVEELNKKLQAAGIRAKSDLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 593 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS+++VI + Sbjct: 594 KDLGVMSIDDVIEKLLQEIRSR 615 >gi|50086067|ref|YP_047577.1| threonyl-tRNA synthetase [Acinetobacter sp. ADP1] gi|73919764|sp|Q6F860|SYT_ACIAD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|49532043|emb|CAG69755.1| threonyl-tRNA synthetase [Acinetobacter sp. ADP1] Length = 640 Score = 262 bits (670), Expect = 7e-68, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 141/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD L L + + + G+ W G + +R+ Q G Sbjct: 231 YIKRIEEAEKRDHRKIGKALDLF--HMQEEAPGMVFWHANGWTIYQALEQYMRKVQQDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +Y + M + P + +F +KSY Sbjct: 289 YQEVRTPQIVDFTLWEKSGHAANYAENMFT-THSESRNYAVKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F D + F + K L + Sbjct: 348 RDLPVRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDGHIFCTKEQIGKE-VADFIQLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + M+ + P D S D Sbjct: 407 YKDFGFEDVQMKLSTRPEKR-----------------VGDDRLWDLAEKSLADALDAAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + + A+F Sbjct: 450 EWELQPGEGAFYGPKIEF---SLKDCLGRVWQCGTIQCDFNLPIRLD--------ASFVT 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + + +G+ ++ + P +AP + ++NI + Sbjct: 499 EDNERDQPVMLHRAILGSFERFIGILI---EHYAGFMPPWLAPVQACVMNITDS---QAE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 AC+++ A+L + G D E+IG + L P +++G + V + V ++ R Sbjct: 553 ACQQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS++ ++ + Sbjct: 613 KNLGTMSIDAFVDLVKSAVAER 634 >gi|326571308|gb|EGE21325.1| threonyl-tRNA synthetase [Moraxella catarrhalis BC8] Length = 639 Score = 262 bits (670), Expect = 7e-68, Method: Composition-based stats. Identities = 81/447 (18%), Positives = 151/447 (33%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E RD L L + + + G+ W P G + +R+ Sbjct: 226 KQLKAYLQRLEEAEKRDHRKIGKALNLF--HMQEQAPGMVFWHPNGWTIWQVLEQYMRKV 283 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q G +E+ P + LW +SG +D+Y EM+ + P + +F Sbjct: 284 QKDNGYLEIKTPQIVDRSLWEKSGHWDNY-GEMMFTTASEKRDYAIKPMNCPCHVQVFNQ 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F + + + Sbjct: 343 GLKSYRDLPLRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTNAQIRQEA-LNFIK 401 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L ++ G I M+ + P + E D + Sbjct: 402 LTLDVYKDFGFDHIQMKLSTRPEKRVGADE-----------------LWDLAEQALADAL 444 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D+ + A Y + L D + + ++ F + ++ Sbjct: 445 DNAGLDWELQAGEGAFYGPKIEF---SLQDCIGRVWQCGTLQLD----FNLPER----LN 493 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A F G G+ + +G+ ++ + G W +++ Sbjct: 494 AEFVGESGERERPVMLHRAILGSFERFIGILIEHYAGLFPTWLAPQQVVVMNIT------ 547 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D+ + ++L+ G D E+IG + L P +I+G K V V + Sbjct: 548 DKQADSVGDVVSKLNAKGYRAISDLRNEKIGFKIRERTLERIPFMLILGDKEVESGTVNV 607 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R M+L++ I Sbjct: 608 RTRTGDNLGSMNLDDFIKILDGAIEKK 634 >gi|194289383|ref|YP_002005290.1| threonyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424] gi|238692758|sp|B3R4J1|SYT_CUPTR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|193223218|emb|CAQ69223.1| threonine tRNA synthetase [Cupriavidus taiwanensis LMG 19424] Length = 635 Score = 262 bits (670), Expect = 7e-68, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 147/444 (33%), Gaps = 41/444 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD L L + + + G+ W P G + V +R Sbjct: 229 EAYLHMLEEAEKRDHRKLGKTLDLF--HLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLTD 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW +SG + +Y + M + + + P + IF ++ Sbjct: 287 AGYDEVRTPQVMDRSLWEKSGHWQNYKENMF-VTESEKRDYAIKPMNCPGHVQIFNHGLR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F+ DA+ F + + Sbjct: 346 SYRDLPLRLAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEEQIVAEA-KAFNELAF 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G K + ++ P S E A+ G + +P E Sbjct: 405 SVYDDFGFKDVKVKLSLRPDQRAGSDEIWDHAEEGLRLALRACGVEWEELPGE------- 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + H + D++ + + +++ G A + Sbjct: 458 ----------GAFYGPKVEYH---IKDAIGRSWQCGTLQLDLVLPERLG--------AEY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D + +G+ ++ +H G W +++ Sbjct: 497 VSEDNSRKRPVMLHRAILGSFERFLGILLENHAGALPAWLAPDQVVVMNIA------DSQ 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + E + L K G D E+I + L P ++VG K ++V ++ R Sbjct: 551 AEYAESVVQLLQKQGFRAKADLRNEKITYKIREHSLQKVPYLLVVGDKERDANQVAVRAR 610 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 M + + H ++ Sbjct: 611 GNVDLGVMPVSAFVERLQHDVASK 634 >gi|242239483|ref|YP_002987664.1| threonyl-tRNA synthetase [Dickeya dadantii Ech703] gi|242131540|gb|ACS85842.1| threonyl-tRNA synthetase [Dickeya dadantii Ech703] Length = 642 Score = 262 bits (670), Expect = 7e-68, Method: Composition-based stats. Identities = 78/445 (17%), Positives = 144/445 (32%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S Y + + RD +L L + + + G+ W G + A +R + Sbjct: 229 LSAYLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEAFVRMKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + LW ++G +++Y + M ++ P + IF + Sbjct: 287 EYQYQEVKGPFMMDRVLWEKTGHWENYKEAMFT-TSSENREYCIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F + N Sbjct: 346 KSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRTE-VNSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G + I ++ + P S E D + Sbjct: 405 YDMYGTFGFEKIAVKLSTRPEKRIGSDE-----------------MWDRAEEDLAAALTE 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 A Y + L D L + ++ F + ++A+ Sbjct: 448 NGIPFEYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGR----LNAS 496 Query: 302 FKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G + + V + +G+M ++ G W V +++ Sbjct: 497 YVGENNERQVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ +L G V D E+IG + L P ++ G K V KV ++ Sbjct: 551 QSDYVSELTRKLQDAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R + + EVIN + Sbjct: 611 RRGKDLGSIDVSEVINKLQEEIRSR 635 >gi|71908290|ref|YP_285877.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Dechloromonas aromatica RCB] gi|123733181|sp|Q47CM4|SYT_DECAR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|71847911|gb|AAZ47407.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Dechloromonas aromatica RCB] Length = 638 Score = 262 bits (670), Expect = 7e-68, Method: Composition-based stats. Identities = 71/442 (16%), Positives = 145/442 (32%), Gaps = 41/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD + L + + G+ W P G + +R G Sbjct: 231 YLHMLEEAEKRDHRRLGKQYDLF--HMQDEAPGLVFWHPKGWAIWQEIEGYMRAVYRNNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG ++ Y M ++ P + +F + ++SY Sbjct: 289 YQEVRCPQILDKSLWEKSGHWEHYKDNMFT-TSSENRDYAVKPMNCPGHVQVFNAGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + + R+E G+MR R F+ D + F T + + ++ Sbjct: 348 RELPLRYGEFGSCHRNEPAGALHGLMRVRGFVQDDGHIFC-TEDQIESEVTAFNALVKKV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + ++ P + D D + Sbjct: 407 YADFGFNDVAVKLALRPDSR-----------------VGADDVWDRAEDALRQGLRASGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + + A Y + H + D++ + + ++ G A + G Sbjct: 450 EWTELPGEGAFYGPKIEFH---IRDAIGRSWQCGTMQVDFSMPGRLG--------AEYVG 498 Query: 305 -ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G++ ++ + G +W V +++ + D Sbjct: 499 ADDTRKVPVMLHRAILGSLERFIGILIENFAGALPLWLAPVQVVVLNI------SEKQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G D E+I + L P Q++VG K +D V ++ R Sbjct: 553 YAAEVAQKLHSAGFRAEADLRNEKITYKIREHSLNRLPYQLVVGDKEKADGLVAVRTRGG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M ++ +I Sbjct: 613 QDLGQMPVDVLIKRLQEEVVAR 634 >gi|289548737|ref|YP_003473725.1| threonyl-tRNA synthetase [Thermocrinis albus DSM 14484] gi|289182354|gb|ADC89598.1| threonyl-tRNA synthetase [Thermocrinis albus DSM 14484] Length = 645 Score = 262 bits (670), Expect = 7e-68, Method: Composition-based stats. Identities = 87/442 (19%), Positives = 161/442 (36%), Gaps = 39/442 (8%) Query: 8 LPILQENPR-DAEIASHKLMLRTGMIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 L +E R D +L + MI + G+ WLP G + REE + G Sbjct: 233 LRFYEEVKRRDHRKLGKELEMF--MIDEEIGAGLVIWLPKGGIYRKVLEDYWREEHLKRG 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +A LW +SG D Y + M + D+ P + I++S ++SY Sbjct: 291 YQLVYTPHIGNAKLWQKSGHLDHYRQNMFPPMELEDEEYFVKPMNCPFHIAIYKSKVRSY 350 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LPF ++ +R E+ G+MR R F DA+ P+ + + + Sbjct: 351 RDLPFRLAELGTVYRYEMSGVLHGLMRVRGFTQDDAHIICR-PDQVDDVIQETLDFAISM 409 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G EF V T S + + + + + Sbjct: 410 LRDFGFD-----------------EFKVYISTKPEDAIGSDEQWEKAESALKKAVESMGL 452 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y DV K+ D+L + S + F ++ + Sbjct: 453 EYEIDEGGGAFYGPKIDV---KIRDALGRLWQCSTIQFD----FNLPERFDMEY---VGP 502 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + + + +G++ V+ H G W V + + + + Sbjct: 503 DNRRHRPYMIHRAILGSIERFTGVLLEHHAGLLPFWLAPVQVRVLPVQ------ERHVEY 556 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + L + G V D+ E++G++ A+L P +IVG K + D V ++ + G Sbjct: 557 ARSVANTLREEGFRVEVDERDERLGAKIRDAELQKIPYVLIVGDKEMQDGSVSVRGKREG 616 Query: 425 IREDMSLEEVINYASHRFSNNR 446 MSL++++++ + + Sbjct: 617 DLGKMSLQDLLSFLRSANTKRQ 638 >gi|16800662|ref|NP_470930.1| threonyl-tRNA synthetase [Listeria innocua Clip11262] gi|22654125|sp|Q92BF5|SYT_LISIN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|16414081|emb|CAC96825.1| threonyl-tRNA synthetase [Listeria innocua Clip11262] gi|313618753|gb|EFR90658.1| threonyl-tRNA synthetase [Listeria innocua FSL S4-378] Length = 640 Score = 262 bits (670), Expect = 7e-68, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 166/441 (37%), Gaps = 32/441 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 F+ + +E RD +L L I + +G+ WLP G + I +++ R G Sbjct: 230 FIQMQKEAKERDHRKLGKELDLFANSI-EVGQGLPLWLPKGATIRRVIERYIVDKEERLG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I SY Sbjct: 289 YNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 R LP ++ + R E+ ++ + + + P+ K + ++ L ++ Sbjct: 349 RELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIIS 244 +K R D T+ + D M + + D++ Sbjct: 409 KDFDIKDYSFRLS--------------YRDPKNTEKYFDDDAMWEKAQAMLKSAMDEMNM 454 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ ++ + + +S ++ F ++ T+ G Sbjct: 455 DYFEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LTYIG 503 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H + G + + + + +P +AP ++ LI + A D Sbjct: 504 EDGEKHRPVVIHR--GVVSTMERFVAYLIEEYKGAFPTWLAPVQMELIPVNA--DAHLDY 559 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + +L + G DD E++G + A P +++G + V V ++ + Sbjct: 560 AKGVQDKLQRAGLRAEVDDRNEKLGYKIREAQTKKIPYALVLGDQEVEAGSVNVRRYGSK 619 Query: 425 IREDMSLEEVINYASHRFSNN 445 E M L+ I S Sbjct: 620 DSETMDLDAFIAQVVAEVSKY 640 >gi|317471544|ref|ZP_07930893.1| threonyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA] gi|316900979|gb|EFV22944.1| threonyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA] Length = 539 Score = 262 bits (670), Expect = 7e-68, Method: Composition-based stats. Identities = 91/442 (20%), Positives = 158/442 (35%), Gaps = 41/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L M+ G +LP G + + RE N+ G Sbjct: 126 YLTMMEEAKKRDHRKLGKELGLF--MMRDEGPGFPFFLPNGMVLKNTLLDYWREIHNKAG 183 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+S P + S LW SG +D Y + M +++ P + +++S +SY Sbjct: 184 YVEISSPIMLSRHLWETSGHWDHYQENMYT-TVIDEEDFAIKPMNCPGGVLVYQSEPRSY 242 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R E + G+MR R F DA+ F + + Sbjct: 243 RDLPLRMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMMPEQIKDEI----------- 291 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + A + ++ V T S + + S + DD+ Sbjct: 292 --------KGVAALIDQVYSLFGFKYHVELSTRPEDSMGSDEDWEMATDSLRSALDDLGL 343 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H E DS+ + ++ F ++ L + G Sbjct: 344 DYVVNEGDGAFYGPKIDFHLE---DSIGRTWQCGTIQLD----FQLPLRFDLH----YTG 392 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + G++ ++ G W +AP ++ +I I + Sbjct: 393 ADGEKHRPIMIHRVAFGSIERFIGILIEHFAGAFPTW---LAPVQVKVIPISDKH---LE 446 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L G D E++G + A L P ++VG K + V ++ R Sbjct: 447 YGTKVLDALKAAGIRAEIDTRAEKMGYKIREAQLHKIPYMLVVGGKEEENQAVSVRSRFK 506 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G MSL++ I Sbjct: 507 GDEGQMSLDDFICAIRKEIETK 528 >gi|299822779|ref|ZP_07054665.1| threonine--tRNA ligase [Listeria grayi DSM 20601] gi|299816308|gb|EFI83546.1| threonine--tRNA ligase [Listeria grayi DSM 20601] Length = 640 Score = 262 bits (670), Expect = 8e-68, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 165/442 (37%), Gaps = 32/442 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K FL + +E RD +L L + + +G+ WLP G + I + + R Sbjct: 228 KAFLKMQEEAKERDHRKLGKELGLFA-ISQEVGQGLPLWLPKGATIRRVIERYIVDREER 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + D + +SG +D Y ++M +++ ++ P + ++++ I Sbjct: 287 LGYSHVYTPIMAKVDFYKQSGHWDHYHEDMFPPMKMDNEELVLRPMNCPHHMMVYKNDIH 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ L R E+ ++ + + + P+ K + ++ L Sbjct: 347 SYRELPIRIAELGLMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVLELILA 406 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDI 242 ++ + R D T+ + D + D++ Sbjct: 407 VYKDFDITDYKFRLS--------------YRDPENTEKYFDDDAMWEKAQTMLKDAMDEM 452 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ ++ + + +S ++ F ++ T+ Sbjct: 453 EMDYFEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LTY 501 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG+ H + G + + + + +P +AP ++ +I + Sbjct: 502 IGEDGEKHRPVVIHR--GVVSTMERFVAYLIEEYKGAFPTWLAPIQMQIIPVNR--DAHF 557 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D +++ +L + G V DD E++G + A P ++VG + + V I+ Sbjct: 558 DYAKEVEDKLVRAGLRVEIDDRNEKLGYKIREAQTQKIPYALVVGDQESENGTVNIRRYG 617 Query: 423 TGIREDMSLEEVINYASHRFSN 444 + E +S+++ I + Sbjct: 618 SKDSETLSVDDFIKQVVAEVNK 639 >gi|289422357|ref|ZP_06424203.1| threonine--tRNA ligase [Peptostreptococcus anaerobius 653-L] gi|289157192|gb|EFD05811.1| threonine--tRNA ligase [Peptostreptococcus anaerobius 653-L] Length = 641 Score = 262 bits (670), Expect = 8e-68, Method: Composition-based stats. Identities = 81/444 (18%), Positives = 159/444 (35%), Gaps = 42/444 (9%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD +L L MI + G +LP G ++ E Sbjct: 229 EAYLKMLEEAKKRDHRKIGKELGLF--MIPEEGPGFPLFLPRGTALKQSLMKYWEEIHRE 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 +E+ P + + LW SG + Y + M + +++ P + ++S + Sbjct: 287 AHYVEIETPIILNRKLWETSGHWFHYKENMYTVQ-IDEEDYAIKPMNCPGAMLYYKSQLH 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+ P + R EL G+MR R F DA+ F L + + Sbjct: 346 SYRDFPMRVGERGRVHRHELSGALHGLMRVRAFTQDDAHIFMLPEQIRDE-IKGVVNLID 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +++ + G + + P + E +A+ G +++ Sbjct: 405 KVYTKFGFSY-HVELSTRPEDSMGTDEEWAIAEDG-----------------LRGALEEL 446 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + E A Y D H + R + G I + AT+ Sbjct: 447 GMDYIVNEGDGAFYGPKIDFHL----------RDCIGRTWQCGTI-QLDMQLPQRFDATY 495 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DG+ H + +G++ ++ ++ GK +W + + + Sbjct: 496 VGKDGEKHRPIMIHRVALGSIERFIGILIENYAGKFPVW------LAPCQVKVLSVSDKY 549 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + +++ +L G V DD E++G + A L P ++VG K + + ++ R Sbjct: 550 NEFAKELVEKLFDAGIRVELDDRAEKVGFKIREAQLEKIPYMLVVGEKEMESGLLSVRSR 609 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 G MS++E + + + Sbjct: 610 DEGELGQMSIDEFLAKIKKQIEDR 633 >gi|330829614|ref|YP_004392566.1| Threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Aeromonas veronii B565] gi|328804750|gb|AEB49949.1| Threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Aeromonas veronii B565] Length = 642 Score = 262 bits (670), Expect = 8e-68, Method: Composition-based stats. Identities = 82/447 (18%), Positives = 150/447 (33%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E RD +L L + + + G+ W G + IR + Sbjct: 227 KQLKAYLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELETFIRGK 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 E+ P + LW SG ++ Y + M ++ P + IF Sbjct: 285 LKEYDYQEVKGPFMMDRVLWERSGHWEKYAQAMFT-TQSENREYAIKPMNCPGHVQIFNQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F + + + + Sbjct: 344 GLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIMEEVSGCIRM 403 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y G ++I ++ + P S E D + Sbjct: 404 VYDVYGT-FGFENIVVKLSTRPEQRIGSDE-----------------MWDRAEKALAEAL 445 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + A Y + L D L + ++ G Sbjct: 446 ELNGLKYDLQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFALPGRLG-------- 494 Query: 300 ATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 AT+ G + H V + +G++ ++ + ++P +AP + ++NI + Sbjct: 495 ATYVGENNDRHVPVMIHRAILGSIERFIGILT---EEYAGLFPTWLAPTQAVVMNITDN- 550 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D K+ L+ G D E+IG + L P ++ G K V K+ + Sbjct: 551 --QADYAVKVAKALNDAGLRAKADLRNEKIGFKIREHTLKRVPFMLVCGDKEVEAGKIAV 608 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R +EE I + Sbjct: 609 RTRKGADLGTYPVEEFIALLTQEVQTR 635 >gi|268596339|ref|ZP_06130506.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae FA19] gi|268550127|gb|EEZ45146.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae FA19] Length = 638 Score = 262 bits (670), Expect = 8e-68, Method: Composition-based stats. Identities = 81/441 (18%), Positives = 158/441 (35%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 232 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 290 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 349 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + +R P S + A+ G + + +P E Sbjct: 408 YKQFGFHDVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + + D+L + + ++ F + + A + Sbjct: 459 --------GAFYGPKIEYR---VKDALGRSWQCGTLQLD----FVLPER----LDAEYVT 499 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 500 ENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L G D E+IG + FP Q+++G K ++KV ++ R Sbjct: 554 YCREVAAKLQAAGFRAELDLRNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVR-RKA 612 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 613 EDLGSLDLDDFIAQLQQEITD 633 >gi|46907789|ref|YP_014178.1| threonyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|47093096|ref|ZP_00230873.1| threonyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] gi|217964294|ref|YP_002349972.1| threonyl-tRNA synthetase [Listeria monocytogenes HCC23] gi|226224160|ref|YP_002758267.1| threonyl-tRNA synthetase [Listeria monocytogenes Clip81459] gi|254824382|ref|ZP_05229383.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|254852182|ref|ZP_05241530.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|254931499|ref|ZP_05264858.1| threonyl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|255520160|ref|ZP_05387397.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J1-175] gi|290893960|ref|ZP_06556936.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J2-071] gi|300764775|ref|ZP_07074765.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL N1-017] gi|67461796|sp|Q71ZA9|SYT_LISMF RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783526|sp|B8DHI9|SYT_LISMH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|259516560|sp|C1KVK6|SYT_LISMC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|46881058|gb|AAT04355.1| threonyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|47018536|gb|EAL09292.1| threonyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] gi|217333564|gb|ACK39358.1| threonyl-tRNA synthetase [Listeria monocytogenes HCC23] gi|225876622|emb|CAS05331.1| threonyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605487|gb|EEW18095.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|290556498|gb|EFD90036.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J2-071] gi|293583051|gb|EFF95083.1| threonyl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|293593617|gb|EFG01378.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|300514451|gb|EFK41508.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL N1-017] gi|307571140|emb|CAR84319.1| thrS [Listeria monocytogenes L99] gi|313608610|gb|EFR84472.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL F2-208] gi|328465594|gb|EGF36823.1| threonyl-tRNA synthetase [Listeria monocytogenes 1816] gi|332312001|gb|EGJ25096.1| Threonyl-tRNA synthetase [Listeria monocytogenes str. Scott A] Length = 640 Score = 262 bits (669), Expect = 8e-68, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 166/441 (37%), Gaps = 32/441 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 F+ + +E RD +L L I + +G+ WLP G + I +++ R G Sbjct: 230 FIQMQKEAKERDHRKLGKELDLFANSI-EVGQGLPLWLPKGATIRRVIERYIVDKEERLG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I SY Sbjct: 289 YNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 R LP ++ + R E+ ++ + + + P+ K + ++ L ++ Sbjct: 349 RELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIIS 244 +K R D T+ + D M + + D++ Sbjct: 409 KDFDIKDYSFRLS--------------YRDPKNTEKYFDDDAMWEKAQAMLKSAMDEMEM 454 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ ++ + + +S ++ F ++ T+ G Sbjct: 455 DYFEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LTYIG 503 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H + G + + + + +P +AP ++ LI + A D Sbjct: 504 EDGEKHRPVVIHR--GVVSTMERFVAYLIEEYKGAFPTWLAPVQMELIPVNA--DAHLDY 559 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + +L + G DD E++G + A P +++G + V V ++ + Sbjct: 560 AKGVQDKLQRAGLRAEVDDRNEKLGYKIREAQTKKIPYALVLGDQEVEAGSVNVRRYGSK 619 Query: 425 IREDMSLEEVINYASHRFSNN 445 E M L+ I S Sbjct: 620 DSETMDLDAFIAQVVAEVSKY 640 >gi|254831960|ref|ZP_05236615.1| threonyl-tRNA synthetase [Listeria monocytogenes 10403S] Length = 640 Score = 262 bits (669), Expect = 8e-68, Method: Composition-based stats. Identities = 77/441 (17%), Positives = 166/441 (37%), Gaps = 32/441 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 F+ + +E RD +L L I + +G+ WLP G + I +++ R G Sbjct: 230 FIQMQKEAKERDHRKLGKELDLFANSI-EVGQGLPLWLPKGATIRRVIERYIVDKEERLG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I SY Sbjct: 289 YNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 R LP ++ + R E+ ++ + + + P+ K + ++ L ++ Sbjct: 349 RELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIIS 244 +K R D T+ + D M + + D++ Sbjct: 409 KDFDIKDYSFRLS--------------YRDPKNTEKYFDDDAMWEKAQAMLKSAMDEMEM 454 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ ++ + + +S ++ F ++ T+ G Sbjct: 455 DYFEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LTYIG 503 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H + G + + + + +P +AP ++ +I + A D Sbjct: 504 EDGEKHRPVVIHR--GVVSTMERFVAYLIEEYKGAFPTWLAPVQMEIIPVNA--DAHLDY 559 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + +L + G DD E++G + A P +++G + V V ++ + Sbjct: 560 AKGVQDKLQRAGLRAEVDDRNEKLGYKIREAQTKKIPYALVLGDQEVEAGSVNVRRYGSK 619 Query: 425 IREDMSLEEVINYASHRFSNN 445 E M L+ I S Sbjct: 620 DSETMDLDAFIAQVVAEVSKY 640 >gi|271500480|ref|YP_003333505.1| threonyl-tRNA synthetase [Dickeya dadantii Ech586] gi|270344035|gb|ACZ76800.1| threonyl-tRNA synthetase [Dickeya dadantii Ech586] Length = 642 Score = 262 bits (669), Expect = 9e-68, Method: Composition-based stats. Identities = 79/445 (17%), Positives = 142/445 (31%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S Y + + RD +L L + + + G+ W G + A +R + Sbjct: 229 LSAYLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEAFVRMKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + LW ++G +++Y + M ++ P + IF + Sbjct: 287 EYQYQEVKGPFMMDRVLWEKTGHWENYKEAMFT-TSSENREYCVKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F + N Sbjct: 346 KSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRDE-VNSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G + I ++ + P S D D + Sbjct: 405 YDMYSTFGFEKIVVKLSTRPEKR-----------------IGSDDMWDRAEEDLAAALTE 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 A Y + L D L + ++ F + S A+ Sbjct: 448 NAIPFEYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGRLS----AS 496 Query: 302 FKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G + + V + +G+M ++ G W V +++ Sbjct: 497 YVGENNERQVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQAVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ +L G V D E+IG + L P ++ G K V KV ++ Sbjct: 551 QSDYVSELTRKLQDAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R M + EVI + Sbjct: 611 RRGKDLGSMDVSEVITKLQEEIRSR 635 >gi|114319929|ref|YP_741612.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Alkalilimnicola ehrlichii MLHE-1] gi|122312208|sp|Q0AAL5|SYT_ALHEH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|114226323|gb|ABI56122.1| Ser-tRNA(Thr) hydrolase [Alkalilimnicola ehrlichii MLHE-1] Length = 641 Score = 262 bits (669), Expect = 9e-68, Method: Composition-based stats. Identities = 78/445 (17%), Positives = 150/445 (33%), Gaps = 41/445 (9%) Query: 2 RRSKYFLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L + RD L + + + G+ W P G + V IR Sbjct: 226 KQLKAYLHRLAEAEKRDHRRIGRAQNLF--HLQEEAPGMAFWHPKGWQIYLEVQEYIRRL 283 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E+ P L LW +SG +D + M + + + P + ++ Sbjct: 284 TRGHGYQEIHTPQLVDRSLWEKSGHWDKFQDNMF-ITESESRDYAVKPMNCPCHVQVYNQ 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F+ DA+ F T + + Sbjct: 343 GLKSYRDLPLRLAEFGSCHRNEPSGTLHGLMRVRNFVQDDAHIFC-TEDQIQQEVADFID 401 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + ++ G + + + P + D + Sbjct: 402 LVFKAYNDFGFDDVIIALSTRP-----------------DERVGEDALWDKAEHALEEAL 444 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + A Y + L D L ++ ++ G Sbjct: 445 NRAGLEWQLQPGEGAFYGPKIEF---TLKDCLGRTWQLGTIQVDFSMPGRLG-------- 493 Query: 300 ATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 AT+ DG V + +G++ ++ + P +AP + ++NI Sbjct: 494 ATYVAEDGSKKVPVMLHRAILGSLERFIGILI---EHYAGALPPWLAPVQAVVLNITDR- 549 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + +I R + G V D E+IG + L P ++VG K V ++ V + Sbjct: 550 --QGEYARRIEKRFRERGLRVDADLRNEKIGFKIREHTLQKVPYMLVVGDKEVENNTVAV 607 Query: 419 KHRLTGIREDMSLEEVINYASHRFS 443 + R M++++ + + Sbjct: 608 RTREGQDLGSMAVDDFLQRLESEIA 632 >gi|315303326|ref|ZP_07873955.1| threonyl-tRNA synthetase [Listeria ivanovii FSL F6-596] gi|313628306|gb|EFR96810.1| threonyl-tRNA synthetase [Listeria ivanovii FSL F6-596] Length = 640 Score = 262 bits (669), Expect = 9e-68, Method: Composition-based stats. Identities = 77/441 (17%), Positives = 166/441 (37%), Gaps = 32/441 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 F+ + +E RD +L L T I + +G+ WLP G + I +++ R G Sbjct: 230 FIQMQKEAKERDHRKLGKELELFTNSI-EVGQGLPLWLPKGATIRRVIERYIVDKEERLG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I SY Sbjct: 289 YNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 R LP ++ L R E+ ++ + + + P+ K + ++ L ++ Sbjct: 349 RELPIRIAELGLMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDIIS 244 + R D T+ + D D + D++ Sbjct: 409 KDFDITDYSFRLS--------------YRDPKNTEKYFDDDAMWDKAQTMLKSAMDEMGM 454 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y DV ++ ++ + + +S ++ F ++ T+ Sbjct: 455 DYFEADGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LTYIA 503 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H + G + + + + +P +AP ++ LI + A D Sbjct: 504 EDGEKHRPVVIHR--GVVSTMERFVAYLIEEYKGAFPTWLAPVQMELIPVNA--DAHLDY 559 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + +L + G V DD E++G + A P +++G + + V ++ + Sbjct: 560 AKGVQDKLQRAGLRVEVDDRNEKLGYKIREAQTKKIPYALVLGDQEMESGTVNVRRYGSK 619 Query: 425 IREDMSLEEVINYASHRFSNN 445 E M L++ I S Sbjct: 620 DSETMDLDKFIAQVVAEVSKY 640 >gi|262374878|ref|ZP_06068112.1| threonyl-tRNA synthetase [Acinetobacter lwoffii SH145] gi|262309891|gb|EEY91020.1| threonyl-tRNA synthetase [Acinetobacter lwoffii SH145] Length = 640 Score = 262 bits (669), Expect = 9e-68, Method: Composition-based stats. Identities = 77/439 (17%), Positives = 142/439 (32%), Gaps = 40/439 (9%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 I + RD L L + + + G+ W P G + +R+ Q G E Sbjct: 234 RIEEAEKRDHRKIGKALDLF--HMQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNGYEE 291 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 + P + LW +SG +Y M ++ P + +F +KSYR+L Sbjct: 292 IRTPQVVDFTLWEKSGHAANYADNMFT-THSENRNYAVKPMNCPCHVQVFNQGLKSYRDL 350 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P + R+E G+MR R F DA+ F + L ++ Sbjct: 351 PVRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGPE-VADFIKLTLDVYKD 409 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 G + + M+ + P D S D Sbjct: 410 FGFEEVQMKLSTRPEKR-----------------VGDDKLWDMAEKSLADALDAAGLEWE 452 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 + A Y + L D L + + F + + A++ D Sbjct: 453 LQPGEGAFYGPKIEF---SLKDCLGRVWQCGTIQCD----FNLPER----LDASYVTEDN 501 Query: 308 KDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + +G+ ++ + P +AP + ++NI +ACE Sbjct: 502 DRDQPVMLHRAILGSFERFIGILI---EHYAGFMPPWLAPMQACVMNITDS---QAEACE 555 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + A+L + G D E+IG + L P +++G + V + V ++ R Sbjct: 556 SVVAKLKENGIRAISDLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGTNL 615 Query: 427 EDMSLEEVINYASHRFSNN 445 MS++ ++ + Sbjct: 616 GTMSIDAFVDLVKAAVAER 634 >gi|313623625|gb|EFR93788.1| threonyl-tRNA synthetase [Listeria innocua FSL J1-023] Length = 640 Score = 262 bits (669), Expect = 9e-68, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 166/441 (37%), Gaps = 32/441 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 F+ + +E RD +L L I + +G+ WLP G + I +++ R G Sbjct: 230 FIQMQKEAKERDHRKLGKELDLFANSI-EVGQGLPLWLPKGATIRRVIERYIVDKEERLG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I SY Sbjct: 289 YNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 R LP ++ + R E+ ++ + + + P+ K + ++ L ++ Sbjct: 349 RELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIIS 244 +K R D T+ + D M + + D++ Sbjct: 409 KDFDIKDYSFRLS--------------YRDPKNTEKYFDDDAMWEKAQAMLKSAMDEMHM 454 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ ++ + + +S ++ F ++ T+ G Sbjct: 455 DYFEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LTYIG 503 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H + G + + + + +P +AP ++ LI + A D Sbjct: 504 EDGEKHRPVVIHR--GVVSTMERFVAYLIEEYKGAFPTWLAPVQMELIPVNA--DAHLDY 559 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + +L + G DD E++G + A P +++G + V V ++ + Sbjct: 560 AKGVQDKLQRAGLRAEVDDRNEKLGYKIREAQTKKIPYALVLGDQEVEAGSVNVRRYGSK 619 Query: 425 IREDMSLEEVINYASHRFSNN 445 E M L+ I S Sbjct: 620 DSETMDLDAFIAQVVAEVSKY 640 >gi|104781106|ref|YP_607604.1| threonyl-tRNA synthetase [Pseudomonas entomophila L48] gi|123079219|sp|Q1IC15|SYT_PSEE4 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|95110093|emb|CAK14798.1| threonyl-tRNA synthetase [Pseudomonas entomophila L48] Length = 640 Score = 262 bits (669), Expect = 9e-68, Method: Composition-based stats. Identities = 78/442 (17%), Positives = 144/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + + G+ W G + +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRKIGKQLDLF--HLQEEAPGMVFWHANGWTVYQVLEQYMRQVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW SG + +Y + M ++ P + +F +KSY Sbjct: 289 YQEIKTPQVVDRILWERSGHWSNYAENMFT-TSSENRDYAVKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + K + L + Sbjct: 348 RDLPLRLAEFGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEDQVKKEA-ADFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + M+ + P S E D + ++ Sbjct: 407 YKDFGFTDVAMKLSTRPAKRVGSEE-----------------LWDRAEGALADALNESGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L N + + + A++ Sbjct: 450 EWEYQPGEGAFYGPKIEF---TLRDCLGRNWQCGTLQYDPNLP--------ERLDASYIA 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D V + +G+ ++ + ++P +AP + ++NI D Sbjct: 499 EDNSRVRPVMLHRAILGSFERFIGMLI---EHYAGVFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L+ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FALEVEKALNGSGFRAKSDLRNEKIGFKIREHTLLRVPYLLVIGDREVETQTVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + S S Sbjct: 613 ADLGSMPVAQFAELLSQAVSRR 634 >gi|156934293|ref|YP_001438208.1| hypothetical protein ESA_02124 [Cronobacter sakazakii ATCC BAA-894] gi|156532547|gb|ABU77373.1| hypothetical protein ESA_02124 [Cronobacter sakazakii ATCC BAA-894] Length = 453 Score = 262 bits (669), Expect = 9e-68, Method: Composition-based stats. Identities = 74/442 (16%), Positives = 142/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 43 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQ 100 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 101 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 159 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 160 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDE-VNSCIRMVYDM 218 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P + E D ++ Sbjct: 219 YSTFGFEKIVVKLSTRPEKRIGTDE-----------------MWDRAEADLAVALEENNI 261 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 262 PFEYQPGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 310 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + V + +G+M ++ G W V +++ + Sbjct: 311 ENNERQVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNIT------DSQSE 364 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 365 YVNELTRKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 424 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + +VI + Sbjct: 425 KDLGSLDVNDVIEKLQQEIRSR 446 >gi|154495989|ref|ZP_02034685.1| hypothetical protein BACCAP_00272 [Bacteroides capillosus ATCC 29799] gi|150274872|gb|EDN01928.1| hypothetical protein BACCAP_00272 [Bacteroides capillosus ATCC 29799] Length = 586 Score = 262 bits (669), Expect = 9e-68, Method: Composition-based stats. Identities = 93/442 (21%), Positives = 157/442 (35%), Gaps = 41/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L T M G +LP G + + R+ + G Sbjct: 181 YLQRIEEAKKRDHRKLGKELGLFTLM--DEGPGFPFFLPNGMVLRNTLIDYWRQIHKKYG 238 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+S P + + LW SG +D Y M + + P + ++++ SY Sbjct: 239 YVEISTPMMLNRQLWERSGHWDHYKNNMYT-TVIDGEDFAIKPMNCPGGMLVYKTEPHSY 297 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R EL G+ R R F DA+ F + + V Sbjct: 298 RDLPLRVGELGLVHRHELSGALHGLFRVRCFTQDDAHVFMTREQMKD--VIQETVRLFDE 355 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + + + P + E + D+ Sbjct: 356 VYSTFGLNYTIELSTMPEDHIGTVE-----------------EWERNQDILKNAITDMGK 398 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D H L DSL R + G I ++ + G Sbjct: 399 EFVINEGDGAFYGPKLDFH---LADSLG-------RTWQCGTI-QLDSQLPERFELEYTG 447 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + +G++ VI + +P ++P ++S++ I Sbjct: 448 ADGEKHRPVMIHRVVLGSIERFIGVIT---EHFAGAFPAWLSPVQVSILPITDRTA---Q 501 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ A L K G V D E+IG + A L P +++G K + V +++R Sbjct: 502 YADEVKALLEKAGFRVEVDHRNEKIGKKIREAQLKKVPYMLVLGDKEAEGATVAVRNRAG 561 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G + MSL+E IN Sbjct: 562 GDQGAMSLDEFINILREEVEQK 583 >gi|262281009|ref|ZP_06058792.1| threonyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202] gi|262257909|gb|EEY76644.1| threonyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202] Length = 640 Score = 262 bits (669), Expect = 1e-67, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 145/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD L L + + + G+ W P G + +R+ Q G Sbjct: 231 YIKRIEEAEKRDHRKIGKALDLF--HMQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG +Y M + P + +F +KSY Sbjct: 289 YLEIKTPQIVDFTLWEKSGHAANYADNMFT-THSESRNYAVKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + + L + Sbjct: 348 RDLPIRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGQE-VADFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + M+ + P D S D Sbjct: 407 YKDFGFEEVQMKLSTRPEKR-----------------VGDDALWDMAEKSLADALDAAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + + F + + A++ Sbjct: 450 EWELQPGEGAFYGPKIEF---SLKDCLGRVWQCGTIQCD----FNLPER----LDASYVT 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ + P ++P + ++NI + Sbjct: 499 EDNDRDQPVMLHRAILGSFERFIGILI---EHYAGFMPPWLSPLQACVMNITDS---QAE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ACEK+ A+L + G D E+IG + L P +++G + V + V ++ R Sbjct: 553 ACEKVVAKLKENGLRAISDLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS++ I+ + Sbjct: 613 KNLGTMSVDAFIDLVKSAVAER 634 >gi|299771535|ref|YP_003733561.1| threonyl-tRNA synthetase [Acinetobacter sp. DR1] gi|298701623|gb|ADI92188.1| threonyl-tRNA synthetase [Acinetobacter sp. DR1] Length = 640 Score = 262 bits (669), Expect = 1e-67, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 145/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD L L + + + G+ W P G + +R+ Q G Sbjct: 231 YIKRIEEAEKRDHRKIGKALDLF--HMQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG +Y M + P + +F +KSY Sbjct: 289 YLEIKTPQIVDFTLWEKSGHAANYADNMFT-THSESRNYAVKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + + L + Sbjct: 348 RDLPIRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGQE-VADFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + M+ + P D S D Sbjct: 407 YKDFGFEEVQMKLSTRPEKR-----------------VGDDALWDMAEKSLADALDAAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + + F + + A++ Sbjct: 450 EWELQPGEGAFYGPKIEF---SLKDCLGRVWQCGTIQCD----FNLPER----LDASYVT 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ + P ++P + ++NI + Sbjct: 499 EDNDRDQPVMLHRAILGSFERFIGILI---EHYAGFMPPWLSPLQACVMNITDS---QAE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ACEK+ A+L + G D E+IG + L P +++G + V + V ++ R Sbjct: 553 ACEKVVAKLKENGLRAISDLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS++ I+ + Sbjct: 613 KNLGTMSVDAFIDLVKSAVAER 634 >gi|323692417|ref|ZP_08106653.1| threonine-tRNA ligase [Clostridium symbiosum WAL-14673] gi|323503557|gb|EGB19383.1| threonine-tRNA ligase [Clostridium symbiosum WAL-14673] Length = 645 Score = 262 bits (669), Expect = 1e-67, Method: Composition-based stats. Identities = 85/442 (19%), Positives = 154/442 (34%), Gaps = 42/442 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +++E RD +L L M+H G +LP G + + + R+ + Sbjct: 230 ESYLRMMEEARKRDHRKLGRELGLF--MMHDAGPGFPFFLPKGMELKNTLLEYWRQIHKK 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G +E+S P + + LW SG +D Y M +++ P + + S + Sbjct: 288 AGYVEISTPVILNRKLWETSGHWDHYKDNMYT-TVIDEEDYAIKPMNCPGGVLAYASEPR 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP ++ L R E + G+MR R F DA+ F + K + Sbjct: 347 SYRDLPLRMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPDQIKDE--IKGVAHLI 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + L + + P S E + + D++ Sbjct: 405 NEVYSLFGFKYHVELSTRPEDSMGSDE-----------------DWEMATEGLRSALDEL 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + E A Y D H E DS+ + ++ F ++ + Sbjct: 448 GLDYVVNEGDGAFYGPKIDFHLE---DSIGRTWQCGTIQLD----FQLPQRF----ELEY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 GADG+ H + G++ ++ G W +AP ++ ++ I Sbjct: 497 TGADGEKHRPIMIHRVAFGSIERFIGILIEHFAGAFPTW---LAPVQVKVLPISDK---Y 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D + + L + G D E+IG + A P ++VG K + V ++ R Sbjct: 551 ADYAKTVLEELEEAGIRAELDTRSEKIGYKIREAQTQKIPYMLVVGQKEEEEGNVSVRSR 610 Query: 422 LTGIREDMSLEEVINYASHRFS 443 G S I + Sbjct: 611 FAGDEGSDSTAGFIEKIKKEIA 632 >gi|330810593|ref|YP_004355055.1| Threonine--tRNA ligase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378701|gb|AEA70051.1| Threonine--tRNA ligase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 640 Score = 262 bits (669), Expect = 1e-67, Method: Composition-based stats. Identities = 84/447 (18%), Positives = 148/447 (33%), Gaps = 41/447 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + S G+ W P G + +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRKIGKRLGLF--HTQEESPGMVFWHPNGWTLYQVLEQYMRQVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG + +Y M ++ P + +F +KSY Sbjct: 289 YLEIKTPQVVDRSLWEKSGHWANYADNMFT-TQSENRDYAIKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+E G+MR R F DA+ F + S + + Sbjct: 348 RELPMRLAEFGACHRNEPSGALHGIMRVRAFTQDDAHIFCTEEQMQAES-AAFIKLTMDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + M+ + P S E D + D Sbjct: 407 YRDFGFTEVEMKLSTRPEKRVGSDE-----------------LWDRAEAALAAALDSAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ G A + Sbjct: 450 AYDLQPGEGAFYGPKIEF---SLKDCLGRVWQCGTLQLDFNLPIRLG--------AEYVS 498 Query: 305 ADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + H V + +G+ ++ ++ +P +AP + ++NI D Sbjct: 499 EDNSRKHPVMLHRAILGSFERFVGILIEHYE---GAFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L++ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FAAEVEKTLNQSGFRAKSDLRNEKIGFKIREHTLLKVPFLLVIGDREVEMQTVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN-RPVL 449 M + E + + S RP L Sbjct: 613 ADLGSMPVAEFAEFLAQAVSRRGRPDL 639 >gi|240127689|ref|ZP_04740350.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] Length = 648 Score = 262 bits (669), Expect = 1e-67, Method: Composition-based stats. Identities = 81/441 (18%), Positives = 158/441 (35%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 242 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAG 299 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 300 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 358 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 359 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 417 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + +R P S + A+ G + + +P E Sbjct: 418 YKQFGFHDVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 468 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 469 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LDAEYVT 509 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 510 ENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 563 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L D E+IG + FP Q+++G K ++KV ++ R Sbjct: 564 YCREVAAKLQAADFRAELDLRNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVR-RKA 622 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 623 EDLGSLDLDDFIAQLQQEITD 643 >gi|302325997|gb|ADL25198.1| threonine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 645 Score = 261 bits (668), Expect = 1e-67, Method: Composition-based stats. Identities = 89/436 (20%), Positives = 163/436 (37%), Gaps = 41/436 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L L+E RD ++ L I HS G+ W P G K ++ + IR + +R Sbjct: 239 ETYLKFLEEAEKRDHRKIGKEMDLY--HIEDHSPGMVFWHPKGTKMVNALKDYIRGKIDR 296 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G +E+ P + + LW++SG D Y + M + D M P + IF + ++ Sbjct: 297 RGYLEVITPEIVNKTLWIKSGHADKYNENMFK-TLAGDVEMAVKPMNCPCHIQIFNTGLR 355 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 S+R+LP + R E G+MR R F+ DA+ F + + Sbjct: 356 SWRDLPMRLAEFGKCHRYEPAGTMHGLMRVRGFVQDDAHIFCTEDQIASE-VADFCALVK 414 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 I+H G I ++ + P S E D + Sbjct: 415 EIYHDFGFDDIVVKFSTRPEKRVGSDE-----------------IWDKAEAALAEATKLA 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + L DSL + + ++ G A + Sbjct: 458 GLDYILNPGEGAFYGPKLEF---TLKDSLGRDWQCGTIQVDFNLPQRLG--------AEY 506 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G D + H + +G++ ++ + +P +AP + ++ I + Sbjct: 507 VGKDNQKHIPVMLHRAAVGSIERFLGILI---EEFMGDFPLWLAPVQARVLPI---SEKF 560 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D +++ L G V D+ E++G + +L P +IVG K V+D V ++ R Sbjct: 561 VDYAKQVEKELVNAGVRVEVDESNEKLGYKIRQCELQKVPYLLIVGEKEVADGVVSVRKR 620 Query: 422 LTGIREDMSLEEVINY 437 G + M++ + + Sbjct: 621 KDGDKGSMTVAQFLEM 636 >gi|83748297|ref|ZP_00945322.1| Threonyl-tRNA synthetase [Ralstonia solanacearum UW551] gi|83725029|gb|EAP72182.1| Threonyl-tRNA synthetase [Ralstonia solanacearum UW551] Length = 635 Score = 261 bits (668), Expect = 1e-67, Method: Composition-based stats. Identities = 77/444 (17%), Positives = 148/444 (33%), Gaps = 41/444 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD +L L + + + G+ W P G + V +R Sbjct: 229 EAYLHMLEEAEKRDHRKLGKQLDLF--HLQEEAPGMVFWHPKGWQIWQAVEQYMRGRLAG 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW SG + +Y + M + + + P + IF ++ Sbjct: 287 AGYSEVRTPQVMDRTLWEHSGHWQNYKENMF-VTESEKREYAIKPMNCPGHVQIFNHGLR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F+ DA+ F T Sbjct: 346 SYRDLPLRLAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFC-TEGQIMAEAKDFNDLAF 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G +++ ++ P + E A+ G + +P E Sbjct: 405 SVYEDFGFENVAVKLALRPDKRAGTDEIWDHAEEGLRTALRACGVEWEELPGE------- 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + H + D++ + + +++ G A + Sbjct: 458 ----------GAFYGPKVEYH---IKDAIGRSWQCGTLQLDLVLPERLG--------AEY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D + +G+ ++ +H G +W +S+ Sbjct: 497 VAEDNSRKRPVMLHRAILGSFERFLGILLENHAGALPLWLAPEQVVVMSIA------DAH 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + E + L K G D E+I + L P V+VG K ++V ++ R Sbjct: 551 AEYAETVAQSLQKQGFRASADLRNEKITYKIREHSLQKVPYLVVVGDKERDGNQVAVRAR 610 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 M + + + +N Sbjct: 611 GNVDLGSMPVSAFVERLQNDLANK 634 >gi|268686074|ref|ZP_06152936.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] gi|268626358|gb|EEZ58758.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] Length = 637 Score = 261 bits (668), Expect = 1e-67, Method: Composition-based stats. Identities = 81/441 (18%), Positives = 158/441 (35%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+E N G Sbjct: 231 YIQRIEEAEKRDHRKLGKQLDLF--HLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + W +SG +D+Y M + + P + IF + ++SY Sbjct: 289 YKEVKTPQIMDKTFWEKSGHWDNYKDNMF-VTSSEKREYAVKPMNCPGHVQIFNNGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +RI Sbjct: 348 RDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVSEARAFN-ELLVRI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + +R P S + A+ G + + +P E Sbjct: 407 YKQFGFHDVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACGVEWGELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + + A + Sbjct: 458 --------GAFYGPKIEYH---VKDALGRSWQCGTLQLD----FVLPER----LDAEYVT 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ +H G +W V +++ + D Sbjct: 499 ENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNIT------ENQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C ++ A+L D E+IG + FP Q+++G K ++KV ++ R Sbjct: 553 YCREVAAKLQAADFRAELDLRNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVR-RKA 611 Query: 424 GIREDMSLEEVINYASHRFSN 444 + L++ I ++ Sbjct: 612 EDLGSLDLDDFIAQLQQEITD 632 >gi|261416474|ref|YP_003250157.1| threonyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372930|gb|ACX75675.1| threonyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 695 Score = 261 bits (668), Expect = 1e-67, Method: Composition-based stats. Identities = 89/436 (20%), Positives = 163/436 (37%), Gaps = 41/436 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L L+E RD ++ L I HS G+ W P G K ++ + IR + +R Sbjct: 289 ETYLKFLEEAEKRDHRKIGKEMDLY--HIEDHSPGMVFWHPKGTKMVNALKDYIRGKIDR 346 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G +E+ P + + LW++SG D Y + M + D M P + IF + ++ Sbjct: 347 RGYLEVITPEIVNKTLWIKSGHADKYNENMFK-TLAGDVEMAVKPMNCPCHIQIFNTGLR 405 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 S+R+LP + R E G+MR R F+ DA+ F + + Sbjct: 406 SWRDLPMRLAEFGKCHRYEPAGTMHGLMRVRGFVQDDAHIFCTEDQIASE-VADFCALVK 464 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 I+H G I ++ + P S E D + Sbjct: 465 EIYHDFGFDDIVVKFSTRPEKRVGSDE-----------------IWDKAEAALAEATKLA 507 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + L DSL + + ++ G A + Sbjct: 508 GLDYILNPGEGAFYGPKLEF---TLKDSLGRDWQCGTIQVDFNLPQRLG--------AEY 556 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G D + H + +G++ ++ + +P +AP + ++ I + Sbjct: 557 VGKDNQKHIPVMLHRAAVGSIERFLGILI---EEFMGDFPLWLAPVQARVLPI---SEKF 610 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D +++ L G V D+ E++G + +L P +IVG K V+D V ++ R Sbjct: 611 VDYAKQVEKELVNAGVRVEVDESNEKLGYKIRQCELQKVPYLLIVGEKEVADGVVSVRKR 670 Query: 422 LTGIREDMSLEEVINY 437 G + M++ + + Sbjct: 671 KDGDKGSMTVAQFLEM 686 >gi|325276812|ref|ZP_08142513.1| threonyl-tRNA synthetase [Pseudomonas sp. TJI-51] gi|324098050|gb|EGB96195.1| threonyl-tRNA synthetase [Pseudomonas sp. TJI-51] Length = 640 Score = 261 bits (668), Expect = 1e-67, Method: Composition-based stats. Identities = 78/442 (17%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + + G+ W G + +R Q G Sbjct: 231 YIQRIEEAEKRDHRKIGKQLDLF--HLQEEAPGMVFWHANGWTVYQVLEQYMRGVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW SG + +Y + M + P + +F +KSY Sbjct: 289 YQEIKTPQVVDRILWERSGHWSNYAENMFT-TSSESRDYAVKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + K + L + Sbjct: 348 RDLPLRLAEFGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEEQVKKEA-ADFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I M+ + P S E D + ++ Sbjct: 407 YKDFGFSDIAMKLSTRPAKRVGSEE-----------------LWDRAEGALADALNESGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L N + + + A++ Sbjct: 450 EWEYQPGEGAFYGPKIEF---TLRDCLGRNWQCGTLQYDPNLP--------ERLDASYIA 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D V + +G+ ++ + ++P +AP + ++NI D Sbjct: 499 EDNSRVRPVMLHRAILGSFERFIGMLI---EHYAGVFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L+ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FALQVEKSLNGSGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVETQTVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + + + S Sbjct: 613 ADLGSMPVAQFVELLNQAVSRR 634 >gi|323484406|ref|ZP_08089772.1| hypothetical protein HMPREF9474_01523 [Clostridium symbiosum WAL-14163] gi|323402184|gb|EGA94516.1| hypothetical protein HMPREF9474_01523 [Clostridium symbiosum WAL-14163] Length = 645 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 85/442 (19%), Positives = 153/442 (34%), Gaps = 42/442 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +++E RD +L L M+H G +LP G + + + R+ + Sbjct: 230 ESYLRMMEEARKRDHRKLGRELGLF--MMHDAGPGFPFFLPKGMELKNTLLEYWRQIHKK 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G +E+S P + + LW SG +D Y M +++ P + + S + Sbjct: 288 AGYVEISTPVILNRKLWETSGHWDHYKDNMYT-TVIDEEDYAIKPMNCPGGVLAYASEPR 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP ++ L R E + G+MR R F DA+ F + K + Sbjct: 347 SYRDLPLRMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPDQIKDE--IKGVAHLI 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + L + + P S E + D++ Sbjct: 405 NEVYSLFGFKYHVELSTRPEDSMGSDE-----------------DWEMATEGLRLALDEL 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + E A Y D H E DS+ + ++ F ++ + Sbjct: 448 GLDYVVNEGDGAFYGPKIDFHLE---DSIGRTWQCGTIQLD----FQLPQRF----ELEY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 GADG+ H + G++ ++ G W +AP ++ ++ I Sbjct: 497 TGADGEKHRPIMIHRVAFGSIERFIGILIEHFAGAFPTW---LAPVQVKVLPISDK---Y 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D + + L + G D E+IG + A P ++VG K + V ++ R Sbjct: 551 ADYAKTVLEELEEAGIRAELDTRSEKIGYKIREAQTQKIPYMLVVGQKEEEEGNVSVRSR 610 Query: 422 LTGIREDMSLEEVINYASHRFS 443 G S I + Sbjct: 611 FAGDEGSDSTAGFIEKIKKEIA 632 >gi|146282712|ref|YP_001172865.1| threonyl-tRNA synthetase [Pseudomonas stutzeri A1501] gi|166225484|sp|A4VM22|SYT_PSEU5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|145570917|gb|ABP80023.1| threonyl-tRNA synthetase [Pseudomonas stutzeri A1501] Length = 640 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 81/442 (18%), Positives = 144/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G N+ +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRRIGKQLDLF--HTQEEAPGMVFWHPAGWTLYQNLEQYMRQVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG + +Y + M ++ P + IF +KSY Sbjct: 289 YQEVRTPQVVDRILWEKSGHWSNYAENMFT-TSSENRDYAVKPMNCPCHVQIFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + K + L++ Sbjct: 348 RDLPLRMAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQVKKEA-ADFIKLTLKV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I M+ + P S E D + ++ Sbjct: 407 YADFGFSDIAMKLSTRPAKRVGSDE-----------------LWDRAEGALAEALNESGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L N + + + A++ Sbjct: 450 AWEYQPGEGAFYGPKIEF---TLRDCLGRNWQCGTLQYDPNLP--------ERLDASYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ + +P +AP + ++NI Sbjct: 499 EDNSRQRPVMLHRAILGSFERFIGMLI---EHYAGAFPAWLAPTQAVIMNITDK---QAA 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L + G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FAIEVEKTLVQSGFRAKCDLRNEKIGFKIREHTLLKTPYLLVIGDREVETRSVAVRSREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M LE+ + S Sbjct: 613 VDMGSMPLEQFAQLLAQAVSRR 634 >gi|327481051|gb|AEA84361.1| threonyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166] Length = 640 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 81/442 (18%), Positives = 144/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G N+ +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRRIGKQLDLF--HTQEEAPGMVFWHPAGWTLYQNLEQYMRQVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG + +Y + M ++ P + IF +KSY Sbjct: 289 YQEVRTPQVVDRILWEKSGHWSNYAENMFT-TSSENRDYAVKPMNCPCHVQIFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + K + L++ Sbjct: 348 RDLPLRMAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQVKKEA-ADFIKLTLKV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I M+ + P S E D + ++ Sbjct: 407 YADFGFSDIAMKLSTRPAKRVGSDE-----------------LWDRAESALAEALNESGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L N + + + A++ Sbjct: 450 AWEYQPGEGAFYGPKIEF---TLRDCLGRNWQCGTLQYDPNLP--------ERLDASYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ + +P +AP + ++NI Sbjct: 499 EDNSRQRPVMLHRAILGSFERFIGMLI---EHYAGAFPAWLAPTQAVIMNITDK---QAA 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L + G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FAIEVEKTLVQSGFRAKCDLRNEKIGFKIREHTLLKTPYLLVIGDREVETRSVAVRSREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M LE+ + S Sbjct: 613 VDMGSMPLEQFAQLLAQAVSRR 634 >gi|261339515|ref|ZP_05967373.1| threonine--tRNA ligase [Enterobacter cancerogenus ATCC 35316] gi|288318328|gb|EFC57266.1| threonine--tRNA ligase [Enterobacter cancerogenus ATCC 35316] Length = 622 Score = 261 bits (667), Expect = 2e-67, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 142/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 212 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQ 269 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 270 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 328 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 329 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQVRDE-VNACIRMVYDM 387 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 388 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------TWDRAEADLAVALEENGI 430 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F + S A++ G Sbjct: 431 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPQRLS----ASYVG 479 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G++ ++ G W V +++ D Sbjct: 480 EDNERQVPVMIHRAILGSLERFIGILTEEFAGFFPTWLAPVQVVVMNIT------DSQAD 533 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 534 YVKELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 593 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + EVI + Sbjct: 594 KDLGSLDVSEVIEKLQQEIRSR 615 >gi|262369846|ref|ZP_06063173.1| threonyl-tRNA synthetase [Acinetobacter johnsonii SH046] gi|262314885|gb|EEY95925.1| threonyl-tRNA synthetase [Acinetobacter johnsonii SH046] Length = 640 Score = 261 bits (667), Expect = 2e-67, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD L L + + + G+ W P G + +R+ Q G Sbjct: 231 YIKRIEEAEKRDHRKIGKALDLF--HMQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG +Y M + P + +F +KSY Sbjct: 289 YLEIRTPQVVDFTLWEKSGHAANYADGMFT-THSESRNYAIKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + + L + Sbjct: 348 RDLPIRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGQE-VADFIQLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + M+ + P D S D Sbjct: 407 YKDFGFEDVQMKLSTRPEKR-----------------VGDDALWDMAEKSLADALDAAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + + F + + A++ Sbjct: 450 EWELQPGEGAFYGPKIEF---SLKDCLGRVWQCGTIQCD----FNLPER----LDASYVT 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ + P + P + ++NI + Sbjct: 499 EDNDRDQPVMLHRAILGSFERFIGILI---EHYAGFMPPWLTPIQACVMNITDS---QAE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ACE + A+L + G D E+IG + L P +++G + V + V ++ R Sbjct: 553 ACESVVAKLKENGLRAISDLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS++ ++ + Sbjct: 613 TNLGTMSIDAFVDLVKAAVAER 634 >gi|206580341|ref|YP_002237974.1| threonyl-tRNA synthetase [Klebsiella pneumoniae 342] gi|288934884|ref|YP_003438943.1| threonyl-tRNA synthetase [Klebsiella variicola At-22] gi|290509026|ref|ZP_06548397.1| threonyl-tRNA synthetase [Klebsiella sp. 1_1_55] gi|238065116|sp|B5XQC6|SYT_KLEP3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|206569399|gb|ACI11175.1| threonyl-tRNA synthetase [Klebsiella pneumoniae 342] gi|288889593|gb|ADC57911.1| threonyl-tRNA synthetase [Klebsiella variicola At-22] gi|289778420|gb|EFD86417.1| threonyl-tRNA synthetase [Klebsiella sp. 1_1_55] Length = 642 Score = 261 bits (667), Expect = 2e-67, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 141/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQVRDE-VNACIRMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------TWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F + S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPQRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + V + +G++ ++ G W V +++ + Sbjct: 500 ENNERQVPVMIHRAILGSLERFIGILTEEFAGFFPTWIAPVQVVVMNIT------DSQAE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTRKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 614 KDLGSMDVSEVIEKLQQEIRSR 635 >gi|260597637|ref|YP_003210208.1| threonyl-tRNA synthetase [Cronobacter turicensis z3032] gi|260216814|emb|CBA30296.1| Threonyl-tRNA synthetase [Cronobacter turicensis z3032] Length = 642 Score = 261 bits (667), Expect = 2e-67, Method: Composition-based stats. Identities = 74/442 (16%), Positives = 141/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHVFCTEEQVRDE-VNSCIRMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P + E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGTDE-----------------MWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F + S A++ G Sbjct: 451 PFEYQPGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPARLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + V + +G+M ++ G W V +++ + Sbjct: 500 ENNERQVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNIT------DSQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTRKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + +VI + Sbjct: 614 KDLGSLDVNDVIEKLQQEIRSR 635 >gi|300716458|ref|YP_003741261.1| Threonyl-tRNA synthetase [Erwinia billingiae Eb661] gi|299062294|emb|CAX59411.1| Threonyl-tRNA synthetase [Erwinia billingiae Eb661] Length = 642 Score = 261 bits (667), Expect = 2e-67, Method: Composition-based stats. Identities = 74/442 (16%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLLRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLTEYD 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y + M ++ P + IF +KSY Sbjct: 290 YQEVKGPLMMDRVLWEKTGHWENYKEAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRTE-VNSCIRMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P+ + E D + Sbjct: 408 YSTFGFEKIVVKLSTRPVKRIGTEE-----------------QWDRAEADLAAALKENDI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ F ++ S A++ G Sbjct: 451 PFEYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPSRLS----ASYIG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + V + +G++ ++ + G W V +++ + Sbjct: 500 ENNERQVPVMIHRAILGSVERFIGILTEEYAGFFPTWLAPVQVVVMNIT------DGQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVAELTRKLQNAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 614 KDLGSMDVNEVIAKLQDEIRSR 635 >gi|238895235|ref|YP_002919970.1| threonyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044] gi|238547552|dbj|BAH63903.1| threonyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 642 Score = 261 bits (667), Expect = 2e-67, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 141/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQVRDE-VNACIRMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------TWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F + S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPQRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + V + +G++ ++ G W V +++ + Sbjct: 500 ENNERQVPVMIHRAILGSLERFIGILTEEFAGFFPTWIAPVQVVVMNIT------DSQAE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTRKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 614 KDLGSMDVNEVIEKLQQEIRSR 635 >gi|150389418|ref|YP_001319467.1| threonyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] gi|149949280|gb|ABR47808.1| threonyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] Length = 636 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 80/439 (18%), Positives = 155/439 (35%), Gaps = 41/439 (9%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + + RD +L L + +++ G + P G + + R E + G E Sbjct: 236 RLEEAKKRDHRKIGKELDLFS--LNEEGPGFPFFHPNGMIVRNELENFWRREHTKRGYEE 293 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 + P + + LW +SG +D Y + M + +D P + +++ + SYR+L Sbjct: 294 IKTPIILNEQLWKQSGHWDHYQENM-YFTNIDDANYAVKPMNCPGSILMYKRKMHSYRDL 352 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P ++ L R EL G+MR R F DA+ F L + + + Sbjct: 353 PIRMGELGLVHRHELSGALHGLMRVRCFTQDDAHIFMLPEQIKDE-ILGVMNFVDYFYKV 411 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 G K + P + E D I S ++ Sbjct: 412 FGFKYHI-ELSTRPKDSMGTDE-----------------EWDLAINSLREALEENNVKYK 453 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 + E A Y D H E D++ + ++ F ++ + GADG Sbjct: 454 LNEGDGAFYGPKIDFHLE---DAIGRTWQCGTIQLD----FQMPQRFD----INYVGADG 502 Query: 308 KDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + H + G++ ++ + +P +AP + ++ I + + Sbjct: 503 EKHRPIMIHRVIFGSIERFIGILI---EHYAGKFPAWLAPVQAKILPITDNH---LEYAR 556 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+ ++ + V D+ E+IG + A L P +++G K V V ++ R G Sbjct: 557 KLQQQMLEKDIRVVIDERSEKIGFKIREARLERVPYMLVIGDKEVESETVAVRAREEGEL 616 Query: 427 EDMSLEEVINYASHRFSNN 445 + + I ++ Sbjct: 617 GAVDASKFIGDLVKEIADK 635 >gi|294101704|ref|YP_003553562.1| threonyl-tRNA synthetase [Aminobacterium colombiense DSM 12261] gi|293616684|gb|ADE56838.1| threonyl-tRNA synthetase [Aminobacterium colombiense DSM 12261] Length = 633 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 94/448 (20%), Positives = 162/448 (36%), Gaps = 44/448 (9%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + ++ L+E RD +L L + I G + P G L+ + R+ + Sbjct: 225 QTYITRLEEAKNRDHRKIGKELDLFS--IQPEGPGFPFFHPKGMAILNKLTEFWRQVHEK 282 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW+ SG +D Y M + ++ P + I++S I+ Sbjct: 283 NGYCEIRTPLILDRSLWIRSGHWDHYRDNM-YFTEIDEMPFAIKPMNCPGGILIYKSQIR 341 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP ++ + R E G+MR R F DA+ + TPE K + Sbjct: 342 SYRDLPLRMAELGIVHRHERSGVLHGLMRVRCFTQDDAHLYC-TPEQVKDEIKGIMYLCQ 400 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 I+ + M + P S E +A+T + ++ Sbjct: 401 YIYRDIFGFKYTMELSTRPENSMGSEEQWNIAET-----------------ALKEALEET 443 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y D H E R + G I + TF Sbjct: 444 NMQYRVNPGDGAFYGPKIDFHLED----------CIGRTWQCGTI-QLDFQMPEKFDLTF 492 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 GADGK+H + +G++ ++ G W +AP ++ L+ I + Sbjct: 493 VGADGKEHRPVMLHRTILGSLERFFGILIEQFAGAFPYW---LAPVQVRLLPI---SEDF 546 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D + A+L V D E++G + A + P ++G K V+ +V + R Sbjct: 547 LDYARLVQAKLVANNIRVEIDSRDEKLGKKIRDAQIQKIPYMAVIGEKEVASDQVAPRER 606 Query: 422 LTGIREDMSLEEVINYASHRFSNNRPVL 449 G MS+ I+ + P+L Sbjct: 607 SRGDLGAMSINSFIDVLMEEKN---PLL 631 >gi|15602458|ref|NP_245530.1| threonyl-tRNA synthetase [Pasteurella multocida subsp. multocida str. Pm70] gi|13431883|sp|P57857|SYT_PASMU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|12720863|gb|AAK02677.1| ThrS [Pasteurella multocida subsp. multocida str. Pm70] Length = 643 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 144/445 (32%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LSEYLTRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + LW ++G + +Y +++ ++ P + IF + Sbjct: 287 EYDYQEVKGPFMMDRVLWEKTGHWQNY-GDLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTACIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G ++I ++ + P + E A+ G Sbjct: 405 YDIYSTFGFENIQVKLSTRPEKRIGADEMWDRAEAGLAAALSHN---------------- 448 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L D L + ++ +A+ Sbjct: 449 -GLEYEIQEGEGAFYGPKIEF---ALRDCLDREWQCGTIQLDFALPGRL--------NAS 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ +I + G W +++ Sbjct: 497 YVAEDNDRRTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPTQAIVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ LS G V D E+IG + L P ++ G K + KV ++ Sbjct: 551 QSDYVQKVVKTLSDAGLRVKSDLRNEKIGFKIREHTLRRVPYMLVCGDKEIEAGKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R ++EE ++ + + Sbjct: 611 RKGADLGTFTIEEFLDILKKQVRSR 635 >gi|253996955|ref|YP_003049019.1| threonyl-tRNA synthetase [Methylotenera mobilis JLW8] gi|253983634|gb|ACT48492.1| threonyl-tRNA synthetase [Methylotenera mobilis JLW8] Length = 635 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 70/442 (15%), Positives = 140/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L + + G+ W P G V +R+ G Sbjct: 231 YLFQLEEAEKRDHRKLGKQLDYF--HMQDDAPGMVFWHPRGWSIWQEVEQYMRQMFKSFG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ PT+ LW +SG + +Y M + ++ P + IF + + SY Sbjct: 289 YQEVRTPTVMDKTLWEKSGHWQNYRDNMF-VTSSENREYAVKPMNCPGHVQIFNNQLHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F T + + + Sbjct: 348 RDLPLRLAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIEAEVADFIQMLYKA 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + ++ + P + E D + + Sbjct: 407 YGDFGFNDVLVKLSTRPEKRVGADE-----------------TWDKAEAALANALNANNL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L DSL + ++ G A + Sbjct: 450 AFDLQPGEGAFYGPKIEF---TLKDSLGRLWQCGTIQLDFNLPERLG--------AEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ + P +AP ++ ++NI + D Sbjct: 499 EDNSRQRPVMLHRAIVGSMERFIGILI---ENYAGAMPLWLAPVQVMVLNI---SESQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L + G +D E+I + + P ++ G + + + ++ R Sbjct: 553 YVRQVVETLRQNGIRCEFDLRNEKITYKIREHSMQKMPYLLVAGEREMQAGHLAVRTRKG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M ++ +I Sbjct: 613 EDLGSMPIDALIERLKAEIEAK 634 >gi|237747667|ref|ZP_04578147.1| threonyl-tRNA synthetase [Oxalobacter formigenes OXCC13] gi|229379029|gb|EEO29120.1| threonyl-tRNA synthetase [Oxalobacter formigenes OXCC13] Length = 635 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 72/443 (16%), Positives = 143/443 (32%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD L L + G+ W G V +R G Sbjct: 231 YLHMLEEAEKRDHRRLGRSLDLF--HFQDEAPGLIFWHAKGWTIWQQVEQYMRRVYQENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D+Y + M + ++ P + I+RS++ SY Sbjct: 289 YQEVKGPQILDRSLWEKSGHWDNYKENMFT-TESENRIYALKPMNCPGHVQIYRSNLHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + + R+E G+MR R F D + F + ++ Sbjct: 348 RELPLRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQILDECVAFT-DLLKKV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I + + P S E D + + Sbjct: 407 YQDFGFTDIIYKIATRPEKRVGSDE-----------------AWDKAENALIQSLERSGC 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D++ + ++ G A + Sbjct: 450 SYELSPGDGAFYGPKIEY---TLKDAIGRMWQCGTIQVDFSMPMRLG--------AEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G++ ++ +H G +W V +++ + Sbjct: 499 EDNTRKIPVMIHRAILGSLERFIGILIENHAGAMPLWLAPVHATVLNI------SDSQAE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + + K G D E+I + + P ++VG K + + V ++ R Sbjct: 553 YAQSVVQTMKKAGFRAEVDLRNEKITYKIRDHSVNKVPYLIVVGDKEKNANTVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 M++EE++ + + + Sbjct: 613 VDLGVMTVEELMARMENEIQSKQ 635 >gi|291563461|emb|CBL42277.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [butyrate-producing bacterium SS3/4] Length = 646 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 88/446 (19%), Positives = 150/446 (33%), Gaps = 41/446 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L M+ G +LP G + + RE + G Sbjct: 231 YVTMMEEAKKRDHRKLGKELGLF--MMSDAGPGFPFFLPKGMVLKNTLLDYWREIHKKAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+S P + + LW SG +D Y M + + P + ++ S +SY Sbjct: 289 YVEISTPIILNRSLWETSGHWDHYKNNMYT-TIIDGEDYAIKPMNCPGGVLVYASEPRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ + R E + G+MR R F DA+ F + K + Sbjct: 348 RDLPLRMGELGIVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPEQIRDE--IKNVAGLINQ 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + L + + P S E + S DD+ Sbjct: 406 VYSLFGFKYHVELSTRPEDSMGSDE-----------------DWELATSSLQGALDDLGL 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D H L D++ + ++ F ++ + G Sbjct: 449 DYVINEGDGAFYGPKIDFH---LVDAIGRTWQCGTIQLD----FQLPQRF----ELEYIG 497 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 ADG+ H M + I + +P +AP ++ ++ I + + Sbjct: 498 ADGEKHRPIMIHRVC--FGSIERFIGILIEHFAGAFPTWLAPVQVKVLPI---SEKYEEY 552 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + A L D E+IG + A P ++VG K +D V ++ R G Sbjct: 553 AKSVKAALDAADIRAEIDLRSEKIGYKIREAQGQKIPYMLVVGQKEQADGTVSVRSRFKG 612 Query: 425 IREDMSLEEVINYASHRFSNN--RPV 448 L I + RPV Sbjct: 613 DEGAEDLNVFIANIKAEIAGRVNRPV 638 >gi|237755902|ref|ZP_04584494.1| threonyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691927|gb|EEP60943.1| threonyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5] Length = 643 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 151/442 (34%), Gaps = 39/442 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD L L + + G+ WLP G + ++E + G Sbjct: 235 YLNMLEEAKKRDHRKIGKDLELFL-IDEEIGGGLAIWLPKGAIIRKEIEDAWKKEHLKRG 293 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + LW SG Y + M ++ P + +I++S +SY Sbjct: 294 YQLVYTPHVGKEQLWQTSGHLSLYQENMYPRMQIEEEGYYVKPMNCPFHVEIYKSKQRSY 353 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 + LP ++ +R E G+MR R F DA+ + Sbjct: 354 KELPIRLAELGTVYRYERSGALHGLMRVRGFTQDDAHIICREDQVEDEIREV-------- 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + EF V T + + S + Sbjct: 406 ----------LNLALNTLKSYGFDEFEVYLSTKPEKYVGDDKMWEIAENSLRKAIESTGL 455 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y DV K+ D++ + S + F ++ + + G Sbjct: 456 DYKIDEGGGAFYGPKIDV---KIKDAIGRLWQCSTIQFD----FNLPERFDMY----YIG 504 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + H + G++ V+ + G +W ++P ++ +I I + Sbjct: 505 EDNQKHRPYMIHRAIFGSIERFIGVLLEHYAGFLPVW---LSPVQVKIIPIADKH---LE 558 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E + +L + V DD E++ + A+L P ++VG K V ++ + Sbjct: 559 YAETVKQKLLENDIRVELDDRNERMNKKIRDAELQKIPFMLVVGDKEAETGTVAVREKGK 618 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + +S++E ++ SN Sbjct: 619 QGSQTLSIDEFVSKIKEIISNK 640 >gi|121997230|ref|YP_001002017.1| threonyl-tRNA synthetase [Halorhodospira halophila SL1] gi|166223346|sp|A1WU53|SYT_HALHL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|121588635|gb|ABM61215.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Halorhodospira halophila SL1] Length = 640 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 147/444 (33%), Gaps = 39/444 (8%) Query: 2 RRSKYFLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L + RD L + + S G+ W P G + V IR Sbjct: 226 KQLKAYLDRLAEAERRDHRRLGRTQDLF--HVQEESPGMVFWHPRGWRLYLEVQDYIRRL 283 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E+ P L LW SG + + + M + + + P + ++F+ Sbjct: 284 MRDNGYQEIHTPMLVDRSLWERSGHWAMFAENMF-VTESESRDYAVKPMNCPCHVEVFKQ 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F+ DA+ F T + Sbjct: 343 GLKSYRDLPLRLAEFGSCHRNEPSGTLHGLMRVRGFVQDDAHIFC-TENQIQEEVRTFID 401 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 R + G + + + + P + D + T Sbjct: 402 LVYRAYRDFGFEDVLIALSTRP-----------------DERVGDDALWDKAESALATAL 444 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + ++ A Y + L D L ++ ++ G ++ Sbjct: 445 ETHGLDYTLQPGEGAFYGPKIEF---SLRDCLERVWQLGTIQVDFSMPGRLGAQF----- 496 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + V + +G++ ++ + G W V +++ Sbjct: 497 --VDDDGERRTPVMLHRAILGSLERFIGILIEHYGGALPTWLAPVQAVVLNIT------D 548 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D + +L + G D E+IG + L P +++G + + V ++ Sbjct: 549 RQADYARSVEQQLLESGFRAEADLRNEKIGYKIREHTLQKVPYMLVLGDRELESGTVAVR 608 Query: 420 HRLTGIREDMSLEEVINYASHRFS 443 HR M LEE++ S+ + Sbjct: 609 HRDGTDLGSMELEELVARLSNDIA 632 >gi|310640050|ref|YP_003944808.1| ser-tRNA(thr) hydrolase / threonyl-tRNA synthetase [Paenibacillus polymyxa SC2] gi|309245000|gb|ADO54567.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Paenibacillus polymyxa SC2] Length = 637 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 83/442 (18%), Positives = 152/442 (34%), Gaps = 42/442 (9%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L M + + G+ +LP G + R+ Q G Sbjct: 235 LHLLEEAKKRDHRKLGKELELF--MFSEEAPGMPFYLPKGMVVRTALEDYSRDIQRLHGY 292 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + + LW +SG Y+ Y + M ++ ++ P + +F++ + SYR Sbjct: 293 EEVRTPLMMNNRLWEQSGHYEHYKENM-YFSEVDETTFALKPMNCPGHMLVFKNELHSYR 351 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R EL G+MR R F DA+ F TP + + ++ Sbjct: 352 DLPIRISEFGQVHRHELSGALNGMMRVRTFCQDDAHIFV-TPGQIEKEITDVIKLINEMY 410 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +F V T D + D + Sbjct: 411 SVFG------------------FDFTVELSTRPDDFMGEPALWDQAEQALQNVLDHLGIN 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I A Y D H + D+L + + ++ F K+ T+ G Sbjct: 453 YRINAGDGAFYGPKIDFH---ILDALKRSWQCGTIQLD----FQMPEKFD----LTYVGE 501 Query: 306 DGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D + H + G++ ++ G +W V + + + + Sbjct: 502 DNQKHRPVVIHRAIYGSIDRFMGILTEHFTGAFPLWLAPVHAKLLPV------SENYIET 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ L K G V D E++G + A L P ++G + V ++ R G Sbjct: 556 ANEVQEALLKAGLRVEVDTRNEKLGYKIREAQLEKVPYMFVIGENEKTTGTVAVRKRGEG 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 S+ +++ S + Sbjct: 616 DLGSFSIADIVEKISTEIHEKQ 637 >gi|30248961|ref|NP_841031.1| thrS; threonyl-tRNA synthetase (threonine--tRNA ligase) protein [Nitrosomonas europaea ATCC 19718] gi|73919810|sp|Q82VV1|SYT_NITEU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|30138578|emb|CAD84869.1| thrS; threonyl-tRNA synthetase (threonine--tRNA ligase) protein [Nitrosomonas europaea ATCC 19718] Length = 635 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 147/442 (33%), Gaps = 41/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E RD +L L + + G+ W P G + +R+ G Sbjct: 231 YLRCLEEAEKRDHRKLGKQLDLF--HTQEEAPGMVYWHPKGWVVWQQIEQYMRQTLAGNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG ++++ + M + + ++ P + +F ++SY Sbjct: 289 YVEIRTPQVLDRSLWESSGHWENFRENMF-ITESENRHYAIKPMNCPGHVQVFNHGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + K ++ Sbjct: 348 RDLPLRLAEFGSCHRNEASGALHGLMRVRSFTQDDAHIFCTEDQILGE-VTKFIDLLNQV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++ + P+ + + A+T K+ P E Sbjct: 407 YINFGFSETLIKLSTRPLKRVGTEDQWDKAETALATALNQKELNWEVQPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L DSL + ++ G A + Sbjct: 458 --------GAFYGPKIEF---TLKDSLGRKWQCGTLQLDFSMPARLG--------AGYIA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G +W +++ + + Sbjct: 499 EDNTRKIPVMLHRAILGSMERFIGILIEHHAGALPLWLSPEQVIILNI------SRNQAE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + I L + G D E+I + + P ++VG K + + V ++ R Sbjct: 553 YAQLITDELKQSGIRASSDLRNEKISYKIREHSMQKIPYLMVVGDKEMENRTVTVRGRAG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS+E + A + Sbjct: 613 QDYGAMSVESFVVRAQEEIAKR 634 >gi|237745470|ref|ZP_04575950.1| threonyl-tRNA synthetase [Oxalobacter formigenes HOxBLS] gi|229376821|gb|EEO26912.1| threonyl-tRNA synthetase [Oxalobacter formigenes HOxBLS] Length = 650 Score = 260 bits (665), Expect = 3e-67, Method: Composition-based stats. Identities = 75/443 (16%), Positives = 143/443 (32%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD L L + G+ W P G V +R+ G Sbjct: 246 YLHMLEEAEKRDHRRLGRSLDLF--HFQDEAPGLIFWHPKGWTIWQQVEQYMRKVYRDNG 303 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D+Y + M + ++ P + I+RS++ SY Sbjct: 304 YQEVKGPQILDRSLWEKSGHWDNYKENMFT-TESENRVYAIKPMNCPGHVQIYRSNLHSY 362 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + + R+E G+MR R F D + F + ++ Sbjct: 363 RELPLRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQILDECVAFT-DLLKKV 421 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I + + P S E D + Sbjct: 422 YKDFGFTDIIYKVATRPEKRVGSDE-----------------AWDKAENALIESLKRSGC 464 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D++ + ++ G A + Sbjct: 465 EFELSPGDGAFYGPKIEY---TLRDAIGRMWQCGTIQVDFSMPMRLG--------AEYVA 513 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G++ ++ +H G +W V +++ + Sbjct: 514 EDNTRKIPVMIHRAILGSLERFIGILIENHAGAMPLWLAPVQAVVLNI------SDAQAE 567 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + + K G V D E+I + + P ++VG K + + V ++ R Sbjct: 568 YAKSVVETMKKAGLRVEADLRNEKITYKIRDHSVNKVPYLLVVGDKEKNGNTVAVRARGG 627 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 MS +E+I + + Sbjct: 628 VDLGAMSADELIARMENEIRAKQ 650 >gi|313637683|gb|EFS03062.1| threonyl-tRNA synthetase [Listeria seeligeri FSL S4-171] Length = 483 Score = 260 bits (665), Expect = 3e-67, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 168/441 (38%), Gaps = 32/441 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 F+ + +E RD +L L T I + +G+ WLP G + I +++ R G Sbjct: 73 FIQMQKEAKERDHRKLGKELELFTNSI-EVGQGLPLWLPKGATIRRVIERYIVDKEERLG 131 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I SY Sbjct: 132 YNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHSY 191 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 R LP ++ + R E+ ++ + + + P+ K + ++ L ++ Sbjct: 192 RELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVY 251 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDIIS 244 +K R D T+ + D D + D++ Sbjct: 252 KDFDIKDYSFRLS--------------YRDPKNTEKYFDDDAMWDKAQAMLKSAMDEMGM 297 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y DV ++ ++ + + +S ++ F ++ T+ G Sbjct: 298 DYFEADGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LTYIG 346 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H + G + + + + +P +AP ++ LI + A D Sbjct: 347 EDGEKHRPVVIHR--GVVSTMERFVAYLIEEYKGAFPTWLAPVQMELIPVNA--DAHLDY 402 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + +L + G V DD E++G + A P +++G + + V ++ + Sbjct: 403 AKGVQDKLQRAGLRVEVDDRNEKLGYKIREAQTKKIPYALVLGDQEMESGTVNVRRYGSK 462 Query: 425 IREDMSLEEVINYASHRFSNN 445 E M L+ I+ S Sbjct: 463 DSETMELDTFISQVVQEVSKY 483 >gi|150021207|ref|YP_001306561.1| threonyl-tRNA synthetase [Thermosipho melanesiensis BI429] gi|149793728|gb|ABR31176.1| threonyl-tRNA synthetase [Thermosipho melanesiensis BI429] Length = 636 Score = 260 bits (665), Expect = 3e-67, Method: Composition-based stats. Identities = 87/444 (19%), Positives = 169/444 (38%), Gaps = 43/444 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +L +L+E RD KL L I+ + G+ +LP G L+ + A R Sbjct: 232 YLKMLEEAKKRDHRKLGPKLGLF--FINTDVAAGMPIFLPKGTIILNELMAFSRSLHEEY 289 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + + LW +SG +D Y + M ++ + P + I+++++ S Sbjct: 290 GYTEVMTPLVMNVKLWYQSGHWDHYKENM-YFTEKEEVEYAIKPMNCPGHILIYKNNVVS 348 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ R E G++R R F DA+ F + + +K+ + Sbjct: 349 YRDLPIRLFEFGKVHRYERSGVLHGLLRVRAFTQDDAHIFCRQDQIEEE-VSKVVKLIDQ 407 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G + P E + + +DI Sbjct: 408 LYKPFGFSYRAT-LSTMPEDHMGDEE-----------------TWEKATNALRKVLEDIK 449 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + DSL + + ++ F ++ T+ Sbjct: 450 LEFEVAEGEGAFYGPKVDFH---VRDSLGREWQCATIQLD----FQMPERF----ELTYV 498 Query: 304 GADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG + V + + G++ ++ + +P ++P ++ ++ + Sbjct: 499 DKDGIEKRPVMIHTAKYGSLERFFGILI---EHFAGAFPLWLSPIQVVVLPVSDK---YV 552 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 KIY+ L + G V DD E +G + A + P +IVG + K+ I+ R Sbjct: 553 SYARKIYSILMENGVRVSVDDRNETLGYKIREAQINKIPYMIIVGEREEESGKISIRSRD 612 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 ++D+++EE ++ S R Sbjct: 613 GVEQKDIAVEEFLDLLSVSIKERR 636 >gi|312113796|ref|YP_004011392.1| threonyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100] gi|311218925|gb|ADP70293.1| threonyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100] Length = 640 Score = 260 bits (665), Expect = 3e-67, Method: Composition-based stats. Identities = 79/440 (17%), Positives = 158/440 (35%), Gaps = 40/440 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD ++ L + + + G W P G + A +R Q+ Sbjct: 230 KSYLTMLEEAEKRDHRRLGREMDLF--HLQEEAPGSVFWHPKGWTVFQALIAFMRRRQHA 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 +G +E++ P + LW +SG ++ +G+ M +++ P + IF++ +K Sbjct: 288 SGHVEVNSPDMMERKLWEQSGHWEKFGENMFVTETPDERVFCCKPMNCPGHIQIFKNGLK 347 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R E G+MR R F DA+ F + ++ + L Sbjct: 348 SYRDLPLRIAEFGKVHRYEPSGALHGIMRVRHFTQDDAHIFCTPEQITEECVHLN-SLLL 406 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 I+ G + + ++ + P S E D + + Sbjct: 407 SIYRDFGFEDVVIKLSTRPEKRVGSDE-----------------VWDKAEAALKAAVEAA 449 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 ++ A Y + L D++ + ++ G A + Sbjct: 450 GEPYTLNPGEGAFYGPKLEY---TLRDAIGREWQCGTIQLDFNLPVRLG--------AFY 498 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DG H + G++ ++ ++ G +W V +++ Sbjct: 499 IGEDGAKHTPVMIHRALFGSLERFIGILIENYAGHLPLWLSPVQTMVATIV------SDA 552 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 ++ A L G D E+I + L P+ +VG + + V ++ Sbjct: 553 DAYAGEVEAALVAAGVRAETDLRNEKINYKVREHSLAKVPVMFVVGKREAEERTVSVRRL 612 Query: 422 LTGIREDMSLEEVINYASHR 441 + +E +SL+E I + Sbjct: 613 GSQAQETLSLDEAIARIATE 632 >gi|70729481|ref|YP_259219.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf-5] gi|68343780|gb|AAY91386.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf-5] Length = 640 Score = 260 bits (665), Expect = 3e-67, Method: Composition-based stats. Identities = 81/442 (18%), Positives = 147/442 (33%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRKIGKRLGLF--HTQEEAPGMVFWHPNGWTLYQVLEQYMRKVQRDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG + +Y + M + + P + +F +KSY Sbjct: 289 YLEIKTPQVVDRSLWEKSGHWANYAENMFT-TESESRDYAIKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+E G+MR R F DA+ F + S + + Sbjct: 348 RELPMRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAES-AAFIKLTMDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K I M+ + P S D D + D Sbjct: 407 YADFGFKDIEMKLSTRPEKR-----------------VGSDDLWDRAESALAAALDSAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ G A + Sbjct: 450 PYDLQPGEGAFYGPKIEF---SLKDCLGRVWQCGTLQLDFNLPIRLG--------AEYVS 498 Query: 305 ADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + H V + +G+ ++ ++ +P +AP + ++NI D Sbjct: 499 EDNSRKHPVMLHRAILGSFERFVGILIEHYE---GAFPAWLAPTQAVVMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L++ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FALEVEKTLNQSGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + + + S Sbjct: 613 EDLGSMPVAQFSAFLAQAVSRR 634 >gi|164687668|ref|ZP_02211696.1| hypothetical protein CLOBAR_01310 [Clostridium bartlettii DSM 16795] gi|164603442|gb|EDQ96907.1| hypothetical protein CLOBAR_01310 [Clostridium bartlettii DSM 16795] Length = 639 Score = 260 bits (665), Expect = 3e-67, Method: Composition-based stats. Identities = 84/448 (18%), Positives = 162/448 (36%), Gaps = 42/448 (9%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +++E RD +L L I + G ++P G + + + RE Sbjct: 229 EAYLHLMEEAKKRDHRKLGKELDLF--FIPEEGPGFPLFMPKGMQLKNALLEFWREVHKE 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 +E+ P + + LW SG + Y + M + +D+ P + ++S Sbjct: 287 DNYVEIETPIILNRHLWETSGHWYHYKENMYTVK-IDDQDFAIKPMNCPGGMLYYKSKPH 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+ P ++ R EL G+MR R F DA+ F L + K V + Sbjct: 346 SYRDFPMRVAELGRVHRHELSGALHGLMRVRAFTQDDAHIFMLPEQIKDE--IKDVVRLI 403 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +++ + + P + E + +++ Sbjct: 404 DSVYKVFGFQYGIELSTRPEDSMGTDE-----------------EWEIAENGLREALEEL 446 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I E A Y D H L D L + +++ ++ AT+ Sbjct: 447 GLAYEINEGDGAFYGPKIDFH---LRDCLGRTWQCGTIQLDM----QLPQRFD----ATY 495 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DG+ H + +G++ ++ + +P +AP ++ ++ I Sbjct: 496 IGQDGEKHRPVMIHRVLLGSIERFIGILI---EHYAGKFPVWIAPTQVKILPISDK---Y 549 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D + + L G V DD E++G + A L P ++VG K V + V ++ R Sbjct: 550 NDYAKAVKDALFAKGLRVEIDDRAEKMGFKIREAQLEKVPYMLVVGEKEVEANAVSVRSR 609 Query: 422 LTGIREDMSLEEVINYASHRFSNNRPVL 449 G +S++E + + V+ Sbjct: 610 DKGEMGSLSVDEFVAMVCKEVEDKVNVI 637 >gi|146311380|ref|YP_001176454.1| threonyl-tRNA synthetase [Enterobacter sp. 638] gi|166987323|sp|A4W9M3|SYT_ENT38 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|145318256|gb|ABP60403.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Enterobacter sp. 638] Length = 642 Score = 260 bits (665), Expect = 3e-67, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLVRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F T + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFC-TEGQVRDEVNACIRMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------TWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F + S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPQRLS----ASYVG 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + + +G++ ++ G W V +++ D Sbjct: 500 EDNERQIPVMIHRAILGSIERFIGILTEEFAGFFPTWLAPVQVVVMNIT------DSQAD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVKELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + EVI + Sbjct: 614 KDLGSLDVNEVIEKLRLEIRSR 635 >gi|292670652|ref|ZP_06604078.1| threonine-tRNA ligase [Selenomonas noxia ATCC 43541] gi|292647679|gb|EFF65651.1| threonine-tRNA ligase [Selenomonas noxia ATCC 43541] Length = 639 Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats. Identities = 84/440 (19%), Positives = 157/440 (35%), Gaps = 42/440 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + +H+ G + P G + + RE R G Sbjct: 233 YLHMLEEAAKRDHRKLGRELDLFS--LHEEGPGFPFFHPNGMILRNALLEYWREVHRRYG 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+S P + S LW SG + Y + M + + + P + ++RS + SY Sbjct: 291 YQEISTPVILSRKLWETSGHWFHYRENMYT-TEIDGEDYAIKPMNCPGCMLVYRSQLHSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R EL G+ R R F DA+ +TP+ + + + Sbjct: 350 RDLPLRLAELGLVHRHELSGALHGLFRVRNFTQDDAH-LFVTPDQIEGEIQHTINLFDEV 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + GL + P S E D ++ Sbjct: 409 YRTFGLSY-KAELSTRPEDSMGSDE-----------------MWDLATEGLRNALENRGL 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H L DS+ + +++ F T+ G Sbjct: 451 DYIVNEGDGAFYGPKIDFH---LRDSIGRTWQCGTIQLDMSLPEKFD--------LTYIG 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ ++ + +P +AP ++ ++ I + Sbjct: 500 EDGEKHRPVMLHRVVYGSIERFIGILI---ENYAGAFPVWMAPVQVRILPIT---ERHTA 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E + R+ +G V DD E+ G + + + P ++VG + V ++ Sbjct: 554 YAESLRGRMFDLGIRVEVDDRNEKTGYKIRESQVKKTPYTLVVGDQEQETGAVALRKYGE 613 Query: 424 GIREDMSLEEVINYASHRFS 443 M+ ++ I + + Sbjct: 614 KDSVVMAADDFIALVQEKIA 633 >gi|313633110|gb|EFS00008.1| threonyl-tRNA synthetase [Listeria seeligeri FSL N1-067] Length = 485 Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 168/441 (38%), Gaps = 32/441 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 F+ + +E RD +L L T I + +G+ WLP G + I +++ R G Sbjct: 75 FIQMQKEAKERDHRKLGKELELFTNSI-EVGQGLPLWLPKGATIRRVIERYIVDKEERLG 133 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I SY Sbjct: 134 YNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHSY 193 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 R LP ++ + R E+ ++ + + + P+ K + ++ L ++ Sbjct: 194 RELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVY 253 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDIIS 244 +K R D T+ + D D + D++ Sbjct: 254 KDFDIKDYSFRLS--------------YRDPKNTEKYFDDDAMWDKAQAMLKSAMDEMGM 299 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y DV ++ ++ + + +S ++ F ++ T+ G Sbjct: 300 DYFEADGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LTYIG 348 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H + G + + + + +P +AP ++ LI + A D Sbjct: 349 EDGEKHRPVVIHR--GVVSTMERFVAYLIEEYKGAFPTWLAPVQMELIPVNA--DAHLDY 404 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + +L + G V DD E++G + A P +++G + + V ++ + Sbjct: 405 AKGVQDKLQRAGLRVEVDDRNEKLGYKIREAQTKKIPYALVLGDQEMESGTVNVRRYGSK 464 Query: 425 IREDMSLEEVINYASHRFSNN 445 E M L+ I+ S Sbjct: 465 DSETMELDTFISQVVQEVSKY 485 >gi|152970729|ref|YP_001335838.1| threonyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|330009686|ref|ZP_08306560.1| threonine--tRNA ligase [Klebsiella sp. MS 92-3] gi|150955578|gb|ABR77608.1| threonyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|328534774|gb|EGF61330.1| threonine--tRNA ligase [Klebsiella sp. MS 92-3] Length = 622 Score = 260 bits (664), Expect = 4e-67, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 141/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 212 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQ 269 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 270 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 328 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 329 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQVRDE-VNACIRMVYDM 387 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 388 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------TWDRAEADLAVALEENNI 430 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F + S A++ G Sbjct: 431 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPQRLS----ASYVG 479 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + V + +G++ ++ G W V +++ + Sbjct: 480 ENNERQVPVMIHRAILGSLERFIGILTEEFAGFFPTWIAPVQVVVMNIT------DSQAE 533 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 534 YVNELTRKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 593 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 594 KDLGSMDVNEVIEKLQQEIRSR 615 >gi|148548433|ref|YP_001268535.1| threonyl-tRNA synthetase [Pseudomonas putida F1] gi|166225483|sp|A5W5E1|SYT_PSEP1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|148512491|gb|ABQ79351.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Pseudomonas putida F1] Length = 640 Score = 260 bits (664), Expect = 4e-67, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 145/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + + G+ W G + +R Q G Sbjct: 231 YIQRIEEAEKRDHRKIGKQLDLF--HLQEEAPGMVFWHANGWTVYQVLEQYMRGVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW SG + +Y + M + P + +F +KSY Sbjct: 289 YQEIKTPQVVDRILWERSGHWSNYAENMFT-TSSESRDYAVKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + K + L + Sbjct: 348 RDLPLRLAEFGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEEQVKKEA-ADFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I M+ + P S E A+T + ++ Sbjct: 407 YKDFGFSDIAMKLSTRPAKRVGSEELWDRAET-----------------ALADALNESGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L N + + + A++ Sbjct: 450 EWEYQPGEGAFYGPKIEF---TLRDCLGRNWQCGTLQYDPNLP--------ERLDASYIA 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D V + +G+ ++ + ++P +AP + ++NI D Sbjct: 499 EDNSRVRPVMLHRAILGSFERFIGMLI---EHYAGVFPAWLAPTQAVIMNITDK---QTD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L+ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FALEVEKSLNGSGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVETQTVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + + + S Sbjct: 613 ADLGSMPVAQFVELLTQAVSRR 634 >gi|225849423|ref|YP_002729587.1| threonyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1] gi|225644143|gb|ACN99193.1| threonyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1] Length = 641 Score = 260 bits (664), Expect = 4e-67, Method: Composition-based stats. Identities = 81/444 (18%), Positives = 154/444 (34%), Gaps = 41/444 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +L +L+E RD +L L MI + G+ WLP G + +EE + Sbjct: 235 YLNMLEEAKKRDHRKIGKELELF--MIDEEVGGGLAIWLPKGAIIRKEIEDAWKEEHLKR 292 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + LW SG Y + M ++ P + +I++S +S Sbjct: 293 GYQLVYTPHVGKEHLWQTSGHLSFYQENMYPRMQIEEEGYYVKPMNCPFHVEIYKSKQRS 352 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 Y+ LP ++ +R E G+MR R F DA+ + + L Sbjct: 353 YKELPIRLAELGTVYRYERSGALHGLMRVRGFTQDDAHIICREDQVEDE-IRDVLNFALD 411 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 G + + P + S + Sbjct: 412 TLKSYGFDEFEIYLSTRPEKS-----------------VGDDRMWEVATQSLRKAIESTG 454 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E A Y DV K+ D++ + S + F ++ + + Sbjct: 455 IDYKIDEGGGAFYGPKIDV---KIKDAIGRMWQCSTIQFD----FNLPQRFDMY----YI 503 Query: 304 GADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G D + H + G++ V+ + G +W ++P ++ +I I Sbjct: 504 GEDNQRHRPYMIHRAIFGSIERFIGVLLEHYAGFLPVW---LSPVQVKIIPIADKH---L 557 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D K+ L + V DD E++ + A+L P +++G K V ++ V ++ + Sbjct: 558 DFANKVKDILLQNKVRVEVDDRSERMNKKIRDAELQKIPFMLVIGDKEVENNSVAVREKA 617 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 +G E M+++ + + + Sbjct: 618 SGKTESMTVDNFVKKITSLIKEKK 641 >gi|224499783|ref|ZP_03668132.1| threonyl-tRNA synthetase [Listeria monocytogenes Finland 1988] Length = 640 Score = 260 bits (664), Expect = 4e-67, Method: Composition-based stats. Identities = 77/441 (17%), Positives = 166/441 (37%), Gaps = 32/441 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 F+ + +E RD +L L T I + +G+ WLP G + I +++ R G Sbjct: 230 FIQMQKEAKERDHRKLGKELELFTNSI-EVGQGLPLWLPKGATIRRVIERYIVDKEERLG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I SY Sbjct: 289 YNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 R LP ++ + R E+ ++ + + + P+ K + ++ L ++ Sbjct: 349 RELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIIS 244 + R D T+ + D M + + D++ Sbjct: 409 KDFDITDYSFRLS--------------YRDPKNTEKYFDDDAMWEKAQAMLKSAMDEMEM 454 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ ++ + + +S ++ F ++ T+ G Sbjct: 455 DYFEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LTYIG 503 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H + G + + + + +P +AP ++ +I + A D Sbjct: 504 EDGEKHRPVVIHR--GVVSTMERFVAYLIEEYKGAFPTWLAPVQMEIIPVNA--DAHLDY 559 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + +L + G DD E++G + A P +++G + V V ++ + Sbjct: 560 AKGVQDKLQRAGLRAEVDDRNEKLGYKIREAQTKKIPYALVLGDQEVEAGSVNVRRYGSK 619 Query: 425 IREDMSLEEVINYASHRFSNN 445 E M L+ I S Sbjct: 620 DSETMDLDAFIAQVVAEVSKY 640 >gi|113867357|ref|YP_725846.1| threonyl-tRNA synthetase [Ralstonia eutropha H16] gi|123134164|sp|Q0KBZ3|SYT_RALEH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|113526133|emb|CAJ92478.1| Threonyl-tRNA synthetase [Ralstonia eutropha H16] Length = 635 Score = 260 bits (664), Expect = 4e-67, Method: Composition-based stats. Identities = 75/444 (16%), Positives = 147/444 (33%), Gaps = 41/444 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD L L + + + G+ W P G + V +R Sbjct: 229 EAYLHMLEEAEKRDHRKLGKTLDLF--HLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLTD 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW +SG + +Y + M + + + P + IF ++ Sbjct: 287 AGYDEVRTPQVMDRSLWEKSGHWQNYKENMF-VTESEKRDYAIKPMNCPGHVQIFNHGLR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F+ DA+ F + + Sbjct: 346 SYRDLPLRLAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEEQIVAEA-KAFNELAF 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G K + ++ P S E A+ G + +P E Sbjct: 405 SVYDDFGFKDVKVKLSLRPDQRAGSDEIWDHAEEGLRLALRACGVDWEELPGE------- 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + H + D++ + + +++ + A + Sbjct: 458 ----------GAFYGPKVEYH---IKDAIGRSWQCGTLQLDLVLP--------ERLDAEY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D + +G+ ++ +H G W +++ Sbjct: 497 VSEDNSRKRPVMLHRAILGSFERFLGILLENHAGALPAWLAPEQVVVMNIA------DSQ 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + E + L K G D E+I + L P ++VG K S+V ++ R Sbjct: 551 AEYAESVVQLLQKQGFRAKADLRNEKITYKIREHSLQKVPYLLVVGDKERDASQVAVRAR 610 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 M + + + ++ Sbjct: 611 GNVDLGVMPVSAFVERLKNDVASK 634 >gi|82543879|ref|YP_407826.1| threonyl-tRNA synthetase [Shigella boydii Sb227] gi|187734126|ref|YP_001880509.1| threonyl-tRNA synthetase [Shigella boydii CDC 3083-94] gi|123769450|sp|Q321L0|SYT_SHIBS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238689503|sp|B2U397|SYT_SHIB3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|81245290|gb|ABB65998.1| threonine tRNA synthetase [Shigella boydii Sb227] gi|187431118|gb|ACD10392.1| threonyl-tRNA synthetase [Shigella boydii CDC 3083-94] Length = 642 Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNGCIRLVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ + Sbjct: 500 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT------DSQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +LS G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 614 KDLGSMDVNEVIEKLQQEIRSR 635 >gi|254828206|ref|ZP_05232893.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] gi|258600595|gb|EEW13920.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] Length = 640 Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 166/441 (37%), Gaps = 32/441 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 F+ + +E RD +L L T I + +G+ WLP G + I +++ R G Sbjct: 230 FIQMQKEAKERDHRKLGKELELFTNSI-EVGQGLPLWLPKGATIRRVIERYIVDKEERLG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I SY Sbjct: 289 YNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 R LP ++ + R E+ ++ + + + P+ K + ++ L ++ Sbjct: 349 RELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIIS 244 + R D T+ + D M + + D++ Sbjct: 409 KDFDITDYSFRLS--------------YRDPKNTEKYFDDDAMWEKAQAMLKSAMDEMEM 454 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ ++ + + +S ++ F ++ T+ G Sbjct: 455 DYFEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LTYIG 503 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H + G + + + + +P +AP ++ LI + A D Sbjct: 504 EDGEKHRPVVIHR--GVVSTMERFVAYLIEEYKGAFPTWLAPVQMELIPVNA--DAHLDY 559 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + +L + G DD E++G + A P +++G + V V ++ + Sbjct: 560 AKGVQDKLQRAGLRAEVDDRNEKLGYKIREAQTKKIPYALVLGDQEVEAGSVNVRRYGSK 619 Query: 425 IREDMSLEEVINYASHRFSNN 445 E M L+ I S Sbjct: 620 DSETMDLDAFIAQVVAEVSKY 640 >gi|188996057|ref|YP_001930308.1| threonyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1] gi|229558457|sp|B2V6M2|SYT_SULSY RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|188931124|gb|ACD65754.1| threonyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1] Length = 643 Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 150/442 (33%), Gaps = 39/442 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD L L + + G+ WLP G + ++E + G Sbjct: 235 YLNMLEEAKKRDHRKIGKDLELFL-IDEEIGGGLAIWLPKGAIIRKEIEDAWKKEHLKRG 293 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + LW SG Y + M ++ P + +I++S +SY Sbjct: 294 YQLVYTPHVGKEQLWQTSGHLSFYQENMYPRMQIEEEGYYVKPMNCPFHVEIYKSKQRSY 353 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 + P ++ +R E G+MR R F DA+ + Sbjct: 354 KEFPIRLAELGTVYRYERSGALHGLMRVRGFTQDDAHIICREDQVEDEIREV-------- 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + EF V T + + S + Sbjct: 406 ----------LNLALNTLKSYGFDEFEVYLSTKPEKYVGDDKMWEVAENSLRKAIESTGL 455 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I + A Y DV K+ D++ + S + F ++ + + G Sbjct: 456 DYKIDDGGGAFYGPKIDV---KIKDAIGRLWQCSTIQFD----FNLPERFDMY----YIG 504 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + H + G++ V+ + G +W ++P ++ +I I + Sbjct: 505 EDNQKHRPYMIHRAIFGSIERFIGVLLEHYAGFLPVW---LSPVQVKIIPIADKH---LE 558 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E + +L + V DD E++ + A+L P ++VG K V ++ + Sbjct: 559 YAETVKQKLLENDIRVELDDRNERMNKKIRDAELQKIPFMLVVGDKEAETGTVAVREKGK 618 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + +S++E ++ SN Sbjct: 619 QGSQTLSIDEFVSKIKEIISNK 640 >gi|16803599|ref|NP_465084.1| threonyl-tRNA synthetase [Listeria monocytogenes EGD-e] gi|224501501|ref|ZP_03669808.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL R2-561] gi|22654119|sp|Q8Y6X2|SYT_LISMO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|16410988|emb|CAC99637.1| threonyl-tRNA synthetase [Listeria monocytogenes EGD-e] Length = 640 Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats. Identities = 77/441 (17%), Positives = 166/441 (37%), Gaps = 32/441 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 F+ + +E RD +L L T I + +G+ WLP G + I +++ R G Sbjct: 230 FIQMQKEAKERDHRKLGKELELFTNSI-EVGQGLPLWLPKGATIRRVIERYIVDKEERLG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I SY Sbjct: 289 YNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 R LP ++ + R E+ ++ + + + P+ K + ++ L ++ Sbjct: 349 RELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIIS 244 + R D T+ + D M + + D++ Sbjct: 409 KDFDITDYSFRLS--------------YRDPKNTEKYFDDDAMWEKAQAMLKSAMDEMEM 454 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ ++ + + +S ++ F ++ T+ G Sbjct: 455 DYFEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LTYIG 503 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H + G + + + + +P +AP ++ +I + A D Sbjct: 504 EDGEKHRPVVIHR--GVVSTMERFVAYLIEEYKGAFPTWLAPVQMEIIPVNA--DAHLDY 559 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + +L + G DD E++G + A P +++G + V V ++ + Sbjct: 560 AKGVQDKLQRAGLRAEVDDRNEKLGYKIREAQTKKIPYALVLGDQEVEAGSVNVRRYGSK 619 Query: 425 IREDMSLEEVINYASHRFSNN 445 E M L+ I S Sbjct: 620 DSETMDLDAFIAQVVAEVSKY 640 >gi|294649364|ref|ZP_06726795.1| threonine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194] gi|292824734|gb|EFF83506.1| threonine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194] Length = 640 Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD L L + + + G+ W G + +R+ Q G Sbjct: 231 YIKRIEEAEKRDHRKIGKALDLF--HMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +Y + M + P + +F +KSY Sbjct: 289 YQEIKTPQIVDFTLWEKSGHAANYAENMFT-THSESRNYAVKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + + L + Sbjct: 348 RDLPIRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGQE-VADFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + M+ + P D S DD Sbjct: 407 YKDFGFEEVQMKLSTRPEKR-----------------VGDDALWDIAEKSLADALDDAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + + A++ Sbjct: 450 AWDLQPGEGAFYGPKIEF---SLKDCLGRVWQCGTIQCDFNLPIRLD--------ASYVT 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + + +G+ ++ + P +AP + ++NI D Sbjct: 499 EDNERDQPVMLHRAILGSFERFIGILI---EHYAGFMPPWLAPIQACVMNITDS---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ACE++ A+L + G D E+IG + L P +++G + V + V ++ R Sbjct: 553 ACEQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS++ I+ + Sbjct: 613 KNLGTMSIDAFIDLVKSAVAER 634 >gi|285017864|ref|YP_003375575.1| threonyl-tRNA synthetase (threonine--tRNA ligase) protein [Xanthomonas albilineans GPE PC73] gi|283473082|emb|CBA15587.1| probable threonyl-trna synthetase (threonine--trna ligase) protein [Xanthomonas albilineans] Length = 634 Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats. Identities = 74/438 (16%), Positives = 144/438 (32%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + + RD + L L + + G+ W P G V +R+ G Sbjct: 232 YILRMEEADKRDHRKIAKALDLF--HLQEEGPGLVFWHPKGWSIWQVVEQYMRKVYRDNG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D+Y M + + P + +F + SY Sbjct: 290 YGEVRCPQILDVSLWQQSGHWDNYQDNMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F T + + L++ Sbjct: 349 RDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHIFC-TEQQIEAEVTAFHRQALKV 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P D + Sbjct: 408 YTDFGFDDIQIKIALRPEKR-----------------LGEDATWDKAEAALRAALGACGV 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + H L D++ ++ ++ G A + Sbjct: 451 EWQELPGEGAFYGPKIEYH---LKDAIGRTWQLGTMQVDFMMPGRLG--------AEYVD 499 Query: 305 AD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 K H V + +G+M ++ + ++P +AP + ++NI D Sbjct: 500 EHSQKRHPVMLHRAIVGSMERFIGILI---EHHAGVFPAWLAPVQAMVMNIT---DAQAD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L+ G + D E+IG + L P ++VG + + + ++ R Sbjct: 554 YVDSVRKLLANQGFRIEADLRNEKIGYKIREHTLQRVPYLLVVGDREKENGAIAVRTRSG 613 Query: 424 GIREDMSLEEVINYASHR 441 MS+ + Sbjct: 614 EDLGTMSVADFAERLRAE 631 >gi|319778289|ref|YP_004129202.1| Threonyl-tRNA synthetase [Taylorella equigenitalis MCE9] gi|317108313|gb|ADU91059.1| Threonyl-tRNA synthetase [Taylorella equigenitalis MCE9] Length = 646 Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats. Identities = 72/443 (16%), Positives = 145/443 (32%), Gaps = 41/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 KY + + RD +L L + G+ W P G V +R+ Sbjct: 235 KYLTMLEEAEKRDHRKLGKELDLF--HFQDEAPGLIFWHPKGWTIWQQVEQFMRKVYVEN 292 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + LW ++G +D+Y + M ++ P + I+ S + S Sbjct: 293 GYQEIKAPQILDLGLWKKTGHWDNYKENMFT-TQSENREYGLKPMNCPGHVQIYNSTLHS 351 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + + R+E G+MR R F D + F + + Sbjct: 352 YRELPIRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQLLAECLAFT-ALLQK 410 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G + + + P + E A+ + P E Sbjct: 411 VYKEFGFTEVLYKIATRPEKRIGADEIWDKAEKALMESLKQSGCEFEISPGE-------- 462 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 A Y + L D++ + + ++ G A + Sbjct: 463 ---------GAFYGPKIEY---TLKDAIGRHWQCGTIQVDFSMPARLG--------AEYV 502 Query: 304 G-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 D + V + +G++ ++ + P ++P + + I + Sbjct: 503 DADDTRKTPVMLHRAILGSLERFIGMLI---ENYSGAMPPWLSPEHVVVCPI---SEAFN 556 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D ++ +L++ V D E+I + + P ++VG K S S V ++ R Sbjct: 557 DYALEVQTKLNQK-FRVKVDLRNEKITKKIRENSMQKIPYILVVGEKERSSSSVAVRARG 615 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 +++++ I + N Sbjct: 616 NIDLGVLTVDDFIARLQNEIDNK 638 >gi|77164649|ref|YP_343174.1| threonyl-tRNA synthetase, class IIA [Nitrosococcus oceani ATCC 19707] gi|123757888|sp|Q3JC02|SYT_NITOC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|76882963|gb|ABA57644.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707] Length = 644 Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats. Identities = 74/441 (16%), Positives = 161/441 (36%), Gaps = 39/441 (8%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKG-IYSWLPLGQKALDNVNAIIRE 59 + K +L L+E RD L L + I + + G + W P+G + + +E Sbjct: 226 KALKAYLHRLEEAEKRDHRRIGADLDLFS--IQEEAGGGLVFWHPMGARIRRVIEDFWQE 283 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 G + P + +LW SG D Y + M + + + + P + I++ Sbjct: 284 RHTAAGYEMLYTPHIAHEELWQTSGHTDFYRESMYQPMEDDHQLYQLKPMNCPFHVLIYQ 343 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 ++SYR LP + ++ +R E+ G+MR R F DA+ F + + Sbjct: 344 GRLRSYRELPIRWAELGTVYRHEMSGALHGLMRVRGFTQDDAHIFCREEQIENE-ILGIL 402 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L + G + + P + + + + Sbjct: 403 DLTLEMLAAFGFDRYEIDLSTRPEKS-----------------VGPEAIWEQATQALRSA 445 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 D ++ E A Y D+ K+ D++ + S ++ F ++++ Sbjct: 446 LDKKGLDYAVDEGGGAFYGPKIDI---KIEDAIGRKWQCSTVQLD----FNLPERFAMEY 498 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + + + +G++ V+ ++ +P +AP ++ +++I Sbjct: 499 VAE---DGARHRPIMIHRAVLGSLERFFGVLIEHYE---GKFPPWLAPVQVVVMSITDRQ 552 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + ++ + G D E+IG + L P +++G + V++ V + Sbjct: 553 EG---YARQVEEAMRNKGFRSLLDLRNEKIGFKIREHILRRIPYLLVIGDREVANQTVAV 609 Query: 419 KHRLTGIREDMSLEEVINYAS 439 + R + MSL+ + + S Sbjct: 610 RTRYSQDLGAMSLDAFMEHLS 630 >gi|26989188|ref|NP_744613.1| threonyl-tRNA synthetase [Pseudomonas putida KT2440] gi|38258320|sp|Q88K27|SYT_PSEPK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|24984027|gb|AAN68077.1|AE016439_12 threonyl-tRNA synthetase [Pseudomonas putida KT2440] gi|313499446|gb|ADR60812.1| ThrS [Pseudomonas putida BIRD-1] Length = 640 Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 145/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + + G+ W G + +R Q G Sbjct: 231 YIQRIEEAEKRDHRKIGKQLDLF--HLQEEAPGMVFWHANGWTVYQVLEQYMRGVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW SG + +Y + M + P + +F +KSY Sbjct: 289 YQEIKTPQVVDRILWERSGHWSNYAENMFT-TSSESRDYAVKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + K + L + Sbjct: 348 RDLPLRLAEFGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEDQVKKEA-ADFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I M+ + P S E A+T + ++ Sbjct: 407 YKDFGFSDIAMKLSTRPAKRVGSEELWDRAET-----------------ALADALNESGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L N + + + A++ Sbjct: 450 EWEYQPGEGAFYGPKIEF---TLRDCLGRNWQCGTLQYDPNLP--------ERLDASYIA 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D V + +G+ ++ + ++P +AP + ++NI D Sbjct: 499 EDNSRVRPVMLHRAILGSFERFIGMLI---EHYAGVFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L+ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FALEVEKSLNGSGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVETQTVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + + + S Sbjct: 613 ADLGSMPVAQFVELLTQAVSRR 634 >gi|288959315|ref|YP_003449656.1| threonyl-tRNA synthetase [Azospirillum sp. B510] gi|288911623|dbj|BAI73112.1| threonyl-tRNA synthetase [Azospirillum sp. B510] Length = 650 Score = 260 bits (663), Expect = 5e-67, Method: Composition-based stats. Identities = 82/438 (18%), Positives = 151/438 (34%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + + G W P G + IR + Sbjct: 235 YLHQIEEAEKRDHRKLGKELDLF--HVQEEAVGSVFWHPKGWTLYRTLETYIRTKLKAAD 292 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKS 124 +E+ P L + L+ SG +D YG M ++ D +K + P + IFR+ ++S Sbjct: 293 YVEVKTPQLIDSSLFKASGHWDMYGDNMFKVEADGGEKLLGIKPMNCPGHVQIFRNGLRS 352 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + R+E G+MR R F DA+ F + + + L Sbjct: 353 YRDLPIRMAEFGACHRNEPSGALHGIMRVRAFTQDDAHIFCTEDQVQSEAAEYFKLQ-LG 411 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ LG I ++ P + E D + D Sbjct: 412 VYKDLGFDQISVKLALRPDVRTGADE-----------------LWDRAEGALAQALRDAG 454 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y + H L D++ + + + A++ Sbjct: 455 LEYEELPGEGAFYGPKVEFH---LTDAIGRTWQCGTLQYDPNLP--------ERLDASYI 503 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG H + +G+M ++ + GK +W V ++ Sbjct: 504 GEDGARHRPIMLHRAILGSMERFIGMLIEHYAGKFPLWLSPVQVTVATIT------SEAD 557 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D ++ L + G V D E+I + L PL ++VG + + V ++ Sbjct: 558 DYAVEVAKLLKRKGLRVELDTRNEKINLKVREHSLQKVPLMLVVGKREAEERTVALRVLG 617 Query: 423 TGIREDMSLEEVINYASH 440 +E ++L++ + Sbjct: 618 GKDQEILALDDAVAKLIE 635 >gi|300691315|ref|YP_003752310.1| threonine tRNA synthetase [Ralstonia solanacearum PSI07] gi|299078375|emb|CBJ51025.1| threonine tRNA synthetase [Ralstonia solanacearum PSI07] Length = 635 Score = 260 bits (663), Expect = 5e-67, Method: Composition-based stats. Identities = 74/444 (16%), Positives = 145/444 (32%), Gaps = 41/444 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD +L L + + + G+ W P G + V +R + Sbjct: 229 EAYLHMLEEAEKRDHRKLGKQLDLF--HLQEEAPGMVFWHPKGWEIWQAVEQYMRGRLSN 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW SG + +Y + M + + + P + IF ++ Sbjct: 287 AGYREVRTPQVMDRTLWEHSGHWQNYKENMF-VTESEKREYAIKPMNCPGHVQIFNHGLR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F+ DA+ F T Sbjct: 346 SYRDLPLRLAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFC-TEGQIMAEARDFNDLAF 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G +++ ++ P + D D T Sbjct: 405 SVYEDFGFENVAVKLALRPDKR-----------------AGTDDIWDHAEEGLRTALRAC 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + H + D++ + + +++ G A + Sbjct: 448 GVEWEELPGEGAFYGPKVEYH---IKDAIGRSWQCGTLQLDLVLPERLG--------AEY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D + +G+ ++ +H G +W +S+ Sbjct: 497 VAEDNSRKRPVMLHRAILGSFERFLGILLENHAGALPLWLAPEQVVVMSIA------DAH 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + + L K G D E+I + L P V+VG K ++V ++ R Sbjct: 551 AEYAQSVAQSLQKQGFRASADLRNEKITYKIREHSLQKVPYLVVVGDKERDGNQVAVRAR 610 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 M + + + +N Sbjct: 611 GNVDLGSMPVSAFVERLQNDLANK 634 >gi|82777067|ref|YP_403416.1| threonyl-tRNA synthetase [Shigella dysenteriae Sd197] gi|123755748|sp|Q32FI0|SYT_SHIDS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|81241215|gb|ABB61925.1| threonine tRNA synthetase [Shigella dysenteriae Sd197] Length = 642 Score = 260 bits (663), Expect = 5e-67, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNGCIRLVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ D Sbjct: 500 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT------DSQSD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +LS G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 614 KELGSMDVNEVIEKLQQEIRSR 635 >gi|154502817|ref|ZP_02039877.1| hypothetical protein RUMGNA_00631 [Ruminococcus gnavus ATCC 29149] gi|153796700|gb|EDN79120.1| hypothetical protein RUMGNA_00631 [Ruminococcus gnavus ATCC 29149] Length = 642 Score = 260 bits (663), Expect = 5e-67, Method: Composition-based stats. Identities = 89/442 (20%), Positives = 159/442 (35%), Gaps = 42/442 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L M+ G +LP G + + RE + G Sbjct: 230 YLNMLEEAKKRDHRKLGKELGLF--MMRDEGPGFPFFLPNGMVLKNVLLDYWREIHRKAG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+S P + S LW SG +D Y + M +++ P + +++ +SY Sbjct: 288 YVEISTPVMLSRHLWETSGHWDHYKENMYT-TVIDEEDFAIKPMNCPGGILAYQAEPRSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R E + G+MR R F DA+ F + K + Sbjct: 347 RDLPIRMGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTPDQIKDE--IKGVAGLINE 404 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + L + + P S E + + DD+ Sbjct: 405 VYSLFGFKYHVELSTRPEDSMGSDE-----------------DWEMATDALRGALDDLGL 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H E DS+ + ++ F ++ + G Sbjct: 448 PYVVNEGDGAFYGPKIDFHLE---DSIGRTWQCGTIQLD----FQLPLRF----ELEYTG 496 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + G++ ++ G W +AP ++ ++ I + Sbjct: 497 ADGEKHRPIMIHRVVFGSIERFIGILIEHFAGAFPTW---LAPVQVKVLPISDK---YLE 550 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + +L+ G D E+IG + A + P ++VG+K + KV ++ R Sbjct: 551 YGQSVLDQLNAAGIRAEIDTRAEKIGYKIREAQMKKIPYMLVVGAKEEEEKKVSVRSRFA 610 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G LEE I + Sbjct: 611 GDEGQKGLEEFIAAIMEETAKK 632 >gi|312898595|ref|ZP_07757985.1| threonyl-tRNA synthetase [Megasphaera micronuciformis F0359] gi|310620514|gb|EFQ04084.1| threonyl-tRNA synthetase [Megasphaera micronuciformis F0359] Length = 635 Score = 260 bits (663), Expect = 5e-67, Method: Composition-based stats. Identities = 88/449 (19%), Positives = 160/449 (35%), Gaps = 42/449 (9%) Query: 2 RRSKY--FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 ++S +L + +E R D ++ L + H+ G + P G + Sbjct: 224 KQSSLDEYLKLREEAERRDHRKLGKEMDLFS--FHEEGPGFPFFHPKGMLLRQTLLKFWN 281 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 E +R ++S P + + LW +SG +D Y + M +D+ P + ++ Sbjct: 282 ELHDRYEYDQISTPIILNRQLWEQSGHWDHYRENM-YFTTIDDEPYAIKPMNCPGGILVY 340 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +S++ SYR+ P ++ L R EL G+ R R F DA+ F L P K + Sbjct: 341 KSNVHSYRDFPMRTAELGLVHRHELHGALHGLFRVRSFTQDDAHIFML-PSQMKKEITGV 399 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 + + GL + + P S E D + Sbjct: 400 LDLFDEAYKMFGLPYH-VELSTRPENSMGSDE-----------------IWDLATQTLKE 441 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 ++ I E A Y D H + DS+ R + G I Sbjct: 442 AIEEKGVPYQINEGDGAFYGPKLDFH---VKDSIG-------RTWQCGTI-QLDMLMPER 490 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ G DG+ H M + I + +P +AP ++ ++ I Sbjct: 491 FDMTYVGEDGQKHRPVMVHRAC--FGSIERFIGILIEHYAGAFPVWLAPTQVKILPI--- 545 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + D ++ + K G V D+ E+IG + A + P ++G K V + V Sbjct: 546 SEKQMDYAVELRKKFKKAGIRVELDESNEKIGYKIRKAQMEKVPYMCVIGEKEVQEQTVS 605 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNNR 446 ++ R G +++E I + + + Sbjct: 606 VRDRSQGDLGSRNVDEFIAHIQELSESRK 634 >gi|237731269|ref|ZP_04561750.1| threonyl-tRNA synthetase [Citrobacter sp. 30_2] gi|226906808|gb|EEH92726.1| threonyl-tRNA synthetase [Citrobacter sp. 30_2] Length = 642 Score = 259 bits (662), Expect = 5e-67, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 142/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDE-VNACIRMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 451 PFEFQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + V + +G+M ++ G W V +++ + Sbjct: 500 ENNERQVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNIT------DSQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + EVI + Sbjct: 614 KDLGSLDVNEVIEKLQQEIRSR 635 >gi|324119204|gb|EGC13092.1| threonyl-tRNA synthetase [Escherichia coli E1167] Length = 642 Score = 259 bits (662), Expect = 5e-67, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNGCIRLVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ + Sbjct: 500 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT------DSQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +LS G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 614 KDLGSMDVNEVIEKLQQEIRSR 635 >gi|193065767|ref|ZP_03046830.1| threonyl-tRNA synthetase [Escherichia coli E22] gi|194428543|ref|ZP_03061082.1| threonyl-tRNA synthetase [Escherichia coli B171] gi|218554286|ref|YP_002387199.1| threonyl-tRNA synthetase [Escherichia coli IAI1] gi|260844071|ref|YP_003221849.1| threonyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009] gi|260855585|ref|YP_003229476.1| threonyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368] gi|260868246|ref|YP_003234648.1| threonyl-tRNA synthetase [Escherichia coli O111:H- str. 11128] gi|293446093|ref|ZP_06662515.1| threonyl-tRNA synthetase [Escherichia coli B088] gi|331668404|ref|ZP_08369252.1| threonine--tRNA ligase [Escherichia coli TA271] gi|331677592|ref|ZP_08378267.1| threonine--tRNA ligase [Escherichia coli H591] gi|226701402|sp|B7M1C7|SYT_ECO8A RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|192926539|gb|EDV81170.1| threonyl-tRNA synthetase [Escherichia coli E22] gi|194413421|gb|EDX29704.1| threonyl-tRNA synthetase [Escherichia coli B171] gi|195182909|dbj|BAG66479.1| threonyl-tRNA synthetase [Escherichia coli O111:H-] gi|218361054|emb|CAQ98632.2| threonyl-tRNA synthetase [Escherichia coli IAI1] gi|257754234|dbj|BAI25736.1| threonyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368] gi|257759218|dbj|BAI30715.1| threonyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009] gi|257764602|dbj|BAI36097.1| threonyl-tRNA synthetase [Escherichia coli O111:H- str. 11128] gi|291322923|gb|EFE62351.1| threonyl-tRNA synthetase [Escherichia coli B088] gi|323153043|gb|EFZ39312.1| threonyl-tRNA synthetase [Escherichia coli EPECa14] gi|331063598|gb|EGI35509.1| threonine--tRNA ligase [Escherichia coli TA271] gi|331074052|gb|EGI45372.1| threonine--tRNA ligase [Escherichia coli H591] Length = 642 Score = 259 bits (662), Expect = 5e-67, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNGCIRLVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ + Sbjct: 500 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT------DSQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +LS G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 614 KDLGSMDVNEVIEKLQQEIRSR 635 >gi|16764684|ref|NP_460299.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167991842|ref|ZP_02572941.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168244449|ref|ZP_02669381.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194448321|ref|YP_002045340.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197262906|ref|ZP_03162980.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|22654123|sp|Q8ZPS9|SYT_SALTY RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238690646|sp|B4TGH1|SYT_SALHS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|16419852|gb|AAL20258.1| threonine tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194406625|gb|ACF66844.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197241161|gb|EDY23781.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205329759|gb|EDZ16523.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205336802|gb|EDZ23566.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|261246542|emb|CBG24352.1| ThrRS [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993213|gb|ACY88098.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157870|emb|CBW17364.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912318|dbj|BAJ36292.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321223961|gb|EFX49024.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323129604|gb|ADX17034.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332988221|gb|AEF07204.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 642 Score = 259 bits (662), Expect = 5e-67, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 142/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDE-VNACIRMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPDKRIGSDE-----------------MWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ + Sbjct: 500 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNIT------DSQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + +VI + Sbjct: 614 KDLGSLDVNDVIEKLQQEIRSR 635 >gi|161614260|ref|YP_001588225.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194446059|ref|YP_002040590.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|198243456|ref|YP_002215793.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|207857160|ref|YP_002243811.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|189083620|sp|A9N243|SYT_SALPB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238690315|sp|B5FJA8|SYT_SALDC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238690400|sp|B5QVW8|SYT_SALEP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238693615|sp|B4T4M8|SYT_SALNS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|161363624|gb|ABX67392.1| hypothetical protein SPAB_02005 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194404722|gb|ACF64944.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197937972|gb|ACH75305.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|206708963|emb|CAR33293.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 642 Score = 259 bits (662), Expect = 5e-67, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 142/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDE-VNACIRMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPDKRIGSDE-----------------MWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ + Sbjct: 500 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNIT------DSQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + +VI + Sbjct: 614 KDLGSLDVNDVIEKLQQEIRSR 635 >gi|43066|emb|CAA23560.1| unnamed protein product [Escherichia coli] Length = 642 Score = 259 bits (662), Expect = 5e-67, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNGCIRLVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ + Sbjct: 500 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT------DSQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +LS G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 614 KDLGSMDVNEVIEKLQQEIRSR 635 >gi|303257521|ref|ZP_07343533.1| threonine--tRNA ligase [Burkholderiales bacterium 1_1_47] gi|331000214|ref|ZP_08323898.1| threonine--tRNA ligase [Parasutterella excrementihominis YIT 11859] gi|302859491|gb|EFL82570.1| threonine--tRNA ligase [Burkholderiales bacterium 1_1_47] gi|329572380|gb|EGG54033.1| threonine--tRNA ligase [Parasutterella excrementihominis YIT 11859] Length = 641 Score = 259 bits (662), Expect = 6e-67, Method: Composition-based stats. Identities = 82/444 (18%), Positives = 150/444 (33%), Gaps = 39/444 (8%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + G+ W G V +R Sbjct: 231 YLHMLEEAEKRDHRRLGKELDLF--HFQEEAPGLIFWHARGWALWQQVEQYMRRVYQDND 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L LW +SG + Y + M + ++ P + IF S ++SY Sbjct: 289 YQEVKAPQLLDRSLWEKSGHWSKYKENMFT-TESENRYYALKPMNCPGHIQIFNSAVRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F D + F + ++ Sbjct: 348 RDLPIRYGEFGACHRNEPSGSLHGLMRVRGFTQDDGHIFCTEDQILSECTAYT-KLVQKV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I + + P D + D Sbjct: 407 YADYGFTDISYKIATRPEKR-----------------IGDDATWDKAEKALMDALDASGI 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I+ A Y + H L DSL + ++ G +Y Sbjct: 450 KYDILPGEGAFYGPKIEYH---LRDSLGRGWQCGTIQVDFQMPARLGAEY-------VTE 499 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 ++G+ V + +G++ ++ + P +AP ++++ NI D Sbjct: 500 SNGRATPVMLHRAIVGSLERFIGMLL---EHYAGQLPPWLAPVQVAVANIT---DDQADY 553 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ + L K G D +I + L P ++VG+K ++ KV ++ R Sbjct: 554 AKEVVSMLKKAGLRAEADLRNGKITYKIRELSLQKLPYILVVGAKEKAEGKVAVRVRGGK 613 Query: 425 IREDMSLEEVINYASHRFSNNRPV 448 MS+E+ I + R V Sbjct: 614 DLGAMSVEDFIKLVQEDVATRRNV 637 >gi|157158126|ref|YP_001463015.1| threonyl-tRNA synthetase [Escherichia coli E24377A] gi|157161181|ref|YP_001458499.1| threonyl-tRNA synthetase [Escherichia coli HS] gi|170019932|ref|YP_001724886.1| threonyl-tRNA synthetase [Escherichia coli ATCC 8739] gi|193068904|ref|ZP_03049863.1| threonyl-tRNA synthetase [Escherichia coli E110019] gi|209919078|ref|YP_002293162.1| threonyl-tRNA synthetase [Escherichia coli SE11] gi|218695280|ref|YP_002402947.1| threonyl-tRNA synthetase [Escherichia coli 55989] gi|256018088|ref|ZP_05431953.1| threonyl-tRNA synthetase [Shigella sp. D9] gi|332279130|ref|ZP_08391543.1| threonyl-tRNA synthetase [Shigella sp. D9] gi|166987321|sp|A7ZMI6|SYT_ECO24 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166987322|sp|A8A0R2|SYT_ECOHS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189083607|sp|B1IPK9|SYT_ECOLC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238065113|sp|B6IBD7|SYT_ECOSE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783522|sp|B7L6J2|SYT_ECO55 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157066861|gb|ABV06116.1| threonyl-tRNA synthetase [Escherichia coli HS] gi|157080156|gb|ABV19864.1| threonyl-tRNA synthetase [Escherichia coli E24377A] gi|169754860|gb|ACA77559.1| threonyl-tRNA synthetase [Escherichia coli ATCC 8739] gi|192957699|gb|EDV88143.1| threonyl-tRNA synthetase [Escherichia coli E110019] gi|209912337|dbj|BAG77411.1| threonyl-tRNA synthase [Escherichia coli SE11] gi|218352012|emb|CAU97745.1| threonyl-tRNA synthetase [Escherichia coli 55989] gi|320197902|gb|EFW72510.1| Threonyl-tRNA synthetase [Escherichia coli EC4100B] gi|323948091|gb|EGB44082.1| threonyl-tRNA synthetase [Escherichia coli H120] gi|324016472|gb|EGB85691.1| threonyl-tRNA synthetase [Escherichia coli MS 117-3] gi|332101482|gb|EGJ04828.1| threonyl-tRNA synthetase [Shigella sp. D9] Length = 642 Score = 259 bits (662), Expect = 6e-67, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNGCIRLVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ D Sbjct: 500 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT------DSQSD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +LS G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 614 KDLGSMDVNEVIEKLQQEIRSR 635 >gi|301303993|ref|ZP_07210111.1| threonyl-tRNA synthetase [Escherichia coli MS 124-1] gi|300840790|gb|EFK68550.1| threonyl-tRNA synthetase [Escherichia coli MS 124-1] Length = 429 Score = 259 bits (662), Expect = 6e-67, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 19 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 76 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 77 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 135 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 136 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNGCIRLVYDM 194 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 195 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 237 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 238 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 286 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ D Sbjct: 287 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT------DSQSD 340 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +LS G V D E+IG + L P ++ G K V KV ++ R Sbjct: 341 YVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 400 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 401 KDLGSMDVNEVIEKLQQEIRSR 422 >gi|16760562|ref|NP_456179.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141677|ref|NP_805019.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|167552305|ref|ZP_02346058.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168239001|ref|ZP_02664059.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168821978|ref|ZP_02833978.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194736705|ref|YP_002114350.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251550|ref|YP_002146704.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|200390235|ref|ZP_03216846.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204927743|ref|ZP_03218944.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|213423451|ref|ZP_03356434.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213426331|ref|ZP_03359081.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213852224|ref|ZP_03381756.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|238910851|ref|ZP_04654688.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|22654121|sp|Q8Z6I2|SYT_SALTI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238690055|sp|B5F7G2|SYT_SALA4 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238693694|sp|B4TUF0|SYT_SALSV RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|25292951|pir||AC0706 threonine-tRNA ligase (EC 6.1.1.3) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502858|emb|CAD02020.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi] gi|29137305|gb|AAO68868.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|194712207|gb|ACF91428.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197215253|gb|ACH52650.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197288252|gb|EDY27637.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199602680|gb|EDZ01226.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204323085|gb|EDZ08281.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205323017|gb|EDZ10856.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205341550|gb|EDZ28314.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320086187|emb|CBY95961.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322620023|gb|EFY16896.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622333|gb|EFY19178.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627857|gb|EFY24647.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633045|gb|EFY29788.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636709|gb|EFY33412.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641265|gb|EFY37906.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645254|gb|EFY41783.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650195|gb|EFY46609.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655769|gb|EFY52071.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660095|gb|EFY56334.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665338|gb|EFY61526.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669596|gb|EFY65744.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673522|gb|EFY69624.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677448|gb|EFY73512.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679887|gb|EFY75926.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687359|gb|EFY83331.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192477|gb|EFZ77707.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198668|gb|EFZ83769.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204096|gb|EFZ89110.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208715|gb|EFZ93653.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210228|gb|EFZ95127.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217691|gb|EGA02406.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220245|gb|EGA04700.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223489|gb|EGA07815.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229493|gb|EGA13616.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232716|gb|EGA16812.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240245|gb|EGA24289.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242767|gb|EGA26788.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249083|gb|EGA33002.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254416|gb|EGA38233.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255600|gb|EGA39356.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260123|gb|EGA43748.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267113|gb|EGA50598.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271563|gb|EGA54984.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 642 Score = 259 bits (662), Expect = 6e-67, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 142/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDE-VNACIRMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPDKRIGSDE-----------------MWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ + Sbjct: 500 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNIT------DSQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + +VI + Sbjct: 614 KDLGSLDVNDVIEKLQQEIRSR 635 >gi|168233251|ref|ZP_02658309.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194472380|ref|ZP_03078364.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194458744|gb|EDX47583.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205332671|gb|EDZ19435.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 642 Score = 259 bits (662), Expect = 6e-67, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 142/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDE-VNACIRMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPDKRIGSDE-----------------MWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ + Sbjct: 500 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNIT------DSQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + +VI + Sbjct: 614 KDLGSLDVNDVIEKLQQEIRSR 635 >gi|62179922|ref|YP_216339.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|168263848|ref|ZP_02685821.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168463268|ref|ZP_02697199.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|73919823|sp|Q57PV3|SYT_SALCH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|62127555|gb|AAX65258.1| threonine tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|195634423|gb|EDX52775.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205347615|gb|EDZ34246.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|322714388|gb|EFZ05959.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 642 Score = 259 bits (662), Expect = 6e-67, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 142/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDE-VNACIRMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPDKRIGSDE-----------------MWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ + Sbjct: 500 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNIT------DSQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + +VI + Sbjct: 614 KDLGSLDVNDVIEKLQQEIRSR 635 >gi|16129675|ref|NP_416234.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655] gi|24112885|ref|NP_707395.1| threonyl-tRNA synthetase [Shigella flexneri 2a str. 301] gi|26247970|ref|NP_754010.1| threonyl-tRNA synthetase [Escherichia coli CFT073] gi|30063014|ref|NP_837185.1| threonyl-tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|74311961|ref|YP_310380.1| threonyl-tRNA synthetase [Shigella sonnei Ss046] gi|89108559|ref|AP_002339.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110] gi|91210933|ref|YP_540919.1| threonyl-tRNA synthetase [Escherichia coli UTI89] gi|110641840|ref|YP_669570.1| threonyl-tRNA synthetase [Escherichia coli 536] gi|110805471|ref|YP_688991.1| threonyl-tRNA synthetase [Shigella flexneri 5 str. 8401] gi|117623893|ref|YP_852806.1| threonyl-tRNA synthetase [Escherichia coli APEC O1] gi|170081377|ref|YP_001730697.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B] gi|170680212|ref|YP_001743530.1| threonyl-tRNA synthetase [Escherichia coli SMS-3-5] gi|188492265|ref|ZP_02999535.1| threonyl-tRNA synthetase [Escherichia coli 53638] gi|191171752|ref|ZP_03033299.1| threonyl-tRNA synthetase [Escherichia coli F11] gi|194435142|ref|ZP_03067376.1| threonyl-tRNA synthetase [Shigella dysenteriae 1012] gi|194438580|ref|ZP_03070669.1| threonyl-tRNA synthetase [Escherichia coli 101-1] gi|215486938|ref|YP_002329369.1| threonyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69] gi|218558588|ref|YP_002391501.1| threonyl-tRNA synthetase [Escherichia coli S88] gi|218689663|ref|YP_002397875.1| threonyl-tRNA synthetase [Escherichia coli ED1a] gi|218699714|ref|YP_002407343.1| threonyl-tRNA synthetase [Escherichia coli IAI39] gi|218705218|ref|YP_002412737.1| threonyl-tRNA synthetase [Escherichia coli UMN026] gi|237705668|ref|ZP_04536149.1| threonyl-tRNA synthetase [Escherichia sp. 3_2_53FAA] gi|238900934|ref|YP_002926730.1| threonyl-tRNA synthetase [Escherichia coli BW2952] gi|253773326|ref|YP_003036157.1| threonyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161779|ref|YP_003044887.1| threonyl-tRNA synthetase [Escherichia coli B str. REL606] gi|256022617|ref|ZP_05436482.1| threonyl-tRNA synthetase [Escherichia sp. 4_1_40B] gi|293405218|ref|ZP_06649210.1| threonyl-tRNA synthetase [Escherichia coli FVEC1412] gi|293410035|ref|ZP_06653611.1| threonyl-tRNA synthetase [Escherichia coli B354] gi|293415037|ref|ZP_06657680.1| threonyl-tRNA synthetase [Escherichia coli B185] gi|297517244|ref|ZP_06935630.1| threonyl-tRNA synthetase [Escherichia coli OP50] gi|298380861|ref|ZP_06990460.1| threonyl-tRNA synthetase [Escherichia coli FVEC1302] gi|300938947|ref|ZP_07153648.1| threonyl-tRNA synthetase [Escherichia coli MS 21-1] gi|300987614|ref|ZP_07178286.1| threonyl-tRNA synthetase [Escherichia coli MS 200-1] gi|300994418|ref|ZP_07180923.1| threonyl-tRNA synthetase [Escherichia coli MS 45-1] gi|301017728|ref|ZP_07182383.1| threonyl-tRNA synthetase [Escherichia coli MS 69-1] gi|301025270|ref|ZP_07188835.1| threonyl-tRNA synthetase [Escherichia coli MS 196-1] gi|306815028|ref|ZP_07449184.1| threonyl-tRNA synthetase [Escherichia coli NC101] gi|307138378|ref|ZP_07497734.1| threonyl-tRNA synthetase [Escherichia coli H736] gi|312966921|ref|ZP_07781139.1| threonyl-tRNA synthetase [Escherichia coli 2362-75] gi|331642316|ref|ZP_08343451.1| threonine--tRNA ligase [Escherichia coli H736] gi|331653119|ref|ZP_08354124.1| threonine--tRNA ligase [Escherichia coli M718] gi|67473036|sp|P0A8M3|SYT_ECOLI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|67473037|sp|P0A8M4|SYT_ECOL6 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|67473038|sp|P0A8M5|SYT_SHIFL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|122957455|sp|Q0T4S9|SYT_SHIF8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123084457|sp|Q1RB76|SYT_ECOUT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123343967|sp|Q0THB0|SYT_ECOL5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123732358|sp|Q3Z267|SYT_SHISS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166223339|sp|A1ABQ2|SYT_ECOK1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226701400|sp|B7MAS9|SYT_ECO45 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226701401|sp|B7NT58|SYT_ECO7I RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226701403|sp|B7N556|SYT_ECOLU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226701404|sp|B1LE12|SYT_ECOSM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|229557979|sp|B1XGI1|SYT_ECODH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783521|sp|B7USA2|SYT_ECO27 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783523|sp|B7MVJ7|SYT_ECO81 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|259516437|sp|C4ZYI1|SYT_ECOBW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|5107656|pdb|1QF6|A Chain A, Structure Of E. Coli Threonyl-Trna Synthetase Complexed With Its Cognate Trna gi|26108373|gb|AAN80575.1|AE016761_150 Threonyl-tRNA synthetase [Escherichia coli CFT073] gi|1742811|dbj|BAA15498.1| threonyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110] gi|1788013|gb|AAC74789.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655] gi|24051829|gb|AAN43102.1| threonine tRNA synthetase [Shigella flexneri 2a str. 301] gi|30041263|gb|AAP16992.1| threonine tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|73855438|gb|AAZ88145.1| threonine tRNA synthetase [Shigella sonnei Ss046] gi|91072507|gb|ABE07388.1| threonyl-tRNA synthetase [Escherichia coli UTI89] gi|110343432|gb|ABG69669.1| threonyl-tRNA synthetase [Escherichia coli 536] gi|110615019|gb|ABF03686.1| threonine tRNA synthetase [Shigella flexneri 5 str. 8401] gi|115513017|gb|ABJ01092.1| threonine tRNA synthetase [Escherichia coli APEC O1] gi|169889212|gb|ACB02919.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B] gi|170517930|gb|ACB16108.1| threonyl-tRNA synthetase [Escherichia coli SMS-3-5] gi|188487464|gb|EDU62567.1| threonyl-tRNA synthetase [Escherichia coli 53638] gi|190908082|gb|EDV67674.1| threonyl-tRNA synthetase [Escherichia coli F11] gi|194416606|gb|EDX32741.1| threonyl-tRNA synthetase [Shigella dysenteriae 1012] gi|194422590|gb|EDX38588.1| threonyl-tRNA synthetase [Escherichia coli 101-1] gi|215265010|emb|CAS09396.1| threonyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69] gi|218365357|emb|CAR03078.1| threonyl-tRNA synthetase [Escherichia coli S88] gi|218369700|emb|CAR17469.1| threonyl-tRNA synthetase [Escherichia coli IAI39] gi|218427227|emb|CAR08113.2| threonyl-tRNA synthetase [Escherichia coli ED1a] gi|218432315|emb|CAR13205.1| threonyl-tRNA synthetase [Escherichia coli UMN026] gi|222033474|emb|CAP76215.1| Threonyl-tRNA synthetase [Escherichia coli LF82] gi|226900425|gb|EEH86684.1| threonyl-tRNA synthetase [Escherichia sp. 3_2_53FAA] gi|238863657|gb|ACR65655.1| threonyl-tRNA synthetase [Escherichia coli BW2952] gi|242377442|emb|CAQ32194.1| threonyl-tRNA synthetase [Escherichia coli BL21(DE3)] gi|253324370|gb|ACT28972.1| threonyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973680|gb|ACT39351.1| threonyl-tRNA synthetase [Escherichia coli B str. REL606] gi|253977874|gb|ACT43544.1| threonyl-tRNA synthetase [Escherichia coli BL21(DE3)] gi|260449158|gb|ACX39580.1| threonyl-tRNA synthetase [Escherichia coli DH1] gi|281600917|gb|ADA73901.1| Threonyl-tRNA synthetase [Shigella flexneri 2002017] gi|284921639|emb|CBG34711.1| threonyl-tRNA synthetase [Escherichia coli 042] gi|291427426|gb|EFF00453.1| threonyl-tRNA synthetase [Escherichia coli FVEC1412] gi|291432685|gb|EFF05664.1| threonyl-tRNA synthetase [Escherichia coli B185] gi|291470503|gb|EFF12987.1| threonyl-tRNA synthetase [Escherichia coli B354] gi|294493274|gb|ADE92030.1| threonyl-tRNA synthetase [Escherichia coli IHE3034] gi|298278303|gb|EFI19817.1| threonyl-tRNA synthetase [Escherichia coli FVEC1302] gi|299880135|gb|EFI88346.1| threonyl-tRNA synthetase [Escherichia coli MS 196-1] gi|300306094|gb|EFJ60614.1| threonyl-tRNA synthetase [Escherichia coli MS 200-1] gi|300400020|gb|EFJ83558.1| threonyl-tRNA synthetase [Escherichia coli MS 69-1] gi|300406264|gb|EFJ89802.1| threonyl-tRNA synthetase [Escherichia coli MS 45-1] gi|300456146|gb|EFK19639.1| threonyl-tRNA synthetase [Escherichia coli MS 21-1] gi|305851676|gb|EFM52129.1| threonyl-tRNA synthetase [Escherichia coli NC101] gi|307553740|gb|ADN46515.1| threonine tRNA synthetase [Escherichia coli ABU 83972] gi|307626794|gb|ADN71098.1| threonyl-tRNA synthetase [Escherichia coli UM146] gi|309701942|emb|CBJ01255.1| threonyl-tRNA synthetase [Escherichia coli ETEC H10407] gi|312288385|gb|EFR16287.1| threonyl-tRNA synthetase [Escherichia coli 2362-75] gi|315136359|dbj|BAJ43518.1| threonyl-tRNA synthetase [Escherichia coli DH1] gi|315286432|gb|EFU45867.1| threonyl-tRNA synthetase [Escherichia coli MS 110-3] gi|315290480|gb|EFU49854.1| threonyl-tRNA synthetase [Escherichia coli MS 153-1] gi|320181253|gb|EFW56172.1| Threonyl-tRNA synthetase [Shigella boydii ATCC 9905] gi|320194570|gb|EFW69201.1| Threonyl-tRNA synthetase [Escherichia coli WV_060327] gi|323937321|gb|EGB33600.1| threonyl-tRNA synthetase [Escherichia coli E1520] gi|323940615|gb|EGB36806.1| threonyl-tRNA synthetase [Escherichia coli E482] gi|323952226|gb|EGB48099.1| threonyl-tRNA synthetase [Escherichia coli H252] gi|323956620|gb|EGB52358.1| threonyl-tRNA synthetase [Escherichia coli H263] gi|323962102|gb|EGB57698.1| threonyl-tRNA synthetase [Escherichia coli H489] gi|323973902|gb|EGB69074.1| threonyl-tRNA synthetase [Escherichia coli TA007] gi|323978098|gb|EGB73184.1| threonyl-tRNA synthetase [Escherichia coli TW10509] gi|324011501|gb|EGB80720.1| threonyl-tRNA synthetase [Escherichia coli MS 60-1] gi|331039114|gb|EGI11334.1| threonine--tRNA ligase [Escherichia coli H736] gi|331049217|gb|EGI21289.1| threonine--tRNA ligase [Escherichia coli M718] gi|332758628|gb|EGJ88947.1| threonyl-tRNA synthetase [Shigella flexneri 2747-71] gi|333003769|gb|EGK23305.1| threonyl-tRNA synthetase [Shigella flexneri VA-6] gi|333004377|gb|EGK23908.1| threonyl-tRNA synthetase [Shigella flexneri K-218] gi|333006570|gb|EGK26070.1| threonyl-tRNA synthetase [Shigella flexneri K-272] gi|333018789|gb|EGK38082.1| threonyl-tRNA synthetase [Shigella flexneri K-227] Length = 642 Score = 259 bits (662), Expect = 6e-67, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNGCIRLVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ + Sbjct: 500 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT------DSQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +LS G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 614 KDLGSMDVNEVIEKLQQEIRSR 635 >gi|292488129|ref|YP_003531006.1| threonyl-tRNA synthetase [Erwinia amylovora CFBP1430] gi|292899340|ref|YP_003538709.1| threonyl-tRNA synthetase [Erwinia amylovora ATCC 49946] gi|291199188|emb|CBJ46302.1| threonyl-tRNA synthetase [Erwinia amylovora ATCC 49946] gi|291553553|emb|CBA20598.1| Threonyl-tRNA synthetase [Erwinia amylovora CFBP1430] gi|312172261|emb|CBX80518.1| Threonyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158] Length = 642 Score = 259 bits (662), Expect = 6e-67, Method: Composition-based stats. Identities = 73/442 (16%), Positives = 141/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLLRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYE 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y + M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYKEAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDE-VNSCIKMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E ++T + Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDELWDRSET-----------------DLAAALKENGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ F + S A++ G Sbjct: 451 PFEYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+M ++ + G W + +++ + Sbjct: 500 ESNERQVPVMIHRAILGSMERFIGILTEEYAGFFPTWLAPLQVVVMNIT------DGQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVAELTRKLQNAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + E I + Sbjct: 614 KDLGSIDVNEAIAKLQDEIRSR 635 >gi|170768863|ref|ZP_02903316.1| threonyl-tRNA synthetase [Escherichia albertii TW07627] gi|170122411|gb|EDS91342.1| threonyl-tRNA synthetase [Escherichia albertii TW07627] Length = 642 Score = 259 bits (662), Expect = 6e-67, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNGCIRLVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ + Sbjct: 500 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT------DSQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +LS G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 614 KDLGSMDVNEVIEKLQQEIRSR 635 >gi|226954309|ref|ZP_03824773.1| threonyl-tRNA synthetase [Acinetobacter sp. ATCC 27244] gi|226834935|gb|EEH67318.1| threonyl-tRNA synthetase [Acinetobacter sp. ATCC 27244] Length = 640 Score = 259 bits (662), Expect = 6e-67, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD L L + + + G+ W G + +R+ Q G Sbjct: 231 YIKRIEEAEKRDHRKIGKALDLF--HMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +Y + M + P + +F +KSY Sbjct: 289 YQEIKTPQIVDFTLWEKSGHAANYAENMFT-THSESRNYAVKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + + L + Sbjct: 348 RDLPIRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGQE-VADFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + M+ + P D S DD Sbjct: 407 YKDFGFEEVQMKLSTRPEKR-----------------VGDDALWDIAEKSLADALDDAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + + A++ Sbjct: 450 AWDLQPGEGAFYGPKIEF---SLKDCLGRVWQCGTIQCDFNLPIRLD--------ASYVT 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + + +G+ ++ + P +AP + ++NI D Sbjct: 499 EDNERDQPVMLHRAILGSFERFIGILI---EHYAGFMPPWLAPIQACVMNITDS---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ACE++ A+L + G D E+IG + L P +++G + V + V ++ R Sbjct: 553 ACEQVVAKLKESGLRAISDLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS++ I+ + Sbjct: 613 KNLGTMSIDAFIDLVKSAVAER 634 >gi|229173066|ref|ZP_04300617.1| Threonyl-tRNA synthetase [Bacillus cereus MM3] gi|228610399|gb|EEK67670.1| Threonyl-tRNA synthetase [Bacillus cereus MM3] Length = 639 Score = 259 bits (662), Expect = 7e-67, Method: Composition-based stats. Identities = 75/443 (16%), Positives = 153/443 (34%), Gaps = 40/443 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 235 YLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEYK 292 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + +LW +SG + Y M ++ ++K+ P + +F++ + SY Sbjct: 293 YQEVRTPFMMNQELWEKSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHSY 351 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R E G++R R F DA+ +TPE + + + Sbjct: 352 RELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMAQIDYV 410 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G E+ V T + + + Sbjct: 411 YKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEEALENVLHSLNY 452 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H + D+L + + ++ F K+ + Sbjct: 453 KYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYID 501 Query: 305 ADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + +G++ A++ G W + + I + V Sbjct: 502 EKNEKRRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHVQ 556 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++I +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 557 YADEIADKLAQAGIRVERDVRDEKLGYKIREAQMQKVPYVLVIGDKEMENGSVNVRKYGE 616 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 E + L + N + Sbjct: 617 DQSEVIELNGFVESIKEEIKNKK 639 >gi|284801950|ref|YP_003413815.1| threonyl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284995092|ref|YP_003416860.1| threonyl-tRNA synthetase [Listeria monocytogenes 08-5923] gi|284057512|gb|ADB68453.1| threonyl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284060559|gb|ADB71498.1| threonyl-tRNA synthetase [Listeria monocytogenes 08-5923] Length = 640 Score = 259 bits (662), Expect = 7e-67, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 166/441 (37%), Gaps = 32/441 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 F+ + +E RD +L L T I + +G+ WLP G + I +++ R G Sbjct: 230 FIQMQKEAKERDHRKLGKELELFTNSI-EVGQGLPLWLPKGATIRRVIERYIVDKEERLG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I SY Sbjct: 289 YNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 R LP ++ L R E+ ++ + + + P+ K + ++ L ++ Sbjct: 349 RELPIRIAELGLMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIIS 244 + R D T+ + D M + + D++ Sbjct: 409 KDFDITDYSFRLS--------------YRDPKNTEKYFDDDAMWEKAQAMLKSAMDEMEM 454 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ ++ + + +S ++ F ++ T+ G Sbjct: 455 DYFEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LTYIG 503 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H + G + + + + +P +AP ++ +I + A D Sbjct: 504 EDGEKHRPVVIHR--GVVSTMERFVAYLIEEYKGAFPTWLAPVQMEIIPVNA--DAHLDY 559 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + +L + G DD E++G + A P +++G + V V ++ + Sbjct: 560 AKGVQDKLQRAGLRAEVDDRNEKLGYKIREAQTKKIPYALVLGDQEVEAGSVNVRRYGSK 619 Query: 425 IREDMSLEEVINYASHRFSNN 445 E M L+ I S Sbjct: 620 DSETMDLDAFIAQVVAEVSKY 640 >gi|262374306|ref|ZP_06067582.1| threonyl-tRNA synthetase [Acinetobacter junii SH205] gi|262310864|gb|EEY91952.1| threonyl-tRNA synthetase [Acinetobacter junii SH205] Length = 640 Score = 259 bits (662), Expect = 7e-67, Method: Composition-based stats. Identities = 79/441 (17%), Positives = 142/441 (32%), Gaps = 38/441 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD L L + + + G+ W G + +R+ Q G Sbjct: 231 YIKRIEEAEKRDHRKIGKALDLF--HMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +Y + M + P + +F +KSY Sbjct: 289 YQEIKTPQIVDFTLWEKSGHAANYAENMFT-THSESRNYAVKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + K L + Sbjct: 348 RDLPIRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGKE-VADFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + M+ + P D S DD Sbjct: 407 YKDFGFEEVQMKLSTRPEKR-----------------VGDDALWDLAEKSLADALDDAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + + Y Sbjct: 450 AWDLQPGEGAFYGPKIEF---SLKDCLGRVWQCGTIQCDFNLPIRLDASY-------VTE 499 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + +D V + +G+ ++ + P +AP + ++NI +A Sbjct: 500 ENERDQPVMLHRAILGSFERFIGILI---EHYAGFMPPWLAPVQACVMNITDS---QAEA 553 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++ A+L + G D E+IG + L P +++G + V + V ++ R Sbjct: 554 SEQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGK 613 Query: 425 IREDMSLEEVINYASHRFSNN 445 MS++ I+ + Sbjct: 614 NLGTMSVDAFIDLVKSAVAER 634 >gi|307310711|ref|ZP_07590357.1| threonyl-tRNA synthetase [Escherichia coli W] gi|331647210|ref|ZP_08348304.1| threonine--tRNA ligase [Escherichia coli M605] gi|331673269|ref|ZP_08374037.1| threonine--tRNA ligase [Escherichia coli TA280] gi|281178789|dbj|BAI55119.1| threonyl-tRNA synthetase [Escherichia coli SE15] gi|306908889|gb|EFN39385.1| threonyl-tRNA synthetase [Escherichia coli W] gi|315061024|gb|ADT75351.1| threonyl-tRNA synthetase [Escherichia coli W] gi|315299748|gb|EFU58988.1| threonyl-tRNA synthetase [Escherichia coli MS 16-3] gi|323378405|gb|ADX50673.1| threonyl-tRNA synthetase [Escherichia coli KO11] gi|330911523|gb|EGH40033.1| threonyl-tRNA synthetase [Escherichia coli AA86] gi|331043993|gb|EGI16129.1| threonine--tRNA ligase [Escherichia coli M605] gi|331069467|gb|EGI40854.1| threonine--tRNA ligase [Escherichia coli TA280] gi|332343438|gb|AEE56772.1| threonyl-tRNA synthetase ThrS [Escherichia coli UMNK88] Length = 642 Score = 259 bits (662), Expect = 7e-67, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNGCIRLVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ D Sbjct: 500 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT------DSQSD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +LS G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 614 KDLGSMDVNEVIEKLQQEIRSR 635 >gi|323968488|gb|EGB63894.1| threonyl-tRNA synthetase [Escherichia coli M863] Length = 642 Score = 259 bits (661), Expect = 7e-67, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 144/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNGCIRLVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G IW V +++ + Sbjct: 500 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPIWLAPVQVVIMNIT------DSQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +LS G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 614 KDLGSMDVNEVIEKLQQEIRSR 635 >gi|332284530|ref|YP_004416441.1| threonyl-tRNA synthetase [Pusillimonas sp. T7-7] gi|330428483|gb|AEC19817.1| threonyl-tRNA synthetase [Pusillimonas sp. T7-7] Length = 648 Score = 259 bits (661), Expect = 7e-67, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 138/445 (31%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +S Y + + RD +L L + G+ W P G V +R Sbjct: 233 QSAYLTMLEEAERRDHRKIGRELDLF--HFQDEAPGLIFWHPKGWTLWQQVEQYMRSVYR 290 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P + LW ++G +D+Y + M + ++ P + IF + + Sbjct: 291 DNGYQEVKAPQILDLSLWKKTGHWDNYAENMFT-TESENRVYGLKPMNCPGHVQIFNAGL 349 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR LP + + R+E G+MR R F D + F + Sbjct: 350 HSYRELPIRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQLQDEC-ADFTALL 408 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +++ G I + + P S E A+ + P E Sbjct: 409 QKVYADFGFTEILYKVATRPEKRIGSDEVWDKAEQALMESLSRTGCEYEVSPGE------ 462 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 A Y + L D++ + + ++ G A Sbjct: 463 -----------GAFYGPKIEY---TLKDAIGRHWQCGTIQVDFSMPQRLG--------AE 500 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + A + + +G+ ++ +H G +W + + Sbjct: 501 YVDATDQRRTPVMLHRAILGSFERFIGMLIENHAGAMPVWLAPEHAVVCCI------SES 554 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ L K G F D GE+I + + P ++VG K +V ++ Sbjct: 555 SADYAAEVALGLKKQGFRAFSDLRGEKITRKIREHSMQKIPYILVVGEKERESGQVAVRG 614 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R MSL + + Sbjct: 615 RGGVDLGVMSLNDFTVRLQQEIATR 639 >gi|299066586|emb|CBJ37776.1| threonine tRNA synthetase [Ralstonia solanacearum CMR15] Length = 635 Score = 259 bits (661), Expect = 7e-67, Method: Composition-based stats. Identities = 79/444 (17%), Positives = 150/444 (33%), Gaps = 41/444 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD L L + + + G+ W P G + V +R Sbjct: 229 EAYLHMLEEAEKRDHRKLGKVLDLF--HLQEEAPGMVFWHPKGWQIWQAVEQYMRGRLAG 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW SG +++Y + M + + + P + IF ++ Sbjct: 287 AGYSEVRTPQVMDRGLWERSGHWENYKENMF-VTESEKREYAIKPMNCPGHVQIFNHGLR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F+ DA+ F T Sbjct: 346 SYRDLPLRLAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFC-TEGQIMAEAKDFNDLAF 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G +++ ++ P S + A+ G + +P E Sbjct: 405 SVYEDFGFENVAVKLALRPDKRAGSDDIWDHAEDGLRTALRACGVEWEELPGE------- 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + H + D++ + + +++ G A + Sbjct: 458 ----------GAFYGPKVEYH---IKDAIGRSWQCGTLQLDLVLPERLG--------AEY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D + +G+ ++ +H G +W +S+ Sbjct: 497 VAEDNSRKRPVMLHRAILGSFERFLGILLENHAGALPLWLAPEQVVVMSIA------DAH 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + E + L K G F D E+I + L P V+VG K ++V ++ R Sbjct: 551 AEYAESVAQSLQKQGFRAFADLRNEKITYKIREHSLQKVPYLVVVGDKERDGNQVAVRAR 610 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 M + + + F+N Sbjct: 611 GNVDLGSMPVSTFVERLQNDFANK 634 >gi|315282482|ref|ZP_07870886.1| threonyl-tRNA synthetase [Listeria marthii FSL S4-120] gi|313613866|gb|EFR87606.1| threonyl-tRNA synthetase [Listeria marthii FSL S4-120] Length = 640 Score = 259 bits (661), Expect = 7e-67, Method: Composition-based stats. Identities = 79/441 (17%), Positives = 167/441 (37%), Gaps = 32/441 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 F+ + +E RD +L L T I + +G+ WLP G + I +++ R G Sbjct: 230 FIQMQKEAKERDHRKLGKELDLFTNSI-EVGQGLPLWLPKGATIRRVIERYIVDKEERLG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I SY Sbjct: 289 YNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 R LP ++ + R E+ ++ + + + P+ K + ++ L ++ Sbjct: 349 RELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIIS 244 +K R D T+ + D M S + D++ Sbjct: 409 KDFDIKDYSFRLS--------------YRDPKNTEKYFDDDAMWEKAQSMLKSAMDEMGM 454 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ ++ + + +S ++ F ++ T+ G Sbjct: 455 DYFEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LTYIG 503 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H + G + + + + +P +AP ++ LI + A + Sbjct: 504 EDGEKHRPVVIHR--GVVSTMERFVAYLIEEYKGAFPTWLAPVQMELIPVNA--DAHLNY 559 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + +L + G DD E++G + A P +++G + V V ++ + Sbjct: 560 AKGVQDKLQRAGLRSEVDDRNEKLGYKIREAQTKKIPYALVLGDQEVEAGSVNVRRYGSK 619 Query: 425 IREDMSLEEVINYASHRFSNN 445 E M L+ I S Sbjct: 620 DSETMDLDAFIAQVVAEVSKY 640 >gi|93007241|ref|YP_581678.1| threonyl-tRNA synthetase [Psychrobacter cryohalolentis K5] gi|123264359|sp|Q1Q809|SYT_PSYCK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|92394919|gb|ABE76194.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Psychrobacter cryohalolentis K5] Length = 644 Score = 259 bits (661), Expect = 7e-67, Method: Composition-based stats. Identities = 81/442 (18%), Positives = 141/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD L L + + + G+ W G + +R+ Q+ G Sbjct: 231 YIQRIEEAEKRDHRKIGKALNLF--HMQEQAPGMVFWHANGWTIYQVLEQYMRKVQHDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW SG + +Y M ++ P + +F +KSY Sbjct: 289 YEEIKTPQIVDRSLWERSGHWGNYATNMFT-TSSENRDYAVKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F T + L + Sbjct: 348 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TQSQIQQEVADFIKLTLAV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I M+ + P S E DF + D Sbjct: 407 YEDFGFDKIIMKLSTRPEKRVGSDE-----------------SWDFAEKALADALDSSGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + + A Y + L DSL + ++ + A F Sbjct: 450 DWAYLPGEGAFYGPKIEF---SLKDSLGRVWQCGTIQVDPNMP--------ERLDAEFVN 498 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + +G+ ++ ++ G +W +++ D Sbjct: 499 EQNEREVPIMLHRAILGSFERFIGILIENYAGWMPVWLAPQQVVVMNIT------DKQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ACE + L K G D E+IG + L P +++G K V + ++ R Sbjct: 553 ACENVVNELKKAGLRAISDLRNEKIGFKIREKTLERIPYMLVLGDKEVESGSINVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS+ E I + Sbjct: 613 ENLGVMSVAEFITLVEAAVAEK 634 >gi|126651397|ref|ZP_01723604.1| threonyl-tRNA synthetase [Bacillus sp. B14905] gi|126591926|gb|EAZ86009.1| threonyl-tRNA synthetase [Bacillus sp. B14905] Length = 643 Score = 259 bits (661), Expect = 7e-67, Method: Composition-based stats. Identities = 81/442 (18%), Positives = 171/442 (38%), Gaps = 32/442 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K+ L +L+E RD +L L T + +G+ WLP G + I +++ Sbjct: 232 KHHLQMLEEAKERDHRKIGKELELFTT-SQKVGQGLPLWLPNGATIRRVIERYIVDKELS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P L S +L+ SG +D Y + + +++ +I P + ++++ + Sbjct: 291 LGYKHVYTPVLGSKELYQTSGHWDHYQDSIFPPMEMDNETLIMRPMNCPHHMMVYKNSMH 350 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR+LP ++ R E+ ++ + + + P+ K + K+ L Sbjct: 351 SYRSLPLRIAELGTMHRYEMSGAVSGLQRVRGMTLNDAHIFVRPDQIKAEFQKVVQLILE 410 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ L R D +T+ + + D M S D++ Sbjct: 411 VYKDFDLNDYSFRLS--------------YRDPADTEKYFNDDAMWEKAQSMLKEAMDEL 456 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ ++ + + +S ++ F ++ ++ Sbjct: 457 GLDYFEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LSY 505 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DGK H + G + + + + +P +AP ++ +I + ++ Sbjct: 506 VGEDGKPHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVEVIPV--SNEAHF 561 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D ++I +L+ G V DD E++G + A + P +++G K V S V ++ Sbjct: 562 DYAKQIEEQLTAAGLRVEMDDREEKLGYKIREAQMKKIPYMLVIGDKEVEASGVNVRRYG 621 Query: 423 TGIREDMSLEEVINYASHRFSN 444 + E +S E + + Sbjct: 622 SKDSETISFENFLAAIKAEITK 643 >gi|319786721|ref|YP_004146196.1| threonyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1] gi|317465233|gb|ADV26965.1| threonyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1] Length = 634 Score = 259 bits (661), Expect = 8e-67, Method: Composition-based stats. Identities = 75/443 (16%), Positives = 149/443 (33%), Gaps = 41/443 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K ++ ++E RD + L + + + G+ W P G V +R Sbjct: 227 KQLKAYIQRIEEAEKRDHRRIGKQQDLF--HLQEEAPGLVFWHPKGWSVWQVVEQYMRRV 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 TG E+ P + LW +SG +D+Y M + + P + IF Sbjct: 285 YRETGYGEVRCPQILDVSLWKKSGHWDNYQDNMF-FTESEKRTYAVKPMNCPGHVQIFNQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 + SYR+LP + + R+E G++R R F D + F T + + Sbjct: 344 GLHSYRDLPIRYGEFGSCHRNEPSGALHGILRVRGFTQDDGHVFC-TEQQIESEVRAFHA 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L+++ G + I ++ P D + + Sbjct: 403 QALKVYTDFGFEDIQIKIALRPDNR-----------------LGDDATWDKAEDALRSAL 445 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + A Y + H L D++ ++ ++ G Sbjct: 446 RASGVEWQELPGEGAFYGPKIEYH---LKDAIGRTWQLGTMQVDFMMPGRLG-------- 494 Query: 300 ATFKGAD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + + + H V + +G+M ++ H G+ W V +++ Sbjct: 495 AEYVDENSQRRHPVMLHRAIVGSMERFIGILIEHHAGQFPAWLAPVQAVVMNIT------ 548 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 V + ++ L+ G V D E+IG + L P ++VG + + V + Sbjct: 549 DVQAEYVNEVRKVLANQGFRVEADLRNEKIGFKIREHTLQRVPYLLVVGDREKENGAVAV 608 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + R MS+ + + + Sbjct: 609 RTRSGEDLGTMSVSDFADTLRSQ 631 >gi|296388793|ref|ZP_06878268.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa PAb1] Length = 640 Score = 259 bits (661), Expect = 8e-67, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + + G+ W P G + +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRRIGKQLDLF--HLQEEAPGMVFWHPNGWSVYQVLEQYMRKVQRDHG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + P + IF +KSY Sbjct: 289 YVEVRTPQVVDRILWERSGHWSNYAENMFT-TSSESRDYAVKPMNCPCHVQIFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + K + L++ Sbjct: 348 RDLPLRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQVKKEA-ADFIKLTLQV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I M+ + P S E D + ++ Sbjct: 407 YRDFGFTDIAMKLSTRPAKRVGSDE-----------------LWDRAEGALADALNESGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L N + + + A++ Sbjct: 450 AWEYQPGEGAFYGPKIEF---TLKDCLGRNWQCGTLQYDPNLP--------ERLDASYIA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ + +P +AP + ++NI D Sbjct: 499 EDNNRKRPVMLHRAILGSFERFIGMLI---EHYAGAFPAWLAPTQAVVMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L + G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FAAEVVRMLGESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVESKAVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + + S Sbjct: 613 EDLGSMPVTQFAELLAQAVSRR 634 >gi|308186646|ref|YP_003930777.1| Threonyl-tRNA synthetase [Pantoea vagans C9-1] gi|308057156|gb|ADO09328.1| Threonyl-tRNA synthetase [Pantoea vagans C9-1] Length = 642 Score = 259 bits (661), Expect = 8e-67, Method: Composition-based stats. Identities = 71/442 (16%), Positives = 138/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y + M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYKEAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHVFCTEEQVRDE-VNSCIRMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P + E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGTDE-----------------MWDRAEEDLAAALNENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F + AT+ G Sbjct: 451 EFEFQPGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLP----KRLEATYVG 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + +G+M ++ G W + +++ + Sbjct: 500 ENNDRQTPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPLQVVVMNIT------DGQAE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E + +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVESLTRKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M ++ + + Sbjct: 614 KDLGSMDVDLFVEKLQQEIRSR 635 >gi|330502208|ref|YP_004379077.1| prolyl-tRNA synthetase [Pseudomonas mendocina NK-01] gi|328916494|gb|AEB57325.1| prolyl-tRNA synthetase [Pseudomonas mendocina NK-01] Length = 571 Score = 259 bits (661), Expect = 8e-67, Method: Composition-based stats. Identities = 119/237 (50%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L L+E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V ++REE Sbjct: 1 MRTSQFLLSTLKETPSDAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q A+LW ESGR+ YG E+LR+ DR+D+ GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPAIQPAELWQESGRWVQYGPELLRIKDRHDREFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFG+MR REFLMKDAYSF + +Y++M + Sbjct: 121 ELNSYKQLPINFYQIQTKFRDEIRPRFGLMRGREFLMKDAYSFHADQASLQETYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y +F RLGL P++A++G IGG SHEF VLAD+GE + S D+ E Sbjct: 181 YCNVFTRLGLNFRPVQADTGSIGGTGSHEFHVLADSGEDDIAFSDS-SDYAANIEKA 236 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ + V RGIEVGHIF GTKYS M Sbjct: 364 DDKHYFGVNWERDLPVPTVADLRNVVEGDPSPDGQGTLVIKRGIEVGHIFQLGTKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + G +GK + MG YGIG RVVAA IE + D +GI W D++APF I+L+ ++ Sbjct: 424 NCQVLGENGKPVTLTMGCYGIGVSRVVAAAIEQNFDERGIRWNDALAPFHIALVPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + R+A +K+YA L+ G DV DD + G +FA +L+G P +V+V + +++ K+ Sbjct: 484 EQVREATDKLYAELTAAGFDVLLDDRDKKTSPGIKFADMELIGIPHRVVVSDRGLAEGKL 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K R + + L E++++ R Sbjct: 544 EYKSRAETEAQAVPLAEILSFLQARIK 570 >gi|300703878|ref|YP_003745480.1| threonine tRNA synthetase [Ralstonia solanacearum CFBP2957] gi|299071541|emb|CBJ42865.1| threonine tRNA synthetase [Ralstonia solanacearum CFBP2957] Length = 635 Score = 259 bits (661), Expect = 8e-67, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 148/444 (33%), Gaps = 41/444 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD +L L + + + G+ W P G + V +R Sbjct: 229 EAYLHMLEEAEKRDHRKLGKQLDLF--HLQEEAPGMVFWHPKGWQIWQAVEQYMRGRLAG 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW SG + +Y + M + + + P + IF ++ Sbjct: 287 AGYSEVRTPQVMDRTLWEHSGHWQNYKENMF-VTESEKREYAIKPMNCPGHVQIFNHGLR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F+ DA+ F T Sbjct: 346 SYRDLPLRLAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFC-TEGQIMAEAKDFNDLAF 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G +++ ++ P + E A+ G + +P E Sbjct: 405 SVYEDFGFENVAVKLALRPDKRAGTDEIWDHAEEGLRTALRACGVEWEELPGE------- 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + H + D++ + + +++ G A + Sbjct: 458 ----------GAFYGPKVEYH---IKDAIGRSWQCGTLQLDLVLPERLG--------AEY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D + +G+ ++ +H G +W +S+ Sbjct: 497 VSEDNSRKRPVMLHRAILGSFERFLGILLENHAGALPLWLAPEQVVVMSIA------DAH 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + + L K G D E+I + L P V+VG K ++V ++ R Sbjct: 551 AEYVQTVAQSLQKQGFRASADLRNEKITYKIREHSLQKVPYLVVVGDKERDGNQVAVRAR 610 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 M + + + +N Sbjct: 611 GNVDLGSMPISAFVERLQNDLANK 634 >gi|169829542|ref|YP_001699700.1| threonyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41] gi|168994030|gb|ACA41570.1| Threonyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41] Length = 643 Score = 259 bits (661), Expect = 8e-67, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 170/442 (38%), Gaps = 32/442 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K+ L +L+E RD +L L T + +G+ WLP G + I +++ Sbjct: 232 KHHLQMLEEAKERDHRKIGKELELFTT-SQKVGQGLPLWLPNGATIRRVIERYIVDKELS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P L S +L+ SG +D Y + + +++ +I P + ++++ + Sbjct: 291 LGYKHVYTPVLGSKELYQTSGHWDHYQDSIFPPMEMDNETLIMRPMNCPHHMMVYKNSMH 350 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR+LP ++ R E+ ++ + + + P+ K + K+ L Sbjct: 351 SYRSLPLRIAELGTMHRYEMSGAVSGLQRVRGMTLNDAHIFVRPDQIKAEFQKVVQLILE 410 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ L R D +T+ + + D M S D++ Sbjct: 411 VYKDFDLNDYSFRLS--------------YRDPADTEKYFNDDAMWEKAQSMLKEAMDEL 456 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ ++ + + +S ++ F ++ ++ Sbjct: 457 GLDYFEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LSY 505 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DGK H + G + + + + +P +AP ++ +I + ++ Sbjct: 506 VGEDGKPHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVEVIPV--SNEAHF 561 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D ++I +L+ G V DD E++G + A + P +++G K V V ++ Sbjct: 562 DYAKQIEEQLTAAGLRVEMDDREEKLGYKIREAQMKKIPYMLVIGDKEVEAKGVNVRRYG 621 Query: 423 TGIREDMSLEEVINYASHRFSN 444 + E +S E + + Sbjct: 622 SKDSETISFENFLAAIKAEITK 643 >gi|56413681|ref|YP_150756.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362604|ref|YP_002142241.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|73919824|sp|Q5PH96|SYT_SALPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238689908|sp|B5BA42|SYT_SALPK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56127938|gb|AAV77444.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094081|emb|CAR59581.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 642 Score = 259 bits (661), Expect = 8e-67, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 142/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDE-VNACIRMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPDKRIGSDE-----------------MWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ + Sbjct: 500 EDNERKVPVIIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNIT------DSQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + +VI + Sbjct: 614 KDLGSLDVNDVIEKLQQEIRSR 635 >gi|327393701|dbj|BAK11123.1| Threonyl-tRNA synthetase ThrS [Pantoea ananatis AJ13355] Length = 642 Score = 259 bits (661), Expect = 8e-67, Method: Composition-based stats. Identities = 72/442 (16%), Positives = 137/442 (30%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQLRTE-VNSCIRMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------TWDRAEEDLAAALNENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F + AT+ G Sbjct: 451 EFEYQPGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLP----KRLDATYVG 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + +G+M ++ G W + +++ + Sbjct: 500 ENNDRQTPVMIHRAILGSMERFIGILTEEFAGFFPSWLAPMQAVVMNIT------DGQAE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E + +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVETLTRKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M ++ + + Sbjct: 614 KDLGSMDVDVFVEKLQQEIRSR 635 >gi|320173198|gb|EFW48409.1| Threonyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112] gi|320185858|gb|EFW60609.1| Threonyl-tRNA synthetase [Shigella flexneri CDC 796-83] gi|332096305|gb|EGJ01306.1| threonyl-tRNA synthetase [Shigella boydii 3594-74] Length = 622 Score = 259 bits (661), Expect = 8e-67, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 212 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 269 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 270 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 328 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 329 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNGCIRLVYDM 387 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 388 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 430 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 431 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 479 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ + Sbjct: 480 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT------DSQSE 533 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +LS G V D E+IG + L P ++ G K V KV ++ R Sbjct: 534 YVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 593 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 594 KDLGSMDVNEVIEKLQQEIRSR 615 >gi|225568704|ref|ZP_03777729.1| hypothetical protein CLOHYLEM_04783 [Clostridium hylemonae DSM 15053] gi|225162203|gb|EEG74822.1| hypothetical protein CLOHYLEM_04783 [Clostridium hylemonae DSM 15053] Length = 583 Score = 259 bits (661), Expect = 8e-67, Method: Composition-based stats. Identities = 83/437 (18%), Positives = 152/437 (34%), Gaps = 41/437 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L M G +LP G + + R+ R G Sbjct: 184 YLKRMEEARLRDHRKLGKELGLFAIM--DEGPGFPFFLPKGMVLKNLLIDYWRQLHLREG 241 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+S P + S LW SG +D Y M +++ P + +++ +SY Sbjct: 242 YVEISTPIILSRHLWENSGHWDHYKDNMYT-TVIDEEDYAVKPMNCPGGMLVYKVEPRSY 300 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 ++LP ++ L R E + G+MR R F DA+ F + + Sbjct: 301 KDLPMRVGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTEDQIRDEIKGVARLI---- 356 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + ++ V T S + +++ Sbjct: 357 ---------------DEVYSKFGFKYHVELSTRPENSMGSDADWEMATEGLRGALEELGM 401 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H E DS+ + ++ F ++ + G Sbjct: 402 DYVVNEGDGAFYGPKIDFHLE---DSIGRTWQCGTIQLD----FQMPQRF----ELEYTG 450 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + G++ ++ + GK W +AP ++ ++ + D Sbjct: 451 ADGEKHRPIMIHRVAFGSIERFIGILIEHYAGKFPTW---LAPVQVKILPVSDK---FAD 504 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +K+ L G V D E++G + A + P +IVG K V+++ V ++ R Sbjct: 505 YAQKVTDELKAAGIRVELDGRSEKLGYKIREAQMQKVPYMIIVGEKEVAENVVSVRKRDE 564 Query: 424 GIREDMSLEEVINYASH 440 G M L+ Sbjct: 565 GDIGSMELKTFTEKVLE 581 >gi|311279396|ref|YP_003941627.1| threonyl-tRNA synthetase [Enterobacter cloacae SCF1] gi|308748591|gb|ADO48343.1| threonyl-tRNA synthetase [Enterobacter cloacae SCF1] Length = 642 Score = 259 bits (661), Expect = 9e-67, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 142/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDE-VNACIRMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + V + +G+M ++ G W V +++ + Sbjct: 500 ENNERQVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNIT------DSQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTRKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVETGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 614 KDLGSMDVNEVIEKLLQEIRSR 635 >gi|291085451|ref|ZP_06353132.2| threonine--tRNA ligase [Citrobacter youngae ATCC 29220] gi|291071041|gb|EFE09150.1| threonine--tRNA ligase [Citrobacter youngae ATCC 29220] Length = 622 Score = 259 bits (661), Expect = 9e-67, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 142/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 212 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 269 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 270 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 328 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 329 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDE-VNACIRMVYDM 387 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 388 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 430 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 431 PFEFQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 479 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + V + +G+M ++ G W V +++ + Sbjct: 480 ENNERQVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNIT------DSQSE 533 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 534 YVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 593 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + EVI + Sbjct: 594 KDLGSLDVNEVIEKLQQEIRSR 615 >gi|210634040|ref|ZP_03297958.1| hypothetical protein COLSTE_01876 [Collinsella stercoris DSM 13279] gi|210158984|gb|EEA89955.1| hypothetical protein COLSTE_01876 [Collinsella stercoris DSM 13279] Length = 587 Score = 259 bits (661), Expect = 9e-67, Method: Composition-based stats. Identities = 90/442 (20%), Positives = 156/442 (35%), Gaps = 44/442 (9%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD ++ L M+ + G +LP G + + RE ++ G Sbjct: 185 LTMLEEAKKRDHRRIGREMDLF--MMRDEAPGFPFFLPNGMILKNTLLDYWREIHHKAGY 242 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 +E+S P + ++ LW SG +D Y M + + P + ++ S SYR Sbjct: 243 VEISTPQIMNSQLWKTSGHWDHYKDNMYSTM-IDGEEYCIKPMNCPGGVLVYASKPHSYR 301 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP +I L R EL+ G+ R R F DA+ F + + V+ + Sbjct: 302 ELPIRAGEIGLVHRHELKGALHGLFRVRCFNQDDAHLFVTPEQLTDEIV--GVVNLITSV 359 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + + + + P S E A+ G T + + Sbjct: 360 YDKFGFTYHLELSTRPEDSMGSDEDWERAEAG-----------------LKTALERLGME 402 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + E A Y D H E DSL + ++ F + + A Sbjct: 403 YVVNEGDGAFYGPKIDFHLE---DSLGRTWQCGTVQLD----FQMPQNFD----LEYVDA 451 Query: 306 DG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG K + + G++ ++ GK +W + + + + RD Sbjct: 452 DGTKKRPIMLHRVCFGSIERFIGILIEHFAGKFPVWLAPMQVKVLPV------SEKSRDY 505 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ A+L G V DD E+IG + A P +I+G K V + ++ R T Sbjct: 506 AHEVTAKLEAAGIRVVCDDRDEKIGYKIREARGTDRVPYMLILGEKEVEAGNISVRDR-T 564 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M ++E I Sbjct: 565 NETVPMGVDEFIAKVREEIDTR 586 >gi|116626335|ref|YP_828491.1| threonyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076] gi|116229497|gb|ABJ88206.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076] Length = 644 Score = 259 bits (661), Expect = 9e-67, Method: Composition-based stats. Identities = 74/443 (16%), Positives = 148/443 (33%), Gaps = 36/443 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y + + RD +L L + I + + G+ + P G + +R++ + Sbjct: 231 YLKQVEEAKKRDHRKLGKELDLFS--IQELAGPGLIFFHPKGGIIRKLLEDWMRDQYLKR 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + DLW SG + Y + M + +D P + I+ +S Sbjct: 289 GYSLVYTPHVAKLDLWKTSGHANFYAQNMFTPIELDDAEYQLKPMNCPFHILIYADRQRS 348 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ +R E G+ R R F DA+ F + ++ + Sbjct: 349 YRDLPVRLGELGTVYRYERSGTLNGLFRVRGFTQDDAHIFCM-QSQAEEEVVNCLQFAID 407 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 G + + G ++ + D + + D + Sbjct: 408 TLAAYGFEKYDAEISTWDGGASGKYD-------------GTPDQWEMAEGALRRAVDKLK 454 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 +V A Y DV KL D++ ++S + FG + Sbjct: 455 INAKVVADEAAFYGPKIDV---KLVDAIGRKWQLSTVQFDFTLPRRFG--------LEYI 503 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DGK H + G++ ++ + G +W V + + Sbjct: 504 GEDGKAHQPIMVHRALYGSIERFFGILVEHYAGAFPVWLAPVQATILPIT------DRQT 557 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + I +L + G D+ E++ + A + P ++VG + KV +++R Sbjct: 558 EYARGIKKQLEEAGIRATVDERNEKVNLKIRDAQMQKIPYMLVVGDREQESGKVAVRNRK 617 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + +L + I + Sbjct: 618 HADQGVKTLADFIAEIRALIESK 640 >gi|47096724|ref|ZP_00234309.1| threonyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] gi|254898274|ref|ZP_05258198.1| threonyl-tRNA synthetase [Listeria monocytogenes J0161] gi|254912233|ref|ZP_05262245.1| threonyl-tRNA synthetase [Listeria monocytogenes J2818] gi|254936561|ref|ZP_05268258.1| threonyl-tRNA synthetase [Listeria monocytogenes F6900] gi|47014908|gb|EAL05856.1| threonyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] gi|258609155|gb|EEW21763.1| threonyl-tRNA synthetase [Listeria monocytogenes F6900] gi|293590208|gb|EFF98542.1| threonyl-tRNA synthetase [Listeria monocytogenes J2818] Length = 640 Score = 259 bits (661), Expect = 9e-67, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 167/441 (37%), Gaps = 32/441 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 F+ + +E RD +L L T I + +G+ WLP G + I +++ R G Sbjct: 230 FIQMQKEAKERDHRKLGKELELFTNSI-EVGQGLPLWLPKGATIRRVIERYIVDKEERLG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I SY Sbjct: 289 YNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 R LP ++ + R E+ ++ + + + P+ K + ++ L ++ Sbjct: 349 RELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIIS 244 +K R D T+ + D M + + D++ Sbjct: 409 KDFDIKDYSFRLS--------------YRDPKNTEKYFDDDAMWEKAQAMLKSAMDEMEM 454 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ ++ + + +S ++ F ++ ++ G Sbjct: 455 DYFEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LSYIG 503 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H + G + + + + +P +AP ++ LI + A D Sbjct: 504 EDGEKHRPVVIHR--GVVSTMERFVAYLIEEYKGAFPTWLAPVQMELIPVNA--DAHLDY 559 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + +L + G DD E++G + A P +++G + V V ++ + Sbjct: 560 AKGVQDKLQRAGLRAEVDDRNEKLGYKIREAQTKKIPYALVLGDQEVEAGSVNVRRYGSK 619 Query: 425 IREDMSLEEVINYASHRFSNN 445 E M L+ I S Sbjct: 620 DSETMDLDAFIAQVVAEVSKY 640 >gi|313888403|ref|ZP_07822071.1| threonine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845600|gb|EFR32993.1| threonine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b] Length = 636 Score = 258 bits (660), Expect = 9e-67, Method: Composition-based stats. Identities = 78/449 (17%), Positives = 153/449 (34%), Gaps = 44/449 (9%) Query: 2 RRSK---YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 ++S+ Y + RD +L L + +H+ G + P G +N+ R Sbjct: 223 KQSQLEEYITRREEAEKRDHRKLGKELDLFS--MHEEGPGFPFFHPNGMILRNNLLNWWR 280 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIF 118 + G E+ P + + LW SG +D Y M +D P + ++ Sbjct: 281 GVLDENGYGEILTPIILNEALWHRSGHWDHYKDNM-YFTKIDDGDYAVKPMNCPGSILVY 339 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 S+ SYR+LP + + R EL G+ R R F DA+ + L + + Sbjct: 340 NSNKHSYRDLPIRLAEYGIVHRHELSGALHGLFRVRTFTQDDAHVYCLFSQVKDEVFKM- 398 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 ++ G K + P E + S Sbjct: 399 IDLADYLYSTFGFKYSI-ELSTRPDDYMGELE-----------------AWNLAEKSLKE 440 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 ++ +I E A Y D H E D++ + ++ F Sbjct: 441 ALEEKNLPYTINEGDGAFYGPKIDFHLE---DAIGRTWQCGTIQLD----FQLP----EN 489 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 T+ +G+ + +G++ ++ + +P ++P ++ +I + Sbjct: 490 FDLTYVDENGERQRPVMLHRALLGSVERFMGILI---EHFAGKFPLWLSPVQVEVIPVSD 546 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 +D E I +L G V D E++G + A + +++G K + K+ Sbjct: 547 K---FKDFAESIADKLHAAGLRVHLDGRAEKVGYKIREAQVKKINYMLVIGEKEETSGKL 603 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ R +D+ ++E I N Sbjct: 604 SVRKRNGEEVQDVDVDEFIASLKEEIKNK 632 >gi|309788453|ref|ZP_07683057.1| threonyl-tRNA synthetase [Shigella dysenteriae 1617] gi|308923835|gb|EFP69338.1| threonyl-tRNA synthetase [Shigella dysenteriae 1617] Length = 622 Score = 258 bits (660), Expect = 9e-67, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 212 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 269 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 270 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 328 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 329 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNGCIRLVYDM 387 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 388 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 430 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 431 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 479 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ D Sbjct: 480 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT------DSQSD 533 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +LS G V D E+IG + L P ++ G K V KV ++ R Sbjct: 534 YVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 593 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 594 KELGSMDVNEVIEKLQQEIRSR 615 >gi|254491441|ref|ZP_05104620.1| threonyl-tRNA synthetase [Methylophaga thiooxidans DMS010] gi|224462919|gb|EEF79189.1| threonyl-tRNA synthetase [Methylophaga thiooxydans DMS010] Length = 641 Score = 258 bits (660), Expect = 9e-67, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 139/444 (31%), Gaps = 38/444 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y + + RD + L L + + + G+ W G + V IR+ Sbjct: 228 LKQYLHRLEEAEKRDHRKIAKNLDLF--HLQEEAAGMIFWHDNGWQIYRVVENYIRDVLR 285 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + LW +SG +D + +M+ ++ P + IF + Sbjct: 286 DNDYQEVRTPQVVDRTLWEKSGHWDKF-GDMIFSTHSENRDYAVKPMNCPCHIQIFNQGL 344 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F + Sbjct: 345 KSYRDLPLRMAEFGSCHRNEPSGTLHGLMRLRGFTQDDAHIFCTEDQIQSE-VATFIELL 403 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G I ++ + P S E A+ + D P E Sbjct: 404 HEVYADFGFNEIIVKLSTRPENRVGSDEVWDKAEKALEDALNAADLDWELQPGE------ 457 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 A Y + L D L + ++ + Sbjct: 458 -----------GAFYGPKIEF---SLKDCLSRVWQCGTIQVDFSMPGRLDAHF------- 496 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + K V + +G++ ++ + G W + + Sbjct: 497 VADDNSKQVPVMLHRAILGSLERFIGILIEEYAGAFPTWLAPKQVMVMGI------SDKQ 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + +K+ L K G V D E+IG + L P ++VG + D+ V ++ R Sbjct: 551 SEYVQKVAKDLQKQGFRVDTDLRNEKIGFKIREHTLRRVPYLIVVGEREAQDNAVAVRTR 610 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 M LE+ + + Sbjct: 611 KGEDLGAMQLEDFVGLLEKDVARR 634 >gi|17546296|ref|NP_519698.1| threonyl-tRNA synthetase [Ralstonia solanacearum GMI1000] gi|22654118|sp|Q8XZ29|SYT_RALSO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|17428593|emb|CAD15279.1| probable threonyl-trna synthetase (threonine--trna ligase) protein [Ralstonia solanacearum GMI1000] Length = 635 Score = 258 bits (660), Expect = 9e-67, Method: Composition-based stats. Identities = 79/444 (17%), Positives = 149/444 (33%), Gaps = 41/444 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD L L + + + G+ W P G + V +R Sbjct: 229 EAYLHMLEEAEKRDHRKLGKLLDLF--HLQEEAPGMVFWHPKGWQIWQAVEQYMRGRLAG 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW SG +++Y + M + + + P + IF ++ Sbjct: 287 AGYSEVRTPQVMDRGLWERSGHWENYKENMF-VTESEKREYAIKPMNCPGHVQIFNHGLR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F+ DA+ F T Sbjct: 346 SYRDLPLRLAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFC-TEGQIMAEAKDFNDLAF 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 I+ G +++ ++ P + E A+ G + +P E Sbjct: 405 SIYEDFGFENVAVKLALRPDKRAGTDEIWDHAEEGLRTALRACGVEWEELPGE------- 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + H + D++ + + +++ G A + Sbjct: 458 ----------GAFYGPKVEYH---IKDAIGRSWQCGTLQLDLVLPERLG--------AEY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D + +G+ ++ +H G +W + I + Sbjct: 497 VAEDNSRKRPVMLHRAILGSFERFLGILLENHAGALPLW------LAPEQVVIMSIADAH 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + E + L K G D E+I + L P V+VG K ++V ++ R Sbjct: 551 AEYAESVAQSLQKQGFRASADLRNEKITYKIREHSLQKVPYLVVVGDKERDGNQVAVRAR 610 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 M + + + F+N Sbjct: 611 GNVDLGSMPVSTFVERLQNDFANK 634 >gi|283785057|ref|YP_003364922.1| threonyl-tRNA synthetase [Citrobacter rodentium ICC168] gi|282948511|emb|CBG88100.1| threonyl-tRNA synthetase [Citrobacter rodentium ICC168] Length = 642 Score = 258 bits (660), Expect = 9e-67, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 142/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDE-VNACIRMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ + Sbjct: 500 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNIT------DSQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + EVI + Sbjct: 614 KDLGSLDVNEVIEKLQQEIRSR 635 >gi|291617247|ref|YP_003519989.1| ThrS [Pantoea ananatis LMG 20103] gi|291152277|gb|ADD76861.1| ThrS [Pantoea ananatis LMG 20103] Length = 642 Score = 258 bits (660), Expect = 9e-67, Method: Composition-based stats. Identities = 72/442 (16%), Positives = 137/442 (30%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQLRTE-VNSCIRMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKILVKLSTRPEKRIGSDE-----------------TWDRAEEDLAAALNENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F + AT+ G Sbjct: 451 EFEYQPGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLP----KRLDATYVG 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + +G+M ++ G W + +++ + Sbjct: 500 ENNDRQTPVMIHRAILGSMERFIGILTEEFAGFFPSWLAPMQAVVMNIT------DGQAE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E + +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVETLTRKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M ++ + + Sbjct: 614 KDLGSMDVDVFVEKLQQEIRSR 635 >gi|225387532|ref|ZP_03757296.1| hypothetical protein CLOSTASPAR_01285 [Clostridium asparagiforme DSM 15981] gi|225046368|gb|EEG56614.1| hypothetical protein CLOSTASPAR_01285 [Clostridium asparagiforme DSM 15981] Length = 584 Score = 258 bits (660), Expect = 9e-67, Method: Composition-based stats. Identities = 83/442 (18%), Positives = 143/442 (32%), Gaps = 39/442 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L M G +LP G + + RE R Sbjct: 179 QYLTMMEEAKKRDHRKLGKELGLF--MFADEGPGFPFFLPKGMTLKNTLIDYWREIHLRE 236 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+S P + S LW SG +D Y M +++ P + ++++ S Sbjct: 237 GYQEVSTPIILSRKLWENSGHWDHYKDNMYT-TVIDEEDFAVKPMNCPGGMLVYKNTPHS 295 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP ++ L R E + G+MR R F DA+ F + + Sbjct: 296 YRELPLRVGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMRDDQIEDEIKGVTRLI--- 352 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + E+ V T S + + +D+ Sbjct: 353 ----------------NEVYSQFGFEYFVELSTRPEDSMGSDEDWEMATNGLRKALEDMG 396 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H L DSL + ++ F ++ L +A Sbjct: 397 LDYIVNEGDGAFYGPKIDFH---LRDSLGRTWQCGTIQLD----FQMPQRFDLEYTAE-- 447 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 K + + G++ ++ GK +W V I + + D Sbjct: 448 -DGNKKRPIMIHRVCFGSIERFIGILIEHFAGKFPVWLAPVQVKVIPV------SEKSMD 500 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +Y +L G D E++G + A L P +++G K ++ + ++ R Sbjct: 501 YATGVYEKLKAAGIRTELDHKDEKVGYKIRQAQLEKVPFMLVLGEKEAAEGAITVRSRDK 560 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G LE I Sbjct: 561 GDLGAAQLEAFIGDVKRMIETK 582 >gi|15597940|ref|NP_251434.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa PAO1] gi|116050734|ref|YP_790445.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14] gi|218891076|ref|YP_002439942.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa LESB58] gi|254241197|ref|ZP_04934519.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa 2192] gi|313107813|ref|ZP_07793987.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa 39016] gi|22654141|sp|Q9I099|SYT_PSEAE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|122259859|sp|Q02NP1|SYT_PSEAB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226701406|sp|B7V188|SYT_PSEA8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|9948822|gb|AAG06132.1|AE004702_9 threonyl-tRNA synthetase [Pseudomonas aeruginosa PAO1] gi|115585955|gb|ABJ11970.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14] gi|126194575|gb|EAZ58638.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa 2192] gi|218771301|emb|CAW27066.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa LESB58] gi|310880489|gb|EFQ39083.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa 39016] Length = 640 Score = 258 bits (660), Expect = 9e-67, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + + G+ W P G + +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRRIGKQLDLF--HLQEEAPGMVFWHPNGWSVYQVLEQYMRKVQRDHG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + P + IF +KSY Sbjct: 289 YVEVRTPQVVDRILWERSGHWSNYAENMFT-TSSESRDYAVKPMNCPCHVQIFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + K + L++ Sbjct: 348 RDLPLRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQVKKEA-ADFIKLTLQV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I M+ + P S E D + ++ Sbjct: 407 YRDFGFTDIAMKLSTRPAKRVGSDE-----------------LWDRAEGALADALNESGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L N + + + A++ Sbjct: 450 AWEYQPGEGAFYGPKIEF---TLKDCLGRNWQCGTLQYDPNLP--------ERLDASYIA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ + +P +AP + ++NI D Sbjct: 499 EDNNRKRPVMLHRAILGSFERFIGMLI---EHYAGAFPAWLAPTQAVVMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L + G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FAAEVVRILGESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVESKAVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + + S Sbjct: 613 EDLGSMPVTQFAELLAQAVSRR 634 >gi|91201672|emb|CAJ74732.1| strongly similar to threonyl-tRNA synthetase [Candidatus Kuenenia stuttgartiensis] Length = 640 Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats. Identities = 83/445 (18%), Positives = 154/445 (34%), Gaps = 35/445 (7%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD L L + G+ W P G + + R+E R Sbjct: 228 KKYLKMLEEAEKRDHRKIGKDLDLFSFH-EDGGAGLAFWHPKGARMRSIIEDFWRQEHFR 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + +LW SG +D Y + M D + I P + I+++ + Sbjct: 287 RGYEILYSPHIAKINLWKTSGHWDFYRESMYSPIDVDGHEYILKPMNCPFAVLIYKTKLH 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + ++ +R E G++R R F DA+ F TP+ + ++ Sbjct: 347 SYRDLPLRWGELGTVYRYERSGVLHGLLRVRGFTQDDAHIFC-TPDQLEQEILEVIKLAQ 405 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + G + + G E + D D + + Sbjct: 406 FMLSSFGFNEYEIELS---VRGKGEKE----------KYIGRDDVWDHAEDALKIALEKT 452 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + +E Y D+ K+ D++ + ++ F ++ + Sbjct: 453 GLHYTRMEGEAKFYGPAIDI---KVKDAIGRGWQGPTIQVD----FNLPERFD----VNY 501 Query: 303 KGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G+DG H V + +GAM + G +W + I + Sbjct: 502 VGSDGYHHRVVMIHRTVMGAMERFIGCLIEHFAGDFPLW------IAPIQMRILSITDAQ 555 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D +K+ L V D +IG + L P +IVG+K + + V ++ R Sbjct: 556 IDYAKKLQTELLLKNFRVECDIGNNKIGYKIREGTLQKIPYLLIVGNKEMEEGLVAVRSR 615 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 G + + + I+ + Sbjct: 616 KNGDEGALPVRDFISKVEEEVRGKK 640 >gi|300818358|ref|ZP_07098568.1| threonyl-tRNA synthetase [Escherichia coli MS 107-1] gi|300821407|ref|ZP_07101554.1| threonyl-tRNA synthetase [Escherichia coli MS 119-7] gi|300525910|gb|EFK46979.1| threonyl-tRNA synthetase [Escherichia coli MS 119-7] gi|300528998|gb|EFK50060.1| threonyl-tRNA synthetase [Escherichia coli MS 107-1] gi|323158484|gb|EFZ44500.1| threonyl-tRNA synthetase [Escherichia coli E128010] gi|323175213|gb|EFZ60827.1| threonyl-tRNA synthetase [Escherichia coli LT-68] gi|323180497|gb|EFZ66042.1| threonyl-tRNA synthetase [Escherichia coli 1180] gi|323186265|gb|EFZ71617.1| threonyl-tRNA synthetase [Escherichia coli 1357] Length = 622 Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 212 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 269 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 270 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 328 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 329 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNGCIRLVYDM 387 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 388 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 430 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 431 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 479 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ + Sbjct: 480 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT------DSQSE 533 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +LS G V D E+IG + L P ++ G K V KV ++ R Sbjct: 534 YVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 593 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 594 KDLGSMDVNEVIEKLQQEIRSR 615 >gi|302391179|ref|YP_003826999.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501] gi|302203256|gb|ADL11934.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501] Length = 639 Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats. Identities = 87/439 (19%), Positives = 152/439 (34%), Gaps = 41/439 (9%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + + RD KL L + +H KG + P G + + +EE + G E Sbjct: 239 RLEEAKKRDHRKLGQKLDLFS--LHDEGKGFPFFHPKGMVVRNELIDFWKEEHRQAGYKE 296 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 + P + + DLW +SG +D Y ++M + + + P + +++ ++SYR+L Sbjct: 297 IKTPVILNQDLWKQSGHWDHYKEDM-YFTEIDKEPHAVKPMNCPGGILVYKDKMRSYRDL 355 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P ++ L R E G+MR R F DA+ F L P + + RI+ Sbjct: 356 PIRMGELGLVHRHERSGTLHGLMRVRNFTQDDAHIFCL-PSQIEEELTGVIKLVDRIYAP 414 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 G V T + S + D + + Sbjct: 415 FGFNYR------------------VELSTKPDKAMGSDELWDKATDALREAIEANDLDYK 456 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 + E A Y D H E R + G + + T+ G DG Sbjct: 457 VNEGDGAFYGPKIDFHLED----------CLGRTWQCGTV-QLDFQMPERFDLTYVGQDG 505 Query: 308 KDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 ++H + G++ ++ + G W +AP + +I + D Sbjct: 506 EEHRPVMIHRAIFGSLERFMGILIEHYAGAFPTW---LAPIQTEVIPVTDDH---LDYAY 559 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 ++ L+ G V D E++G + A + P +IVG + D V ++ R G Sbjct: 560 QVKEELADAGVRVEVDARQEKVGYKIREAQVQQVPYMLIVGDDEIEDKTVSVRDRREGDL 619 Query: 427 EDMSLEEVINYASHRFSNN 445 L E N Sbjct: 620 GAKDLAEFKAEIVKEIENR 638 >gi|161503559|ref|YP_001570671.1| threonyl-tRNA synthetase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864906|gb|ABX21529.1| hypothetical protein SARI_01637 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 622 Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 142/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 212 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 269 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 270 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 328 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 329 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDE-VNACIRMVYDM 387 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 388 YSTFGFEKIVVKLSTRPDKRIGSDE-----------------MWDRAEADLAVALEENNI 430 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 431 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 479 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ + Sbjct: 480 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNIT------DSQSE 533 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 534 YVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 593 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + EVI + Sbjct: 594 KDLGSLDVNEVIEKLQQEIRSR 615 >gi|188533977|ref|YP_001907774.1| threonyl-tRNA synthetase [Erwinia tasmaniensis Et1/99] gi|238689736|sp|B2VEM1|SYT_ERWT9 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|188029019|emb|CAO96887.1| Threonyl-tRNA synthetase [Erwinia tasmaniensis Et1/99] Length = 642 Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 140/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLLRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYE 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y + M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYKEAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDE-VNSCIKMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S D D + Sbjct: 408 YSTFGFEKIVVKLSTRPEKR-----------------IGSDDLWDRSEADLAAALKENGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ F + S A++ G Sbjct: 451 PFEYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+M ++ + G W V +++ + Sbjct: 500 ESNERQVPVMIHRAILGSMERFIGILTEEYAGFFPTWLAPVQVVVMNIT------DGQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVAELTRKLQNAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + EVI + Sbjct: 614 KDLGSIDVNEVIAKLQDEIRSR 635 >gi|326623540|gb|EGE29885.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 622 Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 142/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 212 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 269 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 270 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 328 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 329 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDE-VNACIRMVYDM 387 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 388 YSTFGFEKIVVKLSTRPDKRIGSDE-----------------MWDRAEADLAVALEENNI 430 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 431 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 479 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ + Sbjct: 480 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNIT------DSQSE 533 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 534 YVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 593 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + +VI + Sbjct: 594 KDLGSLDVNDVIEKLQQEIRSR 615 >gi|307545104|ref|YP_003897583.1| threonyl-tRNA synthetase [Halomonas elongata DSM 2581] gi|307217128|emb|CBV42398.1| threonyl-tRNA synthetase [Halomonas elongata DSM 2581] Length = 632 Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats. Identities = 82/443 (18%), Positives = 147/443 (33%), Gaps = 41/443 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E RD + KL L + + + G+ W P G V +R+ Sbjct: 226 KQLKAYLKRLEEAEKRDHRKLARKLDLF--HMQEEAPGMVFWHPRGWTLWQVVEQYMRQV 283 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E+ P + LW +SG +D+Y M + + P + +F S Sbjct: 284 YKDGGYQEIRCPQVMDVSLWKKSGHWDNYADGMF-FTESEKREYALKPMNCPGHVQVFNS 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 ++SYR LP + + R+E G+MR R F D + F + + Sbjct: 343 GLRSYRELPVRYGEFGGCHRNEPSGALHGIMRVRAFTQDDGHVFCTEEQIEPEVTSFHRQ 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L+++ G + I ++ P D + Sbjct: 403 -ALQVYRDFGFEDIAVKIALRPEKR-----------------LGDDAVWDRAEEALRGAL 444 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + A Y + H + D L +V ++ G Sbjct: 445 RTCDVDWDELPGEGAFYGPKIEYH---MKDCLGREWQVGTMQVDFMMPVRLG-------- 493 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + DG+ + +G+M ++ + G +W +++ Sbjct: 494 AQYVAEDGERRSPVMLHRAIVGSMERFIGILIEHYAGAMPLWLAPQQAVVLTIT------ 547 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 RD + RL K G V D E+IG + L P ++VG K V V + Sbjct: 548 DAQRDYATYLEQRLQKKGLRVKADLRNEKIGFKIREHTLQKVPYLLVVGDKEVEADSVAV 607 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + R M+++ I+ Sbjct: 608 RSRSGEDLGTMTVDAFIDRIQAE 630 >gi|83647272|ref|YP_435707.1| threonyl-tRNA synthetase [Hahella chejuensis KCTC 2396] gi|123753567|sp|Q2SDJ2|SYT_HAHCH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|83635315|gb|ABC31282.1| threonyl-tRNA synthetase [Hahella chejuensis KCTC 2396] Length = 637 Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 147/441 (33%), Gaps = 38/441 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD KL L + + + G+ W G + +R++ + Sbjct: 231 YLHRIEEAEKRDHRKIGKKLGLF--HMQEEAPGMVFWHSDGWTLYQVIEQYMRKQLRKHD 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG ++ + +M D+ P + +F ++SY Sbjct: 289 YKEIKTPQVVERTLWEKSGHWEKFRDDMFT-TQSEDRDFAIKPMNCPCHVQVFNQGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F T E + K + Sbjct: 348 RDLPLRLAEFGSCHRNEASGALHGLMRVRGFTQDDAHIFC-TEEQIQEEVGKFIDFLHEV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I + + P S E ++ +K +P E Sbjct: 407 YADFGFSEIIYKLSTRPEKRVGSDEIWDKSEKALADALDAKGLPWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ G +Y Sbjct: 458 --------GAFYGPKVEF---SLKDCLGRLWQCGTVQVDFSMPGRLGAQY-------VSD 499 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + V + +G+ ++ ++G W +AP +++++NI D Sbjct: 500 EQVRKTPVMLHRAILGSFERFIGILIEHYEGAFPSW---LAPTQVAILNITDK---QADY 553 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 C+KI L+ G V D E+I + L P +VG K V + I+ R Sbjct: 554 CKKIGEILNDKGFRVRLDLRNEKINYKIREHTLNRVPFLAVVGDKEVETQCLAIRTRQGE 613 Query: 425 IREDMSLEEVINYASHRFSNN 445 MS+ + + Sbjct: 614 DLGVMSISAFEELLQNEEAKR 634 >gi|213650865|ref|ZP_03380918.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 622 Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 142/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 212 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 269 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 270 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 328 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 329 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDE-VNACIRMVYDM 387 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 388 YSTFGFEKIVVKLSTRPDKRIGSDE-----------------MWDRAEADLAVALEENNI 430 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 431 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 479 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ + Sbjct: 480 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNIT------DSQSE 533 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 534 YVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 593 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + +VI + Sbjct: 594 KDLGSLDVNDVIEKLQQEIRSR 615 >gi|167034477|ref|YP_001669708.1| threonyl-tRNA synthetase [Pseudomonas putida GB-1] gi|189083619|sp|B0KKR8|SYT_PSEPG RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166860965|gb|ABY99372.1| threonyl-tRNA synthetase [Pseudomonas putida GB-1] Length = 640 Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 144/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + + G+ W G + +R Q G Sbjct: 231 YIQRIEEAEKRDHRKIGKQLDLF--HLQEEAPGMVFWHANGWTVYQVLEQYMRGVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW SG + +Y + M + P + +F +KSY Sbjct: 289 YQEIKTPQVVDRILWERSGHWSNYAENMFT-TSSESRDYAVKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + K + L + Sbjct: 348 RDLPLRLAEFGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEEQVKKEA-ADFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I M+ + P S E A+T + ++ Sbjct: 407 YKDFGFSDIAMKLSTRPAKRVGSEELWDRAET-----------------ALADALNESGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L N + + + A++ Sbjct: 450 EWEYQPGEGAFYGPKIEF---TLRDCLGRNWQCGTLQYDPNLP--------ERLDASYIA 498 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D V + +G+ ++ + ++P +AP + ++NI D Sbjct: 499 EDNSRVRPVMLHRAILGSFERFIGMLI---EHYAGVFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L+ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FALEVEKSLNGSGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVETQTVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + + S Sbjct: 613 ADLGSMPVAQFAELLTQAVSRR 634 >gi|71066652|ref|YP_265379.1| threonyl-tRNA synthetase [Psychrobacter arcticus 273-4] gi|123775558|sp|Q4FPW3|SYT_PSYA2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|71039637|gb|AAZ19945.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Psychrobacter arcticus 273-4] Length = 644 Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats. Identities = 81/445 (18%), Positives = 141/445 (31%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 Y I + RD L L + + + G+ W G + +R+ Q Sbjct: 228 LKTYIQRIEEAEKRDHRKIGKALNLF--HMQEQAPGMVFWHANGWTIYQVLEQYMRKVQQ 285 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P + LW SG + +Y M + P + +F + Sbjct: 286 DNGYEEIKTPQIVDRSLWERSGHWGNYATNMFT-TSSEKRDYAVKPMNCPCHVQVFNQGL 344 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + Sbjct: 345 KSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TQSQIQQEVADFIKLT 403 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L ++ G +I M+ + P S E DF + D+ Sbjct: 404 LAVYEDFGFNNIIMKLSTRPEKRVGSDE-----------------SWDFAEKALADALDN 446 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + A Y + L DSL + ++ + A Sbjct: 447 SGLDWAYLPGEGAFYGPKIEF---SLKDSLGRVWQCGTIQVDPNMP--------ERLDAE 495 Query: 302 FKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 F + + + +G+ ++ ++ G +W +++ Sbjct: 496 FVNEQNEREVPIMLHRAILGSFERFIGILIENYAGWMPVWLAPQQVVVMNIT------DK 549 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 +ACE + L K G D E+IG + L P +++G K V V ++ Sbjct: 550 QAEACENVVNELKKSGLRAISDLRNEKIGFKIREKTLERIPYMLVLGDKEVESGSVNVRT 609 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R MS+ E I + Sbjct: 610 REGENLGVMSVAEFIILVETAVAEK 634 >gi|329895719|ref|ZP_08271123.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC3088] gi|328922195|gb|EGG29550.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC3088] Length = 641 Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats. Identities = 79/446 (17%), Positives = 135/446 (30%), Gaps = 42/446 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y I + RD +L L + + G+ W P G + +R Q Sbjct: 228 LKQYLNRIAEAEKRDHRRIGKQLDLF--HTQEEAPGMVFWHPKGWTVYQVIEQYMRNRQR 285 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G E+ P + LW +SG D +G +M L D+ P + +F + Sbjct: 286 QEGYKEIKTPQVVDMTLWHKSGHADKFGDDMFMLK-AEDREFAVKPMNCPCHVQVFNQGL 344 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F + ++ Sbjct: 345 KSYRDLPLRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQPE-VSRFIDFL 403 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G + R + P S E A+ + + +P E Sbjct: 404 HGVYEDFGFNEVIYRLSTRPEKRVGSEEDWDRAEKALADALDAHNLPWELLPGE------ 457 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 A Y + L D + ++ ++ A Sbjct: 458 -----------GAFYGPKIEF---SLKDCIGRVWQLGTIQVDFSMPGRLD--------AQ 495 Query: 302 FKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + DG M I R + +IE Sbjct: 496 YVAEDGARKTPVMLHRAILGSFERFIGILIEHFEGRFPTWLAPEQVAVMNIT-------D 548 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + + + L+ G D E+IG + L P ++VG K V V ++ Sbjct: 549 KQGEFTQNVVDYLNNSGFRAIADLRNEKIGFKIRERTLAKIPYLLVVGDKEVETQSVAVR 608 Query: 420 HRLTGIREDMSLEEVINYASHRFSNN 445 R M+L + Y + Sbjct: 609 TRDGKDLGTMTLADFAEYLRQDVGSR 634 >gi|301327449|ref|ZP_07220684.1| threonyl-tRNA synthetase [Escherichia coli MS 78-1] gi|309793489|ref|ZP_07687916.1| threonyl-tRNA synthetase [Escherichia coli MS 145-7] gi|312969746|ref|ZP_07783929.1| threonyl-tRNA synthetase [Escherichia coli 1827-70] gi|300845961|gb|EFK73721.1| threonyl-tRNA synthetase [Escherichia coli MS 78-1] gi|308123076|gb|EFO60338.1| threonyl-tRNA synthetase [Escherichia coli MS 145-7] gi|310338031|gb|EFQ03120.1| threonyl-tRNA synthetase [Escherichia coli 1827-70] Length = 622 Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 212 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 269 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 270 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 328 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 329 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNGCIRLVYDM 387 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 388 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 430 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 431 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 479 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ D Sbjct: 480 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT------DSQSD 533 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +LS G V D E+IG + L P ++ G K V KV ++ R Sbjct: 534 YVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 593 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 594 KDLGSMDVNEVIEKLQQEIRSR 615 >gi|197118372|ref|YP_002138799.1| threonyl-tRNA synthetase [Geobacter bemidjiensis Bem] gi|238690868|sp|B5EBX9|SYT_GEOBB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|197087732|gb|ACH39003.1| threonyl-tRNA synthetase [Geobacter bemidjiensis Bem] Length = 636 Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats. Identities = 85/443 (19%), Positives = 154/443 (34%), Gaps = 40/443 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + R+E + G Sbjct: 232 YLARIEEAKKRDHRKLGRELDLFS-FNDEVGAGLVIWHPKGAMLRTILEDFERKEHLKRG 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +LW SG Y++Y + M ++++ P + I+RS ++SY Sbjct: 291 YDIVLGPQILKTELWQRSGHYENYRENM-YFTTVDEQSYGVKPMNCLAHMMIYRSQLRSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++++ R E G++R R F DA+ TPE + + Sbjct: 350 RDLPLRYFELGTVHRHERAGVLHGLLRVRGFTQDDAHILC-TPEQLDAEIKGVIQFVTEV 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G EF + T + S D + + D Sbjct: 409 MGIFG------------------FEFEMELSTRPEKSIGSDDAWELATNALLNALKDSGR 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ KL D+L + + + F ++ T+ Sbjct: 451 PYEINEGDGAFYGPKIDI---KLRDALDRRWQCATIQCD----FTLPERFD----LTYVD 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ + +GA+ V+ G W V +++ Sbjct: 500 ADGEKKRPVMVHRVILGAIERFIGVLIEHFAGNFPTWLAPVQATIVTVT------DNQIP 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + +L G V D E++G + A L P ++VG K V + + R Sbjct: 554 YAQAAFDKLRAAGIRVQKDFRNEKLGFKIREAQLQKIPYMLVVGDKEVESGMLAPRFRDG 613 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 E M+ E+ +++ + + Sbjct: 614 KNLESMTPEQFVSFIESEVKSYK 636 >gi|229167201|ref|ZP_04294942.1| Threonyl-tRNA synthetase [Bacillus cereus AH621] gi|228616239|gb|EEK73323.1| Threonyl-tRNA synthetase [Bacillus cereus AH621] Length = 639 Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats. Identities = 75/447 (16%), Positives = 156/447 (34%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + +Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 231 KLEEYLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQ 288 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N E+ P + + +LW +SG + Y M ++ + K+ P + +F++ Sbjct: 289 NEYNYQEVRTPFMMNQELWEKSGHWGHYKDNM-YFSEVDHKSFALKPMNCPGHMLMFKNK 347 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP + R E G++R R F DA+ +TPE + + Sbjct: 348 LHSYRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVLAQ 406 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++ G E+ V T + + Sbjct: 407 IDYVYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAELALENVLQ 448 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + E A Y D H + D+L + + ++ F K+ Sbjct: 449 SLNYKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTVQLD----FQMPEKFD----L 497 Query: 301 TFKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + + + + +G++ A++ G +W + + I + Sbjct: 498 NYIDENNEKRRPVVIHRAVLGSLDRFLAILIEHFGGAFPLWVA-----PVQVKVIPVSNA 552 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 V ++ +L++ G V D E++G + A + P +++G K + V ++ Sbjct: 553 VHVQYANEVADKLAQAGIRVERDIRDEKLGYKIREAQMQKVPYVLVIGDKEMESEAVNVR 612 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 E + L+ + N + Sbjct: 613 KYGEEKSEVIELDAFVESMKEEIKNRK 639 >gi|227885859|ref|ZP_04003664.1| threonine--tRNA ligase [Escherichia coli 83972] gi|300898493|ref|ZP_07116830.1| threonyl-tRNA synthetase [Escherichia coli MS 198-1] gi|300917719|ref|ZP_07134368.1| threonyl-tRNA synthetase [Escherichia coli MS 115-1] gi|300930805|ref|ZP_07146177.1| threonyl-tRNA synthetase [Escherichia coli MS 187-1] gi|300951319|ref|ZP_07165163.1| threonyl-tRNA synthetase [Escherichia coli MS 116-1] gi|300958608|ref|ZP_07170733.1| threonyl-tRNA synthetase [Escherichia coli MS 175-1] gi|301050944|ref|ZP_07197793.1| threonyl-tRNA synthetase [Escherichia coli MS 185-1] gi|301647910|ref|ZP_07247687.1| threonyl-tRNA synthetase [Escherichia coli MS 146-1] gi|227837432|gb|EEJ47898.1| threonine--tRNA ligase [Escherichia coli 83972] gi|300297398|gb|EFJ53783.1| threonyl-tRNA synthetase [Escherichia coli MS 185-1] gi|300314733|gb|EFJ64517.1| threonyl-tRNA synthetase [Escherichia coli MS 175-1] gi|300357845|gb|EFJ73715.1| threonyl-tRNA synthetase [Escherichia coli MS 198-1] gi|300415120|gb|EFJ98430.1| threonyl-tRNA synthetase [Escherichia coli MS 115-1] gi|300449416|gb|EFK13036.1| threonyl-tRNA synthetase [Escherichia coli MS 116-1] gi|300461363|gb|EFK24856.1| threonyl-tRNA synthetase [Escherichia coli MS 187-1] gi|301073967|gb|EFK88773.1| threonyl-tRNA synthetase [Escherichia coli MS 146-1] gi|312946320|gb|ADR27147.1| threonyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C] gi|313649261|gb|EFS13695.1| threonyl-tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|315618916|gb|EFU99499.1| threonyl-tRNA synthetase [Escherichia coli 3431] gi|323169354|gb|EFZ55030.1| threonyl-tRNA synthetase [Shigella sonnei 53G] gi|323186901|gb|EFZ72219.1| threonyl-tRNA synthetase [Escherichia coli RN587/1] gi|324007092|gb|EGB76311.1| threonyl-tRNA synthetase [Escherichia coli MS 57-2] gi|332090644|gb|EGI95739.1| threonyl-tRNA synthetase [Shigella boydii 5216-82] gi|332093917|gb|EGI98970.1| threonyl-tRNA synthetase [Shigella dysenteriae 155-74] gi|332759227|gb|EGJ89536.1| threonyl-tRNA synthetase [Shigella flexneri K-671] gi|332762542|gb|EGJ92807.1| threonyl-tRNA synthetase [Shigella flexneri 4343-70] gi|332767218|gb|EGJ97413.1| threonyl-tRNA synthetase [Shigella flexneri 2930-71] gi|333018198|gb|EGK37500.1| threonyl-tRNA synthetase [Shigella flexneri K-304] Length = 622 Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 212 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 269 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 270 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 328 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 329 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNGCIRLVYDM 387 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 388 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 430 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 431 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 479 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ + Sbjct: 480 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT------DSQSE 533 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +LS G V D E+IG + L P ++ G K V KV ++ R Sbjct: 534 YVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 593 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 594 KDLGSMDVNEVIEKLQQEIRSR 615 >gi|152988735|ref|YP_001347870.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa PA7] gi|166225481|sp|A6V485|SYT_PSEA7 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|150963893|gb|ABR85918.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa PA7] Length = 640 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + + G+ W P G + +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRRIGKQLDLF--HLQEEAPGMVFWHPNGWSVYQVLEQYMRKVQRDHG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + P + IF +KSY Sbjct: 289 YVEVRTPQVVDRILWERSGHWSNYAENMFT-TASESRDYAVKPMNCPCHVQIFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + K + L++ Sbjct: 348 RDLPLRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQVKKEA-ADFIKLTLQV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I M+ + P S E D + ++ Sbjct: 407 YRDFGFTDIAMKLSTRPAKRVGSDE-----------------LWDRAEGALADALNESGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L N + + + A++ Sbjct: 450 AWEYQPGEGAFYGPKIEF---TLKDCLGRNWQCGTLQYDPNLP--------ERLDASYIA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ + +P +AP + ++NI D Sbjct: 499 EDNNRKRPVMLHRAILGSFERFIGMLI---EHYAGAFPAWLAPTQAVVMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L + G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FAAEVVRILGESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVESKAVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + + S Sbjct: 613 EDLGSMPVTQFAELLAQAVSRR 634 >gi|300904575|ref|ZP_07122412.1| threonyl-tRNA synthetase [Escherichia coli MS 84-1] gi|300403488|gb|EFJ87026.1| threonyl-tRNA synthetase [Escherichia coli MS 84-1] gi|315257476|gb|EFU37444.1| threonyl-tRNA synthetase [Escherichia coli MS 85-1] Length = 622 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 212 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 269 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 270 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 328 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 329 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNGCIRLVYDM 387 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 388 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 430 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 431 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 479 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ D Sbjct: 480 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT------DSQSD 533 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +LS G V D E+IG + L P ++ G K V KV ++ R Sbjct: 534 YVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 593 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 594 KDLGSMDVNEVIEKLQQEIRSR 615 >gi|50121350|ref|YP_050517.1| threonyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043] gi|73919790|sp|Q6D4G8|SYT_ERWCT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|49611876|emb|CAG75325.1| threonyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043] Length = 642 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 78/445 (17%), Positives = 145/445 (32%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 + Y + + + RD +L L + + + G+ W G + A +R + Sbjct: 229 LASYLQRLEEASKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEAFVRMKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + +W ++G +D+Y + M ++ P + IF + Sbjct: 287 SYQYQEVKGPFMMDRVMWEKTGHWDNYKEAMFT-TSSENREYCIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F + N Sbjct: 346 KSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRDE-VNSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G + I ++ + P S E D + Sbjct: 405 YDMYSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAAALTE 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y + L D L + ++ F + S A+ Sbjct: 448 NNIEFAYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGRLS----AS 496 Query: 302 FKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G + V + +G+M ++ G W V I++ Sbjct: 497 YVGESNERQVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIINIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ +L + G V D E+IG + L P ++ G K V KV ++ Sbjct: 551 QSDYVNELTQKLQEAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R + + EVI+ + Sbjct: 611 RRGKDLGSLDVSEVISKLQQEIRSR 635 >gi|329115958|ref|ZP_08244675.1| threonine--tRNA ligase [Streptococcus parauberis NCFD 2020] gi|326906363|gb|EGE53277.1| threonine--tRNA ligase [Streptococcus parauberis NCFD 2020] Length = 648 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 77/448 (17%), Positives = 158/448 (35%), Gaps = 34/448 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L L+E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KAYLTRLEEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRTLERYITDKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P + S +L+ SG ++ Y ++M D D + + P + ++++H Sbjct: 287 ASGYQHVYTPPMASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKNH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP ++ + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + + + + + D+ Sbjct: 407 IDVYEDFNLTDYRFRLS-------------YRDPKDTHKYYDNDEMWENAQAMLKAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQV----TVIPISNEAH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ L G DD E++ + + P Q+IVG K + D V ++ Sbjct: 559 IDYAWEVAKTLRDRGIRADVDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKAVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRF-SNNRPV 448 + S+EE ++ +RPV Sbjct: 619 GSKATHTESIEEFVDNILADIARKSRPV 646 >gi|56475898|ref|YP_157487.1| threonyl-tRNA synthetase [Aromatoleum aromaticum EbN1] gi|73919766|sp|Q5P7X5|SYT_AZOSE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56311941|emb|CAI06586.1| threonyl-tRNA synthetase [Aromatoleum aromaticum EbN1] Length = 638 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 143/442 (32%), Gaps = 41/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD L L I + + G+ W G V +R G Sbjct: 231 YLHMLEEAEKRDHRKLGRLLDLF--HIQEEAPGMVFWHAKGWTLWQQVEQYMRRTILDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D Y E++ + P + IF +KSY Sbjct: 289 YQEVKTPQIVDRSLWEKSGHWDMY-SELMFTTQSEKRDYAVKPMNCPCHIQIFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + ++ Sbjct: 348 RDLPLRMAEFGSCHRNEPSGALHGIMRVRNFVQDDAHIFCADEQVQTEA-AAFIELLQKV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ + P + D D + D Sbjct: 407 YADFGFTEILIKLSTRPDKR-----------------VGTDDQWDAAEAALAAALDAQGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ G A + Sbjct: 450 AYDLQPGEGAFYGPKIEF---SLKDCLNRVWQCGTLQLDFNLPVRLG--------AEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D HY + +G++ ++ + G +W V +++ + D Sbjct: 499 EDNAKHYPVMLHRAILGSLERFIGILIEHYAGALPLWLAPVHAVVLNI------SEGQTD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ RL + G V D E+I + + P Q+++G K + V ++ R Sbjct: 553 YATEVARRLKQAGFRVEADLRNEKINYKIREHSVHKLPYQIVIGEKEKAAGVVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M L+ +I Sbjct: 613 QDLGQMPLDTLIERWQREIEAR 634 >gi|327252835|gb|EGE64489.1| threonyl-tRNA synthetase [Escherichia coli STEC_7v] Length = 622 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 144/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 212 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 269 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 270 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 328 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 329 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNGCIRLVYDM 387 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 388 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 430 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 431 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 479 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G IW V +++ + Sbjct: 480 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPIWLAPVQVVIMNIT------DSQSE 533 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +LS G V D E+IG + L P ++ G K V KV ++ R Sbjct: 534 YVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 593 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 594 KDLGSMDVNEVIEKLQQEIRSR 615 >gi|170721151|ref|YP_001748839.1| threonyl-tRNA synthetase [Pseudomonas putida W619] gi|229558042|sp|B1J6U4|SYT_PSEPW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|169759154|gb|ACA72470.1| threonyl-tRNA synthetase [Pseudomonas putida W619] Length = 640 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 78/442 (17%), Positives = 146/442 (33%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + + G+ W G + +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRKIGKQLDLF--HLQEEAPGMVFWHANGWTVYQVLEQYMRQVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW SG + +Y + M + P + +F +KSY Sbjct: 289 YSEIKTPQVVDRILWERSGHWSNYAENMFT-TSSESRDYAVKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + K + L + Sbjct: 348 RDLPLRLAEFGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEDQVKKEA-ADFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + M+ + P S E D + ++ Sbjct: 407 YKDFGFTDVAMKLSTRPAKRVGSEE-----------------LWDRAEGALADALNESGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L N + + + A++ Sbjct: 450 EWEYQPGEGAFYGPKIEF---TLRDCLGRNWQCGTLQYDPNLP--------ERLDASYIA 498 Query: 305 ADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+ ++ + ++P +AP + ++NI D Sbjct: 499 EDNARKRPVMLHRAILGSFERFIGMLI---EHYAGVFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L+ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FALQVEKSLNGSGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVETQTVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + + +H S Sbjct: 613 ADLGSMPVAQFVELLTHAVSRR 634 >gi|146306290|ref|YP_001186755.1| prolyl-tRNA synthetase [Pseudomonas mendocina ymp] gi|166980142|sp|A4XRQ7|SYP_PSEMY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|145574491|gb|ABP84023.1| prolyl-tRNA synthetase [Pseudomonas mendocina ymp] Length = 571 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 114/237 (48%), Positives = 161/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L L+E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V ++REE Sbjct: 1 MRTSQFLLSTLKETPSDAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q A+LW ESGR+ YG E+LR+ DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPAIQPAELWQESGRWVQYGPELLRVKDRHEREFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M + Sbjct: 121 ELNSYKQLPINMYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQETYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y +F RLGL P++A++G IGG SHEF VLA++GE + + D+ E Sbjct: 181 YCNVFSRLGLNFRPVQADTGSIGGTGSHEFHVLAESGEDDIAF-SNVSDYAANIEKA 236 Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 72/193 (37%), Positives = 110/193 (56%), Gaps = 4/193 (2%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ + RGIEVGHIF GTKYS M+ G +GK + Sbjct: 378 PLPTVADLRNVVAGDPSPDGQGTLEIKRGIEVGHIFQLGTKYSEAMNCQVLGENGKPVTL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE +HD +GI+W D++APF I+L+ ++ + R+A +K+YA L Sbjct: 438 TMGCYGIGVSRVVAAAIEQNHDERGILWNDALAPFHIALVPLRYETEQVREATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD + G +FA +L+G P +V+V + +++ +E K R + + Sbjct: 498 TAAGYEVLLDDRDKKTSPGIKFADMELIGIPHRVVVSDRGLAEGNLEYKSRAETEAQAVP 557 Query: 431 LEEVINYASHRFS 443 L E++ + R S Sbjct: 558 LAEILPFLQARIS 570 >gi|300924761|ref|ZP_07140703.1| threonyl-tRNA synthetase [Escherichia coli MS 182-1] gi|300419049|gb|EFK02360.1| threonyl-tRNA synthetase [Escherichia coli MS 182-1] Length = 642 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNGCIRLVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ D Sbjct: 500 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT------DSQSD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +LS G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVQSGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 614 KDLGSMDVNEVIEKLQQEIRSR 635 >gi|319794591|ref|YP_004156231.1| threonyL-tRNA synthetase [Variovorax paradoxus EPS] gi|315597054|gb|ADU38120.1| threonyl-tRNA synthetase [Variovorax paradoxus EPS] Length = 635 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 140/443 (31%), Gaps = 38/443 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L I + + G+ W P G V +R T Sbjct: 230 QYIQRIEEAEKRDHRKLGKELDLF--HIDEVAPGVVFWHPKGWAVWQAVEQYMRGIYRDT 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + LW ++G + +Y M + + P + IF+S ++S Sbjct: 288 GYWEVKGPQILDKSLWEKTGHWQNYRDNMFT-TESEKREYALKPMNCPGHVLIFKSDLRS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + + R+E G+MR R F D + F + + Sbjct: 347 YRDLPLRYGEFGQCHRNEPSGALHGIMRVRGFTQDDGHIFCTEDQILDECIAYT-EQLQK 405 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G I + + P S E D + Sbjct: 406 VYADFGFTDILYKVATRPENRVGSDE-----------------LWDKAEHAVMESLRRSG 448 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I A Y + L D++ + ++ G +Y Sbjct: 449 VDFIISPGDGAFYGPKIEY---TLRDAIGRQWQCGTMQVDFNTAERLGGEY-------VT 498 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + G+ H V + +G++ ++ H G W + + + D Sbjct: 499 ESSGRAHPVMLHRAIVGSLERFIGMLIEHHSGALPAW------LAPVQVAVLNISEGQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L G V D E+I + L P ++VG K V ++ R Sbjct: 553 YAAQVAKTLQNQGLRVQLDLHNEKITYKIRKHSLQKLPYILVVGDKEKEAGAVAVRARGN 612 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 MSLE + ++ R Sbjct: 613 QDLGAMSLESFVQRLVQDVADKR 635 >gi|312795972|ref|YP_004028894.1| Threonyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454] gi|312167747|emb|CBW74750.1| Threonyl-tRNA synthetase (EC 6.1.1.3) [Burkholderia rhizoxinica HKI 454] Length = 643 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 76/440 (17%), Positives = 142/440 (32%), Gaps = 41/440 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + + G+ W P G V +R G Sbjct: 239 YLHMLEEAEKRDHRKLGKQLDLF--HLQEEAPGLVFWHPKGWALWQQVEQYLRRRLGEAG 296 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + + P + +F + SY Sbjct: 297 YLEVKTPMIMDRSLWERSGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFNHSLHSY 355 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F + R+E G+MR R F+ DA+ F + S + + Sbjct: 356 RDLPLRFAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQVIAESIAFN-SLAMSV 414 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ P + E A+ G + + + Sbjct: 415 YKDFGFEQIDIKLALRPQQRAGTDETWDRAEQGLREALAACSLQWQEL------------ 462 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + H + D+L + + ++ G A + Sbjct: 463 -----DGEGAFYGPKIEYH---IKDALGRSWQCGTLQLDFVLPERLG--------AEYVA 506 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G +W +++ + D Sbjct: 507 EDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPLWLAPSQVVVMNIA------ESSAD 560 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + L K G D E+I + L P +VG K V ++ R Sbjct: 561 YANIVAQSLKKQGFRAAADLRNEKISYKIREHALEKVPYLAVVGDKERDAQTVAVRARGG 620 Query: 424 GIREDMSLEEVINYASHRFS 443 M +E + + Sbjct: 621 VDLGVMPVEAFLERLHNEVR 640 >gi|170723171|ref|YP_001750859.1| prolyl-tRNA synthetase [Pseudomonas putida W619] gi|226701321|sp|B1JD82|SYP_PSEPW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|169761174|gb|ACA74490.1| prolyl-tRNA synthetase [Pseudomonas putida W619] Length = 571 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 125/282 (44%), Positives = 177/282 (62%), Gaps = 10/282 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + + V A++REE Sbjct: 1 MRTSQYLLATQKETPADAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P++Q A+LW ESGR++ YG E+LRL DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPSIQPAELWQESGRWEQYGPELLRLKDRHQRDFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M + Sbjct: 121 ELSSYKQLPLNMYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQETYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL P++A++G IGG SHEF VLA++GE V S D+ E + Sbjct: 181 YSNIFTRLGLDFRPVQADTGSIGGSYSHEFHVLAESGEDDVIFSDS-SDYAANIEKAEA- 238 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 + + TA A T ++ D+ + V G+ Sbjct: 239 --------IPRETARLAPTEELRLVDTPDAKTIAQLVENYGL 272 Score = 162 bits (411), Expect = 7e-38, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 114/207 (55%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ + V RGIEVGHIF GTKYS + Sbjct: 364 DDKHYFGVNWERDLPVPQVADLRNVVEGDPSPDGQGTLVIKRGIEVGHIFQLGTKYSEAL 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK + MG YGIG RVVAA IE S+D KGIIW D++APF+I+L+ ++ Sbjct: 424 KCQVLGENGKPVVLSMGCYGIGVSRVVAAAIEQSYDDKGIIWNDALAPFQIALVPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 V R+A +K+YA L+ G +V DD + G +FA +L+G P +++V + ++D + Sbjct: 484 DVVREATDKLYAELTAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLADGNL 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E KHR + + L EV+ + R Sbjct: 544 EYKHRTEQDAQALPLNEVLTFLQARVR 570 >gi|331663198|ref|ZP_08364108.1| threonine--tRNA ligase [Escherichia coli TA143] gi|331683225|ref|ZP_08383826.1| threonine--tRNA ligase [Escherichia coli H299] gi|331058997|gb|EGI30974.1| threonine--tRNA ligase [Escherichia coli TA143] gi|331079440|gb|EGI50637.1| threonine--tRNA ligase [Escherichia coli H299] Length = 642 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 78/442 (17%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNGCIRLVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ + Sbjct: 500 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT------DSQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +LS G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 614 KDLGSMDVNEVIEKLQQEIRSR 635 >gi|205352944|ref|YP_002226745.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|238690498|sp|B5RAX3|SYT_SALG2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|205272725|emb|CAR37641.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628018|gb|EGE34361.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 642 Score = 258 bits (659), Expect = 2e-66, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 142/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMGRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDE-VNACIRMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPDKRIGSDE-----------------MWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ + Sbjct: 500 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNIT------DSQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + +VI + Sbjct: 614 KDLGSLDVNDVIEKLQQEIRSR 635 >gi|253577580|ref|ZP_04854892.1| threonyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251843049|gb|EES71085.1| threonyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 645 Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats. Identities = 78/442 (17%), Positives = 166/442 (37%), Gaps = 37/442 (8%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L + T + +G+ WLP G + I + + R G Sbjct: 235 LHMLEEAKKRDHRKLGKELNIFT-FNNLVGQGLPIWLPKGATVRRTLERYIVDIEERLGY 293 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L + DL+ SG ++ Y ++M + + + P + +++S ++SYR Sbjct: 294 QHVYTPVLGNVDLYKTSGHWEHYQEDMFPKMAIDTEEFVLRPMNCPHHMMVYKSDMRSYR 353 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ ++ R E+ G+ R R + DA+ F + + ++ +++ Sbjct: 354 DLPIRIAELGMQHRYEMSGALTGLHRVRSMTLNDAHIFCRLDQIKDE-FKRVLDLIKQVY 412 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS-KDFMDFPIPSENTDFDDIIS 244 + G+ R D +T+ + + + ++ Sbjct: 413 NDFGIHEYRFRLS--------------YRDPQDTEKYYQNDEMWNTAQRMLREVVEEAGL 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ +L + + +S I+ F ++ + G Sbjct: 459 PFFEAEGEAAFYGPKLDV---QIKTALGKEETLSTVQID----FLLPERF----ELEYVG 507 Query: 305 ADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + +G M A + + P +AP + ++ + ++ Sbjct: 508 DDGQKHRPVVLHRGILGTMERFTAFLL---ENFAGNLPLWLAPVQAKVLPVSSN---FDA 561 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G D E++G + A L P ++VG + V ++ R Sbjct: 562 YARQVEDKLRAAGIRAESDLRNEKLGYKIREAQLEKLPYMLVVGENEQNAGTVSVRKRGQ 621 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G +++EVI N+ Sbjct: 622 GDLGAKAVDEVIAQLQEEIRNH 643 >gi|138896280|ref|YP_001126733.1| threonyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2] gi|134267793|gb|ABO67988.1| Threonyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2] Length = 649 Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats. Identities = 82/442 (18%), Positives = 166/442 (37%), Gaps = 32/442 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L T + +G+ WLP G + I +++ G Sbjct: 234 YLQLLEEAKERDHRKLGKELELFTT-SQKVGQGLPLWLPKGATIRRLIERYIVDKEIALG 292 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P L S +L+ SG +D Y + M + +++ ++ P + I++S + SY Sbjct: 293 YDHVYTPVLGSVELYKTSGHWDHYKENMFPPMEMDNEELVLRPMNCPHHMMIYKSKLHSY 352 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP ++ R E+ G+ R R + DA+ F + + ++ L + Sbjct: 353 RELPIRIAELGTMHRYEMSGALTGLQRVRGMTLNDAHIFVRPDQIKDE-FKRVVNLILEV 411 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + GL R + + + + D++ Sbjct: 412 YKDFGLDEYSFRLSYRDPQDKE-------------KYYDDDEMWEKAQRMLREAMDELGL 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ +L +++ +S ++ F ++ T+ G Sbjct: 459 DYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFD----LTYIG 507 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DGK H + G + + + + +P +AP ++ +I + + D Sbjct: 508 EDGKPHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVEVIPV--SSEAHLDY 563 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ L G V D+ E+IG + A + P ++VG K ++ V ++ Sbjct: 564 AYEVKQALQVNGFRVEVDERDEKIGYKIREAQMQKIPYMLVVGDKEAAERAVNVRRYGEK 623 Query: 425 IREDMSLEEVINYASHRFSNNR 446 E ++L++ I R Sbjct: 624 ESETVALDKFIAMLEEDVRQKR 645 >gi|229133217|ref|ZP_04262049.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST196] gi|228650236|gb|EEL06239.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST196] Length = 639 Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats. Identities = 76/447 (17%), Positives = 155/447 (34%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + +Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 231 KLEEYLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQ 288 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N E+ P + + +LW +SG + Y M ++ + K+ P + +F++ Sbjct: 289 NEYNYQEVRTPFMMNQELWEKSGHWGHYKDNM-YFSEVDHKSFALKPMNCPGHMLMFKNK 347 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP + R E G++R R F DA+ +TPE + + Sbjct: 348 LHSYRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVLAQ 406 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++ G E+ V T + + Sbjct: 407 IDYVYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAELALENVLQ 448 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + E A Y D H + D+L + + ++ F K+ Sbjct: 449 SLNYKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTVQLD----FQMPEKFD----L 497 Query: 301 TFKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + + + + +G++ A++ G W + + I + Sbjct: 498 NYIDENNEKRRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNA 552 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 V +I +L++ G V D E++G + A + P +++G K + V ++ Sbjct: 553 VHEKYANRIADKLAQAGIRVERDIRDEKLGYKIREAQMQKVPYVLVIGDKEMESEAVNVR 612 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 E + L+ + N + Sbjct: 613 KYGEEKSEVVELDAFVESMKEEIKNRK 639 >gi|218548710|ref|YP_002382501.1| threonyl-tRNA synthetase [Escherichia fergusonii ATCC 35469] gi|226701412|sp|B7LQ71|SYT_ESCF3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|218356251|emb|CAQ88868.1| threonyl-tRNA synthetase [Escherichia fergusonii ATCC 35469] gi|324113470|gb|EGC07445.1| threonyl-tRNA synthetase [Escherichia fergusonii B253] Length = 642 Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats. Identities = 78/442 (17%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNGCIRLVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ + Sbjct: 500 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT------DSQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +LS G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 614 KDLGSMDVNEVIEKLQQEIRSR 635 >gi|15802131|ref|NP_288153.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 EDL933] gi|15831680|ref|NP_310453.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai] gi|168762217|ref|ZP_02787224.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501] gi|168788115|ref|ZP_02813122.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869] gi|168800100|ref|ZP_02825107.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508] gi|187776029|ref|ZP_02799987.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196] gi|188024843|ref|ZP_02774486.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113] gi|189010441|ref|ZP_02807141.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076] gi|189402338|ref|ZP_02781727.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401] gi|189403439|ref|ZP_02795487.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486] gi|208810744|ref|ZP_03252620.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206] gi|208816647|ref|ZP_03257767.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045] gi|209400429|ref|YP_002270789.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115] gi|217328990|ref|ZP_03445071.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588] gi|254793336|ref|YP_003078173.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359] gi|291282899|ref|YP_003499717.1| Threonyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615] gi|22654116|sp|Q8XE27|SYT_ECO57 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238065112|sp|B5YQ07|SYT_ECO5E RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|12515733|gb|AAG56706.1|AE005395_2 threonine tRNA synthetase [Escherichia coli O157:H7 str. EDL933] gi|13361893|dbj|BAB35849.1| threonine tRNA synthetase [Escherichia coli O157:H7 str. Sakai] gi|187769425|gb|EDU33269.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196] gi|188016225|gb|EDU54347.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113] gi|189000290|gb|EDU69276.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076] gi|189356196|gb|EDU74615.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401] gi|189360618|gb|EDU79037.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486] gi|189367509|gb|EDU85925.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501] gi|189372060|gb|EDU90476.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869] gi|189377572|gb|EDU95988.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508] gi|208725260|gb|EDZ74967.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206] gi|208730990|gb|EDZ79679.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045] gi|209161829|gb|ACI39262.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115] gi|209768828|gb|ACI82726.1| threonine tRNA synthetase [Escherichia coli] gi|209768830|gb|ACI82727.1| threonine tRNA synthetase [Escherichia coli] gi|209768832|gb|ACI82728.1| threonine tRNA synthetase [Escherichia coli] gi|209768834|gb|ACI82729.1| threonine tRNA synthetase [Escherichia coli] gi|209768836|gb|ACI82730.1| threonine tRNA synthetase [Escherichia coli] gi|217318337|gb|EEC26764.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588] gi|254592736|gb|ACT72097.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359] gi|290762772|gb|ADD56733.1| Threonyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615] gi|320188406|gb|EFW63068.1| Threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212] gi|320652208|gb|EFX20506.1| threonyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687] gi|320657809|gb|EFX25571.1| threonyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658384|gb|EFX26078.1| threonyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905] gi|326342086|gb|EGD65867.1| Threonyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044] gi|326343638|gb|EGD67400.1| Threonyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125] Length = 642 Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats. Identities = 78/442 (17%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNGCIRLVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ + Sbjct: 500 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT------DSQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +LS G V D E+IG + L P ++ G K V K+ ++ R Sbjct: 554 YVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 614 KDLGSMDVNEVIEKLQQEIRSR 635 >gi|293392211|ref|ZP_06636545.1| threonyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952745|gb|EFE02864.1| threonyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 643 Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats. Identities = 77/447 (17%), Positives = 155/447 (34%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ + +L L+E RD L L + + + G+ W G + +R + Sbjct: 227 KQLEAYLHRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTK 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + E+ P + LW ++G + +Y +++ ++ P + IF Sbjct: 285 LKQYDYQEVKGPFMMDRVLWEKTGHWQNY-GDLMFTTSSENREYAIKPMNCPGHVQIFNQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F + + Sbjct: 344 GLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCMPDQVESE-VTSCIK 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 I+ G ++I ++ + P S E D Sbjct: 403 MVYDIYSTFGFENIKVKLSTRPEKRIGSDE-----------------MWDKAEADLAKAL 445 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + I E A Y + L DSL + ++ F+ + ++ Sbjct: 446 EHNGLSYEIQEGEGAFYGPKLEF---ALTDSLDREWQCGTIQLD----FFLPER----LN 494 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A++ G D + + +G++ +I + G +W +++ Sbjct: 495 ASYVGEDNERKIPVMIHRAILGSIERFIGIITEEYAGFFPVWLAPTQAVVMNIT------ 548 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + +K+ +LS G V D E++G + L P ++ G K + KV + Sbjct: 549 DSQSEYVQKVAKQLSDAGLRVKTDLRNEKVGFKIREHTLHRVPYMLVCGDKEIEAGKVAV 608 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R ++EE ++ + N Sbjct: 609 RTRKGQDLGTFTVEEFLDILKKQVRNR 635 >gi|310767522|gb|ADP12472.1| threonyl-tRNA synthetase [Erwinia sp. Ejp617] Length = 642 Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 139/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L I + RD +L L + + + G+ W G + +R + Sbjct: 232 YLLRIEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y + M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKEAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDE-VNSCIKMVYDT 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S D D + Sbjct: 408 YSTFGFEKIVVKLSTRPEKR-----------------IGSDDLWDRSEADLAAALKENDI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ F + ++A++ G Sbjct: 451 PFEYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGR----LNASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+M ++ + G W V +++ + Sbjct: 500 ESNERQVPVMIHRAILGSMERFIGILTEEYAGFFPTWLAPVQVVVMNIT------DGQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVAELTRKLQNAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + E I + Sbjct: 614 KDLGSIDVNEAIAKLQDEIRSR 635 >gi|260551943|ref|ZP_05825805.1| threonyl-tRNA synthetase [Acinetobacter sp. RUH2624] gi|260405346|gb|EEW98841.1| threonyl-tRNA synthetase [Acinetobacter sp. RUH2624] Length = 640 Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats. Identities = 77/441 (17%), Positives = 142/441 (32%), Gaps = 38/441 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD L L + + + G+ W G + +R+ Q G Sbjct: 231 YIKRIEEAEKRDHRKIGKALDLF--HMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +Y + M + P + +F +KSY Sbjct: 289 YQEIKTPQIVDFTLWEKSGHAANYAENMFT-THSESRNYAVKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + K L + Sbjct: 348 RDLPIRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGKE-VADFIQLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + M+ + P D S D Sbjct: 407 YKDFGFEEVQMKLSTRPEKR-----------------VGDDALWDLAEKSLADALDAAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + + F + Sbjct: 450 KWELQPGEGAFYGPKIEF---SLKDCLGRVWQCGTIQCD----FNLPVRLDASY---VTE 499 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + +D V + +G+ ++ + P ++P + ++NI +A Sbjct: 500 ENERDQPVMLHRAILGSFERFIGILI---EHYAGFMPPWLSPVQACVMNIT---DAQAEA 553 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++ A+L + G D E+IG + L P +++G + V + V ++ R Sbjct: 554 SEQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGK 613 Query: 425 IREDMSLEEVINYASHRFSNN 445 MS++ I+ + Sbjct: 614 NLGTMSVDAFIDLVKSAVAER 634 >gi|259908578|ref|YP_002648934.1| threonyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96] gi|224964200|emb|CAX55707.1| Threonyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96] gi|283478547|emb|CAY74463.1| thrS [Erwinia pyrifoliae DSM 12163] Length = 642 Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 139/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L I + RD +L L + + + G+ W G + +R + Sbjct: 232 YLLRIEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y + M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKEAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDE-VNSCIKMVYDT 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S D D + Sbjct: 408 YSTFGFEKIVVKLSTRPEKR-----------------IGSDDLWDRSEADLAAALKENDI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ F + ++A++ G Sbjct: 451 PFEYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGR----LNASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+M ++ + G W V +++ + Sbjct: 500 ESNERQVPVMIHRAILGSMERFIGILTEEYAGFFPTWLAPVQVVVMNIT------DGQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVAELTRKLQNAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + E I + Sbjct: 614 KDLGSIDVNEAIAKLQDEIRSR 635 >gi|148264672|ref|YP_001231378.1| threonyl-tRNA synthetase [Geobacter uraniireducens Rf4] gi|146398172|gb|ABQ26805.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Geobacter uraniireducens Rf4] Length = 645 Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats. Identities = 86/441 (19%), Positives = 151/441 (34%), Gaps = 41/441 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E R D +L L + + G+ W P G + R+E R G Sbjct: 241 YLARLEEAKRRDHRKLGKELDLFS-FSDEVGAGLVIWHPKGAMLRTILEDFERKEHFRRG 299 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +LW SG YD+Y + M + +++ P + I++S ++SY Sbjct: 300 YDIVVGPQILKTELWQRSGHYDNYRENM-YFTEVDEQGYGIKPMNCLAHMMIYKSQLRSY 358 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++++ R E G++R R F DA+ + + + Sbjct: 359 RDLPLRYFELGTVHRHERAGVLHGLLRVRGFTQDDAHILCTPEQLDGE-IKGVLSFVKDV 417 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G + + P S E + + D Sbjct: 418 MGIFGFEYEM-ELSTRPEKSIGSDE-----------------DWERATKALLGALQDSGR 459 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ KL D+L + + + F ++ T+ G Sbjct: 460 PFEINEGDGAFYGPKIDI---KLRDALDRRWQCATIQCD----FTLPERFD----LTYIG 508 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ + +GA+ V+ G +W V +++ Sbjct: 509 ADGEKKRPVMVHRVILGAIERFIGVLIEHFAGSFPVWLAPVQAIVLTVT------DNQVS 562 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +IY L G V D E++G + A L P +I+G K V V + R Sbjct: 563 YANEIYTALRAAGIRVQQDFRNEKLGFKIREAQLQKIPYMLIIGDKEVESGMVTPRFRDG 622 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M E+I + + Sbjct: 623 NNLDSMKPAELIEFIEKEVKS 643 >gi|261867949|ref|YP_003255871.1| threonyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413281|gb|ACX82652.1| threonyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 643 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 78/447 (17%), Positives = 155/447 (34%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ + +L L+E RD L L + + + G+ W G + +R + Sbjct: 227 KQLEAYLHRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTK 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + E+ P + LW ++G + +Y +++ ++ P + IF Sbjct: 285 LKQYDYQEVKGPFMMDRVLWEKTGHWQNY-GDLMFTTSSENREYAIKPMNCPGHVQIFNQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F + + Sbjct: 344 GLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCMPDQVESE-VTSCIK 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 I+ G ++I ++ + P S E D Sbjct: 403 MVYDIYSTFGFENIKVKLSTRPEKRIGSDE-----------------MWDKAEADLAKAL 445 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + I E A Y + L DSL + ++ F+ + ++ Sbjct: 446 EHNSLSYEIQEGEGAFYGPKLEF---ALTDSLDREWQCGTIQLD----FFLPER----LN 494 Query: 300 ATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A++ G D + V + +G++ +I + G W +++ Sbjct: 495 ASYVGEDNERKVPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPTQVVVMNIT------ 548 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + +K+ +LS G V D E++G + L P ++ G K + KV + Sbjct: 549 DSQSEYVQKVAKQLSDAGLRVKTDLRNEKVGFKIREHTLRRVPYMLVCGDKEIEAGKVAV 608 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R ++EE ++ + N Sbjct: 609 RTRKGQDLGTFTVEEFLDILKKQVRNR 635 >gi|258544548|ref|ZP_05704782.1| threonine--tRNA ligase [Cardiobacterium hominis ATCC 15826] gi|258520179|gb|EEV89038.1| threonine--tRNA ligase [Cardiobacterium hominis ATCC 15826] Length = 639 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 69/438 (15%), Positives = 141/438 (32%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + RD +L + + + G+ W G + +R + + G Sbjct: 232 YLQQQAEAEKRDHRRIGKQLDFF--HLQEEAPGMVFWHAKGWVIYREIENYMRGKLRKYG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D +G M ++ P + IF ++SY Sbjct: 290 YEEVQGPQILDRSLWEKSGHWDKFGGNMFTC-CIDEHDYAIKPMNCPGHIQIFNQGLRSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + + + R+E G+MR R F+ D + F + + ++ + Sbjct: 349 RELPVRYAEFGICHRNEPSGTLHGLMRVRRFVQDDGHIFCTRSQIREE-IERVCQMVYEV 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 +H G + + + P S E D + Sbjct: 408 YHDFGFDEVELALSTRPEKRVGSDE-----------------IWDEAEADLQAALEAQGK 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L DSL + ++ G A + Sbjct: 451 PFRLQPGEGAFYGPKIEF---TLKDSLGRRWQCGTVQLDFSMPERLG--------AHYID 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + +G++ ++ + P ++P + ++ I D Sbjct: 500 ENDVRQTPVMIHRAILGSLERFIGILI---EQYAGQMPLWLSPVQAVVMPIT---DAQAD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + +L+ G V D E+I + L P ++ G + + S V ++ R Sbjct: 554 YATAVAEKLATAGLRVEKDLRNEKINYKIREHTLQRVPFMLVAGDREKAASSVSVRQRDG 613 Query: 424 GIREDMSLEEVINYASHR 441 MS++++I + Sbjct: 614 KDLGVMSVDDLITHLQQL 631 >gi|324326401|gb|ADY21661.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 639 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 75/444 (16%), Positives = 155/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ ++L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGNELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TPE + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALANVLHSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 CKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + I + V Sbjct: 501 DEKNEKRRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHV 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 ++I +L++ G V D GE++G + A + P +++G K + + V ++ Sbjct: 556 QYADEIADKLAQAGVRVERDVRGEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E + L + N + Sbjct: 616 EEKSEVIELNGFVESIKEEIKNKK 639 >gi|332878705|ref|ZP_08446422.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683342|gb|EGJ56222.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 647 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 84/446 (18%), Positives = 158/446 (35%), Gaps = 38/446 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD +L L T ++ +G+ WLP G + + A +R+ Q Sbjct: 227 LTEYLTLLEEAKKRDHRKLGKELELFT-FSNKVGQGLPLWLPKGAALRERLEAFLRKAQK 285 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRS 120 G ++ P + +L+V SG +D YGK+ + + + P + +I+ S Sbjct: 286 EAGYEQVVTPHIGHKNLYVTSGHWDKYGKDSFQPIATPNEGEEYLLKPMNCPHHCEIYNS 345 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 H SY++LP F + +R E G+ R R F DA+ F TPE + + Sbjct: 346 HPWSYKDLPKRFAEFGTVYRYEQSGELHGLTRVRCFTQDDAHIFC-TPEQLDAEFKHVID 404 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L +F LG + + D + D + + Sbjct: 405 LVLYVFGSLGFDNFTAQVSLR--------------DPDNPTKYIGTDENWAKAENAIINA 450 Query: 240 DDIISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 LN ++E A Y D + D+L + ++ ++ Sbjct: 451 AKEKGLNYVIETGEAAFYGPKLDFM---VKDALGRSWQLGTIQVDYNLP--------ERF 499 Query: 299 SATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 +KGAD + H + G+M A++ G +W + + + Sbjct: 500 DLWYKGADNEMHRPVMIHRAPFGSMERFVAILLEHTAGNFPLW------LNPNQAIVLSL 553 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + + +K+ L D+ E +G + A+ P +IVG + V Sbjct: 554 SEKYENYAQKVLRLLENSDIRTLIDNRAETMGKKIREAETQKVPYMLIVGENEEKEGTVS 613 Query: 418 IKHRLTGIREDMSLEEVINYASHRFS 443 ++ R MS+E + + Sbjct: 614 VRKRGGEDLGSMSVEAFAKLINDEVA 639 >gi|239827997|ref|YP_002950621.1| threonyl-tRNA synthetase [Geobacillus sp. WCH70] gi|259516491|sp|C5D639|SYT_GEOSW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|239808290|gb|ACS25355.1| threonyl-tRNA synthetase [Geobacillus sp. WCH70] Length = 644 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 82/440 (18%), Positives = 162/440 (36%), Gaps = 30/440 (6%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L LQE RD +L L + +G+ WLP G + I +++ G Sbjct: 234 YLRQLQEAKERDHRKLGKELELFMT-SQKVGQGLPLWLPKGATIRRIIERYIVDKEIELG 292 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P L S +L+ SG +D Y M + +++ ++ P + I++S I SY Sbjct: 293 YQHVYTPVLGSVELYKTSGHWDHYKDNMFPPMEMDNEQLVLRPMNCPHHMMIYKSKIHSY 352 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 R LP ++ R E+ ++ + + + P+ K + ++ L ++ Sbjct: 353 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFKRVVNLILEVY 412 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 GL R + + + + D++ Sbjct: 413 KDFGLDEYSFRLSYRDPHDKE-------------KYYDDDEMWEKAQNMLREAMDELGLE 459 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y DV ++ +L +++ +S ++ F ++ T+ G Sbjct: 460 YYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFD----LTYIGE 508 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DGK H + G + + + + +P +AP ++ +I + D Sbjct: 509 DGKPHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVEVIPVSP--AAHLDYA 564 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 K+ L G V D+ E+IG + A + P ++VG K ++++ V ++ Sbjct: 565 YKVKEALQSQGFRVEVDERDEKIGYKIREAQIQKIPYMLVVGDKEMAENAVNVRKYGEQK 624 Query: 426 REDMSLEEVINYASHRFSNN 445 E MSL++ I N Sbjct: 625 SETMSLDDFIAALKAEVRRN 644 >gi|188025947|ref|ZP_02960307.2| hypothetical protein PROSTU_02247 [Providencia stuartii ATCC 25827] gi|188021023|gb|EDU59063.1| hypothetical protein PROSTU_02247 [Providencia stuartii ATCC 25827] Length = 653 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 72/443 (16%), Positives = 143/443 (32%), Gaps = 40/443 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + RD +L L + + + G+ W G + +R + Sbjct: 243 YLLRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMAFWHNDGWTIFRELETFVRTKLKAYN 300 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +G +++Y M ++ P + IF +KSY Sbjct: 301 YQEVKGPFMMDRVLWERTGHWENYKDAMFT-TSSENREYCVKPMNCPGHVQIFNQGLKSY 359 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + + Sbjct: 360 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQILSE-VTDCIKMIYDV 418 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P + D D D Sbjct: 419 YATFGFEKIVVKLSTRPEKR-----------------IGTDDMWDTAEADLAQALKDQGI 461 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F+ + ++A++ G Sbjct: 462 EFEYQPGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FFLPGR----LNASYVG 510 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + V + +G++ ++ + G W +++ D Sbjct: 511 ENNERIVPVMIHRAVLGSLERFIGILTEEYAGFFPTWLAPQQVVVMNIT------DTQAD 564 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ ++L VG D E+IG + L P ++ G K V KV ++ R Sbjct: 565 YVQELVSKLQSVGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVSVRTRRG 624 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 + + E N + + Sbjct: 625 KDLGSLDVNEFTNKLLEEIRSRQ 647 >gi|327402300|ref|YP_004343138.1| Ser-tRNA(Thr) hydrolase [Fluviicola taffensis DSM 16823] gi|327317808|gb|AEA42300.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Fluviicola taffensis DSM 16823] Length = 647 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 86/447 (19%), Positives = 163/447 (36%), Gaps = 38/447 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD +L L T + +G+ WLP G + + +++ Q Sbjct: 228 LTEYLERVEEAKRRDHRKVGKELELFT-FSQKVGQGLPLWLPKGAALRERLENFLKKAQR 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRS 120 + G ++ P + + +L+V SG Y+ YG + + D+ + P + +I++S Sbjct: 287 KAGYEQVITPHIGNKELYVTSGHYEKYGADSFQAIKTPDPDEEFLLKPMNCPHHCEIYKS 346 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SY++LP F + +R E G+ R R F DA+ F T + K + K+ Sbjct: 347 KPRSYKDLPARFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFC-TQDQVKEEFKKVID 405 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L IF L ++ + D + D S + Sbjct: 406 LVLYIFKTLDFQNFKAQISLR--------------DPENPSKYIGSDENWEKAESAIIEA 451 Query: 240 DDIISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 +L ++VE A Y D + D+L ++ ++ Sbjct: 452 AAEKNLPTVVELGEAAFYGPKLDFM---VQDALGREWQLGTIQVDYNLP--------ERF 500 Query: 299 SATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + GAD + H + G+M AV+ G +W + I Sbjct: 501 ELEYTGADNQKHRPVMIHRAPFGSMERFVAVLLEHCGGDFPLW------LATDQVAILPI 554 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + + + L+ F DD E+IG + A+L P ++VG K + +V Sbjct: 555 SDKYNEYAKDVLELLNNSDIRGFVDDRNEKIGKKIREAELKKIPFMLVVGEKEAEEKQVS 614 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSN 444 ++ R G + MS++ + Sbjct: 615 VRQRGEGDKGSMSIDAFAAIVNQAIEK 641 >gi|288818602|ref|YP_003432950.1| threonyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] gi|288788002|dbj|BAI69749.1| threonyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] gi|308752193|gb|ADO45676.1| threonyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] Length = 637 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 92/441 (20%), Positives = 162/441 (36%), Gaps = 42/441 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMI--HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + RD L I G+ WLP G + REE + G Sbjct: 235 EEAKKRDHRKLGRDLE---FFIIDEDVGPGLVLWLPKGGIYRKILEDYWREEHLKRGYQF 291 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 + P + +A LW SG D Y M + + P + I++S ++SY+ L Sbjct: 292 VYTPHIGNAKLWQISGHLDYYRPNMFSSMQVDQEEYFVKPMNCPFHIAIYKSKVRSYKEL 351 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P ++ +R E+ G+MR R F DA+ T E + ++ + + Sbjct: 352 PLKLAELGTVYRYEMSGVLHGLMRVRGFTQDDAHIIC-TEEQVEDVIHQTLEFAISMLRD 410 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 G EF V T S D S + + Sbjct: 411 FG-----------------FEEFKVYISTKPEDAIGSPDQWQLAENSLKKAVESMGIPYQ 453 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 I E A Y DV K+ D++ + S + F ++ + + G D Sbjct: 454 IDEGGGAFYGPKIDV---KIKDAIGRLWQCSTIQFD----FNLPERFDM----EYVGPDN 502 Query: 308 KDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 K H + +G++ ++ + G +W ++P ++ LI I + D + Sbjct: 503 KRHRPYMIHRALLGSIERFTGILLEHYAGALPVW---LSPVQVRLIPIG---EAHMDYTK 556 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+ RL + G V DD E++ ++ A++ P +++G K VS K+ ++ + G Sbjct: 557 KLENRLKEEGLRVEVDDRDERLSAKIRDAEVQKIPYVIVIGDKEVSQGKISVRSKKEGNL 616 Query: 427 EDMSLEEVINYASHRFSNNRP 447 MS+EE I + + + P Sbjct: 617 GSMSVEEFIKHIKDKIKSKAP 637 >gi|282599730|ref|ZP_05971662.2| threonine--tRNA ligase [Providencia rustigianii DSM 4541] gi|282568410|gb|EFB73945.1| threonine--tRNA ligase [Providencia rustigianii DSM 4541] Length = 653 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 68/443 (15%), Positives = 141/443 (31%), Gaps = 40/443 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + RD +L L + + + G+ W G + +R + Sbjct: 243 YLLRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMAFWHNDGWTIFRELETFVRTKLKSYN 300 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +G +++Y M ++ P + IF +KSY Sbjct: 301 YQEVKGPFMMDRVLWERTGHWENYKDAMFT-TSSENREYCVKPMNCPGHVQIFNQGLKSY 359 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + + Sbjct: 360 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQILSE-VTSCIEMIYDV 418 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P + D D Sbjct: 419 YSTFGFEKIVVKLSTRPEKR-----------------IGTDDMWDTAEADLANALKSKGI 461 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F+ + ++A++ G Sbjct: 462 EFEYQPGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FFLPGR----LNASYVG 510 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + +G++ ++ + G W +++ + Sbjct: 511 ENNERITPVMIHRAVLGSLERFIGILTEEYAGFFPTWLAPQQVVVMNIT------DTQAE 564 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L VG D E+IG + L P ++ G K V KV ++ R Sbjct: 565 YVQELVNKLQSVGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVSVRTRRG 624 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 + ++E + + + Sbjct: 625 KDLGSLDVDEFMTKLLKEIRSRQ 647 >gi|315634189|ref|ZP_07889478.1| threonine--tRNA ligase [Aggregatibacter segnis ATCC 33393] gi|315477439|gb|EFU68182.1| threonine--tRNA ligase [Aggregatibacter segnis ATCC 33393] Length = 643 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 71/442 (16%), Positives = 140/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD L L + + + G+ W G + +R + + Sbjct: 232 YLQRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYD 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G + +Y +++ ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWQNY-GDLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F T + + I Sbjct: 349 RDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIRMVYDI 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G +I ++ + P + E D Sbjct: 408 YSTFGFTNIFVKLSTRPEKRIGADE-----------------MWDRAEEGLANALKHNGL 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y + L D L + ++ +A++ Sbjct: 451 EYEIQEGEGAFYGPKIEF---ALRDCLDREWQCGTIQLDFALPGRL--------NASYVA 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G++ +I + G W +++ + Sbjct: 500 EDNDRRTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPTQAVVMNIT------DSQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +LS G V D E++G + L P ++ G K + KV ++ R Sbjct: 554 YVQQVAKQLSDAGLRVKTDLRNEKVGFKIREHTLRRVPYMLVCGDKEIEAGKVAVRTRKG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 ++EE + + N Sbjct: 614 QDLGTFTVEEFLEILKKQVRNR 635 >gi|146328703|ref|YP_001209437.1| threonyl-tRNA synthetase [Dichelobacter nodosus VCS1703A] gi|166223338|sp|A5EVK6|SYT_DICNV RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|146232173|gb|ABQ13151.1| threonyl-tRNA synthetase [Dichelobacter nodosus VCS1703A] Length = 640 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 72/446 (16%), Positives = 143/446 (32%), Gaps = 40/446 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + RD L L + + + G+ W G + +R + + G Sbjct: 232 YLTQQAEAEKRDHRKIGKALDLF--HLQEEAPGMVFWHAKGWTIYREIENYMRTKLRKYG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D +G M ++ P + IF +KSY Sbjct: 290 YQEVQGPQILDRSLWEKSGHWDKFGGNMFTC-CIDNHDFAVKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + + + R+E G+MR R F+ D + F + + Y Sbjct: 349 RELPIRYAEFGICHRNEPSGTLHGIMRVRRFVQDDGHIFCARNQVRVEIERTCRMVYEV- 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K++ + + P S E A+ G + +++ P E Sbjct: 408 YDDFGFKNVELALSTRPEKRVGSDEIWDEAERGLQEALEAQNLAFRLQPGE--------- 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L DSL + ++ G A + Sbjct: 459 --------GAFYGPKIEF---TLKDSLGRRWQCGTVQLDFSMPARLG--------AEYID 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 G+ + +G++ ++ + P ++P + ++ I D Sbjct: 500 EHGEKQTPVMIHRAILGSLERFIGILI---EQYAGNMPVWLSPVQAMIMPITDTHA---D 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + + G D E+I + L P ++ G + + + ++ R Sbjct: 554 YVQNVMQKFIAAGIRAEIDLRNEKISYKIREHTLQRVPFLLVAGDREKQSNTLSVRTRDG 613 Query: 424 GIREDMSLEEVINYASHRFSNNRPVL 449 M + +I + H + Sbjct: 614 KELGVMEIATIIEHIRHLIETKSQEI 639 >gi|116872988|ref|YP_849769.1| threonyl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] gi|123458497|sp|A0AJ08|SYT_LISW6 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|116741866|emb|CAK20990.1| threonyl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 640 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 167/441 (37%), Gaps = 32/441 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 F+ + +E RD +L L T I + +G+ WLP G + I +++ R G Sbjct: 230 FIQMQKEAKERDHRKLGKELELFTNSI-EVGQGLPLWLPKGATIRRVIERYIVDKEERLG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I SY Sbjct: 289 YNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 R LP ++ + R E+ ++ + + + P+ K + ++ L ++ Sbjct: 349 RELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIIS 244 +K R D T+ + D M + + D++ Sbjct: 409 KDFDIKDYSFRLS--------------YRDPKNTEKYFDDDAMWEKAQAMLKSAMDEMGM 454 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ ++ + + +S ++ F ++ T+ G Sbjct: 455 DYFEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LTYIG 503 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H + G + + + + +P +AP ++ LI + A D Sbjct: 504 EDGEKHRPVVIHR--GVVSTMERFVAYLIEEYKGAFPTWLAPVQMELIPVNA--DAHLDY 559 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + +L + G DD E++G + A P +++G + + V ++ + Sbjct: 560 SKGVQDKLQRAGLRSEVDDRNEKLGYKIREAQTKKIPYALVLGDQEMEAGSVNVRRYGSK 619 Query: 425 IREDMSLEEVINYASHRFSNN 445 E M L+ I S Sbjct: 620 DSETMDLDAFIAQVVAEVSKY 640 >gi|23099609|ref|NP_693075.1| threonine-tRNA ligase [Oceanobacillus iheyensis HTE831] gi|73919811|sp|Q8EPF3|SYT_OCEIH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|22777839|dbj|BAC14110.1| threonine-tRNA ligase [Oceanobacillus iheyensis HTE831] Length = 646 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 77/440 (17%), Positives = 162/440 (36%), Gaps = 30/440 (6%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L IL+E RD +L + T + +G+ WLP G NV I + + R G Sbjct: 234 LQILEERKERDHRKLGKELGIFTV-SQKVGQGLPLWLPKGATIRRNVERYIVDLEERLGY 292 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L + +L+ SG +D Y +M + +++ ++ P + +F++ + SYR Sbjct: 293 SHVYTPVLGNVELYKTSGHWDHYQDDMFPTMEMDNEELVLRPMNCPHHMMVFKNQLWSYR 352 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 NLP ++ R E+ ++ + + P+ K + ++ ++ Sbjct: 353 NLPVRIAELGTMHRHEMSGALAGLQRVRAMTLNDAHIFARPDQLKEEFIRVVELVQHVYK 412 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 G+ R + + + + +D+ Sbjct: 413 DFGIDDYYFRLSYRDPEDKE-------------KYVDNDEMWEKAQAMLKETMEDMNLEY 459 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y DV ++ +L +++ +S ++ F+ ++ T+ G D Sbjct: 460 VEAEGEAAFYGPKLDV---QVKTALGKDETLSTIQLD----FHLPERFD----LTYIGED 508 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 G H + G + + + + +P +AP ++ +I + Q D + Sbjct: 509 GNQHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVKIIPVSL--QAHLDYAK 564 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 I +L G V D+ E+IG + A P +++G K + + V + Sbjct: 565 DIEEKLRYQGVRVELDERDEKIGYKIREAQTQKVPFALVLGDKEMESNSVNYRRYGEQDT 624 Query: 427 EDMSLEEVINYASHRFSNNR 446 E + ++ +N N + Sbjct: 625 ETLEFDQFLNLIKEEVDNKK 644 >gi|223932680|ref|ZP_03624679.1| threonyl-tRNA synthetase [Streptococcus suis 89/1591] gi|223898650|gb|EEF65012.1| threonyl-tRNA synthetase [Streptococcus suis 89/1591] Length = 650 Score = 257 bits (657), Expect = 3e-66, Method: Composition-based stats. Identities = 90/449 (20%), Positives = 177/449 (39%), Gaps = 38/449 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KAYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRTLERYITDKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + ++++H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWDHYHEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKNH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP ++ + R E G+ R RE + D + F TPE + + K Sbjct: 347 VRSYRELPVRIAELGMMHRYEKSGALTGLQRVREMTLNDGHIFV-TPEQIQEEFKKALQL 405 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSENTDF 239 + ++ L R D + + + + + + Sbjct: 406 IIDVYADFNLNDYRFRLS--------------YRDPEDKEKYYDNDEMWENAQRMLKGAM 451 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 452 DEMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERF----G 500 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 T+ GADG++H M G+ + I + +P +AP ++++I I + Sbjct: 501 LTYIGADGEEHRPVMIHRGVISTMERFTAILI--ETYKGAFPTWLAPTQVTMIPISV--E 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D K+ L G V D+ E++ + + P Q+IVG K + D+ V ++ Sbjct: 557 AHLDYAWKVAKELQDRGVRVHVDERNEKMQYKIRQSQTSKIPYQLIVGDKEMEDNAVNVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRF-SNNRP 447 + + S+ E +++ +RP Sbjct: 617 RYGSKATQTQSVSEFVDHILADIARKSRP 645 >gi|107102275|ref|ZP_01366193.1| hypothetical protein PaerPA_01003332 [Pseudomonas aeruginosa PACS2] Length = 621 Score = 257 bits (657), Expect = 3e-66, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + + G+ W P G + +R+ Q G Sbjct: 212 YIQRIEEAEKRDHRRIGKQLDLF--HLQEEAPGMVFWHPNGWSVYQVLEQYMRKVQRDHG 269 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + P + IF +KSY Sbjct: 270 YVEVRTPQVVDRILWERSGHWSNYAENMFT-TSSESRDYAVKPMNCPCHVQIFNQGLKSY 328 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + K + L++ Sbjct: 329 RDLPLRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQVKKEA-ADFIKLTLQV 387 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I M+ + P S E D + ++ Sbjct: 388 YRDFGFTDIAMKLSTRPAKRVGSDE-----------------LWDRAEGALADALNESGL 430 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L N + + + A++ Sbjct: 431 AWEYQPGEGAFYGPKIEF---TLKDCLGRNWQCGTLQYDPNLP--------ERLDASYIA 479 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ + +P +AP + ++NI D Sbjct: 480 EDNNRKRPVMLHRAILGSFERFIGMLI---EHYAGAFPAWLAPTQAVVMNITDK---QAD 533 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L + G D E+IG + LL P +++G + V V ++ R Sbjct: 534 FAAEVVRILGESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVESKAVAVRTREG 593 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + + + S Sbjct: 594 EDLGSMPVTQFAELLAQAVSRR 615 >gi|159903594|ref|YP_001550938.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211] gi|238687108|sp|A9BAX2|SYT_PROM4 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|159888770|gb|ABX08984.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211] Length = 638 Score = 257 bits (657), Expect = 3e-66, Method: Composition-based stats. Identities = 83/442 (18%), Positives = 150/442 (33%), Gaps = 41/442 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K ++ L+E RD K+ L + + G+ W P G + IR+ N Sbjct: 229 KAYINRLEEAEKRDHRKIGKKMDLF--HTQEEAPGMVFWHPNGWSIYQVLEKYIRDVLNN 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P LW +SG +D + +M ++ P + IF +K Sbjct: 287 NYYQEVKTPQAVDRSLWEKSGHWDKFKDDMFTTT-SENREYAIKPMNCPCHIQIFNQGLK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F+ DA+ F T + + Sbjct: 346 SYRDLPIRLAEFGSCHRNEPSGALHGLMRVRNFVQDDAHIFC-TEAQVQSEVSNFIDLVF 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G I ++ + P S+ D + + + Sbjct: 405 EVYKSFGFNEIIIKLSTRPKKR-----------------VGSEFIWDKSEKALSEALNSK 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 S + A Y + L D L + ++ A + Sbjct: 448 GLDWSYLPGEGAFYGPKIEF---SLKDCLNRVWQCGTIQVDFSMPSRL--------EAKY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G+ + +G+ ++ + +P +AP +I ++ I + C Sbjct: 497 IDEKGEKKEPVMLHRAILGSFERFIGILI---ENYAGNFPVWLAPVQIIVMGITDRNSSC 553 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 CE + +L G V D E+IG + L P +I+G K + K+ ++ R Sbjct: 554 ---CESLTTKLINKGYRVKLDLRNEKIGFKIREHTLNRIPYLLIIGDKEEKEGKIAVRTR 610 Query: 422 LTGIREDMSLEEVINYASHRFS 443 +SLEE + + S Sbjct: 611 EGNDMGSISLEEFLVILNKSIS 632 >gi|117621181|ref|YP_856850.1| threonyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166223316|sp|A0KKP9|SYT_AERHH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|117562588|gb|ABK39536.1| threonyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 642 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 83/447 (18%), Positives = 151/447 (33%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E RD +L L + + + G+ W G + IR + Sbjct: 227 KQLKSYLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELETFIRGK 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 E+ P + LW SG ++ Y + M ++ P + IF Sbjct: 285 LKEYDYQEVKGPFMMDRVLWERSGHWEKYAQAMFT-TQSENREYAIKPMNCPGHVQIFNQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F + + + + Sbjct: 344 GLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIMEEVSACIRM 403 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y G ++I ++ + P S E D + Sbjct: 404 VYDVYGT-FGFENIVVKLSTRPEQRIGSDE-----------------AWDRAEAALAEAL 445 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + A Y + L D L + ++ G Sbjct: 446 VLNGLKYDLQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFALPGRLG-------- 494 Query: 300 ATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 AT+ G D + H V + +G++ ++ + ++P +AP + ++NI + Sbjct: 495 ATYVGEDNERHVPVMIHRAILGSLERFIGILT---EEYAGLFPTWLAPTQAVVMNITDN- 550 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D K+ L+ G D E+IG + L P ++ G K V K+ + Sbjct: 551 --QADYAVKVAKALNDAGLRAKADLRNEKIGFKIREHTLKRVPFMLVCGDKEVEAGKIAV 608 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R +EE+I + Sbjct: 609 RTRKGADLGTYPVEELIALLTQEVQTR 635 >gi|77458158|ref|YP_347663.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1] gi|123758422|sp|Q3KEY2|SYT_PSEPF RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|77382161|gb|ABA73674.1| putative threonyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1] Length = 640 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 147/445 (33%), Gaps = 41/445 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRKIGKRLGLF--HTQEEAPGMVFWHPNGWTLYQVLEQYMRKVQRDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG + +Y M + + P + +F +KSY Sbjct: 289 YLEIKTPQVVDRSLWEKSGHWANYADNMFT-TESESRDYAIKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+E G+MR R F DA+ F + S + + Sbjct: 348 RELPMRLAEFGACHRNEPSGALHGIMRVRAFTQDDAHIFCTEEQMQAES-AAFIKLTMDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + M+ + P S E D + D Sbjct: 407 YRDFGFTDVEMKLSTRPEKRVGSDE-----------------LWDRAEAALAAALDSAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ G A + Sbjct: 450 PYDLQPGEGAFYGPKIEF---SLKDCLGRVWQCGTLQLDFNLPVRLG--------AEYVS 498 Query: 305 ADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + H V + +G+ ++ ++ +P +AP + ++NI D Sbjct: 499 EDNSRKHPVMLHRAILGSFERFVGILIEHYE---GAFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L++ G D E+IG + LL P +++G K V V ++ R Sbjct: 553 FVVQVEKTLNESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDKEVEMQTVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN-RP 447 M + + + + S RP Sbjct: 613 ADLGSMPVAQFAEFLAQAVSRRGRP 637 >gi|319651798|ref|ZP_08005923.1| threonyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] gi|317396450|gb|EFV77163.1| threonyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] Length = 643 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 82/438 (18%), Positives = 169/438 (38%), Gaps = 32/438 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L + +G+ WLP G N+ I +++ R G Sbjct: 235 LRLLEEAKERDHRKIGKELNLFMN-SQKVGQGLPMWLPKGATIRRNIERYIVDKEERLGY 293 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P + S DL+ SG +D Y ++M + + +++ ++ P + I+++ I SYR Sbjct: 294 DHVYTPIMGSVDLYKTSGHWDHYQEDMFPVMEMDNEQLVLRPMNCPHHMMIYKNGIHSYR 353 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K + ++ L ++ Sbjct: 354 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEEFKRVVHLILEVYK 413 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIISL 245 + R D +T+ + D M + D+I Sbjct: 414 DFDINDYSFRLS--------------YRDPQDTEKYFDDDEMWEKAQAMLKEAMDEIGLD 459 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y DV ++ +L +++ +S ++ F ++ T+ Sbjct: 460 YFEAEGEAAFYGPKLDV---QVKTALGKDETLSTVQLD----FLLPERFD----LTYVAE 508 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DGK H + G + + + + +P +AP ++ +I + + D Sbjct: 509 DGKPHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVQVIPVSP--DIHFDYA 564 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +++ +L G V DD E+IG + A + P ++VG V++ V ++ Sbjct: 565 KQVREQLQAEGFRVELDDRNEKIGYKIREAQMQKTPYMLVVGDNEVAEKAVNVRKYGEQK 624 Query: 426 REDMSLEEVINYASHRFS 443 E +S E+ I+ Sbjct: 625 SETVSFEDFISALKAEVK 642 >gi|257095791|ref|YP_003169432.1| threonyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048315|gb|ACV37503.1| threonyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 641 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 73/443 (16%), Positives = 143/443 (32%), Gaps = 40/443 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K +L L+E RD +L L + G W P G + +R Sbjct: 226 KALKAYLTRLEEAGKRDHRKLGAQLDLF--HFDDCAPGSVFWHPKGWALFQQLIGYMRTR 283 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R +E++ P + LW SG + +Y + M +++ P + +F Sbjct: 284 QERADYVEVNTPDVMDRGLWETSGHWFNYREAMFTTTTEDERVFALKPMNCPGAVSLFAQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R E G++R R F DA+ F + Sbjct: 344 RLKSYRDLPLRMAEFGKVHRYEPSGSLHGLLRVRHFTQDDAHIFCTAAQMQDEC-ASTIA 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 I+ G + ++ + P S E D + + Sbjct: 403 LVFAIYRDFGFDDVAVKLSTRPANRIGSDE-----------------TWDQLEGALSGAL 445 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D + I A Y + L D++ + + +++ Sbjct: 446 DRMGIECRINPGEGAFYGPKLEF---VLRDAIGRDWQCGTLQVDLNLP--------ERFD 494 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 ++ G+ + G++ ++ + G +W +++ Sbjct: 495 ISYINERGERERPVMLHRALFGSLERFTGILIEHYSGLFPLWLAPQQAVVLNI------S 548 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + D + + L +VG D E+IG + L P ++VG ++ +V + Sbjct: 549 EGQSDYAKSVLQALKRVGVRATVDLRNEKIGYKIREYSLQKVPYLLVVGDMEKAEGRVAL 608 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + R + L +VI Sbjct: 609 RARAGEDLGSLPLADVIARLREE 631 >gi|157145991|ref|YP_001453310.1| threonyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895] gi|157083196|gb|ABV12874.1| hypothetical protein CKO_01745 [Citrobacter koseri ATCC BAA-895] Length = 622 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 74/442 (16%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 212 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 269 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y M ++ P + IF +KSY Sbjct: 270 YQEVKGPFMMDRVLWEKTGHWENYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 328 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 329 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDE-VNACIRMVYDM 387 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 388 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 430 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ ++A++ G Sbjct: 431 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSR----LNASYVG 479 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + V + +G+M ++ G W V +++ + Sbjct: 480 ENNERQVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNIT------DTQSE 533 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 534 YVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 593 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + EVI + Sbjct: 594 KDLGSLDVNEVIEKLQQEIRSR 615 >gi|307702092|ref|ZP_07639099.1| threonyl-tRNA synthetase [Streptococcus mitis NCTC 12261] gi|307707425|ref|ZP_07643907.1| threonyl-tRNA synthetase [Streptococcus mitis NCTC 12261] gi|307616377|gb|EFN95568.1| threonyl-tRNA synthetase [Streptococcus mitis NCTC 12261] gi|307616579|gb|EFN95769.1| threonyl-tRNA synthetase [Streptococcus mitis NCTC 12261] Length = 647 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 77/444 (17%), Positives = 158/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KSYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVDKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYEDFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QVKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + + + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +S+++ + +N Sbjct: 619 GQKETQTVSVDDFVQAILADIANK 642 >gi|160871539|ref|ZP_02061671.1| threonyl-tRNA synthetase [Rickettsiella grylli] gi|159120338|gb|EDP45676.1| threonyl-tRNA synthetase [Rickettsiella grylli] Length = 642 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 79/439 (17%), Positives = 144/439 (32%), Gaps = 42/439 (9%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L + + + G+ W P G + IR + Sbjct: 232 LYLLKEAEKRDHRKLGKQLDLF--HVQEEAPGMVFWHPRGWTVYQRIEQYIRSCLKKAAY 289 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P L + LW +SG +D + KEM + P IF IKSYR Sbjct: 290 QEIQTPQLLARQLWEKSGHWDKFFKEMFT-TVTENTEFAIKPMSCPGHIQIFNQGIKSYR 348 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G++R R F+ D + F + + ++ Sbjct: 349 DLPLRLAEFGSCHRNEPSGALHGLLRVRGFVQDDGHIFCTEDQIQSE-VSAFIDLLYNVY 407 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G + ++ + P S D + D L Sbjct: 408 ADFGFNDVILKLATRPEAR-----------------VGSNASWDKAEKALALALDARKGL 450 Query: 246 NS-IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L DSL + ++ G A + Sbjct: 451 EWTYAHGEGAFYGPKIEF---SLKDSLNRIWQCGTLQVDFSMPQRLG--------AEYVN 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 G+ H V + +G++ ++ + +P +AP +I ++ I Sbjct: 500 ERGERHVPVMLHRAILGSIERFIGILI---EHYAGHFPLWLAPTQIVIMTITDK---QHH 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++I L + V D E+I + L P Q+++G + V+ +V ++ + Sbjct: 554 YAKEIAQELEALALRVKLDLRNEKISFKIREHSLQKIPYQLVIGDQEVASKQVTVRRQTG 613 Query: 424 GIREDMSLEEVINYASHRF 442 MS+ + Sbjct: 614 DSLGSMSVPKFYKEIRQAI 632 >gi|325497120|gb|EGC94979.1| threonyl-tRNA synthetase [Escherichia fergusonii ECD227] Length = 652 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 78/442 (17%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 242 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYQ 299 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y M ++ P + IF +KSY Sbjct: 300 YQEVKGPFMMDRVLWEKTGHWENYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 358 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 359 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNGCIRLVYDM 417 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 418 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 460 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 461 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 509 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ + Sbjct: 510 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT------DSQSE 563 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +LS G V D E+IG + L P ++ G K V KV ++ R Sbjct: 564 YVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 623 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 624 KDLGSMDVNEVIEKLQQEIRSR 645 >gi|254993456|ref|ZP_05275646.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J2-064] Length = 445 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 166/441 (37%), Gaps = 32/441 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 F+ + +E RD +L L I + +G+ WLP G + I +++ R G Sbjct: 35 FIQMQKEAKERDHRKLGKELDLFANSI-EVGQGLPLWLPKGATIRRVIERYIVDKEERLG 93 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + + +L+ SG +D Y ++M +++ ++ P + I+++ I SY Sbjct: 94 YNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHSY 153 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 R LP ++ + R E+ ++ + + + P+ K + ++ L ++ Sbjct: 154 RELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVY 213 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIIS 244 +K R D T+ + D M + + D++ Sbjct: 214 KDFDIKDYSFRLS--------------YRDPKNTEKYFDDDAMWEKAQAMLKSAMDEMEM 259 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ ++ + + +S ++ F ++ T+ G Sbjct: 260 DYFEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LTYIG 308 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H + G + + + + +P +AP ++ LI + A D Sbjct: 309 EDGEKHRPVVIHR--GVVSTMERFVAYLIEEYKGAFPTWLAPVQMELIPVNA--DAHLDY 364 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + +L + G DD E++G + A P +++G + V V ++ + Sbjct: 365 AKGVQDKLQRAGLRAEVDDRNEKLGYKIREAQTKKIPYALVLGDQEVEAGSVNVRRYGSK 424 Query: 425 IREDMSLEEVINYASHRFSNN 445 E M L+ I S Sbjct: 425 DSETMDLDAFIAQVVAEVSKY 445 >gi|304397616|ref|ZP_07379493.1| threonyl-tRNA synthetase [Pantoea sp. aB] gi|304354788|gb|EFM19158.1| threonyl-tRNA synthetase [Pantoea sp. aB] Length = 642 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 71/442 (16%), Positives = 138/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y + M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYKEAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHVFCTEEQVRDE-VNSCIRMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P + E D ++ Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGTDE-----------------MWDRAEEDLAAALNENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F + AT+ G Sbjct: 451 EFEFQPGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLP----KRLEATYVG 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + +G+M ++ G W + +++ + Sbjct: 500 ENNDRQTPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPLQVVVMNIT------DGQAE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E + +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVESLTRKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M ++ + + Sbjct: 614 KDLGSMDVDVFVAKLQQEVRSR 635 >gi|255320853|ref|ZP_05362027.1| threonyl-tRNA synthetase [Acinetobacter radioresistens SK82] gi|262380254|ref|ZP_06073409.1| threonyl-tRNA synthetase [Acinetobacter radioresistens SH164] gi|255302022|gb|EET81265.1| threonyl-tRNA synthetase [Acinetobacter radioresistens SK82] gi|262298448|gb|EEY86362.1| threonyl-tRNA synthetase [Acinetobacter radioresistens SH164] Length = 640 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD L L + + + G+ W P G + +R+ Q G Sbjct: 231 YIKRIEEAEKRDHRKIGKALDLF--HMQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG +Y M + P + +F +KSY Sbjct: 289 YLEIKTPQIVDFTLWEKSGHAANYADNMFT-THSESRNYAVKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + L + Sbjct: 348 RDLPIRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGPE-VADFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + M+ + P D S D Sbjct: 407 YKDFGFEDVQMKLSTRPEKR-----------------VGDDALWDMAEKSLADALDAAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + + F + + A+F Sbjct: 450 EWELQPGEGAFYGPKIEF---SLKDCLGRVWQCGTIQCD----FNLPER----LDASFVT 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + + +G+ ++ + P +AP + ++NI Sbjct: 499 EDNERDQPVMLHRAILGSFERFIGILI---EHYAGFMPPWLAPVQACVMNITDS---QAQ 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ACE++ A+L + G D E+IG + L P +++G + V + V ++ R Sbjct: 553 ACEQVVAKLKENGIRAISDLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS++ + + Sbjct: 613 KNLGTMSIDAFNDLVKVAVAER 634 >gi|195937403|ref|ZP_03082785.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024] gi|261227789|ref|ZP_05942070.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000] gi|261258046|ref|ZP_05950579.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966] gi|320641567|gb|EFX10955.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101] gi|320646926|gb|EFX15759.1| threonyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89] gi|320668281|gb|EFX35108.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61] Length = 622 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 78/442 (17%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 212 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 269 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 270 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 328 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 329 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNGCIRLVYDM 387 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 388 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNI 430 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 431 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 479 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ + Sbjct: 480 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT------DSQSE 533 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +LS G V D E+IG + L P ++ G K V K+ ++ R Sbjct: 534 YVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTRRG 593 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI + Sbjct: 594 KDLGSMDVNEVIEKLQQEIRSR 615 >gi|21231898|ref|NP_637815.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767974|ref|YP_242736.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. 8004] gi|188991100|ref|YP_001903110.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. B100] gi|25453287|sp|Q8P7Z2|SYT_XANCP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|81306049|sp|Q4UW57|SYT_XANC8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|229558465|sp|B0RRG9|SYT_XANCB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|21113622|gb|AAM41739.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573306|gb|AAY48716.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. 8004] gi|167732860|emb|CAP51054.1| unnamed protein product [Xanthomonas campestris pv. campestris] Length = 636 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 73/438 (16%), Positives = 137/438 (31%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + + RD L + + + G+ W P G V +R+ +G Sbjct: 234 YILRMEEADKRDHRKIGKAQDLF--HLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSG 291 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D+Y M + + P + +F + SY Sbjct: 292 YGEVRCPQILDVSLWQKSGHWDNYQDAMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSY 350 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F L + L + Sbjct: 351 RDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCL-ESQIEAEVTAFHQQALAV 409 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P D + + Sbjct: 410 YTAFGFDDIQIKIALRPEKR-----------------LGDDATWDKAEAALRSALGVCGV 452 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + H L D++ ++ ++ G A + Sbjct: 453 EWQELPGEGAFYGPKIEYH---LKDAIGRTWQLGTMQVDFMMPGRLG--------AEYVD 501 Query: 305 AD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 K H V + +G+M ++ H G W V ++ + Sbjct: 502 EHSQKKHPVMLHRAIVGSMERFIGILIEHHAGAFPAWLAPVQVVVANIT------DAQAE 555 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L+ G V D E+IG + L P ++VG + + V ++ R Sbjct: 556 YVDSVRKTLANQGFRVSADLRNEKIGYKIREHTLQRVPYLLVVGDREKENGAVAVRTRSG 615 Query: 424 GIREDMSLEEVINYASHR 441 M++ I Sbjct: 616 EDLGTMTVSAFIERLQAE 633 >gi|330720856|gb|EGG99050.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC2047] Length = 639 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 79/440 (17%), Positives = 136/440 (30%), Gaps = 42/440 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 KY + + + RD + KL L + + + G+ W G V +R+ Q+ Sbjct: 229 LKKYLNFLEEASKRDHRKLAKKLDLF--HLQEEAPGMVFWHAKGWSIYQTVEQYMRKVQH 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P L LW SG D +G EM + +K P + +F + Sbjct: 287 DNGYQEIKTPQLVDFSLWERSGHADKFGDEMF-SSHSENKDYAVKPMNCPCHVQVFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP + R+E G+MR R F+ DA+ F + Sbjct: 346 RSYRDLPLRLAEFGCCHRNEPSGTLQGLMRVRGFVQDDAHIFCA-ESQIQDEVASFIDLL 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G + ++ + P S E D + D+ Sbjct: 405 YSVYQDFGFDDVLVKLSTRPEKRVGSDE-----------------VWDKAEEALQLALDN 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y + L D L + ++ A Sbjct: 448 KGIAWELQPGEGAFYGPKIEF---SLRDCLGRVWQCGTIQVDFSMPGRLD--------AQ 496 Query: 302 FKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + DG M I R + +IE A Sbjct: 497 YVAEDGSRQVPVMLHRAILGSFERFIGILIEHFAGAFPAWLAPEQAAIVNIT-------D 549 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + C + L G VF D E+IG + + P ++VG K + ++ ++ Sbjct: 550 SQAEYCRNVEKTLRNKGFRVFSDLRNEKIGFKIREHSIQKIPYVLVVGDKEMEAGQIAVR 609 Query: 420 HRLTGIREDMSLEEVINYAS 439 + MS+E + Sbjct: 610 TQKGEDLGSMSIEAFCERLT 629 >gi|317047868|ref|YP_004115516.1| threonyl-tRNA synthetase [Pantoea sp. At-9b] gi|316949485|gb|ADU68960.1| threonyl-tRNA synthetase [Pantoea sp. At-9b] Length = 642 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 71/442 (16%), Positives = 138/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y + M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYKEAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQVRDE-VNSCIRMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P + E A+ + + Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGTDEMWDRAEVDLAEAL-----------------KENQI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ F + AT+ G Sbjct: 451 PFEYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLP----KRLDATYVG 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + +G+M ++ G W V +++ + Sbjct: 500 ENNDRQTPVMIHRAILGSMERFIGILTEEFAGFFPSWLAPVQAVVMNIT------DSQAE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVSELTKKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGEKEVEAGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M ++ + + Sbjct: 614 KDLGSMDVDVFVEKLQQEIRSR 635 >gi|228985474|ref|ZP_04145631.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774239|gb|EEM22648.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 639 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 74/444 (16%), Positives = 153/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TPE + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALANVLHSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + I + V Sbjct: 501 DEKNEKRRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHV 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 ++I +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYADEIADKLAQAGVRVERDVRDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E + L + N + Sbjct: 616 EEKSEVIELNGFVESIKEEIKNKK 639 >gi|145634324|ref|ZP_01790034.1| threonyl-tRNA synthetase [Haemophilus influenzae PittAA] gi|145268304|gb|EDK08298.1| threonyl-tRNA synthetase [Haemophilus influenzae PittAA] Length = 643 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 76/445 (17%), Positives = 146/445 (32%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LAEYLTRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + LW ++G + +Y +++ ++ P + IF + Sbjct: 287 QYDYQEVKGPFMMDRVLWEKTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G +I ++ + P S E A+ G Sbjct: 405 YDIYSTFGFTNIAVKLSTRPENRIGSDEMWDRAEAGLAAALVHN---------------- 448 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L D L + ++ AT Sbjct: 449 -GLEYEIQEGEGAFYGPKIEF---ALRDCLGREWQCGTVQLDFALPGRLD--------AT 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ +I + G W +++ Sbjct: 497 YVAEDNSRKTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPTQAVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ +LS VG V D E++G + L P ++ G K +++ KV ++ Sbjct: 551 QADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRVPYMLVCGDKEIAEGKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R ++EE ++ + Sbjct: 611 RKGADLGTFTVEEFAEILKNQVRSR 635 >gi|270261557|ref|ZP_06189830.1| threonyl-tRNA synthetase [Serratia odorifera 4Rx13] gi|270045041|gb|EFA18132.1| threonyl-tRNA synthetase [Serratia odorifera 4Rx13] Length = 642 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 73/442 (16%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + A +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N+ + Sbjct: 349 RDLPLRMGEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRAE-VNECIRMVYDV 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P + + A+ + Sbjct: 408 YGTFGFEKIAVKLSTRPEKRIGTDDMWTRAE-----------------EDLAAALTENGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ G A++ G Sbjct: 451 PFEYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFFLPGRLG--------ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+M ++ + G W V +++ D Sbjct: 500 ENNDRVVPVMIHRAILGSMERFIGILTEEYAGFYPTWIAPVQVVVMNIT------DSQSD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L + G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVQQLTKKLQEAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + EV++ + Sbjct: 614 KDLGSLDVNEVVDKLLKEIRSR 635 >gi|327463110|gb|EGF09431.1| threonine--tRNA ligase [Streptococcus sanguinis SK1] Length = 647 Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 152/445 (34%), Gaps = 32/445 (7%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 KY + RD +L L MI + +G+ WLP G + I +++ Sbjct: 228 LKKYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATVRRELERYIVDKE 285 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRS 120 +G + P L S +L+ SG ++ Y ++M D D + + P + +++ Sbjct: 286 LASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKH 345 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SYR LP +I + R E ++ + + +TPE + + + Sbjct: 346 HVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQL 405 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + ++ L R + D E + D Sbjct: 406 IIDVYADFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALD 452 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 453 EMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD----L 501 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + GADG++H M G+ + I + + + I ++ Sbjct: 502 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEA 557 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ +L G D+ E++ + + P Q+IVG K V D V ++ Sbjct: 558 HIDYAWQVAKKLRDKGVRADVDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVRR 617 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 + ++E + +N Sbjct: 618 YGQKETHTIPVDEFVEQILADIANK 642 >gi|229155963|ref|ZP_04284064.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 4342] gi|228627570|gb|EEK84296.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 4342] Length = 639 Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 74/444 (16%), Positives = 153/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TPE + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALANVLHSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + I + V Sbjct: 501 DEKNEKRRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHV 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 ++I +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYADEIADKLAQAGVRVERDVRDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E + L + N + Sbjct: 616 EEKSEVIELNGFVESIKEEIKNKK 639 >gi|34496803|ref|NP_901018.1| threonyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472] gi|73919781|sp|Q7NYC6|SYT_CHRVO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|34102658|gb|AAQ59023.1| threonyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472] Length = 633 Score = 256 bits (655), Expect = 4e-66, Method: Composition-based stats. Identities = 84/438 (19%), Positives = 158/438 (36%), Gaps = 40/438 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + G+ W P G + NV +R + N G Sbjct: 231 YLYMLEEAEKRDHRKLGVQLDLF--HLQDEAPGMVFWHPKGWQLWQNVEQYMRAKLNHEG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + A+LW SG +Y + M + + + P + IF S ++SY Sbjct: 289 YKEVRTPMMMDANLWERSGHAANYRENMF-ITESEKRDYAVKPMNCPGHVQIFNSGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ D + F + ++ + + + Sbjct: 348 RDLPLRYAEFGSCHRNEPSGALHGIMRVRGFVQDDGHIFCTEDQINQEA-KDFHRLVMEV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + R G + ++ P A+ G + + +P E Sbjct: 407 YDRFGFDKVAIKLALRPEKRIGEESTWDKAEEGMREALRACGVEWEELPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + ++ F + A Sbjct: 458 --------GAFYGPKIEYH---IKDALGRSWQCGTLQLD----FMLPERLDAEYVA---D 499 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + + V + +G++ ++ +H G +W V +++ + + Sbjct: 500 DNSRKRPVMLHRAALGSLERFLGILIENHAGAFPLWLAPVQMVVMNIT------EAQAEY 553 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +I L K G V D E+IG + L P Q+IVG K +D V ++ R Sbjct: 554 AAEIAKELEKQGFRVELDLRNEKIGYKIREHSLQKLPYQIIVGDKEKADGLVAVRARGE- 612 Query: 425 IREDMSLEEVINYASHRF 442 ++LE Sbjct: 613 DLGQLTLEAFAARLKAEM 630 >gi|42781481|ref|NP_978728.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 10987] gi|42737404|gb|AAS41336.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 10987] Length = 640 Score = 256 bits (655), Expect = 4e-66, Method: Composition-based stats. Identities = 72/443 (16%), Positives = 156/443 (35%), Gaps = 40/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + +LW +SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 KYQEVRTPFMMNQELWEKSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TPE + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G + + + P + + + Sbjct: 410 VYKTFGFQYE-VELSTRPEDS-----------------MGDDKLWEQAESALANVLHSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + I + V Sbjct: 501 DEKNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHV 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++ +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYADEVADKLAQAGVRVERDVRDEKLGYKIREAQMQKIPYVLVIGDKELENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 E ++L+ ++ N Sbjct: 616 GEKSEVVALDVFVSSIEEEIKNR 638 >gi|253700848|ref|YP_003022037.1| threonyl-tRNA synthetase [Geobacter sp. M21] gi|259516486|sp|C6DYJ5|SYT_GEOSM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|251775698|gb|ACT18279.1| threonyl-tRNA synthetase [Geobacter sp. M21] Length = 636 Score = 256 bits (655), Expect = 4e-66, Method: Composition-based stats. Identities = 85/443 (19%), Positives = 154/443 (34%), Gaps = 40/443 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + R+E + G Sbjct: 232 YLARIEEAKKRDHRKLGRELDLFS-FNDEVGAGLVIWHPKGAMLRTILEDFERKEHLKRG 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +LW SG Y++Y + M ++++ P + I+RS ++SY Sbjct: 291 YDIVLGPQILKTELWQRSGHYENYRENM-YFTTVDEQSYGVKPMNCLAHMMIYRSQLRSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++++ R E G++R R F DA+ TP+ + + Sbjct: 350 RDLPLRYFELGTVHRHERAGVLHGLLRVRGFTQDDAHILC-TPDQLDAEIKGVIQFVTEV 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G EF + T + S D + + D Sbjct: 409 MGIFG------------------FEFEMELSTRPEKSIGSDDAWELATSALLNALKDSGR 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ KL D+L + + + F ++ T+ Sbjct: 451 PYEINEGDGAFYGPKIDI---KLRDALDRRWQCATIQCD----FTLPERFD----LTYVD 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ + +GA+ V+ G W V +++ Sbjct: 500 ADGEKKRPVMVHRVILGAIERFIGVLIEHFAGNFPTWLAPVQATIVTVT------DNQIP 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + +L G V D E++G + A L P ++VG K V + + R Sbjct: 554 YAQAAFDKLRAAGIRVQKDFRNEKLGFKIREAQLQKIPYMLVVGDKEVESGMLAPRFRDG 613 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 E M+ E+ I + + + + Sbjct: 614 KNLESMTPEQFITFIENEVKSYK 636 >gi|251792477|ref|YP_003007203.1| threonyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700] gi|247533870|gb|ACS97116.1| threonyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700] Length = 643 Score = 256 bits (655), Expect = 4e-66, Method: Composition-based stats. Identities = 71/442 (16%), Positives = 140/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD L L + + + G+ W G + +R + + Sbjct: 232 YLQRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYD 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G + +Y +++ ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWQNY-GDLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F T + + I Sbjct: 349 RDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIRMVYDI 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G +I ++ + P + D D Sbjct: 408 YSTFGFTNIFVKLSTRPEKR-----------------IGADDMWDCAEEGLANALKHNGL 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y + L D L + ++ +A++ Sbjct: 451 EYEIQEGEGAFYGPKIEF---ALRDCLDREWQCGTIQLDFALPGRL--------NASYVA 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G++ +I + G W +++ + Sbjct: 500 EDNDRRTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPTQAVVMNIT------DSQSE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + +LS G V D E++G + L P ++ G K + KV ++ R Sbjct: 554 YVQDVAKKLSDAGLRVKTDLRNEKVGFKIREHTLRRVPYMLVCGDKEIETGKVAVRTRKG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 ++EE ++ + N Sbjct: 614 QDLGTFTVEEFLDVLKKQVRNR 635 >gi|139437031|ref|ZP_01771191.1| Hypothetical protein COLAER_00165 [Collinsella aerofaciens ATCC 25986] gi|133776678|gb|EBA40498.1| Hypothetical protein COLAER_00165 [Collinsella aerofaciens ATCC 25986] Length = 611 Score = 256 bits (655), Expect = 4e-66, Method: Composition-based stats. Identities = 91/442 (20%), Positives = 156/442 (35%), Gaps = 44/442 (9%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + +L+E RD ++ L M+ + G +LP G + + RE ++ G Sbjct: 209 MHMLEEAKKRDHRKIGREMDLF--MMRDEAPGFPFFLPNGMILKNTLLDYWREIHHKAGY 266 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 +E+S P + + LW SG +D Y M +D+ P + ++ S SYR Sbjct: 267 VEISTPLIMNKQLWKTSGHWDHYKDNM-YSTVIDDEEYCIKPMNCPGGVLVYASKPHSYR 325 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP +I L R ELR G+ R R F DA+ F + + + ++ Sbjct: 326 ELPIRAGEIGLVHRHELRGALHGLFRVRCFNQDDAHLFVRPDQLTDEIV-GVVNLIDSVY 384 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + G K + + P S E A+ G T + + Sbjct: 385 QKFGFKY-HVELSTRPEDSMGSDEDWARAEEG-----------------LRTALEQLHMD 426 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + E A Y D H E DSL + ++ F + A Sbjct: 427 YEVNEGDGAFYGPKIDFHLE---DSLGRTWQCGTVQLDFQMPLNFD--------LEYVDA 475 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG + G++ ++ GK W V + + + RD Sbjct: 476 DGTKKRPIMLHRVCFGSIERFIGILIEHFAGKFPTWLAPVQVKALPV------SEKSRDY 529 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL-GFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ A+L + G V DD E+IG + A + P +I+G K V + ++ R + Sbjct: 530 AHEVCAKLEEAGIRVVCDDRDEKIGYKIREARSIDRVPYMLILGEKEVEAGNISVRDR-S 588 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS++E + Sbjct: 589 NETVQMSVDEFVAKVLEEIKTR 610 >gi|65319684|ref|ZP_00392643.1| COG0441: Threonyl-tRNA synthetase [Bacillus anthracis str. A2012] Length = 485 Score = 256 bits (655), Expect = 4e-66, Method: Composition-based stats. Identities = 72/444 (16%), Positives = 156/444 (35%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ ++L L M + + G+ +LP GQ + + A +RE Q Sbjct: 80 EYLHFVEEAAKRNHRKLGNELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 137 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 138 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 196 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TPE + + Sbjct: 197 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMAQIDY 255 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G + + + P E + S + Sbjct: 256 VYKTFGFEYE-VELSTRPEDSMGDDE-----------------LWEQAEASLENVLQSLN 297 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 298 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 346 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + I + V Sbjct: 347 DEKNEKRRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHV 401 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++ +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 402 QYADEVADKLAQAGVRVERDMRDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYG 461 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 + L+ + +N + Sbjct: 462 EEKSGVIELDMFVESMKEEINNRK 485 >gi|229196601|ref|ZP_04323345.1| Threonyl-tRNA synthetase [Bacillus cereus m1293] gi|228586957|gb|EEK45031.1| Threonyl-tRNA synthetase [Bacillus cereus m1293] Length = 639 Score = 256 bits (655), Expect = 4e-66, Method: Composition-based stats. Identities = 74/444 (16%), Positives = 154/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TPE + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALANVLHSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 CKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + I + V Sbjct: 501 DEKNEKRRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHV 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 ++I +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYADEIVDKLAQAGVRVERDVRDEKLGYKIREAQMQKIPYVLVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E + L + +N + Sbjct: 616 EEKSEVVELNGFVESMKEEINNRK 639 >gi|222095974|ref|YP_002530031.1| threonyl-tRNA synthetase [Bacillus cereus Q1] gi|221240032|gb|ACM12742.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus cereus Q1] Length = 639 Score = 256 bits (655), Expect = 4e-66, Method: Composition-based stats. Identities = 74/444 (16%), Positives = 154/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TPE + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALANVLHSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + I + V Sbjct: 501 DEKNEKRRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKIIPVSNAVHV 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 ++I +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYADEIADKLAQAGVRVERDVRDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E + L + +N + Sbjct: 616 EEKSEVVELNGFVESMKEEINNRK 639 >gi|157370384|ref|YP_001478373.1| threonyl-tRNA synthetase [Serratia proteamaculans 568] gi|166987325|sp|A8GDQ5|SYT_SERP5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157322148|gb|ABV41245.1| threonyl-tRNA synthetase [Serratia proteamaculans 568] Length = 642 Score = 256 bits (655), Expect = 4e-66, Method: Composition-based stats. Identities = 73/442 (16%), Positives = 141/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + A +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N+ + Sbjct: 349 RDLPLRMGEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRAE-VNECIRMVYDV 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ + P + + A+ + Sbjct: 408 YGTFGFDKIAVKLSTRPEKRIGTDDMWTRAE-----------------EDLAAALTENGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ G A++ G Sbjct: 451 PFEYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFFLPGRLG--------ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+M ++ + G W V +++ D Sbjct: 500 ENNDRVVPVMIHRAILGSMERFIGILTEEYAGFYPTWIAPVQVVVMNIT------DSQSD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVQQLTKKLQDAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + EV++ + Sbjct: 614 KDLGSLDVNEVVDKLLKEIRSR 635 >gi|325919878|ref|ZP_08181868.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865] gi|325549662|gb|EGD20526.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865] Length = 634 Score = 256 bits (655), Expect = 4e-66, Method: Composition-based stats. Identities = 73/438 (16%), Positives = 138/438 (31%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + + RD + L + + + G+ W P G V +R+ +G Sbjct: 232 YILRMEEADKRDHRRIGKQQDLF--HLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D+Y M + + P + +F + SY Sbjct: 290 YGEVRCPQILDVSLWQKSGHWDNYQDAMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F L + L + Sbjct: 349 RDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCL-ESQIEAEVTAFHQQALAV 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P D + + Sbjct: 408 YTAFGFDDIEIKIALRPEKR-----------------LGDDVTWDKAEAALRSALGVCGV 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + H L D++ ++ ++ G A + Sbjct: 451 EWQELPGEGAFYGPKIEYH---LKDAIGRTWQLGTMQVDFMMPGRLG--------AEYVD 499 Query: 305 AD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 K H V + +G+M ++ H G W V ++ D Sbjct: 500 EHSQKKHPVMLHRAIVGSMERFIGILIEHHAGAFPSWLAPVQVVVANIT------DAQAD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L+ G V D E+IG + L P ++VG + + V ++ R Sbjct: 554 YVDSVRKTLANQGFRVNADLRNEKIGYKIREHTLQRVPYLLVVGDREKENGAVAVRTRSG 613 Query: 424 GIREDMSLEEVINYASHR 441 M++ + Sbjct: 614 EDLGTMTVSAFVERLQAE 631 >gi|262044121|ref|ZP_06017196.1| threonine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259038520|gb|EEW39716.1| threonine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 622 Score = 256 bits (655), Expect = 4e-66, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 139/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 212 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQ 269 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 270 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 328 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 329 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQVRDE-VNACIRMVYDM 387 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 388 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------TWDRAEADLAVALEENNI 430 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F + S A + G Sbjct: 431 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPQRLS----AFYVG 479 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + V + +G++ ++ G W V +++ + Sbjct: 480 ENNERQVPVMIHRAILGSLERFIGILTEEFAGFFPTWIAPVQVVVMNIT------DSQAE 533 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 534 YVNELTRKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 593 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M EVI + Sbjct: 594 KDLGSMDENEVIEKLQQEIRSR 615 >gi|229091361|ref|ZP_04222576.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-42] gi|228691990|gb|EEL45732.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-42] Length = 639 Score = 256 bits (655), Expect = 4e-66, Method: Composition-based stats. Identities = 74/444 (16%), Positives = 155/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ ++L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGNELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TPE + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + S + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEASLENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + I + V Sbjct: 501 DEKNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPTWVA-----PVQVKVIPVSNAVHV 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++ +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYADEVADKLAQAGVRVERDMRDEKLGYKIREAQMQKIPYVLVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E + L + +N + Sbjct: 616 EEKSEVVELNGFVESMKEEINNRK 639 >gi|58582810|ref|YP_201826.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331] gi|58427404|gb|AAW76441.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 671 Score = 256 bits (655), Expect = 4e-66, Method: Composition-based stats. Identities = 74/438 (16%), Positives = 138/438 (31%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + + RD L + + + G+ W P G V +R+ +G Sbjct: 269 YILRMEEADKRDHRRIGKAQDLF--HLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSG 326 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D+Y M + + P + +F + SY Sbjct: 327 YGEVRCPQILDVSLWQKSGHWDNYQDAMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSY 385 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F L + L + Sbjct: 386 RDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCL-ESQIESEVTAFHQQALAV 444 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P D + + Sbjct: 445 YTAFGFDDIQIKIALRPEKR-----------------LGDDATWDKAEAALRSALGVCGV 487 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + H L D++ ++ ++ G A + Sbjct: 488 EWQELPGEGAFYGPKIEYH---LKDAIGRTWQLGTMQVDFMMPGRLG--------AEYVD 536 Query: 305 AD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + K H V + +G+M ++ H G W V ++ D Sbjct: 537 ENSQKKHPVMLHRAIVGSMERFIGILIEHHAGAFPSWLAPVQVVVANIT------DAQAD 590 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L+ G V D E+IG + L P ++VG + + V ++ R Sbjct: 591 YVDAVRKTLANQGFRVSADLRNEKIGYKIREHTLQRVPYLLVVGDREKENGAVAVRTRSG 650 Query: 424 GIREDMSLEEVINYASHR 441 M++ I Sbjct: 651 EDLGTMTVSAFIERLQAE 668 >gi|327461002|gb|EGF07335.1| threonine--tRNA ligase [Streptococcus sanguinis SK1057] Length = 647 Score = 256 bits (655), Expect = 4e-66, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 152/445 (34%), Gaps = 32/445 (7%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 KY + RD +L L MI + +G+ WLP G + I +++ Sbjct: 228 LKKYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATVRRELERYIVDKE 285 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRS 120 +G + P L S +L+ SG ++ Y ++M D D + + P + +++ Sbjct: 286 LASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKH 345 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SYR LP +I + R E ++ + + +TPE + + + Sbjct: 346 HVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQL 405 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + ++ L R + D E + D Sbjct: 406 IIDVYADFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALD 452 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 453 EMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD----L 501 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + GADG++H M G+ + I + + + I ++ Sbjct: 502 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEA 557 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ +L G D+ E++ + + P Q+IVG K V D V ++ Sbjct: 558 HIDYAWQVAKKLRDKGVRADVDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVRR 617 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 + ++E + +N Sbjct: 618 YGQKETHTIPVDEFVEQILADIANK 642 >gi|224584156|ref|YP_002637954.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254783535|sp|C0Q647|SYT_SALPC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|224468683|gb|ACN46513.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 642 Score = 256 bits (655), Expect = 4e-66, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 141/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDE-VNACIRMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 408 YSPFGFEKIVVKLSTRPDKRIGSDE-----------------MWDRAEADLAVALEENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 451 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ Sbjct: 500 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNIT------DSQSG 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + +VI + Sbjct: 614 KDLGSLDVNDVIEKLQQEIRSR 635 >gi|331007295|ref|ZP_08330496.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC1989] gi|330418902|gb|EGG93367.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC1989] Length = 640 Score = 256 bits (655), Expect = 4e-66, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 133/445 (29%), Gaps = 43/445 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L L+E RD K + + + G+ W P G + +R+ Q Sbjct: 230 KAHLHFLEEAVKRDHRKLGKKFDYF--HMQEEAPGMVFWHPKGWSIYATIEEYMRKVQRD 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW SG +D + M + + + P + +F +K Sbjct: 288 NGYKEIKTPQVVDRSLWERSGHWDKFRDNMFTV-ESESRDYAIKPMNCPCHVQVFNQGLK 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY+ LP + R+E G+MR R F+ DA+ F + + Y Sbjct: 347 SYKELPLRLAEFGSCHRNEASGTLQGLMRVRGFVQDDAHIFCSEEAIQEEVSVFTDLLYK 406 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 G + +R + P + E D + D Sbjct: 407 VYA-DFGFSDVIIRLSTRPEQRVGTEE-----------------GWDKAEKALADALDAK 448 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + L D L + ++ A + Sbjct: 449 GLPWEELPGEGAFYGPKIEF---SLRDCLNRVWQCGTIQVDFSMPGRLD--------AQY 497 Query: 303 KGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 DG M I R + +IE N Sbjct: 498 VAEDGSRQVPVMLHRAILGSFERFIGILIEHYEGAFPTWLAPEQVAILNITDN------- 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + +K L G V D E+IG + L P +++G K V ++ + ++ Sbjct: 551 QSEYVQKTEKALRDKGFRVISDLRNEKIGFKIREHTLQRIPYLLVIGDKEVENNALAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R MS++ + + + N Sbjct: 611 RTGEDLGVMSIDAFVAHLNADVENK 635 >gi|322833539|ref|YP_004213566.1| threonyl-tRNA synthetase [Rahnella sp. Y9602] gi|321168740|gb|ADW74439.1| threonyl-tRNA synthetase [Rahnella sp. Y9602] Length = 642 Score = 256 bits (655), Expect = 4e-66, Method: Composition-based stats. Identities = 76/447 (17%), Positives = 147/447 (32%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ ++ L+E RD +L L + + + G+ W G + A +R + Sbjct: 227 KQLNAYIQRLEEAGKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEAFVRMK 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 E+ P + LW ++G +++Y + M ++ P + IF Sbjct: 285 LKSYDYQEVKGPFMMDRVLWEKTGHWENYKEAMFT-TSSENREYCIKPMNCPGHVQIFNQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F + N Sbjct: 344 GLKSYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDE-VNSCIR 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + I ++ + P + E A+ Sbjct: 403 MVYDMYSTFGFEKIVVKLSTRPEKRIGTDEMWTRAED-----------------DLAAAL 445 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + A Y + L D L + ++ F + ++ Sbjct: 446 TENDIPFEYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGR----LN 494 Query: 300 ATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A++ G V + +G+M ++ + G W V +++ Sbjct: 495 ASYIGESNDRQVPVMIHRAILGSMERFIGILTEEYAGFFPTWMAPVQVVIMNIT------ 548 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 E++ +L G V D E+IG + L P ++ G K V KV + Sbjct: 549 DSQATYVEELTKKLQDAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAV 608 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R M + EV++ + Sbjct: 609 RTRRGKDLGSMDVSEVVDKLLAEIRSR 635 >gi|313891921|ref|ZP_07825522.1| threonine--tRNA ligase [Dialister microaerophilus UPII 345-E] gi|329121028|ref|ZP_08249659.1| threonine--tRNA ligase [Dialister micraerophilus DSM 19965] gi|313119564|gb|EFR42755.1| threonine--tRNA ligase [Dialister microaerophilus UPII 345-E] gi|327471190|gb|EGF16644.1| threonine--tRNA ligase [Dialister micraerophilus DSM 19965] Length = 634 Score = 256 bits (655), Expect = 4e-66, Method: Composition-based stats. Identities = 83/443 (18%), Positives = 157/443 (35%), Gaps = 41/443 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + + RD +L L + H+ G + P G + + RE + G Sbjct: 231 FLFVRSEAEKRDHRKLGKQLDLFS--FHEEGPGFPFFHPKGMVIRNLLIDYERELFRKYG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + S +LW++SG +D Y + M +++ P + F++ +SY Sbjct: 289 YEEIVTPIILSKNLWLQSGHWDHYRENM-YFTKIDNEDYAVKPMNCPGGILYFKTQQRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + L R EL G+ R R F DA+ F +TP+ + + + + Sbjct: 348 RDLPKRVGEFGLVHRHELHGALHGLFRVRNFTQDDAHIF-MTPKDMESEVISVVNMFKEL 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + GLK + P S E + + + Sbjct: 407 YDVFGLKYHI-ELSTRPENSMGSDE-----------------LWEIATNALRNAIESTNV 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D H E DSL + +++ T+ G Sbjct: 449 SYRINEGDGAFYGPKLDFHIE---DSLGRTWQCGTIQMDMQLP--------ERFDVTYVG 497 Query: 305 ADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H V + G G++ ++ + G W V I + + + Sbjct: 498 EDGEKHRAVMIHRAGYGSLERFIGILIEHYAGAFPTWCAPVQVKIIPV------SENYHN 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++Y ++ + G V D + +G + A + P V+VG K + + ++ R Sbjct: 552 YAQEVYKKMFEQGIRVEIDKGNDTLGYKIRKAQMEKIPYMVVVGEKESNSGNISVRSREK 611 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 G + + + I ++ + Sbjct: 612 GDEGTVDINKFIELILNKMKERK 634 >gi|83594816|ref|YP_428568.1| threonyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170] gi|123753041|sp|Q2RNL4|SYT_RHORT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|83577730|gb|ABC24281.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170] Length = 643 Score = 256 bits (655), Expect = 4e-66, Method: Composition-based stats. Identities = 80/438 (18%), Positives = 151/438 (34%), Gaps = 41/438 (9%) Query: 7 FLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L + RD ++ L + + ++G W P G + +R + G Sbjct: 232 YLTMLAEAEKRDHRRVGQEMDLF--HLQEEAQGAVFWHPKGWTVYRTLQNYMRRRLDLAG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E++ P L LW +SG ++ + + M +++ DK + P + IF+ IKSY Sbjct: 290 YVEVNTPMLVDRALWEKSGHWEKFRQNMF-ISEAEDKLLAMKPMNCPCHIQIFKQGIKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + + Sbjct: 349 RDLPLRMAEFGACHRNEASGALHGLMRVRAFVQDDAHIFCTEDQIVSET-QAFCDLLKSV 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + LG I ++ P S E D + D Sbjct: 408 YRDLGFTEIKVKFSDRPEVRAGSDE-----------------TWDKAEAALREATDAAGL 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ A Y + L D++ + + ++ G A + G Sbjct: 451 EWTLNPGEGAFYGPKLEF---VLRDAIGRDWQCGTLQVDFVLPERLG--------ADYVG 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG H + +G ++ + G+ W V ++ D Sbjct: 500 EDGDKHRPVMLHRAILGTFERFMGILIENCAGRFPFWLAPVQVVVATIT------SDADD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + A L G D E+I + L P+ ++VG K V ++ Sbjct: 554 YARTVLAALKAKGLRAVADLRNEKINYKVREHSLAKVPVMLVVGRKEAETGGVALRRLGG 613 Query: 424 GIREDMSLEEVINYASHR 441 +E ++L+E I ++ Sbjct: 614 QSQEVLALDEAIATLANE 631 >gi|52143093|ref|YP_083736.1| threonyl-tRNA synthetase [Bacillus cereus E33L] gi|51976562|gb|AAU18112.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus cereus E33L] Length = 639 Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats. Identities = 73/445 (16%), Positives = 154/445 (34%), Gaps = 42/445 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ ++L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGNELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TPE + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + S + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEASLENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + + + R +A +IE + + I + V Sbjct: 501 DEKNEKRRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWIAP------VQVKVIPVSNAVH 554 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +++ +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 555 VQYADEVADKLAQAGVRVERDMRDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKY 614 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + + L+ + +N + Sbjct: 615 GEEKSDVIELDMFVESIKEEINNRK 639 >gi|30262390|ref|NP_844767.1| threonyl-tRNA synthetase [Bacillus anthracis str. Ames] gi|47527681|ref|YP_019030.1| threonyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49185231|ref|YP_028483.1| threonyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|165870612|ref|ZP_02215266.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167633022|ref|ZP_02391348.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|167639601|ref|ZP_02397871.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|170686938|ref|ZP_02878157.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|170706731|ref|ZP_02897190.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|177649587|ref|ZP_02932589.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|190565155|ref|ZP_03018075.1| threonyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|227814802|ref|YP_002814811.1| threonyl-tRNA synthetase [Bacillus anthracis str. CDC 684] gi|229603163|ref|YP_002866723.1| threonine--tRNA ligase [Bacillus anthracis str. A0248] gi|254684964|ref|ZP_05148824.1| threonyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066] gi|254722370|ref|ZP_05184158.1| threonyl-tRNA synthetase [Bacillus anthracis str. A1055] gi|254737411|ref|ZP_05195115.1| threonyl-tRNA synthetase [Bacillus anthracis str. Western North America USA6153] gi|254743403|ref|ZP_05201088.1| threonyl-tRNA synthetase [Bacillus anthracis str. Kruger B] gi|254751726|ref|ZP_05203763.1| threonyl-tRNA synthetase [Bacillus anthracis str. Vollum] gi|254760245|ref|ZP_05212269.1| threonyl-tRNA synthetase [Bacillus anthracis str. Australia 94] gi|30257021|gb|AAP26253.1| threonine--tRNA ligase [Bacillus anthracis str. Ames] gi|47502829|gb|AAT31505.1| threonyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49179158|gb|AAT54534.1| threonyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|164713767|gb|EDR19290.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167512310|gb|EDR87686.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|167531834|gb|EDR94499.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|170128462|gb|EDS97330.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|170668989|gb|EDT19733.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|172084661|gb|EDT69719.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|190563182|gb|EDV17147.1| threonyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|227004862|gb|ACP14605.1| threonine--tRNA ligase [Bacillus anthracis str. CDC 684] gi|229267571|gb|ACQ49208.1| threonine--tRNA ligase [Bacillus anthracis str. A0248] Length = 639 Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats. Identities = 72/444 (16%), Positives = 156/444 (35%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ ++L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGNELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TPE + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G + + + P E + S + Sbjct: 410 VYKTFGFEYE-VELSTRPEDSMGDDE-----------------LWEQAEASLENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + I + V Sbjct: 501 DEKNEKRRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHV 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++ +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYADEVADKLAQAGVRVERDMRDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 + L+ + +N + Sbjct: 616 EEKSGVIELDMFVESMKEEINNRK 639 >gi|329296183|ref|ZP_08253519.1| threonyl-tRNA synthetase [Plautia stali symbiont] Length = 642 Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats. Identities = 73/442 (16%), Positives = 136/442 (30%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKPLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYD 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y + M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWDNYKEVMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQVRDE-VNSCIRMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E A+ + + Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEVDLAEAL-----------------KENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ F + AT+ G Sbjct: 451 PFEYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLP----KRLDATYVG 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + +G+M ++ G W V +++ + Sbjct: 500 ETNDRQTPVMIHRAILGSMERFIGILTEEFAGFFPSWLAPVQAVVMNIT------DGQAE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVSELTKKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGEKEVEAGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M ++ + + Sbjct: 614 KDLGSMDVDVFVEKLQQEIRSR 635 >gi|50913800|ref|YP_059772.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10394] gi|68052904|sp|Q5XDC4|SYT_STRP6 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|50902874|gb|AAT86589.1| Threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10394] Length = 647 Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats. Identities = 86/449 (19%), Positives = 164/449 (36%), Gaps = 38/449 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L L+E RD +L L MI + +G+ WLP G + I +++ Sbjct: 227 KAYLTRLEEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPDGATIRRTLERYITDKEL 284 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M + D D + + P + ++++H Sbjct: 285 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPVMDMGDGEEFVLRPMNCPHHIQVYKNH 344 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP ++ + R E G+ R RE + D + F TPE + + + Sbjct: 345 VRSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFV-TPEQIQEEFQRALQL 403 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSENTDF 239 + ++ L R D +T + + + + Sbjct: 404 IIDVYADFNLTDYRFRLS--------------YRDPNDTHKYYDNDEMWENAQSMLKAAL 449 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 450 DEMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD---- 498 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GADG++H M G+ + I + I ++ Sbjct: 499 LKYIGADGEEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQV----TVIPISNE 554 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L G DD E++ + + P Q+IVG K + D V ++ Sbjct: 555 AHIDYAWEVAKTLRDRGVRADVDDRNEKMQYKIRTSQTSKIPYQLIVGDKEMEDKSVNVR 614 Query: 420 HRLTGIREDMSLEEVINYASHRF-SNNRP 447 + S+EE + +RP Sbjct: 615 RYGSKATHTESVEEFVENILADIARKSRP 643 >gi|206974097|ref|ZP_03235015.1| threonyl-tRNA synthetase [Bacillus cereus H3081.97] gi|217959885|ref|YP_002338441.1| threonyl-tRNA synthetase [Bacillus cereus AH187] gi|229139078|ref|ZP_04267655.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST26] gi|206748253|gb|EDZ59642.1| threonyl-tRNA synthetase [Bacillus cereus H3081.97] gi|217066290|gb|ACJ80540.1| threonyl-tRNA synthetase [Bacillus cereus AH187] gi|228644433|gb|EEL00688.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST26] Length = 639 Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 154/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TPE + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALANVLHSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 CKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + I + V Sbjct: 501 DEKNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHV 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++ +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYADEVADKLAQAGVRVERDVRDEKLGYKIREAQMQKIPYVLVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E + L + +N + Sbjct: 616 EEKSEVVELNGFVESMKEEINNRK 639 >gi|260556061|ref|ZP_05828280.1| threonyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606] gi|260410116|gb|EEX03415.1| threonyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606] Length = 640 Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats. Identities = 77/441 (17%), Positives = 142/441 (32%), Gaps = 38/441 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD L L + + + G+ W G + +R+ Q G Sbjct: 231 YIKRIEEAEKRDHRKIGKALDLF--HMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +Y + M + P + +F +KSY Sbjct: 289 YQEIKTPQIVDFTLWEKSGHAANYAENMFT-THSESRNYAVKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + K L + Sbjct: 348 RDLPIRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGKE-VADFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + M+ + P D S D Sbjct: 407 YKDFGFEEVQMKLSTRPEKR-----------------VGDDALWDLAEKSLADALDAAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + + F + Sbjct: 450 EWELQPGEGAFYGPKIEF---SLKDCLGRVWQCGTIQCD----FNLPVRLDASY---VTE 499 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + +D V + +G+ ++ + P ++P + ++NI +A Sbjct: 500 ENERDQPVMLHRAILGSFERFIGILI---EHYAGFMPPWLSPVQACVMNITDS---QAEA 553 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++ A+L + G D E+IG + L P +++G + V + V ++ R Sbjct: 554 SEQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGK 613 Query: 425 IREDMSLEEVINYASHRFSNN 445 MS++ I+ + Sbjct: 614 NLGTMSVDAFIDLVKSAVAER 634 >gi|261418266|ref|YP_003251948.1| threonyl-tRNA synthetase [Geobacillus sp. Y412MC61] gi|319767774|ref|YP_004133275.1| threonyl-tRNA synthetase [Geobacillus sp. Y412MC52] gi|261374723|gb|ACX77466.1| threonyl-tRNA synthetase [Geobacillus sp. Y412MC61] gi|317112640|gb|ADU95132.1| threonyl-tRNA synthetase [Geobacillus sp. Y412MC52] Length = 652 Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats. Identities = 84/442 (19%), Positives = 167/442 (37%), Gaps = 32/442 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L T Q +G+ WLP G + I +++ G Sbjct: 234 YLRLLEEAKERDHRKLGKELELFTT-SQQVGQGLPLWLPKGATIRRIIERYIVDKEVALG 292 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P L S +L+ SG +D Y + M + +++ ++ P + I++S + SY Sbjct: 293 YDHVYTPVLGSVELYKTSGHWDHYKENMFPPMEMDNEELVLRPMNCPHHMMIYKSKLHSY 352 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP ++ R E+ G+ R R + DA+ F + + ++ L + Sbjct: 353 RELPIRIAELGTMHRYEMSGALTGLQRVRGMTLNDAHIFVRPDQIKDE-FKRVVNLILEV 411 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G++ R + + + + D++ Sbjct: 412 YKDFGIEEYSFRLSYRDPHDKE-------------KYYDDDEMWEKAQRMLREAMDELGL 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ +L +++ +S ++ F ++ T+ G Sbjct: 459 DYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFD----LTYIG 507 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DGK H + G + + + + +P +AP ++ +I + + D Sbjct: 508 EDGKPHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVKVIPVSP--EAHLDY 563 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + L + G V D+ E+IG + A + P ++VG K VS+ V ++ Sbjct: 564 AYDVQRTLKERGFRVEVDERDEKIGYKIREAQMQKIPYMLVVGDKEVSERAVNVRRYGEK 623 Query: 425 IREDMSLEEVINYASHRFSNNR 446 M L+E + + R Sbjct: 624 ESRTMGLDEFMALLADDVREKR 645 >gi|291327048|ref|ZP_06126787.2| threonine--tRNA ligase [Providencia rettgeri DSM 1131] gi|291311980|gb|EFE52433.1| threonine--tRNA ligase [Providencia rettgeri DSM 1131] Length = 653 Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats. Identities = 71/443 (16%), Positives = 142/443 (32%), Gaps = 40/443 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + RD +L L + + + G+ W G + +R + Sbjct: 243 YLLRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMAFWHNDGWTIFRELETFVRTKLKAYN 300 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 301 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCVKPMNCPGHVQIFNQGLKSY 359 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + + Sbjct: 360 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQILSE-VTSCIEMIYDV 418 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P + E D Sbjct: 419 YATFGFEKIVVKLSTRPEKRIGTDE-----------------MWDRAEEDLANALKSKGI 461 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F+ + + A++ G Sbjct: 462 EFEYQPGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FFLPGRLT----ASYVG 510 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + V + +G++ ++ + G W +++ D Sbjct: 511 ENNERIVPVMIHRAVLGSLERFIGILTEEYAGFFPTWLAPQQVVVMNIT------DSQAD 564 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ ++L VG D E+IG + L P ++ G K V KV ++ R Sbjct: 565 YVQELVSKLQSVGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRG 624 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 + + E + + + Sbjct: 625 KDLGSLDVNEFMTKLLEEIRSRQ 647 >gi|213156053|ref|YP_002318098.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB0057] gi|301346223|ref|ZP_07226964.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB056] gi|301596041|ref|ZP_07241049.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB059] gi|226701414|sp|B7I688|SYT_ACIB5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|213055213|gb|ACJ40115.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB0057] Length = 640 Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats. Identities = 77/441 (17%), Positives = 142/441 (32%), Gaps = 38/441 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD L L + + + G+ W G + +R+ Q G Sbjct: 231 YIKRIEEAEKRDHRKIGKALDLF--HMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +Y + M + P + +F +KSY Sbjct: 289 YQEIKTPQIVDFTLWEKSGHAANYVENMFT-THSESRNYAVKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + K L + Sbjct: 348 RDLPIRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGKE-VADFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + M+ + P D S D Sbjct: 407 YKDFGFEEVQMKLSTRPEKR-----------------VGDDALWDLAEKSLADALDAAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + + F + Sbjct: 450 EWELQPGEGAFYGPKIEF---SLKDCLGRVWQCGTIQCD----FNLPVRLDASY---VTE 499 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + +D V + +G+ ++ + P ++P + ++NI +A Sbjct: 500 ENERDQPVMLHRAILGSFERFIGILI---EHYAGFMPPWLSPVQACVMNITDS---QAEA 553 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++ A+L + G D E+IG + L P +++G + V + V ++ R Sbjct: 554 SEQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGK 613 Query: 425 IREDMSLEEVINYASHRFSNN 445 MS++ I+ + Sbjct: 614 NLGTMSVDAFIDLVKSAVAER 634 >gi|169797157|ref|YP_001714950.1| threonyl-tRNA synthetase [Acinetobacter baumannii AYE] gi|184156915|ref|YP_001845254.1| threonyl-tRNA synthetase [Acinetobacter baumannii ACICU] gi|215484620|ref|YP_002326855.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB307-0294] gi|239500701|ref|ZP_04660011.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB900] gi|301510743|ref|ZP_07235980.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB058] gi|332856896|ref|ZP_08436305.1| threonine--tRNA ligase [Acinetobacter baumannii 6013150] gi|332867201|ref|ZP_08437466.1| threonine--tRNA ligase [Acinetobacter baumannii 6013113] gi|332874008|ref|ZP_08441943.1| threonine--tRNA ligase [Acinetobacter baumannii 6014059] gi|226701398|sp|B7H005|SYT_ACIB3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238685492|sp|A3M299|SYT_ACIBT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238688031|sp|B0V5P2|SYT_ACIBY RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238690968|sp|B2HTH0|SYT_ACIBC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|169150084|emb|CAM87978.1| threonyl-tRNA synthetase [Acinetobacter baumannii AYE] gi|183208509|gb|ACC55907.1| Threonyl-tRNA synthetase [Acinetobacter baumannii ACICU] gi|193076379|gb|ABO11043.2| threonyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978] gi|213985706|gb|ACJ56005.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB307-0294] gi|322506811|gb|ADX02265.1| thrS [Acinetobacter baumannii 1656-2] gi|323516680|gb|ADX91061.1| threonyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715] gi|332726950|gb|EGJ58455.1| threonine--tRNA ligase [Acinetobacter baumannii 6013150] gi|332734140|gb|EGJ65272.1| threonine--tRNA ligase [Acinetobacter baumannii 6013113] gi|332737749|gb|EGJ68641.1| threonine--tRNA ligase [Acinetobacter baumannii 6014059] Length = 640 Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats. Identities = 77/441 (17%), Positives = 142/441 (32%), Gaps = 38/441 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD L L + + + G+ W G + +R+ Q G Sbjct: 231 YIKRIEEAEKRDHRKIGKALDLF--HMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +Y + M + P + +F +KSY Sbjct: 289 YQEIKTPQIVDFTLWEKSGHAANYAENMFT-THSESRNYAVKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + K L + Sbjct: 348 RDLPIRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGKE-VADFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + M+ + P D S D Sbjct: 407 YKDFGFEEVQMKLSTRPEKR-----------------VGDDALWDLAEKSLADALDAAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + + F + Sbjct: 450 EWELQPGEGAFYGPKIEF---SLKDCLGRVWQCGTIQCD----FNLPVRLDASY---VTE 499 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + +D V + +G+ ++ + P ++P + ++NI +A Sbjct: 500 ENERDQPVMLHRAILGSFERFIGILI---EHYAGFMPPWLSPVQACVMNITDS---QAEA 553 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++ A+L + G D E+IG + L P +++G + V + V ++ R Sbjct: 554 SEQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGK 613 Query: 425 IREDMSLEEVINYASHRFSNN 445 MS++ I+ + Sbjct: 614 NLGTMSVDAFIDLVKSAVAER 634 >gi|322385772|ref|ZP_08059416.1| threonine--tRNA ligase [Streptococcus cristatus ATCC 51100] gi|321270510|gb|EFX53426.1| threonine--tRNA ligase [Streptococcus cristatus ATCC 51100] Length = 649 Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats. Identities = 77/444 (17%), Positives = 158/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVDKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +++ H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYEDFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QVKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + + + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +S++E + +N Sbjct: 619 GQKETQTVSVDEFVEAILADIANK 642 >gi|196033851|ref|ZP_03101262.1| threonyl-tRNA synthetase [Bacillus cereus W] gi|228945992|ref|ZP_04108333.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|195993531|gb|EDX57488.1| threonyl-tRNA synthetase [Bacillus cereus W] gi|228813685|gb|EEM59965.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 639 Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats. Identities = 74/444 (16%), Positives = 155/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ ++L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGNELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TPE + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + S + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEASLENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + I + V Sbjct: 501 DEKNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHV 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++ +L++ G V D E++G + A + P V++G K + + V ++ Sbjct: 556 QYADEVADKLTQAGVRVERDMRDEKLGYKIREAQMQKVPYVVVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 + L+ + +N + Sbjct: 616 EEKSGVIELDMFVESMKEEINNRK 639 >gi|163795474|ref|ZP_02189441.1| Threonyl-tRNA synthetase [alpha proteobacterium BAL199] gi|159179460|gb|EDP63991.1| Threonyl-tRNA synthetase [alpha proteobacterium BAL199] Length = 640 Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats. Identities = 74/438 (16%), Positives = 147/438 (33%), Gaps = 40/438 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L I + + G W P G + IR G Sbjct: 232 YLHMLEEAEKRDHRRLGRELDLF--HIQEEAVGSVFWHPKGWTLYRVIENYIRGRLEEGG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L LW SG +D + + M +DK + P + +++ +KSY Sbjct: 290 YREIKTPQLIDRALWEASGHWDKFREAMFTANAEDDKVLALKPMNCPGHVQVYKQGLKSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + + S + + Sbjct: 350 RDLPLRLAEFGSCHRNEPSGALHGIMRVRAFTQDDAHIFCTEDQITSESI-RFCDLLKSV 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ P D + + D Sbjct: 409 YRDFGFEDIRIKFSDRPEVR-----------------AGEDAVWDRAEGALRSACDAAGL 451 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ A Y + L D++ + + ++ F + + A + Sbjct: 452 DTTLNPGEGAFYGPKLEF---VLRDAIGRDWQCGTLQVD----FVLPER----LDANYVA 500 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 G+ + G+M ++ + G+ +W + ++ N Sbjct: 501 ESGERKRPVMLHRAIFGSMERWIGILIEQYSGRFPMWLSPLQVVVATITN------DADG 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E++ A G V D E+I + P ++VG++ V ++ Sbjct: 555 YAEEVAAACKAAGLRVAMDRRNEKINYKIREHSEAKVPAILVVGAREAEGRSVAVRRLGG 614 Query: 424 GIREDMSLEEVINYASHR 441 +E ++L++ ++ Sbjct: 615 QAQEVLALDDAVHRLKTE 632 >gi|331266854|ref|YP_004326484.1| threonyl-tRNA synthetase [Streptococcus oralis Uo5] gi|326683526|emb|CBZ01144.1| threonyl-tRNA synthetase [Streptococcus oralis Uo5] Length = 647 Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats. Identities = 77/444 (17%), Positives = 157/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVDKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYEDFNLNEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QVKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + + + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + + ++E + +N Sbjct: 619 GQKETQTVPVDEFVAAILADIANK 642 >gi|322388243|ref|ZP_08061847.1| threonine--tRNA ligase [Streptococcus infantis ATCC 700779] gi|321140915|gb|EFX36416.1| threonine--tRNA ligase [Streptococcus infantis ATCC 700779] Length = 647 Score = 256 bits (654), Expect = 6e-66, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 157/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVDKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYEDFNLNEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QVKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + + + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTQKIPYQLIVGDKEMEDGTVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 +S++E + +N Sbjct: 619 GQKETNTVSVDEFVATILADIANK 642 >gi|56421254|ref|YP_148572.1| threonyl-tRNA synthetase [Geobacillus kaustophilus HTA426] gi|297529120|ref|YP_003670395.1| threonyl-tRNA synthetase [Geobacillus sp. C56-T3] gi|73919792|sp|Q5KWD2|SYT_GEOKA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56381096|dbj|BAD77004.1| threonyl-tRNA synthetase [Geobacillus kaustophilus HTA426] gi|297252372|gb|ADI25818.1| threonyl-tRNA synthetase [Geobacillus sp. C56-T3] Length = 652 Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats. Identities = 84/442 (19%), Positives = 167/442 (37%), Gaps = 32/442 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L T Q +G+ WLP G + I +++ G Sbjct: 234 YLRLLEEAKERDHRKLGKELELFTT-SQQVGQGLPLWLPKGATIRRIIERYIVDKEVALG 292 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P L S +L+ SG +D Y + M + +++ ++ P + I++S + SY Sbjct: 293 YDHVYTPVLGSVELYKTSGHWDHYKENMFPPMEMDNEELVLRPMNCPHHMMIYKSKLHSY 352 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP ++ R E+ G+ R R + DA+ F + + ++ L + Sbjct: 353 RELPIRIAELGTMHRYEMSGALTGLQRVRGMTLNDAHIFVRPDQIKDE-FKRVVNLILEV 411 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G++ R + + + + D++ Sbjct: 412 YKDFGIEEYSFRLSYRDPHDKE-------------KYYDDDEMWEKAQRMLREAMDELGL 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ +L +++ +S ++ F ++ T+ G Sbjct: 459 DYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFD----LTYIG 507 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DGK H + G + + + + +P +AP ++ +I + + D Sbjct: 508 EDGKPHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVKVIPVSP--EAHLDY 563 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + L + G V D+ E+IG + A + P ++VG K VS+ V ++ Sbjct: 564 AYDVQRTLKERGFRVEVDERDEKIGYKIREAQMQKIPYMLVVGDKEVSERAVNVRRYGEK 623 Query: 425 IREDMSLEEVINYASHRFSNNR 446 M L+E + + R Sbjct: 624 ESRTMGLDEFMALLADDVREKR 645 >gi|319790149|ref|YP_004151782.1| threonyl-tRNA synthetase [Thermovibrio ammonificans HB-1] gi|317114651|gb|ADU97141.1| threonyl-tRNA synthetase [Thermovibrio ammonificans HB-1] Length = 658 Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats. Identities = 78/463 (16%), Positives = 157/463 (33%), Gaps = 61/463 (13%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 FL L+E RD + +L L + G+ W P G + + EE + G Sbjct: 232 FLHRLEEAKKRDHRVLGKQLDLFGIY-EEAGPGLVFWHPNGAIIRQEIEQWVEEEHRKRG 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEM-------LRLADRNDKA--------------M 104 + P + ADLW SG Y+ Y + M +R Sbjct: 291 YQRIYTPHIMKADLWKRSGHYNFYRENMFFVPVVEHDEEERLGNDEVPLTCSEIEKAHWY 350 Query: 105 IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSF 163 P + I++S ++SYR+LP F++ +R E G++R R F D + F Sbjct: 351 AVKPMNCPGHILIYKSQVRSYRDLPIRFFEFGTVYRYEKSGSLHGLLRVRGFTQDDGHIF 410 Query: 164 DLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC 223 + + + I + + ++++ T + Sbjct: 411 CRPDQLKEEIQGV-------------MDYIMDLLSTFKL------DYVINVGTRPEKFIG 451 Query: 224 SKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 +++ + + + +IVE A Y D+ + D++ ++ Sbjct: 452 TEEAWEHATNALIEALKERGFEYNIVEGDGAFYGPKIDI---AVLDAIGRKWDGPTIQVD 508 Query: 284 VGHIFYFGTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 F ++ T+ DG+ + +G++ ++ + G W Sbjct: 509 ----FNLPERFD----LTYVDRDGQKKRPVMVHRAIMGSIERFIGLLIEHYAGLFPTW-- 558 Query: 343 SVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPL 402 I D +++YA+L + G V DD ++G + A+ P Sbjct: 559 ----LAPVQAVIIPVSDKYLDYADEVYAKLKEAGIRVKLDDESAKVGYKIRKAETQKIPY 614 Query: 403 QVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 +IVG + + V ++ + G +M L++ ++ Sbjct: 615 MLIVGEREKENQTVSVRSKREGDLGEMELQQFLDKILTEIKEK 657 >gi|145298933|ref|YP_001141774.1| threonyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida A449] gi|166223317|sp|A4SMA4|SYT_AERS4 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|142851705|gb|ABO90026.1| threonyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida A449] Length = 642 Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats. Identities = 82/447 (18%), Positives = 151/447 (33%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E RD +L L + + + G+ W G + IR + Sbjct: 227 KQLKGYLQRLEEASKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELETFIRGK 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 E+ P + LW SG ++ Y + M ++ P + IF Sbjct: 285 LKEYDYQEVKGPFMMDRVLWERSGHWEKYAQAMFT-TQSENREYAIKPMNCPGHVQIFNQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F + + + + Sbjct: 344 GLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIMEEVSACIRM 403 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y G ++I ++ + P S E D + Sbjct: 404 VYDVYGT-FGFENIVVKLSTRPEQRIGSDE-----------------AWDRAEAALAEAL 445 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + A Y + L D L + ++ G Sbjct: 446 VLNGLKYDLQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFALPGRLG-------- 494 Query: 300 ATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 AT+ G D + H V + +G++ ++ + ++P +AP + ++NI + Sbjct: 495 ATYVGEDNERHVPVMIHRAILGSLERFIGILT---EEYAGLFPTWLAPTQAVVMNITDN- 550 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D K+ L+ G D E+IG + L P ++ G K V K+ + Sbjct: 551 --QADYAVKVAKALNDAGLRAKADLRNEKIGFKIREHTLKRVPFMLVCGDKEVEAGKIAV 608 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R +EE++ + Sbjct: 609 RTRKGADLGTYPVEELVALLTQEVQTR 635 >gi|229150586|ref|ZP_04278801.1| Threonyl-tRNA synthetase [Bacillus cereus m1550] gi|228632895|gb|EEK89509.1| Threonyl-tRNA synthetase [Bacillus cereus m1550] Length = 640 Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 155/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TP+ + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPKQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + + +G++ A++ G W + + I + V Sbjct: 501 DENNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHE 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +I +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYANEIAHKLAQAGVRVEQDARDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E ++L+ + N + Sbjct: 616 EEKSEVIALDVFVASIEEEIKNRK 639 >gi|317129892|ref|YP_004096174.1| threonyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] gi|315474840|gb|ADU31443.1| threonyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] Length = 645 Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats. Identities = 79/441 (17%), Positives = 171/441 (38%), Gaps = 33/441 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L + T + + +G+ WLP G + I + + R G Sbjct: 235 LKMLEEAKERDHRKLGKELGIFT-INQKVGQGLPLWLPKGATIRRTIERYIVDLEERLGY 293 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG +D Y ++M + +++ ++ P + I+++ + SYR Sbjct: 294 DHVYTPVLGSVELYKTSGHWDHYHEDMFPTMEMDNEDLVLRPMNCPHHMMIYKNQLHSYR 353 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 NLP ++ R E+ G+ R R + DA+ F + + ++ ++ Sbjct: 354 NLPVRIAELGTMHRHEMSGALAGLQRVRAMTLNDAHIFCRPDQLKDE-FIRVVELVQNVY 412 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G+ R + + + + +D+ Sbjct: 413 QDFGIDDYYFRLSYRDPEDKE-------------KYVDNDEMWEKAQAMLKEAMEDMNVD 459 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y DV ++ +L +++ +S ++ F+ ++ + G Sbjct: 460 YVEAEGEAAFYGPKLDV---QVKTALGKDETLSTVQLD----FHLPNRF----ELAYVGE 508 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DGK+H + G + + + + +P +AP ++ +I + +V D Sbjct: 509 DGKEHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVEVIPV---SEVHMDYV 563 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 ++ +L + G V D E++G + A + P +++G K + S V ++ Sbjct: 564 RRVEDKLKQAGVRVHVDVRDEKLGYKIREAQMQKIPYILVLGDKEIEASTVNVRKYGQKD 623 Query: 426 REDMSLEEVINYASHRFSNNR 446 E + L+E ++ N + Sbjct: 624 SEAVGLDEFVSSMKEEIQNRK 644 >gi|325982725|ref|YP_004295127.1| threonyl-tRNA synthetase [Nitrosomonas sp. AL212] gi|325532244|gb|ADZ26965.1| threonyl-tRNA synthetase [Nitrosomonas sp. AL212] Length = 635 Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats. Identities = 78/442 (17%), Positives = 155/442 (35%), Gaps = 41/442 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L L+E RD +L L + + G+ W P G + +R + Sbjct: 229 KNYLHRLEEAEKRDHRKIGKQLNLF--HMQDEASGMVFWHPKGWTLWQQIEQYMRNILSH 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + DLWV SG ++++ + M + +++ P + IF ++ Sbjct: 287 NGYHEIRTPQILDKDLWVRSGHWENFRENMF-ITHSDERDFAIKPMNCPGHVQIFNQGLR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP F + R+E G+MR R F DA+ F + + Sbjct: 346 SYRELPIRFAEFGSCHRNEASGALHGIMRVRAFTQDDAHIFCTEDQIQQEVVEF-IDLLK 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G + I ++ + P+ S+ D + +++ Sbjct: 405 IVYADFGFREILIKLSTRPLKR-----------------VGSEAQWDKSEAALEAALNEV 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + L D + + ++ G A + Sbjct: 448 KLEWERQPGEGAFYGPKIEF---SLKDCIGRLWQCGTLQLDFSMPDRLG--------AEY 496 Query: 303 KGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D V + +G++ ++ ++ G +W +++ + Sbjct: 497 VAEDNSRQVPVMLHRAILGSLERFIGILIENYAGALPLWLSPEQVVVLNI------SRTQ 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D +K+ A+L + G D E+I + L P Q+IVG + V +K+ +++R Sbjct: 551 IDYAQKVVAQLKENGVRASLDLRNEKITYKIREHSLQKLPYQIIVGDEEVRANKIAVRNR 610 Query: 422 LTGIREDMSLEEVINYASHRFS 443 + M L + + + S Sbjct: 611 VGENLGQMKLPDFLVRFNEELS 632 >gi|227111545|ref|ZP_03825201.1| threonyl-tRNA synthetase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 642 Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 146/445 (32%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 + Y + + + RD +L L + + + G+ W G + A +R + Sbjct: 229 LASYLQRLEEASKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEAFVRMKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + +W ++G +++Y + M ++ P + IF + Sbjct: 287 SYQYQEVKGPFMMDRVMWEKTGHWENYKEAMFT-TSSENREYCIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F + N Sbjct: 346 KSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRDE-VNSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G + I ++ + P S E D + Sbjct: 405 YDMYSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAAALTE 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y + L D L + ++ F + ++A+ Sbjct: 448 NNIEFAYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGR----LNAS 496 Query: 302 FKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G + V + +G+M ++ G W V I++ Sbjct: 497 YVGESNERQVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQAVIINIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ +L + G V D E+IG + L P ++ G K V KV ++ Sbjct: 551 QSDYVNELTRKLQEAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R M + EVI+ + Sbjct: 611 RRGKDLGSMDVSEVISKLQQEIRSR 635 >gi|253688275|ref|YP_003017465.1| threonyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259516611|sp|C6DFY6|SYT_PECCP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|251754853|gb|ACT12929.1| threonyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 642 Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 144/445 (32%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 + Y + + RD +L L + + + G+ W G + A +R + Sbjct: 229 LASYLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEAFVRMKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + +W ++G +++Y + M ++ P + IF + Sbjct: 287 SYQYQEVKGPFMMDRVMWEKTGHWENYKEAMFT-TSSENREYCIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F + N Sbjct: 346 KSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRDE-VNSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G + I ++ + P S E D + Sbjct: 405 YDMYSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAAALTE 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 A Y + L D L + ++ F + ++A+ Sbjct: 448 NNIEFDYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGR----LNAS 496 Query: 302 FKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G + V + +G+M ++ G W V +++ Sbjct: 497 YVGESNERQVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT------DT 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ +L + G V D E+IG + L P ++ G K V KV ++ Sbjct: 551 QSDYVNELTRKLQEAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R + + EVI+ + Sbjct: 611 RRGKDLGSLDVSEVISKLQQEIRSR 635 >gi|307709563|ref|ZP_07646017.1| threonyl-tRNA synthetase [Streptococcus mitis SK564] gi|307619694|gb|EFN98816.1| threonyl-tRNA synthetase [Streptococcus mitis SK564] Length = 647 Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats. Identities = 77/444 (17%), Positives = 158/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVDKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYEDFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QVKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + + + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +S+++ + +N Sbjct: 619 GQKETQTVSVDDFVQAILADIANK 642 >gi|167035206|ref|YP_001670437.1| prolyl-tRNA synthetase [Pseudomonas putida GB-1] gi|189083507|sp|B0KTK4|SYP_PSEPG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|166861694|gb|ABZ00102.1| prolyl-tRNA synthetase [Pseudomonas putida GB-1] Length = 571 Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats. Identities = 121/270 (44%), Positives = 172/270 (63%), Gaps = 10/270 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + + V A++REE Sbjct: 1 MRTSQYLLATQKETPADAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P++Q A+LW ESGR++ YG E+LRL DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPSIQPAELWQESGRWEQYGPELLRLKDRHQRDFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M + Sbjct: 121 ELSSYKQLPLNMYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQETYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F RLGL P++A++G IGG SHEF VLA++GE V S D+ E + Sbjct: 181 YSNVFTRLGLDFRPVQADTGSIGGSYSHEFHVLAESGEDDVIFSDS-SDYAANIEKAEA- 238 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 + + T A T ++ D+ Sbjct: 239 --------IPRETVRPAPTEELRLVDTPDA 260 Score = 163 bits (412), Expect = 6e-38, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 114/207 (55%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ + V RGIEVGHIF GTKYS + Sbjct: 364 DDKHYFGVNWERDLPVPQVADLRNVVEGDPSPDGQGTLVIKRGIEVGHIFQLGTKYSEAL 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK + MG YGIG RVVAA IE S+D KGIIW D++APF+I+L+ ++ Sbjct: 424 KCQVLGENGKPVVLSMGCYGIGVSRVVAAAIEQSYDDKGIIWNDALAPFQIALVPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 V R+A +K+YA L+ G +V DD + G +FA +L+G P +++V + ++D + Sbjct: 484 DVVREATDKLYAELTAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLADGNL 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E KHR + + L EV+ + R Sbjct: 544 EYKHRTEQDAQALPLNEVLTFLQARVR 570 >gi|289167501|ref|YP_003445770.1| Threonyl-tRNA synthetase, threonine-tRNA ligase [Streptococcus mitis B6] gi|288907068|emb|CBJ21902.1| Threonyl-tRNA synthetase, threonine-tRNA ligase [Streptococcus mitis B6] Length = 647 Score = 256 bits (653), Expect = 7e-66, Method: Composition-based stats. Identities = 75/444 (16%), Positives = 158/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVDKEV 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 G + P + S +L+ SG +D Y ++M D D + + P + ++++ H Sbjct: 287 AAGYQHVYTPPIASVELYKTSGHWDHYREDMFPPMDMGDGEEFVLRPMNCPHHIEVYKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYEDFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QVKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + + + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +S+++ + +N Sbjct: 619 GQKETQTVSVDDFVQAILADIANK 642 >gi|297538938|ref|YP_003674707.1| threonyl-tRNA synthetase [Methylotenera sp. 301] gi|297258285|gb|ADI30130.1| threonyl-tRNA synthetase [Methylotenera sp. 301] Length = 635 Score = 256 bits (653), Expect = 7e-66, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 139/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L + + G+ W P G V +R+ Sbjct: 231 YLFQLEEAEKRDHRKLGKQLDYF--HMQDDAPGMVFWHPRGWSIWQEVEQYMRKMFRDYN 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ PT+ LW +SG + +Y + M + + P + IF S + SY Sbjct: 289 YQEVRTPTIMDRTLWEKSGHWQNYREGMF-VTSSESRDYAVKPMNCPGHVQIFNSSLHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F T E + + Sbjct: 348 RDLPLRLAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEEQVEAEVADFIKMLYKA 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + ++ + P + D S Sbjct: 407 YGDFGFNDVLVKLSTRPEKR-----------------IGTDADWDKAETSLANALKLNNL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L DSL + ++ G A + Sbjct: 450 DFEYQPGEGAFYGPKIEF---TLKDSLGRLWQCGTIQLDPNLPERLG--------AEYVA 498 Query: 305 ADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + H V + +G+M ++ + P +AP ++ ++NI + D Sbjct: 499 EDNSRKHPVMLHRAIVGSMERFIGILI---ENYAGAMPLWLAPVQVMVLNI---SENQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L K G +D E+I + + P ++ G + + V ++ R Sbjct: 553 YVRQVVEMLKKNGIRCEFDLRNEKITYKIREHSMQKMPYLLVAGEREMQTGHVAVRTRKG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M +E +I Sbjct: 613 EDLGSMPIEALIERLKAEIETK 634 >gi|257092825|ref|YP_003166466.1| threonyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045349|gb|ACV34537.1| threonyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 638 Score = 256 bits (653), Expect = 7e-66, Method: Composition-based stats. Identities = 82/442 (18%), Positives = 146/442 (33%), Gaps = 41/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + G+ W G V +R G Sbjct: 231 YLHLLEEAEKRDHRKLGRQLDLF--HLQDEAPGMVFWHAKGWTIWQEVEQYMRRLLGENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW SG + +Y + M ++ P + IF ++SY Sbjct: 289 YCEVKTPMIMDRTLWERSGHWQNYAEHMFT-TASENRDYAIKPMNCPGHIQIFNQGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + +I Sbjct: 348 RDLPLRLAEFGSCHRNEPSGALHGIMRVRAFVQDDAHIFCTEAQVLPET-AAFIDLLEKI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ + P S D + Sbjct: 407 YADFGFTDILVKLSTRPDKR-----------------IGSDAVWDRAEAALAEALAAKGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ F + + A + G Sbjct: 450 AYDLQPGEGAFYGPKIEF---SLKDCLGRVWQCGTLQLD----FALPER----LDAHYVG 498 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D H V + +G++ ++ + G +W + + + D Sbjct: 499 EDNDRHVPVMLHRAILGSLERFIGILIEHYAGAMPLW------LSPMQVVVLNISEKQGD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E++ A L + G D E+I + L P QV+VG K V+ + V ++ R Sbjct: 553 YAEQVAATLRRAGLRAEADLRNEKITRKIREHSLNKLPYQVVVGDKEVAANLVAVRTRGG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MSLE +I ++ Sbjct: 613 QDLGQMSLESLIRQLLEEVASR 634 >gi|251798759|ref|YP_003013490.1| threonyl-tRNA synthetase [Paenibacillus sp. JDR-2] gi|247546385|gb|ACT03404.1| threonyl-tRNA synthetase [Paenibacillus sp. JDR-2] Length = 645 Score = 256 bits (653), Expect = 7e-66, Method: Composition-based stats. Identities = 77/441 (17%), Positives = 165/441 (37%), Gaps = 35/441 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E RD +L + T + +G+ WLP G K + I + + R G Sbjct: 235 LHFLEEAKKRDHRKLGKELKMFT-FSREVGQGLPLWLPNGAKVRRTLERYIVDLEERLGY 293 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L + +L+ SG ++ Y ++M + +++ ++ P + +++S ++SYR Sbjct: 294 EHVYTPVLANVELYKISGHWEHYSEDMFPVMALDNEELVLRPMNCPHHMMVYKSDMRSYR 353 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ R E+ G+ R R + DA+ F P+ K + ++ +++ Sbjct: 354 DLPVRIAEMGTMHRYEMSGALTGLHRVRAMTLNDAHIFCR-PDQIKEEFARVVNLIRKVY 412 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS-KDFMDFPIPSENTDFDDIIS 244 G+K R D +T+ + + + +++ Sbjct: 413 EDFGIKEYRFRLS--------------YRDPQDTEKYFQNDEMWEMSQRMLREVVEELGL 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ +L + + +S ++ F ++ + G Sbjct: 459 PFFEAEGEAAFYGPKLDV---QIKTALGKEETLSTAQLD----FLLPDRF----ELEYIG 507 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DGK H + G + + + + P ++P + +I + Sbjct: 508 EDGKKHRPVVIHR--GIISTMERMTAFLLENFAGALPLWLSPVQAKVIPVST---AYEAY 562 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ +L G V D E++G + A L P ++VG V ++ R G Sbjct: 563 AREVEEKLQLAGIRVESDLRNEKLGYKIREAQLEKLPYMLVVGENEAQSGSVSVRKRGEG 622 Query: 425 IREDMSLEEVINYASHRFSNN 445 + E++ + + Sbjct: 623 DIGAKPVAELVELLQNEIATK 643 >gi|324991486|gb|EGC23419.1| threonine--tRNA ligase [Streptococcus sanguinis SK353] Length = 647 Score = 256 bits (653), Expect = 7e-66, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 152/445 (34%), Gaps = 32/445 (7%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 KY + RD +L L MI + +G+ WLP G + I +++ Sbjct: 228 LKKYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATVRRELERYIVDKE 285 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRS 120 +G + P L S +L+ SG ++ Y ++M D D + + P + +++ Sbjct: 286 LASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKH 345 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SYR LP +I + R E ++ + + +TPE + + + Sbjct: 346 HVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQL 405 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + ++ L R + D E + D Sbjct: 406 IIDVYADFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALD 452 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 453 EMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD----L 501 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + GADG++H M G+ + I + + + I ++ Sbjct: 502 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEA 557 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ +L G D+ E++ + + P Q+IVG K V D V ++ Sbjct: 558 HIDYAWQVAKKLRDKGVRADVDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVRR 617 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 + ++E + ++ Sbjct: 618 YGQKETHTIPVDEFVEQILADIASK 642 >gi|15674621|ref|NP_268795.1| threonyl-tRNA synthetase [Streptococcus pyogenes M1 GAS] gi|71910240|ref|YP_281790.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS5005] gi|22654136|sp|Q9A115|SYT_STRP1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|13621733|gb|AAK33516.1| putative threonyl-tRNA synthetase 1 [Streptococcus pyogenes M1 GAS] gi|71853022|gb|AAZ51045.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS5005] Length = 647 Score = 256 bits (653), Expect = 7e-66, Method: Composition-based stats. Identities = 86/449 (19%), Positives = 164/449 (36%), Gaps = 38/449 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L L+E RD +L L MI + +G+ WLP G + I +++ Sbjct: 227 KAYLTRLEEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPDGATIRRTLERYITDKEL 284 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M + D D + + P + ++++H Sbjct: 285 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPVMDMGDGEEFVLRPMNCPHHIQVYKNH 344 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP ++ + R E G+ R RE + D + F TPE + + + Sbjct: 345 VRSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFV-TPEQIQEEFQRALQL 403 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSENTDF 239 + ++ L R D +T + + + + Sbjct: 404 IIDVYADFNLTDYRFRLS--------------YRDPNDTHKYYDNDEMWENAQSMLKAAL 449 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 450 DEMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD---- 498 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GADG++H M G+ + I + I ++ Sbjct: 499 LKYIGADGEEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQV----TVIPISNE 554 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L G DD E++ + + P Q+IVG K + D V ++ Sbjct: 555 AHIDYAWEVAKTLRDRGVRADVDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVR 614 Query: 420 HRLTGIREDMSLEEVINYASHRF-SNNRP 447 + S+EE + +RP Sbjct: 615 RYGSKTTHTESVEEFVENILADIARKSRP 643 >gi|270293200|ref|ZP_06199411.1| threonine--tRNA ligase [Streptococcus sp. M143] gi|270279179|gb|EFA25025.1| threonine--tRNA ligase [Streptococcus sp. M143] Length = 647 Score = 256 bits (653), Expect = 7e-66, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 156/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVDKEI 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 G + P + S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 287 AAGYQHVYTPPIASVELYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYEDFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QVKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + + + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + ++E ++ +N Sbjct: 619 GQKETNTVPVDEFVSAILADIANK 642 >gi|222152709|ref|YP_002561885.1| threonyl-tRNA synthetase [Streptococcus uberis 0140J] gi|254783540|sp|B9DU13|SYT_STRU0 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|222113521|emb|CAR41303.1| threonyl-tRNA synthetase [Streptococcus uberis 0140J] Length = 648 Score = 256 bits (653), Expect = 7e-66, Method: Composition-based stats. Identities = 80/449 (17%), Positives = 160/449 (35%), Gaps = 36/449 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L L+E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KAYLTRLEEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPDGATIRRTLERYITDKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG ++ Y ++M D D + + P + ++++H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKNH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP ++ + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSENTDFD 240 + ++ L R D +T+ + + + + D Sbjct: 407 IDVYEDFNLTDYRFRLS--------------YRDPKDTEKYYDNDEMWENAQSMLKAALD 452 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 453 EMGVEYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD----L 501 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + GADG++H M G+ + I + I ++ Sbjct: 502 KYIGADGEEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQV----TVIPISNEA 557 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ L G DD E++ + + P Q+IVG K + D V ++ Sbjct: 558 HIDYAWEVAKALRDRGIRADVDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVRR 617 Query: 421 RLTGIREDMSLEEVINYASHRF-SNNRPV 448 + SL E ++ +RPV Sbjct: 618 YGSKATHTESLSEFMDTILADIARKSRPV 646 >gi|227327045|ref|ZP_03831069.1| threonyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 642 Score = 256 bits (653), Expect = 7e-66, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 145/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + + RD +L L + + + G+ W G + A +R + Sbjct: 232 YLQRLEEASKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKSYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + +W ++G +++Y + M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVMWEKTGHWENYKEAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRDE-VNSCIKMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D + Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAAALTENNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ F + ++A++ G Sbjct: 451 EFAYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGR----LNASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+M ++ G W V I++ D Sbjct: 500 ESNERQVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQAVIINIT------DSQSD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L + G V D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVNELTRKLQEAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVETGKVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M + EVI+ + Sbjct: 614 KDLGSMDVSEVISKLQQEIRSR 635 >gi|322377382|ref|ZP_08051873.1| threonine--tRNA ligase [Streptococcus sp. M334] gi|321281582|gb|EFX58591.1| threonine--tRNA ligase [Streptococcus sp. M334] Length = 647 Score = 256 bits (653), Expect = 7e-66, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 158/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVDKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + F + + D+ Sbjct: 407 IDVYEDFNLTEYRFRLSLRDPEDKE-------------KYFDNDQMWENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QVKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + + + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +S+++ + +N Sbjct: 619 GQKETQTVSVDDFVQAILADIANK 642 >gi|237736526|ref|ZP_04567007.1| threonyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817] gi|229421568|gb|EEO36615.1| threonyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817] Length = 638 Score = 256 bits (653), Expect = 7e-66, Method: Composition-based stats. Identities = 73/443 (16%), Positives = 154/443 (34%), Gaps = 41/443 (9%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + Y + + RD +L L + ++ G +LP G + + + + E Sbjct: 227 KLKDYLTLLEEAEKRDHRKLGKELDLF--FVSEYGPGFPIFLPKGMAIRNTLINLWKREH 284 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G E+ P + + +LW SG + +Y + M ++ P + ++ Sbjct: 285 TLAGYTEIMTPIMLNKELWETSGHWYNYRENMYTST-IDETEFAIKPMNCPGGIIAYKYQ 343 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP ++ R E G+MR R F DA+ F + + + + Sbjct: 344 LHSYKDLPIRCGELGTVHRHEFSGALHGLMRVRCFTQDDAHIFMTPEQIEEEIIGVVNLI 403 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 G E+ + T + S + + + + Sbjct: 404 DKFYSKLFG------------------FEYHIELSTKPEKAIGSDEIWEKAESALAGALE 445 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I + A Y D K+ D++ + ++ F ++ Sbjct: 446 KIGKSYKLNPGDGAFYGPKLDF---KIKDAIGRTWQCGTIQLD----FNLPERFD----I 494 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 ++ G DG+ H + G++ ++ + G +W +++ + Sbjct: 495 SYIGEDGEKHRPVMIHRVVYGSIERFIGILIEHYAGAFPLWLAPTQVKVLTI------ND 548 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEI 418 + E+I L + G DD E IG + A+ P+Q+I+G V + +V I Sbjct: 549 ETKPYAEEICRTLLERGIRAELDDRAESIGYKIREANGKYKVPVQLIIGKNEVENREVNI 608 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + R + + M L+E ++ Sbjct: 609 RRRGSQEQTSMKLDEFLDMIVDE 631 >gi|237653686|ref|YP_002890000.1| threonyl-tRNA synthetase [Thauera sp. MZ1T] gi|237624933|gb|ACR01623.1| threonyl-tRNA synthetase [Thauera sp. MZ1T] Length = 638 Score = 256 bits (653), Expect = 7e-66, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 146/442 (33%), Gaps = 41/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +++E RD +L L I + G+ W G V +R G Sbjct: 231 YLHMIEEAEKRDHRKLGRQLDLF--HIQDEAPGMVFWHAKGWTLWQQVEQYLRRTIGEHG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG + Y +++ + P + IF +KSY Sbjct: 289 YQEVKTPQIVDRSLWEKSGHWGMY-SDLMFTTQSEKRDYAVKPMNCPCHIQIFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + S + ++ Sbjct: 348 RDLPLRMAEFGSCHRNEPSGSLHGIMRVRNFVQDDAHIFCAESQVQAES-AEFIRLLQQV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + ++ + P + E A+ ++ P E Sbjct: 407 YQDFGFTDVQVKLSTRPEKRVGTDEQWDAAEAALAAALDAQGLQYELQPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ G A + Sbjct: 458 --------GAFYGPKIEF---SLKDCLGRVWQCGTLQLDFNLPVRLG--------AEYVD 498 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D V + +G++ ++ H G +W V +++ + + Sbjct: 499 EDNTKKVPVMLHRAILGSLERFIGILIEHHAGAMPLWLAPVQAVVMNI------SEGQAE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E+ ARL K G V D E+I + + P Q+++G K + V ++ R Sbjct: 553 YAEEAVARLKKAGFRVEADLRNEKINYKIREHSVQKLPYQIVIGEKEKAAGLVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MSL+ +I Sbjct: 613 QDLGQMSLDSLIERWRREVEAK 634 >gi|90417311|ref|ZP_01225237.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2207] gi|90330896|gb|EAS46159.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2207] Length = 642 Score = 256 bits (653), Expect = 7e-66, Method: Composition-based stats. Identities = 77/440 (17%), Positives = 140/440 (31%), Gaps = 41/440 (9%) Query: 5 KYFLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K ++ L + RD + KL L + + + G W P G + +R +Q Sbjct: 229 KAYINRLAEAEKRDHRKINKKLDLY--HMQEEAPGSIFWHPKGWSVYSAIEEYMRNKQRE 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW +SG D +G +M L +D+ P + +F +K Sbjct: 287 QGYQEIKTPQIVDMSLWEKSGHADKFGDDMFSLQT-DDRNYAVKPMNCPCHVQVFNQGLK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F DA+ F + ++ Sbjct: 346 SYRDLPLRLAEFGSCHRNEPSGSLHGIMRVRSFTQDDAHIFCTEEQIQPE-VSQFIDFLH 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G I R + P S E D + D Sbjct: 405 EVYADFGFDEIIYRLSTRPPERVGSDE-----------------DWDRAEEALGQALDAK 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + L D + ++ ++ A + Sbjct: 448 SLPWQELPGEGAFYGPKIEF---SLKDCIGRVWQLGTIQVDFSMPGRLD--------AQY 496 Query: 303 KGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 DG V + +G+ ++ ++G W ++ Sbjct: 497 VAEDGARKVPVMLHRAILGSFERFIGILIEQYEGAFPFWLAPEQAVVANIT------DAQ 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + +++ L G V D E+IG + + P ++VG V ++ R Sbjct: 551 AEYAQEVAKSLQNKGFRVNCDLRNEKIGFKIRGHSMQRVPFILVVGDNEKESRTVAVRTR 610 Query: 422 LTGIREDMSLEEVINYASHR 441 + LE+V + Sbjct: 611 DGKDLGSLPLEQVEAMCTTE 630 >gi|19745635|ref|NP_606771.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS8232] gi|94988057|ref|YP_596158.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS9429] gi|94991943|ref|YP_600042.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS2096] gi|139474254|ref|YP_001128970.1| threonyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo] gi|306827837|ref|ZP_07461106.1| threonine--tRNA ligase [Streptococcus pyogenes ATCC 10782] gi|25453286|sp|Q8P234|SYT_STRP8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123080426|sp|Q1JMY5|SYT_STRPC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123382336|sp|Q1JD10|SYT_STRPB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166225506|sp|A2RFY5|SYT_STRPG RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|19747765|gb|AAL97270.1| putative threonyl-tRNA synthetase 1 [Streptococcus pyogenes MGAS8232] gi|94541565|gb|ABF31614.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS9429] gi|94545451|gb|ABF35498.1| Threonyl-tRNA synthetase [Streptococcus pyogenes MGAS2096] gi|134272501|emb|CAM30764.1| threonyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo] gi|304429946|gb|EFM32986.1| threonine--tRNA ligase [Streptococcus pyogenes ATCC 10782] Length = 647 Score = 255 bits (652), Expect = 8e-66, Method: Composition-based stats. Identities = 86/449 (19%), Positives = 164/449 (36%), Gaps = 38/449 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L L+E RD +L L MI + +G+ WLP G + I +++ Sbjct: 227 KAYLTRLEEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPDGATIRRTLERYITDKEL 284 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M + D D + + P + ++++H Sbjct: 285 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPVMDMGDGEEFVLRPMNCPHHIQVYKNH 344 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP ++ + R E G+ R RE + D + F TPE + + + Sbjct: 345 VRSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFV-TPEQIQEEFQRALQL 403 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSENTDF 239 + ++ L R D +T + + + + Sbjct: 404 IIDVYADFNLTDYRFRLS--------------YRDPNDTHKYYDNDEMWENAQSMLKAAL 449 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 450 DEMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD---- 498 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GADG++H M G+ + I + I ++ Sbjct: 499 LKYIGADGEEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQV----TVIPISNE 554 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L G DD E++ + + P Q+IVG K + D V ++ Sbjct: 555 AHIDYAWEVAKTLRDRGVRADVDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVR 614 Query: 420 HRLTGIREDMSLEEVINYASHRF-SNNRP 447 + S+EE + +RP Sbjct: 615 RYGSKATHTESVEEFVENILADIARKSRP 643 >gi|326336128|ref|ZP_08202300.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691637|gb|EGD33604.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 649 Score = 255 bits (652), Expect = 8e-66, Method: Composition-based stats. Identities = 86/451 (19%), Positives = 163/451 (36%), Gaps = 39/451 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD +L L T ++ +G+ WLP G + + A +R+ Q Sbjct: 227 LTEYLTLLEEAKKRDHRKLGKELELFT-FSNKVGQGLPLWLPKGAALRERLEAFLRKAQK 285 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRS 120 + G ++ P + +L+V SG ++ YGK+ + + + P + +I+ S Sbjct: 286 QAGYEQVVTPHIGHKNLYVTSGHWEKYGKDSFQPIATPNEGEEYLLKPMNCPHHCEIYNS 345 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 H SY++LP F + +R E G+ R R F DA+ F TPE + + Sbjct: 346 HPWSYKDLPKRFAEFGTVYRYEQSGELHGLTRVRCFTQDDAHIFC-TPEQLDAEFKHVID 404 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L +F LG ++ + D + D S + Sbjct: 405 LVLYVFGSLGFENFTAQVSLR--------------DPENLSKYIGSDENWAKAESAIINA 450 Query: 240 DDIISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 +L ++E A Y D + D+L + ++ ++ Sbjct: 451 AKEKNLTYVIETGEAAFYGPKLDFM---VKDALGRSWQLGTIQVDYNLP--------ERF 499 Query: 299 SATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 +KGAD + H + G+M A++ G +W +NI + Sbjct: 500 DLWYKGADNEMHRPVMIHRAPFGSMERFVAILLEHTAGNLPLW------LVPEQVNILSV 553 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + K+ L + D+ E IG + A+ +P +IVG + + + Sbjct: 554 SEKYEGYAYKVANLLQEADLRPHVDNRNETIGKKIREAETQKYPYMIIVGEEEEKNGTLS 613 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN-RP 447 ++ M + + I + N RP Sbjct: 614 VRKHGGADLGTMKIADFITLIQEEINKNIRP 644 >gi|332358962|gb|EGJ36783.1| threonine--tRNA ligase [Streptococcus sanguinis SK49] Length = 647 Score = 255 bits (652), Expect = 9e-66, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 153/445 (34%), Gaps = 32/445 (7%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 KY + RD +L L MI + +G+ WLP G + I +++ Sbjct: 228 LKKYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATVRRELERYIVDKE 285 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRS 120 +G + P L S +L+ SG ++ Y ++M D D + + P + +++ Sbjct: 286 LASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKH 345 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SYR LP +I + R E ++ + + +TPE + + + Sbjct: 346 HVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQL 405 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + ++ L R + D E + D Sbjct: 406 IIDVYADFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALD 452 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 453 EMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD----L 501 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + GADG++H M G+ + I + + + I ++ Sbjct: 502 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEA 557 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ +L G D+ E++ + + P Q+IVG K V D V ++ Sbjct: 558 HIDYAWQVAKKLRDKGVRADVDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVRR 617 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 +S++E + ++ Sbjct: 618 YGQKETHTISVDEFVEQILADIASK 642 >gi|328946743|gb|EGG40881.1| threonine--tRNA ligase [Streptococcus sanguinis SK1087] Length = 647 Score = 255 bits (652), Expect = 9e-66, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 152/445 (34%), Gaps = 32/445 (7%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 KY + RD +L L MI + +G+ WLP G + I +++ Sbjct: 228 LKKYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATVRRELERYIVDKE 285 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRS 120 +G + P L S +L+ SG ++ Y ++M D D + + P + +++ Sbjct: 286 LASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKH 345 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SYR LP +I + R E ++ + + +TPE + + + Sbjct: 346 HVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQL 405 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + ++ L R + D E + D Sbjct: 406 IIDVYADFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALD 452 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 453 EMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD----L 501 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + GADG++H M G+ + I + + + I ++ Sbjct: 502 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEA 557 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ +L G D+ E++ + + P Q+IVG K V D V ++ Sbjct: 558 HIDYAWQVAKKLRDKGVRADVDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVRR 617 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 + ++E + ++ Sbjct: 618 YGQKETHTIPVDEFVEQILADIASK 642 >gi|89900130|ref|YP_522601.1| threonyl-tRNA synthetase [Rhodoferax ferrireducens T118] gi|89344867|gb|ABD69070.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodoferax ferrireducens T118] Length = 669 Score = 255 bits (652), Expect = 9e-66, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 145/441 (32%), Gaps = 37/441 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + L +L+E RD +L L I H+ G+ W P G V +R+ Sbjct: 257 QQHLTMLEEAEKRDHRKLGRELDLF--HIDDHAPGLVFWHPKGWTLWQGVEQYMRQVYRD 314 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW ++G +D Y + M + + P + IF+ IK Sbjct: 315 NGYQEVKGPQILDKSLWEKTGHWDKYRENMFT-TESEKREYALKPMNCPGHILIFKQGIK 373 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + + R+E G+MR R F D + F + + + Sbjct: 374 SYRDLPLRYGEFGQCHRNEPSGGLHGIMRVRGFTQDDGHIFCTEDQILQECVDYT-ALLQ 432 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +++ G ++I + + P S D D + Sbjct: 433 KVYADFGFENIIYKVATRPEQR-----------------IGSDDVWDKAEAALIESLRAS 475 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I A Y + L D++ + + ++ + A + Sbjct: 476 GREFEISPGEGAFYGPKIEY---TLKDAIGRHWQCGTIQVDFSMP--------ERLDAEY 524 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DG H + +G++ ++ G W L A + C Sbjct: 525 VGEDGARHRPVMLHRAIVGSLERFIGILIEESAGALPTWL--APVQVAVLNITDAQAEYC 582 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 R+ EK+ L D E+I + + P ++VG K + V ++ R Sbjct: 583 REIVEKLKNALPDQRLRAVADLRNEKITFKIREHSMQKLPYILVVGDKEKAAGTVAVRAR 642 Query: 422 LTGIREDMSLEEVINYASHRF 442 MSL+ + S Sbjct: 643 GGLDLGVMSLDAFVQKISSDI 663 >gi|188577599|ref|YP_001914528.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A] gi|188522051|gb|ACD59996.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 649 Score = 255 bits (652), Expect = 9e-66, Method: Composition-based stats. Identities = 74/438 (16%), Positives = 138/438 (31%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + + RD L + + + G+ W P G V +R+ +G Sbjct: 247 YILRMEEADKRDHRRIGKAQDLF--HLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSG 304 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D+Y M + + P + +F + SY Sbjct: 305 YGEVRCPQILDVSLWQKSGHWDNYQDAMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSY 363 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F L + L + Sbjct: 364 RDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCL-ESQIESEVTAFHQQALAV 422 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P D + + Sbjct: 423 YTAFGFDDIQIKIALRPEKR-----------------LGDDATWDKAEAALRSALGVCGV 465 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + H L D++ ++ ++ G A + Sbjct: 466 EWQELPGEGAFYGPKIEYH---LKDAIGRTWQLGTMQVDFMMPGRLG--------AEYVD 514 Query: 305 AD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + K H V + +G+M ++ H G W V ++ D Sbjct: 515 ENSQKKHPVMLHRAIVGSMERFIGILIEHHAGAFPSWLAPVQVVVANIT------DAQAD 568 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L+ G V D E+IG + L P ++VG + + V ++ R Sbjct: 569 YVDAVRKTLANQGFRVSADLRNEKIGYKIREHTLQRVPYLLVVGDREKENGAVAVRTRSG 628 Query: 424 GIREDMSLEEVINYASHR 441 M++ I Sbjct: 629 EDLGTMTVSAFIERLQAE 646 >gi|237808486|ref|YP_002892926.1| threonyl-tRNA synthetase [Tolumonas auensis DSM 9187] gi|259516783|sp|C4LFH3|SYT_TOLAT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|237500747|gb|ACQ93340.1| threonyl-tRNA synthetase [Tolumonas auensis DSM 9187] Length = 642 Score = 255 bits (652), Expect = 9e-66, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 140/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + IR++ Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWIIFRELETFIRQKLREYD 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW SG +D Y M ++ P + IF +KSY Sbjct: 290 YEEVKGPFMMDRVLWERSGHWDKYADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + + + Y Sbjct: 349 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCAENQIQDEVSACIRMVYDTY 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G K+I ++ + P S E D + + Sbjct: 409 ST-FGFKNIAVKLSTRPEKRIGSDE-----------------MWDRAEEALSAALKHNNI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ G AT+ G Sbjct: 451 EFDLQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFALPGRLG--------ATYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D H V + +G+M ++ G +W + +++ D Sbjct: 500 EDNDRHVPVMIHRAILGSMERFIGILTEETAGYFPLWLAPLQAVVMNIT------DNQAD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ L++ G D E+IG + L P ++ G K + ++ ++ R Sbjct: 554 YVKEVVNTLNESGIRAKADLRNEKIGFKIREHTLKRVPYMLVCGDKEMEAGEIAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + +++ S Sbjct: 614 VDLGKFKVTDLVEQLRKEISTR 635 >gi|332358692|gb|EGJ36515.1| threonine--tRNA ligase [Streptococcus sanguinis SK355] Length = 647 Score = 255 bits (652), Expect = 9e-66, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 152/445 (34%), Gaps = 32/445 (7%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 KY + RD +L L MI + +G+ WLP G + I +++ Sbjct: 228 LKKYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATVRRELERYIVDKE 285 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRS 120 +G + P L S +L+ SG ++ Y ++M D D + + P + +++ Sbjct: 286 LASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKH 345 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SYR LP +I + R E ++ + + +TPE + + + Sbjct: 346 HVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQL 405 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + ++ L R + D E + D Sbjct: 406 IIDVYADFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALD 452 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 453 EMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD----L 501 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + GADG++H M G+ + I + + + I ++ Sbjct: 502 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEA 557 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ +L G D+ E++ + + P Q+IVG K V D V ++ Sbjct: 558 HIDYAWQVAKKLRDKGVRADVDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVRR 617 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 + ++E + ++ Sbjct: 618 YGQKETHTIPVDEFVEQILADIASK 642 >gi|253755215|ref|YP_003028355.1| threonyl-tRNA synthetase [Streptococcus suis BM407] gi|251817679|emb|CAZ55427.1| threonyl-tRNA synthetase [Streptococcus suis BM407] Length = 650 Score = 255 bits (652), Expect = 9e-66, Method: Composition-based stats. Identities = 89/449 (19%), Positives = 177/449 (39%), Gaps = 38/449 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KAYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRTLERYITDKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG ++ Y ++M D D + + P + ++++H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWEHYSEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKNH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP ++ + R E G+ R RE + D + F TPE + + K Sbjct: 347 VRSYRELPVRIAELGMMHRYEKSGALTGLQRVREMTLNDGHIFV-TPEQIQEEFKKALQL 405 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSENTDF 239 + ++ L R D + + + + + + Sbjct: 406 IIDVYADFNLNDYRFRLS--------------YRDPEDKEKYYDNDEMWENAQRMLKGAM 451 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 452 DEMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERF----G 500 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 T+ GADG++H M G+ + I + +P +AP ++++I I + Sbjct: 501 LTYIGADGEEHRPVMIHRGVISTMERFTAILI--ETYKGAFPTWLAPTQVTMIPISV--E 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D K+ L G V D+ E++ + + P Q+IVG K + D+ V ++ Sbjct: 557 AHLDYAWKVAKELQDRGVRVHVDERNEKMQYKIRQSQTSKIPYQLIVGDKEMEDNAVNVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRF-SNNRP 447 + + S+ E +++ +RP Sbjct: 617 RYGSKATQTQSVSEFVDHILADIARKSRP 645 >gi|146319020|ref|YP_001198732.1| threonyl-tRNA synthetase [Streptococcus suis 05ZYH33] gi|146321228|ref|YP_001200939.1| threonyl-tRNA synthetase [Streptococcus suis 98HAH33] gi|253752085|ref|YP_003025226.1| threonyl-tRNA synthetase [Streptococcus suis SC84] gi|253753910|ref|YP_003027051.1| threonyl-tRNA synthetase [Streptococcus suis P1/7] gi|166225507|sp|A4W2F0|SYT_STRS2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166225509|sp|A4VW43|SYT_STRSY RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|145689826|gb|ABP90332.1| Threonyl-tRNA synthetase [Streptococcus suis 05ZYH33] gi|145692034|gb|ABP92539.1| Threonyl-tRNA synthetase [Streptococcus suis 98HAH33] gi|251816374|emb|CAZ52005.1| threonyl-tRNA synthetase [Streptococcus suis SC84] gi|251820156|emb|CAR46495.1| threonyl-tRNA synthetase [Streptococcus suis P1/7] gi|292558668|gb|ADE31669.1| Threonyl-tRNA synthetase [Streptococcus suis GZ1] gi|319758452|gb|ADV70394.1| threonyl-tRNA synthetase [Streptococcus suis JS14] Length = 650 Score = 255 bits (652), Expect = 9e-66, Method: Composition-based stats. Identities = 89/449 (19%), Positives = 177/449 (39%), Gaps = 38/449 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KAYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRTLERYITDKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG ++ Y ++M D D + + P + ++++H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWEHYSEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKNH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP ++ + R E G+ R RE + D + F TPE + + K Sbjct: 347 VRSYRELPVRIAELGMMHRYEKSGALTGLQRVREMTLNDGHIFV-TPEQIQEEFKKALQL 405 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSENTDF 239 + ++ L R D + + + + + + Sbjct: 406 IIDVYADFNLNDYRFRLS--------------YRDPEDKEKYYDNDEMWENAQRMLKGAM 451 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 452 DEMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERF----G 500 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 T+ GADG++H M G+ + I + +P +AP ++++I I + Sbjct: 501 LTYIGADGEEHRPVMIHRGVISTMERFTAILI--ETYKGAFPTWLAPTQVTMIPISV--E 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D K+ L G V D+ E++ + + P Q+IVG K + D+ V ++ Sbjct: 557 AHLDYAWKVAKELQDRGVRVHVDERNEKMQYKIRQSQTSKIPYQLIVGDKEMEDNAVNVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRF-SNNRP 447 + + S+ E +++ +RP Sbjct: 617 RYGSKATQTQSVSEFVDHILADIARKSRP 645 >gi|332367135|gb|EGJ44871.1| threonine--tRNA ligase [Streptococcus sanguinis SK1059] Length = 647 Score = 255 bits (652), Expect = 9e-66, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 152/445 (34%), Gaps = 32/445 (7%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 KY + RD +L L MI + +G+ WLP G + I +++ Sbjct: 228 LKKYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATVRRELERYIVDKE 285 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRS 120 +G + P L S +L+ SG ++ Y ++M D D + + P + +++ Sbjct: 286 LASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKH 345 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SYR LP +I + R E ++ + + +TPE + + + Sbjct: 346 HVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQL 405 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + ++ L R + D E + D Sbjct: 406 IIDVYADFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALD 452 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 453 EMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD----L 501 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + GADG++H M G+ + I + + + I ++ Sbjct: 502 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEA 557 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ +L G D+ E++ + + P Q+IVG K V D V ++ Sbjct: 558 HIDYAWQVAKKLRDKGVRADVDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVRR 617 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 + ++E + ++ Sbjct: 618 YGQKETHTIPVDEFVEQILADIASK 642 >gi|56460507|ref|YP_155788.1| threonyl-tRNA synthetase [Idiomarina loihiensis L2TR] gi|73919798|sp|Q5QYN4|SYT_IDILO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56179517|gb|AAV82239.1| Threonyl-tRNA synthetase [Idiomarina loihiensis L2TR] Length = 638 Score = 255 bits (652), Expect = 9e-66, Method: Composition-based stats. Identities = 82/448 (18%), Positives = 152/448 (33%), Gaps = 41/448 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E RD + L + + G+ W G + IRE+ Sbjct: 227 KQLKAYLQRLEEAEKRDHRKIAKAQDLF--HWQEEAPGMVFWHHNGWTIFRELETYIREK 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 E+ P + LW +SG ++ + E++ ++ P + IF Sbjct: 285 MREYEYQEVKGPMMMDRVLWEKSGHWEKF-SELMFTTSSENREYAVKPMNCPGHVQIFNQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 344 GLKSYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFC-TEQQVQEEVAGCIK 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + G ++I ++ + P D + Sbjct: 403 MVYETYKTFGFENIDVKLSTRPEKR-----------------LGDDATWDRSETALAQAL 445 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + S + A Y + LFD L + ++ G Sbjct: 446 KNNDIDFSYLPGEGAFYGPKIEF---TLFDCLGRAWQCGTIQLDFALPGRLG-------- 494 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 AT+ G D + H + +G++ ++ + +P ++P ++ L+NI + Sbjct: 495 ATYVGEDNERHTPVMIHRAILGSLERFMGILI---EEYAGHFPLWLSPTQVVLMNITDN- 550 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D K+ L++ G D E+IG + L P ++VG K V +V + Sbjct: 551 --QSDYVRKVVKTLNEKGIRASADLRNEKIGFKIREHTLKRVPYLLVVGDKEVEAGEVAV 608 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNNR 446 + R LE+ I + Sbjct: 609 RTRGGEDLGKFPLEDFITRVEDEVRTRK 636 >gi|21243325|ref|NP_642907.1| threonyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306] gi|25453288|sp|Q8PJE1|SYT_XANAC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|21108867|gb|AAM37443.1| threonyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306] Length = 634 Score = 255 bits (652), Expect = 9e-66, Method: Composition-based stats. Identities = 74/438 (16%), Positives = 139/438 (31%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + + RD L + + + G+ W P G V +R+ +G Sbjct: 232 YILRMEEADKRDHRRIGKAQDLF--HLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D+Y M + + P + +F + SY Sbjct: 290 YGEVRCPQILDVSLWQKSGHWDNYQDAMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F L P+ L + Sbjct: 349 RDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLEPQIESE-VTAFHQQALAV 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P D + + Sbjct: 408 YTAFGFDDIQIKIALRPEKR-----------------LGDDATWDKAEAALRSALGVCGV 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + H L D++ ++ ++ G A + Sbjct: 451 EWQELPGEGAFYGPKIEYH---LKDAIGRTWQLGTMQVDFMMPGRLG--------AEYVD 499 Query: 305 AD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + K H V + +G+M ++ H G W V ++ + Sbjct: 500 ENSQKKHPVMLHRAIVGSMERFIGILIEHHAGAFPSWLAPVQVVVANIT------DAQAE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L+ G V D E+IG + L P ++VG + + V ++ R Sbjct: 554 YVDSVRKTLANQGFRVSADLRNEKIGYKIREHTLQRVPYLLVVGDREKENGAVAVRTRSG 613 Query: 424 GIREDMSLEEVINYASHR 441 M++ I Sbjct: 614 EDLGTMTVSAFIERLQAE 631 >gi|261821451|ref|YP_003259557.1| threonyl-tRNA synthetase [Pectobacterium wasabiae WPP163] gi|261605464|gb|ACX87950.1| threonyl-tRNA synthetase [Pectobacterium wasabiae WPP163] Length = 642 Score = 255 bits (652), Expect = 9e-66, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 146/445 (32%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 + Y + + + RD +L L + + + G+ W G + A +R + Sbjct: 229 LASYLQRLEEASKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEAFVRMKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + +W ++G +++Y + M ++ P + IF + Sbjct: 287 SYQYQEVKGPFMMDRVMWEKTGHWENYKEAMFT-TSSENREYCIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F + N Sbjct: 346 KSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRDE-VNSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G + I ++ + P S E D + Sbjct: 405 YDMYSTFGFEKIVVKLSTRPEKRIGSDE-----------------MWDRAEADLAAALTE 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y + L D L + ++ F + ++A+ Sbjct: 448 NNIEFAYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGR----LNAS 496 Query: 302 FKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G + V + +G+M ++ G W V +++ Sbjct: 497 YVGESNERQVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ +L + G V D E+IG + L P ++ G K V KV ++ Sbjct: 551 QADYVNELTQKLQEAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R + + EVI+ + Sbjct: 611 RRGKDLGSLDVSEVISKLLQEIRSR 635 >gi|306825714|ref|ZP_07459053.1| threonine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432075|gb|EFM35052.1| threonine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 647 Score = 255 bits (652), Expect = 1e-65, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 157/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVDKEI 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 G + P + S +L+ SG +D Y ++M D D + + P + ++++ H Sbjct: 287 AAGYQHVYTPPIASVELYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNCPHHIEVYKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + + PE + + K+ Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEEEFKKILQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + DD Sbjct: 407 IDVYEDFNLTDYRFRLS-----YRDPEDKHKYFDNDEM--------WENAQRMLKAAMDD 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MELDYFEAEGEAAFYGPKLDI---QVKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + + + I ++ Sbjct: 503 YVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + + ++E + +N Sbjct: 619 GQKETQTVPVDEFVAAILADIANK 642 >gi|30020454|ref|NP_832085.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|229127762|ref|ZP_04256751.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|29896005|gb|AAP09286.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|228655839|gb|EEL11688.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] Length = 640 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 155/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TP+ + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPKQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + + +G++ A++ G W + + I + V Sbjct: 501 DENNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHE 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +I +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYANEIALKLAQAGVRVEQDARDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E ++L+ + N + Sbjct: 616 EEKSEVIALDVFVATIEEEIKNRK 639 >gi|311694949|gb|ADP97822.1| prolyl-tRNA synthetase [marine bacterium HP15] Length = 577 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 123/282 (43%), Positives = 168/282 (59%), Gaps = 1/282 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y + +E P DAEI SH+LMLR GMI + + G+Y+WLP+G + L V I+REE Sbjct: 1 MRASRYLIATQKETPADAEIISHQLMLRAGMIRKLAAGLYTWLPMGLRTLRKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +++GA E+ +P +Q A+LW ESGR+ YG E+LR+ DR+ + +GPTHEEV+TD+ R+ Sbjct: 61 MDKSGAQEVLMPAVQPAELWEESGRWTQYGGELLRMKDRHGRDFCFGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQ+Q KFRDE RPRFGVMR+REFLMKDAYSF L E +Y M + Sbjct: 121 EISSYKELPANFYQVQTKFRDERRPRFGVMRAREFLMKDAYSFHLNAESLNETYELMHRT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL ++A+SG IGG SHEF VLA +GE + D+ E + Sbjct: 181 YCAIFDRFGLDYRAVQADSGAIGGSASHEFHVLASSGEDDIVF-STGSDYAANIEKAEAV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 + A E + L + + + + Sbjct: 240 APSGTRPAPAEEMKEVATPDQKTIEAVSQLLGIDATRTVKTL 281 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 71/193 (36%), Positives = 108/193 (55%), Gaps = 3/193 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A D+ N D P+ K RGIEVGHIF G KYS M+AT +GK Sbjct: 378 ERDAALERVEDLRNVVEGDPSPDGKGTLEIRRGIEVGHIFKLGNKYSTAMNATVLDENGK 437 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEK 367 + MG YG+G RVVAA IE +HD GIIWPD++APF+++++ + A +A EK Sbjct: 438 TVIMDMGCYGLGVSRVVAAAIEQNHDENGIIWPDAIAPFQVAIVTLNAHKSPTVAEAGEK 497 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +Y +L + G DV DD E+ G +FA +L+G P + +V + ++ +E K R ++ Sbjct: 498 LYEQLRQAGYDVLLDDRKERPGVKFADMELIGIPHRFVVSERGLAAGTLEYKGRKDAEKQ 557 Query: 428 DMSLEEVINYASH 440 D+ + E + + + Sbjct: 558 DVPVAEALPFLVN 570 >gi|260655005|ref|ZP_05860493.1| threonine--tRNA ligase [Jonquetella anthropi E3_33 E1] gi|260630320|gb|EEX48514.1| threonine--tRNA ligase [Jonquetella anthropi E3_33 E1] Length = 623 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 155/442 (35%), Gaps = 42/442 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y + + RD ++ L + H+ G + P G ++++ R Sbjct: 212 TYLKRMEEAKKRDHRKIGKEMDLFS--FHKEGIGFPFFHPKGMVVMNSLLDFWRRLHTLN 269 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E P + + DLWV+SG +D Y + M ++ P + I++ + S Sbjct: 270 GYSEARTPMILNRDLWVQSGHWDHYQQNM-YFTTIDEMPCAIKPMNCPGGILIYKDRLHS 328 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH-SYNKMFVSYL 182 Y+ P ++ R E G+MR R F DA+ F + + Y Sbjct: 329 YKEFPIRLAELGHVHRHEKTGELHGLMRVRSFTQDDAHHFCTPEQIKDEVKFIMALDDY- 387 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ ++ + + P S E A+ + ++ Sbjct: 388 -VYSKVFGFKYHVELSTRPDNSIGSDELWATAEK-----------------ALQETLEET 429 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + + A Y D H E R + G I + Sbjct: 430 NTPYVLNPGDGAFYGPKIDFHLED----------CIGRTWQCGTI-QLDFSMPEKFDMVY 478 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DGK+H + +G++ ++ + G W +AP ++ ++ + + Sbjct: 479 IGPDGKEHRPVMLHRTILGSIERFMGILIEQYAGAFPYW---MAPVQVKILPVN---ESH 532 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + +L+ G V D E++G + A + P +++G K V + V ++ R Sbjct: 533 VAYAKDLKDQLADRGHRVEIDLSDEKLGKKIRNAQVEKVPFMLVIGDKEVENKTVALRDR 592 Query: 422 LTGIREDMSLEEVINYASHRFS 443 G + +S E++ ++++ Sbjct: 593 AEGDKGSVSQEQLFELLANQYD 614 >gi|228478293|ref|ZP_04062901.1| threonyl-tRNA synthetase [Streptococcus salivarius SK126] gi|228249972|gb|EEK09242.1| threonyl-tRNA synthetase [Streptococcus salivarius SK126] Length = 648 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 79/447 (17%), Positives = 157/447 (35%), Gaps = 34/447 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L L+E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KAYLKRLEEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRVLERYIVDKEV 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSH 121 G + P + S +L+ SG +D Y ++M D D + P + ++++ H Sbjct: 287 AAGYQHVYTPPIASVELYKTSGHWDHYREDMFPTMDMGDGEAFVLRPMNCPHHIEVYKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE K + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVTPEQIKDEFQRTLQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + F + + + + DD Sbjct: 407 IDVYEDFNLTDYRFRLS-------------YRDPKDTHKYFDNDEMWENAQSMLKSAMDD 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + +S ++ F ++ Sbjct: 454 MELDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPQQV----TVIPVSNEAH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G V D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 TDYAWEVAKQLRDRGIRVEVDERNEKMQYKIRASQTQKIPYQLIVGDKEMEDGTVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFS-NNRP 447 ++ E + + +RP Sbjct: 619 GQKQTHTEAVSEFVENILADIARKSRP 645 >gi|167758905|ref|ZP_02431032.1| hypothetical protein CLOSCI_01251 [Clostridium scindens ATCC 35704] gi|167663312|gb|EDS07442.1| hypothetical protein CLOSCI_01251 [Clostridium scindens ATCC 35704] Length = 641 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 80/443 (18%), Positives = 143/443 (32%), Gaps = 41/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L M+ G +LP G + + RE Sbjct: 229 EYLHMMEEAKKRDHRKLGRELGLF--MMCDEGPGFPFFLPKGMVLKNTLLDYWRELHKEN 286 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G +E+S P + S LW SG +D Y M +++ P + +++S +S Sbjct: 287 GYVEVSTPIILSRHLWENSGHWDHYKDNMYTTM-IDEEDYAVKPMNCPGGMLVYKSEPRS 345 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 Y++LP ++ L R E G+ R R F DA+ F + + Sbjct: 346 YKDLPLRMGELGLVHRHEKSGALHGLFRVRCFTQDDAHIFMTPEQIRDEIKGVARLI--- 402 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I ++ V T S + + DD+ Sbjct: 403 ----------------DEIYSLFGFKYHVELSTRPDNSMGSDEDWEMATEGLRGALDDLG 446 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H E R + G I + + Sbjct: 447 LDYMVNEGDGAFYGPKIDFHLED----------SIGRTWQCGTI-QLDMQMPQRFDLEYT 495 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 GADG+ H + G++ ++ G W V + + + Sbjct: 496 GADGEKHRPIMIHRVAFGSIERFIGILIEHFAGAFPTWLAPVQVKVLPI------SEKHL 549 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +K+ +L + G D+ E+IG + A + P ++VG+K + V ++ R Sbjct: 550 EYGKKVLEQLEEAGIRAELDERAEKIGYKIREAQMNKIPYMLVVGAKEEEQNLVSVRSRF 609 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 G + I+ Sbjct: 610 AGDEGQKDIASFIDAIKEEIQAK 632 >gi|229085293|ref|ZP_04217535.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-44] gi|228698012|gb|EEL50755.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-44] Length = 642 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 82/443 (18%), Positives = 162/443 (36%), Gaps = 40/443 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + R+ ++L L M + + G+ +LP GQ + + + +RE Q + Sbjct: 235 YLQFVEEAAKRNHRKLGNELELF--MFSEEAPGMPFYLPKGQIIRNELESFLREIQQKYD 292 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW ESG +D Y M ++ ++K+ P + +F+ ++SY Sbjct: 293 YQEVRTPIMMNQGLWEESGHWDHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKHKLRSY 351 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R E G++R R F DA+ +TPE + + + Sbjct: 352 RDLPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIESEIKSVLQQIDYV 410 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + + P E A++ + + + Sbjct: 411 YRTFGFEY-EVELSTRPEDSMGDVELWNQAES-----------------ALENVLESLNY 452 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H + D+L + + ++ F K+ + Sbjct: 453 KYRVNEGDGAFYGPKIDFH---IKDALKRSHQCGTVQLD----FQMPEKFD----LNYID 501 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + +G+ ++ G W SV I + N+ V + Sbjct: 502 ERNEKRRPVVIHRAVLGSFDRFLGILIEHFGGAFPAWLASVQVKIIPVSNL-----VHEE 556 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++I +L VG V D GE++G + A + P +++G K + + V ++ Sbjct: 557 YTKEIEEKLQSVGLRVERDVRGEKLGYKIREAQIQKVPYVLVIGDKEMENGAVNVRKYGE 616 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 E +SL I N + Sbjct: 617 EKSEVVSLATFIESLQVEIHNRK 639 >gi|104783084|ref|YP_609582.1| prolyl-tRNA synthetase [Pseudomonas entomophila L48] gi|123380820|sp|Q1I6D7|SYP_PSEE4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|95112071|emb|CAK16798.1| prolyl-tRNA synthetase [Pseudomonas entomophila L48] Length = 571 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 119/237 (50%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + + V A++REE Sbjct: 1 MRTSQYLLATQKETPADAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P++Q A+LW ESGR++ YG E+LRL DR+D+ GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPSIQPAELWQESGRWEQYGPELLRLKDRHDRDFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M + Sbjct: 121 ELSSYKQLPLNMYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQETYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF RLGL P++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSNIFTRLGLDFRPVQADTGSIGGSYSHEFHVLASSGEDDVIFSDS-SDYAANIEKA 236 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 114/207 (55%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ + V RGIEVGHIF GTKYS + Sbjct: 364 DDKHYFGVNWERDLPVPQVADLRNVVEGDPSPDGQGTLVIKRGIEVGHIFQLGTKYSEAL 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK + MG YGIG RVVAA IE S+D KGIIW D++APF+I+L+ ++ Sbjct: 424 KCQVLGENGKPVVLSMGCYGIGVSRVVAAAIEQSYDDKGIIWNDALAPFQIALVPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 V R+A +K+YA L+ G +V DD + G +FA +L+G P +++V + ++D + Sbjct: 484 DVVREATDKLYAELTAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLADGNL 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E KHR + + L EV+ + R Sbjct: 544 EYKHRTESEAQALPLNEVLTFLQARIR 570 >gi|300114474|ref|YP_003761049.1| threonyl-tRNA synthetase [Nitrosococcus watsonii C-113] gi|299540411|gb|ADJ28728.1| threonyl-tRNA synthetase [Nitrosococcus watsonii C-113] Length = 644 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 72/441 (16%), Positives = 160/441 (36%), Gaps = 39/441 (8%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKG-IYSWLPLGQKALDNVNAIIRE 59 + + +L L+E RD L L + I + + G + W P+G + + +E Sbjct: 226 KALEAYLHRLEEAEKRDHRRIGSDLDLFS--IQEEAGGGLVFWHPMGARIRRVIEDFWQE 283 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 + P + +LW SG D Y + M + + + + P + +++ Sbjct: 284 RHTAASYETLYTPHIAHEELWQTSGHTDFYRESMYQPMEDDHQLYQLKPMNCPFHVLVYQ 343 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 ++SYR LP + ++ +R E+ G+MR R F DA+ F + + Sbjct: 344 GRLRSYRELPIRWAELGTVYRHEMSGALHGLMRVRGFTQDDAHIFCREEQIENE-ILGIL 402 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L + G + + P + D + + Sbjct: 403 DLTLEMLAAFGFDRYEIDLSTRPEKS-----------------VGPEAIWDQATQALRSA 445 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 D ++ E A Y D+ K+ D++ + S ++ F ++++ Sbjct: 446 LDKKGLDYAVDEGGGAFYGPKIDI---KIEDAIGRKWQCSTVQLD----FNLPERFAMEY 498 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + + + +G++ V+ ++ +P +AP ++ +++I Sbjct: 499 VAE---DGARHRPIMIHRAVLGSLERFFGVLIEHYE---GKFPPWLAPIQVVVMSITDRQ 552 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + ++ + G D E+IG + L P +++G + V++ V + Sbjct: 553 EG---YARQVEETMKNKGFRSLLDLRNEKIGFKIREHTLRRIPYLLVIGDREVANQTVAV 609 Query: 419 KHRLTGIREDMSLEEVINYAS 439 + R + MSL+ + + S Sbjct: 610 RTRYSQDLGVMSLDAFMEHLS 630 >gi|229011636|ref|ZP_04168819.1| Threonyl-tRNA synthetase [Bacillus mycoides DSM 2048] gi|228749594|gb|EEL99436.1| Threonyl-tRNA synthetase [Bacillus mycoides DSM 2048] Length = 639 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 76/447 (17%), Positives = 155/447 (34%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + +Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 231 KLEEYLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQ 288 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N E+ P + + +LW +SG + Y M ++ + K+ P + +F++ Sbjct: 289 NEYNYQEVRTPFMMNQELWEKSGHWGHYKDNM-YFSEVDHKSFALKPMNCPGHMLMFKNK 347 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP + R E G++R R F DA+ +TPE + + Sbjct: 348 LHSYRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVLAQ 406 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++ G E+ V T + + Sbjct: 407 IDYVYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAELALENVLQ 448 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + E A Y D H + D+L + + ++ F K+ Sbjct: 449 SLNYKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTVQLD----FQMPEKFD----L 497 Query: 301 TFKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + + + + +G++ A++ G W + + I + Sbjct: 498 NYIDENNEKRRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNA 552 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 V +I +L++ G V D E++G + A + P +++G K + V ++ Sbjct: 553 VHEQYINRIADKLAQAGIRVERDIRDEKLGYKIREAQMQKVPYVLVIGDKEMESEAVNVR 612 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 E + L+ + N + Sbjct: 613 KYGEEKSEVVELDAFVESMKEEIKNRK 639 >gi|94993836|ref|YP_601934.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10750] gi|123080137|sp|Q1J7X1|SYT_STRPF RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|94547344|gb|ABF37390.1| Threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10750] Length = 647 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 86/449 (19%), Positives = 164/449 (36%), Gaps = 38/449 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L L+E RD +L L MI + +G+ WLP G + I +++ Sbjct: 227 KAYLTRLEEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPDGATIRRTLERYITDKEL 284 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M + D D + + P + ++++H Sbjct: 285 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPVMDMGDGEEFVLRPMNCPHHIQVYKNH 344 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP ++ + R E G+ R RE + D + F TPE + + + Sbjct: 345 VRSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFV-TPEQIQEEFRRALQL 403 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSENTDF 239 + ++ L R D +T + + + + Sbjct: 404 IIDVYADFNLTDYRFRLS--------------YRDPNDTHKYYDNDEMWENAQSMLKAAL 449 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 450 DEMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD---- 498 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GADG++H M G+ + I + I ++ Sbjct: 499 LKYIGADGEEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQV----TVIPISNE 554 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L G DD E++ + + P Q+IVG K + D V ++ Sbjct: 555 AHIDYAWEVAKTLRDRGVRADVDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVR 614 Query: 420 HRLTGIREDMSLEEVINYASHRF-SNNRP 447 + S+EE + +RP Sbjct: 615 RYGSKATHTESVEEFVENILADIARKSRP 643 >gi|307707001|ref|ZP_07643798.1| threonyl-tRNA synthetase [Streptococcus mitis SK321] gi|307617527|gb|EFN96697.1| threonyl-tRNA synthetase [Streptococcus mitis SK321] Length = 647 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 77/444 (17%), Positives = 158/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVDKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYEDFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QVKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + + + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +S+++ + +N Sbjct: 619 AQKETQTVSVDDFVQAILADIANK 642 >gi|239814876|ref|YP_002943786.1| threonyl-tRNA synthetase [Variovorax paradoxus S110] gi|259516786|sp|C5CUU2|SYT_VARPS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|239801453|gb|ACS18520.1| threonyl-tRNA synthetase [Variovorax paradoxus S110] Length = 635 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 80/443 (18%), Positives = 140/443 (31%), Gaps = 38/443 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L I + + G+ W P G V +R T Sbjct: 230 QYIQRIEEAEKRDHRKLGKELDLF--HIDEVAPGVVFWHPKGWALWQAVEQYMRGIYRDT 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + LW ++G + +Y M + + P + IF+S ++S Sbjct: 288 GYWEVKGPQILDKSLWEKTGHWQNYRDNMFT-TESEKREYALKPMNCPGHVLIFKSDLRS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + + R+E G+MR R F D + F + + + Sbjct: 347 YRDLPLRYGEFGQCHRNEPSGALHGIMRVRGFTQDDGHIFCTEDQILEECVAYTAQ-LQK 405 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G I + + P S E A+ + Sbjct: 406 VYADFGFTEILYKVATRPDNRVGSDELWDKAEHAVMEALRRS-----------------G 448 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I A Y + L D+L + ++ G +Y Sbjct: 449 VDFIISPGDGAFYGPKIEY---TLKDALGRQWQCGTMQVDFNTAERLGGEY-------VT 498 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 G+ H V + +G++ ++ H G W + + + D Sbjct: 499 ETSGRAHPVMLHRAIVGSLERFIGMLIEHHAGALPAW------LAPVQVAVLNISEGQAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + L G V D E+I + L P ++VG K V ++ R Sbjct: 553 YAASVAKTLQNQGLRVQLDLHNEKITYKIRKHSLQKLPYILVVGDKEREAGAVAVRARGN 612 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 MSLE + ++ R Sbjct: 613 QDLGAMSLESFVQRLVQDVADKR 635 >gi|325690794|gb|EGD32795.1| threonine--tRNA ligase [Streptococcus sanguinis SK115] Length = 647 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 152/445 (34%), Gaps = 32/445 (7%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 KY + RD +L L MI + +G+ WLP G + I +++ Sbjct: 228 LKKYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATVRRELERYIVDKE 285 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRS 120 +G + P L S +L+ SG ++ Y ++M D D + + P + +++ Sbjct: 286 LASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKH 345 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SYR LP +I + R E ++ + + +TPE + + + Sbjct: 346 HVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQL 405 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + ++ L R + D E + D Sbjct: 406 IIDVYADFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALD 452 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 453 EMDVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD----L 501 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + GADG++H M G+ + I + + + I ++ Sbjct: 502 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEA 557 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ +L G D+ E++ + + P Q+IVG K V D V ++ Sbjct: 558 HIDYAWQVAKKLRDKGVRADVDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVRR 617 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 + ++E + +N Sbjct: 618 YGQKETHTIPVDEFVEQILADIANK 642 >gi|332290253|ref|YP_004421105.1| threonyl-tRNA synthetase [Gallibacterium anatis UMN179] gi|330433149|gb|AEC18208.1| threonyl-tRNA synthetase [Gallibacterium anatis UMN179] Length = 643 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 72/445 (16%), Positives = 142/445 (31%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LAEYLKRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRAKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + LW ++G + +Y +++ ++ P + IF + Sbjct: 287 QYDYQEVKGPFMMDRVLWEKTGHWQNY-GDLMFTTSSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + Sbjct: 346 KSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TENQIESEVTSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G I ++ + P S E D + Sbjct: 405 YDIYSTFGFTDIYVKLSTRPEHRIGSDE-----------------MWDRAEADLAKALEH 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y + L DS+ + ++ +A+ Sbjct: 448 NGLEYEVQPGEGAFYGPKLEF---ALRDSIGREWQCGTVQLDFALPGRL--------NAS 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + + +G++ +I + G W +++ Sbjct: 497 YVAEDNERKTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPTQAVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D + + LS G V D E+IG + L P ++ G K +++ KV ++ Sbjct: 551 QADYVQNVVKTLSDAGLRVKSDLRNEKIGFKIREHTLKRVPYMLVCGDKEIAEGKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R ++EE ++ N Sbjct: 611 RKGADLGTFTVEEFTEILKNQVRNR 635 >gi|229079560|ref|ZP_04212097.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-2] gi|228703729|gb|EEL56178.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-2] Length = 640 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 155/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 KYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TP+ + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPKQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + + +G++ A++ G W + + I + V Sbjct: 501 DENNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHE 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +I +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYANEIAHKLAQAGVRVEQDARDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E ++L+ + N + Sbjct: 616 EEKSEVIALDVFVATIEEEIKNRK 639 >gi|327439263|dbj|BAK15628.1| threonyl-tRNA synthetase [Solibacillus silvestris StLB046] Length = 643 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 167/442 (37%), Gaps = 32/442 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K+ L +L+E RD +L L +G+ WLP G + I +++ Sbjct: 232 KHHLQMLEEAKERDHRKIGKELDLFMT-SQTVGQGLPLWLPNGATIRRTIERYIVDKELS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P L S L+ SG ++ Y M + +++ ++ P + +F++ + Sbjct: 291 LGYKHVYTPVLGSKKLYETSGHWEHYQDGMFPPMEMDNETLVLRPMNCPHHMMVFKNGLH 350 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR+LP ++ R E+ ++ + + + P+ K + K+ L Sbjct: 351 SYRHLPIRIAELGTMHRYEMSGAVSGLQRVRGMTLNDAHIFVRPDQIKAEFKKVVELILE 410 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK-DFMDFPIPSENTDFDDI 242 ++ LK R D T+ + + D++ Sbjct: 411 VYKDFDLKDFSFRLS--------------YRDPNNTEKYFDDDQMWETAQAMLKEAMDEL 456 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I E A Y DV ++ ++ + + +S ++ F ++ ++ Sbjct: 457 GYDYFIAEDEAAFYGPKLDV---QVKTAIGKEETLSTAQLD----FLLPQRFD----LSY 505 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG+ + G + + + + +P +AP + ++I + + V Sbjct: 506 IGEDGQPQRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQATIIPV--SNAVHY 561 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D ++ +L+ G V DD E++G + A + P +++G K V+++ V I+ Sbjct: 562 DYAREVQEKLAAAGIRVEMDDREEKLGYKIREAQMQKIPYMLVLGDKEVAENAVNIRRYG 621 Query: 423 TGIREDMSLEEVINYASHRFSN 444 + E +S E+ + + Sbjct: 622 SKDSETISFEQFLADITAEVKK 643 >gi|21909901|ref|NP_664169.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS315] gi|28896400|ref|NP_802750.1| threonyl-tRNA synthetase [Streptococcus pyogenes SSI-1] gi|25453285|sp|Q8K8C0|SYT_STRP3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|21904088|gb|AAM78972.1| putative threonyl-tRNA synthetase [Streptococcus pyogenes MGAS315] gi|28811651|dbj|BAC64583.1| putative threonyl-tRNA synthetase 1 [Streptococcus pyogenes SSI-1] Length = 647 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 85/449 (18%), Positives = 164/449 (36%), Gaps = 38/449 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L L+E RD +L L MI + +G+ WLP G + I +++ Sbjct: 227 KAYLTRLEEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPDGATIRRTLERYITDKEL 284 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M + D D + + P + ++++H Sbjct: 285 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPVMDMGDGEEFVLRPMNCPHHIQVYKNH 344 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP ++ + R E G+ R RE + D + F TPE + + + Sbjct: 345 VRSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFV-TPEQIQEEFQRALQL 403 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSENTDF 239 + ++ L R D +T + + + + Sbjct: 404 IIDVYADFNLTDYRFRLS--------------YRDPNDTHKYYDNDEMWENAQSMLKAAL 449 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 450 DEMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD---- 498 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GADG++H M G+ + I + I ++ Sbjct: 499 LKYIGADGEEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQV----TVIPISNE 554 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L G DD E++ + + P Q+IVG K + + V ++ Sbjct: 555 AHIDYAWEVAKTLRDRGVRADVDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEEKSVNVR 614 Query: 420 HRLTGIREDMSLEEVINYASHRF-SNNRP 447 + S+EE + +RP Sbjct: 615 RYGSKATHTESVEEFVENILADIARKSRP 643 >gi|209558991|ref|YP_002285463.1| threonyl-tRNA synthetase [Streptococcus pyogenes NZ131] gi|238065119|sp|B5XKA6|SYT_STRPZ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|209540192|gb|ACI60768.1| Threonyl-tRNA synthetase [Streptococcus pyogenes NZ131] Length = 647 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 85/449 (18%), Positives = 164/449 (36%), Gaps = 38/449 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L L+E RD +L L MI + +G+ WLP G + I +++ Sbjct: 227 KAYLTRLEEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPDGATIRRTLERYITDKEL 284 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M + D D + + P + ++++H Sbjct: 285 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPVMDMGDGEEFVLRPMNCPHHIQVYKNH 344 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP ++ + R E G+ R RE + D + F TPE + + + Sbjct: 345 VRSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFV-TPEQIQEEFQRALQL 403 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSENTDF 239 + ++ L R D +T + + + + Sbjct: 404 IIDVYADFNLTDYRFRLS--------------YRDPNDTHKYYDNDEMWENAQSMLKAAL 449 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 450 DEMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD---- 498 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GADG++H M G+ + I + I ++ Sbjct: 499 LKYIGADGEEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQV----TVIPISNE 554 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L G DD E++ + + P Q+IVG K + D V ++ Sbjct: 555 AHIDYAWEVAKILRDRGVRADVDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVR 614 Query: 420 HRLTGIREDMSLEEVINYASHRF-SNNRP 447 + S+E+ + +RP Sbjct: 615 RYGSKATHTESVEDFVENILADIARKSRP 643 >gi|301053905|ref|YP_003792116.1| threonyl-tRNA synthetase [Bacillus anthracis CI] gi|300376074|gb|ADK04978.1| threonyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI] Length = 639 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 71/444 (15%), Positives = 155/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ ++L L M + + G+ +LP GQ + + +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGNELELF--MFSEEAPGMPFYLPKGQIIRNELEVFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TPE + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G + + + P E + S + Sbjct: 410 VYKTFGFEYE-VELSTRPEDSMGDDE-----------------LWEQAEASLENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + I + V Sbjct: 501 DEKNEKRRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHV 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++ +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYADEVADKLTQAGVRVERDMRDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 + L+ + +N + Sbjct: 616 EEKSGVIELDMFVESMKEEINNRK 639 >gi|260914069|ref|ZP_05920542.1| threonine-tRNA ligase [Pasteurella dagmatis ATCC 43325] gi|260631702|gb|EEX49880.1| threonine-tRNA ligase [Pasteurella dagmatis ATCC 43325] Length = 644 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 73/443 (16%), Positives = 142/443 (32%), Gaps = 40/443 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LSEYLTRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + LW ++G + +Y +++ ++ P + IF + Sbjct: 287 EYDYQEVKGPFMMDRVLWEKTGHWQNY-GDLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G ++I ++ + P + E + Sbjct: 405 YDIYSTFGFENIQVKLSTRPEKRIGADE-----------------MWERAEAGLAAALAH 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L DSL + ++ +A+ Sbjct: 448 NGLEYEIQEGEGAFYGPKIEF---ALRDSLDREWQCGTIQLDFALPGRL--------NAS 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ +I + G W +++ Sbjct: 497 YVAEDNDRRTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPTQAVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + +K+ LS G V D E+IG + L P ++ G K + KV ++ Sbjct: 551 QSEYVQKVVKTLSDAGLRVKSDLRNEKIGFKIREHTLRRVPYMLVCGDKEIEAGKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R ++EE ++ + Sbjct: 611 RKGADLGTFTIEEFLDILKKQVR 633 >gi|261406470|ref|YP_003242711.1| threonyl-tRNA synthetase [Paenibacillus sp. Y412MC10] gi|261282933|gb|ACX64904.1| threonyl-tRNA synthetase [Paenibacillus sp. Y412MC10] Length = 636 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 88/434 (20%), Positives = 157/434 (36%), Gaps = 39/434 (8%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L M + + G+ +LP G + + R Q E+ P Sbjct: 239 AKKRDHRKLGKELGLF--MFSEEAPGMPFFLPNGMIIRNELEQFARGLQFHRDYDEVRTP 296 Query: 73 TLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + + LW SG +D Y M ++ P + ++++ + SYR LP Sbjct: 297 LMMNKRLWEMSGHWDHYKDNM-YFTQVDETEYALKPMNCPGHMLVYKNSLHSYRELPIRI 355 Query: 133 YQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 + R E G+MR R F DA+ F + + ++ R++ G + Sbjct: 356 SEFGQVHRHEFSGALNGMMRVRTFCQDDAHIFVRPDQIQEE-IKQVIDFISRVYQVFGFE 414 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ 251 + P S E A+T QV D + I E Sbjct: 415 YTI-ELSTRPEDSMGSEELWEQAETSLQQVL-----------------DQLGLPYRINEG 456 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A Y D H + DSL + + ++ F F K+ ++ G D + H Sbjct: 457 DGAFYGPKIDFH---ILDSLKRSWQCGTIQLD----FQFPEKFD----LSYIGEDNQKHR 505 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + + + I + G +P +AP ++ +I + H D K+ R Sbjct: 506 PVVIHRAV--FGSIERFIGILTEHYGGAFPMWLAPVQVMIIPVSDH---YIDYSLKVKKR 560 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G V D E++G + A LL P +++G K + V ++ R G ++++ Sbjct: 561 LENAGIRVNVDVRNEKLGYKIREAGLLKTPYTLVLGEKEMDSDHVSVRKRGEGELGEIAI 620 Query: 432 EEVINYASHRFSNN 445 ++VI + + Sbjct: 621 DQVIERLRNEIESK 634 >gi|206971420|ref|ZP_03232370.1| threonyl-tRNA synthetase [Bacillus cereus AH1134] gi|228952703|ref|ZP_04114777.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229069894|ref|ZP_04203176.1| Threonyl-tRNA synthetase [Bacillus cereus F65185] gi|206733405|gb|EDZ50577.1| threonyl-tRNA synthetase [Bacillus cereus AH1134] gi|228713297|gb|EEL65190.1| Threonyl-tRNA synthetase [Bacillus cereus F65185] gi|228806979|gb|EEM53524.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 640 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 155/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 KYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TP+ + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPKQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + + +G++ A++ G W + + I + V Sbjct: 501 DENNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHE 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +I +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYANEIAHKLAQAGVRVEQDARDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E ++L+ + N + Sbjct: 616 EEKSEVIALDVFVATIEEEIKNRK 639 >gi|84624684|ref|YP_452056.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|73919845|sp|Q5GXY0|SYT_XANOR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123725509|sp|Q2P0Z5|SYT_XANOM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|84368624|dbj|BAE69782.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 634 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 74/438 (16%), Positives = 138/438 (31%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + + RD L + + + G+ W P G V +R+ +G Sbjct: 232 YILRMEEADKRDHRRIGKAQDLF--HLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D+Y M + + P + +F + SY Sbjct: 290 YGEVRCPQILDVSLWQKSGHWDNYQDAMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F L + L + Sbjct: 349 RDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCL-ESQIESEVTAFHQQALAV 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P D + + Sbjct: 408 YTAFGFDDIQIKIALRPEKR-----------------LGDDATWDKAEAALRSALGVCGV 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + H L D++ ++ ++ G A + Sbjct: 451 EWQELPGEGAFYGPKIEYH---LKDAIGRTWQLGTMQVDFMMPGRLG--------AEYVD 499 Query: 305 AD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + K H V + +G+M ++ H G W V ++ D Sbjct: 500 ENSQKKHPVMLHRAIVGSMERFIGILIEHHAGAFPSWLAPVQVVVANIT------DAQAD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L+ G V D E+IG + L P ++VG + + V ++ R Sbjct: 554 YVDAVRKTLANQGFRVSADLRNEKIGYKIREHTLQRVPYLLVVGDREKENGAVAVRTRSG 613 Query: 424 GIREDMSLEEVINYASHR 441 M++ I Sbjct: 614 EDLGTMTVSAFIERLQAE 631 >gi|157150881|ref|YP_001450077.1| threonyl-tRNA synthetase [Streptococcus gordonii str. Challis substr. CH1] gi|189083628|sp|A8AWB7|SYT_STRGC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157075675|gb|ABV10358.1| threonyl-tRNA synthetase [Streptococcus gordonii str. Challis substr. CH1] Length = 647 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 77/444 (17%), Positives = 156/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVDKEI 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 287 AAGYQHVYTPPLASVELYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYEDFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QVKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + + + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 ++++E + +N Sbjct: 619 GQKETHTVAVDEFVEAILADIANK 642 >gi|325917697|ref|ZP_08179888.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937] gi|325536091|gb|EGD07896.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937] Length = 634 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 74/438 (16%), Positives = 138/438 (31%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + + RD L + + + G+ W P G V +R+ +G Sbjct: 232 YILRMEEADKRDHRRIGKAQDLF--HLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D+Y M + + P + +F + SY Sbjct: 290 YGEVRCPQILDVSLWQKSGHWDNYQDAMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F L + L + Sbjct: 349 RDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCL-ESQIEAEVTAFHQQALAV 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P D + T Sbjct: 408 YTAFGFDDIEIKIALRPEKR-----------------LGDDGTWDKAEAALRTALGVCGV 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + H L D++ ++ ++ G A + Sbjct: 451 EWQELPGEGAFYGPKIEYH---LKDAIGRTWQLGTMQVDFMMPGRLG--------AEYVD 499 Query: 305 AD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + K H V + +G+M ++ H G W V ++ D Sbjct: 500 ENSQKKHPVMLHRAIVGSMERFIGILIEHHAGAFPSWLAPVQVVVANIT------DAQAD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L+ G V D E+IG + L P ++VG + + V ++ R Sbjct: 554 YVDSVRKTLANQGFRVNADLRNEKIGYKIREHTLQRVPYLLVVGDREKENGAVAVRTRSG 613 Query: 424 GIREDMSLEEVINYASHR 441 M++ + Sbjct: 614 EDLGTMTVSAFVERLQAE 631 >gi|325274563|ref|ZP_08140621.1| prolyl-tRNA synthetase [Pseudomonas sp. TJI-51] gi|324100290|gb|EGB98078.1| prolyl-tRNA synthetase [Pseudomonas sp. TJI-51] Length = 571 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 118/237 (49%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + + V A++REE Sbjct: 1 MRTSQYLLATQKETPADAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P++Q A+LW ESGR++ YG E+LRL DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPSIQPAELWQESGRWEQYGPELLRLKDRHQRDFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M + Sbjct: 121 ELSSYKQLPLNMYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQETYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF RLGL P++A++G IGG SHEF VLA++GE V S D+ E Sbjct: 181 YSNIFTRLGLDFRPVQADTGSIGGSYSHEFHVLAESGEDDVIFSDS-SDYAANIEKA 236 Score = 162 bits (410), Expect = 9e-38, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 114/207 (55%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ + + RGIEVGHIF GTKYS + Sbjct: 364 DDKHYFGVNWERDLPVPQVADLRNVVEGDPSPDGQGTLIIKRGIEVGHIFQLGTKYSEAL 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK + MG YGIG RVVAA IE S+D KGIIW D++APF+I+L+ ++ Sbjct: 424 KCQVLGENGKPVVLSMGCYGIGVSRVVAAAIEQSYDDKGIIWNDALAPFQIALVPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + R+A +K+YA L+ G +V DD + G +FA +L+G P +++V + +++ + Sbjct: 484 EAVREATDKLYAELTAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNL 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E KHR + + L EV+ + R Sbjct: 544 EYKHRTEQDAQPLPLNEVLTFLQARVR 570 >gi|212711437|ref|ZP_03319565.1| hypothetical protein PROVALCAL_02510 [Providencia alcalifaciens DSM 30120] gi|212685893|gb|EEB45421.1| hypothetical protein PROVALCAL_02510 [Providencia alcalifaciens DSM 30120] Length = 653 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 69/443 (15%), Positives = 140/443 (31%), Gaps = 40/443 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + RD +L L + + + G+ W G + +R + Sbjct: 243 YLLRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMAFWHNDGWTIFRELETFVRTKLKSYN 300 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +G +++Y M ++ P + IF +KSY Sbjct: 301 YQEVKGPFMMDRVLWERTGHWENYKDAMFT-TSSENREYCVKPMNCPGHVQIFNQGLKSY 359 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + + Sbjct: 360 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQILGE-VTSCIEMIYDV 418 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P + D D Sbjct: 419 YSTFGFEKIVVKLSTRPEKR-----------------IGTDDMWDTAEADLANALKSKGI 461 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F+ + ++A++ G Sbjct: 462 EFEYQPGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FFLPGR----LNASYVG 510 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + +G++ ++ + G W +++ D Sbjct: 511 ENNERITPVMIHRAVLGSLERFIGILTEEYAGFFPTWLAPQQVVVMNIT------DSQAD 564 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ ++L VG D E+IG + L P ++ G K V KV ++ R Sbjct: 565 YVQELVSKLQSVGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGEKEVESGKVSVRTRRG 624 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 + + E + + Sbjct: 625 KDLGSLDVNEFTTKLLEEIRSRQ 647 >gi|47565742|ref|ZP_00236782.1| threonyl-tRNA synthetase [Bacillus cereus G9241] gi|47557378|gb|EAL15706.1| threonyl-tRNA synthetase [Bacillus cereus G9241] Length = 639 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 72/444 (16%), Positives = 152/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ + K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDHKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TPE + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMKQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G + + + P + + + Sbjct: 410 VYKIFGFQYE-VELSTRPEDS-----------------MGDDKLWEQAESALANVLHSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + I + V Sbjct: 501 DEKNEKRRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHV 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 ++I +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYADEIADKLAQAGVRVERDVRDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E + L + N + Sbjct: 616 EEKSEVIELNGFVESIKEEIKNKK 639 >gi|85711636|ref|ZP_01042693.1| threonyl-tRNA synthetase [Idiomarina baltica OS145] gi|85694496|gb|EAQ32437.1| threonyl-tRNA synthetase [Idiomarina baltica OS145] Length = 638 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 79/448 (17%), Positives = 148/448 (33%), Gaps = 41/448 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E RD L + + G+ W G + +RE+ Sbjct: 227 KQLKAYLQRLEEAEKRDHRKIGKAQDLF--HWQEEAPGMVFWHHNGWTIFRELEDFVREK 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 E+ P + LW +SG ++ + +++ ++ P + IF Sbjct: 285 LREYQYQEVKGPMMMDRVLWEKSGHWEKF-SDLMFTTSSENREYAVKPMNCPGHVQIFNQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 344 GLKSYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHVFC-TEDQVQDEVAACIK 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + G I ++ + P D + Sbjct: 403 MVYETYETFGFDKIDVKLSTRPEKR-----------------LGDDATWDRSEKALADAL 445 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + A Y + LFD L + ++ + Sbjct: 446 KAHDIDFTYLPGEGAFYGPKIEF---TLFDCLGRAWQCGTIQLDFALPGRL--------N 494 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 AT+ G D H + +G++ ++ + +P +AP ++ L+NI + Sbjct: 495 ATYVGEDNDRHTPVMIHRAILGSLERFMGILI---EEYAGNFPLWLAPTQVVLMNITDN- 550 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 RD K+ L++ G D E+IG + L P ++VG K V +V + Sbjct: 551 --QRDYVNKVVKSLNEKGIRASADLRNEKIGFKIREHTLKRVPYLLVVGDKEVEAGEVAV 608 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNNR 446 + R LE+ + + Sbjct: 609 RTRSGEDLGKFPLEQFVEQLQAEVRTRK 636 >gi|324993844|gb|EGC25763.1| threonine--tRNA ligase [Streptococcus sanguinis SK405] gi|324994835|gb|EGC26748.1| threonine--tRNA ligase [Streptococcus sanguinis SK678] gi|325687276|gb|EGD29298.1| threonine--tRNA ligase [Streptococcus sanguinis SK72] gi|325696135|gb|EGD38026.1| threonine--tRNA ligase [Streptococcus sanguinis SK160] gi|327474719|gb|EGF20124.1| threonine--tRNA ligase [Streptococcus sanguinis SK408] Length = 647 Score = 255 bits (650), Expect = 2e-65, Method: Composition-based stats. Identities = 73/445 (16%), Positives = 151/445 (33%), Gaps = 32/445 (7%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 KY + RD +L L MI + +G+ WLP G + I +++ Sbjct: 228 LKKYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATVRRELERYIVDKE 285 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRS 120 +G + P L S +L+ SG ++ Y ++M D D + + P + +++ Sbjct: 286 LASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKH 345 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SYR LP +I + R E ++ + + +TPE + + + Sbjct: 346 HVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQL 405 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + ++ L R + D E + D Sbjct: 406 IIDVYADFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALD 452 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 453 EMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD----L 501 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + GADG++H M G+ + I + + + I ++ Sbjct: 502 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEA 557 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ +L G D+ E++ + + P Q+IVG K D V ++ Sbjct: 558 HIDYAWQVAKKLRDKGVRADVDERNEKMQYKIRASQTSKIPYQLIVGDKEAEDGTVNVRR 617 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 + ++E + ++ Sbjct: 618 YGQKETHTIPVDEFVEQILADIASK 642 >gi|117619295|ref|YP_858106.1| prolyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|152074744|sp|A0KPA5|SYP_AERHH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|117560702|gb|ABK37650.1| prolyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 574 Score = 255 bits (650), Expect = 2e-65, Method: Composition-based stats. Identities = 121/235 (51%), Positives = 159/235 (67%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAEI SH+LMLR GMI + + G+Y+WLP G + L + I+REE Sbjct: 1 MRTSQYLLSTLKETPSDAEIVSHQLMLRAGMIRKLASGMYAWLPSGLRVLKKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q A+LW ESGR+D YG E+ RL DR+++ + GPTHEEV+T + R Sbjct: 61 MNNAGAIEVSMPVVQPAELWQESGRWDDYGPELCRLTDRHNRPFVLGPTHEEVITSLVRY 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR REFLMKDAYSF + +Y +M + Sbjct: 121 EVNSYKQLPLNLYQIQTKFRDEVRPRFGVMRGREFLMKDAYSFHIDKASLIETYERMHAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y F R+GL P++A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCAAFTRMGLNFRPVQADTGSIGGTGSHEFQVLAESGEDLIAFSDT-SDYAANIE 234 Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats. Identities = 67/188 (35%), Positives = 108/188 (57%), Gaps = 3/188 (1%) Query: 258 ATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D + K + RGIEVGHIF GTKYS M A+ GK ++MG Sbjct: 385 EVADLRNVVEGDPSPCGQGKLLLKRGIEVGHIFQLGTKYSEAMKASVLNEGGKSVTMEMG 444 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSK 374 YGIG R+VAA IE ++D GIIWP+++APF+++++ + + + ++ YA L Sbjct: 445 CYGIGVSRLVAAAIEQNNDQYGIIWPEAIAPFEVAIVPMNMHKSERVAEQAQQFYAELKA 504 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV +DD E+ G FA +LLG P +++G + + + VE K R TG ++++++ E+ Sbjct: 505 AGVDVLFDDRKERPGVMFADMELLGVPHAIVIGDRGLDNGVVEYKCRRTGEKQEVAISEI 564 Query: 435 INYASHRF 442 + + Sbjct: 565 VALLKAKL 572 >gi|262282640|ref|ZP_06060408.1| threonyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA] gi|262261931|gb|EEY80629.1| threonyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA] Length = 647 Score = 255 bits (650), Expect = 2e-65, Method: Composition-based stats. Identities = 77/444 (17%), Positives = 156/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVDKEI 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 287 AAGYQHVYTPPLASVELYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYEDFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QVKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + + + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 ++++E + +N Sbjct: 619 GQKETHTVAVDEFVEAILADIANK 642 >gi|146283154|ref|YP_001173307.1| prolyl-tRNA synthetase [Pseudomonas stutzeri A1501] gi|166980144|sp|A4VNB4|SYP_PSEU5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|145571359|gb|ABP80465.1| prolyl-tRNA synthetase [Pseudomonas stutzeri A1501] Length = 571 Score = 255 bits (650), Expect = 2e-65, Method: Composition-based stats. Identities = 123/237 (51%), Positives = 167/237 (70%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L L+E P DA + SH+LMLR GMI + + G+Y+W+P+G +AL AI+REE Sbjct: 1 MRTSQFLLSTLKETPSDAVVISHQLMLRAGMIRKLASGLYTWMPMGLRALRKAEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A+LW ESGR++ YG E+LRL DR+D+ GPTHEEV+TD+ R+ Sbjct: 61 MNKAGALEVLMPAIQPAELWQESGRWEQYGPELLRLKDRHDREFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFG+MR REFLMKDAYSF L E + +Y++M + Sbjct: 121 ELNSYKQLPINFYQIQTKFRDEIRPRFGLMRGREFLMKDAYSFHLNQESLQETYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF RLGL P++A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCNIFTRLGLNFRPVQADTGSIGGTGSHEFHVLAESGEDDIAFSDS-SDYAANIEKA 236 Score = 167 bits (424), Expect = 3e-39, Method: Composition-based stats. Identities = 73/192 (38%), Positives = 116/192 (60%), Gaps = 4/192 (2%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K V RGIEVGHIF GTKYS M+ G +GK + Sbjct: 378 PLPQVADLRNVVAGDPSPDGKGSLVIKRGIEVGHIFQLGTKYSEAMNCQVMGENGKPATL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE ++D +GI+WPD++APF+I+L+ +K + R+A +K+YA L Sbjct: 438 IMGCYGIGVSRVVAAAIEQNYDERGILWPDALAPFQIALVPMKYETEAVREATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD + G +FA +L+G P +++V + ++D +E KHR + ++ Sbjct: 498 TAAGYEVLLDDRDKKTSPGVKFADMELIGIPHRIVVSDRGLADGMLEYKHRRDAQPQQVA 557 Query: 431 LEEVINYASHRF 442 + +++++ + R Sbjct: 558 VSDILSFINSRV 569 >gi|196040031|ref|ZP_03107334.1| threonine--tRNA ligase [Bacillus cereus NVH0597-99] gi|196029290|gb|EDX67894.1| threonine--tRNA ligase [Bacillus cereus NVH0597-99] Length = 639 Score = 255 bits (650), Expect = 2e-65, Method: Composition-based stats. Identities = 72/444 (16%), Positives = 155/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ ++L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGNELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TPE + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G K + + P + S + Sbjct: 410 VYKTFGFKYE-VELSTRPEDS-----------------MGDDKLWEQAEASLENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + I + V Sbjct: 501 DEKNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHV 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++ +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYADEVADKLAQAGVRVERDMRDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 + L+ + +N + Sbjct: 616 EEKSGVIELDMFVESMKEEINNRK 639 >gi|82524022|emb|CAI78700.1| Threonyl-tRNA synthetase [uncultured Flavobacteriaceae bacterium] Length = 644 Score = 255 bits (650), Expect = 2e-65, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 156/443 (35%), Gaps = 37/443 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + +G+ WLP G + + +++ Q + G Sbjct: 229 YLNLLEEAKKRDHRKLGKELELFA-FSKKVGQGLPLWLPKGAALRERLEDFLKKAQKKAG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIK 123 + P + +L+V SG Y YG + + + D+ + P + +I+ + Sbjct: 288 YEMVVTPHIGQKELYVTSGHYAKYGADSFQPIKTPKEDEEFLLKPMNCPHHCEIYNNSQW 347 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP + + +R E G+ R R F DA+ F + + + + + L Sbjct: 348 SYKDLPKRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCMPEQLDQE-FKNVIDLVL 406 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +F LG ++ + V + + + + D Sbjct: 407 YVFGSLGFENFTAQVS-------------VRDPENPDKYIGEVENWEKAEQAIINAAKDK 453 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 IVE A Y D + D+L ++ ++ T+ Sbjct: 454 GLDFVIVEGEAAFYGPKLDFM---VKDALGRKWQLGTIQVDYNLP--------ERFDLTY 502 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 KG+D + H + G++ A++ G +W + + + Sbjct: 503 KGSDNELHRPVMIHRAPFGSIERFIAILLEHTAGNFPLWLMPKQAIILCI------SEKY 556 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 EK+ L D+ E IG + A++ +P +I+G S++K+ ++ Sbjct: 557 EKYAEKVLNLLENNEIRALVDNRNETIGKKIREAEMQKYPYMIIIGENEESENKISVRQH 616 Query: 422 LTGIREDMSLEEVINYASHRFSN 444 +S+E S Sbjct: 617 GGEDLGLISIETFSEVIKSEISK 639 >gi|24379968|ref|NP_721923.1| threonyl-tRNA synthetase [Streptococcus mutans UA159] gi|73919830|sp|Q8DT12|SYT_STRMU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|24377953|gb|AAN59229.1|AE014990_3 putative threonyl-tRNA synthetase [Streptococcus mutans UA159] Length = 649 Score = 255 bits (650), Expect = 2e-65, Method: Composition-based stats. Identities = 81/449 (18%), Positives = 160/449 (35%), Gaps = 38/449 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L L+E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KSYLKRLEEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPDGATIRRIIERYITDKEV 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSH 121 +G + P + S DL+ SG +D Y ++M D D + P + +++++H Sbjct: 287 ASGYQHVYTPPIASVDLYKTSGHWDHYREDMFPTMDMGDGESFVLRPMNCPHHIEVYKNH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP ++ + R E ++ + + + + + + + Sbjct: 347 VHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVEDEFKRTLQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFD 240 + ++ L R D +T + D + D Sbjct: 407 IDVYEDFNLTDYSFRLS--------------YRDPNDTHKYFDDDEMWEKSQTMLKAAMD 452 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ E A Y D+ ++ +L ++ +S ++ F ++ Sbjct: 453 DMGLDYYEAEGEAAFYGPKLDI---QVKTALGNDETLSTIQLD----FLLPERF----EL 501 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 T+ GADG++H + + M A + ++ G W I ++ Sbjct: 502 TYIGADGEEHRPVMIHRGIVSTMERFTAYLIETYKGAFPTWLAPHQVT-----VIPISNE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L G DD E++ + + P Q+IVG K V + V ++ Sbjct: 557 AHIDYAWEVAKELRDHGIRADVDDRNEKMQYKIRQSQTKKVPYQLIVGDKEVENGTVNVR 616 Query: 420 HRLTGIREDMSLEEV-INYASHRFSNNRP 447 + S+ E N + +RP Sbjct: 617 RYGSKQTHTESIAEFRENILADIKRKSRP 645 >gi|332362439|gb|EGJ40239.1| threonine--tRNA ligase [Streptococcus sanguinis SK1056] Length = 654 Score = 255 bits (650), Expect = 2e-65, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 152/445 (34%), Gaps = 32/445 (7%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 KY + RD +L L MI + +G+ WLP G + I +++ Sbjct: 235 LKKYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATVRRELERYIVDKE 292 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRS 120 +G + P L S +L+ SG ++ Y ++M D D + + P + +++ Sbjct: 293 LASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKH 352 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SYR LP +I + R E ++ + + +TPE + + + Sbjct: 353 HVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQL 412 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + ++ L R + D E + D Sbjct: 413 IIDVYADFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALD 459 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 460 EMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD----L 508 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + GADG++H M G+ + I + + + I ++ Sbjct: 509 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEA 564 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ +L G D+ E++ + + P Q+IVG K V D V ++ Sbjct: 565 HIDYAWQVAKKLRDKGVRADVDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVRR 624 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 + ++E + ++ Sbjct: 625 YGQKETHTIPVDEFVEQILADIASK 649 >gi|154687027|ref|YP_001422188.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42] gi|166223321|sp|A7Z7I1|SYT_BACA2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|154352878|gb|ABS74957.1| ThrS [Bacillus amyloliquefaciens FZB42] Length = 643 Score = 255 bits (650), Expect = 2e-65, Method: Composition-based stats. Identities = 82/432 (18%), Positives = 159/432 (36%), Gaps = 32/432 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L + +G+ WLP G + I +++ G Sbjct: 235 LRMLEEAKERDHRKLGKELKLFAN-SQKVGQGLPLWLPKGATIRRVIERYIVDKELSLGY 293 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S DL+ SG +D Y M + +++ ++ P + I++ I SYR Sbjct: 294 EHVYTPVLGSKDLYETSGHWDHYQDTMFPPMEMDNETLVLRPMNCPHHMMIYKQDIHSYR 353 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K + + ++ Sbjct: 354 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEEFIRTVRLIQDVYE 413 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIISL 245 GL R D +T+ + D M S D++ Sbjct: 414 DFGLNDYTFRLS--------------YRDPEDTEKYFDDDEMWNKAQSMLKAAMDEMGHD 459 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y DV ++ ++ + + +S ++ F ++ T+ G Sbjct: 460 YYEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LTYVGE 508 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DGK H + G + + + + P +AP + +I + V D Sbjct: 509 DGKQHRPVVIHR--GVVSTMERFVAFLIEEHKGALPTWLAPVQFQVIPVSP--SVHLDYA 564 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +K+ RL + G V D E+IG + A + P ++VG + + V ++ Sbjct: 565 KKVQERLQREGLRVELDSRDEKIGYKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQK 624 Query: 426 REDMSLEEVINY 437 E +SL++ + Sbjct: 625 SETVSLDDFVKK 636 >gi|145297802|ref|YP_001140643.1| prolyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida A449] gi|166980094|sp|A4SJ23|SYP_AERS4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|142850574|gb|ABO88895.1| prolyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida A449] Length = 574 Score = 255 bits (650), Expect = 2e-65, Method: Composition-based stats. Identities = 120/235 (51%), Positives = 159/235 (67%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L + I+REE Sbjct: 1 MRTSQYLLSTLKETPSDAEVVSHQLMLRAGMIRKLASGMYAWLPSGLRVLKKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q A+LW ESGR+D YG E+ RL DR+++ + GPTHEEV+T + R Sbjct: 61 MNNAGAIEVSMPVVQPAELWQESGRWDDYGPELCRLTDRHNRPFVLGPTHEEVITSLVRY 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR REFLMKDAYSF + +Y +M + Sbjct: 121 EVNSYKQLPLNLYQIQTKFRDEVRPRFGVMRGREFLMKDAYSFHIDKASLIETYERMHAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y F R+GL P++A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCAAFTRMGLNFRPVQADTGSIGGTGSHEFQVLAESGEDLIAFSDT-SDYAANIE 234 Score = 181 bits (460), Expect = 2e-43, Method: Composition-based stats. Identities = 67/188 (35%), Positives = 108/188 (57%), Gaps = 3/188 (1%) Query: 258 ATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D + K + RGIEVGHIF GTKYS M A+ GK ++MG Sbjct: 385 EVADLRNVVEGDPSPCGQGKLLLKRGIEVGHIFQLGTKYSEAMKASVLNEGGKSVTMEMG 444 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSK 374 YGIG R+VAA IE ++D GIIWPD++APF+++++ + + + ++ YA L Sbjct: 445 CYGIGVSRLVAAAIEQNNDQYGIIWPDAIAPFEVAIVPMNMHKSERVAEQAQQFYAELKA 504 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV +DD E+ G FA +LLG P +++G + + + VE K R +G ++++++ E+ Sbjct: 505 AGVDVLFDDRKERPGVMFADMELLGVPHAIVIGDRGLDNGVVEYKCRRSGEKQEVAITEI 564 Query: 435 INYASHRF 442 + + Sbjct: 565 VAMLKAKL 572 >gi|118477787|ref|YP_894938.1| threonyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|229184596|ref|ZP_04311798.1| Threonyl-tRNA synthetase [Bacillus cereus BGSC 6E1] gi|118417012|gb|ABK85431.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|228598913|gb|EEK56531.1| Threonyl-tRNA synthetase [Bacillus cereus BGSC 6E1] Length = 639 Score = 255 bits (650), Expect = 2e-65, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 154/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ ++L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGNELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TPE + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + S + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEASLENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + I + V Sbjct: 501 DEKNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHV 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++ +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYADEVADKLAQAGVRVERDMRDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 + L+ + N + Sbjct: 616 EEKSGVIELDMFVESMKEEIKNRK 639 >gi|332140465|ref|YP_004426203.1| prolyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype'] gi|226731424|sp|B4RV73|SYP_ALTMD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|327550487|gb|AEA97205.1| prolyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype'] Length = 572 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 125/269 (46%), Positives = 170/269 (63%), Gaps = 9/269 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L+ V I+REE Sbjct: 1 MRTSQYLLATQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPSGLRVLNKVANIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLW ESGR++ YG E+LR+ DR+ + + GPTHEEV+T + R+ Sbjct: 61 MNKAGAIEVLMPVVQPADLWEESGRWEEYGPELLRVKDRHQRDFVLGPTHEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQ+Q KFRDE+RPRFG+MR REF MKDAYSF L + +Y KM+ + Sbjct: 121 EISSYKQLPLNLYQVQTKFRDEVRPRFGIMRGREFTMKDAYSFHLEDSCLEETYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R+GL + A+SG IGG+ SHEF VLA++GE + S D D+ E Sbjct: 181 YCAIFSRMGLDFRAVIADSGSIGGNHSHEFHVLAESGEDAIAFSSD-SDYAANVEMAAA- 238 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFD 269 + + P A + + K D Sbjct: 239 -------VAPEKAVPSGADVETKDAKGKD 260 Score = 168 bits (426), Expect = 2e-39, Method: Composition-based stats. Identities = 69/186 (37%), Positives = 102/186 (54%), Gaps = 3/186 (1%) Query: 259 TSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 T D+ N D+ P+ + RGIEVGHIF G KYS M+ GK + MG Sbjct: 387 TVDIRNVVAGDASPDGQGTLDIKRGIEVGHIFQLGRKYSEAMNCGVLSETGKHQTLTMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKV 375 YGIG R+VAA IE +HD GI WPD +APFKI+LI + ++A E +Y L + Sbjct: 447 YGIGVSRIVAAAIEQNHDKFGIKWPDPIAPFKIALIPMNMHKSHRIKEAAEALYEELVAL 506 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V +DD E+ G F +L+G P +++G + + + +VE K+R TG ++ + L Sbjct: 507 GIEVLFDDRKERPGVMFNDMELIGIPHSIVIGERNLDNQQVEYKNRRTGEKQLLDLSAAK 566 Query: 436 NYASHR 441 + + Sbjct: 567 EFVAAL 572 >gi|78048351|ref|YP_364526.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325927169|ref|ZP_08188432.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas perforans 91-118] gi|123743902|sp|Q3BRT7|SYT_XANC5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|78036781|emb|CAJ24474.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325542482|gb|EGD13961.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas perforans 91-118] Length = 634 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 73/438 (16%), Positives = 138/438 (31%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + + RD L + + + G+ W P G V +R+ +G Sbjct: 232 YILRMEEADKRDHRRIGKAQDLF--HLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D+Y M + + P + +F + SY Sbjct: 290 YGEVRCPQILDVSLWQKSGHWDNYQDAMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F L + L + Sbjct: 349 RDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCL-ESQIESEVTAFHQQALAV 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P D + + Sbjct: 408 YTAFGFDDIQIKIALRPEKR-----------------LGDDATWDKAEAALRSALGVCGV 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + H L D++ ++ ++ G A + Sbjct: 451 EWQELPGEGAFYGPKIEYH---LKDAIGRTWQLGTMQVDFMMPGRLG--------AEYVD 499 Query: 305 AD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + K H V + +G+M ++ H G W V ++ + Sbjct: 500 ENSQKKHPVMLHRAIVGSMERFIGILIEHHAGAFPSWLAPVQVVVANIT------DAQAE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L+ G V D E+IG + L P ++VG + + V ++ R Sbjct: 554 YVDSVRKTLANQGFRVSADLRNEKIGYKIREHTLQRVPYLLVVGDREKENGAVAVRTRSG 613 Query: 424 GIREDMSLEEVINYASHR 441 M++ I Sbjct: 614 EDLGTMTVSAFIERLQAE 631 >gi|322411327|gb|EFY02235.1| threonyl-tRNA synthetase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 647 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 82/448 (18%), Positives = 157/448 (35%), Gaps = 36/448 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L L+E RD +L L MI + +G+ WLP G + I +++ Sbjct: 227 KAYLTRLEEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPDGATIRRTLERYITDKEL 284 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG ++ Y ++M + D D + + P + ++++H Sbjct: 285 ASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPVMDMGDGEEFVLRPMNCPHHIQVYKNH 344 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP ++ + R E G+ R RE + D + F + + + Sbjct: 345 VHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIRDE-FKRTLQL 403 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + ++ L R + D E + D Sbjct: 404 IIDVYEDFNLTDYRFRLS-----YRDPEDTHKYYDNDEM--------WENAQAMLKGAMD 450 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 451 DMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD----L 499 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + GADG++H M G+ + I + I ++ Sbjct: 500 KYIGADGEEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQV----TVIPISNEA 555 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +I L G DD E++ + + P Q+IVG K + + V ++ Sbjct: 556 HIDYAWEIAKTLRDRGVRADVDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEEKSVNVRR 615 Query: 421 RLTGIREDMSLEEVINYASHRF-SNNRP 447 + S+E+ + +RP Sbjct: 616 YGSKATHTESVEDFVENILADIARKSRP 643 >gi|197284912|ref|YP_002150784.1| threonyl-tRNA synthetase [Proteus mirabilis HI4320] gi|227355315|ref|ZP_03839716.1| threonyl-tRNA synthetase [Proteus mirabilis ATCC 29906] gi|238693141|sp|B4ETK6|SYT_PROMH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|194682399|emb|CAR42252.1| threonyl-tRNA synthetase [Proteus mirabilis HI4320] gi|227164539|gb|EEI49410.1| threonyl-tRNA synthetase [Proteus mirabilis ATCC 29906] Length = 642 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 70/447 (15%), Positives = 139/447 (31%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E RD +L L + + + G+ W G + +R + Sbjct: 227 KQLKAYLERLEEAAKRDHRKIGKQLDLY--HMQEEAPGMAFWHNDGWTIFRELETFVRCK 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 E+ P + LW ++G +++Y + M ++ P + IF+ Sbjct: 285 LKEYDYQEVKGPFMMDRVLWEKTGHWENYKENMFT-TSSENREYCIKPMNCPGHVQIFKQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 ++SYR+LP + R+E G+MR R F DA+ F + N Sbjct: 344 GLRSYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQILSE-VNNCIK 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + I ++ + P D Sbjct: 403 LIYDVYSTFGFEKIVVKLSTRPEKR-----------------IGEDALWDIAETDLAKAL 445 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D A Y + L+D L + ++ G Sbjct: 446 TDNNIEFEYQPGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLDFSLPGRLG-------- 494 Query: 300 ATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A++ + + V + +G++ ++ + G W +++ Sbjct: 495 ASYVAENNERKVPVMLHRAVLGSLERFIGILTEEYAGFFPTWLAPQQVVVMNIT------ 548 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D +K+ L G D E+IG + L P ++ G K V KV + Sbjct: 549 DGQADYVQKLVKELQDAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAV 608 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R + + + + Sbjct: 609 RTRRGKDLGSIDVNDFKEKLLQEIRSR 635 >gi|213161901|ref|ZP_03347611.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 530 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 142/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 120 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQ 177 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D+Y M ++ P + IF +KSY Sbjct: 178 YQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 236 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 237 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIRDE-VNACIRMVYDM 295 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D ++ Sbjct: 296 YSTFGFEKIVVKLSTRPDKRIGSDE-----------------MWDRAEADLAVALEENNI 338 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F ++ S A++ G Sbjct: 339 PFEYQLGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVG 387 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+M ++ G W V +++ + Sbjct: 388 EDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVVMNIT------DSQSE 441 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E+IG + L P ++ G K V KV ++ R Sbjct: 442 YVNELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRG 501 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + +VI + Sbjct: 502 KDLGSLDVNDVIEKLQQEIRSR 523 >gi|229044114|ref|ZP_04191800.1| Threonyl-tRNA synthetase [Bacillus cereus AH676] gi|229109806|ref|ZP_04239391.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-15] gi|228673651|gb|EEL28910.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-15] gi|228725227|gb|EEL76498.1| Threonyl-tRNA synthetase [Bacillus cereus AH676] Length = 640 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 157/444 (35%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ ++L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEATKRNHRKLGNELELF--MFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TP+ ++ + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPKQIENEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + + +G++ A++ G W + + I + V Sbjct: 501 DENNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHE 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +I +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYANEIALKLAQAGVRVEQDARDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E ++L+ + N + Sbjct: 616 EEKSEVIALDVFVATIEEEIKNRK 639 >gi|327490276|gb|EGF22064.1| threonine--tRNA ligase [Streptococcus sanguinis SK1058] Length = 647 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 152/445 (34%), Gaps = 32/445 (7%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 KY + RD +L L MI + +G+ WLP G + I +++ Sbjct: 228 LKKYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATVRRELERYIVDKE 285 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRS 120 +G + P L S +L+ SG ++ Y ++M D D + + P + +++ Sbjct: 286 LASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKH 345 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SYR LP +I + R E ++ + + +TPE + + + Sbjct: 346 HVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQL 405 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + ++ L R + D E + D Sbjct: 406 IIDVYADFNLTEYRFRLSLRD-----PQDTHKYYDNDEM--------WENAQTMLRAALD 452 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 453 EMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD----L 501 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + GADG++H M G+ + I + + + I ++ Sbjct: 502 KYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEA 557 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ +L G D+ E++ + + P Q+IVG K V D V ++ Sbjct: 558 HIDYAWQMAKKLRDKGVRADVDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVRR 617 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 + ++E + +N Sbjct: 618 YGQKETHTIPVDEFVEQILADIANK 642 >gi|306829065|ref|ZP_07462255.1| threonine--tRNA ligase [Streptococcus mitis ATCC 6249] gi|304428151|gb|EFM31241.1| threonine--tRNA ligase [Streptococcus mitis ATCC 6249] Length = 647 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 77/444 (17%), Positives = 158/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVDKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYEDFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QVKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + + + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDCGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +S+++ + +N Sbjct: 619 GQKETQTVSVDDFVQAILADIANK 642 >gi|329927796|ref|ZP_08281857.1| threonine--tRNA ligase [Paenibacillus sp. HGF5] gi|328938197|gb|EGG34592.1| threonine--tRNA ligase [Paenibacillus sp. HGF5] Length = 636 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 86/434 (19%), Positives = 157/434 (36%), Gaps = 39/434 (8%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L M + + G+ +LP G + + R Q E+ P Sbjct: 239 AKKRDHRKLGKELGLF--MFSEEAPGMPFFLPNGMIIRNELEQFARGLQFHRDYDEVRTP 296 Query: 73 TLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + + LW SG +D Y M ++ P + ++++ + SYR LP Sbjct: 297 LMMNKRLWEMSGHWDHYKDNM-YFTQVDETEYALKPMNCPGHMLVYKNSLHSYRELPIRI 355 Query: 133 YQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 + R E G+MR R F DA+ F + + ++ +++ G + Sbjct: 356 SEFGQVHRHEFSGALNGMMRVRTFCQDDAHIFVRPDQIQEE-IKQVIDFISQVYQVFGFE 414 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ 251 + P S E A++ QV D + I E Sbjct: 415 YTI-ELSTRPEDSMGSEELWEQAESSLQQVL-----------------DQMGLPYRINEG 456 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A Y D H + DSL + + ++ F F K+ ++ G D + H Sbjct: 457 DGAFYGPKIDFH---ILDSLKRSWQCGTIQLD----FQFPEKFD----LSYIGEDNQKHR 505 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + + + I + G +P +AP ++ +I + H D K+ R Sbjct: 506 PVVIHRAV--FGSIERFIGILTEHYGGAFPMWLAPVQVMIIPVSDH---YIDYSLKVKKR 560 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G V D E++G + A LL P +++G K + V ++ R G ++++ Sbjct: 561 LENAGIRVNVDVRNEKLGYKIREAGLLKTPYTLVLGEKEMDSDHVSVRKRGEGELGEIAI 620 Query: 432 EEVINYASHRFSNN 445 ++VI + + Sbjct: 621 DQVIERLRNEIESK 634 >gi|327481520|gb|AEA84830.1| prolyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166] Length = 571 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 130/279 (46%), Positives = 179/279 (64%), Gaps = 20/279 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L L+E P DA + SH+LMLR GMI + + G+Y+W+P+G +AL AI+REE Sbjct: 1 MRTSQFLLSTLKETPSDAVVISHQLMLRAGMIRKLASGLYTWMPMGLRALRKAEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A+LW ESGR++ YG E+LRL DR+D+ GPTHEEV+TD+ R+ Sbjct: 61 MNKAGALEVLMPAIQPAELWQESGRWEQYGPELLRLKDRHDREFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFG+MR REFLMKDAYSF L+ E + +Y++M + Sbjct: 121 ELNSYKQLPINFYQIQTKFRDEIRPRFGLMRGREFLMKDAYSFHLSQESLQETYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN---- 236 Y IF RLGL P++A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCNIFTRLGLNFRPVQADTGSIGGTGSHEFHVLAESGEDDIAFSDS-SDYAANIEKAEAI 239 Query: 237 ---------------TDFDDIISLNSIVEQWTAPYAATS 260 D D ++ +VEQ+ P T Sbjct: 240 PRETERAAPGEELRLIDTPDAKTIAELVEQFGLPVERTV 278 Score = 164 bits (415), Expect = 3e-38, Method: Composition-based stats. Identities = 74/191 (38%), Positives = 115/191 (60%), Gaps = 4/191 (2%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K V RGIEVGHIF GTKYS M+ G +GK + Sbjct: 378 PLPQVADLRNVVAGDPSPDGKGSLVIKRGIEVGHIFQLGTKYSEAMNCQVMGENGKPATL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE ++D +GI+WPD++APF+I+L+ +K + R+A +K+YA L Sbjct: 438 IMGCYGIGVSRVVAAAIEQNYDERGILWPDALAPFQIALVPMKYETEAVREATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD + G +FA +L+G P +++V + ++D +E KHR + ++ Sbjct: 498 TAAGYEVLLDDRDKKTSPGVKFADMELIGIPHRIVVSDRGLADGMLEYKHRRDAQPQPVA 557 Query: 431 LEEVINYASHR 441 E++++ + R Sbjct: 558 ASEILSFINSR 568 >gi|257124962|ref|YP_003163076.1| threonyl-tRNA synthetase [Leptotrichia buccalis C-1013-b] gi|257048901|gb|ACV38085.1| threonyl-tRNA synthetase [Leptotrichia buccalis C-1013-b] Length = 636 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 79/440 (17%), Positives = 163/440 (37%), Gaps = 44/440 (10%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + +H G ++P G + + + I R E + G Sbjct: 230 YLTMMEEAEKRDHRKLGKQLDLF--FVDEHGPGFPFFMPKGVELFNKLQEIWRVEHKKRG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + +LW SG + +Y + M ++K P + +++++ SY Sbjct: 288 YQEIKTPIMLDKELWEISGHWFNYRENMYTST-IDEKEYAIKPMNCPGSIIAYKNNLHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 ++LP + ++ L R E G+MR R F DA+ F T E + ++ Y + Sbjct: 347 KDLPLKYGEMGLVHRHEFSGALHGLMRVRAFTQDDAHVFC-TKEQIEEQIIEIIDLYDKF 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G E+ + T + S + + + + + Sbjct: 406 YTVFG------------------FEYHIELSTKPDKAIGSDEIWEMAEANLKSALEHKGI 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y D K+ DS+ + ++ F ++ ++ G Sbjct: 448 NYKLNPGDGAFYGPKIDF---KMKDSIGRIWQCGTIQLD----FNLPARF----EMSYIG 496 Query: 305 ADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 ADG+ H M + R + +IE A Sbjct: 497 ADGEKHEPVMIHRAMYGSLERFIGILIEHYAGAFPTWLAPVQARILTI-------SDEQV 549 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEIKHR 421 ++++ +L G V D E+IG + A+ + P+Q+I+G V++++V ++ Sbjct: 550 PFAKELFIKLQDAGIRVELDTRVEKIGYKIREANGVQKIPVQLIIGKNEVANNEVNVRRF 609 Query: 422 LTGIREDMSLEEVINYASHR 441 + +++S++E+I Sbjct: 610 GSQDSKNVSVDEIIETLKQE 629 >gi|315612715|ref|ZP_07887626.1| threonine--tRNA ligase [Streptococcus sanguinis ATCC 49296] gi|315314825|gb|EFU62866.1| threonine--tRNA ligase [Streptococcus sanguinis ATCC 49296] Length = 647 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 77/444 (17%), Positives = 158/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVDKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYEDFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QVKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + + + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDCGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +S+++ + +N Sbjct: 619 GQKETQTVSVDDFVQAILADIANK 642 >gi|228939521|ref|ZP_04102109.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228972374|ref|ZP_04132985.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978988|ref|ZP_04139352.1| Threonyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228780699|gb|EEM28913.1| Threonyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228787391|gb|EEM35359.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820221|gb|EEM66258.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326940068|gb|AEA15964.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis CT-43] Length = 640 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 156/444 (35%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ ++L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGNELELF--MFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W +SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWEKSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TP+ + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPKQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + I + V Sbjct: 501 DENNDKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHE 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +I +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYANEITLKLAQAGVRVEQDARDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E ++L+ + N + Sbjct: 616 EEKSEVVALDVFVASIEEEIKNRK 639 >gi|218782046|ref|YP_002433364.1| threonyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01] gi|226701455|sp|B8FN26|SYT_DESAA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|218763430|gb|ACL05896.1| Threonyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01] Length = 636 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 81/448 (18%), Positives = 157/448 (35%), Gaps = 42/448 (9%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD L L + H+ + G+ + G + + + A REE + Sbjct: 225 KSYLHLLEEAKKRDHRKLGTALDLFS--FHEEAAGMPFFHARGMELWNALLAYWREEHKK 282 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G +E P + + LW SG +++Y + M D P + ++++ Sbjct: 283 AGYVETKTPIMLNKSLWERSGHWENYRENMYTSL-IEDFDYAIKPMNCPGGMLLYKTKHH 341 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY +LP +I L R EL G+ R R F DA+ F ++ + L Sbjct: 342 SYNDLPIRAGEIGLVHRHELSGVLSGLFRVRAFHQDDAHIF-----MTEEMIEDEILGVL 396 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ R+ F + T + + + + D Sbjct: 397 QLVERMYSTFGLG--------------FHLELSTRPEKTIGTDEQWEKATEGLRAALDKS 442 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I E A Y D+H + D+L + +++ T+ Sbjct: 443 GRDYKINEGDGAFYGPKIDIH---IKDALGRTWQCGTIQLDMNLP--------ERFDLTY 491 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 GAD + H + G++ ++ + GK +W + A + Sbjct: 492 VGADNQRHRPVMIHRVIYGSIERFLGILIEHYAGKFPLW------LSPCQAVVLAMNDDV 545 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +++ ARL + G + D E I + A L PL + VG K + + ++ Sbjct: 546 AGYAKEVKARLEEAGLRMEIDLRAESINKKVRDAQLSKIPLMLTVGGKEEAAQTLAVRTL 605 Query: 422 LTGIREDMSLEEVINYASHRFSNNRPVL 449 ++ ++++ ++ P L Sbjct: 606 DGKVKYGVTIDNFLDKVLPHIETRNPDL 633 >gi|319946565|ref|ZP_08020800.1| threonine--tRNA ligase [Streptococcus australis ATCC 700641] gi|319747311|gb|EFV99569.1| threonine--tRNA ligase [Streptococcus australis ATCC 700641] Length = 647 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 157/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVDKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYGDFNLNEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QVKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + + + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 +S++E + +N Sbjct: 619 GQKETNTVSVDEFVAAILADIANK 642 >gi|26987940|ref|NP_743365.1| prolyl-tRNA synthetase [Pseudomonas putida KT2440] gi|81840777|sp|Q88NK2|SYP_PSEPK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|24982651|gb|AAN66829.1|AE016311_9 prolyl-tRNA synthetase [Pseudomonas putida KT2440] Length = 571 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 117/237 (49%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + + V A++REE Sbjct: 1 MRTSQYLLATQKETPADAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P++Q A+LW ESGR++ YG E+LRL DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPSIQPAELWQESGRWEQYGPELLRLKDRHQRDFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M + Sbjct: 121 ELSSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQETYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y +F RLGL P++A++G IGG SHEF VLA++GE V S D+ E Sbjct: 181 YSNVFTRLGLDFRPVQADTGSIGGSYSHEFHVLAESGEDDVIFSDS-SDYAANIEKA 236 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 114/207 (55%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ + V RGIEVGHIF GTKYS + Sbjct: 364 DDKHYFGVNWERDLPVPQVADLRNVVEGDPSPDGQGTLVIKRGIEVGHIFQLGTKYSEAL 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK + MG YGIG RVVAA IE S+D KGIIW D++APF+I+L+ ++ Sbjct: 424 KCQVLGENGKPVVLSMGCYGIGVSRVVAAAIEQSYDDKGIIWNDALAPFQIALVPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 V R+A +K+YA L+ G +V DD + G +FA +L+G P +++V + +++ + Sbjct: 484 DVVREATDKLYAELTAAGYEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNL 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E KHR + + L EV+ + R Sbjct: 544 EYKHRTEQDAQALPLNEVLTFLQARVR 570 >gi|94989937|ref|YP_598037.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10270] gi|123258050|sp|Q1JI30|SYT_STRPD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|94543445|gb|ABF33493.1| Threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10270] Length = 647 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 86/449 (19%), Positives = 164/449 (36%), Gaps = 38/449 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L L+E RD +L L MI + +G+ WLP G + I +++ Sbjct: 227 KAYLTRLEEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPDGATIRRTLERYITDKEL 284 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M + D D + + P + ++++H Sbjct: 285 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPVMDMGDGEEFVLRPMNCPHHIQVYKNH 344 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP ++ + R E G+ R RE + D + F TPE + + + Sbjct: 345 VRSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFV-TPEQIQEEFQRALQL 403 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSENTDF 239 + ++ L R D +T + + + + Sbjct: 404 IIDVYADFNLTDYRFRLS--------------YRDPNDTHKYYDNDEMWENAQSMLKAAL 449 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 450 DEMDVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD---- 498 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GADG++H M G+ + I + I ++ Sbjct: 499 LKYIGADGEEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQV----TVIPISNE 554 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L G DD E++ + + P Q+IVG K + D V ++ Sbjct: 555 AHIDYAWEVAKTLRDRGVRADVDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVR 614 Query: 420 HRLTGIREDMSLEEVINYASHRF-SNNRP 447 + S+EE + +RP Sbjct: 615 RYGSKATHTESVEEFVENILADIARKSRP 643 >gi|148546477|ref|YP_001266579.1| prolyl-tRNA synthetase [Pseudomonas putida F1] gi|166980143|sp|A5VZT5|SYP_PSEP1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|148510535|gb|ABQ77395.1| prolyl-tRNA synthetase [Pseudomonas putida F1] Length = 571 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 117/237 (49%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + + V A++REE Sbjct: 1 MRTSQYLLATQKETPADAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P++Q A+LW ESGR++ YG E+LRL DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPSIQPAELWQESGRWEQYGPELLRLKDRHQRDFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M + Sbjct: 121 ELSSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQETYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y +F RLGL P++A++G IGG SHEF VLA++GE V S D+ E Sbjct: 181 YSNVFTRLGLDFRPVQADTGSIGGSYSHEFHVLAESGEDDVIFSDS-SDYAANIEKA 236 Score = 163 bits (413), Expect = 5e-38, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ + V RGIEVGHIF GTKYS + Sbjct: 364 DDKHYFGVNWERDLPVPQVADLRNVVEGDPSPDGQGTLVIKRGIEVGHIFQLGTKYSEAL 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK + MG YGIG RVVAA IE S+D KGIIW D++APF+I+L+ ++ Sbjct: 424 KCQVLGENGKPVVLSMGCYGIGVSRVVAAAIEQSYDDKGIIWNDALAPFQIALVPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 +V R+A +K+YA L+ G +V DD + G +FA +L+G P +++V + +++ + Sbjct: 484 EVVREATDKLYAELTAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNL 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E KHR + + L EV+ + R Sbjct: 544 EYKHRTEQDAQALPLNEVLTFLQARVR 570 >gi|303233025|ref|ZP_07319704.1| threonine--tRNA ligase [Atopobium vaginae PB189-T1-4] gi|302480896|gb|EFL43977.1| threonine--tRNA ligase [Atopobium vaginae PB189-T1-4] Length = 589 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 80/438 (18%), Positives = 157/438 (35%), Gaps = 43/438 (9%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD ++ L M+++ G WLP G + + + +E Q++ G ++ Sbjct: 190 EAEKRDHRKIGKEMDLF--MLNEAGPGFPFWLPNGMRIRNELMKYWQEMQDQYGYEQIQT 247 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + S LW SG +D Y + M +D+ P + ++ S +SYR+LP Sbjct: 248 PIILSRKLWETSGHWDHYKENMYT-TVIDDEDFAIKPMNCPGACLVYMSKPRSYRDLPLK 306 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + L R EL+ G+ R REF DA+ F + ++ + + G Sbjct: 307 LAEAGLDHRHELKGTLHGLFRVREFTQDDAHLFIRPDQICDE-VREVTELISAYYKQFGF 365 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + + P S E A+ G + + +I E Sbjct: 366 PY-KVELSTRPENSMGSDEDWATAEAG-----------------LRDALETMGLDYTINE 407 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D H L D L + ++ F + + +DG+ Sbjct: 408 GDGAFYGPKIDFH---LKDCLGRTWQCGTIQLDFQFPHNF--------NLEYVDSDGQKK 456 Query: 311 YV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + G G+ ++ ++GK +W + + + + RD ++ Sbjct: 457 RPIMIHRAGFGSFERFIGMLIEQYEGKFPVWLAPLQVKVLPV------SEKTRDYARELT 510 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLL-GFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L K+ V DD E+IG + A + P +IVG + + ++ R + Sbjct: 511 QKLLKLKIRVKLDDRDEKIGYKIREARSIDRVPYMLIVGEQEAQAGNISVRDR-SNTTTQ 569 Query: 429 MSLEEVINYASHRFSNNR 446 + ++ + + + + Sbjct: 570 YAFDDFVALLQRQIAARK 587 >gi|71903081|ref|YP_279884.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS6180] gi|123734122|sp|Q48US7|SYT_STRPM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|71802176|gb|AAX71529.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS6180] Length = 647 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 84/444 (18%), Positives = 163/444 (36%), Gaps = 37/444 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L L+E RD +L L MI + +G+ WLP G + I +++ Sbjct: 227 KAYLTRLEEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPDGATIRRTLERYITDKEL 284 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M + D D + + P + ++++H Sbjct: 285 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPVMDMGDGEEFVLRPMNCPHHIQVYKNH 344 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP ++ + R E G+ R RE + D + F TPE + + + Sbjct: 345 VRSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFV-TPEQIQEEFQRALQL 403 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSENTDF 239 + ++ L R D +T+ + + + + Sbjct: 404 IIDVYADFNLTDYRFRLS--------------YRDPNDTRKYYDNDEMWENAQSMLKAAL 449 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 450 DEMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD---- 498 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GADG++H M G+ + I + I ++ Sbjct: 499 LKYIGADGEEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQV----TVIPISNE 554 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L G DD E++ + + P Q+IVG K + D V ++ Sbjct: 555 AHIDYAWEVAKTLRDRGVRADVDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVR 614 Query: 420 HRLTGIREDMSLEEVINYASHRFS 443 + S+EE + + Sbjct: 615 RYGSKATHTESVEEFVENILADIA 638 >gi|198283898|ref|YP_002220219.1| prolyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666412|ref|YP_002426532.1| prolyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270] gi|226731419|sp|B7J4Y9|SYP_ACIF2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226731420|sp|B5EKH7|SYP_ACIF5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|198248419|gb|ACH84012.1| prolyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518625|gb|ACK79211.1| prolyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 570 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 118/237 (49%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F+P L+E P +AE+ SH+L+LR G I + + G+Y+W+PLG + L V ++REE Sbjct: 1 MRASQIFIPTLKETPAEAELVSHQLLLRGGFIRRLASGLYTWMPLGLRVLRKVERVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ +P +Q A+LW ESGR++ YG E+LRL DR+D+ GPTHEEV++D+ R Sbjct: 61 MDRSGAQELLMPVVQPAELWQESGRWEQYGPELLRLRDRHDREFCLGPTHEEVISDLARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP FYQIQ KFRDE+RPRFG+MR REF+MKDAYSF + + +Y M+ + Sbjct: 121 EIHSYRQLPVNFYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHMDHSSLEITYQAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y R+F RLGL + A++G IGG SHEF VLAD+GE + D+ E Sbjct: 181 YQRVFTRLGLSFRAVEADNGAIGGKRSHEFHVLADSGEDAIVSCHHC-DYAANMEKA 236 Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats. Identities = 66/191 (34%), Positives = 96/191 (50%), Gaps = 4/191 (2%) Query: 255 PYAATSDVHNEKLFDSLP---ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 P A +D+ N + D+ P E RGIEVGH+F G +YS M T G+D Sbjct: 376 PRPAAADLRNVRAGDACPHCAEGTLSIRRGIEVGHVFQLGERYSESMGITVLDETGRDAT 435 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYA 370 V MG YGIG RVVAA +E D +GIIWP ++APF++ ++ I A A + ++ Sbjct: 436 VTMGCYGIGVSRVVAAAVEQHFDDRGIIWPVALAPFEVGIVAINARKSPDVAAAAQALHD 495 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 RL G V DD E+ G QFA DL+G P +++V ++ E + R T + Sbjct: 496 RLEAEGYSVLLDDRDERPGVQFATMDLVGLPHRIVVSDTVLAQGVWEYRARRTTENVLLD 555 Query: 431 LEEVINYASHR 441 +++ Sbjct: 556 ETQLMERLRKE 566 >gi|327398462|ref|YP_004339331.1| threonyl-tRNA synthetase [Hippea maritima DSM 10411] gi|327181091|gb|AEA33272.1| threonyl-tRNA synthetase [Hippea maritima DSM 10411] Length = 620 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 81/443 (18%), Positives = 161/443 (36%), Gaps = 41/443 (9%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E RD +L L + + + G+ W P G + R+E + G Sbjct: 216 YLKFLEEVKKRDHRKLGKQLDLFS-INDEVGPGLIIWHPKGAMLRYLIEEFERKEHLKRG 274 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + LW SG +D Y + M + +D++ P + +++S +SY Sbjct: 275 YEFVKGPEILRTQLWKRSGHFDHYRENM-YFTEIDDQSFGIKPMNCLGHIQVYKSKKRSY 333 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP ++++ + R E G++R REF DA+ F + + + + Sbjct: 334 RELPKRYFELGVVHRHEKSGVLHGLLRVREFTQDDAHIFCRPDQLNDE-IIGVLNFVQDV 392 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G E+ + T + + + + Sbjct: 393 MDIFG------------------FEYELEISTRPENSIGTDQQWELATNALINALKNTGR 434 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y DV KL D+L + + + F ++ T+ Sbjct: 435 EYDINEGDGAFYGPKIDV---KLKDALGRKWQCATIQCD----FTLPERFD----LTYVD 483 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DGK+ + +G++ A++ + +P +AP ++ ++ + + Sbjct: 484 EDGKEKQPVMVHRVILGSIERFIAILI---ENYEGDFPVWIAPVQVRVLPVSEKHE---A 537 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + +Y L G V ++ E +G + A+ P V+VG K + D + ++ R Sbjct: 538 YAKDVYQTLKDRGIRVEIEERNETLGKKIRFAETDKVPYVVVVGDKEIEDKTISVRKRKE 597 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 G M+++ I + R Sbjct: 598 GDLGCMNIDGFIERLQKEIDSRR 620 >gi|222056447|ref|YP_002538809.1| threonyl-tRNA synthetase [Geobacter sp. FRC-32] gi|221565736|gb|ACM21708.1| threonyl-tRNA synthetase [Geobacter sp. FRC-32] Length = 645 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 83/440 (18%), Positives = 148/440 (33%), Gaps = 40/440 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + R E + Sbjct: 241 YLARIEEAKRRDHRKLGKELDLFS-FSDEVGAGLVIWHPKGAMLRTIIEDFERREHLKRD 299 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + DLW SG YD+Y + M + ++++ P + I++S ++SY Sbjct: 300 YDIVVGPQILKTDLWQRSGHYDNYRENM-YFTEVDEQSFGIKPMNCLSHMMIYKSRLRSY 358 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP +++ R E G++R R F DA+ + + Sbjct: 359 RDLPLRLFELGTVHRHERAGVLHGLLRVRCFTQDDAHILCTPEQLDSE-----IKGVISF 413 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G EF + T + S + D + D Sbjct: 414 VQD--------------VMGVFGFEFEMELSTRPEKSIGSDEDWDRATNALLGALKDSGR 459 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ KL DSL + + + F ++ T+ Sbjct: 460 PFEINEGDGAFYGPKIDI---KLRDSLDRRWQCATIQCD----FTLPERFD----LTYID 508 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ + +G++ V+ G +W V +++ Sbjct: 509 ADGEKKRPVMVHRVILGSIERFIGVLIEHFAGSFPVWLSPVQVVVLTVT------DNQLS 562 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++YA L G V D E++G + A L P +++G K V V + R Sbjct: 563 FAQQVYAELRAAGLRVQQDFRNEKLGFKIREAQLQKIPYMLVIGDKEVEAGMVTPRFRDG 622 Query: 424 GIREDMSLEEVINYASHRFS 443 + M + I + Sbjct: 623 KNLDSMKCSDFIEFIEKEVK 642 >gi|218231087|ref|YP_002367070.1| threonyl-tRNA synthetase [Bacillus cereus B4264] gi|218159044|gb|ACK59036.1| threonine--tRNA ligase [Bacillus cereus B4264] Length = 640 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 155/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 KYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TP+ + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPKQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + + +G++ A++ G W + + I + V Sbjct: 501 DENNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHE 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +I +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYANEIAHKLAQAGVRVEQDARDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E ++L+ + N + Sbjct: 616 EEKSEVIALDVFVASIEEEIKNRK 639 >gi|77360339|ref|YP_339914.1| threonyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125] gi|76875250|emb|CAI86471.1| threonyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125] Length = 636 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 72/448 (16%), Positives = 142/448 (31%), Gaps = 41/448 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E RD L L + + G+ W G + +RE+ Sbjct: 227 KQLKAYLKRLEEAEKRDHRRIGKALDL--WHWQEEAPGMVFWHNDGWSIYRELEDFVREK 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 E+ P + LW +SG ++ Y M + P + IF Sbjct: 285 LREYDYEEVKGPMMMDRSLWEKSGHWEKYADAMFT-TVSEKREYAIKPMNCPGHVQIFNQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F + + Sbjct: 344 GLKSYRDLPLRMAEFGCCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIMDE-VSACIK 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + G + I ++ + P D + Sbjct: 403 MVYDTYETFGFEKIVVKLSTRPEQR-----------------IGEDHMWDKAELALAEAL 445 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + A Y + L+D L + ++ G Sbjct: 446 KLNEIEFDYLPGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLDFALPGRLG-------- 494 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 AT+ + + + +G++ ++ + G W +++ Sbjct: 495 ATYVAENNERRTPVMIHRAILGSIERFIGILTEEYAGLFPTWLAPKQVVIMNIT------ 548 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D +++ +L+K+G D E+IG + L P ++VG K V +V + Sbjct: 549 DKQADYVKEVVQKLNKLGIRATADLRNEKIGFKIREHTLKRIPYLLVVGDKEVEQQEVAV 608 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNNR 446 + R ++++ + S + + Sbjct: 609 RTRTGEDLGKFNVDDFVAKISEEIKSRQ 636 >gi|296502926|ref|YP_003664626.1| threonyl-tRNA synthetase [Bacillus thuringiensis BMB171] gi|296323978|gb|ADH06906.1| threonyl-tRNA synthetase [Bacillus thuringiensis BMB171] Length = 640 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 156/444 (35%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TP+ ++ + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPKQIENEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + + +G++ A++ G W + + I + V Sbjct: 501 DENNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHE 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +I +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYANEIALKLAQAGVRVEQDARDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E ++L+ + N + Sbjct: 616 EEKSEVIALDVFVATIEEEIKNRK 639 >gi|24373852|ref|NP_717895.1| threonyl-tRNA synthetase [Shewanella oneidensis MR-1] gi|73919825|sp|Q8EER9|SYT_SHEON RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|24348259|gb|AAN55339.1|AE015671_6 threonyl-tRNA synthetase [Shewanella oneidensis MR-1] Length = 642 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 74/443 (16%), Positives = 143/443 (32%), Gaps = 40/443 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S Y + + RD +L L + + + G+ W G + IR + N Sbjct: 229 LSTYLARLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWSIFLELERFIRRKLN 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + LW SG +D Y + M ++ P + IF + Sbjct: 287 QYTYQEVKGPLMMDRVLWERSGHWDKYSEAMFT-TSSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + + Sbjct: 346 KSYRDLPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQVQAEVSSCIQMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + G ++I ++ + P D + Sbjct: 405 YDTYSTFGFENIVVKLSTRPEKR-----------------IGDDAMWDRAEEALKQALRA 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 +I+ A Y + L D L + ++ G AT Sbjct: 448 NNIEFTILPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDYALPSRLG--------AT 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ ++ + G+ W + +++ Sbjct: 497 YVAEDNSRQTPVMIHRAILGSLERFLGILIEEYAGRFPTWLAPMQVVVMNIT------DK 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D E++ + G +D E+IG + L P ++VG + + + +V ++ Sbjct: 551 QADYVEEVVKFFKEQGIRASFDLRNEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R M +E+ + S Sbjct: 611 RDGVDLGKMRIEDFAAKIHQQIS 633 >gi|325288434|ref|YP_004264615.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271] gi|324963835|gb|ADY54614.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271] Length = 636 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 76/443 (17%), Positives = 151/443 (34%), Gaps = 41/443 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + + + RD +L L + +H G + P G + + R+E + G Sbjct: 231 FLFKLEEAKRRDHRKLGMELDLFS--LHDEGPGFPFFHPKGMVIRNLLEDFWRKEHFKRG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + + LW +SG +D Y + M + P + ++++ ++SY Sbjct: 289 YVEIKTPIILNRALWEQSGHWDHYKENM-YFTKIDGVDFAVKPMNCPGGMIMYKTKLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R EL G++R R F DA+ F L P K ++ Sbjct: 348 RDLPIRCGELGLVHRHELSGALHGLLRVRNFTQDDAHIFML-PSQIKDEIIRVINLVDDF 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G E+ V T S + + + + + Sbjct: 407 YKVFG------------------FEYHVEVSTRPENSMGSDEEWEMATRALTEALEALNM 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y D H + D R + G I + + G Sbjct: 449 SYKVNPGDGAFYGPKIDFHLKDCLD----------RTWQCGTI-QLDFQMPEKFDLNYIG 497 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ A++ + +P +AP ++ ++ I + Sbjct: 498 EDGEKHRPVMIHRVVYGSIERFIALLT---EHYAGAFPVWLAPVQVRILPISDKHS---E 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L ++ D+ E+I + A P ++VG + + + ++ Sbjct: 552 YAAKVAETLKEMDIRTEIDERREKISYKVREAQTEKVPFALVVGDQEAEEGSLAVRRYGE 611 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 MS EE + + Sbjct: 612 QNTVKMSREEFLATIIEEIQTKK 634 >gi|238753686|ref|ZP_04615048.1| Threonyl-tRNA synthetase [Yersinia ruckeri ATCC 29473] gi|238708238|gb|EEQ00594.1| Threonyl-tRNA synthetase [Yersinia ruckeri ATCC 29473] Length = 642 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 74/447 (16%), Positives = 146/447 (32%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ +L L+E RD +L L + + + G+ W G + +R + Sbjct: 227 KQLNAYLQRLEEAGKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRSK 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 E+ P + LW ++G +++Y + M ++ P + IF Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWENYAEHMFT-TSSENREYCIKPMNCPGHVQIFNQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F + N Sbjct: 344 GLKSYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHVFCTEEQVRDE-VNSCIK 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + I ++ + P S E A+ Sbjct: 403 MVYDMYSTFGFEKIVVKLSTRPEKRIGSDELWTRAED-----------------DLAAAL 445 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + A Y + L D L + ++ F + S Sbjct: 446 TENGIPFDYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGRLS---- 494 Query: 300 ATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A++ G + V + +G+M ++ + G W V +++ Sbjct: 495 ASYIGENNDRQVPVMIHRAILGSMERFIGILTEEYAGFFPTWIAPVQVVVMNIT------ 548 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + +++ +L G V D E+IG + L P ++ G K + KV + Sbjct: 549 DSQAEYVQEVTKKLQDAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEIETGKVAV 608 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R + + V++ + Sbjct: 609 RTRRGKDLGSLDVNVVVDKLLTEIRSR 635 >gi|296390688|ref|ZP_06880163.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa PAb1] Length = 571 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 120/237 (50%), Positives = 167/237 (70%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DA + SH+L+LR GMI + + G+Y+WLP+G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAVVISHQLLLRAGMIRRLASGLYTWLPMGLRVLRKVETIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q A+LW ESGR++ YG E+LRL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPAVQPAELWQESGRWEQYGPELLRLKDRHEREFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFG+MR REF+MKDAYSF L+ + + +Y+ M+ + Sbjct: 121 ELNSYKQLPINFYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHLSQDSLQQTYDGMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y +IF RLGL P++A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YSKIFSRLGLDFRPVQADNGSIGGSGSHEFHVLANSGEDDIVFSDS-SDYAANIEKA 236 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 111/193 (57%), Gaps = 4/193 (2%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K V RGIEVGHIF GTKYS M GK + Sbjct: 378 PLPEVADLRNVVEGDPSPDGKGTLVIKRGIEVGHIFQLGTKYSEAMKLNVLSEQGKPVNL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE +HD +GI+WP ++APF+I+L+ +K + + A +K+YA L Sbjct: 438 IMGCYGIGVSRVVAAAIEQNHDERGILWPSALAPFQIALVPLKYETESVKQATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD + G +FA +L+G P ++++ + +++ +E K R +++ Sbjct: 498 TAAGFEVLLDDRDKKTSPGVKFADMELIGIPHRIVISDRGLNEGVLEYKGRRDSESQNLP 557 Query: 431 LEEVINYASHRFS 443 + E++++ + + S Sbjct: 558 IGELMSFITEKLS 570 >gi|15596153|ref|NP_249647.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa PAO1] gi|107100413|ref|ZP_01364331.1| hypothetical protein PaerPA_01001438 [Pseudomonas aeruginosa PACS2] gi|218893073|ref|YP_002441942.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa LESB58] gi|81857350|sp|Q9I502|SYP_PSEAE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701320|sp|B7UXX6|SYP_PSEA8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|9946862|gb|AAG04345.1|AE004529_11 prolyl-tRNA synthetase [Pseudomonas aeruginosa PAO1] gi|218773301|emb|CAW29113.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa LESB58] Length = 571 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 120/237 (50%), Positives = 167/237 (70%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DA + SH+L+LR GMI + + G+Y+WLP+G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAVVISHQLLLRAGMIRRLASGLYTWLPMGLRVLRKVETIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q A+LW ESGR++ YG E+LRL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPAVQPAELWQESGRWEQYGPELLRLKDRHEREFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFG+MR REF+MKDAYSF L+ + + +Y+ M+ + Sbjct: 121 ELNSYKQLPINFYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHLSQDSLQQTYDGMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y +IF RLGL P++A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YSKIFSRLGLDFRPVQADNGSIGGSGSHEFHVLANSGEDDIVFSDS-SDYAANIEKA 236 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 112/193 (58%), Gaps = 4/193 (2%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K V RGIEVGHIF GTKYS M + GK + Sbjct: 378 PLPEVADLRNVVEGDPSPDGKGTLVIKRGIEVGHIFQLGTKYSEAMKLSVLSEQGKPVNL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE +HD +GI+WP ++APF+I+L+ +K + + A +K+YA L Sbjct: 438 IMGCYGIGVSRVVAAAIEQNHDERGILWPSALAPFQIALVPLKYETESVKQATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD + G +FA +L+G P ++++ + +S+ +E K R +++ Sbjct: 498 TAAGFEVLLDDRDKKTSPGVKFADMELIGIPHRIVISDRGLSEGVLEYKGRRDSESQNLP 557 Query: 431 LEEVINYASHRFS 443 + E++++ + + S Sbjct: 558 IGELMSFITEKLS 570 >gi|116048881|ref|YP_792318.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14] gi|313105843|ref|ZP_07792106.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa 39016] gi|122257988|sp|Q02IB8|SYP_PSEAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|115584102|gb|ABJ10117.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14] gi|310878608|gb|EFQ37202.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa 39016] Length = 571 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 120/237 (50%), Positives = 167/237 (70%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DA + SH+L+LR GMI + + G+Y+WLP+G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAVVISHQLLLRAGMIRRLASGLYTWLPMGLRVLRKVETIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q A+LW ESGR++ YG E+LRL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPAVQPAELWQESGRWEQYGPELLRLKDRHEREFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFG+MR REF+MKDAYSF L+ + + +Y+ M+ + Sbjct: 121 ELNSYKQLPINFYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHLSQDSLQQTYDGMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y +IF RLGL P++A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YSKIFSRLGLDFRPVQADNGSIGGSGSHEFHVLANSGEDDIVFSDS-SDYAANIEKA 236 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 111/193 (57%), Gaps = 4/193 (2%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K V RGIEVGHIF GTKYS M GK + Sbjct: 378 PLPEVADLRNVVEGDPSPDGKGTLVIKRGIEVGHIFQLGTKYSEAMKLNVLSEQGKPVNL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE +HD +GI+WP ++APF+I+L+ +K + + A +K+YA L Sbjct: 438 IMGCYGIGVSRVVAAAIEQNHDERGILWPSALAPFQIALVPLKYETESVKQATDKLYAEL 497 Query: 373 SKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD + G +FA +L+G P ++++ + +++ +E K R +++ Sbjct: 498 TAAGFEVLLDDRDKKTSPGVKFADMELIGIPHRIVISDRGLNEGVLEYKGRRDSESQNLP 557 Query: 431 LEEVINYASHRFS 443 + E++++ + + S Sbjct: 558 IGELMSFITEKLS 570 >gi|308174589|ref|YP_003921294.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7] gi|307607453|emb|CBI43824.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7] gi|328554512|gb|AEB25004.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens TA208] Length = 643 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 82/432 (18%), Positives = 159/432 (36%), Gaps = 32/432 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L + +G+ WLP G + I +++ G Sbjct: 235 LRMLEEAKERDHRKLGKELKLFAN-SQKVGQGLPLWLPKGATIRRVIERYIVDKELSLGY 293 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S DL+ SG ++ Y M + +++ ++ P + I++ I SYR Sbjct: 294 EHVYTPVLGSKDLYETSGHWEHYQDGMFPPMEMDNETLVLRPMNCPHHMMIYKQDIHSYR 353 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K + + ++ Sbjct: 354 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEEFIRTVRLIQDVYE 413 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIISL 245 GL R D +T+ + D M S D+I Sbjct: 414 DFGLSDYTFRLS--------------YRDPEDTEKYFDDDDMWNKAQSMLKAAMDEIGHD 459 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y DV ++ ++ + + +S ++ F ++ T+ G Sbjct: 460 YYEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LTYVGE 508 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DGK H + G + + + + P +AP + +I + V D Sbjct: 509 DGKQHRPVVIHR--GVVSTMERFVAFLIEEHKGALPTWLAPVQFQVIPVSP--SVHLDYA 564 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +K+ RL + G V D E+IG + A + P ++VG + + V ++ Sbjct: 565 KKVQERLQREGLRVELDSRDEKIGYKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQK 624 Query: 426 REDMSLEEVINY 437 E +SL++ + Sbjct: 625 SETVSLDDFVKK 636 >gi|321312429|ref|YP_004204716.1| threonyl-tRNA synthetase [Bacillus subtilis BSn5] gi|291485328|dbj|BAI86403.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195] gi|320018703|gb|ADV93689.1| threonyl-tRNA synthetase [Bacillus subtilis BSn5] Length = 643 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 87/433 (20%), Positives = 161/433 (37%), Gaps = 34/433 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L + +G+ WLP G + I +++ G Sbjct: 235 LRMLEEAKERDHRKLGKELKLFAN-SQKVGQGLPLWLPKGATIRRVIERYIVDKEISLGY 293 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG +D Y + M + +++ ++ P + I++ I SYR Sbjct: 294 EHVYTPVLGSKELYETSGHWDHYQEGMFPPMEMDNETLVLRPMNCPHHMMIYKQDIHSYR 353 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP ++ R E+ G+ R R + DA+ F + + ++ Sbjct: 354 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTVR-LIQDVY 412 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIIS 244 GL R D +T+ + D M S D+I Sbjct: 413 EDFGLSDYTFRLS--------------YRDPEDTEKYFDDDEMWNKAQSMLKEAMDEIGH 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ ++ + + +S ++ F ++ T+ G Sbjct: 459 DYYEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LTYIG 507 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DGK H + G + + + + P +AP + +I + V D Sbjct: 508 EDGKQHRPVVIHR--GVVSTMERFVAFLIEEHKGALPTWLAPVQFQVIPVSP--AVHLDY 563 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +K+ RL + G V D E+IG + A + P ++VG + + V ++ Sbjct: 564 AKKVQERLQREGLRVEVDSRDEKIGYKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQ 623 Query: 425 IREDMSLEEVINY 437 E +SL+E + Sbjct: 624 NSETISLDEFVKK 636 >gi|322374759|ref|ZP_08049273.1| threonine--tRNA ligase [Streptococcus sp. C300] gi|321280259|gb|EFX57298.1| threonine--tRNA ligase [Streptococcus sp. C300] Length = 647 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 157/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVDKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYEDFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QVKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + + + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + + +++ + +N Sbjct: 619 GQKETQTVPVDKFVAAILADIANK 642 >gi|229144961|ref|ZP_04273357.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|228638483|gb|EEK94917.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST24] Length = 640 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 157/444 (35%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ ++L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEATKRNHRKLGNELELF--MFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TP+ ++ + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPKQIENEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + + +G++ A++ G W + + I + V Sbjct: 501 DENNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHE 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +I +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYANEIALKLAQAGVRVEQDARDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E ++L+ + N + Sbjct: 616 EEKSEVIALDVFVATIEEEIKNRK 639 >gi|330828282|ref|YP_004391234.1| Prolyl-tRNA synthetase, family II [Aeromonas veronii B565] gi|328803418|gb|AEB48617.1| Prolyl-tRNA synthetase, family II [Aeromonas veronii B565] Length = 574 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 121/235 (51%), Positives = 161/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L + I+REE Sbjct: 1 MRTSQYLLSTLKETPSDAEVVSHQLMLRAGMIRKLASGMYAWLPTGLRVLKKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+S+P +Q A+LW ESGR+D YG E+ RL DR+++ + GPTHEEV+T + R Sbjct: 61 MNNAGAVEVSMPVVQPAELWQESGRWDDYGPELCRLTDRHNRPFVLGPTHEEVITALVRY 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR REFLMKDAYSF + E +Y KM + Sbjct: 121 EVNSYKQLPLNLYQIQTKFRDEVRPRFGVMRGREFLMKDAYSFHIDKESLVDTYEKMHAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y + F R+GL P++A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCKAFTRMGLNFRPVQADTGSIGGTGSHEFQVLAESGEDLIAFSDS-SDYAANIE 234 Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats. Identities = 68/188 (36%), Positives = 108/188 (57%), Gaps = 3/188 (1%) Query: 258 ATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D + K + RGIEVGHIF GTKYS M A+ GK ++MG Sbjct: 385 EVADLRNVVEGDPSPCGQGKLLLKRGIEVGHIFQLGTKYSEAMKASVLNEAGKSVTMEMG 444 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSK 374 YGIG R+VAA IE ++D GIIWPD++APF+++++ + + + ++ YA L Sbjct: 445 CYGIGVSRLVAAAIEQNNDQYGIIWPDAIAPFEVAIVPMNMHKSERVAEQAQQFYAELKA 504 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV +DD E+ G FA +LLG P +++G + + + VE K R TG ++++++ ++ Sbjct: 505 AGVDVLFDDRKERPGVMFADMELLGIPHAIVIGDRGLDNGVVEYKCRRTGEKQEVAISDI 564 Query: 435 INYASHRF 442 I + Sbjct: 565 IAMLKAKL 572 >gi|313497556|gb|ADR58922.1| ProS [Pseudomonas putida BIRD-1] Length = 571 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 117/237 (49%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + + V A++REE Sbjct: 1 MRTSQYLLATQKETPADAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P++Q A+LW ESGR++ YG E+LRL DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPSIQPAELWQESGRWEQYGPELLRLKDRHQRDFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M + Sbjct: 121 ELSSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQETYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y +F RLGL P++A++G IGG SHEF VLA++GE V S D+ E Sbjct: 181 YTNVFTRLGLDFRPVQADTGSIGGSYSHEFHVLAESGEDDVIFSDS-SDYAANIEKA 236 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 114/207 (55%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ + V RGIEVGHIF GTKYS + Sbjct: 364 DDKHYFGVNWERDLPVPQVADLRNVVEGDPSPDGQGTLVIKRGIEVGHIFQLGTKYSEAL 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK + MG YGIG RVVAA IE S+D KGIIW D++APF+I+L+ ++ Sbjct: 424 KCQVLGENGKPVVLSMGCYGIGVSRVVAAAIEQSYDDKGIIWNDALAPFQIALVPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 V R+A +K+YA L+ G +V DD + G +FA +L+G P +++V + +++ + Sbjct: 484 DVVREATDKLYAELTAAGYEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNL 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E KHR + + L EV+ + R Sbjct: 544 EYKHRTEQDAQALPLNEVLTFLQARVR 570 >gi|328912917|gb|AEB64513.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens LL3] Length = 653 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 82/432 (18%), Positives = 159/432 (36%), Gaps = 32/432 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L + +G+ WLP G + I +++ G Sbjct: 245 LRMLEEAKERDHRKLGKELKLFAN-SQKVGQGLPLWLPKGATIRRVIERYIVDKELSLGY 303 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S DL+ SG ++ Y M + +++ ++ P + I++ I SYR Sbjct: 304 EHVYTPVLGSKDLYETSGHWEHYQDGMFPPMEMDNETLVLRPMNCPHHMMIYKQDIHSYR 363 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K + + ++ Sbjct: 364 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEEFIRTVRLIQDVYE 423 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIISL 245 GL R D +T+ + D M S D+I Sbjct: 424 DFGLSDYTFRLS--------------YRDPEDTEKYFDDDDMWNKAQSMLKAAMDEIGHD 469 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y DV ++ ++ + + +S ++ F ++ T+ G Sbjct: 470 YYEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LTYVGE 518 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DGK H + G + + + + P +AP + +I + V D Sbjct: 519 DGKQHRPVVIHR--GVVSTMERFVAFLIEEHKGALPTWLAPVQFQVIPVSP--SVHLDYA 574 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +K+ RL + G V D E+IG + A + P ++VG + + V ++ Sbjct: 575 KKVQERLQREGLRVELDSRDEKIGYKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQK 634 Query: 426 REDMSLEEVINY 437 E +SL++ + Sbjct: 635 SETVSLDDFVKK 646 >gi|296332117|ref|ZP_06874581.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675488|ref|YP_003867160.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] gi|296150888|gb|EFG91773.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413732|gb|ADM38851.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] Length = 643 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 86/433 (19%), Positives = 161/433 (37%), Gaps = 34/433 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L + +G+ WLP G + I +++ G Sbjct: 235 LRMLEEAKERDHRKLGKELKLFAN-SQKVGQGLPLWLPKGATIRRVIERYIVDKEISLGY 293 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG +D Y + M + +++ ++ P + I++ I SYR Sbjct: 294 EHVYTPVLGSKELYETSGHWDHYQEGMFPPMEMDNETLVLRPMNCPHHMMIYKQDIHSYR 353 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP ++ R E+ G+ R R + DA+ F + + ++ Sbjct: 354 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTVR-LIQDVY 412 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIIS 244 GL R D +T+ + D M S D+I Sbjct: 413 EDFGLSDYTFRLS--------------YRDPEDTEKYFDDDEMWNKAQSMLKEAMDEIGH 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ ++ + + +S ++ F ++ T+ G Sbjct: 459 DYYEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LTYIG 507 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DGK H + G + + + + P +AP + +I + V D Sbjct: 508 EDGKQHRPVVIHR--GVVSTMERFVAFLIEEHKGALPTWLAPVQFQVIPVSP--SVHLDY 563 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +K+ RL + G V D E+IG + A + P ++VG + + V ++ Sbjct: 564 AKKVQERLQREGLRVEVDSRDEKIGYKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQ 623 Query: 425 IREDMSLEEVINY 437 E +SL++ + Sbjct: 624 NSETISLDDFVKK 636 >gi|312864463|ref|ZP_07724694.1| threonine--tRNA ligase [Streptococcus downei F0415] gi|311099590|gb|EFQ57803.1| threonine--tRNA ligase [Streptococcus downei F0415] Length = 651 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 81/448 (18%), Positives = 162/448 (36%), Gaps = 36/448 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L L+E RD +L L MI + +G+ WLP G + I + + Sbjct: 229 KAYLKRLEEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPDGATIRRTIERYITDREV 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSH 121 +G + P + S DL+ SG +D Y ++M D D + P + ++++H Sbjct: 287 ASGYQHVYTPPIASVDLYKTSGHWDHYREDMFPTMDMGDGEAFVLRPMNCPHHIQVYKNH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP ++ + R E ++ + + + + + + + Sbjct: 347 VHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVEDEFKQTLQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ + R + ADT + F + + DD Sbjct: 407 IDVYEDFNITDYSFRLS-----------YRDPADT--HKYFDDDEMWEKSQRMLKAAMDD 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L ++ +S ++ F ++ T Sbjct: 454 MGLDYYEAEGEAAFYGPKLDI---QVKTALGNDETLSTIQLD----FLLPERF----ELT 502 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + GADG++H + + M A + ++ G W I ++ Sbjct: 503 YIGADGEEHRPVMIHRGIVSTMERFTAYLIETYKGAFPTWLAPHQVT-----VIPVSNEA 557 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ L G V D+ E++ + + P Q+IVG K ++D V ++ Sbjct: 558 HADYAWEVAKELRNHGVRVDVDERNEKMQYKIRQSQTHKIPYQLIVGDKEMADKSVNVRR 617 Query: 421 RLTGIREDMSLEEVINYASHRF-SNNRP 447 + SL E ++ +RP Sbjct: 618 YGSKQTHTESLNEFVDNIQADIARKSRP 645 >gi|295399484|ref|ZP_06809466.1| threonyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93] gi|312109958|ref|YP_003988274.1| threonyl-tRNA synthetase [Geobacillus sp. Y4.1MC1] gi|294978950|gb|EFG54546.1| threonyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93] gi|311215059|gb|ADP73663.1| threonyl-tRNA synthetase [Geobacillus sp. Y4.1MC1] Length = 644 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 80/440 (18%), Positives = 162/440 (36%), Gaps = 30/440 (6%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L LQE RD +L L + +G+ WLP G + I +++ G Sbjct: 234 YLRQLQEAKERDHRKLGKELELFMT-SQKVGQGLPLWLPKGATVRRIIERYIVDKEIELG 292 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P L S +L+ SG +D Y + M + +++ ++ P + I+++ I SY Sbjct: 293 YQHVYTPVLGSVELYKTSGHWDHYKENMFPPMEMDNEQLVLRPMNCPHHMMIYKNKIHSY 352 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 R LP ++ R E+ ++ + + + P+ K + ++ L ++ Sbjct: 353 RELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFKRVVNLILEVY 412 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 GL R + + + + D++ Sbjct: 413 KDFGLDEYSFRLSYRDPHDKE-------------KYYDDDEMWEKAQSMLREAMDELGLE 459 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y DV ++ +L +++ +S ++ F ++ T+ G Sbjct: 460 YYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFD----LTYIGE 508 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DGK H + G + + + + +P +AP ++ +I + + D Sbjct: 509 DGKPHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVEVIPVSP--EAHLDYA 564 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 K+ L G V D E+IG + A + P ++VG K ++++ V ++ Sbjct: 565 YKVKETLQSQGFRVEVDGRDEKIGYKIREAQIQKIPYMLVVGDKEMAENAVNVRKYGEQK 624 Query: 426 REDMSLEEVINYASHRFSNN 445 E M+L + I N Sbjct: 625 SETMALADFIAALKAEVRRN 644 >gi|260891090|ref|ZP_05902353.1| threonine--tRNA ligase [Leptotrichia hofstadii F0254] gi|260859117|gb|EEX73617.1| threonine--tRNA ligase [Leptotrichia hofstadii F0254] Length = 636 Score = 254 bits (648), Expect = 3e-65, Method: Composition-based stats. Identities = 79/440 (17%), Positives = 162/440 (36%), Gaps = 44/440 (10%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + +H G ++P G + + + I R E + G Sbjct: 230 YLTMMEEAEKRDHRKLGKQLDLF--FVDEHGPGFPFFMPKGVELFNKLQEIWRVEHKKRG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + +LW SG + +Y + M ++K P + +++++ SY Sbjct: 288 YQEIKTPIMLDKELWEISGHWFNYRENMYTST-IDEKEYAIKPMNCPGSIIAYKNNLHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 ++LP + ++ L R E G+MR R F DA+ F T E + ++ Y + Sbjct: 347 KDLPLKYGEMGLVHRHEFSGALHGLMRVRAFTQDDAHVFC-TKEQIEEQIIEIIDLYDKF 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G E+ + T + S + + + + + Sbjct: 406 YTVFG------------------FEYHIELSTKPDKAIGSDEIWEMAEANLKSALEHKGI 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y D K+ DS+ + ++ F ++ ++ G Sbjct: 448 NYKLNPGDGAFYGPKIDF---KMKDSIGRIWQCGTIQLD----FNLPARF----EMSYIG 496 Query: 305 ADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 ADG+ H M + R + +IE A Sbjct: 497 ADGEKHEPVMIHRAMYGSLERFIGILIEHYAGAFPTWLAPVQARILTI-------SDEQV 549 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEIKHR 421 ++++ +L G V D E+IG + A+ P+Q+I+G V++++V ++ Sbjct: 550 PFAKELFTKLQDAGIRVELDTRVEKIGYKIREANGDQKIPVQLIIGKNEVANNEVNVRRF 609 Query: 422 LTGIREDMSLEEVINYASHR 441 + +++S++E+I Sbjct: 610 GSQDSKNISVDEIIKTLKQE 629 >gi|229190445|ref|ZP_04317445.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 10876] gi|228593058|gb|EEK50877.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 10876] Length = 640 Score = 254 bits (648), Expect = 3e-65, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 155/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 KYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TP+ + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPKQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + + +G++ A++ G W + + I + V Sbjct: 501 DENNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHE 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +I +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYANEIAHKLAQAGVRVEQDARDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E ++L+ + N + Sbjct: 616 EEKSEVIALDVFVASIEEEIKNRK 639 >gi|157693298|ref|YP_001487760.1| threonyl-tRNA synthetase [Bacillus pumilus SAFR-032] gi|157682056|gb|ABV63200.1| threonine--tRNA ligase [Bacillus pumilus SAFR-032] Length = 646 Score = 254 bits (648), Expect = 3e-65, Method: Composition-based stats. Identities = 85/433 (19%), Positives = 161/433 (37%), Gaps = 34/433 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L + +G+ WLP G + I +++ R G Sbjct: 238 LRLLEEAKERDHRKLGKELKLFAN-SQKVGQGLPLWLPKGATIRRVIERYIVDKEVRLGY 296 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L + +L+ SG + Y ++M + + +++ ++ P + I+++ SYR Sbjct: 297 EHVYTPVLANVELYKTSGHWAHYQEDMFPVMEMDNEDLVLRPMNCPHHMMIYKNEPHSYR 356 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP ++ R E+ G+ R R + DA+ F + + ++ Sbjct: 357 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTVR-LIEEVY 415 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIIS 244 GL R D +T+ + D M S D++ Sbjct: 416 QDFGLNDYTFRLS--------------YRDPEDTEKYFDDDAMWNKAQSMLKDAMDELGH 461 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ +L + + +S ++ F ++ T+ G Sbjct: 462 DYYEAEGEAAFYGPKLDV---QVKTALGKEETLSTVQLD----FLLPERFD----LTYIG 510 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DGK H + G + + + + P +AP + +I + V D Sbjct: 511 EDGKHHRPVVIHR--GVVSTMERFVAFLIEEYKGALPTWLAPVQFQVIPVSP--SVHLDY 566 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +K+ RL G V D E+IG + A + P ++VG + + V ++ Sbjct: 567 AKKVQERLQLEGLRVELDSRDEKIGYKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQ 626 Query: 425 IREDMSLEEVINY 437 E M LE + + Sbjct: 627 DSETMDLEAFVKH 639 >gi|169634342|ref|YP_001708078.1| threonyl-tRNA synthetase [Acinetobacter baumannii SDF] gi|238688108|sp|B0VKJ4|SYT_ACIBS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|169153134|emb|CAP02213.1| threonyl-tRNA synthetase [Acinetobacter baumannii] Length = 640 Score = 254 bits (648), Expect = 3e-65, Method: Composition-based stats. Identities = 77/441 (17%), Positives = 142/441 (32%), Gaps = 38/441 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD L L + + + G+ W G + +R+ Q G Sbjct: 231 YIKRIEEAENRDHRKIGKALDLF--HMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +Y + M + P + +F +KSY Sbjct: 289 YQEIKTPQIVDFTLWEKSGHAANYAENMFT-THSESRNYAVKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + K L + Sbjct: 348 RDLPIRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGKE-VADFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + M+ + P D S D Sbjct: 407 YKDFGFEEVQMKLSTRPEKR-----------------VGDDALWDLAEKSLADALDAAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + + F + Sbjct: 450 EWELQPGEGAFYGPKIEF---SLKDCLGRVWQCGTIQCD----FNLPVRLDASY---VTE 499 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + +D V + +G+ ++ + P ++P + ++NI +A Sbjct: 500 ENERDQPVMLHRAILGSFERFIGILI---EHYAGFMPPWLSPVQACVMNITDS---QAEA 553 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++ A+L + G D E+IG + L P +++G + V + V ++ R Sbjct: 554 SEQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGK 613 Query: 425 IREDMSLEEVINYASHRFSNN 445 MS++ I+ + Sbjct: 614 NLGTMSVDAFIDLVKSAVAER 634 >gi|331007686|ref|ZP_08330821.1| Prolyl-tRNA synthetase [gamma proteobacterium IMCC1989] gi|330418506|gb|EGG93037.1| Prolyl-tRNA synthetase [gamma proteobacterium IMCC1989] Length = 579 Score = 254 bits (648), Expect = 3e-65, Method: Composition-based stats. Identities = 123/282 (43%), Positives = 176/282 (62%), Gaps = 2/282 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR G++ + + G+Y+W+PLG + L V IIREE Sbjct: 1 MRASRFLLSTSKETPADAEVISHQLMLRAGLVRKLASGLYTWMPLGLRVLRKVEHIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GA E+ +P +Q A+LW ESGR+ YG E+LR+ DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNKSGAQEVLMPVVQPAELWQESGRWQEYGPELLRIKDRHQREFCLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFG+MRSREF+MKDAYSF + + +Y+ M + Sbjct: 121 DVNSYKQLPANFYQIQTKFRDEIRPRFGIMRSREFIMKDAYSFHIDQASLQDTYDVMHQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R+GL P+ A++G IGG SHEF VLA +GE + S D+ E + Sbjct: 181 YCNIFDRIGLDYRPVIADNGSIGGSGSHEFHVLASSGEDDIAFSD-GSDYAANVEMAEAI 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 + + + + T A E + D L + S + + Sbjct: 240 ETNTRKAATAELTE-VATPDQQTIEAVCDFLNLTPQQSVKTL 280 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 68/195 (34%), Positives = 106/195 (54%), Gaps = 4/195 (2%) Query: 251 QWTAPYAATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + D+ N + D + RGIEVGHIF GTKYS M+AT +GK Sbjct: 383 ERDCDLGEVVDIRNVMVGDPSPCGKGTLDIKRGIEVGHIFQLGTKYSESMNATVLDQNGK 442 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEK 367 + MG YGIG RVVAA IE +HD GIIWP ++APF+++LI I A + C+ Sbjct: 443 AQAITMGCYGIGVTRVVAAAIEQNHDDNGIIWPSALAPFQVALIPINAHKSAAVSEKCDV 502 Query: 368 IYARLSKVGCDVFW-DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 +Y L G DV + D+ ++G A +L+G P +++VG + + + +VE K R + Sbjct: 503 LYKELQAAGYDVIYMDEPKARLGVMLADTELVGIPHRIVVGDRGLENGQVEYKGRRDSEK 562 Query: 427 EDMSLEEVINYASHR 441 +++ V+++ + + Sbjct: 563 QEIDAGSVVDFLTAQ 577 >gi|327470637|gb|EGF16093.1| threonine--tRNA ligase [Streptococcus sanguinis SK330] Length = 645 Score = 254 bits (648), Expect = 3e-65, Method: Composition-based stats. Identities = 76/445 (17%), Positives = 153/445 (34%), Gaps = 32/445 (7%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 KY + RD +L L MI + +G+ WLP G + I +++ Sbjct: 228 LKKYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATVRRELERYIVDKE 285 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRS 120 +G + P L S +L+ SG ++ Y ++M D D + + P + +++ Sbjct: 286 LASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKH 345 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SYR LP +I + R E ++ + + +TPE + + + Sbjct: 346 HVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQL 405 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + ++ L R + D E + D Sbjct: 406 IIDVYADFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALD 452 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 453 EMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD----L 501 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + GADG++H M G+ + I + + + I ++ Sbjct: 502 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEA 557 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ +L G D+ E++ + + P Q+IVG K V DS V ++ Sbjct: 558 HIDYAWQVAKKLRDKGVRADVDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDSTVNVRR 617 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 + ++E + +N Sbjct: 618 YGQKETHTIPVDEFVEQILADIANK 642 >gi|149378080|ref|ZP_01895802.1| prolyl-tRNA synthetase [Marinobacter algicola DG893] gi|149357649|gb|EDM46149.1| prolyl-tRNA synthetase [Marinobacter algicola DG893] Length = 577 Score = 254 bits (648), Expect = 3e-65, Method: Composition-based stats. Identities = 121/237 (51%), Positives = 161/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y + +E P DAEI SH++MLR GMI + + G+YSWLP+G + L V I+REE Sbjct: 1 MRASRYLIATQKETPADAEIISHQMMLRAGMIRKLASGLYSWLPMGLRVLRKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +++GA E+ +P +Q A+LW ESGR++ YG E+LR+ DR+ + +GPTHEEV+TD+ R+ Sbjct: 61 MDKSGAQEVLMPAVQPAELWQESGRWEQYGGELLRMNDRHGRDFCFGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE RPRFGVMR+REF+MKDAYSF + E +Y M + Sbjct: 121 ELKSYKELPANFYQIQTKFRDERRPRFGVMRAREFIMKDAYSFHVNAESLNDTYQVMHRT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF RLGL P+ A+SG IGG SHEF VLA +GE + D+ E Sbjct: 181 YCAIFDRLGLDYRPVEADSGAIGGSASHEFHVLASSGEDAIVF-STDSDYAANIEKA 236 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 70/191 (36%), Positives = 107/191 (56%), Gaps = 3/191 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A D+ + D P+ K RGIEVGHIF G KYS M+AT +GK Sbjct: 378 ERDVALARVEDLRDVVEGDPSPDGKGTLEIRRGIEVGHIFKLGNKYSKAMNATVLDENGK 437 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 ++MG YGIG R+VA+ IE +HD KGIIWPD++APF+++++ + A EK Sbjct: 438 SAILEMGCYGIGVSRIVASSIEQNHDDKGIIWPDAIAPFEVAIVTLNGHKSPAVMAAGEK 497 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +Y +L + G DV DD E+ G +FA +L+G P + +V + ++ +E K R ++ Sbjct: 498 LYEQLRQAGFDVLLDDRNERPGVKFADMELIGIPHRFVVSERGLAAETLEYKGRRDEDKQ 557 Query: 428 DMSLEEVINYA 438 D+ L E + + Sbjct: 558 DIPLAEALPFL 568 >gi|302335586|ref|YP_003800793.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Olsenella uli DSM 7084] gi|301319426|gb|ADK67913.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Olsenella uli DSM 7084] Length = 588 Score = 254 bits (648), Expect = 3e-65, Method: Composition-based stats. Identities = 83/438 (18%), Positives = 151/438 (34%), Gaps = 43/438 (9%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD ++ L M+ + G WLP G + + + +E Q+R G ++ Sbjct: 190 EAEKRDHRKIGKEMGLF--MMSEAGPGFPFWLPNGMRVRNALMDYWQEMQDRFGYEQVQT 247 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + S LW SG +D Y M +D+ P + +++S +SYR+LP Sbjct: 248 PIILSRTLWETSGHWDHYKDNMYT-TQIDDEDFAIKPMNCPGACLVYKSKPRSYRDLPLK 306 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + L R EL+ G+ R REF DA+ F + ++ + + ++ Sbjct: 307 LAEAGLDHRHELKGALHGLFRVREFTQDDAHLFIRPDQITEQVTDTA--HLITTYYAQFG 364 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + + P S E A+ G D + + E Sbjct: 365 FPYHVELSTRPEDSMGSDEDWERAEQG-----------------LRDALDSMGVDYIVNE 407 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KD 309 A Y D H L D L + ++ F + DG K Sbjct: 408 GDGAFYGPKIDFH---LQDCLGRTWQCGTIQLDFQLPHNFQ--------LEYTAPDGSKQ 456 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + + G G+ ++ ++GK W + + + RD ++ Sbjct: 457 QPIMIHRAGFGSFERFIGMLIEQYEGKFPTW------LSPCQVKVLPVSEKTRDYALEVA 510 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVA-DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 L G V D E+IG + A P +I+G K + + ++ R + Sbjct: 511 RTLRAAGVRVKVDVRDEKIGYKIREARSADRVPYMLILGEKEAEANNISVRDR-SNETHQ 569 Query: 429 MSLEEVINYASHRFSNNR 446 +LE+ + + + R Sbjct: 570 ATLEDFVTEITAEIRDRR 587 >gi|302381720|ref|YP_003817543.1| threonyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264] gi|302192348|gb|ADK99919.1| threonyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264] Length = 639 Score = 254 bits (648), Expect = 3e-65, Method: Composition-based stats. Identities = 77/438 (17%), Positives = 144/438 (32%), Gaps = 39/438 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L I + RD ++ L + + +G+ W P G + A +R + G Sbjct: 232 YLLRIEEAEKRDHRKLGRQMELF--HMQEEGRGMVFWHPKGWILWQVIEAYMRRRLDAAG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + W SG ++ Y M + + P + IF +SY Sbjct: 290 YVEVKTPQVLDRKFWEASGHWEKYRPNMFVCETVEGETLSLKPMNCPGHVQIFGIGQRSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R E G+MR R F DA+ F + + + + + Sbjct: 350 RELPLRMAEFGACHRYEPSGALHGLMRVRGFTQDDAHIFCREDQIVEET-RRFIELTRIV 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 LG+++ + + P S EF D Sbjct: 409 HADLGMQTAYINLATRPDVRAGSDEF-----------------WDKAEGMLGEAARLAGV 451 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A YA D + D++ ++ ++A + G Sbjct: 452 DPVIAEGDGAFYAPKLDF---VVKDAIGREWTCGTLQLDYVLP--------ERLNAEYVG 500 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + +G+ ++ ++ G +W V ++ Sbjct: 501 EDGQKHRPVMLHRAILGSFERFIGIMIENYAGAFPLWLAPVQAVVATIT------SDADG 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E++ A+ G V D E++G + + P+ +VG +V I+ + Sbjct: 555 YAEEVAAKFKAAGLRVETDLRNEKVGYKVREHSVGKVPVIAVVGRNEAEQGQVAIRRLGS 614 Query: 424 GIREDMSLEEVINYASHR 441 + +S+EE I + Sbjct: 615 QAQTVVSVEEAIRILTEE 632 >gi|332653846|ref|ZP_08419590.1| threonine--tRNA ligase [Ruminococcaceae bacterium D16] gi|332516932|gb|EGJ46537.1| threonine--tRNA ligase [Ruminococcaceae bacterium D16] Length = 589 Score = 254 bits (648), Expect = 3e-65, Method: Composition-based stats. Identities = 87/442 (19%), Positives = 153/442 (34%), Gaps = 41/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L M+ G +LP G + + R+ + G Sbjct: 182 YLQRIEEAKKRDHRKLGKELGLF--MLRDEGPGFPFFLPKGMTLKNTLLDYWRQIHKKYG 239 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+S P + + LW SG +D Y + M + + P + ++ S SY Sbjct: 240 YVEISTPIILNRQLWERSGHWDHYKQNMYT-TVIDGEDFAIKPMNCPGGMLVYASEPHSY 298 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP +I L R EL G+ R R F DA+ F + ++ Sbjct: 299 RELPLRVGEIGLVHRHELSGALHGLFRVRCFSQDDAHVFMTREQMKD---------VIQE 349 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 RL + S I E + + + + D+ Sbjct: 350 TVRLFDEVYSTFGLSYTIELSTMPEDHI----------GTVEEWEHNQDILKNAITDMGK 399 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D H L DSL R + G I ++ + G Sbjct: 400 EFVINEGDGAFYGPKLDFH---LADSLG-------RTWQCGTI-QLDSQLPERFELEYTG 448 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + +G++ VI + +P +AP ++ ++ + Sbjct: 449 EDGQKHRPVMIHRVVLGSIERFIGVIT---EHFAGAFPAWLAPVQVKILPVTDR---AAA 502 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L + G V D E+IG + A + P ++VG + + ++ V ++ R Sbjct: 503 YADQLSKQLDEAGYRVETDHRNEKIGKKIREATMEKIPYMIVVGDRDMENNTVSVRLRTG 562 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MSL + + Sbjct: 563 EDLGAMSLADFTAKLKAVVDSK 584 >gi|53728893|ref|ZP_00134603.2| COG0441: Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207707|ref|YP_001052932.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20] gi|166223315|sp|A3MYU1|SYT_ACTP2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|126096499|gb|ABN73327.1| threonyl-tRNA synthetase ThrS [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 643 Score = 254 bits (648), Expect = 3e-65, Method: Composition-based stats. Identities = 71/445 (15%), Positives = 139/445 (31%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LAEYLTRLEEAAKRDHRRIGKALDLY--HMQEEAPGLVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + LW +G + +Y +++ ++ P + IF + Sbjct: 287 EYDYQEVKGPFMMDRVLWERTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIRMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G +I ++ + P D Sbjct: 405 YDIYSTFGFSNIQVKLSTRPENR-----------------IGDDAMWDRAEDGLAKALTA 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L D L + ++ A+ Sbjct: 448 NGLSYEIQEGEGAFYGPKIEF---ALRDCLDREWQCGTIQLDFALPGRLD--------AS 496 Query: 302 FKGA-DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +G+ V + +G++ +I + G W +++ Sbjct: 497 YVAEDNGRRTPVMIHRAILGSIERFIGIITEEYAGFFPTWLAPTQAVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ LS G V D E++G + L P ++ G K + KV ++ Sbjct: 551 QADYVQKVTKALSDAGIRVKSDLRNEKVGFKVREHTLRRVPYMLVCGDKEIEAGKVSVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R +++E + ++ Sbjct: 611 RKGADLGTFTIDEFVEILKNQVKAR 635 >gi|325694840|gb|EGD36745.1| threonine--tRNA ligase [Streptococcus sanguinis SK150] Length = 647 Score = 254 bits (648), Expect = 3e-65, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 152/445 (34%), Gaps = 32/445 (7%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 KY + RD +L L MI + +G+ WLP G + I +++ Sbjct: 228 LKKYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATVRRELERYIVDKE 285 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRS 120 +G + P L S +L+ SG ++ Y ++M D D + + P + +++ Sbjct: 286 LASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKH 345 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SYR LP +I + R E ++ + + +TPE + + + Sbjct: 346 HVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQL 405 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + ++ L R + D E + D Sbjct: 406 IIDVYADFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALD 452 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 453 EMDVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD----L 501 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + GADG++H M G+ + I + + + I ++ Sbjct: 502 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEA 557 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ +L G D+ E++ + + P Q+IVG K V D V ++ Sbjct: 558 HIDYAWQVAKKLRDKGVRADVDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVRR 617 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 + ++E + ++ Sbjct: 618 YGQKETHTIPVDEFVEQILADIASK 642 >gi|163940157|ref|YP_001645041.1| threonyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|163862354|gb|ABY43413.1| threonyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] Length = 639 Score = 254 bits (648), Expect = 3e-65, Method: Composition-based stats. Identities = 76/447 (17%), Positives = 154/447 (34%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + +Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 231 KLEEYLHFVEEAAKRNHRELGSELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQ 288 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N E+ P + + +LW +SG + Y M ++ + K+ P + +F++ Sbjct: 289 NEYNYQEVRTPFMMNQELWEKSGHWGHYKDNM-YFSEVDHKSFALKPMNCPGHMLMFKNK 347 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP + R E G++R R F DA+ +TPE + + Sbjct: 348 LHSYRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIQSVLAQ 406 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++ G E+ V T + + Sbjct: 407 IDYVYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAELALENVLQ 448 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + E A Y D H + D+L + + ++ F K+ Sbjct: 449 SLNYKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTVQLD----FQMPEKFD----L 497 Query: 301 TFKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + + + + +G++ A++ G W + + I + Sbjct: 498 NYIDENNEKRRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNA 552 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 V +I +L++ G V D E++G + A + P +++G K + V ++ Sbjct: 553 VHEQYANRIADKLAQAGIRVERDIRDEKLGYKIREAQMQKVPYVLVIGDKEMESEAVNVR 612 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 E + L + N + Sbjct: 613 KYGEEKSEVVELNAFVESMKEEIKNRK 639 >gi|257784431|ref|YP_003179648.1| threonyl-tRNA synthetase [Atopobium parvulum DSM 20469] gi|257472938|gb|ACV51057.1| threonyl-tRNA synthetase [Atopobium parvulum DSM 20469] Length = 588 Score = 254 bits (648), Expect = 3e-65, Method: Composition-based stats. Identities = 88/446 (19%), Positives = 156/446 (34%), Gaps = 43/446 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y I + RD ++ L M+ G WLP G + + E Q Sbjct: 181 LAQYLKMIEEAEKRDHRKIGREMELF--MMSDFGPGSPFWLPNGMALRNALTEYWHEMQA 238 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 R G E+ P + S LW SG +D Y + M +++ P + I++S Sbjct: 239 RFGYQEVQTPLILSRSLWETSGHWDHYKENMYTTT-VDEEDFAIKPMNCPGACLIYKSKP 297 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP + L R E++ G+ R REF DA+ F + ++ + Sbjct: 298 RSYRDLPMKLAEAGLDHRYEMKGALHGLFRVREFTQDDAHLFIRPDQITEQVTDAS--HL 355 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ + + P S E A+ G D Sbjct: 356 ITAYYAQFGFPYRVELSTRPEDSMGSDEDWERAEQG-----------------LRDALDA 398 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + E A Y D H L D L + + ++ F Sbjct: 399 MGIDYVVNEGDGAFYGPKIDFH---LTDCLGRSWQCGTIQLDFQLPHNFQ--------LE 447 Query: 302 FKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +DG K + + G G+ ++ +++GK +W + I + Sbjct: 448 YIDSDGTKKQPIMIHRAGFGSFERFIGILTENYEGKFPVW------LSPCQVKILPVSEK 501 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA-DLLGFPLQVIVGSKFVSDSKVEIK 419 R ++ +L+ G V DD E+IG + A L P +I+G + V + ++ Sbjct: 502 SRSYAHEVADKLAAAGIRVKVDDRDEKIGYKIREARSLDRVPYMLILGEQEVEAGNISVR 561 Query: 420 HRLTGIREDMSLEEVINYASHRFSNN 445 R + L+E I S Sbjct: 562 DR-SNETHAAELDEFIAQVVKENSER 586 >gi|253989346|ref|YP_003040702.1| threonyl-tRNA synthetase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780796|emb|CAQ83958.1| threonyl-tRNA synthetase [Photorhabdus asymbiotica] Length = 642 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 67/446 (15%), Positives = 140/446 (31%), Gaps = 40/446 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 + Y + + RD +L L + + + G+ W G + +R + Sbjct: 229 LNTYLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMAFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + +W +G +++Y + M ++ P + IF + Sbjct: 287 EYQYQEVKGPFMMDRVMWERTGHWENYNEHMFT-TSSENREYCVKPMNCPGHIQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F + + + Sbjct: 346 KSYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIHRE-VSNCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G + I ++ + P + E A+ S + Sbjct: 405 YDVYSTFGFEKIVVKLSTRPEKRIGTEEQWNQAE-----------------ESLAAALQE 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 A Y + L D L + ++ G A+ Sbjct: 448 NGVQFEYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFSLPSRLG--------AS 496 Query: 302 FKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G + + V + +G++ ++ + G W + + Sbjct: 497 YVGENNERKVPVMIHRAVLGSLERFIGILTEEYAGFFPTW------IAPQQVVVMNITDG 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +++ + + G D E+IG + L P ++ G K V K+ ++ Sbjct: 551 QADYVQELAKKFQESGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGEKEVESGKISVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R + + E I + + Sbjct: 611 RRGKDLGSIDVNEFIEKLLIEIRSRK 636 >gi|71898248|ref|ZP_00680422.1| Threonyl-tRNA synthetase, class IIa [Xylella fastidiosa Ann-1] gi|71731987|gb|EAO34044.1| Threonyl-tRNA synthetase, class IIa [Xylella fastidiosa Ann-1] Length = 635 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 75/438 (17%), Positives = 142/438 (32%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + RD L + + G+ W P G + IR +G Sbjct: 233 YMQRLQDAEKRDHRKIGKAQDLF--HLQEEGPGLVFWHPKGWVIWQTIENYIRRVYRNSG 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D+Y + M D + P + +F + SY Sbjct: 291 YGELRCPQILDVSLWQKSGHWDNYKENMF-FTDSEKRTYAVKPMNCPGHVQVFNQGLHSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F T + L++ Sbjct: 350 RDLPIRYGEFGACHRNEPSGALHGLLRVRGFTQDDGHIFC-TEAQIEAEVTAFHRQALQV 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++I ++ P D + + Sbjct: 409 YADFGFENIQIKIALRPDKR-----------------LGDSLSWDKAEAALRSALSACEV 451 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + H L D++ ++ ++ G A + Sbjct: 452 EWQELPGEGAFYGPKIEYH---LKDAIGRTWQLGTIQVDFMMPGRLG--------AEYVD 500 Query: 305 AD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + H V + +G+M ++ + IWP +AP ++ + NI + Sbjct: 501 ERSQRRHPVMLHRAIVGSMERFIGILI---EHYAGIWPTWLAPVQVVIANIT---DAQYE 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E+++ L G V D E+IG + L P ++VG + + V ++ Sbjct: 555 YAEQVHKALLNQGFRVNIDLRNEKIGYKIREHTLQRVPYLLVVGDREKENGTVAVRTCSR 614 Query: 424 GIREDMSLEEVINYASHR 441 MS+ + Sbjct: 615 EDLGAMSISAFVERLQTE 632 >gi|212638370|ref|YP_002314890.1| threonyl-tRNA synthetase [Anoxybacillus flavithermus WK1] gi|226701399|sp|B7GGN9|SYT_ANOFW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|212559850|gb|ACJ32905.1| Threonyl-tRNA synthetase [Anoxybacillus flavithermus WK1] Length = 643 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 86/443 (19%), Positives = 159/443 (35%), Gaps = 38/443 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +LQE RD +L L + +G+ WLP G + I +++ G Sbjct: 234 YLRLLQEAKERDHRKLGKELDLFMT-SQKVGQGLPLWLPKGATIRRTIERYIVDKELSLG 292 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P L S +L+ SG +D Y M + +++ ++ P + +++ I SY Sbjct: 293 YQHVYTPVLGSVELYKTSGHWDHYKDGMFPPMEMDNEQLVLRPMNCPHHMMVYKHKIHSY 352 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP ++ R E+ G+ R R + DA+ F + + ++ L + Sbjct: 353 RELPIRIAELGTMHRYEMSGALTGLQRVRGMTLNDAHIFVRPDQIKDE-FKRVVNLILDV 411 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDII 243 + GL R D + + + D M S D++ Sbjct: 412 YKDFGLTDYSFRLS--------------YRDPQDKEKYYDDDAMWEKAQSMLKEAMDELG 457 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 E A Y DV ++ +L +++ +S ++ F ++ T+ Sbjct: 458 LDYYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFD----LTYI 506 Query: 304 GADGKDHYVQMGSYGIG--AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DGK H + G+ R VA +IE +I Sbjct: 507 GEDGKPHRPVVIHRGVVSTMERFVAFLIEEYKGAFPTWLAPIQVQVIPVAPSI------H 560 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ L G V D+ E+IG + A + P ++VG V++ V ++ Sbjct: 561 MDYAYEVKHALQVAGIRVEVDEREEKIGYKIREAQMQKIPYMLVVGDNEVNERAVNVRKY 620 Query: 422 LTGIREDMSLEEVINYASHRFSN 444 E M L+ ++ + Sbjct: 621 GEQKSETMPLDAFVDSIAKEVRK 643 >gi|307245030|ref|ZP_07527126.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307253984|ref|ZP_07535834.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258439|ref|ZP_07540179.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306854073|gb|EFM86282.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306863062|gb|EFM95006.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867501|gb|EFM99349.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 643 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 71/445 (15%), Positives = 139/445 (31%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LAEYLTRLEEAAKRDHRRIGKALDLY--HMQEEAPGLVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + LW +G + +Y +++ ++ P + IF + Sbjct: 287 EYDYQEVKGPFMMDRVLWERTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIRMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G +I ++ + P D Sbjct: 405 YDIYSTFGFSNIQVKLSTRPENR-----------------IGDDAMWDRAEDGLAKALTA 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L D L + ++ A+ Sbjct: 448 NGLSYEIQEGEGAFYGPKIEF---ALRDCLDREWQCGTIQLDFALPGRLD--------AS 496 Query: 302 FKGA-DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +G+ V + +G++ +I + G W +++ Sbjct: 497 YVAEDNGRRTPVMIHRAILGSIERFIGIITEEYAGFFPTWLAPTQAVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ LS G V D E++G + L P ++ G K + KV ++ Sbjct: 551 QADYVQKVTKALSDAGIRVKSDLRNEKVGFKVREHTLRRVPYMLVCGDKEIEAGKVSVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R +++E + ++ Sbjct: 611 RKGADLGTFTIDEFVEILKNQVKAR 635 >gi|302024085|ref|ZP_07249296.1| threonyl-tRNA synthetase [Streptococcus suis 05HAS68] gi|330832440|ref|YP_004401265.1| threonyl-tRNA synthetase [Streptococcus suis ST3] gi|329306663|gb|AEB81079.1| threonyl-tRNA synthetase [Streptococcus suis ST3] Length = 649 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 89/449 (19%), Positives = 177/449 (39%), Gaps = 38/449 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KAYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRTLERYITDKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG ++ Y ++M D D + + P + ++++H Sbjct: 287 TSGYQHVYTPPLASVELYKTSGHWEHYSEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKNH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP ++ + R E G+ R RE + D + F TPE + + K Sbjct: 347 VRSYRELPVRIAELGMMHRYEKSGALTGLQRVREMTLNDGHIFV-TPEQIQEEFKKALQL 405 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSENTDF 239 + ++ L R D + + + + + + Sbjct: 406 IIDVYADFNLNDYRFRLS--------------YRDPEDKEKYYDNDEMWENAQRMLKGAM 451 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 452 DEMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERF----G 500 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 T+ GADG++H M G+ + I + +P +AP ++++I I + Sbjct: 501 LTYIGADGEEHRPVMIHRGVISTMERFTAILI--ETYKGAFPTWLAPTQVTMIPISV--E 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D K+ L G V D+ E++ + + P Q+IVG K + D+ V ++ Sbjct: 557 AHLDYAWKVAKELQDRGVRVHVDERNEKMQYKIRQSQTSKIPYQLIVGDKEMEDNAVNVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRF-SNNRP 447 + + S+ E +++ +RP Sbjct: 617 RYGSKATQTQSVAEFVDHILADIARKSRP 645 >gi|229543582|ref|ZP_04432642.1| threonyl-tRNA synthetase [Bacillus coagulans 36D1] gi|229328002|gb|EEN93677.1| threonyl-tRNA synthetase [Bacillus coagulans 36D1] Length = 640 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 79/438 (18%), Positives = 161/438 (36%), Gaps = 32/438 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E RD +L L T + +G+ WLP G + I +++ + G Sbjct: 232 LKFLEEAKERDHRKIGKELELFTN-SQKVGQGLPLWLPKGATIRRTIERYIVDKEVKLGY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S DL+ SG +D Y ++M + +++ ++ P + ++++ I SYR Sbjct: 291 DHVYTPVLGSVDLYKTSGHWDHYQEDMFPVMKMDNEELVLRPMNCPHHMMVYKNTIHSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ L R E+ ++ + + + P+ K + ++ L ++ Sbjct: 351 ELPIRIAELGLMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEEFKRVVELILEVYK 410 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIISL 245 + R D T + D M + DD Sbjct: 411 DFNITDYSFRLS--------------YRDPENTDKYYDDDEMWNKAQAMLKETMDDFGFD 456 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y DV ++ +L +++ +S ++ F ++ T+ G Sbjct: 457 YYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFD----LTYVGE 505 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DGK H + G + + + + +P +AP ++ +I + D Sbjct: 506 DGKPHRPVVIHR--GVVSTMERFVAYLIEEYKGAFPTWLAPIQVQVIPVSP--DAHYDYA 561 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 K+ L G D E++G + A + P +IVG + +D+ V ++ Sbjct: 562 RKVQEALKAEGVRAELDARDEKLGYRIREAQVQKIPYALIVGDQEATDNAVNVRKYGEKQ 621 Query: 426 REDMSLEEVINYASHRFS 443 E + ++ ++ Sbjct: 622 TETVPVDTFLSKIKEEIK 639 >gi|49479942|ref|YP_036488.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|218903521|ref|YP_002451355.1| threonyl-tRNA synthetase [Bacillus cereus AH820] gi|228927442|ref|ZP_04090498.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229121934|ref|ZP_04251153.1| Threonyl-tRNA synthetase [Bacillus cereus 95/8201] gi|49331498|gb|AAT62144.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|218538936|gb|ACK91334.1| threonyl-tRNA synthetase [Bacillus cereus AH820] gi|228661583|gb|EEL17204.1| Threonyl-tRNA synthetase [Bacillus cereus 95/8201] gi|228832235|gb|EEM77816.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 639 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 72/444 (16%), Positives = 156/444 (35%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ ++L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGNELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TPE + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G K + + P + S + Sbjct: 410 VYKTFGFKYE-VELSTRPEDS-----------------MGDDKLWEQAEASLENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + I + V Sbjct: 501 DEKNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHV 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++ +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYADEVADKLAQAGVRVERDMRDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 + + L+ + +N + Sbjct: 616 EEKSDVIELDMFVESMKEEINNRK 639 >gi|308513249|ref|YP_003474861.2| threonine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|307346955|gb|ADC90325.2| threonine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 646 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 81/444 (18%), Positives = 145/444 (32%), Gaps = 43/444 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD ++ L M + G +LP G + + RE R Sbjct: 230 YLAKLEEAKRRDHRKLGKEMNLF--MFSEEGPGFPFFLPNGMILKNTLLDYWREVHRRED 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+S P + + LW SG + Y M +D+ P + F+S I SY Sbjct: 288 YREISTPIMLNRHLWETSGHWFHYRDNMYT-TVIDDEDFAIKPMNCPGSMLTFKSTIHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R E G+MR R F DA+ F + + + Sbjct: 347 RDLPLRLAELGLVHRHEKSGVLHGLMRVRAFTQDDAHIFMTPDQIRDEIKRVVRLI---- 402 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + ++ + T + + + + +D+ Sbjct: 403 ---------------DEVYHHFNFKYHIELSTRPEDSMGTDEEWNMATEALRLAVEDLKI 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D H E DSL + ++ F ++ A + G Sbjct: 448 PYVINEGDGAFYGPKLDFHLE---DSLGRTWQCGTIQLD----FQLPQRF----EAEYIG 496 Query: 305 ADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG H + + R + +IE Sbjct: 497 PDGNRHRPIVIHRVVLGSIERFIGILIEHLAGKFPTWLAPVQVRILSI-------SDNQN 549 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 C ++ A L G +DD E+IG + A + P +I+G + +++ +V ++ R Sbjct: 550 SYCSELLAELKNAGIRAEFDDRNEKIGFKVRAAQVEKIPYMLIIGDQEMNEHRVSLRLRD 609 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 + E I+ ++ R Sbjct: 610 RQENIQLPTAEFISKVVAEIADRR 633 >gi|71275167|ref|ZP_00651454.1| Threonyl-tRNA synthetase, class IIa [Xylella fastidiosa Dixon] gi|170731158|ref|YP_001776591.1| threonyl-tRNA synthetase [Xylella fastidiosa M12] gi|238687955|sp|B0U5E3|SYT_XYLFM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|71163976|gb|EAO13691.1| Threonyl-tRNA synthetase, class IIa [Xylella fastidiosa Dixon] gi|167965951|gb|ACA12961.1| threonyl-tRNA synthetase [Xylella fastidiosa M12] Length = 635 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 75/438 (17%), Positives = 141/438 (32%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + RD L + + G+ W P G + IR +G Sbjct: 233 YMQRLQDAEKRDHRKIGKAQDLF--HLQEEGPGLVFWHPKGWVIWQTIENYIRRVYRNSG 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D+Y + M D + P + +F + SY Sbjct: 291 YGELRCPQILDVSLWQKSGHWDNYKENMF-FTDSEKRTYAVKPMNCPGHVQVFNQGLHSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F T + L++ Sbjct: 350 RDLPIRYGEFGACHRNEPSGALHGLLRVRGFTQDDGHIFC-TEAQIEAEVTAFHRQALQV 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++I ++ P D + Sbjct: 409 YADFGFENIQIKIALRPDKR-----------------LGDSLSWDKAEAALRAALSACEV 451 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + H L D++ ++ ++ G A + Sbjct: 452 EWQELPGEGAFYGPKIEYH---LKDAIGRTWQLGTIQVDFMMPGRLG--------AEYVD 500 Query: 305 AD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + H V + +G+M ++ + IWP +AP ++ + NI + Sbjct: 501 ERSQRRHPVMLHRAIVGSMERFIGILI---EHYAGIWPTWLAPVQVVIANIT---DAQYE 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E+++ L G V D E+IG + L P ++VG + + V ++ Sbjct: 555 YAEQVHKALLNQGFRVNIDLRNEKIGYKIREHTLQRVPYLLVVGDREKENGTVAVRTCSR 614 Query: 424 GIREDMSLEEVINYASHR 441 MS+ + Sbjct: 615 EDLGAMSISAFVERLQTE 632 >gi|297588366|ref|ZP_06947009.1| threonine--tRNA ligase [Finegoldia magna ATCC 53516] gi|297573739|gb|EFH92460.1| threonine--tRNA ligase [Finegoldia magna ATCC 53516] Length = 634 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 81/443 (18%), Positives = 162/443 (36%), Gaps = 39/443 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD ++ L + I + G + P G L+ + ++E+ Sbjct: 230 EYLERMEEAKKRDHRKIGKEMGLFS--IQEEGPGFPFFHPNGMVVLNELEKFLKEQLLDR 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G ++ P + + DLW +SG +D Y + M + P + +++ + S Sbjct: 288 GYGQIKTPLILNEDLWHQSGHWDHYKENM-YFTQIDGDDYAIKPMNCPGSILVYKDELHS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP ++ R EL G+ R R F+ DA+ F L PE + K+ Sbjct: 347 YRELPIKVAELGQVHRHELSGALHGLFRVRTFVQDDAHVFCL-PEQIEEEVTKIIDFCDY 405 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I+ + G K + + P S E D I S + + Sbjct: 406 IYSKFGFKYE-VELSTRPEDSMGSDE-----------------DWDLAINSLKSALEHKG 447 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E A Y D H E D++ + ++ F ++ + A+ Sbjct: 448 LEYKINEGDGAFYGPKIDFHLE---DAIGRTWQCGTIQLD----FQMPERFDMTYIAS-- 498 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 K + +G+ ++ + +P ++P ++ ++ I D Sbjct: 499 -DGSKKRPAMIHRAILGSEERFMGILI---EHYAGKFPLWLSPIQVEILPISDK---FND 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ ++ G V DD E+IG + + L +I+G + +++V ++ R Sbjct: 552 YAYELQQKMKARGLRVKVDDRSEKIGLKIRESQLKKVNYSLIIGQNEIDNNEVSVRKRDL 611 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 G + +E I+ + N + Sbjct: 612 GDVGSKNTDEFIDELVDEYQNRK 634 >gi|196043419|ref|ZP_03110657.1| threonyl-tRNA synthetase [Bacillus cereus 03BB108] gi|196025728|gb|EDX64397.1| threonyl-tRNA synthetase [Bacillus cereus 03BB108] Length = 639 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 155/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ ++L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGNELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TPE + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + S + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEASLENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + I + V Sbjct: 501 DEKNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHV 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++ +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYADEVADKLAQAGVRVERDMRDEKLGYKIREAQMQKVPYILVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 + + L+ + N + Sbjct: 616 EEKSDVIELDMFVESIKVEIKNRK 639 >gi|254785039|ref|YP_003072467.1| proline--tRNA ligase [Teredinibacter turnerae T7901] gi|259511626|sp|C5BPN9|SYP_TERTT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|237684457|gb|ACR11721.1| proline--tRNA ligase [Teredinibacter turnerae T7901] Length = 574 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 124/235 (52%), Positives = 169/235 (71%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y + +E P DAE+ SHKLMLR G+I + + G+Y+WLPLG + L V I+R+E Sbjct: 1 MRASQYLIATQKETPADAEVISHKLMLRAGLIRKMASGLYNWLPLGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +++GA E+ +P +Q A++W ESGR+ YG E+LR+ DR+D+A GPTHEEV+TD+ R+ Sbjct: 61 MDKSGAQEVLMPVVQPAEIWQESGRWQQYGPELLRINDRHDRAFCLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF ++ E + +Y+ M + Sbjct: 121 EVKSYKQLPLNFYQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHISQESLQETYDVMHRT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R+GL+ P+ A++G IGG SHEF VLAD+GE + S D DF E Sbjct: 181 YCNIFDRIGLQYRPVLADTGSIGGSASHEFHVLADSGEDDIAFSSD-SDFAANVE 234 Score = 153 bits (386), Expect = 6e-35, Method: Composition-based stats. Identities = 68/194 (35%), Positives = 107/194 (55%), Gaps = 4/194 (2%) Query: 254 APYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A Y+ D+ N + D P K RGIEVGHIF GTKYS M AT +GKD Sbjct: 380 ASYSRVEDLRNVVVGDPSPCGKGTIEIKRGIEVGHIFQLGTKYSAAMKATVLDENGKDVT 439 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYA 370 + MG YGIG R+VA+ IE +HD GIIWPD++APF+++++ I ++ACE +Y Sbjct: 440 MTMGCYGIGVSRIVASAIEQNHDDNGIIWPDAIAPFQLAIVPINMHKSDAVKEACETLYD 499 Query: 371 RLSKVGCDVFW-DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 + G DV D+ ++G+ A +L+G P +V++G + + +E K R +++ Sbjct: 500 QCQTAGIDVLLMDEPKARLGAMLADVELVGIPHRVVIGDRGLEQGNIEYKGRRDAESQEV 559 Query: 430 SLEEVINYASHRFS 443 + + + + + Sbjct: 560 AAASLFEFLREKIA 573 >gi|228933677|ref|ZP_04096525.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826004|gb|EEM71789.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 639 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 72/444 (16%), Positives = 156/444 (35%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ ++L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGNELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TPE + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G K + + P + S + Sbjct: 410 VYKTFGFKYE-VELSTRPEDS-----------------MGDDKLWEQAEASLENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + I + V Sbjct: 501 DEKNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHV 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++ +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYADEVADKLAQAGVRVERDMRDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 + + L+ + +N + Sbjct: 616 EEKSDVIELDMFVESMKEEINNRK 639 >gi|119774900|ref|YP_927640.1| threonyl-tRNA synthetase [Shewanella amazonensis SB2B] gi|166225496|sp|A1S6G4|SYT_SHEAM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|119767400|gb|ABL99970.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Shewanella amazonensis SB2B] Length = 642 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 74/441 (16%), Positives = 144/441 (32%), Gaps = 40/441 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + + + G+ W G + IR + + Sbjct: 233 LARLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWSIFRELETFIRHKLSEYDY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 291 QEVKGPFMMDRVLWERSGHWDKYADAMFT-TASENREYAIKPMNCPGHVQIFNQGLKSYR 349 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F + + + + Y Sbjct: 350 DLPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVQEEVSACIRMVYDTYS 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G ++I ++ + P D D + + Sbjct: 410 T-FGFENIVVKLSTRPEKR-----------------IGDDDMWDRAESALIEALNANGIA 451 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I+ A Y + L D L + ++ G AT+ Sbjct: 452 FEILPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDYALPGRLG--------ATYVAE 500 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D + +G++ ++ + +P +AP + ++NI D Sbjct: 501 DNARQTPVMIHRAILGSLERFIGILI---EEYAGRFPAWLAPVQAVVMNITDK---QADY 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++ + G D E+IG + L P ++VG + + + ++ ++ R Sbjct: 555 VEELVKFFKEQGIRASQDLRNEKIGFKIREHTLRRVPYLLVVGDQEMENREIAVRTRDGK 614 Query: 425 IREDMSLEEVINYASHRFSNN 445 MS++ + + S+ Sbjct: 615 DLGKMSIDAFVASVKEQISHR 635 >gi|124486137|ref|YP_001030753.1| hypothetical protein Mlab_1319 [Methanocorpusculum labreanum Z] gi|124363678|gb|ABN07486.1| threonyl-tRNA synthetase [Methanocorpusculum labreanum Z] Length = 586 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 87/442 (19%), Positives = 149/442 (33%), Gaps = 42/442 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 FL + +E R D ++ L M G +LP G +++ RE G Sbjct: 183 FLKLQEEAERRDHRKIGKEMKLF--MFSDEGPGFPFFLPNGMIVRNSLLDYWRELHAENG 240 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+S P + + LW SG +D Y M +D+ P + ++ + SY Sbjct: 241 YQEISTPLIMNRCLWETSGHWDHYKDNM-YATCIDDEDYCIKPMNCPGGVMVYANEPHSY 299 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP ++ L R EL+ G+ R R F DA+ F + S + + Sbjct: 300 RELPMRLAELGLVHRHELKGTLHGLFRVRCFTQDDAHIFMRKNQISDE-IAGVVRLINEV 358 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + + + P S E + D + Sbjct: 359 YTKFGFEY-FLELSTRPENSMGSDE-----------------DWEAATNGLKDALDLLKL 400 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 +I E A Y D H L D L + ++ F A Sbjct: 401 PYTINEGDGAFYGPKIDFH---LKDCLGRTWQCGTIQLDFQMPINFDL-------AYVDE 450 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D + + + G++ ++ + +P +AP + ++ + + Sbjct: 451 NDERQRPIMIHRVCFGSIERFIGILT---EHFAGRFPVWLAPMQAKVLLVTKKSES---Y 504 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E+IYA L D+ E+IG A P +I+G K + D V I+ R Sbjct: 505 AEEIYAMLKDAKIRCELDNRNEKIGYMIRQAHYTERVPYMIIIGEKELEDHTVSIRTRD- 563 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G M+ EE + + N Sbjct: 564 GKTVTMTPEEFLTKITSEIKNR 585 >gi|19386908|gb|AAL87030.1|AF332624_1 threonyl-tRNA-synthetase [Azotobacter vinelandii] Length = 461 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 77/447 (17%), Positives = 148/447 (33%), Gaps = 41/447 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R Q G Sbjct: 52 YIQRIEEAEKRDHRKLGKRLDLF--HTQEEAPGMVFWHPNGWTVYQVLEQYMRAVQRENG 109 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG + +Y + M + + P + ++ +KSY Sbjct: 110 YLEIKTPQVVDRVLWEKSGHWANYAENMFT-TESESRDYAIKPMNCPCHVQVYNQGLKSY 168 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+E G+MR R F DA+ F + S ++ Sbjct: 169 RELPLRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQMQAES-AAFIKLTRQV 227 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D + + Sbjct: 228 YADFGFQDIQLKLSTRPERRVGSGE-----------------LWDRAEEALAAALESAGL 270 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ G A + Sbjct: 271 PYELQPGEGAFYGPKIEF---SLKDCLGRVWQCGTLQLDFNLPVRLG--------AEYVS 319 Query: 305 ADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + H V + +G+ ++ ++ +P +AP + ++NI + Sbjct: 320 ENNERQHPVMLHRAILGSFERFIGILIEHYE---GAFPAWLAPTQAVIMNITDK---QGE 373 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L++ G D E+IG + LL P +++G + V V ++ R Sbjct: 374 FALEVERTLNQGGFRAKCDLRNEKIGFKIREHTLLKVPYLLVIGDREVETHSVAVRTREG 433 Query: 424 GIREDMSLEEVINYASHRFSNN-RPVL 449 M +E+ + + R L Sbjct: 434 VDLGTMPVEQFREMLAQAVARRGRQEL 460 >gi|295696884|ref|YP_003590122.1| threonyl-tRNA synthetase [Bacillus tusciae DSM 2912] gi|295412486|gb|ADG06978.1| threonyl-tRNA synthetase [Bacillus tusciae DSM 2912] Length = 641 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 87/445 (19%), Positives = 156/445 (35%), Gaps = 41/445 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD L L + G+ LP G + + +RE N Sbjct: 236 EYLRRVEEARKRDHRRVGRDLELF--FFADEAPGMPFLLPKGMVIRNELERFMREFLNEY 293 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P L LW SG +D Y + M + +++ P + F+ ++S Sbjct: 294 DYEEVKTPILMDRVLWERSGHWDHYKENM-YFTEVDEREFALKPMNCPGHALTFKHRVRS 352 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + L R EL G++R REF DA+ F + + M R Sbjct: 353 YRDLPIRMAEFGLLHRHELSGALHGLLRVREFTQDDAHLFVRPDQIQDEVFACM-DLIDR 411 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G + + P S E + + Sbjct: 412 VYAAFGFPY-RVELSTRPENSTGSDE-----------------LWEAATEGLRKALESRG 453 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E A Y D H + DSL + + ++ F K+ T+ Sbjct: 454 LEYQINEGDGAFYGPKIDFH---VKDSLGRSHQCGTIQLD----FQMPEKFD----LTYV 502 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G D + H + +G+ ++ ++G +W +AP + ++ I A Sbjct: 503 GEDNERHRPVMIHRAVLGSFERFFGLLIEHYNGAFPVW---LAPVQARVLTIGAGH---L 556 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++ +R +G V D E+IG + A + P +++G + +V ++ R Sbjct: 557 PYAKEVQSRARAMGLRVEVDGRAEKIGYKVREAQVQKIPYMLVIGDQEAQTGEVSVRKRG 616 Query: 423 TGIREDMSLEEVINYASHRFSNNRP 447 G S EEV+ + P Sbjct: 617 QGDLGRRSAEEVLVAIAEEARTRTP 641 >gi|194017082|ref|ZP_03055694.1| threonyl-tRNA synthetase [Bacillus pumilus ATCC 7061] gi|194010950|gb|EDW20520.1| threonyl-tRNA synthetase [Bacillus pumilus ATCC 7061] Length = 646 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 85/433 (19%), Positives = 161/433 (37%), Gaps = 34/433 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L + +G+ WLP G + I +++ R G Sbjct: 238 LRLLEEAKERDHRKLGKELKLFAN-SQKVGQGLPLWLPKGATIRRVIERYIVDKEVRLGY 296 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L + +L+ SG + Y ++M + + +++ ++ P + I+++ SYR Sbjct: 297 EHVYTPVLANVELYKTSGHWAHYQEDMFPVMEMDNEDLVLRPMNCPHHMMIYKNEPHSYR 356 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP ++ R E+ G+ R R + DA+ F + + ++ Sbjct: 357 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTVR-LIEEVY 415 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIIS 244 GL R D +T+ + D M S D++ Sbjct: 416 QDFGLNDYTFRLS--------------YRDPEDTEKYFDDDAMWNKAQSMLKDAMDELGH 461 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ +L + + +S ++ F ++ T+ G Sbjct: 462 DYYEAEGEAAFYGPKLDV---QVKTALGKEETLSTVQVD----FLLPERFD----LTYIG 510 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DGK H + G + + + + P +AP + +I + V D Sbjct: 511 EDGKHHRPVVIHR--GVVSTMERFVAFLIEEYKGALPTWLAPVQFQVIPVSP--SVHLDY 566 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +K+ RL G V D E+IG + A + P ++VG + + V ++ Sbjct: 567 AKKVQERLQLEGLRVELDSRDEKIGYKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQ 626 Query: 425 IREDMSLEEVINY 437 E M LE + + Sbjct: 627 DSETMDLEAFVKH 639 >gi|28199783|ref|NP_780097.1| threonyl-tRNA synthetase [Xylella fastidiosa Temecula1] gi|182682533|ref|YP_001830693.1| threonyl-tRNA synthetase [Xylella fastidiosa M23] gi|32130161|sp|Q87AB2|SYT_XYLFT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238691115|sp|B2I9P8|SYT_XYLF2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|28057904|gb|AAO29746.1| threonyl-tRNA synthetase [Xylella fastidiosa Temecula1] gi|182632643|gb|ACB93419.1| threonyl-tRNA synthetase [Xylella fastidiosa M23] gi|307578811|gb|ADN62780.1| threonyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 635 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 75/438 (17%), Positives = 141/438 (32%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + RD L + + G+ W P G + IR +G Sbjct: 233 YMQRLQDAEKRDHRKIGKAQDLF--HLQEEGPGLVFWHPKGWVIWQTIENYIRRVYRNSG 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D+Y + M D + P + +F + SY Sbjct: 291 YGELRCPQILDVSLWQKSGHWDNYKENMF-FTDSEKRTYAVKPMNCPGHVQVFNQGLHSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F T + L++ Sbjct: 350 RDLPIRYGEFGACHRNEPSGALHGLLRVRGFTQDDGHIFC-TEAQIEAEVTAFHRQALQV 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++I ++ P D + Sbjct: 409 YADFGFENIQIKIALRPDKR-----------------LGDSLSWDKAEAALRAALSACEV 451 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + H L D++ ++ ++ G A + Sbjct: 452 EWQELPGEGAFYGPKIEYH---LKDAIGRTWQLGTIQVDFMMPARLG--------AEYVD 500 Query: 305 AD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + H V + +G+M ++ + IWP +AP ++ + NI + Sbjct: 501 ERSQRRHPVMLHRAIVGSMERFIGILI---EHYAGIWPTWLAPVQVVIANIT---DAQYE 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E+++ L G V D E+IG + L P ++VG + + V ++ Sbjct: 555 YAEQVHKALLNQGFRVNIDLRNEKIGYKIREHTLQRVPYLLVVGDREKENGTVAVRTCSR 614 Query: 424 GIREDMSLEEVINYASHR 441 MS+ + Sbjct: 615 EDLGAMSISTFVERLQTE 632 >gi|260596616|ref|YP_003209187.1| prolyl-tRNA synthetase [Cronobacter turicensis z3032] gi|260215793|emb|CBA28231.1| Prolyl-tRNA synthetase [Cronobacter turicensis z3032] Length = 572 Score = 253 bits (647), Expect = 4e-65, Method: Composition-based stats. Identities = 129/235 (54%), Positives = 167/235 (71%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q A+LW ESGR++ YG E+LR DR D+A + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPAELWQESGRWEQYGPELLRFVDRGDRAFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTTQESLQQTYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL P++A++G IGG SHEF VLA +GE + S DF E Sbjct: 181 YSKIFTRMGLDFRPVQADTGSIGGSASHEFQVLAQSGEDDIVFSDT-SDFAANIE 234 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 70/183 (38%), Positives = 113/183 (61%), Gaps = 3/183 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSDALKASVQGEDGRNQVLTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKV 375 YGIG RVVAA IE +HD +GI+WPD++APF+++++ + H ++ EK+YA L Sbjct: 444 YGIGVTRVVAAAIEQNHDDRGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYAELRAK 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G FA +L+G P V++G + + + ++E K+R G ++ + +++ Sbjct: 504 GIDVLMDDRKERPGVMFADMELIGIPHTVVIGDRNLDNDEIEYKYRRDGEKKMIKTGDIL 563 Query: 436 NYA 438 +Y Sbjct: 564 DYL 566 >gi|37526560|ref|NP_929904.1| threonyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii TTO1] gi|73919813|sp|Q7N3P6|SYT_PHOLL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|36785991|emb|CAE15043.1| threonyl-tRNA synthetase (threonine--tRNA ligase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 642 Score = 253 bits (647), Expect = 4e-65, Method: Composition-based stats. Identities = 70/445 (15%), Positives = 141/445 (31%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 + Y + + RD +L L + + + G+ W G + +R + Sbjct: 229 LNTYLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMAFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + +W +G +++YG+ M ++ P + IF + Sbjct: 287 EYQYQEVKGPFMMDRVMWERTGHWENYGEHMFT-TSSENREYCVKPMNCPGHIQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F + + + Sbjct: 346 KSYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQIHRE-VSSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G + I ++ + P + E A+ S + Sbjct: 405 YDVYSTFGFEKIVVKLSTRPEKRIGTEEQWNQAE-----------------ESLAAALQE 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 A Y + L D L + ++ F + S A+ Sbjct: 448 NGVQFEYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGRLS----AS 496 Query: 302 FKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G + + V + +G++ ++ + G W + + Sbjct: 497 YVGENNERKVPVMIHRAVLGSLERFIGILTEEYAGFFPTW------IAPQQVVVMNITDS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +++ +L G D E+IG + L P ++ G K V KV ++ Sbjct: 551 QADYVQELVKKLQDAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGEKEVESGKVSVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R + + I + Sbjct: 611 RRGKDLGSIDVNGFIEKLLIEIRSR 635 >gi|329893675|ref|ZP_08269809.1| Prolyl-tRNA synthetase [gamma proteobacterium IMCC3088] gi|328923602|gb|EGG30914.1| Prolyl-tRNA synthetase [gamma proteobacterium IMCC3088] Length = 571 Score = 253 bits (647), Expect = 4e-65, Method: Composition-based stats. Identities = 121/235 (51%), Positives = 159/235 (67%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ + L+E P DAE+ SH+LMLR GMI + + G+Y+W+PLG K L V I+REE Sbjct: 1 MRTSQTLISTLKETPADAEVISHRLMLRAGMIKKLASGLYTWMPLGLKVLRKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE+ +P +Q A+LW ESGR+ YG E+LR+ DR+ + GPTHEEV+TDI R+ Sbjct: 61 MDAAGAIELLMPVVQPAELWQESGRWAQYGPELLRMHDRHTREFCLGPTHEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMR+REF MKDAYSF + + +Y M + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFTMKDAYSFHIDQASLEETYWVMHRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +F RLGL P+ A++G IGG SHEF VLAD+GE + + DF E Sbjct: 181 YSNVFDRLGLMYRPVEADTGSIGGSHSHEFHVLADSGEDDIAF-SNESDFAANVE 234 Score = 169 bits (427), Expect = 9e-40, Method: Composition-based stats. Identities = 68/189 (35%), Positives = 112/189 (59%), Gaps = 3/189 (1%) Query: 257 AATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A +D+ D P+ K + RGIEVGHIF G KYS M+A A+GK + M Sbjct: 380 AHIADLREVVEGDPSPDGKGILEIKRGIEVGHIFQLGQKYSEAMNAQVLDANGKAQTLSM 439 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG R+VAA IE +HD KGIIWPD++AP++++++ + + A E +YA+L+ Sbjct: 440 GCYGIGISRIVAAAIEQNHDDKGIIWPDAMAPYQVAIVPLNMQKSEAVAQAAETLYAQLT 499 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G +V DD E+ G +FA +L+G P ++++G + +++ ++E KHR E++++ + Sbjct: 500 DAGIEVLLDDRNERPGIKFADMELIGIPHRIVIGDRSLAEGQLEYKHRAAPDSENIAVTD 559 Query: 434 VINYASHRF 442 + + Sbjct: 560 TLTVLMSKL 568 >gi|301170119|emb|CBW29723.1| threonyl-tRNA synthetase [Haemophilus influenzae 10810] Length = 643 Score = 253 bits (647), Expect = 4e-65, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 145/445 (32%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +KY + + RD L L + + + G+ W G + +R + Sbjct: 229 LAKYLTRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + LW ++G + +Y +++ ++ P + IF + Sbjct: 287 QYDYQEVKGPFMMDRVLWEKTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G +I ++ + P S E D Sbjct: 405 YDIYSTFGFTNIAVKLSTRPENRIGSDE-----------------MWDRAEAGLAAALAH 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L D L + ++ AT Sbjct: 448 NGLEYEIQEGEGAFYGPKIEF---ALRDCLGREWQCGTVQLDFALPGRLD--------AT 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ +I + G +W I++ Sbjct: 497 YVAEDNSRKTPVMIHRAILGSIERFIGIITEEYAGFFPVWLAPTQAVVINIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ +LS VG V D E++G + L P ++ G K +++ KV ++ Sbjct: 551 QADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRVPYMLVCGDKEIAEGKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R ++EE ++ + Sbjct: 611 RKGADLGTFTVEEFAEILKNQVRSR 635 >gi|116747872|ref|YP_844559.1| threonyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB] gi|116696936|gb|ABK16124.1| threonyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB] Length = 644 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 83/440 (18%), Positives = 153/440 (34%), Gaps = 41/440 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L L+E RD +L L + + G+ + P G + A + E R Sbjct: 229 KKYLHFLEEAQKRDHRRLGRELDLFS-FSDEVGAGMVIYHPRGALLRHILEAFEKREHLR 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + PTL +LW SG ++ Y + M + +++ P + I++S ++ Sbjct: 288 RGYHIVMGPTLLKTELWKRSGHFEHYRENM-YFTEIEEQSYGIKPMNCLAHMLIYKSRLR 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP ++++ R E G+ R R+F DA+ + + + Sbjct: 347 SYRDLPLRYFELGTVHRHERSGVLHGLTRVRQFTQDDAHILCTPEQLHGE-IQSIIDFVI 405 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + G M + P S E + + +D Sbjct: 406 EVMGIFGFN-HEMEISTRPAKSIGSDE-----------------DWERATSALIDALEDK 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + E A Y DV KL D+L + + + F ++ T+ Sbjct: 448 GIPYQVCEGEGAFYGPKIDV---KLRDALDRKWQCATIQCD----FTLPDRFD----LTY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DG H + +G++ V+ G W V +++ Sbjct: 497 VGVDGNRHRPVMVHRVVLGSLERFIGVLVEHFAGAFPTWLAPVQAIVVTVT------DGQ 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + +Y RL + G V DD E++G + A + P +++G + V+ V + R Sbjct: 551 IEFARNMYDRLREAGVRVELDDRNEKLGYKIREAQMQKVPYMLVIGDREVAAGGVAPRRR 610 Query: 422 LTGIREDMSLEEVINYASHR 441 E ++ E Sbjct: 611 DGTQLELIAPEAFAAMIQKE 630 >gi|219666254|ref|YP_002456689.1| threonyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2] gi|219536514|gb|ACL18253.1| threonyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2] Length = 639 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 86/447 (19%), Positives = 158/447 (35%), Gaps = 42/447 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + +H G + P G + + R+E + G Sbjct: 232 YLFKLEEAKRRDHRKLGVELDLFS--LHDEGPGFPFFHPKGMVLRNQLEDFWRQEHRKRG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + S +LW SG +D Y M +D+ P + +++ ++SY Sbjct: 290 YHEIKTPIILSRNLWENSGHWDHYKDNMYT-TKIDDEDFAVKPMNCPGGMIMYKQKLRSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R EL G++R R F DA+ F L P K + + R Sbjct: 349 RDLPLRMGELGLVHRHELSGALNGLLRVRNFTQDDAHIFML-PSQIKAEISGVIDLVDRF 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G E+ V T + + + + + Sbjct: 408 YKVFG------------------FEYHVELSTRPENSMGADETWEMATNALQEALEAKGV 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I A Y D H L D L + ++ F K+ T+ G Sbjct: 450 NYKINPGDGAFYGPKIDFH---LRDCLGRTWQCGTIQLD----FQMPEKFD----LTYIG 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ A++ + G W +AP ++ ++ I + D Sbjct: 499 EDGQKHRPVMIHRVVYGSIERFIALLTEHYAGAFPTW---LAPVQVRVLPI---SERHED 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + I RL+ + D+ E+I + A P ++VG + V ++ Sbjct: 553 YAQDIVRRLNDLDIRAEVDERREKISYKIREAQTHKIPFALVVGDQEAETDTVAVRRYGQ 612 Query: 424 GIR-EDMSLEEVINYASHRFSNNRPVL 449 E +S+ E I + + ++ Sbjct: 613 ANAGEKLSVAEFIALIQEEICSKKQLV 639 >gi|329905673|ref|ZP_08274169.1| Prolyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] gi|327547550|gb|EGF32358.1| Prolyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] Length = 578 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 122/224 (54%), Positives = 159/224 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ L+E P DAEI SH+LM+R GMI + GIY+++P+G + + V AI+REE Sbjct: 1 MRASRFFISTLKEAPADAEIVSHQLMMRAGMIKRLGSGIYTYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW E+GR+ YG E++R+ DR+ + I PT EEV+TDI R+ Sbjct: 61 MNRAGAVELLMPVVQPAELWQETGRWQEYGAELMRVKDRHGRDFIIQPTSEEVITDIART 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FY +Q KFRDE RPRFG+MR REF MKDAYSFD P G K SY MF + Sbjct: 121 EIKSYRQLPVNFYHVQTKFRDERRPRFGLMRGREFTMKDAYSFDRDPAGMKQSYQIMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y+RIF R GL P+ A++G IGG SHEF V+ADTGE + Sbjct: 181 YVRIFTRFGLGFRPVAADNGAIGGSGSHEFHVIADTGEDAIVYC 224 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 69/171 (40%), Positives = 100/171 (58%), Gaps = 3/171 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P + D+ N D+ P+ K V RGIEVGH+F GT+YS M ATF +GK + Sbjct: 386 PEPVSFDLRNVVAGDASPDGKGVLAIQRGIEVGHVFQLGTRYSEDMKATFLDENGKPQLL 445 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 QMG YGIG R++ A IE + D KGIIWP S+APF+I L + ++ + A + + A Sbjct: 446 QMGCYGIGVTRILGAAIEQNFDDKGIIWPVSIAPFEIVLCPMGYDRNEAVKTAADTLLAD 505 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 L G D DD GE+ G+ FA +L+G P ++++G + + D K+E + R Sbjct: 506 LLAAGIDAILDDRGERPGAMFADWELIGVPHRIVIGDRGLKDGKLEYQGRR 556 >gi|320109353|ref|YP_004184943.1| threonyl-tRNA synthetase [Terriglobus saanensis SP1PR4] gi|319927874|gb|ADV84949.1| threonyl-tRNA synthetase [Terriglobus saanensis SP1PR4] Length = 676 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 84/439 (19%), Positives = 151/439 (34%), Gaps = 37/439 (8%) Query: 11 LQENP-RDAEIASHKLMLRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 L+E RD + +L L + I + + G+ W P G + +R+E R G Sbjct: 267 LEEIKARDHRVLGKQLDLFS--IQELAGSGLIFWHPNGAIIRKTMEDWMRDECLRRGYDL 324 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 + P + +LW SG YG+ M + +D P + I+++ KSYR+L Sbjct: 325 VVTPHVMRRELWQISGHEGFYGQNMYAPMELDDAEYRLKPMNCPGHILIYKNSPKSYRDL 384 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P + ++ +R E G++R R F DA+ F TP + + H+ Sbjct: 385 PVRYAELGNVYRYERSGTMHGLLRVRGFTQDDAHIFC-TPAQIEDEVVACVEFAEEVLHK 443 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 G + + + + T + Sbjct: 444 FGFNEFKVELST-------------WDPNDAKHYVGDPKDWELAVNGLKTALNRKNIPYK 490 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 + A Y DV KL D L ++S + F ++ + G DG Sbjct: 491 EIPGEAAFYGPKIDV---KLVDVLGRLWQLSTVQFD----FNLPRRF----ELEYTGEDG 539 Query: 308 KDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + H + G++ V+ + +P +AP +I L+ I + E Sbjct: 540 EKHQPVMVHRALFGSVERFFGVLI---EHYAGAFPLWLAPIQIGLVPI---SEKHTAYAE 593 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + L +G V D E++ ++ L P +I+G K V ++ R G Sbjct: 594 TVKKELEAIGLRVTLDARNEKMNAKIRDLTLQKVPFVLIMGDKEAEAKAVSVRTRGKGDE 653 Query: 427 EDMSLEEVINYASHRFSNN 445 L + + A + Sbjct: 654 GSTPLADFLARAKNLLETK 672 >gi|226945724|ref|YP_002800797.1| prolyl-tRNA synthetase [Azotobacter vinelandii DJ] gi|259511575|sp|C1DRG4|SYP_AZOVD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226720651|gb|ACO79822.1| prolyl-tRNA synthetase [Azotobacter vinelandii DJ] Length = 571 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 130/282 (46%), Positives = 183/282 (64%), Gaps = 10/282 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DA + SH+LMLR GMI + + G+Y+WLPLG +AL AI+REE Sbjct: 1 MRTSQYLLSTLKETPSDAVVISHQLMLRAGMIRKLASGLYTWLPLGLRALRKAEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+E+ +P +Q A+LW ESGR++ YG E+LR+ DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MDKAGALEVLMPAIQPAELWQESGRWEQYGPELLRIRDRHAREFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFG+MR REFLMKDAYSF LT E + +Y++M + Sbjct: 121 ELNSYKQLPINFYQIQTKFRDEIRPRFGLMRGREFLMKDAYSFHLTQESLQETYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL+ P++A++G IGG SHEF VLA +GE + S D+ E + Sbjct: 181 YCNIFSRLGLEFRPVQADTGSIGGTGSHEFHVLAASGEDDIAFSDS-SDYAANIEKAEA- 238 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 + + A AA+ ++ D+ ++ V G+ Sbjct: 239 --------IPREKARAAASEELRLVDTPDARTIDELVRQFGL 272 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 69/192 (35%), Positives = 109/192 (56%), Gaps = 4/192 (2%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ + V RGIEVGHIF GTKYS M+ G +GK + Sbjct: 378 PLPQVADLRNVVEGDPSPDGQGSLVIKRGIEVGHIFQLGTKYSEAMNCKVLGENGKPVTL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE ++D +GI+WP ++APF+I+L+ +K R+A +++YA L Sbjct: 438 IMGCYGIGVSRVVAAAIEQNYDERGILWPQALAPFQIALVPMKYESAAVREATDRLYAEL 497 Query: 373 SKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 G +V DD + G +FA +L+G P +++V + +++ +E K R + + Sbjct: 498 VAAGYEVLLDDRDKKTSPGVKFADMELIGIPHRIVVSERGLAEGTLEYKGRRETEVQAIP 557 Query: 431 LEEVINYASHRF 442 ++I + +R Sbjct: 558 AADLITFLGNRI 569 >gi|315225228|ref|ZP_07867045.1| threonine--tRNA ligase [Capnocytophaga ochracea F0287] gi|314944911|gb|EFS96943.1| threonine--tRNA ligase [Capnocytophaga ochracea F0287] Length = 646 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 82/437 (18%), Positives = 152/437 (34%), Gaps = 36/437 (8%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L T ++ +G+ WLP G + + A +R+ Q + G ++ P Sbjct: 237 AKKRDHRKLGKELELFT-FSNKVGQGLPLWLPKGAALRERLEAFLRKAQKQAGYEQVVTP 295 Query: 73 TLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 + +L+V SG +D YGK+ + + + P + +I+ SH SY++LP Sbjct: 296 HIGHKNLYVTSGHWDKYGKDSFQPIATPNEGEEYLLKPMNCPHHCEIYNSHPWSYKDLPK 355 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F + +R E G+ R R F DA+ F TPE + + L +F LG Sbjct: 356 RFAEFGTVYRYEQSGELHGLTRVRCFTQDDAHIFC-TPEQLDDEFKHVIDLVLYVFGSLG 414 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + T+ S + + + I Sbjct: 415 FDNFTAQVSLRD-------------PENPTKYIGSDENWAKAENAIINAAKEKGLSYVIE 461 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D + D+L + ++ ++ +KGAD + Sbjct: 462 TGEAAFYGPKLDFM---VKDALGRSWQLGTIQVDYNLP--------ERFDLWYKGADNEM 510 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 H + G+M A++ G +W S + + + + +K+ Sbjct: 511 HRPVMIHRAPFGSMERFVAILLEHTAGNFPLW------LNPSQAIVLSLSEKYENYAQKV 564 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 L D+ E +G + A+ P +IVG + V ++ R Sbjct: 565 LRLLENSDIRTLIDNRAETMGKKIREAETKKIPYMLIVGENEEKEGTVSVRKRGGEDLGS 624 Query: 429 MSLEEVINYASHRFSNN 445 MS+E + + + Sbjct: 625 MSVEAFAKLINDEINKS 641 >gi|293364941|ref|ZP_06611658.1| threonine--tRNA ligase [Streptococcus oralis ATCC 35037] gi|307703194|ref|ZP_07640140.1| threonyl-tRNA synthetase [Streptococcus oralis ATCC 35037] gi|291316391|gb|EFE56827.1| threonine--tRNA ligase [Streptococcus oralis ATCC 35037] gi|307623269|gb|EFO02260.1| threonyl-tRNA synthetase [Streptococcus oralis ATCC 35037] Length = 647 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 77/444 (17%), Positives = 157/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVDKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYEDFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QVKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + + + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +S+++ + N Sbjct: 619 GQKETQTVSVDDFVQAILADIVNK 642 >gi|89892986|ref|YP_516473.1| threonyl-tRNA synthetase [Desulfitobacterium hafniense Y51] gi|89332434|dbj|BAE82029.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 641 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 86/447 (19%), Positives = 158/447 (35%), Gaps = 42/447 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + +H G + P G + + R+E + G Sbjct: 234 YLFKLEEAKRRDHRKLGVELDLFS--LHDEGPGFPFFHPKGMVLRNQLEDFWRQEHRKRG 291 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + S +LW SG +D Y M +D+ P + +++ ++SY Sbjct: 292 YHEIKTPIILSRNLWENSGHWDHYKDNMYT-TKIDDEDFAVKPMNCPGGMIMYKQKLRSY 350 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ L R EL G++R R F DA+ F L P K + + R Sbjct: 351 RDLPLRMGELGLVHRHELSGALNGLLRVRNFTQDDAHIFML-PSQIKAEISGVIDLVDRF 409 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G E+ V T + + + + + Sbjct: 410 YKVFG------------------FEYHVELSTRPENSMGADETWEMATNALQEALEAKGV 451 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I A Y D H L D L + ++ F K+ T+ G Sbjct: 452 NYKINPGDGAFYGPKIDFH---LRDCLGRTWQCGTIQLD----FQMPEKFD----LTYIG 500 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ A++ + G W +AP ++ ++ I + D Sbjct: 501 EDGQKHRPVMIHRVVYGSIERFIALLTEHYAGAFPTW---LAPVQVRVLPI---SERHED 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + I RL+ + D+ E+I + A P ++VG + V ++ Sbjct: 555 YAQDIVRRLNDLDIRAEVDERREKISYKIREAQTHKIPFALVVGDQEAETDTVAVRRYGQ 614 Query: 424 GIR-EDMSLEEVINYASHRFSNNRPVL 449 E +S+ E I + + ++ Sbjct: 615 ANAGEKLSVAEFIALIQEEICSKKQLV 641 >gi|326803832|ref|YP_004321650.1| threonine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a] gi|326651446|gb|AEA01629.1| threonine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a] Length = 651 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 81/440 (18%), Positives = 156/440 (35%), Gaps = 33/440 (7%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + RD +L L MI + +G+ WLP G V I +++ + G Sbjct: 238 RREEAKERDHRKIGKELDLF--MIDPKTGQGLPFWLPNGATIRRQVERYIVDKEVQAGYQ 295 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHIKSYR 126 + P + DL+ SG +D Y +M D D + P + ++++ + SYR Sbjct: 296 HVYTPIMADVDLYKTSGHWDHYSDDMFPTMDFEDGESFVLRPMNCPHHIRVYQNKVHSYR 355 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP ++ + R E G+ R RE + D++ F + F S LR Sbjct: 356 ELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDSHIFVRLDQIKDE-----FKSILRFM 410 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 D + + F + + D++ Sbjct: 411 QDAYHDFNIT---------DYRYRLSYRDPKDTKKYFDDDEMWEKAQSMLKEAMDELGLD 461 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y DV ++ +L + +S ++ F K+ T+ G Sbjct: 462 YFEAEGEAAFYGPKLDV---QVKTALGNEETLSTIQLD----FLLPEKFD----VTYVGE 510 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DG++ + + + G + + + + +P +AP + LI + + D Sbjct: 511 DGQNTHRPVMIHR-GIVSTMERFVAYLIEEYKGAFPTWLAPQQAILIPVNEN--QHADYV 567 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 ++ R+ G + DD E++G + A P Q++ G + + V ++ + Sbjct: 568 YQVANRMRSEGLRIEVDDRNEKMGYKIREAQTRKVPYQLVFGDNEIENGTVTVRRYGSKK 627 Query: 426 REDMSLEEVINYASHRFSNN 445 E + L+E IN + Sbjct: 628 TETVDLDEFINMIHAEIDSY 647 >gi|156935287|ref|YP_001439203.1| prolyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894] gi|166980122|sp|A7MI22|SYP_ENTS8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|156533541|gb|ABU78367.1| hypothetical protein ESA_03144 [Cronobacter sakazakii ATCC BAA-894] Length = 572 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 129/235 (54%), Positives = 167/235 (71%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q A+LW ESGR++ YG E+LR DR D+A + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPAELWQESGRWEQYGPELLRFVDRGDRAFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTTQESLQQTYDAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL P++A++G IGG SHEF VLA +GE + S DF E Sbjct: 181 YSKIFTRMGLDFRPVQADTGSIGGSASHEFQVLAQSGEDDIVFSDT-SDFAANIE 234 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 70/183 (38%), Positives = 113/183 (61%), Gaps = 3/183 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSDALKASVQGEDGRNQVLTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKV 375 YGIG RVVAA IE +HD +GI+WPD++APF+++++ + H ++ EK+YA L Sbjct: 444 YGIGVTRVVAAAIEQNHDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYAELRAK 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G FA +L+G P V++G + + + ++E K+R G ++ + +++ Sbjct: 504 GIDVLMDDRKERPGVMFADMELIGIPHTVVIGDRNLDNDEIEYKYRRDGEKKMIKTGDIL 563 Query: 436 NYA 438 +Y Sbjct: 564 DYL 566 >gi|160875442|ref|YP_001554758.1| threonyl-tRNA synthetase [Shewanella baltica OS195] gi|189083621|sp|A9L2Q9|SYT_SHEB9 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|160860964|gb|ABX49498.1| threonyl-tRNA synthetase [Shewanella baltica OS195] gi|315267632|gb|ADT94485.1| threonyl-tRNA synthetase [Shewanella baltica OS678] Length = 642 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 74/443 (16%), Positives = 143/443 (32%), Gaps = 40/443 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S + + + RD +L L + + + G+ W G + IR + N Sbjct: 229 LSTHLTRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWSIFLELERFIRRKLN 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + LW SG +D Y + M ++ P + IF + Sbjct: 287 QYTYQEVKGPLMMDRVLWERSGHWDKYSEAMFT-TSSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F + + + Sbjct: 346 KSYRDLPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTDSQVQEE-VSACIQMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + G ++I ++ + P D + D Sbjct: 405 YDTYATFGFENIVVKLSTRPEKR-----------------IGDDAMWDRAEEALKQALRD 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 +I+ A Y + L D L + ++ G AT Sbjct: 448 NNIEFTILPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDYALPSRLG--------AT 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ ++ + G+ W + +++ Sbjct: 497 YVAEDNSRQTPVMIHRAILGSLERFLGILIEEYAGRFPTWLAPMQVVVMNIT------DK 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D E++ + G +D E+IG + L P ++VG + + + +V ++ Sbjct: 551 QADYVEEVVKFFKEQGIRASFDLRNEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R M LE+ + S Sbjct: 611 RDGIDLGKMRLEDFATKIHQQIS 633 >gi|126174365|ref|YP_001050514.1| threonyl-tRNA synthetase [Shewanella baltica OS155] gi|153000743|ref|YP_001366424.1| threonyl-tRNA synthetase [Shewanella baltica OS185] gi|217973356|ref|YP_002358107.1| threonyl-tRNA synthetase [Shewanella baltica OS223] gi|166225497|sp|A3D4I2|SYT_SHEB5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166225498|sp|A6WNH2|SYT_SHEB8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783536|sp|B8EES6|SYT_SHEB2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|125997570|gb|ABN61645.1| threonyl-tRNA synthetase [Shewanella baltica OS155] gi|151365361|gb|ABS08361.1| threonyl-tRNA synthetase [Shewanella baltica OS185] gi|217498491|gb|ACK46684.1| threonyl-tRNA synthetase [Shewanella baltica OS223] Length = 642 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 74/443 (16%), Positives = 143/443 (32%), Gaps = 40/443 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S + + + RD +L L + + + G+ W G + IR + N Sbjct: 229 LSTHLTRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWSIFLELERFIRRKLN 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + LW SG +D Y + M ++ P + IF + Sbjct: 287 QYTYQEVKGPLMMDRVLWERSGHWDKYSEAMFT-TSSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F + + + Sbjct: 346 KSYRDLPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTDSQVQEE-VSACIQMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + G ++I ++ + P D + D Sbjct: 405 YDTYATFGFENIVVKLSTRPEKR-----------------IGDDAMWDRAEEALKQALRD 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 +I+ A Y + L D L + ++ G AT Sbjct: 448 NNIEFTILPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDYALPSRLG--------AT 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ ++ + G+ W + +++ Sbjct: 497 YVAEDNSRQTPVMIHRAILGSLERFLGILIEEYAGRFPTWLAPMQVVVMNIT------DK 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D E++ + G +D E+IG + L P ++VG + + + +V ++ Sbjct: 551 QADYVEEVVKFFKEQGIRASFDLRNEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R M LE+ + S Sbjct: 611 RDGIDLGKMRLEDFATKIHQQIS 633 >gi|154249412|ref|YP_001410237.1| threonyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1] gi|154153348|gb|ABS60580.1| threonyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1] Length = 638 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 76/443 (17%), Positives = 147/443 (33%), Gaps = 43/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +L +L+E RD +L L I+ + G+ +LP G L + ++ RE + Sbjct: 232 YLKMLEEARKRDHRRLGPQLELF--FINTDVAAGMPIFLPYGMTVLKELMSLSRELHKKY 289 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + LW +SG +D Y M ++ + P + I+++ S Sbjct: 290 GYKEVGTPLIMHEKLWRQSGHWDHYKNNM-YFTEKEEVTYAVKPMNCPGHILIYKNKPVS 348 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 Y++LP ++ R E G++R R F DA+ F + Sbjct: 349 YKDLPIRLFEFGRVHRYERGGVLHGLLRVRTFTQDDAHIFCREDQIVDEVT----NVVRF 404 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I G+ RA + D + + +++ Sbjct: 405 INELYGIFGFSYRATLSTMPEDHM---------------GDEATWEKATEGLRNALEEMK 449 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D L + + ++ F ++ T+K Sbjct: 450 VPYEVAEGEGAFYGPKIDFH---VRDVLGREWQCATIQMD----FQMPERFD----LTYK 498 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 +DG + + G++ ++ + G W V I + + Sbjct: 499 DSDGNERRPVMIHRALYGSIERFFGILIEHYAGAFPTWLAPVQAVVIPV------SEKFS 552 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + + IY L + V DD E + + + P +IVG K + ++ R Sbjct: 553 EYAKNIYQTLDENDIRVELDDRNETLSYRIRENQMRKVPYMIIVGEKEKESETISVRTRE 612 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + + + I + Sbjct: 613 GKDTHGIKINDFIETVLNEIRKR 635 >gi|225864350|ref|YP_002749728.1| threonyl-tRNA synthetase [Bacillus cereus 03BB102] gi|225785860|gb|ACO26077.1| threonine--tRNA ligase [Bacillus cereus 03BB102] Length = 639 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 155/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ ++L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGNELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TPE + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + S + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEASLENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + I + V Sbjct: 501 DEKNEKRRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHV 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++ +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYADEVADKLAQAGVRVERDMRDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 + + L+ + N + Sbjct: 616 EEKSDVIELDMFVESIKVEIKNRK 639 >gi|294501489|ref|YP_003565189.1| threonyl-tRNA synthetase [Bacillus megaterium QM B1551] gi|294351426|gb|ADE71755.1| threonyl-tRNA synthetase [Bacillus megaterium QM B1551] Length = 645 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 78/438 (17%), Positives = 155/438 (35%), Gaps = 36/438 (8%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L T + +G+ WLP G + I +++ G Sbjct: 237 LRLLEEAKERDHRKLGKELNLFTN-SQKVGQGLPLWLPKGATIRRIIERYIVDKEVSLGY 295 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG ++ Y +M + +++ ++ P + +++ I SYR Sbjct: 296 QHVYTPVLGSVELYKTSGHWEHYQDDMFPAMEMDNEDLVLRPMNCPHHMMVYKQGIHSYR 355 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K + ++ ++ Sbjct: 356 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEEFIRVVRLVEAVYK 415 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIISL 245 G ++ R D +T+ + D M S D++ Sbjct: 416 DFGFENYSFRLS--------------YRDPADTEKYFDDDAMWEKAQSMLKDAMDELDLD 461 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y DV ++ +L + + +S ++ F ++ T+ G Sbjct: 462 YYEAEGEAAFYGPKLDV---QVKTALGKEETLSTVQLD----FLLPERFD----LTYIGE 510 Query: 306 DGKDHYVQMGSYGIG--AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DGK H + G+ R VA +IE + + Sbjct: 511 DGKQHRPVVIHRGVVSTMERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPTV------HLE 564 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L G V D E+IG + A + P ++VG K V D V ++ Sbjct: 565 YAKEVQEQLQLAGIRVELDSRDEKIGYKIREAQMQKIPYMLVVGDKEVEDKAVNVRKYGE 624 Query: 424 GIREDMSLEEVINYASHR 441 E + + + Sbjct: 625 QNSETVGFQAFLQNVKAE 642 >gi|323351205|ref|ZP_08086861.1| threonine--tRNA ligase [Streptococcus sanguinis VMC66] gi|322122429|gb|EFX94140.1| threonine--tRNA ligase [Streptococcus sanguinis VMC66] Length = 647 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 151/445 (33%), Gaps = 32/445 (7%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 KY + RD +L L MI + +G+ WLP G + I +++ Sbjct: 228 LKKYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATVRRELERYIVDKE 285 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRS 120 +G + P L S L+ SG ++ Y ++M D D + + P + +++ Sbjct: 286 LASGYQHVYTPPLASVGLYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKH 345 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SYR LP +I + R E ++ + + +TPE + + + Sbjct: 346 HVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQL 405 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + ++ L R + D E + D Sbjct: 406 IIDVYADFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALD 452 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 453 EMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD----L 501 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + GADG++H M G+ + I + + + I ++ Sbjct: 502 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEA 557 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ +L G D+ E++ + + P Q+IVG K V D V ++ Sbjct: 558 HIDYAWQVAKKLRDKGVRADVDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVRR 617 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 + ++E + ++ Sbjct: 618 YGQKETHTIPVDEFVEQILADIASK 642 >gi|229178727|ref|ZP_04306091.1| Threonyl-tRNA synthetase [Bacillus cereus 172560W] gi|228604885|gb|EEK62342.1| Threonyl-tRNA synthetase [Bacillus cereus 172560W] Length = 640 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 72/444 (16%), Positives = 154/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 KYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TP+ + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPKQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + + +G++ A++ G W + + I + V Sbjct: 501 DENNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHV 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++ +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYADEVADKLAQAGVRVERDVRDEKLGYKIREAQMQKVPYILVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E ++L N + Sbjct: 616 EEKSEVVTLNVFAASIEEEIKNRK 639 >gi|152984493|ref|YP_001349901.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa PA7] gi|166980141|sp|A6VA16|SYP_PSEA7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|150959651|gb|ABR81676.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa PA7] Length = 571 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 126/269 (46%), Positives = 177/269 (65%), Gaps = 10/269 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DA + SH+L+LR GMI + + G+Y+WLP+G + L V ++REE Sbjct: 1 MRTSQYLLSTLKETPADAVVISHQLLLRAGMIRRLASGLYTWLPMGLRVLRKVETVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q A+LW ESGR++ YG E+LRL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPAVQPAELWQESGRWEQYGPELLRLKDRHEREFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFG+MR REF+MKDAYSF L E + +Y+ M+ + Sbjct: 121 ELNSYKQLPINFYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHLNQESLQATYDGMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF RLGL P++A++G IGG SHEF VLA++GE + S D+ E + Sbjct: 181 YSKIFTRLGLDFRPVQADNGSIGGSGSHEFHVLANSGEDDIVFSDS-SDYAANIEKAEA- 238 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFD 269 V + +A AA+ D+ D Sbjct: 239 --------VPRESARGAASEDMRLVDTPD 259 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 71/193 (36%), Positives = 112/193 (58%), Gaps = 4/193 (2%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K V RGIEVGHIF GTKYS M + GK + Sbjct: 378 PLPEVADLRNVVEGDPSPDGKGTLVIKRGIEVGHIFQLGTKYSEAMKLSVLSEQGKPVNL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE +HD +GI+WP ++APF+I+L+ +K + R A +++YA L Sbjct: 438 IMGCYGIGVSRVVAAAIEQNHDERGILWPSALAPFQIALVPLKYETESVRQATDRLYAEL 497 Query: 373 SKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + G +V DD + G +FA +LLG P +++V + +++ +E K R +++ Sbjct: 498 TAAGFEVLLDDRDKKTSPGVKFADMELLGIPHRIVVSDRGLNEGVLEYKGRRDSESQNLP 557 Query: 431 LEEVINYASHRFS 443 + E++++ + + S Sbjct: 558 IGELMSFITEKLS 570 >gi|125718378|ref|YP_001035511.1| threonyl-tRNA synthetase [Streptococcus sanguinis SK36] gi|166225508|sp|A3CP56|SYT_STRSV RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|125498295|gb|ABN44961.1| Threonyl-tRNA synthetase, putative [Streptococcus sanguinis SK36] Length = 647 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 153/445 (34%), Gaps = 32/445 (7%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 KY + RD +L L MI + +G+ WLP G + I +++ Sbjct: 228 LKKYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATVRRELERYIVDKE 285 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRS 120 +G + P L S +L+ SG ++ Y ++M D D + + P + +++ Sbjct: 286 LASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKH 345 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SYR LP +I + R E ++ + + +TPE + + + Sbjct: 346 HVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQL 405 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + ++ L R + D E + D Sbjct: 406 IIDVYADFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALD 452 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 453 EMGVDFFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD----L 501 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + GADG++H M G+ + I + + + I ++ Sbjct: 502 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEA 557 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ +L G D+ E++ + + P Q+IVG K V D V ++ Sbjct: 558 HIDYAWQVAKKLRDKGVRADVDERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVRR 617 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 ++++E + ++ Sbjct: 618 YGQKETHTVAVDEFVEQILADIASK 642 >gi|308233449|ref|ZP_07664186.1| threonyl-tRNA synthetase [Atopobium vaginae DSM 15829] gi|328944509|ref|ZP_08241970.1| threonine--tRNA ligase [Atopobium vaginae DSM 15829] gi|327490910|gb|EGF22688.1| threonine--tRNA ligase [Atopobium vaginae DSM 15829] Length = 592 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 77/438 (17%), Positives = 154/438 (35%), Gaps = 43/438 (9%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD ++ L M+++ G WLP G + + + +E Q + G ++ Sbjct: 190 EAEKRDHRKIGREMDLF--MVNEAGPGFPFWLPNGMRIRNALMNYWQEMQEKFGYEQIQT 247 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + S LW SG +D Y + M +++ P + ++ + +SYR+LP Sbjct: 248 PVILSRKLWETSGHWDHYKENMYT-TKIDEEDFAIKPMNCPGACLVYMNKPRSYRDLPLK 306 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + L R EL+ G+ R REF DA+ F + + +++ Sbjct: 307 LAEAGLDHRHELKGTLHGLFRVREFTQDDAHLFIRPDQICDEVAEVT--HLITAYYKQFG 364 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + + P S E A+ G + + +I E Sbjct: 365 FPYKVELSTRPENSMGSDEDWKTAEDG-----------------LRNALETMGLEYTINE 407 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D H L D L + ++ F + + DG+ Sbjct: 408 GDGAFYGPKIDFH---LKDCLGRTWQCGTIQLDFQFPHNF--------NLEYVDKDGQKK 456 Query: 311 YV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + G G+ ++ ++GK +W + + + + R ++ Sbjct: 457 RPIMIHRAGFGSFERFIGMLIEQYEGKFPVWLAPLQVKVLPV------SEKTRAYARELT 510 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLL-GFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L + V DD E+IG + A + P +IVG + + ++ R T + Sbjct: 511 QKLRDLKIRVKLDDRDEKIGYKIREARSIDRVPYMLIVGEQEAQAGNISVRDR-TNTTKQ 569 Query: 429 MSLEEVINYASHRFSNNR 446 + ++ + + S+ + Sbjct: 570 YAFDDFVALLQAQISSRQ 587 >gi|166711588|ref|ZP_02242795.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 634 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 74/438 (16%), Positives = 138/438 (31%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + + RD L + + + G+ W P G V +R+ +G Sbjct: 232 YILRMEEADKRDHRRIGKAQDLF--HLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D+Y M + + P + +F + SY Sbjct: 290 YGEVRCPQILDVSLWQKSGHWDNYQDAMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F L + L + Sbjct: 349 RDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCL-ESQIESEVTAFHQQALAV 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P D + + Sbjct: 408 YTAFGFDDIQIKIALRPEKR-----------------LGDDATWDKAEAALRSALGVCGV 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + H L D++ ++ ++ G A + Sbjct: 451 EWQELPGEGAFYGPKIEYH---LKDAIGRTWQLGTMQVDFMMPGRLG--------AEYVD 499 Query: 305 AD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + K H V + +G+M ++ H G W V ++ D Sbjct: 500 ENSQKKHPVMLHRAIVGSMERFIGILIEHHAGAFPSWLAPVQVVVANIT------DAQAD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L+ G V D E+IG + L P ++VG + + V ++ R Sbjct: 554 YVDAVRKTLANQGFRVSADLRNEKIGYKIREHMLQRVPYLLVVGDREKENGAVAVRTRSG 613 Query: 424 GIREDMSLEEVINYASHR 441 M++ I Sbjct: 614 EDLGTMTVSAFIERLQAE 631 >gi|256823089|ref|YP_003147052.1| prolyl-tRNA synthetase [Kangiella koreensis DSM 16069] gi|256796628|gb|ACV27284.1| prolyl-tRNA synthetase [Kangiella koreensis DSM 16069] Length = 571 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 123/238 (51%), Positives = 163/238 (68%), Gaps = 1/238 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E+P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V AI+REE Sbjct: 1 MRSSQYLLSTQREDPSDAELISHKLMLRAGMIRKIASGMYTWLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIEM +P++Q ++LW ESGR+D +G E+LR DR+ + GPTHEE++T + R Sbjct: 61 MNKAGAIEMLMPSVQPSELWEESGRWDQFGPELLRFKDRHGRDFCLGPTHEEIITAVIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP +FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF + E +Y M + Sbjct: 121 EINSYKQLPASFYQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHVDEESLSETYQVMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 Y IF R+GL P+ A++G IGG SHEF VLA++GE + S + D+ E Sbjct: 181 YCNIFERIGLDYRPVLADTGAIGGSNSHEFHVLAESGEDAIAFSSEG-DYAANIEKAQ 237 Score = 175 bits (443), Expect = 2e-41, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 110/196 (56%), Gaps = 3/196 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 Q A + D+ N D P+ K + RGIEVGHIF G KYS M+ +GK Sbjct: 375 QRDAQISEVMDIRNVVAGDPSPDGKGILEIKRGIEVGHIFQLGNKYSEAMNCKVLDQNGK 434 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEK 367 + MG YG+G R+VAA IE ++D GIIWP ++APF++++I + H + + +K Sbjct: 435 AVTLAMGCYGVGVSRIVAAAIEQNYDNNGIIWPQAIAPFQVAIIPMNMHRSEQVQQIADK 494 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +Y L + G DV +DD E+ G F+ +L+G P +++V + + + +E K+R ++ Sbjct: 495 LYQDLQQQGIDVIFDDRKERPGVMFSDMELIGVPHRLVVSERGLENGTIEYKNRQNTAKD 554 Query: 428 DMSLEEVINYASHRFS 443 D+S+E V++Y Sbjct: 555 DVSVENVVDYIKGLLQ 570 >gi|319897020|ref|YP_004135215.1| threonyl-tRNA synthetase [Haemophilus influenzae F3031] gi|317432524|emb|CBY80883.1| threonyl-tRNA synthetase [Haemophilus influenzae F3031] Length = 643 Score = 253 bits (646), Expect = 5e-65, Method: Composition-based stats. Identities = 76/445 (17%), Positives = 144/445 (32%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LAEYLTRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + LW ++G + +Y +++ ++ P + IF + Sbjct: 287 QYDYQEVKGPFMMDRVLWEKTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G +I ++ + P S E D Sbjct: 405 YDIYSTFGFTNIAVKLSTRPENRIGSDE-----------------MWDRAEGGLAAALAH 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L D L + ++ AT Sbjct: 448 NGLEYEIQEGEGAFYGPKIEF---ALRDCLGREWQCGTVQLDFALPGRLD--------AT 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ +I + G W +++ Sbjct: 497 YVAEDNNRKTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPTQAVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ +LS VG V D E++G + L P ++ G K +++ KV ++ Sbjct: 551 QADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRVPYMLVCGDKEIAEGKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R ++EE ++ N Sbjct: 611 RKGADLGTFTVEEFAEILKNQVRNR 635 >gi|222100818|ref|YP_002535386.1| Threonyl-tRNA synthetase [Thermotoga neapolitana DSM 4359] gi|254783544|sp|B9KAN7|SYT_THENN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|221573208|gb|ACM24020.1| Threonyl-tRNA synthetase [Thermotoga neapolitana DSM 4359] Length = 640 Score = 253 bits (646), Expect = 5e-65, Method: Composition-based stats. Identities = 87/443 (19%), Positives = 164/443 (37%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E RD +L L + ++ G+ +LP G L+ + RE G Sbjct: 229 YLKFLEEAQKRDHRKLGPQLELFM-LNTDYAPGMPFFLPRGVIVLNELMNFSRELHRERG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW SG +D Y + M ++ ++ P + +++S SY Sbjct: 288 YQEIFTPLIMNEQLWRISGHWDHYAENM-YFIEKGEERYAVKPMNCPGHILVYKSRAVSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F++ R E G+MR R F DA+ F TP+ + + I Sbjct: 347 RDLPLRFFEFGRVHRYERSGVLHGLMRVRSFTQDDAHIFC-TPDQIEDEILGVLELINTI 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G V T + + + D Sbjct: 406 YSQFGFTYR------------------VELSTMPEDHMGDEAIWEKATNALKKALDRAGL 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H + DSL + + ++ + T+ G Sbjct: 448 PYRVNEGEGAFYGPKIDFH---IKDSLGREWQCATIQLDF--------MMPEKFNVTYIG 496 Query: 305 ADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D ++H V + G++ ++ G W +AP ++++I I + Sbjct: 497 PDNREHTAVMIHRAIYGSLERFFGILIEHFAGAFPTW---IAPVQVAVIPISDKHS---E 550 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +K+ LS+ G VF DD E +G + A + P V++G + + K+ ++ R Sbjct: 551 GAKKVATMLSREGFRVFLDDRRETLGYRIRQAQIQKIPYMVVLGDRELESGKLSVRTRSG 610 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 +D+ ++ I+ + + Sbjct: 611 KEIKDVEMDHFIDTLKKEVRDRK 633 >gi|304408774|ref|ZP_07390395.1| threonyl-tRNA synthetase [Shewanella baltica OS183] gi|307302777|ref|ZP_07582532.1| threonyl-tRNA synthetase [Shewanella baltica BA175] gi|304352595|gb|EFM16992.1| threonyl-tRNA synthetase [Shewanella baltica OS183] gi|306913137|gb|EFN43559.1| threonyl-tRNA synthetase [Shewanella baltica BA175] Length = 642 Score = 253 bits (646), Expect = 5e-65, Method: Composition-based stats. Identities = 74/443 (16%), Positives = 143/443 (32%), Gaps = 40/443 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S + + + RD +L L + + + G+ W G + IR + N Sbjct: 229 LSTHLTRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWSIFLELERFIRRKLN 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + LW SG +D Y + M ++ P + IF + Sbjct: 287 QYTYQEVKGPLMMDRVLWERSGHWDKYSEAMFT-TSSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F + + + Sbjct: 346 KSYRDLPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTDSQVQEE-VSACIQMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + G ++I ++ + P D + D Sbjct: 405 YDTYATFGFENIVVKLSTRPEKR-----------------IGDDAMWDRAEEALKQALRD 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 +I+ A Y + L D L + ++ G AT Sbjct: 448 NNIEFTILPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDYALPSRLG--------AT 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ ++ + G+ W + +++ Sbjct: 497 YVAEDNSRQTPVMIHRAILGSLERFLGILIEEYAGRFPTWLAPMQVVVMNIT------DK 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D E++ + G +D E+IG + L P ++VG + + + +V ++ Sbjct: 551 QADYVEEVVKFFKEQGIRASFDLRNEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R M LE+ + S Sbjct: 611 RDGIDLGKMRLEDFATKIHQQIS 633 >gi|329733112|gb|EGG69449.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193] Length = 644 Score = 253 bits (646), Expect = 5e-65, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 161/445 (36%), Gaps = 33/445 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD +L L T G+ WLP G + I +++ Sbjct: 229 KAHLQMLEERKERDHRKIGKELELFTN-SQLVGAGLPLWLPNGATIRREIERYIVDKEVS 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHI 122 G + P L + DL+ SG +D Y ++M ++ M+ P + I+ + Sbjct: 288 MGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPMNCPHHMMIYANKP 347 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ R E ++ + + + P+ K + ++ + Sbjct: 348 HSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMII 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDD 241 ++ G + R D + + + D + D+ Sbjct: 408 DVYKDFGFEDYSFRLS--------------YRDPEDKEKYFDDDDMWNKAENMLKEAADE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y DV ++ ++ + + +S ++ F ++ T Sbjct: 454 LGLSYEEAIGEAAFYGPKLDV---QVKTAMGKEETLSTAQLD----FLLPERFD----LT 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + G DG+ H + G + + + + +P +AP ++ +I + + Sbjct: 503 YIGQDGEHHRPVVIHR--GVVSTMERFVAFLTEETKGAFPTWLAPKQVQIIPVNV--DLH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ L G V DD E++G + A + P Q++VG K V +++V ++ Sbjct: 559 YDYARQLQDELKSQGVRVSIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRQY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + +E + +E I + Sbjct: 619 GSQDQETVEKDEFIWNLVDEIRLKK 643 >gi|229017690|ref|ZP_04174581.1| Threonyl-tRNA synthetase [Bacillus cereus AH1273] gi|228743616|gb|EEL93725.1| Threonyl-tRNA synthetase [Bacillus cereus AH1273] Length = 639 Score = 253 bits (646), Expect = 5e-65, Method: Composition-based stats. Identities = 71/444 (15%), Positives = 154/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + +LW +SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQELWEKSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TPE + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G + + + P + + + Sbjct: 410 VYKTFGFQYE-VELSTRPEDS-----------------MGDDKLWEQAEAALANVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G +W + + I + V Sbjct: 501 DEKNEKRRPVVIHRAVLGSLDRFLAILIEHFGGAFPVWVA-----PVQVKVIPVSNAVHV 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 ++ +L++ G V D E++G + A + P +++G K + V ++ Sbjct: 556 QYANEVAHKLAQAGIRVEEDIRDEKLGYKIREAQMQKVPYVLVIGDKEMESEAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 + + L+ + N + Sbjct: 616 EEESKIVELDAFVESMKEEMKNRK 639 >gi|254362299|ref|ZP_04978411.1| threonine--tRNA ligase [Mannheimia haemolytica PHL213] gi|153093879|gb|EDN74807.1| threonine--tRNA ligase [Mannheimia haemolytica PHL213] Length = 643 Score = 253 bits (646), Expect = 5e-65, Method: Composition-based stats. Identities = 69/444 (15%), Positives = 144/444 (32%), Gaps = 38/444 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LAEYLQRLEEAAKRDHRRIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + LW ++G + +Y +++ ++ P + IF + Sbjct: 287 EYDYQEVKGPFMMDRVLWEKTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F + + + + Y Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIESEVISCIKMVY 405 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 G +I ++ + P D + Sbjct: 406 DIYST-FGFTNIAVKLSTRPENR-----------------IGDDAMWDRAEKGLANALRN 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L D L + ++ F + + A Sbjct: 448 NGLEYEIQEGEGAFYGPKIEF---ALRDCLGREWQCGTVQLD----FALPGRLAASYVAE 500 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 +G+ V + +G++ +I + G W +++ Sbjct: 501 ---DNGRRTPVMIHRAILGSIERFIGIITEEYAGFFPTWLAPTQAVVMNIT------DSQ 551 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D +++ +LS G V D E++G + L P ++ G K +++ KV ++ R Sbjct: 552 ADYVQQVVKQLSDAGIRVKADLRNEKVGFKVREHTLRRVPYMLVCGDKEIAEGKVSVRTR 611 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +++ ++ Sbjct: 612 KGADLGTYLVSDLVEILKNQIKAR 635 >gi|149371736|ref|ZP_01891152.1| threonine--tRNA ligase (threonine tRNA synthetase) [unidentified eubacterium SCB49] gi|149355363|gb|EDM43923.1| threonine--tRNA ligase (threonine tRNA synthetase) [unidentified eubacterium SCB49] Length = 647 Score = 253 bits (645), Expect = 5e-65, Method: Composition-based stats. Identities = 75/446 (16%), Positives = 158/446 (35%), Gaps = 36/446 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y + + RD +L L T + +G+ WLP G + + +++ Q Sbjct: 228 LKEYLALLEEAKKRDHRKLGKELELFT-FSQKVGQGLPLWLPKGAALRERLENFLKKAQK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRS 120 + G + P + + +L+V SG + YG++ + + + + P + +I+ + Sbjct: 287 KAGYEMVVTPHIGNKELYVTSGHFAKYGEDSFQVINTPNDGEEFMLKPMNCPHHCEIYNA 346 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 SY++LP + +R E G+ R R F DA+ F TP+ + K+ Sbjct: 347 KPMSYKDLPKRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFC-TPDQLDEEFKKVID 405 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L +F LG + + + + + + + Sbjct: 406 LVLYVFGSLGFEKFTTQVSIRDM-------------SKPEKYIGDVSTWEKAENAILNAV 452 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D + E A Y D + D+L + ++ ++ Sbjct: 453 KDKGLDYIVEEGEAAFYGPKLDFM---VKDALGRSWQLGTIQVDYNLP--------ERFE 501 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 T+KG+D + H + G++ A++ G +W + I + Sbjct: 502 LTYKGSDNELHRPVMIHRAPFGSLERFVAILLEHTGGNFPLW------LMPEQVAILSLS 555 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + + EK+ L D+ E IG + A++ P +I+G + +D + + Sbjct: 556 EKYEEYAEKVLNLLENHDIRALVDNRNETIGKKIREAEMNKIPYMLILGEQEENDGTISV 615 Query: 419 KHRLTGIREDMSLEEVINYASHRFSN 444 + G M++E N + + Sbjct: 616 RKHSEGDLGTMTVEAFGNMITEAIAK 641 >gi|325279133|ref|YP_004251675.1| threonyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712] gi|324310942|gb|ADY31495.1| threonyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712] Length = 650 Score = 253 bits (645), Expect = 5e-65, Method: Composition-based stats. Identities = 84/449 (18%), Positives = 165/449 (36%), Gaps = 36/449 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 ++ + + + RD ++ L T G+ WLP G D + +R+ Q + Sbjct: 231 EWLVLMEEAKQRDHRKIGKEMELFT-FSQAVGAGLPMWLPKGAMLRDRLEGFLRKVQKKY 289 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHI 122 G ++ P + + +L+ SG Y YGK+ + + + + P + +I++ Sbjct: 290 GYQQVITPHIGNVNLYKTSGHYQKYGKDSFQVITTPQEGEEFMLKPMNCPHHCEIYKFKP 349 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP F + +R E G+ R R F DA+ F TP+ K + K+ Sbjct: 350 RSYKDLPLRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFC-TPDQLKEEFKKVIDII 408 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 IF L K + D T+ + D + + Sbjct: 409 FTIFKALDFKDFTAQVSLR--------------DPKNTEKYIGTDENWEKAERAIIEAAE 454 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + VE A Y D + D++ ++ ++ F +Y+ + Sbjct: 455 EKGLKTTVELGEAAFYGPKLDFM---VKDAIGRKWQLGTIQVDYNLPERFDLEYTGADNL 511 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 V + G+M AV+ GK +W + + + Sbjct: 512 K-------HRPVMIHRAPFGSMERFVAVLIEHTGGKFPLWLAPDQVVVMPI------SEK 558 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ L+ DD E+IG + +L P +IVG ++++ V ++ Sbjct: 559 FNDYAQKLSDLLNNSDIRTVLDDRNEKIGRKIRDNELKKIPYLLIVGENEMNNNTVSVRR 618 Query: 421 RLTGIREDMSLEEVINYASHRFSNNRPVL 449 + G MS+E+ I+ + ++ + Sbjct: 619 QGQGDMGTMSVEDFISKINEEVNSQLQTI 647 >gi|15924673|ref|NP_372207.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50] gi|15927261|ref|NP_374794.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315] gi|156980000|ref|YP_001442259.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3] gi|255006467|ref|ZP_05145068.2| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|54039693|sp|P67585|SYT_STAAN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|54042050|sp|P67584|SYT_STAAM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166225504|sp|A7X3A6|SYT_STAA1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|13701479|dbj|BAB42773.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus N315] gi|14247455|dbj|BAB57845.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus Mu50] gi|156722135|dbj|BAF78552.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus Mu3] Length = 645 Score = 253 bits (645), Expect = 5e-65, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 161/445 (36%), Gaps = 33/445 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD +L L T G+ WLP G + I +++ Sbjct: 229 KAHLQMLEERKERDHRKIGKELELFTN-SQLVGAGLPLWLPNGATIRREIERYIVDKEVS 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHI 122 G + P L + DL+ SG +D Y ++M ++ M+ P + I+ + Sbjct: 288 MGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPMNCPHHMMIYANKP 347 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ R E ++ + + + P+ K + ++ + Sbjct: 348 HSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMII 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDD 241 ++ G + R D + + + D + D+ Sbjct: 408 DVYKDFGFEDYSFRLS--------------YRDPEDKEKYFDDDDMWNKAENMLKEAADE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y DV ++ ++ + + +S ++ F ++ T Sbjct: 454 LGLSYEEAIGEAAFYGPKLDV---QVKTAMGKEETLSTAQLD----FLLPERFD----LT 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + G DG+ H + G + + + + +P +AP ++ +I + + Sbjct: 503 YIGQDGEHHRPVVIHR--GVVSTMERFVAFLTEETKGAFPTWLAPKQVQIIPVNV--DLH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ L G V DD E++G + A + P Q++VG K V +++V ++ Sbjct: 559 YDYARQLQDELKSQGVRVSIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRQY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + +E + +E I + Sbjct: 619 GSQDQETVEKDEFIWNLVDEIRLKK 643 >gi|319942329|ref|ZP_08016644.1| threonyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B] gi|319804202|gb|EFW01102.1| threonyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B] Length = 636 Score = 253 bits (645), Expect = 5e-65, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 134/444 (30%), Gaps = 41/444 (9%) Query: 5 KYFLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L + RD +L L + + G+ W G + +R Sbjct: 229 KAYLEMLAEAEKRDHRRLGRELDLF--HLQDEAPGMVFWHAKGWALWQVIEQFMRRVYQD 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L LW SG + Y M + ++ P + IF S ++ Sbjct: 287 NGYEEVKAPQLLDRSLWERSGHWAKYRDNMFT-TESENRYYALKPMNCPGHIQIFNSKLR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F D + F + Sbjct: 346 SYRDLPLRIGEFGQCHRNESSGSLHGLMRVRGFTQDDGHIFCTEDQILAEC-EAFTALVQ 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +++ G I + + P D + D + Sbjct: 405 KVYKTFGFTDIAYKVATRPAMR-----------------IGEDAVWDKAEHALMASLDAL 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 ++ A Y + H L D L + + ++ G A + Sbjct: 448 GIKYEVLVGEGAFYGPKIEYH---LKDCLGRSWQCGTVQVDFQMPGRLG--------AEY 496 Query: 303 KGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D + V + +G++ ++ G +W + + Sbjct: 497 VAEDNSRKIPVMLHRAILGSLERWIGMLIEEFAGAFPVW------LAPIQCAVTSITDNQ 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + A+L G V D E+I + L P ++VG K V ++ R Sbjct: 551 GAYAKDVAAKLHAAGLRVQTDLRSEKINYKIRELSLQKLPYILVVGEKEAQTGTVSVRAR 610 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 MSL+ I S Sbjct: 611 GGENLGVMSLDAFIERISTENRER 634 >gi|319776351|ref|YP_004138839.1| threonyl-tRNA synthetase [Haemophilus influenzae F3047] gi|329123506|ref|ZP_08252070.1| threonine--tRNA ligase [Haemophilus aegyptius ATCC 11116] gi|317450942|emb|CBY87169.1| threonyl-tRNA synthetase [Haemophilus influenzae F3047] gi|327471088|gb|EGF16543.1| threonine--tRNA ligase [Haemophilus aegyptius ATCC 11116] Length = 643 Score = 253 bits (645), Expect = 5e-65, Method: Composition-based stats. Identities = 76/445 (17%), Positives = 144/445 (32%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LAEYLTRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + LW ++G + +Y +++ ++ P + IF + Sbjct: 287 QYDYQEVKGPFMMDRVLWEKTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G +I ++ + P S E D Sbjct: 405 YDIYSTFGFTNIAVKLSTRPENRIGSDE-----------------MWDRAEGGLAAALAH 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L D L + ++ AT Sbjct: 448 NGLEYEIQEGEGAFYGPKIEF---ALRDCLGREWQCGTVQLDFALPGRLD--------AT 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ +I + G W +++ Sbjct: 497 YVAEDNSRKTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPTQAVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ +LS VG V D E++G + L P ++ G K +++ KV ++ Sbjct: 551 QADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRVPYMLVCGDKEIAEGKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R ++EE ++ N Sbjct: 611 RKGADLGTFTVEEFAEILKNQVRNR 635 >gi|238797380|ref|ZP_04640880.1| Threonyl-tRNA synthetase [Yersinia mollaretii ATCC 43969] gi|238718811|gb|EEQ10627.1| Threonyl-tRNA synthetase [Yersinia mollaretii ATCC 43969] Length = 642 Score = 253 bits (645), Expect = 5e-65, Method: Composition-based stats. Identities = 71/442 (16%), Positives = 142/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y + M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYAEHMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDE-VNSCIKMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E A++ + Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDEQWTRAES-----------------DLAAALTENGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ F + S A++ G Sbjct: 451 PFDYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGRLS----ASYIG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ + G W V +++ D Sbjct: 500 ENNDRQVPVMIHRAILGSIERFIGILTEEYAGFFPTWLAPVQVVVMNIT------DSQSD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L G D E+IG + L P ++ G K V K+ ++ R Sbjct: 554 YVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + V++ + Sbjct: 614 KDLGSLDVNVVVDQLLAEIRSR 635 >gi|92114261|ref|YP_574189.1| prolyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043] gi|114152183|sp|Q1QVL8|SYP_CHRSD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|91797351|gb|ABE59490.1| prolyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043] Length = 573 Score = 253 bits (645), Expect = 6e-65, Method: Composition-based stats. Identities = 128/237 (54%), Positives = 167/237 (70%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ + L+E P DA+I SH+LMLR GMI + S G+Y+WLPLG + L V I+REE Sbjct: 1 MRASQLLISTLKETPADADIVSHQLMLRAGMIRRLSSGLYTWLPLGLRTLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P++Q A+LW ESGR+D YG +LR+ DR+++ YGPTHEEV+TD+ R+ Sbjct: 61 MNRAGAQEVLMPSIQPAELWQESGRWDQYGNLLLRIRDRHERDFCYGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE RPRFGVMR+REF+MKDAYSFD+ G + SY+ M+ + Sbjct: 121 EIRSYKQLPSNFYQIQTKFRDETRPRFGVMRAREFIMKDAYSFDIDQAGLQRSYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y+RIF RLGL + A++G IGG SHEF VLAD+GE V D+ E Sbjct: 181 YMRIFTRLGLDFRAVEADNGDIGGSGSHEFQVLADSGEDAVIF-STGSDYAANIEKA 236 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 111/197 (56%), Gaps = 3/197 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + +D+ N D P+ K ARGIEVGH+F GTKYS M+AT +G+ Sbjct: 377 ERDVALPKVADLRNVVEGDPSPDGKGTLSIARGIEVGHVFQLGTKYSTAMNATVLDDNGQ 436 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEK 367 + MG YGIG RVVAA IE +HD GIIWPD++APF+I+L+ + A + R+ + Sbjct: 437 AVPLLMGCYGIGVTRVVAAAIEQNHDAGGIIWPDAIAPFEIALVPMNAHKSERVREYADT 496 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +Y +LS G DV DD + G +FA +L+G P +V++G + + + ++E K R Sbjct: 497 LYQQLSDAGFDVLIDDRDLRPGVKFADQELIGIPHRVVIGDRGLDNDELEYKGRRDSDVT 556 Query: 428 DMSLEEVINYASHRFSN 444 + E ++++ R + Sbjct: 557 MVPTEGLLSFLRERITK 573 >gi|72381873|ref|YP_291228.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A] gi|123759915|sp|Q46LV3|SYT_PROMT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|72001723|gb|AAZ57525.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Prochlorococcus marinus str. NATL2A] Length = 641 Score = 253 bits (645), Expect = 6e-65, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 151/445 (33%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y I + RD K L + + G+ W P G + IRE Sbjct: 228 LKEYLSRIEEAEKRDHRKLGKKYSLF--HSQEEAPGMVFWHPKGWTIYRILEDFIRETIT 285 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + LW +SG +D + ++M ++ P + IF + Sbjct: 286 KYDYQEVKSPQVVDRSLWEKSGHWDKFKEDMFTTT-SENREYAIKPMNCPCHIQIFNQGL 344 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F+ DA+ F + + Sbjct: 345 KSYRDLPIRLSEFGSCHRNEPSGALHGLMRVRNFVQDDAHIFCTDEQIQEE-VQNFIDLV 403 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G SI ++ + P+ S D D + + D Sbjct: 404 FEVYKTFGFDSILIKLSTRPVKR-----------------VGSDDIWDKSEKALSEALDS 446 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 S++ A Y + L D L + ++ +A+ Sbjct: 447 KGLDWSLLPGEGAFYGPKIEF---SLKDCLNRVWQCGTIQVDFSMPQRL--------NAS 495 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G+ + +G+ ++ + +P ++P +I ++ I + Sbjct: 496 YIDITGRKQTPVMLHRAILGSFERFIGILI---ENYSGNFPTWLSPIQIMIMGITDRN-- 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 +AC +L G D E++G + + P +I+G K +S++ ++ Sbjct: 551 -NEACFTAKDKLVDFGFRAEIDIRNEKVGFKIREHTMQRIPFLIIIGDKEEENSEISVRT 609 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R +MS+++ S Sbjct: 610 REGKDLGNMSIDKFKLIIDESISKK 634 >gi|307256244|ref|ZP_07538030.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306865263|gb|EFM97160.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 643 Score = 253 bits (645), Expect = 6e-65, Method: Composition-based stats. Identities = 71/444 (15%), Positives = 138/444 (31%), Gaps = 38/444 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LAEYLTRLEEAAKRDHRRIGKALDLY--HMQEEAPGLVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + LW +G + +Y +++ ++ P + IF + Sbjct: 287 EYDYQEVKGPFMMDRVLWERTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIRMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G +I ++ + P D Sbjct: 405 YDIYSTFGFSNIQVKLSTRPENR-----------------IGDDAMWDRAEDGLAKALTA 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L D L + ++ F + A Sbjct: 448 NGLSYEIQEGEGAFYGPKIEF---ALRDCLDREWQCGTIQLD----FALPGRLDASYVAE 500 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 +G+ V + +G++ +I + G W +++ Sbjct: 501 ---DNGRRTPVMIHRAILGSIERFIGIITEEYAGFFPTWLAPTQAVVMNIT------DSQ 551 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D +K+ LS G D E++G + L P ++ G K + KV ++ R Sbjct: 552 ADYVQKVTKALSDAGIRAKSDLRNEKVGFKVREHTLRRVPYMLVCGDKEIEAGKVSVRTR 611 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 +++E + ++ Sbjct: 612 KGADLGTFTIDEFVEILKNQVKAR 635 >gi|253583464|ref|ZP_04860662.1| threonine-tRNA ligase [Fusobacterium varium ATCC 27725] gi|251834036|gb|EES62599.1| threonine-tRNA ligase [Fusobacterium varium ATCC 27725] Length = 637 Score = 253 bits (645), Expect = 6e-65, Method: Composition-based stats. Identities = 81/441 (18%), Positives = 165/441 (37%), Gaps = 42/441 (9%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E R D +L L + ++ G +LP G + + + R E Sbjct: 228 KAYLTLLEEAERRDHRKLGKELDLF--FVSEYGPGFPIFLPKGMVIRNTLIDLWRREHTL 285 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E++ P + + +LW SG + +Y + M +D P + ++ + Sbjct: 286 AGYQEITTPIMLNKELWEISGHWFNYRENMYTST-IDDTEFAIKPMNCPGGILAYKYQLH 344 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++ P ++ R E G+MR R F DA+ F +TP+ + + Sbjct: 345 SYKDFPIRCGELGTVHRHEFSGALHGLMRVRSFTQDDAHIF-MTPDQIEEEIIGVVELID 403 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + + +L E+ + T + S + + + D I Sbjct: 404 KFYSKLFG-----------------FEYHIELSTKPEKAIGSNEIWEKAEAALAGALDKI 446 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y D K+ D++ + ++ F ++ ++ Sbjct: 447 GKPYKLNPGDGAFYGPKLDF---KIKDAIGRTWQCGTIQLD----FNLPERFD----ISY 495 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DG+ H + G++ ++ + +P +AP ++ ++ I Sbjct: 496 IGEDGEKHRPVMIHRVVYGSIERFIGILI---EHFAGAFPLWLAPTQVKILTIN---DEV 549 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEIKH 420 ++I+ L + G DD E IG + A+ P+Q+I+G V + +V I+ Sbjct: 550 VPYAKEIFKALQERGIRAEIDDRAESIGYKIREANGKYKIPVQLILGKNEVENREVNIRK 609 Query: 421 RLTGIREDMSLEEVINYASHR 441 + +E M L+E ++ Sbjct: 610 FGSQQQESMKLDEFLDIIVDE 630 >gi|315126513|ref|YP_004068516.1| threonyl-tRNA synthetase [Pseudoalteromonas sp. SM9913] gi|315015027|gb|ADT68365.1| threonyl-tRNA synthetase [Pseudoalteromonas sp. SM9913] Length = 636 Score = 253 bits (645), Expect = 6e-65, Method: Composition-based stats. Identities = 77/448 (17%), Positives = 150/448 (33%), Gaps = 41/448 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E RD L L + + G+ W G + +RE+ Sbjct: 227 KQLKAYLKRLEEAEKRDHRRIGKALDL--WHWQEEAPGMVFWHNDGWSIYRELEEFVREK 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 E+ P + LW +SG ++ Y + M + + P + IF Sbjct: 285 LREYQYEEVKGPMMMDRSLWEKSGHWEKYSEAMFT-TESEKREYAIKPMNCPGHVQIFNQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F + + Sbjct: 344 GLKSYRDLPLRMAEFGCCHRNEPSGALHGLMRVRGFTQDDAHVFCTEEQIMDE-VSACIK 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + G + I ++ + P E A+ + + + +F Sbjct: 403 MVYDTYETFGFEKIVVKLSTRPEQRIGEDEMWDKAELALAD----------ALKANDIEF 452 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D + A Y + L+D L + ++ G Sbjct: 453 D-------YLPGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLDFALPGRLG-------- 494 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 AT+ + + + +G++ ++ + G W +++ Sbjct: 495 ATYVAENNERRTPVMIHRAILGSIERFIGILTEEYAGLFPTWLAPKQVVIMNIT------ 548 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 ++I +L+K+G D E+IG + L P ++VG K V +V + Sbjct: 549 DKQAPYVQEIVQKLNKLGIRAAADLRNEKIGFKIREHTLKRIPYLLVVGDKEVEQQEVAV 608 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNNR 446 + R ++++ I S N + Sbjct: 609 RTRTGEDLGKFNVDDFIAKISEEIKNRQ 636 >gi|238783384|ref|ZP_04627407.1| Threonyl-tRNA synthetase [Yersinia bercovieri ATCC 43970] gi|238715629|gb|EEQ07618.1| Threonyl-tRNA synthetase [Yersinia bercovieri ATCC 43970] Length = 642 Score = 253 bits (645), Expect = 6e-65, Method: Composition-based stats. Identities = 71/442 (16%), Positives = 142/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y + M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYAEHMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRLAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDE-VNSCIKMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E A++ + Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDEQWTRAES-----------------DLAAALTENGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ F + S A++ G Sbjct: 451 PFDYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGRLS----ASYIG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ ++ + G W V +++ D Sbjct: 500 ENNDRQVPVMIHRAILGSIERFIGILTEEYAGFFPTWLAPVQVVVMNIT------DSQSD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L G D E+IG + L P ++ G K V K+ ++ R Sbjct: 554 YVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + V++ + Sbjct: 614 KDLGSLDVNVVVDQLLAEIRSR 635 >gi|332306910|ref|YP_004434761.1| threonyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174239|gb|AEE23493.1| threonyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 638 Score = 253 bits (645), Expect = 6e-65, Method: Composition-based stats. Identities = 82/448 (18%), Positives = 153/448 (34%), Gaps = 41/448 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E RD L L + + G+ W G + +R + Sbjct: 227 KQLKAYLNRLEEAEKRDHRKIGKALDLF--HWQEEAPGMVFWHNDGWSIYTELEKFVRSK 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 E+ P + LW +SG +D Y + M + P + IF Sbjct: 285 LREYEYQEVKAPLMMDRSLWEKSGHWDKYAENMFTTT-SEKREYAVKPMNCPGHVQIFNQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F T + Sbjct: 344 GLKSYRDLPLRMAEFGCCHRNEPSGALHGLMRVRGFTQDDAHIFC-TEDQILAEVGGCID 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 S I+ G ++I ++ + P S E D Sbjct: 403 SVYEIYKIFGFENISVKLSTRPEKRVGSDE-----------------VWDKAEKELAEAL 445 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + A Y + L D L + ++ G+ Sbjct: 446 TSKGIDFQYLPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFSMPGRLGS------- 495 Query: 300 ATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 T+ DG+ V + +G++ ++ + +P +AP + ++NI + Sbjct: 496 -TYVAEDGERKVPVMIHRAILGSLERFIGILI---EEYSGFFPLWLAPTQAVVMNITDN- 550 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + +K+ +L ++G D E+IG + L P ++VG K + ++ + Sbjct: 551 --QSEYAQKVVKKLKEIGIRAKSDLRNEKIGFKIREHTLRRVPYLLVVGDKEIEAGEIAV 608 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNNR 446 + R MS++ I A + + + Sbjct: 609 RSRKGDDLGKMSVDAFIELACEQIKSKQ 636 >gi|323143349|ref|ZP_08078037.1| threonine--tRNA ligase [Succinatimonas hippei YIT 12066] gi|322416867|gb|EFY07513.1| threonine--tRNA ligase [Succinatimonas hippei YIT 12066] Length = 644 Score = 253 bits (645), Expect = 6e-65, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 148/442 (33%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + RD + KL L Q + G+ W G + +RE ++ Sbjct: 232 YLKKREEAAKRDHRVLGKKLDLF--HFQQEAPGMVFWHNDGWTIYRVIENFMREMLHKYH 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 IE+ P + LW SG +D Y + M ++ P + IF S +SY Sbjct: 290 YIEVKTPQIMDRVLWERSGHWDKYAENMFT-TSSENRDYAIKPMNCPGAIQIFNSRTRSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G++R R F DA+ F + + + + Y Sbjct: 349 RDLPIRMAEFGNCHRNEPSGSLHGLLRVRAFEQDDAHIFCTEDQIMTEVSDCIRMVYDTY 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + ++ + P S E A+ + + P E Sbjct: 409 SN-FGFTKVDVKLSTRPEKRIGSDEIWDKAEADLVEALKLNNLEYELQPGE--------- 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L DSL + ++ F + + A + G Sbjct: 459 --------GAFYGPKIEF---TLHDSLDRAWQCGTVQLD----FSLPAR----LDAHYIG 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D ++H + +G++ V+ G W + +++ D Sbjct: 500 EDNQEHTPVMIHRAMLGSIERFLGVLTEEFAGSFPTWLAPIQAVVMNIT------DGQVD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L + G V D +++G + L+ P ++ G + V ++ R Sbjct: 554 YVKQVAQKLDEAGIRVKSDLRNDKVGFKIREHTLMHVPYMLVCGDREAESGMVAVRTRKG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M L+++I + Sbjct: 614 QDLGAMKLDDLIKMIKSDIISR 635 >gi|294667581|ref|ZP_06732796.1| threonyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602701|gb|EFF46137.1| threonyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 634 Score = 253 bits (645), Expect = 6e-65, Method: Composition-based stats. Identities = 72/438 (16%), Positives = 138/438 (31%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + + RD L + + + G+ W P G V +R+ +G Sbjct: 232 YILRMEEADKRDHRRIGKAQDLF--HLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D+Y M + + P + +F + SY Sbjct: 290 YGEVRCPQILDVSLWQKSGHWDNYQDAMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F L + L + Sbjct: 349 RDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCL-ESQIESEVTAFHQQALAV 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P D + + Sbjct: 408 YTAFGFDDIQIKIALRPEKR-----------------LGDDATWDKAESALRSALGVCGV 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + H L D++ ++ ++ G A + Sbjct: 451 EWQELPGEGAFYGPKIEYH---LKDAIGRTWQLGTMQVDFMMPGRLG--------AEYVD 499 Query: 305 AD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + K H V + +G+M ++ H G W V ++ + Sbjct: 500 ENSQKKHPVMLHRAIVGSMERFIGILIEHHAGAFPSWLAPVQVVVANIT------DAQAE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L+ G V D E+IG + + P ++VG + + V ++ R Sbjct: 554 YVDSVRKTLANQGFRVSADLRNEKIGYKIREHTMQRVPYLLVVGDREKENGAVAVRTRSG 613 Query: 424 GIREDMSLEEVINYASHR 441 M++ I Sbjct: 614 EDLGTMTVSAFIERLQAE 631 >gi|213963363|ref|ZP_03391619.1| threonyl-tRNA synthetase [Capnocytophaga sputigena Capno] gi|213954031|gb|EEB65357.1| threonyl-tRNA synthetase [Capnocytophaga sputigena Capno] Length = 647 Score = 253 bits (645), Expect = 6e-65, Method: Composition-based stats. Identities = 84/438 (19%), Positives = 156/438 (35%), Gaps = 38/438 (8%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L T ++ +G+ WLP G + + A +R+ Q + G ++ P Sbjct: 237 AKKRDHRKLGKELELFT-FSNKVGQGLPLWLPKGAALRERLEAFLRKAQKQAGYEQVVTP 295 Query: 73 TLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 + +L+V SG +D YGK+ + + + P + +I+ SH SY++LP Sbjct: 296 HIGHKNLYVTSGHWDKYGKDSFQPIATPNEGEEYLLKPMNCPHHCEIYNSHPWSYKDLPK 355 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F + +R E G+ R R F DA+ F TPE + + L +F LG Sbjct: 356 RFAEFGTVYRYEQSGELHGLTRVRCFTQDDAHIFC-TPEQLDDEFKHVIDLVLYVFGSLG 414 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + D + D + + LN ++ Sbjct: 415 FDNFTAQVSLR--------------DPENLSKYIGSDENWAKAENAIINAAKEKGLNYVI 460 Query: 250 E-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 E A Y D + D+L + ++ ++ +KGAD + Sbjct: 461 ETGEAAFYGPKLDFM---VKDALGRSWQLGTIQVDYNLP--------ERFDLWYKGADNE 509 Query: 309 DHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 H + G+M A++ G +W + I + + + +K Sbjct: 510 MHRPVMIHRAPFGSMERFVAILLEHTAGNFPLW------LNPNQAIILSLSEKYENYAQK 563 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + + L D+ E +G + A+ P +IVG + V ++ R Sbjct: 564 VLSLLENSDIRTLIDNRAETMGKKIREAETQKIPYMLIVGENEEKEGTVSVRKRGGEDLG 623 Query: 428 DMSLEEVINYASHRFSNN 445 MS+E + + + Sbjct: 624 SMSVEAFAKLINDEVAAS 641 >gi|300814791|ref|ZP_07095034.1| threonine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511099|gb|EFK38356.1| threonine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 636 Score = 253 bits (645), Expect = 6e-65, Method: Composition-based stats. Identities = 74/446 (16%), Positives = 150/446 (33%), Gaps = 41/446 (9%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + +Y + RD +L L + +H+ G + P G +N+ + + Sbjct: 226 KLDEYIEKREEAEKRDHRKLGRELDLFS--MHEEGPGFPFFHPNGMIIRNNLLSWWKNVL 283 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G E+ P + + DLW SG +D Y + M + +++ P + T I+ + Sbjct: 284 QERGYGEILTPVILNEDLWHRSGHWDHYKENM-YFTEIDEEGYAVKPMNCPGSTLIYSTT 342 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SYR+LP + + L R EL G+ R R F DA+ + L + + + Sbjct: 343 PHSYRDLPLRYAEFGLVHRHELSGALHGLFRVRSFTQDDAHIYCLPNQIKSEVFE--IID 400 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + + + + P E + + + Sbjct: 401 LANLLYDTFGFKYSVELSTRPDDYMGDLE-----------------SWNEAEKALKEALE 443 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +I E A Y D H E D++ + ++ F Sbjct: 444 EKGMPYTINEGDGAFYGPKIDYHLE---DAIGRTWQCGTIQLD----FQLPQ----NFEL 492 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 T+ DG + G++ ++ GK +W + I + Sbjct: 493 TYVAEDGSKKRPVMLHRALFGSVERFMGILIEHFAGKFPLW------LSPVQVEIIPVSE 546 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + +++ +L K G V D+ E++G + A L +++G K + K+ ++ Sbjct: 547 KFKPYAGEVFDQLKKAGIRVKIDERAEKVGYKIREAQLKKVNYMLVIGEKETASHKLSVR 606 Query: 420 HRLTGIREDMSLEEVINYASHRFSNN 445 R +D+ + + I Sbjct: 607 KRSGEEVKDVEVSKFIEDLKEEIKTK 632 >gi|121533721|ref|ZP_01665548.1| prolyl-tRNA synthetase [Thermosinus carboxydivorans Nor1] gi|121307712|gb|EAX48627.1| prolyl-tRNA synthetase [Thermosinus carboxydivorans Nor1] Length = 567 Score = 253 bits (645), Expect = 6e-65, Method: Composition-based stats. Identities = 117/246 (47%), Positives = 161/246 (65%), Gaps = 1/246 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S + P L+E P +AE+ SH+LMLR GMI + + GIY++LPL + L + IIREE Sbjct: 1 MRASNLYAPTLRETPAEAEVISHQLMLRAGMIRKAAGGIYTYLPLAWRVLKKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P +Q A++W ++GR+D YG EM RL DR+ + GPTHEE++T + R Sbjct: 61 MDAKGGQELLMPIVQPAEIWKKTGRWDVYGDEMFRLKDRHQRDFCLGPTHEEMITTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ K+RDE+RPRFG+MR REF+MKD YSFD EG SYNKM+ + Sbjct: 121 EVRSYRQLPLLLYQIQNKYRDEIRPRFGLMRGREFIMKDLYSFDRDEEGLNESYNKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y R+F R GL P+ A+SG IGG SHEF+VLA++GE + D+ E + Sbjct: 181 YTRVFTRCGLTFRPVEADSGAIGGSGSHEFMVLAESGEAAIVYCTTC-DYAANVEKAELK 239 Query: 241 DIISLN 246 I ++ Sbjct: 240 PIHAME 245 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 67/187 (35%), Positives = 102/187 (54%), Gaps = 2/187 (1%) Query: 259 TSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ + D P +ARGIEVG +F TKYS + AT+ +G++ + MG Sbjct: 379 VADIRLIQENDPCPRCGAPVKTARGIEVGQVFKLYTKYSNALGATYLDENGQERPIVMGC 438 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R +AA IE +HD GIIWP +APF + +I + A ++ E++Y L+K G Sbjct: 439 YGIGVTRTMAAAIEQNHDENGIIWPVPIAPFHVVVIPVNAKEEAQMSLAEEVYTELNKAG 498 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + DD E+ G +F ADL+G+PL+V +G K +S+ +VE+K R TG + Sbjct: 499 VEAILDDRNERPGVKFKDADLIGYPLRVTIGPKALSEGRVEVKVRRTGEIIYFDKANYVR 558 Query: 437 YASHRFS 443 + Sbjct: 559 EVQALLA 565 >gi|192359534|ref|YP_001982928.1| prolyl-tRNA synthetase [Cellvibrio japonicus Ueda107] gi|190685699|gb|ACE83377.1| prolyl-tRNA synthetase [Cellvibrio japonicus Ueda107] Length = 611 Score = 253 bits (645), Expect = 6e-65, Method: Composition-based stats. Identities = 129/282 (45%), Positives = 181/282 (64%), Gaps = 1/282 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ + L+E P DAE+ SH+LMLR GMI + + G+Y+WLPLG + L V I+REE Sbjct: 37 MRSSRFLIATLKETPADAEVISHQLMLRAGMIRKMASGLYNWLPLGLRVLRKVETIVREE 96 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GA+E+ +P +Q A+LW ESGR+ YG E+LR+ DR+D+ GPTHEEV+TD+ R+ Sbjct: 97 MNKSGAMEVLMPVVQPAELWEESGRWQQYGPELLRITDRHDRPFCLGPTHEEVITDLIRN 156 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF LT E + +Y+ M + Sbjct: 157 ELKSYKQLPANFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHLTQESLQQTYDVMHTT 216 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL P+ A++G IGG SHEF VLAD+GE + + D+ E + Sbjct: 217 YCNIFSRLGLGYRPVLADTGSIGGAYSHEFHVLADSGEDYIVF-SNGSDYAANIEKAEAL 275 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 + + A E++ L + + + + + Sbjct: 276 PPAAPRPAPQHVLQEVATPGQHAIEEVCAFLKVSAQQTVKTL 317 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 72/220 (32%), Positives = 108/220 (49%), Gaps = 4/220 (1%) Query: 226 DFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 DF + F EQ AP A + RGIEVG Sbjct: 393 HLADFVCGANKDGFHLTGVNWERDEQ--APLVADIRNVVTGDPSPCGKGTLEIKRGIEVG 450 Query: 286 HIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 HIF GTKYS M A +GK+ + MG YGIG RVVAA IE + D GIIWPD++A Sbjct: 451 HIFQLGTKYSDAMKARVLDENGKEQTMIMGCYGIGVTRVVAAAIEQNFDDNGIIWPDAIA 510 Query: 346 PFKISLINIKA-HDQVCRDACEKIYARLSKVGCDVFW-DDMGEQIGSQFAVADLLGFPLQ 403 PF I+++ I + CE++YA+LS G DV D+ ++G A DL+G P + Sbjct: 511 PFHIAIVPINMAKSEAVATKCEELYAQLSAAGLDVLLMDEDKARLGVMLADTDLMGIPHR 570 Query: 404 VIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 ++VG + + +E K R ++++++ +++ + + Sbjct: 571 IVVGDRGLEAGSIEYKGRRDAEKQEIAVGDIVEFLKAQVK 610 >gi|317487453|ref|ZP_07946240.1| threonyl-tRNA synthetase [Bilophila wadsworthia 3_1_6] gi|316921312|gb|EFV42611.1| threonyl-tRNA synthetase [Bilophila wadsworthia 3_1_6] Length = 646 Score = 253 bits (645), Expect = 6e-65, Method: Composition-based stats. Identities = 80/440 (18%), Positives = 149/440 (33%), Gaps = 40/440 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y I + RD +L L + G+ WLP G + +R E Sbjct: 229 LKEYLNRIEEAKRRDHRKLGKELDLFAFH-EDVAAGMVFWLPKGMLLRTILEDFLRREHI 287 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G + P + +LW +SG Y +Y + M + P + I+ +H+ Sbjct: 288 KRGYQLVQGPQVLRRELWEQSGHYANYRENM-YFTEIEGDMYGIKPMNCVSHMLIYNAHL 346 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR LP ++++ + R E G++R R+F DA+ + Sbjct: 347 RSYRELPQRYFELGVVHRHEKSGVLHGLLRVRQFTQDDAHIICAPEQLEDEII------- 399 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + A + ++ V+ T + S + + + + Sbjct: 400 ------------GVIALVRDLMALFGFQYRVVISTKPAKAIGSDEAWELATNALIKAVER 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 +I A Y DV K+ D++ ++S + F ++ Sbjct: 448 ANLSYTINAGDGAFYGPKIDV---KVTDAIGREWQLSTIQCD----FTLPERF----ELE 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G DG+ H + +G++ V+ + G W V +++ Sbjct: 497 YVGQDGERHRPVMVHRAILGSLERFIGVLTEHYAGAFPTWLAPVQAKILTVT------DA 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 E+ L K G D E++G + A L P ++VG K V V ++ Sbjct: 551 QNAFAEEACEALRKQGIRAEVDTRNEKLGFKVREAQLAKIPYILVVGDKEVEARSVNVRL 610 Query: 421 RLTGIREDMSLEEVINYASH 440 R SL+EV Sbjct: 611 RTGENLGVKSLDEVAALVQE 630 >gi|289668713|ref|ZP_06489788.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 634 Score = 253 bits (645), Expect = 6e-65, Method: Composition-based stats. Identities = 72/438 (16%), Positives = 139/438 (31%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + + RD L + + + G+ W P G V +R+ +G Sbjct: 232 YILRMEEADKRDHRRIGRAQDLF--HLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D+Y M + + P + +F + SY Sbjct: 290 YGEVRCPQILDVSLWQKSGHWDNYQDAMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F L + L + Sbjct: 349 RDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCL-ESQIESEVTAFHQQALAV 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P D + + Sbjct: 408 YTAFGFDDIQIKIALRPEKR-----------------LGDDATWDKAEAALRSALGVCGV 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + H L D++ ++ ++ G A + Sbjct: 451 EWQELPGEGAFYGPKIEYH---LKDAIGRTWQLGTMQVDFMMPGRLG--------AEYVD 499 Query: 305 AD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + K H V + +G+M ++ H G W V +++ + Sbjct: 500 ENSQKKHPVMLHRAIVGSMERFIGILIEHHAGAFPSWLAPVQVVVVNIT------DAQAE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L+ G V D E+IG + L P ++VG + + V ++ R Sbjct: 554 YVDSVRKTLANQGFRVSADLRNEKIGYKIREHTLQRVPYLLVVGDREKENGAVAVRTRSG 613 Query: 424 GIREDMSLEEVINYASHR 441 M++ + Sbjct: 614 EDLGTMTVSAFVERLQAE 631 >gi|209966088|ref|YP_002299003.1| threonyl-tRNA synthetase ThrS [Rhodospirillum centenum SW] gi|238065118|sp|B6IV67|SYT_RHOCS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|209959554|gb|ACJ00191.1| threonyl-tRNA synthetase ThrS [Rhodospirillum centenum SW] Length = 651 Score = 253 bits (645), Expect = 6e-65, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 155/442 (35%), Gaps = 44/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 I + RD ++ L + + + G W P G + IR + + G Sbjct: 233 LHQIEEAEKRDHRKLGREMDLF--HVQEEAVGSVFWHPKGWALYRTLENYIRTKLDAAGY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRL-----ADRNDKAMIYGPTHEEVMTDIFRSH 121 +E+ P L + L+ SG +D YG M ++ D +K + P + IFR Sbjct: 291 VEVRTPQLYDSSLFKASGHWDMYGDNMFKIRESVAEDGTEKFLGVKPMNCPAHVQIFRQG 350 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR+LP + R+E G++R R F DA+ F + + + + F Sbjct: 351 LKSYRDLPLRMAEFGNCHRNEPSGALHGILRVRNFTQDDAHIFCTEDQVGQEA-KEYFAL 409 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 L ++ LG I ++ P + E D S Sbjct: 410 QLGVYKDLGFDKIAVKLALRPDVRLGTDE-----------------TWDKAEESLRVALR 452 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + A Y + H L D++ + + ++ F + + A Sbjct: 453 ANDLEFEELPGEGAFYGPKVEFH---LTDAIGRSWQCGTLQLD----FQLPER----LDA 501 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 ++ G DG H + +G++ ++ + GK +W V +++ Sbjct: 502 SYIGQDGARHRPVMLHRAILGSLERFIGMMIEHYAGKFPLWLAPVQVVVATIV------S 555 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + + L + G V D E+I + L P+ ++VG++ V ++ Sbjct: 556 EADAYAQTVAETLRRAGLRVEADVRNEKINLKVREHSLAKVPVMLVVGAREAEQGTVAVR 615 Query: 420 HRLTGIREDMSLEEVINYASHR 441 +E ++L + + Sbjct: 616 RLGGKDQEVLALGDAVARLKDE 637 >gi|288553677|ref|YP_003425612.1| threonyl-tRNA synthetase [Bacillus pseudofirmus OF4] gi|288544837|gb|ADC48720.1| threonyl-tRNA synthetase [Bacillus pseudofirmus OF4] Length = 643 Score = 252 bits (644), Expect = 7e-65, Method: Composition-based stats. Identities = 76/433 (17%), Positives = 162/433 (37%), Gaps = 31/433 (7%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L + + + +G+ WLP G + I +++ R G + P Sbjct: 241 AKERDHRKLGKELGIFA-LSQKVGQGLPLWLPKGATVRRVIERYIVDKEERLGYQHVYTP 299 Query: 73 TLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 L S++L+ SG +D Y +M + +R+++ + P + +++ ++SYR LP Sbjct: 300 ILGSSELYKTSGHWDHYKDDMFPVMERDNEEFVLRPMNCPHHMMVYKQDMRSYRQLPLRI 359 Query: 133 YQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E+ ++ + + P+ K + ++ ++ GL Sbjct: 360 AELGMMHRYEMSGAVSGLQRVRGMTLNDAHIFCRPDQIKEEFLRVVYLIQEVYKDFGLDD 419 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIISLNSIVEQ 251 R D + + + D M S D++ E Sbjct: 420 YKFRLS--------------YRDPEDKEKYFDDDAMWEKAQSMLKEAMDELDVDYYEAEG 465 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A Y DV ++ +L +++ +S ++ F ++ T+ G DG+ H Sbjct: 466 EAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERFD----LTYVGEDGQQHR 514 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + G + + + + +P +AP ++ +I + V D +K+ Sbjct: 515 PVVVHR--GVVSTMERFVAFLLEEYKGAFPTWLAPVQVQVIPVSP--DVHLDYAKKVQDA 570 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L + G V D+ E+IG + A + P +++G K + V I+ E L Sbjct: 571 LQQAGARVEIDERNEKIGYKIREAQMQKIPYMLVLGDKEMESGAVNIRKYGEQASESKEL 630 Query: 432 EEVINYASHRFSN 444 + I+ + Sbjct: 631 QAFISDLAEELKK 643 >gi|282916943|ref|ZP_06324701.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139] gi|283770747|ref|ZP_06343639.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19] gi|282319430|gb|EFB49782.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139] gi|283460894|gb|EFC07984.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19] Length = 645 Score = 252 bits (644), Expect = 7e-65, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 161/445 (36%), Gaps = 33/445 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD +L L T G+ WLP G + I +++ Sbjct: 229 KAHLQMLEERKERDHRKIGKELELFTN-SQLVGAGLPLWLPNGATIRREIERYIVDKEVS 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHI 122 G + P L + DL+ SG +D Y ++M ++ M+ P + I+ + Sbjct: 288 MGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPMNCPHHMMIYANKP 347 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ R E ++ + + + P+ K + ++ + Sbjct: 348 HSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMII 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDD 241 ++ G + R D + + + D + D+ Sbjct: 408 DVYKDFGFEDYSFRLS--------------YRDPEDKEKYFDDDDMWNKAENMLKEAADE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y DV ++ ++ + + +S ++ F ++ T Sbjct: 454 LGLSYEEAIGEAAFYGPKLDV---QVKTAMGKEETLSTAQLD----FLLPERFD----LT 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + G DG+ H + G + + + + +P +AP ++ +I + + Sbjct: 503 YIGQDGEHHRPVVIHR--GVVSTMERFVAFLTEETKGAFPTWLAPKQVQIIPVNV--DLH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ L G V DD E++G + A + P Q++VG K V +++V ++ Sbjct: 559 YDYARQLQDELKSQGVRVSIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRQY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + +E + +E I + Sbjct: 619 GSQDQETVEKDEFIWNLVDEIRLKK 643 >gi|257467995|ref|ZP_05632091.1| threonyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185] gi|317062281|ref|ZP_07926766.1| threonine-tRNA ligase [Fusobacterium ulcerans ATCC 49185] gi|313687957|gb|EFS24792.1| threonine-tRNA ligase [Fusobacterium ulcerans ATCC 49185] Length = 637 Score = 252 bits (644), Expect = 7e-65, Method: Composition-based stats. Identities = 80/441 (18%), Positives = 165/441 (37%), Gaps = 42/441 (9%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E R D +L L + ++ G +LP G + + + R E Sbjct: 228 KAYLTLLEEAERRDHRKLGKELDLF--FVSEYGPGFPIFLPKGMVIRNTLIDLWRREHTL 285 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E++ P + + +LW SG + +Y + M ++ P + ++ + Sbjct: 286 AGYQEITTPIMLNKELWEISGHWFNYRENMYTST-IDETEFAIKPMNCPGGILAYKYQLH 344 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++ P ++ R E G+MR R F DA+ F +TP+ + + Sbjct: 345 SYKDFPIRCGELGTVHRHEFSGALHGLMRVRSFTQDDAHIF-MTPDQIEEEIIGVVELID 403 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + + +L E+ + T + S + + + D I Sbjct: 404 KFYSKLFG-----------------FEYHIELSTKPEKAIGSNEIWEKAEAALAGALDKI 446 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y D K+ D++ + ++ F ++ ++ Sbjct: 447 GKPYKLNPGDGAFYGPKLDF---KIKDAIGRTWQCGTIQLD----FNLPERFD----ISY 495 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DG+ H + G++ ++ + +P +AP ++ ++ I Sbjct: 496 IGEDGEKHRPVMIHRVVYGSIERFIGILI---EHFAGAFPLWLAPTQVKILTIN---DEV 549 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEIKH 420 ++I+ L + G DD E IG + A+ P+Q+I+G V + +V I+ Sbjct: 550 VPYAKEIFKALQERGIRAEIDDRAESIGYKIREANGKYKVPVQLILGKNEVENREVNIRK 609 Query: 421 RLTGIREDMSLEEVINYASHR 441 + +E M L+E ++ Sbjct: 610 FGSQQQESMKLDEFLDIIVDE 630 >gi|126640661|ref|YP_001083645.1| threonyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978] Length = 549 Score = 252 bits (644), Expect = 7e-65, Method: Composition-based stats. Identities = 77/441 (17%), Positives = 142/441 (32%), Gaps = 38/441 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD L L + + + G+ W G + +R+ Q G Sbjct: 140 YIKRIEEAEKRDHRKIGKALDLF--HMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNG 197 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +Y + M + P + +F +KSY Sbjct: 198 YQEIKTPQIVDFTLWEKSGHAANYAENMFT-THSESRNYAVKPMNCPCHVQVFNQGLKSY 256 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + K L + Sbjct: 257 RDLPIRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGKE-VADFIKLTLDV 315 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + M+ + P D S D Sbjct: 316 YKDFGFEEVQMKLSTRPEKR-----------------VGDDALWDLAEKSLADALDAAGL 358 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + + F + Sbjct: 359 EWELQPGEGAFYGPKIEF---SLKDCLGRVWQCGTIQCD----FNLPVRLDASY---VTE 408 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + +D V + +G+ ++ + P ++P + ++NI +A Sbjct: 409 ENERDQPVMLHRAILGSFERFIGILI---EHYAGFMPPWLSPVQACVMNITDS---QAEA 462 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++ A+L + G D E+IG + L P +++G + V + V ++ R Sbjct: 463 SEQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGK 522 Query: 425 IREDMSLEEVINYASHRFSNN 445 MS++ I+ + Sbjct: 523 NLGTMSVDAFIDLVKSAVAER 543 >gi|283470950|emb|CAQ50161.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398] Length = 645 Score = 252 bits (644), Expect = 7e-65, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 156/445 (35%), Gaps = 33/445 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD +L L T G+ WLP G + I +++ Sbjct: 229 KAHLQMLEERKERDHRKIGKELELFTN-SQLVGAGLPLWLPNGATIRREIERYIVDKEVS 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHI 122 G + P L + DL+ SG +D Y ++M ++ M+ P + I+ + Sbjct: 288 MGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPMNCPHHMMIYANKP 347 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ R E ++ + + + P+ K + ++ + Sbjct: 348 HSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMII 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDD 241 ++ G + R D + + + D + D+ Sbjct: 408 DVYKDFGFEDYSFRLS--------------YRDPEDKEKYFDDDDMWNKAENMLKEAADE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y DV ++ ++ + + +S ++ F ++ T Sbjct: 454 LGLSYEEAIGEAAFYGPKLDV---QVKTAMGKEETLSTAQLD----FLLPERFD----LT 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + G DG+ H + G+ + + + +I +NI H Sbjct: 503 YIGQDGEHHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPKQVQIIPVNIDLH---- 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ L G V DD E++G + A + P Q++VG K V +++V ++ Sbjct: 559 YDYARQLQDELKSQGVRVSIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRQY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + +E + +E I + Sbjct: 619 GSQDQETVEKDEFIWNLVDEIRLKK 643 >gi|307249432|ref|ZP_07531421.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858506|gb|EFM90573.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 643 Score = 252 bits (644), Expect = 7e-65, Method: Composition-based stats. Identities = 70/445 (15%), Positives = 138/445 (31%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LAEYLTRLEEAAKRDHRRIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + LW +G + +Y +++ ++ P + IF + Sbjct: 287 EYDYQEVKGPFMMDRVLWERTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIRMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G +I ++ + P D Sbjct: 405 YDIYSTFGFSNIQVKLSTRPENR-----------------IGDDAMWDRAEDGLAKALTA 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L D L + ++ A+ Sbjct: 448 NGLSYEIQEGEGAFYGPKIEF---ALRDCLDREWQCGTIQLDFALPGRLD--------AS 496 Query: 302 FKGA-DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +G+ V + +G++ +I + G W +++ Sbjct: 497 YVAEDNGRRTPVMIHRAILGSIERFIGIITEEYAGFFPTWLAPTQAVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ LS G D E++G + L P ++ G K + KV ++ Sbjct: 551 QADYVQKVTKALSDAGIRAKSDLRNEKVGFKVREHTLRRVPYMLVCGDKEIEAGKVSVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R +++E + ++ Sbjct: 611 RKGADLGTFTIDEFVEILKNQVKAR 635 >gi|109898814|ref|YP_662069.1| threonyl-tRNA synthetase [Pseudoalteromonas atlantica T6c] gi|109701095|gb|ABG41015.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Pseudoalteromonas atlantica T6c] Length = 638 Score = 252 bits (644), Expect = 7e-65, Method: Composition-based stats. Identities = 81/448 (18%), Positives = 152/448 (33%), Gaps = 41/448 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E RD L L + + G+ W G + +R + Sbjct: 227 KQLKAYLNRLEEAEKRDHRKIGKALDLF--HWQEEAPGMVFWHNDGWSIYTELEKFVRSK 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 E+ P + LW +SG +D Y + M + P + IF Sbjct: 285 LREYEYDEVKAPLMMDRSLWEKSGHWDKYAENMFTTT-SEKREYAVKPMNCPGHVQIFNQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F + Sbjct: 344 GLKSYRDLPLRMAEFGCCHRNEPSGALHGLMRVRGFTQDDAHIFCTDDQILAE-VGGCID 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 S I+ G ++I ++ + P S E D Sbjct: 403 SVYEIYKIFGFENISVKLSTRPEKRVGSDE-----------------VWDKAEKELAEAL 445 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + A Y + L D L + ++ G+ Sbjct: 446 TSKGIDFQYLPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFSMPGRLGS------- 495 Query: 300 ATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 T+ DG+ V + +G++ ++ + +P +AP + ++NI + Sbjct: 496 -TYVAEDGERKVPVMIHRAILGSLERFIGILI---EEYSGFFPLWLAPTQAVVMNITDN- 550 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + +K+ +L ++G D E+IG + L P ++VG K + ++ + Sbjct: 551 --QSEYAQKVVKKLKEIGIRAKSDLRNEKIGFKIREHTLRRVPYLLVVGDKEIEAGEIAV 608 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNNR 446 + R MS++ I A + + + Sbjct: 609 RSRKGDDLGKMSVDAFIELACEQIKSKQ 636 >gi|148264838|ref|YP_001231544.1| prolyl-tRNA synthetase [Geobacter uraniireducens Rf4] gi|146398338|gb|ABQ26971.1| prolyl-tRNA synthetase [Geobacter uraniireducens Rf4] Length = 585 Score = 252 bits (644), Expect = 7e-65, Method: Composition-based stats. Identities = 128/267 (47%), Positives = 177/267 (66%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+P ++E P DAE+ SH+LMLR GMI + + G+Y++LPLG +++ V I+REE Sbjct: 15 MRYSQYFIPTVKETPSDAEVISHQLMLRAGMIRKLAAGVYNYLPLGLRSIRKVENIVREE 74 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +PT+Q A+LW ESGR++ YGKE+LR DR D GPTHEEV+TD+ R Sbjct: 75 MNRAGAIELLMPTVQPAELWQESGRWEQYGKELLRFKDRKDTEFCMGPTHEEVITDLVRR 134 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ + + SY+KM+ + Sbjct: 135 EVKSYRQLPINLYQIQGKFRDEIRPRFGLMRGREFIMKDAYSFDVNEKAADISYDKMYQA 194 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GL+ + A++G IGG SHEF+VLA++GE + D+ E + Sbjct: 195 YRRIFERCGLRFRAVEADTGSIGGSYSHEFMVLAESGEDAIVSCTAC-DYAANVEKAEAR 253 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + + A E++ Sbjct: 254 QSGAADHAEPRTLEKVATPDKKSIEEV 280 Score = 189 bits (481), Expect = 6e-46, Method: Composition-based stats. Identities = 80/187 (42%), Positives = 113/187 (60%), Gaps = 3/187 (1%) Query: 256 YAATSDVHNEKLFDSLPENK---RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 ++ +D+ N L D P RGIEVGH+F GTKYS M AT+ ADGK+ + Sbjct: 390 VSSFADIRNVVLGDPCPRCDSGTLEMWRGIEVGHVFKLGTKYSKAMKATYLDADGKEQII 449 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R VAA IE +HD GII+P +APF + + ++ RD+ E IYA+L Sbjct: 450 FMGCYGIGIGRTVAACIEQNHDDNGIIFPLPIAPFHCIISALNMKEEPVRDSSEAIYAQL 509 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 + G +V DD E+ G +F ADL+G PL+++VGSK ++D KVE+K+R TG E +S+ Sbjct: 510 AAAGVEVLLDDRDERPGFKFKDADLIGIPLRIVVGSKNLADGKVELKNRKTGDVELLSIA 569 Query: 433 EVINYAS 439 + + Sbjct: 570 DAVEKVK 576 >gi|21283355|ref|NP_646443.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2] gi|49483925|ref|YP_041149.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252] gi|49486509|ref|YP_043730.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476] gi|57650554|ref|YP_186567.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL] gi|87161367|ref|YP_494324.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|148268163|ref|YP_001247106.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9] gi|150394230|ref|YP_001316905.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1] gi|151221788|ref|YP_001332610.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. Newman] gi|161509896|ref|YP_001575555.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142567|ref|ZP_03567060.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253317174|ref|ZP_04840387.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253732334|ref|ZP_04866499.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253734533|ref|ZP_04868698.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130] gi|257425798|ref|ZP_05602222.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053] gi|257428464|ref|ZP_05604862.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322] gi|257431098|ref|ZP_05607475.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus 68-397] gi|257433781|ref|ZP_05610139.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus E1410] gi|257436697|ref|ZP_05612741.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876] gi|257794068|ref|ZP_05643047.1| threonyl-tRNA synthetase [Staphylococcus aureus A9781] gi|258415772|ref|ZP_05682043.1| threonyl-tRNA synthetase [Staphylococcus aureus A9763] gi|258421991|ref|ZP_05684911.1| threonyl-tRNA synthetase [Staphylococcus aureus A9719] gi|258424099|ref|ZP_05686981.1| threonyl-tRNA synthetase [Staphylococcus aureus A9635] gi|258438251|ref|ZP_05689535.1| threonyl-tRNA synthetase [Staphylococcus aureus A9299] gi|258443709|ref|ZP_05692048.1| threonyl-tRNA synthetase [Staphylococcus aureus A8115] gi|258445920|ref|ZP_05694096.1| threonyl-tRNA synthetase [Staphylococcus aureus A6300] gi|258448399|ref|ZP_05696516.1| threonyl-tRNA synthetase [Staphylococcus aureus A6224] gi|258451803|ref|ZP_05699825.1| threonyl-tRNA synthetase [Staphylococcus aureus A5948] gi|258454120|ref|ZP_05702091.1| threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase [Staphylococcus aureus A5937] gi|269203301|ref|YP_003282570.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98] gi|282893178|ref|ZP_06301412.1| threonyl-tRNA synthetase [Staphylococcus aureus A8117] gi|282904254|ref|ZP_06312142.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus C160] gi|282908994|ref|ZP_06316812.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911310|ref|ZP_06319112.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WBG10049] gi|282914479|ref|ZP_06322265.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus M899] gi|282919448|ref|ZP_06327183.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427] gi|282920223|ref|ZP_06327948.1| threonyl-tRNA synthetase [Staphylococcus aureus A9765] gi|282924825|ref|ZP_06332491.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101] gi|282927813|ref|ZP_06335424.1| threonyl-tRNA synthetase [Staphylococcus aureus A10102] gi|283958434|ref|ZP_06375885.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus A017934/97] gi|284024731|ref|ZP_06379129.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132] gi|293503557|ref|ZP_06667404.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424] gi|293510572|ref|ZP_06669277.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809] gi|293537114|ref|ZP_06671794.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015] gi|294848704|ref|ZP_06789450.1| threonyl-tRNA synthetase [Staphylococcus aureus A9754] gi|295405993|ref|ZP_06815801.1| threonyl-tRNA synthetase [Staphylococcus aureus A8819] gi|295428254|ref|ZP_06820883.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|296274890|ref|ZP_06857397.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1] gi|297207604|ref|ZP_06924039.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297245081|ref|ZP_06928958.1| threonyl-tRNA synthetase [Staphylococcus aureus A8796] gi|297590783|ref|ZP_06949421.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8] gi|300911686|ref|ZP_07129130.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70] gi|304380726|ref|ZP_07363395.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|38258392|sp|Q8NW68|SYT_STAAW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56749381|sp|Q6G8P3|SYT_STAAS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56749410|sp|Q6GG23|SYT_STAAR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|71153575|sp|Q5HF90|SYT_STAAC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123735974|sp|Q2FG54|SYT_STAA3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|172048941|sp|A6QHL6|SYT_STAAE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189083625|sp|A6U2F0|SYT_STAA2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189083626|sp|A5ITK7|SYT_STAA9 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189083627|sp|A8Z2J8|SYT_STAAT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|38492559|pdb|1NYQ|A Chain A, Structure Of Staphylococcus Aureus Threonyl-Trna Synthetase Complexed With An Analogue Of Threonyl Adenylate gi|38492560|pdb|1NYQ|B Chain B, Structure Of Staphylococcus Aureus Threonyl-Trna Synthetase Complexed With An Analogue Of Threonyl Adenylate gi|38492561|pdb|1NYR|A Chain A, Structure Of Staphylococcus Aureus Threonyl-Trna Synthetase Complexed With Atp gi|38492562|pdb|1NYR|B Chain B, Structure Of Staphylococcus Aureus Threonyl-Trna Synthetase Complexed With Atp gi|21204795|dbj|BAB95491.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus MW2] gi|49242054|emb|CAG40753.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252] gi|49244952|emb|CAG43413.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476] gi|57284740|gb|AAW36834.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL] gi|87127341|gb|ABD21855.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|147741232|gb|ABQ49530.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Staphylococcus aureus subsp. aureus JH9] gi|149946682|gb|ABR52618.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1] gi|150374588|dbj|BAF67848.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. Newman] gi|160368705|gb|ABX29676.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253723934|gb|EES92663.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253727474|gb|EES96203.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130] gi|257271492|gb|EEV03638.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053] gi|257275305|gb|EEV06792.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322] gi|257278046|gb|EEV08694.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus 68-397] gi|257281874|gb|EEV12011.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus E1410] gi|257284048|gb|EEV14171.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876] gi|257788040|gb|EEV26380.1| threonyl-tRNA synthetase [Staphylococcus aureus A9781] gi|257839365|gb|EEV63838.1| threonyl-tRNA synthetase [Staphylococcus aureus A9763] gi|257842035|gb|EEV66464.1| threonyl-tRNA synthetase [Staphylococcus aureus A9719] gi|257845720|gb|EEV69752.1| threonyl-tRNA synthetase [Staphylococcus aureus A9635] gi|257848295|gb|EEV72286.1| threonyl-tRNA synthetase [Staphylococcus aureus A9299] gi|257851115|gb|EEV75058.1| threonyl-tRNA synthetase [Staphylococcus aureus A8115] gi|257855162|gb|EEV78101.1| threonyl-tRNA synthetase [Staphylococcus aureus A6300] gi|257858367|gb|EEV81252.1| threonyl-tRNA synthetase [Staphylococcus aureus A6224] gi|257860515|gb|EEV83341.1| threonyl-tRNA synthetase [Staphylococcus aureus A5948] gi|257863572|gb|EEV86329.1| threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase [Staphylococcus aureus A5937] gi|262075591|gb|ACY11564.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98] gi|269941163|emb|CBI49550.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20] gi|282313191|gb|EFB43587.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101] gi|282317258|gb|EFB47632.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427] gi|282321660|gb|EFB51985.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus M899] gi|282325005|gb|EFB55315.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WBG10049] gi|282327258|gb|EFB57553.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282590323|gb|EFB95402.1| threonyl-tRNA synthetase [Staphylococcus aureus A10102] gi|282594571|gb|EFB99556.1| threonyl-tRNA synthetase [Staphylococcus aureus A9765] gi|282595872|gb|EFC00836.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus C160] gi|282764496|gb|EFC04622.1| threonyl-tRNA synthetase [Staphylococcus aureus A8117] gi|283790583|gb|EFC29400.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus A017934/97] gi|285817366|gb|ADC37853.1| Threonyl-tRNA synthetase [Staphylococcus aureus 04-02981] gi|290919959|gb|EFD97027.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015] gi|291095223|gb|EFE25488.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424] gi|291466463|gb|EFF08984.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809] gi|294824730|gb|EFG41153.1| threonyl-tRNA synthetase [Staphylococcus aureus A9754] gi|294968990|gb|EFG45011.1| threonyl-tRNA synthetase [Staphylococcus aureus A8819] gi|295127654|gb|EFG57291.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|296887621|gb|EFH26519.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297178161|gb|EFH37409.1| threonyl-tRNA synthetase [Staphylococcus aureus A8796] gi|297575669|gb|EFH94385.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8] gi|300887107|gb|EFK82308.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70] gi|302333348|gb|ADL23541.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus JKD6159] gi|302751509|gb|ADL65686.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340725|gb|EFM06656.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312437859|gb|ADQ76930.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60] gi|312830061|emb|CBX34903.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315130684|gb|EFT86670.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus CGS03] gi|315195587|gb|EFU25974.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus CGS00] gi|315198621|gb|EFU28949.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus CGS01] gi|320140439|gb|EFW32293.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA131] gi|320143977|gb|EFW35746.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA177] gi|329314355|gb|AEB88768.1| Threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131] gi|329727674|gb|EGG64130.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172] Length = 645 Score = 252 bits (644), Expect = 7e-65, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 161/445 (36%), Gaps = 33/445 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD +L L T G+ WLP G + I +++ Sbjct: 229 KAHLQMLEERKERDHRKIGKELELFTN-SQLVGAGLPLWLPNGATIRREIERYIVDKEVS 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHI 122 G + P L + DL+ SG +D Y ++M ++ M+ P + I+ + Sbjct: 288 MGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPMNCPHHMMIYANKP 347 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ R E ++ + + + P+ K + ++ + Sbjct: 348 HSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMII 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDD 241 ++ G + R D + + + D + D+ Sbjct: 408 DVYKDFGFEDYSFRLS--------------YRDPEDKEKYFDDDDMWNKAENMLKEAADE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y DV ++ ++ + + +S ++ F ++ T Sbjct: 454 LGLSYEEAIGEAAFYGPKLDV---QVKTAMGKEETLSTAQLD----FLLPERFD----LT 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + G DG+ H + G + + + + +P +AP ++ +I + + Sbjct: 503 YIGQDGEHHRPVVIHR--GVVSTMERFVAFLTEETKGAFPTWLAPKQVQIIPVNV--DLH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ L G V DD E++G + A + P Q++VG K V +++V ++ Sbjct: 559 YDYARQLQDELKSQGVRVSIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRQY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + +E + +E I + Sbjct: 619 GSQDQETVEKDEFIWNLVDEIRLKK 643 >gi|315126673|ref|YP_004068676.1| prolyl-tRNA synthetase [Pseudoalteromonas sp. SM9913] gi|315015187|gb|ADT68525.1| prolyl-tRNA synthetase [Pseudoalteromonas sp. SM9913] Length = 574 Score = 252 bits (644), Expect = 7e-65, Method: Composition-based stats. Identities = 132/294 (44%), Positives = 172/294 (58%), Gaps = 2/294 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAEI SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYILATLKETPSDAEIVSHQLMLRAGMIRRVASGLYTWLPSGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GAIEM +P +Q ADLW ESGR+ +G E++R DR+++ GPTHEEV+TD R Sbjct: 61 MDKAGAIEMLMPVIQPADLWEESGRWSEFGPELMRFTDRHNREFAMGPTHEEVITDFVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP T YQ+Q K RDE RPRFGVMR+REF MKDAYSF LT E +Y M + Sbjct: 121 EINSYKQLPITLYQVQTKVRDERRPRFGVMRAREFTMKDAYSFHLTDECLDATYQVMHKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD-F 239 Y IF RLGL P+ A++G IGG +SHEF VLA++GE + S D+ E + Sbjct: 181 YCNIFERLGLDFRPVIADTGSIGGSVSHEFHVLAESGEDAIAFSD-ASDYAANIEKAEAL 239 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 S ++ A + NE + R I G G + Sbjct: 240 APTESRPQASKELKAFPTPDAKTINELKKHYGVKPHRGVKTLIVYGAPDEDGKR 293 Score = 171 bits (434), Expect = 2e-40, Method: Composition-based stats. Identities = 67/189 (35%), Positives = 101/189 (53%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D + RGIEVGHIF GTKYS M A GK+ + MG Sbjct: 385 EVADIRNIVEGDPSPCGQGTLQIKRGIEVGHIFQLGTKYSEAMKAGVLSESGKNQTMTMG 444 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSK 374 YGIG RVVAA IE ++D GI WP ++APF ++++ + D +Y L Sbjct: 445 CYGIGVSRVVAAAIEQNNDQYGITWPKAIAPFDLAIVPMNMHKSHRIPDIANNLYQGLKD 504 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV +DD E+ G F +LLG P +++G + + ++KVE+K+R TG + + ++ Sbjct: 505 AGLDVLFDDRKERPGVMFNDMELLGVPYTLVIGERNLDENKVELKNRRTGEKLMIDIDSA 564 Query: 435 INYASHRFS 443 I ++F+ Sbjct: 565 IETIKNQFN 573 >gi|88195489|ref|YP_500293.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|123003455|sp|Q2FXP7|SYT_STAA8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|87203047|gb|ABD30857.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|329728437|gb|EGG64874.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189] Length = 645 Score = 252 bits (644), Expect = 7e-65, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 161/445 (36%), Gaps = 33/445 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD +L L T G+ WLP G + I +++ Sbjct: 229 KAHLQMLEERKERDHRKIGKELELFTN-SQLVGAGLPLWLPNGATIRREIERYIVDKEVS 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHI 122 G + P L + DL+ SG +D Y ++M ++ M+ P + I+ + Sbjct: 288 MGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPMNCPHHMMIYANKP 347 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ R E ++ + + + P+ K + ++ + Sbjct: 348 HSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMII 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDD 241 ++ G + R D + + + D + D+ Sbjct: 408 DVYKDFGFEDYSFRLS--------------YRDPEDKEKYFDDDDMWNKAENMLKEAADE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y DV ++ ++ + + +S ++ F ++ T Sbjct: 454 LGLSYEEAIGEAAFYGPKLDV---QVKTAMGKEETLSTAQLD----FLLPERFD----LT 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + G DG+ H + G + + + + +P +AP ++ +I + + Sbjct: 503 YIGQDGEHHRPVVIHR--GVVSTMERFVAFLTEETKGAFPTWLAPKQVQIIPVNV--DLH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ L G V DD E++G + A + P Q++VG K V +++V ++ Sbjct: 559 YDYARQLQDELKSQGVRVSIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRQY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + +E + +E I + Sbjct: 619 GSQDQETVEKDEFIWNLVDEIRLKK 643 >gi|289661762|ref|ZP_06483343.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 636 Score = 252 bits (644), Expect = 8e-65, Method: Composition-based stats. Identities = 73/438 (16%), Positives = 139/438 (31%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + + RD L + + + G+ W P G V +R+ +G Sbjct: 234 YILRMEEADKRDHRRIGRAQDLF--HLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSG 291 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D+Y M + + P + +F + SY Sbjct: 292 YGEVRCPQILDVSLWQKSGHWDNYQDAMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSY 350 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F L + L + Sbjct: 351 RDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCL-ESQIESEVTAFHQQALAV 409 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P D + + Sbjct: 410 YTAFGFDDIQIKIALRPEKR-----------------LGDDATWDKAEAALRSALGVCGV 452 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + H L D++ ++ ++ G A + Sbjct: 453 EWQELPGEGAFYGPKIEYH---LKDAIGRTWQLGTMQVDFMMPGRLG--------AEYVD 501 Query: 305 AD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + K H V + +G+M ++ H G W V +++ + Sbjct: 502 ENSQKKHPVMLHRAIVGSMERFIGILIEHHAGAFPSWLAPVQVVVVNIT------DAQAE 555 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L+ G V D E+IG + L P ++VG + + V ++ R Sbjct: 556 YVDSVRKTLANQGFRVSADLRNEKIGYKIREHTLQRVPYLLVVGDREKENGAVAVRTRSG 615 Query: 424 GIREDMSLEEVINYASHR 441 M++ I Sbjct: 616 EDLGTMTVSAFIERLQAE 633 >gi|322420273|ref|YP_004199496.1| prolyl-tRNA synthetase [Geobacter sp. M18] gi|320126660|gb|ADW14220.1| prolyl-tRNA synthetase [Geobacter sp. M18] Length = 573 Score = 252 bits (644), Expect = 8e-65, Method: Composition-based stats. Identities = 133/282 (47%), Positives = 179/282 (63%), Gaps = 1/282 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+P ++E P DAE+ SHKLMLR GMI + + GIY++LPLG +++ V I+REE Sbjct: 1 MRYSQYFIPTVKETPSDAEVISHKLMLRAGMIRKLAAGIYNYLPLGLRSIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR+D YGKE+LR DR D GPTHEEV+TD+ R Sbjct: 61 MNRAGAIELLMPAVQPAELWKESGRWDFYGKELLRFKDRKDAEFCMGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR +P YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ G+ SY KM+ + Sbjct: 121 EIRSYRQMPINLYQIQGKFRDEIRPRFGLMRGREFIMKDAYSFDVNEAGADVSYEKMYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK + A++G IGG+ SHEF+VLAD+GE + ++ E + Sbjct: 181 YRRIFERCGLKFRAVEADTGTIGGNYSHEFMVLADSGEDAIVSCSCC-EYAANMEKAETK 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 ++ + A E + L N + + Sbjct: 240 RSEAVEHADPRPMEHVATPGQKSIEDVSAFLGVNNTQVVKTL 281 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 74/175 (42%), Positives = 107/175 (61%), Gaps = 3/175 (1%) Query: 260 SDVHNEKLFDSLPEN---KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 D+ N + D+ P K RGIEVGH+F GTKYS ++A+F A+GK+ + MG Sbjct: 382 VDIRNVVIGDACPRCESGKLEIWRGIEVGHVFKLGTKYSKALNASFLDANGKEQIIFMGC 441 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R VAA IE +HD GII+P +APF + + A + + A E+IY+ L + G Sbjct: 442 YGIGIGRTVAACIEQNHDENGIIFPIPIAPFHCIVSALSAKEDEVKAASEQIYSELLEAG 501 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 +V DD E+ G +F ADL+G PL+++VG+K + D KVE+K R +G E + + Sbjct: 502 VEVLLDDRDERPGFKFKDADLIGIPLRLVVGAKNLVDGKVELKERRSGEVEILPI 556 >gi|295706837|ref|YP_003599912.1| threonyl-tRNA synthetase [Bacillus megaterium DSM 319] gi|294804496|gb|ADF41562.1| threonyl-tRNA synthetase [Bacillus megaterium DSM 319] Length = 645 Score = 252 bits (644), Expect = 8e-65, Method: Composition-based stats. Identities = 78/438 (17%), Positives = 154/438 (35%), Gaps = 36/438 (8%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L T + +G+ WLP G + I +++ G Sbjct: 237 LRLLEEAKERDHRKLGKELNLFTN-SQKVGQGLPLWLPKGATIRRIIERYIVDKEVSLGY 295 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG ++ Y +M + +++ ++ P + +++ I SYR Sbjct: 296 QHVYTPVLGSVELYKTSGHWEHYQDDMFPAMEMDNEDLVLRPMNCPHHMMVYKQGIHSYR 355 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K + ++ ++ Sbjct: 356 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEEFIRVVRLVEAVYK 415 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIISL 245 G ++ R D +T+ + D M S D++ Sbjct: 416 DFGFENYSFRLS--------------YRDPADTEKYFDDDAMWEKAQSMLKDAMDELDLD 461 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y DV ++ +L + + +S ++ F ++ T+ G Sbjct: 462 YYEAEGEAAFYGPKLDV---QVKTALGKEETLSTVQLD----FLLPERFD----LTYVGE 510 Query: 306 DGKDHYVQMGSYGIG--AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DGK H + G+ R VA +IE + Sbjct: 511 DGKQHRPVVIHRGVVSTMERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPTV------HLQ 564 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L G V D E+IG + A + P ++VG K V D V ++ Sbjct: 565 YAKEVQEQLQLAGIRVELDSRDEKIGYKIREAQMQKIPYMLVVGDKEVEDKAVNVRKYGE 624 Query: 424 GIREDMSLEEVINYASHR 441 E + + + Sbjct: 625 QNSETVDFQAFLQNVKAE 642 >gi|284006267|emb|CBA71503.1| threonyl-tRNA synthetase [Arsenophonus nasoniae] Length = 640 Score = 252 bits (644), Expect = 8e-65, Method: Composition-based stats. Identities = 76/443 (17%), Positives = 141/443 (31%), Gaps = 42/443 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + RD +L L + + + G+ W G + IR + N Sbjct: 232 YLLRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMAFWHNDGWVIFRELETFIRTKLNEYR 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y + M ++ P + IF +KSY Sbjct: 290 YQEVKGPLMMDRILWEKTGHWENYKENMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQILTE-VKSCIKMIYHV 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P + D DI Sbjct: 408 YATFGFEKIAVKLSTRPEKR-----------------IGTDAQWDRAESDLAKALGDIEF 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y + L+D L + ++ G A++ Sbjct: 451 DYQPGEG--AFYGPKIEF---TLYDCLDRAWQCGTVQLDFSLPSRLG--------ASYVD 497 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + V + +G++ ++ + G W + I++ D Sbjct: 498 ENNERQVPVMIHRAVLGSLERFIGILTEQYAGFFPTWLAPLQIVIINIT------DAQAD 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +K+ +LS G V D E+IG + L P ++ G K V ++V ++ R Sbjct: 552 FVQKVVKKLSNFGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESNQVSVRTRDG 611 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 + E R Sbjct: 612 KDLGTFDVTEFAERVLDEIRTRR 634 >gi|282906079|ref|ZP_06313934.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260] gi|282331371|gb|EFB60885.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260] Length = 645 Score = 252 bits (644), Expect = 8e-65, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 161/445 (36%), Gaps = 33/445 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD +L L T G+ WLP G + I +++ Sbjct: 229 KAHLQMLEERKERDHRKIGKELELFTN-SQLVGAGLPLWLPNGATIRREIERYIVDKEVS 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHI 122 G + P L + DL+ SG +D Y ++M ++ M+ P + I+ + Sbjct: 288 MGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPMNCPHHMMIYANKP 347 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ R E ++ + + + P+ K + ++ + Sbjct: 348 HSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMII 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDD 241 ++ G + R D + + + D + D+ Sbjct: 408 DVYKDFGFEDYSFRLS--------------YRDPEDKEKYFDDDDMWNKAENMLKEAADE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y DV ++ ++ + + +S ++ F ++ T Sbjct: 454 LGLSYEEAIGEAAFYGPKLDV---QVKTAMGKEETLSTAQLD----FLLPERFD----LT 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + G DG+ H + G + + + + +P +AP ++ +I + + Sbjct: 503 YIGQDGEHHRPVVIHR--GVVSTMERFVAFLTEETKGAFPTWLAPKQVQIIPVNV--DLH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ L G V DD E++G + A + P Q++VG K V +++V ++ Sbjct: 559 YDYARQLQDELKSQGVRVSIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRQY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + +E + +E I + Sbjct: 619 GSQDQETVEKDEFIWNLVDEIRLKK 643 >gi|83647457|ref|YP_435892.1| prolyl-tRNA synthetase [Hahella chejuensis KCTC 2396] gi|114152199|sp|Q2SD07|SYP_HAHCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|83635500|gb|ABC31467.1| prolyl-tRNA synthetase [Hahella chejuensis KCTC 2396] Length = 574 Score = 252 bits (644), Expect = 8e-65, Method: Composition-based stats. Identities = 123/237 (51%), Positives = 167/237 (70%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y + L+E P DAE+ SH+LMLR GMI + + G+Y+WLPLG + L V I+REE Sbjct: 1 MRASRYLIATLKETPADAEVISHQLMLRAGMIRKLAAGLYTWLPLGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ +P +Q A+LW+ESGR++ YG E+LR+ DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MDRSGAQEVLMPAVQPAELWIESGRWEQYGGELLRIHDRHNRDFCVGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ+KFRDE RPRFG+MR+REFLMKDAYSF + E +Y M+ + Sbjct: 121 ELKSYKQLPANFYQIQMKFRDERRPRFGIMRAREFLMKDAYSFHVNQESLDETYMVMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R GL P++A+SG IGG SHEF VLA++GE + D+ E Sbjct: 181 YTRIFTRFGLDFRPVQADSGSIGGSSSHEFHVLANSGEDLIAF-STESDYAANLEKA 236 Score = 181 bits (460), Expect = 2e-43, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 113/197 (57%), Gaps = 3/197 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 T+D+ N D P+ K V +GIEVGH+F G KYS M+AT +GK Sbjct: 378 GRDCEIKETADLRNVVEGDLSPDGKGVLVLKKGIEVGHVFKLGDKYSSAMNATVLDENGK 437 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEK 367 +QMG YGIG RVVAA IE HD KGIIWPD++APF+++L+ + V R+ E Sbjct: 438 ATVMQMGCYGIGVSRVVAAAIEQGHDDKGIIWPDALAPFEVALVPLNMHKSDVVREKAES 497 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +YA L + G DV DD E+ G +FA +L+G P +V++ + +++ KVE K R Sbjct: 498 LYAELLQAGVDVLLDDRNERPGVKFAEMELIGIPHRVVISDRGLAEGKVEYKGRRDTDST 557 Query: 428 DMSLEEVINYASHRFSN 444 DM+++ V+N+ + Sbjct: 558 DMTVDTVVNFIKEKLKK 574 >gi|292491210|ref|YP_003526649.1| prolyl-tRNA synthetase [Nitrosococcus halophilus Nc4] gi|291579805|gb|ADE14262.1| prolyl-tRNA synthetase [Nitrosococcus halophilus Nc4] Length = 575 Score = 252 bits (644), Expect = 8e-65, Method: Composition-based stats. Identities = 120/231 (51%), Positives = 160/231 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAEI SH+LMLR G I + + G+Y+WLPLG + L V IIREE Sbjct: 1 MRTSQYLLTTTRETPADAEIISHQLMLRGGFIRRLAAGLYTWLPLGLRVLRKVEGIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+ +P +Q A+LW E+GR++ YG E+LR DR+ + +GPTHEEV+TD+ R Sbjct: 61 MDKAGAQEILMPAVQPAELWQETGRWEQYGPELLRFTDRHQRPFCFGPTHEEVITDLIRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ+KFRDE+RPRFGVMR+REFLMKDAYSF L + +Y +M+ + Sbjct: 121 EIRSYKQLPANFYQIQVKFRDEIRPRFGVMRAREFLMKDAYSFHLDQTSLEQTYQQMYET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 Y RIF R+GL ++A++G IGG SHEF VLA +GE + S Sbjct: 181 YSRIFERIGLTFRAVQADTGAIGGQTSHEFHVLAASGEDAIAFSDKGTYAA 231 Score = 163 bits (413), Expect = 5e-38, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 103/196 (52%), Gaps = 3/196 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P T+D+ D P+ + ARGIEVGHIF G KYS M+ T G+ + Sbjct: 377 PEPITADIRKVVDGDPSPDGEGFLSIARGIEVGHIFQLGEKYSQAMNTTVLDETGQAIIL 436 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG RVVAA IE +HD GIIWPD +APF+++L+ I AH V R+ +++Y++ Sbjct: 437 TMGCYGIGVSRVVAAAIEQNHDEHGIIWPDPIAPFQLALVPINAHKSVRVRETADQLYSQ 496 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G +V DD + G F DL+G P ++++ + + VE K R G + L Sbjct: 497 LQAAGFEVLLDDRQLRPGVIFTDMDLIGIPHRLVISDRGLDAGTVEYKRRRDGKTSTIQL 556 Query: 432 EEVINYASHRFSNNRP 447 + +I P Sbjct: 557 DNLIPGLKSELKTPIP 572 >gi|300023294|ref|YP_003755905.1| threonyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888] gi|299525115|gb|ADJ23584.1| threonyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888] Length = 650 Score = 252 bits (644), Expect = 8e-65, Method: Composition-based stats. Identities = 74/440 (16%), Positives = 153/440 (34%), Gaps = 34/440 (7%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L L+E RD ++ L + + G W G + A +R +Q R Sbjct: 232 KAYLHQLEEAEKRDHRKLGREMDLF--HFQEEAPGSVFWHAKGWTLFQTLIAYMRRQQQR 289 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E++ P + W SG +++YG+ M +++ P + I+++ +K Sbjct: 290 AGYEEVNSPDMMEKHFWELSGHWENYGENMFTTVLPDERVFCCKPMNCPGHVQIYKNGLK 349 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP+ + R E G++R R F DA+ F + + L Sbjct: 350 SYRDLPYRIAEFGKVHRYEPSGALHGMLRVRHFTQDDAHIFLTEDQIMEECLKIN-DLML 408 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 I+ G + I ++ + P + E A+ V E + Sbjct: 409 SIYKDFGFEEIVIKLSTRPEKRVGADELWDKAEKALGDVL-----------DEVKRRSNG 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + I A Y + L D++ + + ++ G A + Sbjct: 458 LIKTEIQPGEGAFYGPKLEY---VLKDAIGRDWQCGTTQVDFNLAGRLG--------AFY 506 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + + G++ ++ + G +W + ++ Sbjct: 507 IDEHSEKKTPVMVHRAMFGSLERFTGILIENFAGHFPLWLAPLQIVVAPIV------SDA 560 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ + +G V D E+I + L P+ ++VG + + KV ++ Sbjct: 561 NDYANEVAQKAKALGLRVETDLRNEKINYKVREHSLAKVPVLLVVGKREAEERKVSVRRL 620 Query: 422 LTGIREDMSLEEVINYASHR 441 + + MSL++ + + Sbjct: 621 GSQDQTVMSLDDALKSLAAE 640 >gi|261493242|ref|ZP_05989769.1| threonine--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496515|ref|ZP_05992895.1| threonine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307718|gb|EEY09041.1| threonine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311092|gb|EEY12268.1| threonine--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 643 Score = 252 bits (644), Expect = 8e-65, Method: Composition-based stats. Identities = 70/445 (15%), Positives = 143/445 (32%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LAEYLQRLEEAAKRDHRRIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + LW ++G + +Y +++ ++ P + IF + Sbjct: 287 EYDYQEVKGPFMMDRVLWEKTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T E + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEEQIESEVTSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G +I ++ + P D + Sbjct: 405 YDIYSTFGFTNIAVKLSTRPENR-----------------IGDDAMWDRAEEGLANALRN 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L D L + ++ A+ Sbjct: 448 NGLEYEIQEGEGAFYGPKIEF---ALRDCLGREWQCGTVQLDFALPGRL--------EAS 496 Query: 302 FKGA-DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +G+ V + +G++ +I + G W +++ Sbjct: 497 YVAEDNGRRTPVMIHRAILGSIERFIGIITEEYAGFFPTWLAPTQAVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +++ +LS G V D E++G + L P ++ G K +++ KV ++ Sbjct: 551 QADYVQQVVKQLSDAGIRVKADLRNEKVGFKVREHTLRRVPYMLVCGDKEIAEGKVSVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R + +++ ++ Sbjct: 611 RKGADLGTYLVSDLVEILKNQIKAR 635 >gi|301794619|emb|CBW37067.1| threonyl-tRNA synthetase [Streptococcus pneumoniae INV104] Length = 647 Score = 252 bits (644), Expect = 8e-65, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 156/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I ++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVNKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYEDFNLTDYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QIKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG+DH M G+ + I + + + I ++ Sbjct: 503 YIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +S++ + +N Sbjct: 619 GQKETQTVSVDNFVQAILADIANK 642 >gi|260582696|ref|ZP_05850484.1| threonyl-tRNA synthetase [Haemophilus influenzae NT127] gi|260094262|gb|EEW78162.1| threonyl-tRNA synthetase [Haemophilus influenzae NT127] Length = 643 Score = 252 bits (644), Expect = 8e-65, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 144/445 (32%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LAEYLTRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + LW ++G + +Y +++ ++ P + IF + Sbjct: 287 QYDYQEVKGPFMMDRVLWEKTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G +I ++ + P S E D Sbjct: 405 YDIYSTFGFTNIAVKLSTRPENRIGSDE-----------------MWDRAEAGLAAALAH 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L D L + ++ AT Sbjct: 448 NGLEYEIQEGEGAFYGPKIEF---ALRDCLGREWQCGTVQLDFALPGRLD--------AT 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ +I + G W +++ Sbjct: 497 YVAEDNSRKTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPTQAVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ +LS VG V D E++G + L P ++ G K +++ KV ++ Sbjct: 551 QADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRVPYMLVCGDKEIAEGKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R ++EE ++ + Sbjct: 611 RKGADLGTFTVEEFAEILKNQVRSR 635 >gi|332686097|ref|YP_004455871.1| threonyl-tRNA synthetase [Melissococcus plutonius ATCC 35311] gi|332370106|dbj|BAK21062.1| threonyl-tRNA synthetase [Melissococcus plutonius ATCC 35311] Length = 647 Score = 252 bits (643), Expect = 8e-65, Method: Composition-based stats. Identities = 83/443 (18%), Positives = 163/443 (36%), Gaps = 34/443 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L MI + G+ WLP G + I +++ Sbjct: 232 FIKMQEEAKERDHRKLGKELDLF--MISQEVGSGLPFWLPKGATIRRTIERYITDKEISL 289 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + + DL+ SG + Y ++M D D M + P + +++ + Sbjct: 290 GYQHVYTPIMANVDLYKTSGHWAHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKDTVH 349 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + ++ L Sbjct: 350 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKEEFKRILELMLA 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ + R D + D M + D++ Sbjct: 410 VYKDFNITDYKFRLS--------------YRDPNNKDKYFDDDAMWTKAQTMLKGAMDEL 455 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ F ++ T+ Sbjct: 456 KLDYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTY 504 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++++ + + G + + + + +P +AP + ++I + Sbjct: 505 IGEDGENNHRPVVIHR-GIVSTMERFVSYLIEVYKGAFPLWLAPIQATIIPVSV--DAHS 561 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D + RL G + DD E++G + + P Q++VG K V DS V I+H Sbjct: 562 DYAYETKERLQMRGLRIEVDDRNEKMGYKIRASQTQKIPYQIVVGDKEVDDSTVTIRHYG 621 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + E M+L I+ SN Sbjct: 622 SKETEVMALNLFIDSLIAEISNY 644 >gi|307705352|ref|ZP_07642214.1| threonyl-tRNA synthetase [Streptococcus mitis SK597] gi|307621139|gb|EFO00214.1| threonyl-tRNA synthetase [Streptococcus mitis SK597] Length = 647 Score = 252 bits (643), Expect = 8e-65, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 157/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVDKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYGDFNLNEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QVKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + + + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + + +++ + +N Sbjct: 619 GQKETQTVLVDDFVQAILADIANK 642 >gi|239994929|ref|ZP_04715453.1| prolyl-tRNA synthetase [Alteromonas macleodii ATCC 27126] Length = 440 Score = 252 bits (643), Expect = 9e-65, Method: Composition-based stats. Identities = 122/235 (51%), Positives = 161/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L+ V I+REE Sbjct: 1 MRTSQYLLATQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPSGLRVLNKVANIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLW ESGR++ YG E+LR+ DR+ + + GPTHEEV+T + R+ Sbjct: 61 MNKAGAIEVLMPVVQPADLWEESGRWEEYGPELLRIKDRHQRDFVLGPTHEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ KFRDE+RPRFG+MR REF MKDAYSF L + +Y KM+ + Sbjct: 121 EISSYKQLPLNLYQIQTKFRDEVRPRFGIMRGREFTMKDAYSFHLEDSCLEETYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R+GL + A+SG IGG+ SHEF VLA +GE + S D D+ E Sbjct: 181 YCNIFSRMGLDFRAVIADSGSIGGNHSHEFHVLAASGEDDIAFSSD-SDYAANVE 234 Score = 42.0 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Query: 260 SDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 D+ N D+ P+ K RGIEVGHIF G+KYS M+ GK Sbjct: 388 VDIRNVVAGDASPDGKGTLDIKRGIEVGHIFQLGSKYSEAMNCGVLSESGKHQ 440 >gi|256819829|ref|YP_003141108.1| threonyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271] gi|256581412|gb|ACU92547.1| threonyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271] Length = 647 Score = 252 bits (643), Expect = 9e-65, Method: Composition-based stats. Identities = 82/437 (18%), Positives = 152/437 (34%), Gaps = 36/437 (8%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L T ++ +G+ WLP G + + A +R+ Q + G ++ P Sbjct: 237 AKKRDHRKLGKELELFT-FSNKVGQGLPLWLPKGAALRERLEAFLRKAQKQAGYEQVVTP 295 Query: 73 TLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 + +L+V SG +D YGK+ + + + P + +I+ SH SY++LP Sbjct: 296 HIGHKNLYVTSGHWDKYGKDSFQPIATPNEGEEYLLKPMNCPHHCEIYNSHPWSYKDLPK 355 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F + +R E G+ R R F DA+ F TPE + + L +F LG Sbjct: 356 RFAEFGTVYRYEQSGELHGLTRVRCFTQDDAHIFC-TPEQLDDEFKHVIDLVLYVFGSLG 414 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + T+ S + + + I Sbjct: 415 FDNFTAQVSLRD-------------PENPTKYIGSDENWAKAENAIINAAKEKGLSYVIE 461 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D + D+L + ++ ++ +KGAD + Sbjct: 462 TGEAAFYGPKLDFM---VKDALGRSWQLGTIQVDYNLP--------ERFDLWYKGADNEM 510 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 H + G+M A++ G +W S + + + + +K+ Sbjct: 511 HRPVMIHRAPFGSMERFVAILLEHTAGNFPLW------LNPSQAIVLSLSEKYENYAQKV 564 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 L D+ E +G + A+ P +IVG + V ++ R Sbjct: 565 LRLLENSDIRTLIDNRAETMGKKIREAETQKIPYMLIVGENEEKEGTVSVRKRGGEDLGS 624 Query: 429 MSLEEVINYASHRFSNN 445 MS+E + + + Sbjct: 625 MSVEAFAKLINDEVAKS 641 >gi|145636075|ref|ZP_01791745.1| threonyl-tRNA synthetase [Haemophilus influenzae PittHH] gi|229844174|ref|ZP_04464315.1| threonyl-tRNA synthetase [Haemophilus influenzae 6P18H1] gi|145270597|gb|EDK10530.1| threonyl-tRNA synthetase [Haemophilus influenzae PittHH] gi|229813168|gb|EEP48856.1| threonyl-tRNA synthetase [Haemophilus influenzae 6P18H1] Length = 643 Score = 252 bits (643), Expect = 9e-65, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 144/445 (32%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LAEYLTRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + LW ++G + +Y +++ ++ P + IF + Sbjct: 287 QYDYQEVKGPFMMDRVLWEKTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G +I ++ + P S E D Sbjct: 405 YDIYSTFGFTNIAVKLSTRPENRIGSDE-----------------MWDRAEAGLAAALAH 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L D L + ++ AT Sbjct: 448 NGLEYEIQEGEGAFYGPKIEF---ALRDCLGREWQCGTVQLDFALPGRLD--------AT 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ +I + G W +++ Sbjct: 497 YVAEDNSRKTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPTQAVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ +LS VG V D E++G + L P ++ G K +++ KV ++ Sbjct: 551 QADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRVPYMLVCGDKEIAEGKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R ++EE ++ + Sbjct: 611 RKGADLGTFTVEEFAEILKNQVRSR 635 >gi|226944147|ref|YP_002799220.1| threonyl-tRNA synthetase [Azotobacter vinelandii DJ] gi|259516344|sp|C1DF42|SYT_AZOVD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226719074|gb|ACO78245.1| threonyl-tRNA synthetase [Azotobacter vinelandii DJ] Length = 640 Score = 252 bits (643), Expect = 9e-65, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 146/442 (33%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R Q G Sbjct: 231 YIQRIEEAEKRDHRKLGKRLDLF--HTQEEAPGMVFWHPNGWTVYQVLEQYMRAVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG + +Y + M + + P + ++ +KSY Sbjct: 289 YLEIKTPQVVDRVLWEKSGHWANYAENMFT-TESESRDYAIKPMNCPCHVQVYNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+E G+MR R F DA+ F + S ++ Sbjct: 348 RELPLRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQMQAES-AAFIKLTRQV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E D + + Sbjct: 407 YADFGFQDIQLKLSTRPERRVGSGE-----------------LWDRAEEALAAALESAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ G A + Sbjct: 450 PYELQPGEGAFYGPKIEF---SLKDCLGRVWQCGTLQLDFNLPVRLG--------AEYVS 498 Query: 305 ADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + H V + +G+ ++ ++ +P +AP + ++NI + Sbjct: 499 ENNERQHPVMLHRAILGSFERFIGILIEHYE---GAFPAWLAPTQAVIMNITDK---QGE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L++ G D E+IG + LL P +++G + V V ++ R Sbjct: 553 FALEVERTLNQGGFRAKCDLRNEKIGFKIREHTLLKVPYLLVIGDREVETHSVAVRTREG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M +E+ + + Sbjct: 613 VDLGTMPVEQFREMLAQAVARR 634 >gi|167855812|ref|ZP_02478565.1| leucyl-tRNA synthetase [Haemophilus parasuis 29755] gi|167853091|gb|EDS24352.1| leucyl-tRNA synthetase [Haemophilus parasuis 29755] Length = 643 Score = 252 bits (643), Expect = 9e-65, Method: Composition-based stats. Identities = 72/441 (16%), Positives = 145/441 (32%), Gaps = 38/441 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD L L + + + G+ W G + +R + + Sbjct: 232 YLHRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYD 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G + +Y +++ ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWQNY-GDLMFTTQSENREYAIKPMNCPGHIQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + + I Sbjct: 349 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCMPEQVESE-VTSCIKMVYDI 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++I ++ + P + E A+ Sbjct: 408 YSTFGFENIQVKLSTRPANSIGTDEMWNKAEA-----------------DLAAALTANGL 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y + L D L + ++ F+ + S A Sbjct: 451 AFEIQEGEGAFYGPKIEF---ALRDCLDREWQCGTIQLD----FFLPERLSASYVAE--- 500 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + + V + +G++ +I + G W V +++ + Sbjct: 501 DNNRKTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPVQAVVMNIT------DSQAEY 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ +LS G V D E++G + L P ++ G K +++ KV ++ R Sbjct: 555 VQQVVKQLSDAGLRVKADLRNEKVGFKVREHTLRRVPYMLVCGDKEIAEGKVSVRTRKGA 614 Query: 425 IREDMSLEEVINYASHRFSNN 445 +EE + + Sbjct: 615 DLGTYKVEEFVEMLKKQVRGR 635 >gi|251781963|ref|YP_002996265.1| threonyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390592|dbj|BAH81051.1| threonyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323126789|gb|ADX24086.1| threonyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 647 Score = 252 bits (643), Expect = 9e-65, Method: Composition-based stats. Identities = 81/448 (18%), Positives = 157/448 (35%), Gaps = 36/448 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L L+E RD +L L MI + +G+ WLP G + I +++ Sbjct: 227 KAYLTRLEEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPDGATIRRTLERYITDKEL 284 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG ++ Y ++M + D D + + P + ++++H Sbjct: 285 ASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPVMDMGDGEEFVLRPMNCPHHIQVYKNH 344 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP ++ + R E G+ R RE + D + F + + + Sbjct: 345 VHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIRDE-FKRTLQL 403 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + ++ L R + D E + D Sbjct: 404 IIDVYEDFNLTDYRFRLS-----YRDPEDTHKYYDNDEM--------WENAQAMLKGAMD 450 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 451 DMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD----L 499 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + GADG++H M G+ + I + I ++ Sbjct: 500 KYIGADGEEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQV----TVIPISNEA 555 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ L G DD E++ + + P Q+IVG K + + V ++ Sbjct: 556 HIDYAWEVAKTLRDRGVRADVDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEEKSVNVRR 615 Query: 421 RLTGIREDMSLEEVINYASHRF-SNNRP 447 + S+E+ + +RP Sbjct: 616 YGSKATHTESVEDFVENILVDIARKSRP 643 >gi|240949517|ref|ZP_04753857.1| threonyl-tRNA synthetase [Actinobacillus minor NM305] gi|240296090|gb|EER46751.1| threonyl-tRNA synthetase [Actinobacillus minor NM305] Length = 643 Score = 252 bits (643), Expect = 9e-65, Method: Composition-based stats. Identities = 74/441 (16%), Positives = 141/441 (31%), Gaps = 38/441 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYD 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +G + +Y +++ ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWERTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F T E + I Sbjct: 349 RDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEEQIESEVTSCIKMVYDI 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++I ++ + P D + Sbjct: 408 YSTFGFENIAVKLSTRPENR-----------------IGDDAMWDRAEEGLANALRNNGL 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y + L D L + ++ F + A Sbjct: 451 EYEIQEGEGAFYGPKIEF---ALRDCLDREWQCGTVQLD----FALPGRLDASYVAE--- 500 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 +G+ V + +G++ +I + G W V +++ + Sbjct: 501 DNGRRTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPVQAVVMNIT------DSQAEY 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +K+ +LS G V D E++G + L P ++ G K +++ KV ++ R Sbjct: 555 VQKVVKQLSDAGLRVKADLRNEKVGFKVREHTLRRVPYMLVCGDKEIAEGKVSVRTRKGA 614 Query: 425 IREDMSLEEVINYASHRFSNN 445 +EE + + Sbjct: 615 DLGTYKVEEFVEILKSQVRGR 635 >gi|221194423|ref|ZP_03567480.1| threonyl-tRNA synthetase [Atopobium rimae ATCC 49626] gi|221185327|gb|EEE17717.1| threonyl-tRNA synthetase [Atopobium rimae ATCC 49626] Length = 588 Score = 252 bits (643), Expect = 1e-64, Method: Composition-based stats. Identities = 82/442 (18%), Positives = 152/442 (34%), Gaps = 44/442 (9%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD ++ L M+ G WLP G + + E + Sbjct: 185 LKMLEEAEKRDHRKIGREMELF--MMSDFGPGSPFWLPNGMAVRNALTDYWHEMMVKFNY 242 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + S LW SG +D Y + M +++ P + I+++ +SYR Sbjct: 243 EEVLTPQILSRSLWETSGHWDHYKENMYT-TSVDEEDFAIKPMNCPGACLIYKNRPRSYR 301 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + L R E++ G+ R REF DA+ F + ++ + + + Sbjct: 302 DLPLKLAEAGLDHRYEMKGALHGLFRVREFTQDDAHIFIRPDQITEQVADAS--HLITAY 359 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + + + P S E A+ G + + Sbjct: 360 YAQFGFPYRVELSTRPENSMGSDEDWERAEQG-----------------LKDALESMGID 402 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + E A Y D H L D L + + ++ F + + Sbjct: 403 YVLNEGDGAFYGPKIDFH---LTDCLGRSWQCGTIQLDFQLPHNF--------ELEYVDS 451 Query: 306 DG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG K + + G G+ ++ ++GK +W + + + R+ Sbjct: 452 DGTKKQPIMIHRAGFGSFDRFIGILTEHYEGKFPVWLAPCQVKVLPV------SEKSREY 505 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVA-DLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L G V D+ E+IG + A L P +I+G K V + ++ R + Sbjct: 506 AHEVAGALQAAGIRVKVDNRDEKIGYKIREARSLDRVPYMLIIGEKEVEAHNISVRDR-S 564 Query: 424 GIREDMSLEEVINYASHRFSNN 445 +L+ I S Sbjct: 565 NETVQSTLDAFIAKVSKENDER 586 >gi|165975675|ref|YP_001651268.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190149490|ref|YP_001968015.1| threonyl-tRNA synthetase ThrS [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303251658|ref|ZP_07337831.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307251749|ref|ZP_07533652.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307260677|ref|ZP_07542367.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307262809|ref|ZP_07544434.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|238687519|sp|B0BSM2|SYT_ACTPJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238692375|sp|B3H061|SYT_ACTP7 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|165875776|gb|ABY68824.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189914621|gb|ACE60873.1| threonyl-tRNA synthetase ThrS [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302649500|gb|EFL79683.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860750|gb|EFM92760.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306869598|gb|EFN01385.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306871824|gb|EFN03543.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 643 Score = 252 bits (643), Expect = 1e-64, Method: Composition-based stats. Identities = 70/445 (15%), Positives = 138/445 (31%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LAEYLTRLEEAAKRDHRRIGKALDLY--HMQEEAPGLVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + LW +G + +Y +++ ++ P + IF + Sbjct: 287 EYDYQEVKGPFMMDRVLWERTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIRMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G +I ++ + P D Sbjct: 405 YDIYSTFGFSNIQVKLSTRPENR-----------------IGDDAMWDRAEDGLAKALTA 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L D L + ++ A+ Sbjct: 448 NGLSYEIQEGEGAFYGPKIEF---ALRDCLDREWQCGTIQLDFALPGRLD--------AS 496 Query: 302 FKGA-DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +G+ V + +G++ +I + G W +++ Sbjct: 497 YVAEDNGRRTPVMIHRAILGSIERFIGIITEEYAGFFPTWLAPTQAVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ LS G D E++G + L P ++ G K + KV ++ Sbjct: 551 QADYVQKVTKALSDAGIRAKSDLRNEKVGFKVREHTLRRVPYMLVCGDKEIEAGKVSVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R +++E + ++ Sbjct: 611 RKGADLGTFTIDEFVEILKNQVKAR 635 >gi|309973051|gb|ADO96252.1| Threonyl-tRNA synthetase [Haemophilus influenzae R2846] Length = 643 Score = 252 bits (643), Expect = 1e-64, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 144/445 (32%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LAEYLTRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + LW ++G + +Y +++ ++ P + IF + Sbjct: 287 QYDYQEVKGPFMMDRVLWEKTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G +I ++ + P S E D Sbjct: 405 YDIYSTFGFTNIAVKLSTRPENRIGSDE-----------------MWDRAEAGLAAALAH 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L D L + ++ AT Sbjct: 448 NGLEYEIQEGEGAFYGPKIEF---ALRDCLGREWQCGTVQLDFALPGRLD--------AT 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ +I + G W +++ Sbjct: 497 YVAEDNSRKTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPTQAVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ +LS VG V D E++G + L P ++ G K +++ KV ++ Sbjct: 551 QADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRVPYMLVCGDKEIAEGKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R ++EE ++ + Sbjct: 611 RKGADLGTFTVEEFAEILKNQVRSR 635 >gi|229102972|ref|ZP_04233661.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-28] gi|228680387|gb|EEL34575.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-28] Length = 640 Score = 252 bits (643), Expect = 1e-64, Method: Composition-based stats. Identities = 72/444 (16%), Positives = 154/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ ++L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGNELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TPE + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMGQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + I + V Sbjct: 501 DEKNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHV 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 ++ +L++ G + D E++G + A + P +++G K + + V ++ Sbjct: 556 QYANEVADKLAQAGVRIERDMRDEKLGYKIREAQMQKIPYVLVIGDKEMENGSVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E ++L+ N + Sbjct: 616 EEKSEVVALDVFAASMEEEIKNRK 639 >gi|148994898|ref|ZP_01823919.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68] gi|148997679|ref|ZP_01825243.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70] gi|149006698|ref|ZP_01830384.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74] gi|149021279|ref|ZP_01835525.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72] gi|168483499|ref|ZP_02708451.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00] gi|168487280|ref|ZP_02711788.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00] gi|168488656|ref|ZP_02712855.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP195] gi|168491490|ref|ZP_02715633.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04] gi|168575182|ref|ZP_02721145.1| threonyl-tRNA synthetase [Streptococcus pneumoniae MLV-016] gi|169834472|ref|YP_001695022.1| threonyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6] gi|225859387|ref|YP_002740897.1| threonyl-tRNA synthetase [Streptococcus pneumoniae 70585] gi|225861459|ref|YP_002742968.1| threonyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14] gi|298229236|ref|ZP_06962917.1| threonyl-tRNA synthetase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254509|ref|ZP_06978095.1| threonyl-tRNA synthetase [Streptococcus pneumoniae str. Canada MDR_19A] gi|307068259|ref|YP_003877225.1| threonyl-tRNA synthetase [Streptococcus pneumoniae AP200] gi|307127841|ref|YP_003879872.1| threonyl-tRNA synthetase [Streptococcus pneumoniae 670-6B] gi|238688351|sp|B1I703|SYT_STRPI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783538|sp|C1C8M1|SYT_STRP7 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783543|sp|C1CSP6|SYT_STRZT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|147756178|gb|EDK63220.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70] gi|147761613|gb|EDK68577.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74] gi|147926966|gb|EDK78011.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68] gi|147930380|gb|EDK81364.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72] gi|168996974|gb|ACA37586.1| threonyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6] gi|172043101|gb|EDT51147.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00] gi|183569836|gb|EDT90364.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00] gi|183572780|gb|EDT93308.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP195] gi|183574162|gb|EDT94690.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04] gi|183578687|gb|EDT99215.1| threonyl-tRNA synthetase [Streptococcus pneumoniae MLV-016] gi|225720074|gb|ACO15928.1| threonyl-tRNA synthetase [Streptococcus pneumoniae 70585] gi|225727271|gb|ACO23122.1| threonyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14] gi|306409796|gb|ADM85223.1| Threonyl-tRNA synthetase [Streptococcus pneumoniae AP200] gi|306484903|gb|ADM91772.1| threonyl-tRNA synthetase [Streptococcus pneumoniae 670-6B] gi|327389816|gb|EGE88161.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA04375] gi|332072464|gb|EGI82947.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA17570] gi|332072798|gb|EGI83279.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA17545] gi|332073965|gb|EGI84443.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA41301] gi|332199661|gb|EGJ13736.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA41317] gi|332200192|gb|EGJ14265.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA47368] Length = 647 Score = 252 bits (643), Expect = 1e-64, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 156/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I ++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVNKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYEDFNLTDYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QIKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG+DH M G+ + I + + + I ++ Sbjct: 503 YIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +S++ + +N Sbjct: 619 GQKETQTVSVDNFVQAILADIANK 642 >gi|332141950|ref|YP_004427688.1| prolyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype'] gi|327551972|gb|AEA98690.1| prolyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype'] Length = 572 Score = 252 bits (643), Expect = 1e-64, Method: Composition-based stats. Identities = 121/235 (51%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L+ V I+REE Sbjct: 1 MRTSQYLLATQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPSGLRVLNKVANIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLW ESGR++ YG E+LR+ DR+ + + GPTHEEV+T + R+ Sbjct: 61 MNKAGAIEVLMPVVQPADLWEESGRWEEYGPELLRVKDRHQRDFVLGPTHEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQ+Q KFRDE+RPRFG+MR REF MKDAYSF L + +Y KM+ + Sbjct: 121 EISSYKQLPLNLYQVQTKFRDEVRPRFGIMRGREFTMKDAYSFHLEDSCLEETYQKMYGA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R+GL + A+SG IGG+ SHEF VLA++GE + S D D+ E Sbjct: 181 YCAIFSRMGLDFRAVIADSGSIGGNHSHEFHVLAESGEDAIAFSSD-SDYAANVE 234 Score = 166 bits (420), Expect = 7e-39, Method: Composition-based stats. Identities = 69/186 (37%), Positives = 102/186 (54%), Gaps = 3/186 (1%) Query: 259 TSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 T D+ N D+ P+ + RGIEVGHIF G KYS M+ GK + MG Sbjct: 387 TVDIRNVVAGDASPDGQGTLDIKRGIEVGHIFQLGRKYSEAMNCGVLSETGKHQTLTMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKV 375 YGIG R+VAA IE +HD GI WPD +APFKI+LI + ++A E +Y L + Sbjct: 447 YGIGVSRIVAAAIEQNHDKFGIKWPDPIAPFKIALIPMNMHKSHRIKEAVEALYEELVAL 506 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V +DD E+ G F +L+G P +++G + + + +VE K+R TG ++ + L Sbjct: 507 GIEVLFDDRKERPGVMFNDMELIGIPHSIVIGERNLDNQQVEYKNRRTGEKQLLDLSAAK 566 Query: 436 NYASHR 441 + + Sbjct: 567 EFVAAL 572 >gi|312868227|ref|ZP_07728427.1| threonine--tRNA ligase [Streptococcus parasanguinis F0405] gi|311095972|gb|EFQ54216.1| threonine--tRNA ligase [Streptococcus parasanguinis F0405] Length = 647 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 79/444 (17%), Positives = 158/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVDKEV 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 G + P + S +L+ SG +D Y ++M D D + + P + ++++ H Sbjct: 287 AAGYQHVYTPPIASVELYKTSGHWDHYREDMFPPMDMGDGEEFVLRPMNCPHHIEVYKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + + PE + + K+ Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEEEFKKILQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + DD Sbjct: 407 IDVYEDFNLTDYRFRLS-----YRDPEDKHKYFDNDEM--------WENAQRMLKAAVDD 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ L Sbjct: 454 MGVEYYEAEGEAAFYGPKLDI---QVKTALGKEETLSTIQLD----FLLPERFDLH---- 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + + + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTQKIPYQLIVGDKEMEDKAVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 E MS++ + +N Sbjct: 619 GQKETETMSVDAFVELILADIANK 642 >gi|93355883|gb|ABF09972.1| prolyl-tRNA synthetase [Cupriavidus metallidurans CH34] Length = 614 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 126/276 (45%), Positives = 171/276 (61%), Gaps = 3/276 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G + + V I+REE Sbjct: 42 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGIYNYMPVGLRVIRKVENIVREE 101 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+S+P +Q A+LW E+GR+D G E+LRL DR+++ PT EEV+TDI R+ Sbjct: 102 MNRAGAVELSMPVIQPAELWQETGRWDKMGPELLRLKDRHERDFAVQPTSEEVVTDIART 161 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE RPRFG+MR REF MKDAYSFD +G K SY M+ + Sbjct: 162 EIRSYKQLPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDIDGLKASYQNMYDA 221 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+RIF R GL+ + A++G IGG SHEF V+ADTGE + Sbjct: 222 YVRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIADTGEDAIVYCPTSDYAANMEAAEALP 281 Query: 241 DIISLNSIVEQWTA---PYAATSDVHNEKLFDSLPE 273 + + + E+ P A + E L L Sbjct: 282 LLATRAAPAEELKKTSTPEKAKCEHVAEFLGIPLER 317 Score = 163 bits (412), Expect = 6e-38, Method: Composition-based stats. Identities = 68/172 (39%), Positives = 102/172 (59%), Gaps = 3/172 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N D+ P+ K RGIEVGH+F GT+YS M+ATF +GK + Sbjct: 422 PEPAVADLRNVVAGDASPDGKGTLDICRGIEVGHVFMLGTRYSESMNATFLDENGKTQPM 481 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 QMG YGIG R++ A IE ++D +GIIWP ++APF + + + ++ + ++I+A Sbjct: 482 QMGCYGIGVTRILGAAIEQNYDERGIIWPAAIAPFAVVVCPVGYDRNEAVKAEADRIHAE 541 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 L G DV DD GE+ G FA +L+G P +V+VG + + + KVE + R Sbjct: 542 LLAAGVDVILDDRGERPGVMFADWELIGVPHRVVVGDRGLKEGKVEYQGRRD 593 >gi|145629552|ref|ZP_01785350.1| threonyl-tRNA synthetase [Haemophilus influenzae 22.1-21] gi|145632888|ref|ZP_01788621.1| threonyl-tRNA synthetase [Haemophilus influenzae 3655] gi|145639038|ref|ZP_01794646.1| threonyl-tRNA synthetase [Haemophilus influenzae PittII] gi|145641382|ref|ZP_01796961.1| threonyl-tRNA synthetase [Haemophilus influenzae R3021] gi|144978395|gb|EDJ88159.1| threonyl-tRNA synthetase [Haemophilus influenzae 22.1-21] gi|144986544|gb|EDJ93110.1| threonyl-tRNA synthetase [Haemophilus influenzae 3655] gi|145272010|gb|EDK11919.1| threonyl-tRNA synthetase [Haemophilus influenzae PittII] gi|145273925|gb|EDK13792.1| threonyl-tRNA synthetase [Haemophilus influenzae 22.4-21] gi|309750996|gb|ADO80980.1| Threonyl-tRNA synthetase [Haemophilus influenzae R2866] Length = 643 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 144/445 (32%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LAEYLTRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + LW ++G + +Y +++ ++ P + IF + Sbjct: 287 QYDYQEVKGPFMMDRVLWEKTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G +I ++ + P S E D Sbjct: 405 YDIYSTFGFTNIAVKLSTRPENRIGSDE-----------------MWDRAEAGLAAALAH 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L D L + ++ AT Sbjct: 448 NGLEYEIQEGEGAFYGPKIEF---ALRDCLGREWQCGTVQLDFALPGRLD--------AT 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ +I + G W +++ Sbjct: 497 YVAEDNSRKTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPTQAVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ +LS VG V D E++G + L P ++ G K +++ KV ++ Sbjct: 551 QADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRVPYMLVCGDKEIAEGKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R ++EE ++ + Sbjct: 611 RKGADLGTFTVEEFAEILKNQVRSR 635 >gi|296876104|ref|ZP_06900158.1| threonine--tRNA ligase [Streptococcus parasanguinis ATCC 15912] gi|296432815|gb|EFH18608.1| threonine--tRNA ligase [Streptococcus parasanguinis ATCC 15912] Length = 647 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 79/444 (17%), Positives = 158/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVDKEI 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 G + P + S +L+ SG +D Y ++M D D + + P + ++++ H Sbjct: 287 AAGYQHVYTPPIASVELYKTSGHWDHYREDMFPPMDMGDGEEFVLRPMNCPHHIEVYKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + + PE + + K+ Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEEEFKKILQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + DD Sbjct: 407 IDVYEDFNLTDYRFRLS-----YRDPEDKHKYFDNDEM--------WENAQRMLKAAVDD 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ L Sbjct: 454 MGVEYYEAEGEAAFYGPKLDI---QVKTALGKEETLSTIQLD----FLLPERFDLH---- 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + + + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKQLRDRGVRADVDERNEKMQFKIRASQTQKIPYQLIVGDKEMEDKAVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 E MS++ + +N Sbjct: 619 GQKETETMSVDAFVELILTDIANK 642 >gi|228958638|ref|ZP_04120356.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801059|gb|EEM47958.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 640 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 155/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TP+ + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPKQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + + +G++ A++ G W + + I + V Sbjct: 501 DENNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHE 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +I +L++ G V D E++G + A + P +++G K + + V ++ Sbjct: 556 QYANEIALKLAQAGVRVEQDARDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E +L+ + +N + Sbjct: 616 EEKSEVTALDIFVATIEEEITNRK 639 >gi|126667243|ref|ZP_01738216.1| prolyl-tRNA synthetase [Marinobacter sp. ELB17] gi|126628188|gb|EAZ98812.1| prolyl-tRNA synthetase [Marinobacter sp. ELB17] Length = 576 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 120/237 (50%), Positives = 161/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y + +E P DAEI SH+LMLR G+I + + G+Y+WLP+G + L V I+REE Sbjct: 1 MRASRYLIATQKETPADAEIISHQLMLRAGLIRKLAAGLYTWLPMGLRTLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ +P +Q A+LW ESGR+D YG E+LR+ DR+ + +GPTHEEV+TD+ R+ Sbjct: 61 MDRSGAQELLMPAVQPAELWRESGRWDEYGGELLRMNDRHGREFCFGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP F+QIQ KFRDE RPRFGVMR+REF+MKDAYSF + E +Y M + Sbjct: 121 ELKSYKQLPANFFQIQTKFRDERRPRFGVMRAREFIMKDAYSFHINAESLDETYQLMHRT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF RLGL P++A+SG IGG S EF VLA +GE + D+ E Sbjct: 181 YCAIFDRLGLDYRPVQADSGAIGGSGSQEFHVLASSGEDAIVF-STGSDYAANIEKA 236 Score = 173 bits (437), Expect = 8e-41, Method: Composition-based stats. Identities = 69/189 (36%), Positives = 105/189 (55%), Gaps = 3/189 (1%) Query: 255 PYAATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P D+ N D+ + RGIEVGHIF G KYS ++AT +GK + Sbjct: 384 PLGRVEDLRNVVEGDASPCGQGTLEIRRGIEVGHIFKLGNKYSKALNATVLDENGKTATI 443 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R+VAA IE +HD +GIIWPD++APF+++++ + +A EK+Y + Sbjct: 444 YMGCYGIGVSRIVAASIEQNHDDRGIIWPDAIAPFRVAVVLLNGHKSPTVAEAGEKLYQQ 503 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L + G DV DD E+ G +FA +L G P + +V + + +E K R ++D++L Sbjct: 504 LQEAGYDVLLDDRNERPGVKFADMELTGIPHRFVVSDRGLEAGTLEYKGRRDADKQDVAL 563 Query: 432 EEVINYASH 440 + IN+ Sbjct: 564 ADAINFLKS 572 >gi|257087763|ref|ZP_05582124.1| threonyl-tRNA synthetase [Enterococcus faecalis D6] gi|256995793|gb|EEU83095.1| threonyl-tRNA synthetase [Enterococcus faecalis D6] Length = 645 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 161/443 (36%), Gaps = 34/443 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L M+ + G+ WLP G + I +++ Sbjct: 231 FIKMREEAKERDHRKLGKELDLF--MVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISL 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D M + P + ++++ I Sbjct: 289 GYQHVYTPIMADVELYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIH 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + + + Sbjct: 349 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA 408 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ + R D T + D M + D++ Sbjct: 409 VYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKAAMDEL 454 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ F ++ T+ Sbjct: 455 ELDYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTY 503 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++ + + + G + + + + +P +AP + ++I + + Sbjct: 504 VGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV--EAHS 560 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +I RL G V DD E++G + + P Q++VG K + D+ V ++ Sbjct: 561 EYAYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKVPYQLVVGDKEMEDATVNVRRYG 620 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L I+ + N Sbjct: 621 SKETSVEDLSIFIDSMAAEVRNY 643 >gi|229161333|ref|ZP_04289318.1| Threonyl-tRNA synthetase [Bacillus cereus R309803] gi|228622147|gb|EEK78988.1| Threonyl-tRNA synthetase [Bacillus cereus R309803] Length = 639 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 75/444 (16%), Positives = 154/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ ++L L M + + G+ +LP GQ + + A +R Q Sbjct: 234 EYLHFVEEAAKRNHRKLGNELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLRGIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + +LW +SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQELWEKSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TPE + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALANVLHSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W V I + N+ V Sbjct: 501 DEKNEKRRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVSNV-----VHE 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 ++ +L++ G V D E++G + A + P +++G K + V ++ Sbjct: 556 QYANEVVDKLAQAGIRVEQDMRDEKLGYKIREAQMQKVPYVLVIGDKEMESKAVNVRKYS 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E + L+ + N + Sbjct: 616 EEQSEVIELDGFMESVKEEIKNKK 639 >gi|78357681|ref|YP_389130.1| threonyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123741221|sp|Q30Y11|SYT_DESDG RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|78220086|gb|ABB39435.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 644 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 84/439 (19%), Positives = 150/439 (34%), Gaps = 40/439 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 Y I + RD +L L + + G+ W P G + R+E Sbjct: 227 LKSYLNRIEEAKKRDHRKLGTQLDLFS-FQEEGGSGMVYWHPKGALVRAILEDFERKEHL 285 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G + P + +LW +SG YD+Y + M D +++ P + I++S Sbjct: 286 KRGYQIVQTPQILRRELWEKSGHYDNYRENM-YFTDIDEQPYGVKPMNCVAHMLIYKSRS 344 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+LP +++ + R E G++R R+F DA+ + Sbjct: 345 HSYRDLPVRLFELGVVHRHEKSGVLHGLLRVRQFTQDDAHIICTPDQLESEIV-----GV 399 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L + G E+ + T + S + D + + Sbjct: 400 LNFVRD--------------VMGVFGFEYSMEVSTRPEKSIGSDEDWDRATSALVKALEG 445 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y DV KL D L + + + F ++ Sbjct: 446 QGLPYEINEGDGAFYGPKIDV---KLRDCLGREWQCATVQCD----FTLPDRFD----LV 494 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G DG+ H + +G++ V+ G W V +++ Sbjct: 495 YIGQDGERHRPVMVHRVILGSVERFIGVLTEHFAGAFPTWLAPVQARLLTVT------DA 548 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + E+ A L G V D E++G + A L P +++G K V V ++ Sbjct: 549 QNEFAEEARAALMAQGIRVEVDTRNEKLGYKVREAQLEKIPYILVIGDKEVEARGVNVRL 608 Query: 421 RLTGIREDMSLEEVINYAS 439 R +L+EV++ Sbjct: 609 RKGDNLGLKTLDEVVDIIR 627 >gi|322372498|ref|ZP_08047034.1| threonine--tRNA ligase [Streptococcus sp. C150] gi|321277540|gb|EFX54609.1| threonine--tRNA ligase [Streptococcus sp. C150] Length = 648 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 81/447 (18%), Positives = 161/447 (36%), Gaps = 34/447 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L L+E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KTYLKRLEEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVDKEV 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 G + P + S +L+ SG +D Y ++M D D + + P + ++++ H Sbjct: 287 AAGYQHVYTPPIASVELYKTSGHWDHYREDMFPPMDMGDGEEFVLRPMNCPHHIEVYKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + + PE + + K+ Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEDEFKKILQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + AD + F + + + DD Sbjct: 407 IDVYEDFNLTDYRFRLS-----------YRDPADK--HKYFDNDEMWENAQRMLKAAVDD 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ L Sbjct: 454 MGVEYYEAEGEAAFYGPKLDI---QVKTALGKEETLSTIQLD----FLLPERFDLH---- 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + + + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D K+ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWKVAKKLRDRGVRAEVDERNEKMQFKIRASQTQKIPYQLIVGDKEMEDGTVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRF-SNNRP 447 ++ E + +RP Sbjct: 619 GQKQTHTETVSEFVENILADIARKSRP 645 >gi|85059397|ref|YP_455099.1| threonyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans'] gi|123738953|sp|Q2NT31|SYT_SODGM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|84779917|dbj|BAE74694.1| threonyl-tRNA synthase [Sodalis glossinidius str. 'morsitans'] Length = 642 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 152/445 (34%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 + Y + + RD +L L + + + G+ W G + +R + Sbjct: 229 LNTYLQHLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTLFRELETFVRMKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + LW ++G +D+Y + M ++ P + IF + Sbjct: 287 AYQYQEVKGPFMMDRVLWEKTGHWDNYAEHMFT-TSSENREYCIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F + N Sbjct: 346 KSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQVRDE-VNNCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G + I ++ + P S++ A+ + Sbjct: 405 YDMYGTFGFEKILVKLSTRPEKRIGSNDVWGRAEQ-----------------DLAAALTE 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 A Y + L D L + ++ F + ++A+ Sbjct: 448 NGIAFEYQPGEGAFYGPKIEF---TLLDCLDRAWQCGTVQLD----FSLPGR----LNAS 496 Query: 302 FKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G + + V + +G+M ++ + +P + P ++ ++NI + Sbjct: 497 YVGENNERVVPVMIHRAILGSMERFIGILT---EEYAGFYPTWLVPTQVVVMNITDN--- 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + K+ +LS G V D E+IG + L P ++ G K V KV ++ Sbjct: 551 QSEYVAKLTEKLSAAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEACKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R + + E+I H + Sbjct: 611 RRGKDLGSIDVNEIITKLQHEIRSR 635 >gi|16273277|ref|NP_439518.1| threonyl-tRNA synthetase [Haemophilus influenzae Rd KW20] gi|260580800|ref|ZP_05848626.1| threonyl-tRNA synthetase [Haemophilus influenzae RdAW] gi|1174548|sp|P43014|SYT_HAEIN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|1574199|gb|AAC23014.1| threonyl-tRNA synthetase (thrS) [Haemophilus influenzae Rd KW20] gi|260092617|gb|EEW76554.1| threonyl-tRNA synthetase [Haemophilus influenzae RdAW] Length = 643 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 144/445 (32%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LAEYLTRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + LW ++G + +Y +++ ++ P + IF + Sbjct: 287 QYDYQEVKGPFMMDRVLWEKTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G +I ++ + P S E D Sbjct: 405 YDIYSTFGFTNIAVKLSTRPENRIGSDE-----------------MWDRAEAGLAAALAH 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L D L + ++ AT Sbjct: 448 NGLEYEIQEGEGAFYGPKIEF---ALRDCLGREWQCGTVQLDFALPGRLD--------AT 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ +I + G W +++ Sbjct: 497 YVAEDNSRKTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPTQAVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ +LS VG V D E++G + L P ++ G K +++ KV ++ Sbjct: 551 QADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRVPYMLVCGDKEIAEGKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R ++EE ++ + Sbjct: 611 RKGADLGTFTVEEFAEILKNQVRSR 635 >gi|300870146|ref|YP_003785017.1| threonyl-tRNA synthetase [Brachyspira pilosicoli 95/1000] gi|300687845|gb|ADK30516.1| threonyl-tRNA synthetase [Brachyspira pilosicoli 95/1000] Length = 643 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 91/442 (20%), Positives = 169/442 (38%), Gaps = 39/442 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E RD +L L + H G W P G V + IR E ++ G Sbjct: 229 YLKKLKEAKERDHRKLGKELNLFS--FHDEGPGFPFWHPNGMIIYKAVESYIRNENDKRG 286 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + + +LW SG +D+Y + M + +D P + ++ S+I SY Sbjct: 287 YVEIKTPAILNEELWHRSGHWDNYKENM-YFTEIDDTKYAVKPMNCPGGLIVYNSNIHSY 345 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ R EL G+ R R F DA+ F + YL + Sbjct: 346 RDLPLRVAELGFVHRHELSGALHGLFRVRAFTQDDAHIFCTEEQLGDE-IINTIEYYLSV 404 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K + + P S E + S D + Sbjct: 405 YKDFGFKDFEIFVSTRPAKSIGSDE-----------------IWELATKSLMNALDKLGI 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D + D L N + ++ F ++ +++G Sbjct: 448 SYKVNEGDGAFYGPKIDF---NIKDVLDRNWQCGTLQVD----FSLPMRF----EISYEG 496 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DGK H + +G+M ++ ++GK +W + ++++ +++ + Sbjct: 497 KDGKKHTPVMLHRAILGSMERFIGILVEHYNGKFPLWLSPIQVAVVNVL----NEEAQIN 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L + G V D+ + +G++ L P VI+G++ VS+ K+ I+ R + Sbjct: 553 RVHEVAKKLKEAGFRVEIDESNDNLGTKIKKYRLQRTPYTVIIGAEEVSNGKLSIRTRSS 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 +DM L E + Sbjct: 613 QEIKDMDLTEFMEKLQKESKER 634 >gi|269119235|ref|YP_003307412.1| threonyl-tRNA synthetase [Sebaldella termitidis ATCC 33386] gi|268613113|gb|ACZ07481.1| threonyl-tRNA synthetase [Sebaldella termitidis ATCC 33386] Length = 634 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 78/439 (17%), Positives = 161/439 (36%), Gaps = 42/439 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + + RD +L L + +H G ++P G + ++ + I R E + G Sbjct: 230 YLIMMEEAEKRDHRKLGKQLNLF--FLDEHGPGFPFFMPKGMEVINKLQEIWRREHKKAG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + +LW SG + +Y + M ++ ++K P + +++++ SY Sbjct: 288 YKEIKTPVMLDKELWEISGHWFNYRENMYT-SEIDEKEYAIKPMNCPGAILAYKNNLHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 +N P + ++ L R E G+MR R F DA+ F T + + ++ Y R Sbjct: 347 KNFPLKYGEMGLVHRHEFSGALHGLMRVRAFTQDDAHVFC-TEDQIEDQIMEIINLYDRF 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G E+ + T + S + D + Sbjct: 406 YKLFG------------------FEYNIELSTKPDKAIGSDEIWDIAERDLTNALVKMGI 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y D K+ DS+ + ++ F ++ ++ G Sbjct: 448 DYKLNPGDGAFYGPKIDF---KMKDSIGRIWQCGTIQLD----FNLPLRF----HMSYIG 496 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ ++ + G IW ++I + Sbjct: 497 PDGEKHQPVMIHRAMYGSIERFMGILIEHYAGAFPIW------LAPVQVSILTISGEQAE 550 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEIKHRL 422 ++ +L +G D E+IG + A+ P+Q+I+G V++++V I+ Sbjct: 551 YASDLFKKLQNIGIRTELDIRDEKIGYKIREANAEQKIPIQLIIGKNEVANNEVNIRRFG 610 Query: 423 TGIREDMSLEEVINYASHR 441 + M E+ + Sbjct: 611 SQESNTMKAEDFLKLIEEE 629 >gi|228472826|ref|ZP_04057584.1| threonine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624] gi|228275877|gb|EEK14643.1| threonine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624] Length = 649 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 85/451 (18%), Positives = 161/451 (35%), Gaps = 39/451 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD +L L T ++ +G+ WLP G + + A +R+ Q Sbjct: 227 LTEYLTLLEEAKKRDHRKLGKELELFT-FSNKVGQGLPLWLPKGAALRERLEAFLRKAQK 285 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRS 120 + G ++ P + +L+V SG ++ YGK+ + + + P + +I+ S Sbjct: 286 QAGYEQVVTPHIGHKNLYVTSGHWEKYGKDSFQPIATPNEGEEYLLKPMNCPHHCEIYNS 345 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 H SY++LP F + +R E G+ R R F DA+ F TPE + + Sbjct: 346 HPWSYKDLPKRFAEFGTVYRYEQSGELHGLTRVRCFTQDDAHIFC-TPEQLDAEFKHVID 404 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L +F LG + + D + D + + Sbjct: 405 LVLYVFGSLGFDNFTAQVSLR--------------DPENLSKYIGTDENWAKAENAIINA 450 Query: 240 DDIISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 +L ++E A Y D + D+L + ++ ++ Sbjct: 451 AKEKNLTYVIETGEAAFYGPKLDFM---VKDALGRSWQLGTIQVDYNLP--------ERF 499 Query: 299 SATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 +KGAD + H + G+M A++ G +W + + Sbjct: 500 DLWYKGADNELHRPVMIHRAPFGSMERFVAILLEHTAGNLPLWLVPEQVNILCI------ 553 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + K+ L + D+ E IG + A+ FP VIVG + ++ + Sbjct: 554 SEKYEGYAHKVANLLQEADLRPHVDNRNETIGKKIREAETQKFPYMVIVGEEEEKNATLS 613 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN-RP 447 ++ M + + I + N RP Sbjct: 614 VRRHGGEDLGSMKIADFITLIQEEINKNVRP 644 >gi|320353536|ref|YP_004194875.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032] gi|320122038|gb|ADW17584.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032] Length = 641 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 76/439 (17%), Positives = 142/439 (32%), Gaps = 38/439 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +Y + + RD +L L T I Q G+ W P G + ++E R Sbjct: 233 QYLARLEEARKRDHRKLGKQLGLFT--IQDQIGPGLILWQPRGALLRRLIEDYWKDEHYR 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + DLW SG D YG+ M + ++ P + ++ + Sbjct: 291 NGYQLLYTPHIARQDLWKTSGHLDFYGENMYSAMEIDEVMYQLKPMNCPFHIGVYNADKH 350 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR P + ++ +R E G+MR R F DA+ F P+ + + L Sbjct: 351 SYREFPIRWCELGTVYRYERTGALHGLMRVRGFTQDDAHIFCR-PDQLEEEIFNIIDLNL 409 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 I G + + P + S + + + Sbjct: 410 HILKTFGFDQYDVYLSTRP-----------------EKYVGSDEHWQLSTQALKQALEKK 452 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + Y D+ K+ D L + + S ++ F ++ + T Sbjct: 453 GLAYQLDPGEGVFYGPKIDI---KIKDQLGRSWQCSTIQVD----FNLPERFQMNY--TG 503 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + R + +IE + A Sbjct: 504 VDGAEHQPIMIHRALMGSLERFIGVLIEHYAGAFPLWLAPEQARIMNIT-------DDQG 556 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + CE+++ARL +G + D E++ + A L+ P +IVG + + V ++ R Sbjct: 557 EYCEQVHARLRAMGVRIDKDVRNEKLNYKIREAQLMKVPYMLIVGEREKQEGTVTVRKRD 616 Query: 423 TGIREDMSLEEVINYASHR 441 M+ E ++ Sbjct: 617 GENLPAMTPEAFVDLVIEE 635 >gi|194397191|ref|YP_002038247.1| threonyl-tRNA synthetase [Streptococcus pneumoniae G54] gi|238690846|sp|B5E6Q8|SYT_STRP4 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|194356858|gb|ACF55306.1| threonyl-tRNA synthetase (thrS) [Streptococcus pneumoniae G54] Length = 647 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 156/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I ++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVNKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYEDFNLTDYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QIKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG+DH M G+ + I + + + I ++ Sbjct: 503 YIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +S++ + +N Sbjct: 619 GQKETQTVSVDNFVQAILADIANK 642 >gi|152978995|ref|YP_001344624.1| threonyl-tRNA synthetase [Actinobacillus succinogenes 130Z] gi|171704313|sp|A6VNZ2|SYT_ACTSZ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|150840718|gb|ABR74689.1| threonyl-tRNA synthetase [Actinobacillus succinogenes 130Z] Length = 643 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 72/442 (16%), Positives = 141/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD L L + + + G+ W G + +R + Sbjct: 232 YLTRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTVFRELETFVRTKLKEYD 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G + +Y +++ ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWQNY-GDLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + + + + Y Sbjct: 349 RDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIY 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G I ++ + P + E A+ G Sbjct: 409 GT-FGFTDIAVKLSTRPEKRIGADEMWDRAEQG-----------------LANALKHNAL 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y + L D L + ++ +A++ Sbjct: 451 EYEIQEGEGAFYGPKIEF---ALRDCLDREWQCGTIQLDFALPGRL--------NASYVA 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G++ +I + G W V +++ + Sbjct: 500 EDNDRRTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPVQAVVMNIT------DSQAE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +K+ +LS G V D E++G + L P ++ G K +++ KV ++ R Sbjct: 554 YVQKVVKQLSDAGLRVKADLRNEKVGFKVREHTLRRVPYMLVCGDKEIAEGKVSVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 +E+ I + Sbjct: 614 TDLGTYDVEDFIEILKQQVRGR 635 >gi|228908133|ref|ZP_04071981.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 200] gi|228851551|gb|EEM96357.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 200] Length = 640 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 71/444 (15%), Positives = 153/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ ++L L M + + G+ +LP GQ + + A +R Q Sbjct: 234 EYLHFVEEAAKRNHRKLGNELELF--MFSEEAPGMPFYLPKGQMIRNELEAFLRGIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TP+ + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPKQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + I + V Sbjct: 501 DENNDKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHE 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 C ++ +L++ G V D E++G + A + P +++G K + V ++ Sbjct: 556 QYCSEVAHKLAQAGVRVEQDARDEKLGYKIREAQMQKVPYVLVIGDKEMESGAVNVRKYA 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E + ++ + N + Sbjct: 616 EEKSEVVEIDVFVATIEEEIKNRK 639 >gi|225855059|ref|YP_002736571.1| threonyl-tRNA synthetase [Streptococcus pneumoniae JJA] gi|237649181|ref|ZP_04523433.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974] gi|237822258|ref|ZP_04598103.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2] gi|254783541|sp|C1CFK0|SYT_STRZJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|225723844|gb|ACO19697.1| threonyl-tRNA synthetase [Streptococcus pneumoniae JJA] Length = 647 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 156/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I ++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVNKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYEDFNLTDYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QIKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG+DH M G+ + I + + + I ++ Sbjct: 503 YIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +S++ + +N Sbjct: 619 GQKETQTVSVDNFVQAILADIANK 642 >gi|70733467|ref|YP_263242.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf-5] gi|68347766|gb|AAY95372.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf-5] Length = 629 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 75/436 (17%), Positives = 136/436 (31%), Gaps = 39/436 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + Q RD +L L + G W G + +R Q + G Sbjct: 231 YLLRLEQAQQRDHRKLGQQLDLF--HFDDCAPGSVFWHAKGWTLFQELIGYMRRRQEQAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E++ P + LW SG + +Y M ++ + P + IF KSY Sbjct: 289 YQEVNTPDVMDRGLWETSGHWQNYRDHMFTTTTQDQRTFALKPMNCPGAVAIFGHGRKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R E G++R R F DA+ F TP+ + I Sbjct: 349 RDLPLRIAEFGKVHRYEPSGALHGLLRVRHFTQDDAHIFC-TPQQMQSECAATIALVFDI 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + ++ + P S E D + + Sbjct: 408 YKEFGFDQVAVKLSTRPDHRIGSDE-----------------VWDQLEEALVGALQSMHI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I A Y + L D++ + + +++ + ++ Sbjct: 451 DYRINPGEGAFYGPKLEF---VLRDAIGRDWQCGTLQVDLNLP--------ERFAISYID 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 G+ + G++ ++ H G +W +++ + D Sbjct: 500 ERGERCQPVMLHRALFGSLERFIGILLEHHGGALPLWLAPQQAVVLNI------SEAQAD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 I L + G D E+IG + L P ++VG K V ++ R Sbjct: 554 YARAISDSLRRHGLRASADLRNEKIGYKIREHSLQKVPYLLVVGEKEKDGGYVSLRSRNG 613 Query: 424 GIREDMSLEEVINYAS 439 +SLE+ + Sbjct: 614 EDLGRLSLEQALARMR 629 >gi|229815156|ref|ZP_04445493.1| hypothetical protein COLINT_02202 [Collinsella intestinalis DSM 13280] gi|229809386|gb|EEP45151.1| hypothetical protein COLINT_02202 [Collinsella intestinalis DSM 13280] Length = 595 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 88/439 (20%), Positives = 156/439 (35%), Gaps = 43/439 (9%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD ++ L M+ + G +LP G + + RE ++ G +E+ Sbjct: 196 LEEAKKRDHRRIGREMDLF--MMRDEAPGFPFFLPNGMVLKNTLLDYWREIHHKAGYVEI 253 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 S P + + LW+ SG +D Y M +D+ P + ++ S SYR LP Sbjct: 254 STPQIMNKSLWLTSGHWDHYKDNMYSTM-IDDEEYCIKPMNCPGGVLVYSSKPHSYRELP 312 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 +I L R ELR G+ R R F DA+ F + + + ++ + Sbjct: 313 IRAGEIGLVHRHELRGALHGLFRVRCFNQDDAHLFVTPEQLTDEIVGVVR-LIDSVYQKF 371 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 G K + + P S E A+ G D + + Sbjct: 372 GFKY-HVELSTRPEDSMGSDEDWAAAEEG-----------------LKVALDKLGMDYVV 413 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 E A Y D H E DSL + ++ F + T+ ADG+ Sbjct: 414 NEGDGAFYGPKIDFHLE---DSLGRTWQCGTVQLD----FQMPQNFD----LTYVDADGE 462 Query: 309 DHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + G++ ++ + GK +W + + + + RD + Sbjct: 463 KKRPIMLHRVCFGSIERFIGILIEHYAGKFPVWLAPMQVKVLPV------SEKSRDYAHQ 516 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + +L G V DD E+IG + A + P +I+G K V + ++ R + Sbjct: 517 VTEQLEAAGIRVVCDDRDEKIGYKIREARGVDRVPYMLILGEKEVEAGNISVRDR-SNET 575 Query: 427 EDMSLEEVINYASHRFSNN 445 M+++E I Sbjct: 576 VPMAVDEFIAKVVEETRTR 594 >gi|145631389|ref|ZP_01787160.1| threonyl-tRNA synthetase [Haemophilus influenzae R3021] gi|144983048|gb|EDJ90552.1| threonyl-tRNA synthetase [Haemophilus influenzae R3021] Length = 643 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 142/445 (31%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LAEYLTRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + LW ++G + +Y +++ ++ P + IF + Sbjct: 287 QYDYQEVKGPFMMDRVLWEKTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G +I ++ + P S E D Sbjct: 405 YDIYSTFGFTNIAVKLSTRPENRIGSDE-----------------MWDRAEAGLAAALAH 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L D L + ++ AT Sbjct: 448 NGLEYEIQEGEGAFYGPKIEF---ALRDCLGREWQCGTVQLDFALPGRLD--------AT 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ +I + G W I++ Sbjct: 497 YVAEDNSRKTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPTQAVVINIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +++ LS G V D E++G + L P ++ G K +++ KV ++ Sbjct: 551 QSDYVQQVVKTLSDAGLRVKADLRNEKVGFKIREHTLRRVPYMLVCGDKEIAEGKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R ++EE ++ + Sbjct: 611 RKGADLGTFTVEEFAEILKNQVRSR 635 >gi|68250118|ref|YP_249230.1| threonyl-tRNA synthetase [Haemophilus influenzae 86-028NP] gi|81335458|sp|Q4QK77|SYT_HAEI8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|68058317|gb|AAX88570.1| threonyl-tRNA synthetase [Haemophilus influenzae 86-028NP] Length = 643 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 73/445 (16%), Positives = 142/445 (31%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LAEYLTRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + LW ++G + +Y +++ ++ P + IF + Sbjct: 287 QYDYQEVKGPFMMDRVLWEKTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G +I ++ + P S E D Sbjct: 405 YDIYSTFGFTNIAVKLSTRPENRIGSDE-----------------MWDRAEAGLAAALAH 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L D L + ++ AT Sbjct: 448 NGLEYEIQEGEGAFYGPKIEF---ALRDCLGREWQCGTVQLDFALPGRLD--------AT 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ +I + G W +++ Sbjct: 497 YVAEDNSRKTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPTQAVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +++ LS G V D E++G + L P ++ G K +++ KV ++ Sbjct: 551 QADYVQQVVKTLSDAGLRVKADLRNEKVGFKIREHTLRRVPYMLVCGDKEIAEGKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R ++EE ++ + Sbjct: 611 RKGADLGTFTVEEFAEILKNQVRSR 635 >gi|257464982|ref|ZP_05629353.1| threonyl-tRNA synthetase [Actinobacillus minor 202] gi|257450642|gb|EEV24685.1| threonyl-tRNA synthetase [Actinobacillus minor 202] Length = 643 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 73/442 (16%), Positives = 141/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYD 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +G + +Y +++ ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWERTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F T E + I Sbjct: 349 RDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEEQIESEVTSCIKMVYDI 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++I ++ + P D + Sbjct: 408 YSTFGFENIAVKLSTRPENR-----------------IGDDAMWDRAEEGLANALRNNGL 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y + L D L + ++ A++ Sbjct: 451 EYEIQEGEGAFYGPKIEF---ALRDCLDREWQCGTVQLDFALPGRLD--------ASYVA 499 Query: 305 A-DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G+ V + +G++ +I + G W V +++ + Sbjct: 500 EDNGRRTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPVQAVVMNIT------DSQAE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +K+ +LS G V D E++G + L P ++ G K +++ KV ++ R Sbjct: 554 YVQKVVKQLSDAGLRVKADLRNEKVGFKVREHTLRRVPYMLVCGDKEIAEGKVSVRTRKG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 +EE + + Sbjct: 614 ADLGTYKVEEFVEILKSQVRGR 635 >gi|205374566|ref|ZP_03227362.1| threonyl-tRNA synthetase [Bacillus coahuilensis m4-4] Length = 643 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 81/440 (18%), Positives = 163/440 (37%), Gaps = 34/440 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L + +G+ WLP G + I +++ + G Sbjct: 235 LRLLEEAKERDHRKIGKELDLFMN-SQKVGQGLPLWLPKGATVRRMIERYIVDKEEKLGY 293 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S DL+ SG +D Y + M + + +++ ++ P + I+++ I SYR Sbjct: 294 DHVYTPVLGSVDLYKTSGHWDHYQENMFPVMEMDNEELVLRPMNCPHHMMIYKNGIHSYR 353 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP ++ R E+ G+ R R + DA+ F P+ K + ++ + ++ Sbjct: 354 ELPIRIAELGTMHRYEMSGALAGLQRVRGMTLNDAHIFVR-PDQIKEEFKRVVRLVMEVY 412 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSENTDFDDIIS 244 LK R D +T+ + + D++ Sbjct: 413 KDFDLKDYSFRLS--------------YRDPEDTEKYFDDDQMWERAQSMLKEAMDELDV 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y DV ++ +L + + +S ++ F ++ T+ G Sbjct: 459 HYFEADGEAAFYGPKLDV---QVKTALGKEETLSTVQLD----FLLPERFD----LTYVG 507 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DGK H + G + + + + +P +AP ++ +I + V D Sbjct: 508 EDGKQHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVQVIPVSP--DVHFDY 563 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +K+ L G D E+IG + A + P ++VG + + V ++ Sbjct: 564 AKKVQEELRSAGIRADLDSRDEKIGYKIREAQMQKIPYMLVVGDNEIEEEAVNVRKYGEQ 623 Query: 425 IREDMSLEEVINYASHRFSN 444 E + + + Sbjct: 624 KSETLPFAQFFTALKKEVTK 643 >gi|238765296|ref|ZP_04626223.1| Threonyl-tRNA synthetase [Yersinia kristensenii ATCC 33638] gi|238696469|gb|EEP89259.1| Threonyl-tRNA synthetase [Yersinia kristensenii ATCC 33638] Length = 642 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 71/442 (16%), Positives = 141/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y + M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYAEHMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDE-VNSCIKMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S + A+ + Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDDLWTRAED-----------------DLAAALTENGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ F + S A++ G Sbjct: 451 PFDYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGRLS----ASYIG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+M ++ + G W V +++ D Sbjct: 500 ENNDRQVPVMIHRAILGSMERFIGILTEEYAGFFPTWLAPVQVVVMNIT------DSQSD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L G D E+IG + L P ++ G K V K+ ++ R Sbjct: 554 YVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + V++ + Sbjct: 614 KDLGSLDVNVVVDQLLAEIRSR 635 >gi|304406649|ref|ZP_07388304.1| threonyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] gi|304344182|gb|EFM10021.1| threonyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] Length = 645 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 79/444 (17%), Positives = 162/444 (36%), Gaps = 39/444 (8%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E RD +L + T + +G+ WLP G + + I + + R G Sbjct: 235 LHFLEEAKKRDHRKLGRELKMFT-FSREVGQGLPLWLPNGARVRRTMERYIVDLEERLGY 293 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L + +L+ SG ++ Y ++M +++ ++ P + +++S ++SYR Sbjct: 294 SHVYTPVLANVELYKISGHWEHYSEDMFPPMALDNEELVLRPMNCPHHMMVYKSDMRSYR 353 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ R E+ G+ R R + DA+ F P+ K + ++ +++ Sbjct: 354 DLPIRVAELGTMHRYEMSGALTGLHRVRAMTLNDAHIFCR-PDQIKEEFARVINLIRQVY 412 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS-KDFMDFPIPSENTDFDDIIS 244 G+K R D +T+ + + + +++ Sbjct: 413 ADFGIKEYRFRLS--------------YRDPQDTEKYFPDDNMWEMSQRMLREVVEELEL 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ +L + + +S ++ F ++ + G Sbjct: 459 PFFEAEGEAAFYGPKLDV---QIKTALGKEETLSTAQLD----FLLPERF----ELEYVG 507 Query: 305 ADGKDHYVQMGSYGIG--AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DGK H + GI R+ A ++E+ + A Sbjct: 508 DDGKKHRPVVIHRGIISTMERMTAYLLENFAGALPLWLSPMHARVIPV-------SSAYD 560 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 ++ +L G D E++G + A L P +IVG V ++ R Sbjct: 561 GYAREVEEKLLAAGVRAESDLRNEKLGYKIREAQLEKLPYMLIVGDNEAQAGTVSVRKRG 620 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 G + E+I + + + Sbjct: 621 EGDIGSKEVSELIALLTEEIATKK 644 >gi|221232374|ref|YP_002511527.1| threonyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669] gi|254783539|sp|B8ZM32|SYT_STRPJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|220674835|emb|CAR69409.1| threonyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669] Length = 647 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 155/444 (34%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I ++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVNKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYEDFNLTDYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QIKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG+DH M G + I + + + I ++ Sbjct: 503 YIGADGEDHRPVMIHRGAISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +S++ + +N Sbjct: 619 GQKETQTVSVDNFVQAILADIANK 642 >gi|229115852|ref|ZP_04245250.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-3] gi|228667595|gb|EEL23039.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-3] Length = 640 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 72/444 (16%), Positives = 154/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ ++L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGNELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TPE + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMGQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + I + V Sbjct: 501 DVKNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHV 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 ++ +L++ G + D E++G + A + P +++G K + + V ++ Sbjct: 556 QYANEVADKLAQAGVRIERDVRDEKLGYKIREAQMQKIPYVLVIGDKEMENGSVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E ++L+ N + Sbjct: 616 EEKSEVVALDVFAASMEEEIKNRK 639 >gi|120598808|ref|YP_963382.1| threonyl-tRNA synthetase [Shewanella sp. W3-18-1] gi|166225502|sp|A1RJI3|SYT_SHESW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|120558901|gb|ABM24828.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Shewanella sp. W3-18-1] Length = 642 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 72/443 (16%), Positives = 142/443 (32%), Gaps = 40/443 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S + + + RD +L L + + + G+ W G + IR + N Sbjct: 229 LSTHLTRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWSIFLELERFIRRKLN 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + LW SG +D Y + M ++ P + IF + Sbjct: 287 QYTYQEVKGPLMMDRVLWERSGHWDKYSEAMFT-TSSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F + + + Sbjct: 346 KSYRDLPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTDDQVQEE-VSACIQMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + G ++I ++ + P D + Sbjct: 405 YDTYSTFGFENIVVKLSTRPEKR-----------------IGDDAMWDRAEEALKQALRA 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 +++ A Y + L D L + ++ G AT Sbjct: 448 NNIEFTLLPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDYALPNRLG--------AT 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ ++ + G+ W + +++ Sbjct: 497 YVAEDNSRQTPVMIHRAILGSLERFLGILIEEYAGRFPTWLAPMQVVVMNIT------DK 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++I + G +D E+IG + L P ++VG + + + +V ++ Sbjct: 551 QADYVQEIVKFFKEQGIRASFDLRNEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R M LE+ + S Sbjct: 611 RDGIDLGKMRLEDFATKIHQQIS 633 >gi|294626197|ref|ZP_06704803.1| threonyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599549|gb|EFF43680.1| threonyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 634 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 71/438 (16%), Positives = 138/438 (31%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + + + RD L + + + G+ W P G V +R+ +G Sbjct: 232 YIMRMEEADKRDHRRIGKAQDLF--HLQEEAPGLVFWHPKGWSLWQVVEQYMRKVYRDSG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D+Y M + + P + +F + SY Sbjct: 290 YGEVRCPQILDVSLWQKSGHWDNYQDAMF-FTESEKRTYAVKPMNCPGHVQVFNQGLHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F L + L + Sbjct: 349 RDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCL-ESQIESEVTAFHQQALAV 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P D + + Sbjct: 408 YTAFGFDDIQIKIALRPEKR-----------------LGDDATWDKAESALRSALGVCGV 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + H L D++ ++ ++ G A + Sbjct: 451 EWQELPGEGAFYGPKIEYH---LKDAIGRTWQLGTMQVDFMMPGRLG--------AEYVD 499 Query: 305 AD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + K H V + +G+M ++ H G W V ++ + Sbjct: 500 ENSQKKHPVMLHRAIVGSMERFIGILIEHHAGAFPSWLAPVQVVVANIT------DAQAE 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L+ G V D E+IG + + P ++VG + + V ++ R Sbjct: 554 YVDSVRKTLANQGFRVSADLRNEKIGYKIREHTMQRVPYLLVVGDREKENGAVAVRTRSG 613 Query: 424 GIREDMSLEEVINYASHR 441 M++ I Sbjct: 614 EDLGTMTVSAFIERLQAE 631 >gi|228965357|ref|ZP_04126449.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] gi|228794347|gb|EEM41861.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] Length = 640 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 73/443 (16%), Positives = 153/443 (34%), Gaps = 40/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TP+ + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPKQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + + + V Sbjct: 501 DENNDKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVVPVSNAVHE 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 C ++ +L+K G V D E++G + A + P +++G K + V ++ Sbjct: 556 QYCSEVAHKLAKAGVRVEQDARDEKLGYKIREAQMQKVPYFLVIGDKEMESGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 E ++L+ + N Sbjct: 616 EEKSEVVALDVFVARIEEEIKNR 638 >gi|148825906|ref|YP_001290659.1| threonyl-tRNA synthetase [Haemophilus influenzae PittEE] gi|166223344|sp|A5UBX5|SYT_HAEIE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|148716066|gb|ABQ98276.1| threonyl-tRNA synthetase [Haemophilus influenzae PittEE] Length = 643 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 73/445 (16%), Positives = 142/445 (31%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LAEYLTRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + LW ++G + +Y +++ ++ P + IF + Sbjct: 287 QYDYQEVKGPFMMDRVLWEKTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G +I ++ + P S E D Sbjct: 405 YDIYSTFGFTNIAVKLSTRPENRIGSDE-----------------MWDRAEAGLAAALAH 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L D L + ++ AT Sbjct: 448 NGLEYEIQEGEGAFYGPKIEF---ALRDCLGREWQCGTVQLDFALPGRLD--------AT 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ +I + G W +++ Sbjct: 497 YVAEDNSRKTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPTQAVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +++ LS G V D E++G + L P ++ G K +++ KV ++ Sbjct: 551 QSDYVQQVVKTLSDAGLRVKADLRNEKVGFKIREHTLRRVPYMLVCGDKEIAEGKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R ++EE ++ + Sbjct: 611 RKGADLGTFTVEEFAEILKNQVRSR 635 >gi|238749482|ref|ZP_04610987.1| Threonyl-tRNA synthetase [Yersinia rohdei ATCC 43380] gi|238712137|gb|EEQ04350.1| Threonyl-tRNA synthetase [Yersinia rohdei ATCC 43380] Length = 642 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 71/442 (16%), Positives = 141/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y + M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYAEHMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDE-VNSCIKMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S + A+ + Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDDLWTRAED-----------------DLAAALTENGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ F + S A++ G Sbjct: 451 PFDYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGRLS----ASYIG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+M ++ + G W V +++ D Sbjct: 500 ENNDRQVPVMIHRAILGSMERFIGILTEEYAGFFPTWLAPVQVVVMNIT------DSQSD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L G D E+IG + L P ++ G K V K+ ++ R Sbjct: 554 YVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + V++ + Sbjct: 614 KDLGSLDVNVVVDQLLAEIRSR 635 >gi|221320079|ref|ZP_03601373.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. JH642] Length = 643 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 87/433 (20%), Positives = 160/433 (36%), Gaps = 34/433 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L + +G+ WLP G + I +++ G Sbjct: 235 LRMLEEAKERDHRKLGKELKLFAN-SQKVGQGLPLWLPKGATIRRVIERYIVDKEISLGY 293 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG +D Y + M + +++ ++ P + I++ I SYR Sbjct: 294 EHVYTPVLGSKELYETSGHWDHYQEGMFPPMEMDNETLVLRPMNCPHHMMIYKQDIHSYR 353 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP ++ R E+ G+ R R + DA+ F + + ++ Sbjct: 354 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTVR-LIQDVY 412 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIIS 244 GL R D +T+ + D M S D+I Sbjct: 413 EDFGLSDYTFRLS--------------YRDPEDTEKYFDDDEMWNKAQSMLKEAMDEIGH 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ ++ + + +S ++ F ++ T+ G Sbjct: 459 DYYEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LTYIG 507 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DGK H + G + + + + P +AP + +I + V D Sbjct: 508 EDGKQHRPVVIHR--GVVSTMERFVAFLIEEHKGALPTWLAPVQFQVIPVSP--AVHLDY 563 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +K+ RL G V D E+IG + A + P ++VG + + V ++ Sbjct: 564 AKKVQERLQCEGLRVEVDSRDEKIGYKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQ 623 Query: 425 IREDMSLEEVINY 437 E +SL+E + Sbjct: 624 NSETISLDEFVKK 636 >gi|33240514|ref|NP_875456.1| threonyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|73919816|sp|Q7VBM8|SYT_PROMA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|33238042|gb|AAQ00109.1| Threonyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 643 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 85/448 (18%), Positives = 155/448 (34%), Gaps = 43/448 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L I + RD KL L + + G+ W P G + + IRE Sbjct: 231 YLLKIEEAEKRDHRKIGKKLDLF--HTQEEAPGMIFWHPKGWSIYQVLESFIRETLILND 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P LW +SG +D + ++M ++ P + +F +KSY Sbjct: 289 YKEIKTPQTVDRSLWEKSGHWDKFKEDMFTTT-SENREYAIKPMNCPCHIQVFNEGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F T + +K + Sbjct: 348 RDLPIRLAEFGSCHRNEPSGALHGLMRVRNFVQDDAHIFC-TEAQIQDEVSKFIDLVFDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G +SI ++ + P S E ++ K F +P E Sbjct: 407 YKAFGFESIIIKLSTRPTKRVGSDEIWDKSEKALADALNIKKFEWSYLPGE--------- 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D + + ++ G A++ Sbjct: 458 --------GAFYGPKIEF---SLKDCIDRVWQCGTIQVDFSMPHRLG--------ASYID 498 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + V + +G+ ++ + +P ++P ++ +I I + + Sbjct: 499 ENSQKKVPVMLHRAILGSFERFIGILI---EEYEGKFPPWLSPIQVIVIGITDRNSI--- 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C++I L G +D E++G + L P +I+G K + V ++ Sbjct: 553 KCKEISNLLMLRGYRATYDTRNEKVGLKIREHTLQRIPYLLIIGDKEQEEGTVSVRTMHG 612 Query: 424 GIREDMSLEEVINYASHRFS---NNRPV 448 M L E + S N +PV Sbjct: 613 IDMGSMKLTEFQEIINEAISLKGNYKPV 640 >gi|16079947|ref|NP_390773.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221310836|ref|ZP_03592683.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221315161|ref|ZP_03596966.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221324361|ref|ZP_03605655.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY] gi|135175|sp|P18255|SYT1_BACSU RecName: Full=Threonyl-tRNA synthetase 1; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|143766|gb|AAA22864.1| (thrSv) (EC 6.1.1.3) [Bacillus subtilis] gi|1769999|emb|CAA99608.1| threonyl-tRNA-synthetase [Bacillus subtilis] gi|2293284|gb|AAC00362.1| threonine tRNA synthetase [Bacillus subtilis] gi|2635360|emb|CAB14855.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] Length = 643 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 87/433 (20%), Positives = 160/433 (36%), Gaps = 34/433 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L + +G+ WLP G + I +++ G Sbjct: 235 LRMLEEAKERDHRKLGKELKLFAN-SQKVGQGLPLWLPKGATIRRVIERYIVDKEISLGY 293 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG +D Y + M + +++ ++ P + I++ I SYR Sbjct: 294 EHVYTPVLGSKELYETSGHWDHYQEGMFPPMEMDNETLVLRPMNCPHHMMIYKQDIHSYR 353 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP ++ R E+ G+ R R + DA+ F + + ++ Sbjct: 354 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTVR-LIQDVY 412 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIIS 244 GL R D +T+ + D M S D+I Sbjct: 413 EDFGLSDYTFRLS--------------YRDPEDTEKYFDDDEMWNKAQSMLKEAMDEIGH 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ ++ + + +S ++ F ++ T+ G Sbjct: 459 DYYEAEGEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LTYIG 507 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DGK H + G + + + + P +AP + +I + V D Sbjct: 508 EDGKQHRPVVIHR--GVVSTMERFVAFLIEEHKGALPTWLAPVQFQVIPVSP--AVHLDY 563 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +K+ RL G V D E+IG + A + P ++VG + + V ++ Sbjct: 564 AKKVQERLQCEGLRVEVDSRDEKIGYKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQ 623 Query: 425 IREDMSLEEVINY 437 E +SL+E + Sbjct: 624 NSETISLDEFVKK 636 >gi|146293114|ref|YP_001183538.1| threonyl-tRNA synthetase [Shewanella putrefaciens CN-32] gi|166225500|sp|A4Y706|SYT_SHEPC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|145564804|gb|ABP75739.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Shewanella putrefaciens CN-32] Length = 642 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 72/443 (16%), Positives = 142/443 (32%), Gaps = 40/443 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S + + + RD +L L + + + G+ W G + IR + N Sbjct: 229 LSTHLTRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWSIFLELERFIRRKLN 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + LW SG +D Y + M ++ P + IF + Sbjct: 287 QYTYQEVKGPLMMDRVLWERSGHWDKYSEAMFT-TSSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F + + + Sbjct: 346 KSYRDLPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTDDQVQEE-VSACIQMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + G ++I ++ + P D + Sbjct: 405 YDTYSTFGFENIVVKLSTRPEKR-----------------IGDDAMWDRAEEALKQALRA 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 +++ A Y + L D L + ++ G AT Sbjct: 448 NNIEFTLLPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDYALPSRLG--------AT 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ ++ + G+ W + +++ Sbjct: 497 YVAEDNSRQTPVMIHRAILGSLERFLGILIEEYAGRFPTWLAPMQVVVMNIT------DK 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++I + G +D E+IG + L P ++VG + + + +V ++ Sbjct: 551 QADYVQEIVKFFKEQGIRASFDLRNEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R M LE+ + S Sbjct: 611 RDGIDLGKMRLEDFATKIHQQIS 633 >gi|219871154|ref|YP_002475529.1| threonyl-tRNA synthetase [Haemophilus parasuis SH0165] gi|254783524|sp|B8F5H9|SYT_HAEPS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|219691358|gb|ACL32581.1| threonyl-tRNA synthetase [Haemophilus parasuis SH0165] Length = 643 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 72/441 (16%), Positives = 143/441 (32%), Gaps = 38/441 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD L L + + + G+ W G + +R + + Sbjct: 232 YLHRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYD 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G + +Y +++ ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWQNY-GDLMFTTQSENREYAIKPMNCPGHIQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + + I Sbjct: 349 RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCMPEQVESE-VTSCIKMVYDI 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++I ++ + P + E A+ Sbjct: 408 YSTFGFENIQVKLSTRPANSIGTDEMWNKAEA-----------------DLAAALTANGL 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y + L D L + ++ F+ + S A Sbjct: 451 AFEIQEGEGAFYGPKIEF---ALRDCLDREWQCGTIQLD----FFLPERLSASYVAEDND 503 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 V + +G++ +I + G W V +++ + Sbjct: 504 RK---TPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPVQAVVMNIT------DSQAEY 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ +LS G V D E++G + L P ++ G K +++ KV ++ R Sbjct: 555 VQQVVKQLSDAGLRVKADLRNEKVGFKVREHTLRRVPYMLVCGDKEIAEGKVSVRTRKGA 614 Query: 425 IREDMSLEEVINYASHRFSNN 445 +EE + + Sbjct: 615 DLGTYKVEEFVEMLKKQVRGR 635 >gi|123442189|ref|YP_001006170.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166225517|sp|A1JMJ9|SYT_YERE8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|122089150|emb|CAL11992.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 642 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 71/442 (16%), Positives = 141/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y + M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYAEHMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDE-VNSCIKMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S + A+ + Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDDLWTRAED-----------------DLAAALTENGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ F + S A++ G Sbjct: 451 PFDYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGRLS----ASYIG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+M ++ + G W V +++ D Sbjct: 500 ENNDRQVPVMIHRAILGSMERFIGILTEEYAGFFPTWLAPVQVVVMNIT------DSQSD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L G D E+IG + L P ++ G K V K+ ++ R Sbjct: 554 YVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + V++ + Sbjct: 614 KDLGSLDVNVVVDQLLAEIRSR 635 >gi|322517198|ref|ZP_08070081.1| threonine--tRNA ligase [Streptococcus vestibularis ATCC 49124] gi|322124257|gb|EFX95773.1| threonine--tRNA ligase [Streptococcus vestibularis ATCC 49124] Length = 648 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 80/447 (17%), Positives = 160/447 (35%), Gaps = 34/447 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L L+E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KAYLKRLEEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVDKEV 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 G + P + S +L+ SG +D Y ++M D D + + P + ++++ H Sbjct: 287 AAGYQHVYTPPIASVELYKTSGHWDHYREDMFPPMDMGDGEEFVLRPMNCPHHIEVYKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + + PE + + K+ Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEDEFKKILQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + AD + F + + + DD Sbjct: 407 IDVYEDFNLTDYRFRLS-----------YRDPADK--HKYFDNDEMWENAQRMLKAAVDD 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ L Sbjct: 454 MGVEYYEAEGEAAFYGPKLDI---QVKTALGKEETLSTIQLD----FLLPERFDLH---- 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + + + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKELRDRGVRAEVDERNEKMQFKIRASQTQKIPYQLIVGDKEMEDGTVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRF-SNNRP 447 ++ E + +RP Sbjct: 619 GQKQTHTETVSEFVENILADIARKSRP 645 >gi|313885013|ref|ZP_07818765.1| threonine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8] gi|312619704|gb|EFR31141.1| threonine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8] Length = 651 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 81/444 (18%), Positives = 158/444 (35%), Gaps = 36/444 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + RD +L L MI + G+ WLP G + I +++ G Sbjct: 234 RREEAKERDHRKLGKELGLF--MISQEAGSGLPFWLPKGATIRRVIERYIMDKEIALGYE 291 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYR 126 + P + DL+ SG + Y +M D D M + P + I+++ I SYR Sbjct: 292 HVYTPVMAKTDLYKTSGHWAHYKDDMFPPMDMGDGEMLVLRPMNCPHHMLIYKNEIHSYR 351 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP ++ + R E G+ R RE + D++ F + + ++ ++ Sbjct: 352 ELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDSHIFVRPDQIKDE-FKRVLNLIADVY 410 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDIIS 244 + R D + + + + D++ Sbjct: 411 EDFNITDYRFRLS--------------YRDPEDKEKYFDDYAMWEKAESMLKEAMDELGL 456 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y DV + ++ + +S ++ F ++ T+ G Sbjct: 457 EYFEAIGEAAFYGPKLDV---QFKTAIGLEETMSTIQLD----FLLPERFD----LTYVG 505 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG++ + + + G + + + + +P +AP + L+ + + D Sbjct: 506 EDGQNTHRPVVIHR-GVVSTMERFVAYLIEEYKGAFPTWLAPVQAILLPVSP--EHHGDR 562 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E+IY L + G V D E++G + A P Q+++G + V D V I+ Sbjct: 563 VEEIYHALQEAGFRVEMDLRNEKLGYKIREAQTSKIPYQIVIGDQEVEDGTVNIRRYGAQ 622 Query: 425 IREDMSLEEVINYASHRF-SNNRP 447 +SLE+ I + +RP Sbjct: 623 DSNSVSLEDFIALLNEDVARKSRP 646 >gi|85859447|ref|YP_461649.1| prolyl-tRNA synthetase [Syntrophus aciditrophicus SB] gi|85722538|gb|ABC77481.1| prolyl-tRNA synthetase [Syntrophus aciditrophicus SB] Length = 597 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 134/251 (53%), Positives = 169/251 (67%), Gaps = 1/251 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ FLP +E P DAE+ SH+LMLR GMI + S GIYS+LPLG + L V IIREE Sbjct: 20 MRYSEMFLPTEREIPSDAEVVSHQLMLRAGMIRKLSAGIYSYLPLGYRVLRKVEQIIREE 79 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P +Q A+LW ESGR++ YGKE+LR DR+D+ GPTHEEV+TD+ R Sbjct: 80 MNRAGAQEVYLPMVQPAELWQESGRWEHYGKELLRFRDRHDREYCLGPTHEEVITDLVRH 139 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IK+YR LP YQIQ KFRDE+RPRFGVMR REF MKDAYSFD EG++ SY KMF + Sbjct: 140 EIKTYRQLPKNLYQIQTKFRDEIRPRFGVMRGREFGMKDAYSFDADEEGAEISYQKMFEA 199 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GL+ P+ A+SG IGG SHEF+V+AD+GE + + E + Sbjct: 200 YKRIFARCGLRFRPVEADSGTIGGSFSHEFMVMADSGEDGLVFCATCS-YAANLEKAEVH 258 Query: 241 DIISLNSIVEQ 251 + ++ Sbjct: 259 PPEKMEISNDE 269 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 114/202 (56%), Gaps = 2/202 (0%) Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSAT 301 L ++ E +A +D+ + DS P + ARGIEVGH+F GTKYS M A+ Sbjct: 386 HLRNVNEGRDFQISAFADLKVARETDSCPRCQGALKFARGIEVGHVFKLGTKYSKAMGAS 445 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + +GK+ + MG YGIG R VAA IE +HD GI+WP ++P+++ + + +D+ Sbjct: 446 YLDKNGKEQIMIMGCYGIGTGRTVAACIEQNHDENGIVWPMPISPYQVIITPVNMNDKAL 505 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + E++Y L+ G +V DD E+ G +F ADL+G P++V VG K +++ KVE++ R Sbjct: 506 AETAERLYESLAGKGAEVLLDDRDERAGVKFKDADLIGIPIRVTVGPKKLAEGKVEVRLR 565 Query: 422 LTGIREDMSLEEVINYASHRFS 443 TG D+ ++ V Sbjct: 566 DTGETSDVQVDSVEKMILRVIE 587 >gi|218897336|ref|YP_002445747.1| threonyl-tRNA synthetase [Bacillus cereus G9842] gi|218542902|gb|ACK95296.1| threonyl-tRNA synthetase [Bacillus cereus G9842] Length = 640 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 73/443 (16%), Positives = 153/443 (34%), Gaps = 40/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TP+ + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPKQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + + + V Sbjct: 501 DENNDKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVVPVSNAVHE 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 C ++ +L+K G V D E++G + A + P +++G K + V ++ Sbjct: 556 QYCSEVAHKLAKAGVRVEQDARDEKLGYKIREAQMQKVPYFLVIGDKEMESGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 E ++L+ + N Sbjct: 616 EEKSEVVALDVFVARIEEEIKNR 638 >gi|310658431|ref|YP_003936152.1| threonyl-tRNA synthetase [Clostridium sticklandii DSM 519] gi|308825209|emb|CBH21247.1| threonyl-tRNA synthetase [Clostridium sticklandii] Length = 637 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 158/443 (35%), Gaps = 42/443 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 ++ +++E RD +L L T + G +LP G + + RE G Sbjct: 231 YIQMMEEAKLRDHRKLGKELELFTLL--DEGPGFPFFLPKGTVLKNKLLEYWREVHREDG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + + LW SG + +Y + M + + +++ P + ++++ ++SY Sbjct: 289 YVEIETPIILNRQLWETSGHWFNYKENMYTV-EIDEEDFAIKPMNCPGGMLVYQTKMRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 ++ P +I R EL G+MR R F DA+ F L + + +I Sbjct: 348 KDFPIRMGEIGRVHRHELSGALHGLMRVRAFTQDDAHIFMLPEQIKDE-IKGVVSLIDKI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + T + D + +++ Sbjct: 407 YKTFGFSY------------------HLELSTRPEKFLGEISMWDEAESNLKAALEELGL 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D H + R + G I + ++ G Sbjct: 449 PYIINEGDGAFYGPKIDFHL----------RDCIGRTWQCGTI-QLDYQLPERFELSYIG 497 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ ++ + +P +AP ++ ++ I D Sbjct: 498 KDGEKHRPVMIHRVAFGSIERFIGILI---EHYAGKFPLWIAPVQVKILPISDK---FMD 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++I + V DD E+IG + A L P +IVG K +++ + ++ R Sbjct: 552 YAKQIEKAMYDAKIRVELDDRAEKIGYKIREAQLEKVPYMIIVGEKELNEGNISVRSRDL 611 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 G + ++ + + + + Sbjct: 612 GDLGFKNTDDFLKELNEEIISRK 634 >gi|322392280|ref|ZP_08065741.1| threonine--tRNA ligase [Streptococcus peroris ATCC 700780] gi|321144815|gb|EFX40215.1| threonine--tRNA ligase [Streptococcus peroris ATCC 700780] Length = 647 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 78/442 (17%), Positives = 161/442 (36%), Gaps = 33/442 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +L + +E RD +L L MI + +G+ WLP G + I +++ Sbjct: 231 YLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRILERYIVDKEVAA 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIK 123 G + P + S +L+ SG +D Y ++M D D + + P + ++++ H+ Sbjct: 289 GYQHVYTPPIASVELYKTSGHWDHYREDMFPPMDMGDGEEFVLRPMNCPHHIEVYKHHVH 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP +I + R E ++ + + + PE + + K+ + Sbjct: 349 SYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEDEFKKILQLIID 408 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ L R + AD + F + + + DD+ Sbjct: 409 VYEDFNLTDYRFRLS-----------YRDPADK--HKYFDNDEMWENAQRMLKAAVDDMG 455 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 E A Y D+ ++ +L + + +S ++ F ++ L + Sbjct: 456 VEYYEAEGEAAFYGPKLDI---QMKTALGKEETLSTIQLD----FLLPERFDLH----YI 504 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 GADG++H M G+ + I + + I ++ D Sbjct: 505 GADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQV----TVIPVSNEKHVD 560 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D+ E++ + + P Q+IVG K + ++ V ++ Sbjct: 561 YAWEVAKKLRDRGVRVDVDERNEKMQFKIRASQTQKIPYQLIVGDKEMDENAVNVRRYGQ 620 Query: 424 GIREDMSLEEVINYASHRFSNN 445 E M ++ + +N Sbjct: 621 KETETMPVDAFVELILADIANK 642 >gi|332161611|ref|YP_004298188.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665841|gb|ADZ42485.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 642 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 71/442 (16%), Positives = 141/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y + M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYAEHMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDE-VNSCIKMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S + A+ + Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDDLWTRAED-----------------DLAAALTENGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ F + S A++ G Sbjct: 451 PFDYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGRLS----ASYIG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+M ++ + G W V +++ D Sbjct: 500 ENNDRQVPVMIHRAILGSMERFIGILTEEYAGFFPTWLAPVQVVVMNIT------DSQSD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L G D E+IG + L P ++ G K V K+ ++ R Sbjct: 554 YVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + V++ + Sbjct: 614 KDLGSLDVNVVVDQLLAEIRSR 635 >gi|262052254|ref|ZP_06024459.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus 930918-3] gi|259159855|gb|EEW44894.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus 930918-3] Length = 645 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 161/445 (36%), Gaps = 33/445 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD +L L T G+ WLP G + I +++ Sbjct: 229 KAHLQMLEERKERDHRKIGKELELFTN-SQLVGAGLPLWLPNGATIRREIERYIVDKEVS 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHI 122 G + P L + DL+ SG +D Y ++M ++ M+ P + I+ + Sbjct: 288 MGYDHVYTPVLANVDLYKTSGHWDRYQEDMFPPMQLDETESMVLRPMNCPHHMMIYANKP 347 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ R E ++ + + + P+ K + ++ + Sbjct: 348 HSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMII 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDD 241 ++ G + R D + + + D + D+ Sbjct: 408 DVYKDFGFEDYSFRLS--------------YRDPEDKEKYFDDDDMWNKAENMLKEAADE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y DV ++ ++ + + +S ++ F ++ T Sbjct: 454 LGLSYEEAIGEAAFYGPKLDV---QVKTAMGKEETLSTAQLD----FLLPERFD----LT 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + G DG+ H + G + + + + +P +AP ++ +I + + Sbjct: 503 YIGQDGEHHRPVVIHR--GVVSTMERFVAFLTEETKGAFPTWLAPKQVQIIPVNV--DLH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ L G V DD E++G + A + P Q++VG K V +++V ++ Sbjct: 559 YDYARQLQDELKSQGVRVSIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRQY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + +E + +E I + Sbjct: 619 GSQDQETVEKDEFIWNLVDEIRLKK 643 >gi|148244740|ref|YP_001219434.1| threonyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA] gi|166225515|sp|A5CWF9|SYT_VESOH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|146326567|dbj|BAF61710.1| threonyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA] Length = 636 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 80/440 (18%), Positives = 142/440 (32%), Gaps = 41/440 (9%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L L+E RD L I + + G+ W G V +R Sbjct: 227 KVYLHKLEEVARRDHRKIGKTQDLF--HIQEETPGMVFWHAKGWILYQLVEQYMRGIFRD 284 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L LW +SG +D +G M D+ P + I+ +K Sbjct: 285 NGYQEVHTPQLIDKSLWEKSGHWDKFGDVMFTTT-SGDRDYAVKPMNCPAHIQIYNQGLK 343 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYRNLP + R+E G+MR R F+ D + F + + Sbjct: 344 SYRNLPLRLAEFGSCHRNEPSGTLHGIMRVRNFVQDDGHIFCTPEQIQDE-VSTFIDLTF 402 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G + I ++ + P S E ++ + +K+ + Sbjct: 403 NVYKYFGFEKINIKLSTRPKKRVGSDEVWDKSEIALVEALNAKNIVWE------------ 450 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + E A Y + L D L + ++ G A F Sbjct: 451 -----LQEGEGAFYGPKIEFI---LKDCLDRQWQCGTLQVDFSMPKRLG--------AQF 494 Query: 303 KGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + K V + +G++ ++ ++G W I + Sbjct: 495 IDENSVKKTPVILHRAIMGSLERFLGILIEHYEGAYPCW------LSPIQAVIINISEKH 548 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 I +L K G V D E++ + L +P ++VG + + +V ++ R Sbjct: 549 AKFIVDIVKKLKKQGLRVISDLRNEKVSFKIREHSLQRYPYILVVGDREMEKGQVSVRQR 608 Query: 422 LTGIREDMSLEEVINYASHR 441 MS+ I + Sbjct: 609 GGKDLGAMSVGTFIKKVNQE 628 >gi|257091083|ref|ZP_05585444.1| threonyl-tRNA synthetase [Enterococcus faecalis CH188] gi|256999895|gb|EEU86415.1| threonyl-tRNA synthetase [Enterococcus faecalis CH188] Length = 645 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 78/443 (17%), Positives = 162/443 (36%), Gaps = 34/443 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L M+ + G+ WLP G + I +++ R Sbjct: 231 FIKMREEAKERDHRKLGKELDLF--MVSQEVGSGLPFWLPKGATIRRTIERYIVDKEIRL 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D M + P + ++++ I Sbjct: 289 GYQHVYTPIMADVELYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIH 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + + + Sbjct: 349 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA 408 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ + R D T + D M + D++ Sbjct: 409 VYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKAAMDEL 454 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ F ++ T+ Sbjct: 455 ELDYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTY 503 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++ + + + G + + + + +P +AP + ++I + + Sbjct: 504 VGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV--EAHS 560 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +I RL G V DD E++G + + P Q++VG K + D+ V ++ Sbjct: 561 EYAYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKVPYQLVVGDKEMEDATVNVRRYG 620 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L I+ + N Sbjct: 621 SKETSVEDLSIFIDSMAAEVHNY 643 >gi|229019800|ref|ZP_04176603.1| Threonyl-tRNA synthetase [Bacillus cereus AH1273] gi|229026025|ref|ZP_04182408.1| Threonyl-tRNA synthetase [Bacillus cereus AH1272] gi|228735241|gb|EEL85853.1| Threonyl-tRNA synthetase [Bacillus cereus AH1272] gi|228741525|gb|EEL91722.1| Threonyl-tRNA synthetase [Bacillus cereus AH1273] Length = 645 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 79/433 (18%), Positives = 168/433 (38%), Gaps = 30/433 (6%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L T + +G+ WLP G + I +++ G Sbjct: 237 LRMLEEAKERDHRKLGKELKLFTN-SQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGY 295 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG ++ Y M + +++ ++ P + ++++ I SYR Sbjct: 296 DHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYR 355 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K ++ L ++ Sbjct: 356 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYK 415 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 GL++ R + ADT + + + + D++ Sbjct: 416 DFGLENYSFRLS-----------YRDPADTK--KYYADDEMWEKAQGMLKEAMDEMGLDY 462 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y DV ++ +L +++ +S ++ F ++ ++ G D Sbjct: 463 YEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERF----ELSYVGED 511 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 GK H + G + + + + +P +AP + +I + QV D + Sbjct: 512 GKQHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQAQVIPVSP--QVHLDYAK 567 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+ L + G V D E+IG + A + P ++VG V+++ V ++ Sbjct: 568 KVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVAENGVNVRKYGEQKS 627 Query: 427 EDMSLEEVINYAS 439 E ++L+ ++ Sbjct: 628 ETIALDAFVDMIK 640 >gi|194366578|ref|YP_002029188.1| threonyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3] gi|238693469|sp|B4SQH4|SYT_STRM5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|194349382|gb|ACF52505.1| threonyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3] Length = 633 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 73/443 (16%), Positives = 143/443 (32%), Gaps = 41/443 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ + ++ ++E RD + L + + + G+ W P G V +R+ Sbjct: 227 KQLEAYIKRIEEAEMRDHRRIGKQQDLF--HLQEEAPGLVFWHPKGWALWQVVEQYMRKV 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +TG E+ P + LW +SG +D+Y M + + P + +F Sbjct: 285 YRKTGYGEVRCPQILDVSLWQKSGHWDNYQDAMF-FTESEKRTYALKPMNCPGHVQVFNQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 + SYR+LP + + R+E G++R R F D + F T + Sbjct: 344 GLHSYRDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFC-TENQVEAEVTAFHQ 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L ++ G I ++ P D + + Sbjct: 403 QALAVYQHFGFDEIQVKIALRPESR-----------------LGDDATWDKAEGALRSAL 445 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + A Y + H L D++ ++ ++ G Sbjct: 446 SSNGVEWQELPGEGAFYGPKIEYH---LKDAIGRTWQLGTMQVDFMMPGRLG-------- 494 Query: 300 ATFKGAD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + + K H V + +G+M ++ H G+ W ++ Sbjct: 495 AEYVDENSQKKHPVMLHRAIVGSMERFLGILIEHHAGQFPAWLAPTQVVVANIT------ 548 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + + L+ G V D E+IG + L P +++G + + V + Sbjct: 549 DAQAEYVSDVTKTLADQGFRVSADLRNEKIGYKIREHTLQRVPYLLVIGDREKENGAVAV 608 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + R MSL+ I Sbjct: 609 RTRSGEDLGSMSLQAFIERLQAE 631 >gi|313890276|ref|ZP_07823910.1| threonine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026] gi|313121381|gb|EFR44486.1| threonine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026] Length = 648 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 75/448 (16%), Positives = 163/448 (36%), Gaps = 36/448 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L L+E RD +L L M++ + +G+ WLP G + I +++ Sbjct: 229 KAYLTRLEEAKERDHRKLGKELDLF--MVNPEVGQGLPFWLPNGATIRRTLERYITDKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P + S D + SG +D Y ++M D D + + P + ++++ H Sbjct: 287 ASGYQHVYTPPMASVDFYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNCPHHIEVYKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP ++ + R E ++ + + +TP+ + + + Sbjct: 347 VHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHLFVTPDQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSENTDFD 240 + ++ L R D + + + + + + D Sbjct: 407 IDVYKDFNLTDYRFRLS--------------YRDPNDKEKYFDNDEMWEKAQSMLKAALD 452 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 453 EMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD----L 501 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + GADG++H M G+ + I + I ++ Sbjct: 502 KYIGADGEEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQV----TVIPISNEA 557 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ L G V DD E++ + + P Q+IVG K + + V ++ Sbjct: 558 HVDYAWEVAKLLRDKGVRVDVDDRNEKMQYKIRASQTGKIPYQLIVGDKEMDEKSVNVRR 617 Query: 421 RLTGIREDMSLEEVINYASHRFS-NNRP 447 + + + +++ E ++ S +RP Sbjct: 618 YGSKVTQTVAISEFVDTILADISRKSRP 645 >gi|294141074|ref|YP_003557052.1| threonyl-tRNA synthetase [Shewanella violacea DSS12] gi|293327543|dbj|BAJ02274.1| threonyl-tRNA synthetase [Shewanella violacea DSS12] Length = 642 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 74/439 (16%), Positives = 143/439 (32%), Gaps = 40/439 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + + + G+ W G + + IR++ + Sbjct: 233 LNRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWRLFLELETFIRQKLGQYTY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y + M ++ P + IF +KSYR Sbjct: 291 QEVKGPLMMDRVLWERSGHWDKYSEAMFT-TKSENREYAIKPMNCPGHVQIFNQGLKSYR 349 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + + + Sbjct: 350 DLPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQVQQEVSACIQMVYDTY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G K+I ++ + P E D + Sbjct: 409 ETFGFKNIVVKLSTRPEQRIGDDE-----------------MWDRAEEALKQALTANDIE 451 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I+ A Y + L D L + ++ G AT+ Sbjct: 452 FEILPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDYALPGRLG--------ATYVAE 500 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D + +G++ ++ + GK W + +++ + Sbjct: 501 DNSRQTPVMIHRAILGSLERFLGILIEEYAGKFPTWLAPMQVVVMNIT------DKQSNY 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ L + G D E+IG + L P ++VG + + + +V ++ R Sbjct: 555 ADEVVNLLKENGIRASKDLRNEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRTRDGV 614 Query: 425 IREDMSLEEVINYASHRFS 443 M +EE + + S Sbjct: 615 DLGKMRIEEFAAKINKQIS 633 >gi|195978510|ref|YP_002123754.1| threonyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975215|gb|ACG62741.1| threonyl-tRNA synthetase ThrS [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 655 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 76/449 (16%), Positives = 161/449 (35%), Gaps = 38/449 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L L+E RD +L L M+ + +G+ WLP G + I +++ Sbjct: 236 KAYLTRLEEAKERDHRKLGKELDLF--MVSQEVGQGLPFWLPNGATIRRTLERYITDKEL 293 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG ++ Y ++M D D + + P + ++++H Sbjct: 294 ASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKNH 353 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP ++ + R E ++ + + +TPE + + + Sbjct: 354 VHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHLFVTPEQIQEEFQRALQLI 413 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + + + + + D+ Sbjct: 414 IDVYEDFNLTDYRFRLS-------------YRDPKDTHKYYDNDEMWENAQSMLKAALDE 460 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + +S ++ F ++ + + Sbjct: 461 MGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERF----NLS 509 Query: 302 FKGADGKDHYVQMGSYGIG--AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GADG++H M G+ R A +IE+ + I ++ Sbjct: 510 YIGADGEEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPRQ------VTVIPISNE 563 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L G DD E++ + + P Q+IVG K + D V ++ Sbjct: 564 AHIDYAWEVAKTLRDHGIRADVDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVR 623 Query: 420 HRLTGIREDMSLEEVINYASHRF-SNNRP 447 + ++ ++ +RP Sbjct: 624 RYGSKATHTEAIAAFVDNILADIARKSRP 652 >gi|169824388|ref|YP_001691999.1| threonyl-tRNA synthetase [Finegoldia magna ATCC 29328] gi|238687735|sp|B0S169|SYT_FINM2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|167831193|dbj|BAG08109.1| threonyl-tRNA synthetase [Finegoldia magna ATCC 29328] Length = 634 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 81/443 (18%), Positives = 161/443 (36%), Gaps = 39/443 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD ++ L + I + G + P G L+ + ++E+ Sbjct: 230 EYLDRMEEAKKRDHRKIGKEMGLFS--IQEEGPGFPFFHPNGMVVLNELEKFLKEQLLER 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G ++ P + + LW +SG +D Y + M + + P + +++ + S Sbjct: 288 GYGQIKTPLILNEHLWHQSGHWDHYKENM-YFTKIDGEDYAIKPMNCPGSILVYKDELHS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP ++ R EL G+ R R F+ DA+ F L PE + +K Sbjct: 347 YRELPIKVAELGQVHRHELSGALHGLFRVRTFVQDDAHVFCL-PEQIEEEVSKTIDFCDY 405 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I+ + G K + + P S E D I S + Sbjct: 406 IYSKFGFKYE-VELSTRPEDSMGSDE-----------------DWDLAISSLKNALEHKG 447 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E A Y D H E D++ + ++ F ++ + A+ Sbjct: 448 LPYKINEGDGAFYGPKIDFHLE---DAIGRTWQCGTIQLD----FQMPERFDMTYIAS-- 498 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 K + +G+ ++ + +P ++P ++ ++ I D Sbjct: 499 -DGSKKRPAMIHRAILGSEERFMGILI---EHYAGKFPLWLSPVQVEILPISDK---FND 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ ++ G V DD E+IG + + L +I+G + +++V ++ R Sbjct: 552 YAYELQQKMKARGLRVKVDDRSEKIGLKIRESQLKKVNYSLIIGQNEIDNNEVSVRKRDI 611 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 G + +E IN + N + Sbjct: 612 GDVGSKNTDEFINELVDEYQNRK 634 >gi|332992302|gb|AEF02357.1| prolyl-tRNA synthetase [Alteromonas sp. SN2] Length = 554 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 118/235 (50%), Positives = 160/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L+ V I+REE Sbjct: 1 MRTSQYLLATQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLNKVANIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ G +E+ +P +Q ADLW ESGR++ YG E+LR+ DR+ + + GPTHEEV+T + R+ Sbjct: 61 MNKAGGVEVLMPVVQPADLWEESGRWEEYGPELLRIKDRHQRDFVLGPTHEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ KFRDE+RPRFG+MR REF MKDAYSF L +Y M+ + Sbjct: 121 EISSYKQLPINLYQIQTKFRDEVRPRFGIMRGREFTMKDAYSFHLDDTCLDKTYQTMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF+R+GL + A+SG IGG+ SHEF VLA++GE + + D D+ E Sbjct: 181 YGNIFNRMGLDYRAVIADSGSIGGNHSHEFHVLAESGEDAIAFASD-SDYAANVE 234 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 69/186 (37%), Positives = 106/186 (56%), Gaps = 3/186 (1%) Query: 259 TSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 T+D+ N D+ P+ RGIEVGHIF G+KYS M+ GK + MG Sbjct: 369 TADLRNIVAGDASPDGNGTIEIKRGIEVGHIFQLGSKYSEAMNCGVLSETGKHQTLTMGC 428 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKV 375 YGIG R+VAA IE +HD GI+WPD +APFKI+LI + ++A E +Y +L + Sbjct: 429 YGIGVSRIVAAAIEQNHDKYGIMWPDPIAPFKIALIPMNMHKSHRIKEAAEALYEQLIAL 488 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV +DD E+ G F +L+G P +++G + + + ++E K+R TG ++ + L+ Sbjct: 489 GIDVLFDDRKERPGVMFNDMELIGIPHSIVIGERNLDNQQIEYKNRRTGEKQLLDLDSAK 548 Query: 436 NYASHR 441 ++ Sbjct: 549 DFVVSL 554 >gi|238757782|ref|ZP_04618965.1| Threonyl-tRNA synthetase [Yersinia aldovae ATCC 35236] gi|238704025|gb|EEP96559.1| Threonyl-tRNA synthetase [Yersinia aldovae ATCC 35236] Length = 642 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 71/442 (16%), Positives = 141/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y + M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYAEHMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDE-VNSCIKMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S + A+ + Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDDLWTRAED-----------------DLAAALTENGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ F + S A++ G Sbjct: 451 PFDYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGRLS----ASYIG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+M ++ + G W V +++ D Sbjct: 500 ENNDRQVPVMIHRAILGSMERFIGILTEEYAGFFPTWLAPVQVVVMNIT------DSQSD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L G D E+IG + L P ++ G K V K+ ++ R Sbjct: 554 YVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + V++ + Sbjct: 614 KDLGSLDVNVVVDKLLTEIRSR 635 >gi|228900981|ref|ZP_04065194.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] gi|228858679|gb|EEN03126.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] Length = 640 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 72/443 (16%), Positives = 153/443 (34%), Gaps = 40/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TP+ + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPKQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + + + V Sbjct: 501 DENNDKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVVPVSNAVHE 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 C ++ +L++ G V D E++G + A + P +++G K + V ++ Sbjct: 556 QYCSEVAHKLAQAGVRVEQDARDEKLGYKIREAQMQKVPYFLVIGDKEMESGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 E ++L+ + N Sbjct: 616 EEKSEVVALDVFVARIEEEIKNR 638 >gi|55820651|ref|YP_139093.1| threonyl-tRNA synthetase [Streptococcus thermophilus LMG 18311] gi|55822542|ref|YP_140983.1| threonyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066] gi|116627458|ref|YP_820077.1| threonyl-tRNA synthetase [Streptococcus thermophilus LMD-9] gi|73919831|sp|Q5M0T3|SYT_STRT1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|73919832|sp|Q5M5B9|SYT_STRT2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|122267944|sp|Q03LP1|SYT_STRTD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|55736636|gb|AAV60278.1| threonyl-tRNA synthetase 1 [Streptococcus thermophilus LMG 18311] gi|55738527|gb|AAV62168.1| threonyl-tRNA synthetase 1 [Streptococcus thermophilus CNRZ1066] gi|116100735|gb|ABJ65881.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Streptococcus thermophilus LMD-9] gi|312277977|gb|ADQ62634.1| Threonyl-tRNA synthetase ThrS [Streptococcus thermophilus ND03] Length = 648 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 80/447 (17%), Positives = 161/447 (36%), Gaps = 34/447 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L L+E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KAYLKRLEEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVDKEV 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 G + P + S +L+ SG +D Y ++M D D + + P + ++++ H Sbjct: 287 AAGYQHVYTPPIASVELYKTSGHWDHYREDMFPPMDMGDGEEFVLRPMNCPHHIEVYKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + + PE + + K+ Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEEEFKKILQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + AD + F + + + DD Sbjct: 407 IDVYEDFNLTDYRFRLS-----------YRDPADK--HKYFDNDEMWENAQRMLKAAVDD 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ L Sbjct: 454 MGVEYYEAEGEAAFYGPKLDI---QVKTALGKEETLSTIQLD----FLLPERFDLH---- 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + + + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRAEVDERNEKMQFKIRASQTQKIPYQLIVGDKEMKDGTVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRF-SNNRP 447 ++ E + +RP Sbjct: 619 GQKQTHTETVSEFVENILADIARKSRP 645 >gi|148826837|ref|YP_001291590.1| threonyl-tRNA synthetase [Haemophilus influenzae PittGG] gi|166223345|sp|A5UEK1|SYT_HAEIG RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|148718079|gb|ABQ99206.1| threonyl-tRNA synthetase [Haemophilus influenzae PittGG] Length = 643 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 144/445 (32%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LAEYLTRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + LW ++G + +Y +++ ++ P + IF + Sbjct: 287 QYDYQEVKGPFMMDRVLWEKTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G +I ++ + P S E D Sbjct: 405 YDIYSTFGFTNIAVKLSTRPENRIGSDE-----------------MWDRAEAGLAAALAH 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L D L + ++ AT Sbjct: 448 NGLEYEIQEGEGAFYGPKIEF---ALRDCLGREWQCGTVQLDFALPGRLD--------AT 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ +I + G W +++ Sbjct: 497 YVAEDNSRKTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPTQAVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ +LS VG V D E++G + L P ++ G K +++ KV ++ Sbjct: 551 QADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRVPYMLVCGDKEIAEGKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R ++EE ++ + Sbjct: 611 RKGADLGTFTVEEFAEILKNQVRSR 635 >gi|88859310|ref|ZP_01133950.1| threonyl-tRNA synthetase [Pseudoalteromonas tunicata D2] gi|88818327|gb|EAR28142.1| threonyl-tRNA synthetase [Pseudoalteromonas tunicata D2] Length = 636 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 136/442 (30%), Gaps = 41/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E RD L L + + G+ W G + +RE+ Sbjct: 232 YLKRLEEAEKRDHRKIGKALDL--WHWQEEAPGMVFWHNDGWSIYRELEDFVREKLREYK 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D Y M + P + IF +KSY Sbjct: 290 YEEVKGPLMMDRSLWEKSGHWDKYADAMFT-TVSEKREYAIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + + Sbjct: 349 RDLPLRMAEFGCCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVMDE-VSACIKMVYDT 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P D + Sbjct: 408 YETFGFEKIVVKLSTRPENR-----------------IGDDATWDQSEKALAEALTHNGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L+D L + ++ G AT+ Sbjct: 451 EFDYLPGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLDFALPGRLG--------ATYVA 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + +G++ ++ + G W +++ D Sbjct: 500 ENNERRTPVMIHRAILGSIERFIGILTEEYAGLFPTWLAPKQVVVMNIT------DKQAD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C I +L+K+G D E+IG + L P ++VG K V +V ++ R Sbjct: 554 YCHNIVEKLNKLGFRACADLRNEKIGFKIREHTLKRIPYLLVVGDKEVEQEEVAVRTRTG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 +++ I S N Sbjct: 614 DDLGKFKVDDFIAKLSDEIKNR 635 >gi|296127837|ref|YP_003635089.1| threonyl-tRNA synthetase [Brachyspira murdochii DSM 12563] gi|296019653|gb|ADG72890.1| threonyl-tRNA synthetase [Brachyspira murdochii DSM 12563] Length = 643 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 93/443 (20%), Positives = 166/443 (37%), Gaps = 41/443 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E RD +L L + H+ G W P G V + IR E ++ G Sbjct: 229 YLKRLKEAKERDHRKLGKELNLFS--FHEEGPGFPFWHPRGMVIYKAVESYIRNENDKRG 286 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + + +LW SG +D+Y + M + ++ P + ++ S+I SY Sbjct: 287 YVEIKTPAILNEELWHRSGHWDNYKENM-YFTEIDETKYAVKPMNCPGGLIVYNSNIHSY 345 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ R EL G+ R R F DA+ F + YL + Sbjct: 346 RDLPLRVAELGFVHRHELSGALHGLFRVRAFTQDDAHIFCTEEQLGDE-IINTIEYYLSV 404 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++ + + P S E + S D + Sbjct: 405 YKDFGFENFEIFVSTRPAKSIGSDE-----------------IWELATKSLINALDKLGI 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D + D L N + ++ F ++ +++G Sbjct: 448 KYKINEGDGAFYGPKIDF---NIKDVLDRNWQCGTLQVD----FSLPMRF----EISYEG 496 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CR 362 DG+ H + +G+M ++ ++GK +W + + + D+ Sbjct: 497 KDGRKHTPVMLHRAILGSMERFIGILVEHYNGKFPLWLS-----PLQVAVVNVLDEKSQI 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D ++ L G V D+ E +G++ L P VI+G++ VS+ K+ I+ R Sbjct: 552 DRVNEVAKALKDAGFRVETDEGNENLGTKIKKYRLQRTPYTVIIGAEEVSNGKLSIRTRS 611 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + +DM L E I Sbjct: 612 SQEIKDMDLNEFIEKLKKESKER 634 >gi|225870895|ref|YP_002746842.1| threonyl-tRNA synthetase [Streptococcus equi subsp. equi 4047] gi|225700299|emb|CAW94574.1| threonyl-tRNA synthetase [Streptococcus equi subsp. equi 4047] Length = 655 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 77/449 (17%), Positives = 162/449 (36%), Gaps = 38/449 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L L+E RD +L L MI + +G+ WLP G + I +++ Sbjct: 236 KAYLTRLEEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRTLERYITDKEL 293 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG ++ Y ++M D D + + P + ++++H Sbjct: 294 ASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKNH 353 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP ++ + R E ++ + + +TPE + + + Sbjct: 354 VHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHLFVTPEQIQEEFQRALQLI 413 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + + + + + D+ Sbjct: 414 IDVYEDFNLTDYRFRLS-------------YRDPKDTHKYYDNDEMWENAQSMLKAALDE 460 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + E A Y D+ ++ +L + +S ++ F ++ + + Sbjct: 461 MGADYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERF----NLS 509 Query: 302 FKGADGKDHYVQMGSYGIG--AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GADG++H M G+ R A +IE+ + I ++ Sbjct: 510 YIGADGEEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPRQ------VTVIPISNE 563 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L G DD E++ + + P Q+IVG K + D V ++ Sbjct: 564 AHIDYAWEVAKILRDHGIRADVDDRNEKMQYKIRASQTSKIPYQLIVGDKEMQDKSVNVR 623 Query: 420 HRLTGIREDMSLEEVINYASHRF-SNNRP 447 + ++ ++ +RP Sbjct: 624 RYGSKATHTEAISAFVDNILADIARKSRP 652 >gi|114047517|ref|YP_738067.1| threonyl-tRNA synthetase [Shewanella sp. MR-7] gi|123326545|sp|Q0HV45|SYT_SHESR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|113888959|gb|ABI43010.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Shewanella sp. MR-7] Length = 642 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 73/443 (16%), Positives = 143/443 (32%), Gaps = 40/443 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S + + + RD +L L + + + G+ W G + IR + N Sbjct: 229 LSTHLARLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWSIFLELERFIRRKLN 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + LW SG +D Y + M ++ P + IF + Sbjct: 287 QYTYQEVKGPLMMDRVLWERSGHWDKYSEAMFT-TSSENREYAVKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + + Sbjct: 346 KSYRDLPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQVQAEVSSCIQMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + G ++I ++ + P D + Sbjct: 405 YDTYSTFGFENIVVKLSTRPEKR-----------------IGDDAMWDRAEEALKQALRA 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 +I+ A Y + L D L + ++ G AT Sbjct: 448 KNIEFTILPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDYALPSRLG--------AT 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ ++ + G+ W + +++ Sbjct: 497 YVAEDNSRQTPVMIHRAILGSLERFLGILIEEYAGRFPTWLAPMQVVVMNIT------DK 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D E++ + G +D E+IG + L P ++VG + + + +V ++ Sbjct: 551 QADYVEEVVKFFKEQGIRASFDLRNEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R M +E+ + S Sbjct: 611 RDGVDLGKMRIEDFAAKIHQQIS 633 >gi|149180875|ref|ZP_01859377.1| threonyl-tRNA synthetase [Bacillus sp. SG-1] gi|148851394|gb|EDL65542.1| threonyl-tRNA synthetase [Bacillus sp. SG-1] Length = 647 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 82/442 (18%), Positives = 163/442 (36%), Gaps = 38/442 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +YFL + + R+ ++L L M + + G+ +L GQK + + + +R+ QN Sbjct: 234 EYFLFLEEAQKRNHRKLGNELELF--MFSEEAPGMPFYLNNGQKIRNELESFLRQIQNSF 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + LW +SG ++ Y + M ++ +D++ P + IF+ + S Sbjct: 292 DYEEVRTPIMMNRKLWEQSGHWEHYKENM-YFSEVDDQSFALKPMNCPGHMLIFKDKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + R E G++R R F DA+ F TP+ + Sbjct: 351 YRDLPIRMAEFGQVHRHEFSGALNGMLRVRTFCQDDAHIFV-TPDQIEEEITSALKLIDH 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G + P + D S + Sbjct: 410 VYRTFGFNYDI-ELSTRP-----------------EDYMGEEALWDKAEGSLKNVLTKLG 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 SI E A Y D+H + D+L + + + ++ F K+ + Sbjct: 452 YSFSINEGDGAFYGPKIDIH---IKDALKRSHQCATVQLD----FQMPEKF----ELHYI 500 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + + + + + +P ++P ++S+I + Sbjct: 501 DENNQKVRPVVIHRAV--FGSIDRFLGILIEHFAGAFPVWLSPLQVSVIPVSKRHHGQ-- 556 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 CE+I +RL + G V D E++G + A + P ++VG K V ++ Sbjct: 557 YCEEIRSRLKEEGLRVECDLREEKLGYKIREAQMKKAPYILVVGDKEQESQTVNVRSYGE 616 Query: 424 GIREDMSLEEVINYASHRFSNN 445 ++ LEE I + + Sbjct: 617 QNSQEEKLEEFIARVKQQIRDK 638 >gi|77164414|ref|YP_342939.1| prolyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707] gi|254434306|ref|ZP_05047814.1| prolyl-tRNA synthetase [Nitrosococcus oceani AFC27] gi|114152222|sp|Q3JCN7|SYP_NITOC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|76882728|gb|ABA57409.1| Prolyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707] gi|207090639|gb|EDZ67910.1| prolyl-tRNA synthetase [Nitrosococcus oceani AFC27] Length = 574 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 130/332 (39%), Positives = 181/332 (54%), Gaps = 3/332 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAEI SH+LMLR I + + G+Y+WLPLG + L V IIREE Sbjct: 1 MRTSQYLLTTTRETPADAEIISHQLMLRGSFIRRLAAGLYTWLPLGLRVLRKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+ +P +Q A+LW E+GR++ YG E+LR DR+ + +GPTHEEV+TD+ R Sbjct: 61 MDKAGAQEVLMPAVQPAELWRETGRWEQYGPELLRFTDRHQRFFCFGPTHEEVITDLIRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQLKFRDE+RPRFGVMRSREFLMKDAYSF +YN+M+ + Sbjct: 121 EIRSYKQLPANFYQIQLKFRDEIRPRFGVMRSREFLMKDAYSFHPDQTSLAQTYNQMYET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK---DFMDFPIPSENT 237 Y RIF R+GL ++A++G IGG SHEF VLA +GE + S + + + Sbjct: 181 YSRIFDRIGLTFRAVQADTGAIGGKTSHEFHVLAASGEDAIAFSDKSTYAANVELAAALP 240 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D S + P T ++ L + G + + Sbjct: 241 PTDKPASPKETLSLIETPGQCTIKEISQFLNIPSSRCIKTLLVQGSEGELVALALRGDHE 300 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 ++A + + + A I Sbjct: 301 LNAVKAQKLPQVANPLQFATPEQVWKTCNASI 332 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 72/192 (37%), Positives = 105/192 (54%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +T+D+ N D P+ + ARGIEVGHIF G KYS M+AT G+ + Sbjct: 377 PEPSTADIRNVVDGDPSPDGEGTLSIARGIEVGHIFQLGEKYSQAMNATVLDETGRAISL 436 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG RVVAA IE +HD GIIWP S+APF+++L+ I AH ++ +++Y Sbjct: 437 AMGCYGIGVSRVVAAAIEQNHDEHGIIWPASIAPFQLALVPINAHKSARVKEMSDRLYTE 496 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G +V DD + G FA DL+G P ++++ + + ++ VE K R G + L Sbjct: 497 LQAAGFEVLLDDRQLRPGVIFADMDLIGIPYRLVISERGLENNTVEYKRRQDGKTCAIQL 556 Query: 432 EEVINYASHRFS 443 + I+ Sbjct: 557 DNFISGLKAELK 568 >gi|75812508|ref|YP_320127.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Anabaena variabilis ATCC 29413] gi|75705264|gb|ABA24938.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Anabaena variabilis ATCC 29413] Length = 614 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 161/442 (36%), Gaps = 38/442 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y + RD +L L + I + G+ W P G + R+ + Sbjct: 206 YLKQREEALRRDHRKLGQELNLFS--IQEDAGGGLVFWHPKGAIIRYIIEDYWRKSHLES 263 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + + DLW SG +D Y + M D ++A P + ++ + S Sbjct: 264 GYQLLYTPHIANLDLWKTSGHFDFYQENMFDSMDVENQAYQIKPMNCPFHVLTYKHQLHS 323 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + ++ +R E G+MR R F DA+ F L P + + Sbjct: 324 YRELPLRWAELGTVYRYERSGALHGLMRVRGFTQDDAHVFCL-PNQIADEILGVLNLTEQ 382 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I G K+ + + P + E + + + Sbjct: 383 ILSDFGFKNYEVNLSTRPEKSVGNDE-----------------VWELATSALRQALNTKG 425 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D+ K+ D++ + S ++ F ++ + A Sbjct: 426 WNYIVDEGGGAFYGPKIDI---KIQDAIGRLWQCSTIQVD----FNLPERFDMEYIAV-- 476 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + G++ ++ + +P +AP ++ L+ + R+ Sbjct: 477 -DGSRQRPIMIHRAIFGSLERFFGILI---ENYSGDFPLWLAPVQLRLLPV---SDEVRE 529 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L K G V D GE++G Q A+L P+ +VG K V + + ++ R + Sbjct: 530 YAQLVVISLKKAGIRVETDSSGERLGKQIRTAELEKIPVVAVVGKKEVENQNLSVRTRQS 589 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G ++++E+++ ++ Sbjct: 590 GDLGVLNMDEILHRLQDAINSK 611 >gi|82751271|ref|YP_417012.1| threonyl-tRNA synthetase [Staphylococcus aureus RF122] gi|123768508|sp|Q2YTA7|SYT_STAAB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|82656802|emb|CAI81231.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus RF122] Length = 645 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 161/445 (36%), Gaps = 33/445 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD +L L T G+ WLP G + I +++ Sbjct: 229 KAHLQMLEERKERDHRKIGKELELFTN-SQLVGAGLPLWLPNGATIRREIERYIVDKEVS 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHI 122 G + P L + DL+ SG +D Y ++M ++ M+ P + I+ + Sbjct: 288 MGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPMNCPHHMMIYANKP 347 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ R E ++ + + + P+ K + ++ + Sbjct: 348 HSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMII 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDD 241 ++ G + R D + + + D + D+ Sbjct: 408 DVYKDFGFEDYSFRLS--------------YRDPEDKEKYFDDDDMWNKAENMLKEAADE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y DV ++ ++ + + +S ++ F ++ T Sbjct: 454 LGLSYEEAIGEAAFYGPKLDV---QVKTAMGKEETLSTAQLD----FLLPERFD----LT 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + G DG+ H + G + + + + +P +AP ++ +I + + Sbjct: 503 YIGQDGEHHRPVVIHR--GVVSTMERFVAFLTEETKGAFPTWLAPKQVQIIPVNV--DLH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ L G V DD E++G + A + P Q++VG K V +++V ++ Sbjct: 559 YDYARQLQDELKSQGVRVSIDDRNEKMGYKIREAQMQKTPYQIVVGDKEVENNQVNVRQY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + +E + +E I + Sbjct: 619 GSQDQETVEKDEFIWNLVDEIRLKK 643 >gi|329996732|ref|ZP_08302530.1| proline--tRNA ligase [Klebsiella sp. MS 92-3] gi|328539331|gb|EGF65355.1| proline--tRNA ligase [Klebsiella sp. MS 92-3] Length = 572 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELNSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDS-SDYAANIE 234 Score = 172 bits (436), Expect = 9e-41, Method: Composition-based stats. Identities = 70/189 (37%), Positives = 110/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ K + RGIEVGHIF GTKYS M A +G DG++ + MG Sbjct: 383 EVADIRNVVAGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSEAMKAAVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSK 374 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+YA LS Sbjct: 443 CYGIGVTRVVAAAIEQNFDDRGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELSA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++ Sbjct: 503 QGIEVLMDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDI 562 Query: 435 INYASHRFS 443 + Y Sbjct: 563 VEYLVKAIK 571 >gi|238893191|ref|YP_002917925.1| prolyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044] gi|238545507|dbj|BAH61858.1| prolyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 572 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELNSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDS-SDYAANIE 234 Score = 171 bits (434), Expect = 2e-40, Method: Composition-based stats. Identities = 69/189 (36%), Positives = 109/189 (57%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ K + RGIEVGHIF GTKYS M A +G DG++ + MG Sbjct: 383 EVADIRNVVAGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSEAMKAAVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSK 374 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y LS Sbjct: 443 CYGIGVTRVVAAAIEQNFDDRGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYTELSA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++ Sbjct: 503 QGIEVLMDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDI 562 Query: 435 INYASHRFS 443 + Y Sbjct: 563 VEYLVKAIK 571 >gi|225868159|ref|YP_002744107.1| threonyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus] gi|259516675|sp|C0MCN7|SYT_STRS7 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|225701435|emb|CAW98547.1| threonyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus] Length = 648 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 76/449 (16%), Positives = 160/449 (35%), Gaps = 38/449 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L L+E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KAYLTRLEEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRTLERYITDKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG ++ Y ++M D D + + P + ++++H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKNH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP ++ + R E ++ + + + PE + + + Sbjct: 347 VHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHLFVMPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + + + + + D+ Sbjct: 407 IDVYEDFNLTDYRFRLS-------------YRDPKDTHKYYDNDEMWENAQSMLKAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + +S ++ F ++ + + Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERF----NLS 502 Query: 302 FKGADGKDHYVQMGSYGIG--AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GADG++H M G+ R A +IE+ + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPRQ------VTVIPISNE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L G DD E++ + + P Q+IVG K + D V ++ Sbjct: 557 AHIDYAWEVAKTLRDHGIRADVDDRNEKMQYKIRASQTSKIPYQLIVGDKEMQDKSVNVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRF-SNNRP 447 + ++ ++ +RP Sbjct: 617 RYGSKATHTEAISAFVDNILADIARKSRP 645 >gi|152968789|ref|YP_001333898.1| prolyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|166980131|sp|A6T4Z7|SYP_KLEP7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|150953638|gb|ABR75668.1| prolyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 572 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELNSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDS-SDYAANIE 234 Score = 172 bits (436), Expect = 9e-41, Method: Composition-based stats. Identities = 70/189 (37%), Positives = 110/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ K + RGIEVGHIF GTKYS M A +G DG++ + MG Sbjct: 383 EVADIRNVVAGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSEAMKAAVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSK 374 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+YA LS Sbjct: 443 CYGIGVTRVVAAAIEQNFDDRGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELSA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++ Sbjct: 503 QGIEVLMDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDI 562 Query: 435 INYASHRFS 443 + Y Sbjct: 563 VEYLVKAIK 571 >gi|113970292|ref|YP_734085.1| threonyl-tRNA synthetase [Shewanella sp. MR-4] gi|117920487|ref|YP_869679.1| threonyl-tRNA synthetase [Shewanella sp. ANA-3] gi|123029660|sp|Q0HIT9|SYT_SHESM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166225501|sp|A0KWV4|SYT_SHESA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|113884976|gb|ABI39028.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Shewanella sp. MR-4] gi|117612819|gb|ABK48273.1| threonyl-tRNA synthetase [Shewanella sp. ANA-3] Length = 642 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 73/443 (16%), Positives = 143/443 (32%), Gaps = 40/443 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S + + + RD +L L + + + G+ W G + IR + N Sbjct: 229 LSTHLARLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWSIFLELERFIRRKLN 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + LW SG +D Y + M ++ P + IF + Sbjct: 287 QYTYQEVKGPLMMDRVLWERSGHWDKYSEAMFT-TSSENREYAVKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + + Sbjct: 346 KSYRDLPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQVQAEVSSCIQMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + G ++I ++ + P D + Sbjct: 405 YDTYSTFGFENIVVKLSTRPEKR-----------------IGDDAMWDRAEEALKQALRA 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 +I+ A Y + L D L + ++ G AT Sbjct: 448 NNIEFTILPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDYALPSRLG--------AT 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ ++ + G+ W + +++ Sbjct: 497 YVAEDNSRQTPVMIHRAILGSLERFLGILIEEYAGRFPTWLAPMQVVVMNIT------DK 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D E++ + G +D E+IG + L P ++VG + + + +V ++ Sbjct: 551 QADYVEEVVKFFKEQGIRASFDLRNEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R M +E+ + S Sbjct: 611 RDGVDLGKMRIEDFAAKIHQQIS 633 >gi|312863291|ref|ZP_07723529.1| threonine--tRNA ligase [Streptococcus vestibularis F0396] gi|311100827|gb|EFQ59032.1| threonine--tRNA ligase [Streptococcus vestibularis F0396] Length = 648 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 80/447 (17%), Positives = 160/447 (35%), Gaps = 34/447 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L L+E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KAYLKRLEEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVDKEV 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 G + P + S +L+ SG +D Y ++M D D + + P + ++++ H Sbjct: 287 AAGYQHVYTPPIASVELYKTSGHWDHYREDMFPPMDMGDGEEFVLRPMNCPHHIEVYKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + + PE + + K+ Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEDEFKKILQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + AD + F + + + DD Sbjct: 407 IDVYEDFNLTDYRFRLS-----------YRDPADK--HKYFDNDEMWENAQRMLKAAVDD 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ L Sbjct: 454 MGVEYYEAEGEAAFYGPKLDI---QVKTALGKEETLSTIQLD----FLLPERFDLH---- 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + + + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKELRDRGVRAEVDERNEKMQFKIRASQTQKIPYQLIVGDKEMEDGTVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRF-SNNRP 447 ++ E + +RP Sbjct: 619 GQKQTHTETVSEFVENILADIARKSRP 645 >gi|303253033|ref|ZP_07339186.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247204|ref|ZP_07529254.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302648123|gb|EFL78326.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306856262|gb|EFM88415.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 643 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 70/445 (15%), Positives = 138/445 (31%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LAEYLTRLEEAAKRDHRRIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + LW +G + +Y +++ ++ P + IF + Sbjct: 287 EYDYQEVKGPFMMDRVLWERTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIRMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G +I ++ + P D Sbjct: 405 YDIYSTFGFSNIQVKLSTRPENR-----------------IGDDAMWDRTEDGLAKALTA 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L D L + ++ A+ Sbjct: 448 NGLSYEIQEGEGAFYGPKIEF---ALRDCLDREWQCGTIQLDFALPGRLD--------AS 496 Query: 302 FKGA-DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +G+ V + +G++ +I + G W +++ Sbjct: 497 YVAEDNGRRTPVMIHRAILGSIERFIGIITEEYAGFFPTWLAPTQAVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ LS G D E++G + L P ++ G K + KV ++ Sbjct: 551 QADYVQKVTKALSDAGIRAKSDLRNEKVGFKVREHTLRRVPYMLVCGDKEIEAGKVSVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R +++E + ++ Sbjct: 611 RKGADLGTFTIDEFVEILKNQVKAR 635 >gi|163782015|ref|ZP_02177014.1| threonyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] gi|159882547|gb|EDP76052.1| threonyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] Length = 641 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 84/437 (19%), Positives = 149/437 (34%), Gaps = 42/437 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + RD L MI + G+ WLP G + +EE + G + Sbjct: 240 EEAKKRDHRKLGRDLEFF--MIDENVGAGLVLWLPRGSIYRKVLEDYWKEEHIKRGYQFV 297 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P + + LW SG + Y M + + P + I++S ++SY++LP Sbjct: 298 YTPHVGKSKLWEISGHLECYKPNMFPAMEMEGEEYYVKPMNCPFHIAIYKSKVRSYKDLP 357 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 ++ +R E+ G++R R F DA+ TPE L + Sbjct: 358 VKLAELGTVYRYEMSGVLHGLLRVRGFTQDDAHIIC-TPEQVDEVIRDTLDLALSMLKDF 416 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 G + + P S E + + +D+ I Sbjct: 417 GFDDFKIYVSTRPEDAIGSDE-----------------QWEVSENALKKAVEDLGYTYEI 459 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 E A Y DV K+ D++ + S + F ++ + T+ G D K Sbjct: 460 DEGGGAFYGPKIDV---KIRDAIGRLWQCSTIQFD----FNLPERFDM----TYVGPDNK 508 Query: 309 DHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 H M R ++E + + A + Sbjct: 509 KHRPYMIHRAFLGSIERFTGILLEHYAGLLPVWLSPTQARIVPIA-------DRHLEYGR 561 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+ +RL + G V D+ E++ ++ A+L+ P ++VG + V V ++ + G Sbjct: 562 KVLSRLQEEGFRVDMDERDERMNAKIREAELMKIPYVLVVGDREVEAGTVSVRSKKEGNL 621 Query: 427 EDMSLEEVINYASHRFS 443 MSLEE I + + Sbjct: 622 GSMSLEEFIEHLREKVE 638 >gi|322389968|ref|ZP_08063508.1| threonine--tRNA ligase [Streptococcus parasanguinis ATCC 903] gi|321143404|gb|EFX38842.1| threonine--tRNA ligase [Streptococcus parasanguinis ATCC 903] Length = 647 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 79/444 (17%), Positives = 158/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I +++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVDKEV 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 G + P + S +L+ SG +D Y ++M D D + + P + ++++ H Sbjct: 287 AAGYQHVYTPPIASVELYKTSGHWDHYREDMFPPMDMGDGEEFVLRPMNCPHHIEVYKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + + PE + + K+ Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEEEFKKILQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + DD Sbjct: 407 IDVYEDFNLTDYRFRLS-----YRDPEDKHKYFDNDEM--------WENAQRMLKAAVDD 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ L Sbjct: 454 MGVEYYEAEGEAAFYGPKLDI---QVKTALGKEETLSTIQLD----FLLPERFDLH---- 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G+ + I + + + I ++ Sbjct: 503 YIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTQKIPYQLIVGDKEMEDKAVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 E MS++ + +N Sbjct: 619 GQKETETMSVDAFVELILTDIANK 642 >gi|161621298|ref|YP_585241.2| prolyl-tRNA synthetase [Cupriavidus metallidurans CH34] gi|114152237|sp|Q1LIQ4|SYP_RALME RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 573 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 126/276 (45%), Positives = 171/276 (61%), Gaps = 3/276 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G + + V I+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGIYNYMPVGLRVIRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+S+P +Q A+LW E+GR+D G E+LRL DR+++ PT EEV+TDI R+ Sbjct: 61 MNRAGAVELSMPVIQPAELWQETGRWDKMGPELLRLKDRHERDFAVQPTSEEVVTDIART 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE RPRFG+MR REF MKDAYSFD +G K SY M+ + Sbjct: 121 EIRSYKQLPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDIDGLKASYQNMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+RIF R GL+ + A++G IGG SHEF V+ADTGE + Sbjct: 181 YVRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIADTGEDAIVYCPTSDYAANMEAAEALP 240 Query: 241 DIISLNSIVEQWTA---PYAATSDVHNEKLFDSLPE 273 + + + E+ P A + E L L Sbjct: 241 LLATRAAPAEELKKTSTPEKAKCEHVAEFLGIPLER 276 Score = 162 bits (411), Expect = 9e-38, Method: Composition-based stats. Identities = 68/172 (39%), Positives = 102/172 (59%), Gaps = 3/172 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N D+ P+ K RGIEVGH+F GT+YS M+ATF +GK + Sbjct: 381 PEPAVADLRNVVAGDASPDGKGTLDICRGIEVGHVFMLGTRYSESMNATFLDENGKTQPM 440 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 QMG YGIG R++ A IE ++D +GIIWP ++APF + + + ++ + ++I+A Sbjct: 441 QMGCYGIGVTRILGAAIEQNYDERGIIWPAAIAPFAVVVCPVGYDRNEAVKAEADRIHAE 500 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 L G DV DD GE+ G FA +L+G P +V+VG + + + KVE + R Sbjct: 501 LLAAGVDVILDDRGERPGVMFADWELIGVPHRVVVGDRGLKEGKVEYQGRRD 552 >gi|323964912|gb|EGB60378.1| prolyl-tRNA synthetase [Escherichia coli M863] gi|327255174|gb|EGE66777.1| prolyl-tRNA synthetase [Escherichia coli STEC_7v] Length = 572 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDT-SDYAANIE 234 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 113/189 (59%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 383 VVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 443 CYGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++ Sbjct: 503 QGIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDI 562 Query: 435 INYASHRFS 443 ++Y + Sbjct: 563 VDYLVKQIK 571 >gi|306815206|ref|ZP_07449355.1| prolyl-tRNA synthetase [Escherichia coli NC101] gi|305850868|gb|EFM51323.1| prolyl-tRNA synthetase [Escherichia coli NC101] Length = 572 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDT-SDYAANIE 234 Score = 174 bits (440), Expect = 4e-41, Method: Composition-based stats. Identities = 66/187 (35%), Positives = 113/187 (60%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 385 ADIRNVVAGDPSPDGQGSLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 445 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++++ Sbjct: 505 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVD 564 Query: 437 YASHRFS 443 Y + Sbjct: 565 YLVKQIK 571 >gi|218547650|ref|YP_002381441.1| prolyl-tRNA synthetase [Escherichia fergusonii ATCC 35469] gi|226701288|sp|B7LW79|SYP_ESCF3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|218355191|emb|CAQ87798.1| prolyl-tRNA synthetase [Escherichia fergusonii ATCC 35469] gi|323975637|gb|EGB70733.1| prolyl-tRNA synthetase [Escherichia coli TW10509] Length = 572 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDT-SDYAANIE 234 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 113/189 (59%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 383 EVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 443 CYGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++ Sbjct: 503 QGIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDI 562 Query: 435 INYASHRFS 443 ++Y + Sbjct: 563 VDYLVKQIK 571 >gi|170768387|ref|ZP_02902840.1| prolyl-tRNA synthetase [Escherichia albertii TW07627] gi|170122491|gb|EDS91422.1| prolyl-tRNA synthetase [Escherichia albertii TW07627] Length = 572 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDT-SDYAANIE 234 Score = 173 bits (438), Expect = 6e-41, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 112/189 (59%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 383 EVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 443 CYGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++ Sbjct: 503 QGIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDI 562 Query: 435 INYASHRFS 443 +++ Sbjct: 563 VDFLLKAIK 571 >gi|237704354|ref|ZP_04534835.1| prolyl-tRNA synthetase [Escherichia sp. 3_2_53FAA] gi|26106541|gb|AAN78727.1|AE016755_227 Prolyl-tRNA synthetase [Escherichia coli CFT073] gi|91070839|gb|ABE05720.1| prolyl-tRNA synthetase [Escherichia coli UTI89] gi|226902266|gb|EEH88525.1| prolyl-tRNA synthetase [Escherichia sp. 3_2_53FAA] Length = 590 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 19 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 78 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 79 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 138 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 139 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 198 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 199 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDT-SDYAANIE 252 Score = 174 bits (440), Expect = 4e-41, Method: Composition-based stats. Identities = 66/187 (35%), Positives = 113/187 (60%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 403 ADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 462 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 463 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 522 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++++ Sbjct: 523 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVD 582 Query: 437 YASHRFS 443 Y + Sbjct: 583 YLVKQIK 589 >gi|110640415|ref|YP_668143.1| prolyl-tRNA synthetase [Escherichia coli 536] gi|117622479|ref|YP_851392.1| prolyl-tRNA synthetase [Escherichia coli APEC O1] gi|161486316|ref|NP_752183.2| prolyl-tRNA synthetase [Escherichia coli CFT073] gi|162138494|ref|YP_539251.2| prolyl-tRNA synthetase [Escherichia coli UTI89] gi|170680577|ref|YP_001742323.1| prolyl-tRNA synthetase [Escherichia coli SMS-3-5] gi|191171415|ref|ZP_03032964.1| prolyl-tRNA synthetase [Escherichia coli F11] gi|215485356|ref|YP_002327787.1| prolyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69] gi|218557136|ref|YP_002390049.1| prolyl-tRNA synthetase [Escherichia coli S88] gi|218688070|ref|YP_002396282.1| prolyl-tRNA synthetase [Escherichia coli ED1a] gi|227884892|ref|ZP_04002697.1| proline--tRNA ligase [Escherichia coli 83972] gi|300977725|ref|ZP_07174019.1| prolyl-tRNA synthetase [Escherichia coli MS 45-1] gi|300990442|ref|ZP_07179210.1| prolyl-tRNA synthetase [Escherichia coli MS 200-1] gi|301046653|ref|ZP_07193784.1| prolyl-tRNA synthetase [Escherichia coli MS 185-1] gi|331661266|ref|ZP_08362198.1| proline--tRNA ligase [Escherichia coli TA206] gi|331681580|ref|ZP_08382217.1| proline--tRNA ligase [Escherichia coli H299] gi|114152192|sp|Q8FKZ4|SYP_ECOL6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114152193|sp|Q1RFZ4|SYP_ECOUT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|123148404|sp|Q0TLD7|SYP_ECOL5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|152112309|sp|A1A7N8|SYP_ECOK1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226699141|sp|B7MBH6|SYP_ECO45 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701285|sp|B1LGZ7|SYP_ECOSM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782899|sp|B7UJ96|SYP_ECO27 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782901|sp|B7MP55|SYP_ECO81 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|110342007|gb|ABG68244.1| prolyl-tRNA synthetase [Escherichia coli 536] gi|115511603|gb|ABI99677.1| prolyl-tRNA synthetase [Escherichia coli APEC O1] gi|170518295|gb|ACB16473.1| prolyl-tRNA synthetase [Escherichia coli SMS-3-5] gi|190908349|gb|EDV67939.1| prolyl-tRNA synthetase [Escherichia coli F11] gi|215263428|emb|CAS07748.1| prolyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69] gi|218363905|emb|CAR01570.1| prolyl-tRNA synthetase [Escherichia coli S88] gi|218425634|emb|CAR06420.1| prolyl-tRNA synthetase [Escherichia coli ED1a] gi|222032025|emb|CAP74764.1| Prolyl-tRNA synthetase [Escherichia coli LF82] gi|227838141|gb|EEJ48607.1| proline--tRNA ligase [Escherichia coli 83972] gi|294489624|gb|ADE88380.1| prolyl-tRNA synthetase [Escherichia coli IHE3034] gi|300301388|gb|EFJ57773.1| prolyl-tRNA synthetase [Escherichia coli MS 185-1] gi|300305742|gb|EFJ60262.1| prolyl-tRNA synthetase [Escherichia coli MS 200-1] gi|300409810|gb|EFJ93348.1| prolyl-tRNA synthetase [Escherichia coli MS 45-1] gi|307552047|gb|ADN44822.1| prolyl-tRNA synthetase [Escherichia coli ABU 83972] gi|307629771|gb|ADN74075.1| prolyl-tRNA synthetase [Escherichia coli UM146] gi|312944803|gb|ADR25630.1| prolyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C] gi|315285273|gb|EFU44718.1| prolyl-tRNA synthetase [Escherichia coli MS 110-3] gi|315295532|gb|EFU54858.1| prolyl-tRNA synthetase [Escherichia coli MS 153-1] gi|315300667|gb|EFU59894.1| prolyl-tRNA synthetase [Escherichia coli MS 16-3] gi|323950806|gb|EGB46683.1| prolyl-tRNA synthetase [Escherichia coli H252] gi|323955077|gb|EGB50853.1| prolyl-tRNA synthetase [Escherichia coli H263] gi|324008226|gb|EGB77445.1| prolyl-tRNA synthetase [Escherichia coli MS 57-2] gi|324014120|gb|EGB83339.1| prolyl-tRNA synthetase [Escherichia coli MS 60-1] gi|324112394|gb|EGC06371.1| prolyl-tRNA synthetase [Escherichia fergusonii B253] gi|325496126|gb|EGC93985.1| prolyl-tRNA synthetase [Escherichia fergusonii ECD227] gi|331052308|gb|EGI24347.1| proline--tRNA ligase [Escherichia coli TA206] gi|331081801|gb|EGI52962.1| proline--tRNA ligase [Escherichia coli H299] Length = 572 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDT-SDYAANIE 234 Score = 174 bits (440), Expect = 4e-41, Method: Composition-based stats. Identities = 66/187 (35%), Positives = 113/187 (60%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 385 ADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 445 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++++ Sbjct: 505 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVD 564 Query: 437 YASHRFS 443 Y + Sbjct: 565 YLVKQIK 571 >gi|315648987|ref|ZP_07902081.1| threonyl-tRNA synthetase [Paenibacillus vortex V453] gi|315275668|gb|EFU39022.1| threonyl-tRNA synthetase [Paenibacillus vortex V453] Length = 645 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 84/442 (19%), Positives = 169/442 (38%), Gaps = 37/442 (8%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L + T +G+ WLP G K + I + + R G Sbjct: 235 LHLLEEAKKRDHRKLGKELQMFT-FSQLVGQGLPIWLPNGAKLRRTLERYIVDMEERLGY 293 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L + +L+ SG ++ Y ++M + +++ ++ P + +++S + SYR Sbjct: 294 QHVYTPVLGNVELYKTSGHWEHYQEDMFPKMEMDNEELVLRPMNCPHHMMVYKSDMHSYR 353 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ ++ R E+ G+ R R + D++ F P+ K + ++ + ++ Sbjct: 354 DLPIRIAELGMQHRYEMSGALTGLHRVRAMTLNDSHIFCR-PDQIKEEFARVIQLIMTVY 412 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS-KDFMDFPIPSENTDFDDIIS 244 G+ R D +T+ + + + + + Sbjct: 413 KDFGIHDYRFRLS--------------YRDPQDTEKYFQNDEMWEMSQRMLREVVESLDM 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ +L + + +S ++ F ++ + G Sbjct: 459 PFYEAEGEAAFYGPKLDV---QIRTALGKEETLSTVQLD----FLLPERF----ELEYVG 507 Query: 305 ADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + GI G M A + + G +W V I + N D Sbjct: 508 DDGQKHRPVVIHRGILGTMERFTAFLLENFAGALPLWLSPVQVKVIPVSN------AFED 561 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L G V D E++G + A L P IVG + V ++ R Sbjct: 562 YAKEVAEKLQFAGISVEPDLRNEKLGYKIREAQLEKIPYMFIVGENEKNAGAVSVRKRGE 621 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G SL+++I + + Sbjct: 622 GDIGAQSLDDIILKLREEINTH 643 >gi|284045075|ref|YP_003395415.1| threonyl-tRNA synthetase [Conexibacter woesei DSM 14684] gi|283949296|gb|ADB52040.1| threonyl-tRNA synthetase [Conexibacter woesei DSM 14684] Length = 643 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 81/439 (18%), Positives = 144/439 (32%), Gaps = 41/439 (9%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + + RD +L L S G WLP G +++ A RE G E Sbjct: 242 RLEEAKKRDHRRLGRELKLFQ--FSAVSPGSAFWLPRGTSLWNSLVAFTREMNEPRGYQE 299 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 + P + ++LW SG +D Y + M + D+ + P + +FRS SYR L Sbjct: 300 VKTPLIFDSELWRTSGHWDKYRENMF-VTHAEDRDLAVKPMNCPGHAHLFRSQRHSYREL 358 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P + + L R+E G+MR R F DA+ F + R Sbjct: 359 PVRYSEPGLLHRNEPSGTLHGLMRVRHFAQDDAHIFCTEEQVHGEVVAC-LDLIFDTLGR 417 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 G + I + + P + E D + Sbjct: 418 FGFE-IDVELSTRPERRIGTDE-----------------MWDRAEGKLRAALEQQGLRYR 459 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 + E A Y D H + DS+ + ++ ++ T+ GAD Sbjct: 460 VNEGDGAFYGPKIDFH---VTDSIGRSWQLGTVQLDYSFP--------ERFELTYVGADD 508 Query: 308 KDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 ++H + +G+ ++ G+ +W V + + D Sbjct: 509 REHRPVMIHRAAMGSYERFIGMLIEHWAGEFPVWLAPVQAIVLPIA------DRHADYAR 562 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + A+L V DD E +G + A+L P +++G + +V ++ G Sbjct: 563 DVVAQLRAARVRVELDDRTESVGRKIRDAELQKIPYMLVIGDREREAGEVALRRHREGDE 622 Query: 427 EDMSLEEVINYASHRFSNN 445 + + E + Sbjct: 623 GSLPVAEFVARVVSETEQR 641 >gi|323698513|ref|ZP_08110425.1| threonyl-tRNA synthetase [Desulfovibrio sp. ND132] gi|323458445|gb|EGB14310.1| threonyl-tRNA synthetase [Desulfovibrio desulfuricans ND132] Length = 645 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 87/440 (19%), Positives = 158/440 (35%), Gaps = 40/440 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y + + RD +L L + + G+ W P G + R+E Sbjct: 227 LKQYLNRLEEAKKRDHRKLGKQLDLFS-FSDEVGPGMSLWHPRGMLLRAILEDFERKEHL 285 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G + P + +LW +SG YD+Y + M + +++A P + I++ I Sbjct: 286 KRGYDLVQGPIILKRELWEKSGHYDNYRENM-YFTEIDEQAYGIKPMNCLAHMIIYKRKI 344 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+LP ++++ + R E G+MR R F DA+ P+ + + Y Sbjct: 345 MSYRDLPQRYFELGVVHRHEKSGVLHGLMRVRTFTQDDAHLICR-PDQVEEEILNLIKFY 403 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I ++EF V T + + + + D Sbjct: 404 K------------------DIYALFNYEFDVELSTRPAKSIGTDEDWELATEGLRQALDK 445 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 +I E A Y D H L DS+ + + ++ F ++ Sbjct: 446 SGMPYAINEGDGAFYGPKIDFH---LRDSIGRSWQCGTIQVD----FTLPERFD----IV 494 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G DG+ H + +G++ V+ + +P +AP + L+N+ Sbjct: 495 YVGEDGERHRPVMIHRAMLGSIERFIGVLT---EHCAGAYPVWLAPVQARLLNVTDAQLD 551 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 E A L G V D E++G + A + P +++G K V V I+ Sbjct: 552 FMKKAE---AFLVSKGIRVEADTRNEKLGYKIREAQVEKVPYMLVIGDKEVEAGCVNIRS 608 Query: 421 RLTGIREDMSLEEVINYASH 440 R ++LEE Sbjct: 609 RDGEDPGMVTLEEAAQLILE 628 >gi|315026573|gb|EFT38505.1| threonyl-tRNA synthetase [Enterococcus faecalis TX2137] Length = 660 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 161/443 (36%), Gaps = 34/443 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L M+ + G+ WLP G + I +++ Sbjct: 246 FIKMREEAKERDHRKLGKELDLF--MVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISL 303 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D M + P + ++++ I Sbjct: 304 GYQHVYTPIMADVELYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIH 363 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + + + Sbjct: 364 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA 423 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ + R D T + D M + D++ Sbjct: 424 VYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKAAMDEL 469 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ F ++ T+ Sbjct: 470 ELDYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTY 518 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++ + + + G + + + + +P +AP + ++I + + Sbjct: 519 VGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV--EAHS 575 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +I RL G V DD E++G + + P Q++VG K + D+ V ++ Sbjct: 576 EYAYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKVPYQLVVGDKEMEDATVNVRRYG 635 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L I+ + N Sbjct: 636 SKETSVEDLSIFIDSMAAEVRNY 658 >gi|302380527|ref|ZP_07268992.1| threonine--tRNA ligase [Finegoldia magna ACS-171-V-Col3] gi|303234012|ref|ZP_07320661.1| threonine--tRNA ligase [Finegoldia magna BVS033A4] gi|302311470|gb|EFK93486.1| threonine--tRNA ligase [Finegoldia magna ACS-171-V-Col3] gi|302494937|gb|EFL54694.1| threonine--tRNA ligase [Finegoldia magna BVS033A4] Length = 634 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 160/443 (36%), Gaps = 39/443 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD ++ L + I + G + P G L+ + ++E+ Sbjct: 230 EYLDRMEEAKKRDHRKIGKEMGLFS--IQEEGPGFPFFHPNGMVVLNELEKFLKEQLLER 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G ++ P + + LW +SG +D Y + M + + P + +++ + S Sbjct: 288 GYGQIKTPLILNEHLWHQSGHWDHYKENM-YFTKIDGEDYAIKPMNCPGSILVYKDELHS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP ++ R EL G+ R R F+ DA+ F L + +K+ Sbjct: 347 YRELPIKVAELGQVHRHELSGALHGLFRVRTFVQDDAHVFCLPEQIEDE-VSKIIDFCDY 405 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I+ + G K + + P S E D I S + Sbjct: 406 IYSKFGFKYE-VELSTRPEDSMGSDE-----------------DWDLAISSLKNALEHKG 447 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E A Y D H E D++ + ++ F ++ + A+ Sbjct: 448 LPYKINEGDGAFYGPKIDFHLE---DAIGRTWQCGTIQLD----FQMPERFDMTYIAS-- 498 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 K + +G+ ++ + +P ++P ++ ++ I D Sbjct: 499 -DGSKKRPAMIHRAILGSEERFMGILI---EHYAGKFPLWLSPVQVEILPISDK---FND 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ ++ G V DD E+IG + + L +I+G + +++V ++ R Sbjct: 552 YAYELQQKMKARGLRVKVDDRSEKIGLKIRESQLKKVNYSLIIGQNEIDNNEVSVRKRDI 611 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 G + +E IN + N + Sbjct: 612 GDVGSKNTDEFINELVDEYQNRK 634 >gi|229169303|ref|ZP_04297013.1| Threonyl-tRNA synthetase [Bacillus cereus AH621] gi|228614066|gb|EEK71181.1| Threonyl-tRNA synthetase [Bacillus cereus AH621] Length = 645 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 80/433 (18%), Positives = 168/433 (38%), Gaps = 30/433 (6%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L T + +G+ WLP G + I +++ G Sbjct: 237 LRMLEEAKERDHRKLGKELKLFTN-SQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGY 295 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG ++ Y M + +++ ++ P + ++++ I SYR Sbjct: 296 DHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYR 355 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K ++ L ++ Sbjct: 356 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYK 415 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 GL++ R + ADT + + + + D++ Sbjct: 416 DFGLENYSFRLS-----------YRDPADTK--KYYADDEMWEKAQGMLKEAMDEMGLDY 462 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y DV ++ +L +++ +S ++ F ++ T+ G D Sbjct: 463 YEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERF----ELTYVGED 511 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 GK H + G + + + + +P +AP + +I + QV D + Sbjct: 512 GKQHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQAQVIPVSP--QVHLDYAK 567 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+ L + G V D E+IG + A + P ++VG V+++ V ++ Sbjct: 568 KVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKS 627 Query: 427 EDMSLEEVINYAS 439 E ++L+ ++ Sbjct: 628 ETIALDAFVDMIK 640 >gi|261338808|ref|ZP_05966666.1| hypothetical protein ENTCAN_05003 [Enterobacter cancerogenus ATCC 35316] gi|288318631|gb|EFC57569.1| proline--tRNA ligase [Enterobacter cancerogenus ATCC 35316] Length = 572 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 167/235 (71%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+KM+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDS-SDYAANIE 234 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 68/189 (35%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF G KYS M+A +G DG++ + MG Sbjct: 383 EVADIRNVVAGDPSPDGQGTLMIKRGIEVGHIFQLGDKYSRAMNAAVQGEDGRNQVLTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSK 374 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+YA L Sbjct: 443 CYGIGVTRVVAAAIEQNFDERGIVWPDNIAPFQVAILPMNMHKSYRVQELAEKLYAELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV DD E+ G FA +L+G P +++G + + ++E K+R +G ++ + ++ Sbjct: 503 QGVDVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDSDEIEYKYRRSGEKQMIKTGDI 562 Query: 435 INYASHRFS 443 ++Y Sbjct: 563 LDYLMKAIK 571 >gi|73542636|ref|YP_297156.1| prolyl-tRNA synthetase [Ralstonia eutropha JMP134] gi|114152236|sp|Q46X21|SYP_RALEJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|72120049|gb|AAZ62312.1| Prolyl-tRNA synthetase, bacterial [Ralstonia eutropha JMP134] Length = 573 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 130/278 (46%), Positives = 175/278 (62%), Gaps = 5/278 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G + + V I+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGIYNYMPVGLRVIRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+S+P +Q A+LW E+GR+D G E+LRL DR+++ PT EEV+TDI RS Sbjct: 61 MNRAGAVELSMPVIQPAELWQETGRWDKMGPELLRLKDRHERDFAVQPTSEEVVTDIARS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE RPRFG+MR REF MKDAYSFD EG K SY M+ + Sbjct: 121 EIRSYKQLPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDAEGLKKSYENMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y+RIF R GL+ + A++G IGG SHEF V+ADTGE + D+ E + Sbjct: 181 YVRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIADTGEDAIVYCPT-SDYAANMEAAEAL 239 Query: 240 ---DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 + + +E+ P + E L L N Sbjct: 240 PLVAERAAPTQALEKTFTPEKVKCEQVAEFLGIPLERN 277 Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 68/193 (35%), Positives = 108/193 (55%), Gaps = 3/193 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ K RGIEVGH+F GT+YS M+ATF +GK + Sbjct: 381 PEPIVADLRNVVAGDASPDGKGTLEICRGIEVGHVFMLGTRYSESMNATFLDENGKTQPM 440 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 QMG YGIG R++ A IE + D +GIIWP ++APF++ + + + + ++I+A Sbjct: 441 QMGCYGIGVTRILGAAIEQNFDERGIIWPAAIAPFEVVVCPVGYDRSEAVKAEADRIHAE 500 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD GE+ G FA +L+G P +V+VG + + + KVE + R +++ Sbjct: 501 LLAAGVDVIIDDRGERPGVMFADWELIGVPHRVVVGDRGLKEGKVEYQGRRDAQATQVAV 560 Query: 432 EEVINYASHRFSN 444 +V+ + + Sbjct: 561 ADVVGHVRGQIGK 573 >gi|311280836|ref|YP_003943067.1| prolyl-tRNA synthetase [Enterobacter cloacae SCF1] gi|308750031|gb|ADO49783.1| prolyl-tRNA synthetase [Enterobacter cloacae SCF1] Length = 572 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELNSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDT-SDYAANIE 234 Score = 171 bits (434), Expect = 2e-40, Method: Composition-based stats. Identities = 69/189 (36%), Positives = 112/189 (59%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS M+A +G DG++ + MG Sbjct: 383 EVADIRNVVAGDPSPDGQGTLMIKRGIEVGHIFQLGTKYSQAMNAAVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSK 374 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+YA L Sbjct: 443 CYGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P V++G + + + +E K+R G ++ + ++ Sbjct: 503 QGIEVLMDDRKERPGVMFADMELIGIPHTVVIGDRNLDNDDIEYKYRRNGDKQLIKTGDI 562 Query: 435 INYASHRFS 443 ++Y Sbjct: 563 LDYLVKAIK 571 >gi|225013012|ref|ZP_03703428.1| threonyl-tRNA synthetase [Flavobacteria bacterium MS024-2A] gi|225002828|gb|EEG40808.1| threonyl-tRNA synthetase [Flavobacteria bacterium MS024-2A] Length = 648 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 79/448 (17%), Positives = 162/448 (36%), Gaps = 38/448 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD +L L T + +G+ WLP G + + ++ QN Sbjct: 228 LTEYLELVEEAKKRDHRKLGKELELFT-FSQKVGQGLPLWLPKGAALRERLENFLKAAQN 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRS 120 + G ++ P + S +L++ SG Y+ YG + + + + P + +I+ + Sbjct: 287 KAGYEQVISPHIGSKELYMTSGHYEKYGADSFQPIQTPAEGEEFLLKPMNCPHHCEIYNA 346 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 SYR+LP + + +R E G+ R R F DA+ F + P + K+ Sbjct: 347 KPWSYRDLPKRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCM-PSQLDDEFKKVID 405 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L +F LG ++ + D + + + + Sbjct: 406 LVLYVFGSLGFENFTAQVSLR--------------DPEKPEKYIGSTHNWELAEQAIINA 451 Query: 240 DDIISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 +L+ ++E A Y D + D+L ++ ++ Sbjct: 452 AKEKNLDYVIETGEAAFYGPKLDFM---VKDALGRKWQLGTIQVDYNLP--------ERF 500 Query: 299 SATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 +KG+D + H + G++ A++ G +W + +NI Sbjct: 501 DLNYKGSDNELHRPVMIHRAPFGSLERFVAILLEHTGGNFPLW------LMPNQVNILCV 554 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + C++ K+ L DD E IG + +++ P +I+G K + V Sbjct: 555 SEKCKNYALKVSNFLENHEIRALLDDRNETIGKKIRESEISKVPYMIIIGEKEEENQTVS 614 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ G S E V+ + ++ Sbjct: 615 LRKHSEGDLGSFSTESVVELINTEIKSS 642 >gi|163942310|ref|YP_001647194.1| threonyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|229013779|ref|ZP_04170907.1| Threonyl-tRNA synthetase [Bacillus mycoides DSM 2048] gi|229062260|ref|ZP_04199581.1| Threonyl-tRNA synthetase [Bacillus cereus AH603] gi|229135411|ref|ZP_04264199.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST196] gi|163864507|gb|ABY45566.1| threonyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|228648054|gb|EEL04101.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST196] gi|228716988|gb|EEL68669.1| Threonyl-tRNA synthetase [Bacillus cereus AH603] gi|228747448|gb|EEL97323.1| Threonyl-tRNA synthetase [Bacillus mycoides DSM 2048] Length = 645 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 80/433 (18%), Positives = 168/433 (38%), Gaps = 30/433 (6%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L T + +G+ WLP G + I +++ G Sbjct: 237 LRMLEEAKERDHRKLGKELKLFTN-SQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGY 295 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG ++ Y M + +++ ++ P + ++++ I SYR Sbjct: 296 DHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYR 355 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K ++ L ++ Sbjct: 356 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYK 415 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 GL++ R + ADT + + + + D++ Sbjct: 416 DFGLENYSFRLS-----------YRDPADTK--KYYADDEMWEKAQGMLKEAMDEMGLDY 462 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y DV ++ +L +++ +S ++ F ++ T+ G D Sbjct: 463 YEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERF----ELTYVGED 511 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 GK H + G + + + + +P +AP + +I + QV D + Sbjct: 512 GKQHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQAQVIPVSP--QVHLDYAK 567 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+ L + G V D E+IG + A + P ++VG V+++ V ++ Sbjct: 568 KVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKS 627 Query: 427 EDMSLEEVINYAS 439 E ++L+ ++ Sbjct: 628 ETIALDAFVDMIK 640 >gi|317484633|ref|ZP_07943536.1| prolyl-tRNA synthetase [Bilophila wadsworthia 3_1_6] gi|316924107|gb|EFV45290.1| prolyl-tRNA synthetase [Bilophila wadsworthia 3_1_6] Length = 574 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 129/264 (48%), Positives = 174/264 (65%), Gaps = 3/264 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++++P L+E P DAE+ SHKL++R GMI + + GIY+WLPLG + L+ I+REE Sbjct: 1 MRWSQWYIPTLKEAPGDAEVISHKLLIRAGMIRKLTSGIYTWLPLGLRTLNKAANIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +PT+Q ADLW ESGR++ YGKE+LR DR+++ GPTHEEV+TD+ R Sbjct: 61 MDRAGAQEILMPTVQPADLWRESGRWEHYGKELLRFKDRHERDYCLGPTHEEVVTDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REFLMKDAYSFD G+ SY KMF + Sbjct: 121 EVRSYRQLPMNLYQIQTKFRDEIRPRFGLMRGREFLMKDAYSFDRDDAGADISYKKMFEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+ L+ P+ A+SG IGG+ SHEF+VLA+TGE + Sbjct: 181 YKKIFSRMALQFRPVEADSGSIGGNFSHEFMVLAETGEDTIAYCTGCDWSANIERAAVLP 240 Query: 241 DIISLNSI---VEQWTAPYAATSD 261 + +E+ T P T + Sbjct: 241 PAKACEETCSAIEEVTTPDQHTIE 264 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 71/188 (37%), Positives = 110/188 (58%), Gaps = 2/188 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + P A +D+ + D P + A+GIEVGH+F GTKYS ++A + +GK Sbjct: 372 KRDVPAFAYADLRSIAEGDVCPRCGKPVAFAKGIEVGHVFKLGTKYSTALNAIYLDENGK 431 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + + MG YGIG RVVAA IE ++DG GI +P +APF + L+N+ + +++ Sbjct: 432 EQTIIMGCYGIGVSRVVAACIEQNNDGDGIAFPPPLAPFDLELLNLDPKNADTAAKADEL 491 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 Y L+ +G DV DD E+ G +F ADL+G P+QV+VG K ++ VE+K+R TG + + Sbjct: 492 YDLLTGMGLDVLLDDREERPGVKFKDADLVGLPMQVVVGGKGLARGIVEVKNRKTGEKGE 551 Query: 429 MSLEEVIN 436 + +E Sbjct: 552 LPVEGFAE 559 >gi|283779278|ref|YP_003370033.1| threonyl-tRNA synthetase [Pirellula staleyi DSM 6068] gi|283437731|gb|ADB16173.1| threonyl-tRNA synthetase [Pirellula staleyi DSM 6068] Length = 666 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 80/443 (18%), Positives = 145/443 (32%), Gaps = 38/443 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 I + RD + +L L T I+ G+ WLP G + + +REE R G Sbjct: 237 KIEEAKRRDHRLLGKQLDLFT--INPLVGSGLILWLPKGATIRGLLESFVREELIRRGYQ 294 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P + DL+ SG + Y M + ++ + P + I++S +SYR Sbjct: 295 TVYTPHIGKVDLYRTSGHFPYYADSMFPPFVTKEEEEYLLKPMNCPHHIMIYKSKPRSYR 354 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP + R E + G+ R R F DA+ F + + + Sbjct: 355 ELPLRLAEFGTVHRYEKSGQLSGMTRVRGFTQDDAHIFCTDEQVPGE-FEGCIEMTQFVL 413 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 LGL + +R D + S++ + + + Sbjct: 414 KSLGLDNYRVRL--------------GFRDPKSDKYVGSEELWNRAQGALVEVCTRLGIE 459 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + E A Y +D + D + ++ ++ + + GA Sbjct: 460 YTAEEGEAAFYGPKADF---VVTDCIGREWQLGTVQLDYNLP------SAERFDLEYVGA 510 Query: 306 DGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D K H M R + +IE + A + Sbjct: 511 DNKIHRPVMIHRAPLGSMERFIGVLIEHFAGAFPLWLAPEQARVVTV-------SEKSEA 563 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E++G++ A L P +VG + V ++ RL Sbjct: 564 YGREVEEKLRSAGFRVSGDYRSEKLGAKIRDAQLELIPYMFVVGPRDAEQGTVSLRDRLD 623 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 G +SL + + S + + Sbjct: 624 GDLGALSLADAMQRLSDEVAERK 646 >gi|298503373|ref|YP_003725313.1| threonyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A] gi|298238968|gb|ADI70099.1| threonyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A] Length = 660 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 156/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I ++ Sbjct: 242 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVNKEL 299 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 300 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 359 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 360 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 419 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 420 IDVYEDFNLTDYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 466 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 467 MGVDYFEAEGEAAFYGPKLDI---QIKTALGKEETLSTIQLD----FLLPERFD----LK 515 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG+DH M G+ + I + + + I ++ Sbjct: 516 YIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 571 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 572 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 631 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +S++ + +N Sbjct: 632 GQKETQTVSVDNFVQAILADIANK 655 >gi|50083997|ref|YP_045507.1| prolyl-tRNA synthetase [Acinetobacter sp. ADP1] gi|81827514|sp|Q6FE23|SYP_ACIAD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|49529973|emb|CAG67685.1| prolyl-tRNA synthetase [Acinetobacter sp. ADP1] Length = 570 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 126/237 (53%), Positives = 166/237 (70%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+Y+WLP+G + L+ V AI+REE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGVRVLNKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GA+E+ +P Q A LW ESGRY YG E+LR DR+D + GPTHEEV+TD+ R+ Sbjct: 61 MNRSGALEVFMPVTQPASLWEESGRYVQYGPELLRFKDRHDNPFVLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ + Sbjct: 121 ELKSYKQLPINFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHVDQASLQETYDNMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF RLGL P++A++G IGG SHEF VLAD+GE + D+ E Sbjct: 181 YCRIFTRLGLDFRPVQADTGSIGGSGSHEFHVLADSGEDDIVF-STESDYAANVEKA 236 Score = 162 bits (411), Expect = 7e-38, Method: Composition-based stats. Identities = 71/192 (36%), Positives = 106/192 (55%), Gaps = 3/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A ++ D+ N D P+ + V RGIEVGHIF G KYS ++ T G DGK Sbjct: 379 ERDAKFSEIYDLRNVVDGDPSPDGQGVLQIKRGIEVGHIFQLGQKYSEALNCTVLGDDGK 438 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEK 367 V MG YGIG RVVA+ IE ++D KGIIWP ++APF+I+++ + A +A E Sbjct: 439 PLVVTMGCYGIGVTRVVASAIEQNYDDKGIIWPSAIAPFEIAIVPMNAHKSPKTLEAAEA 498 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +YA L G DV DD E+ G +F+ +L G P ++++G K + E K R Sbjct: 499 LYAELQAQGYDVLLDDRNERPGVKFSDLELTGIPHRIVIGEKGLDAGTFEYKGRTDAESV 558 Query: 428 DMSLEEVINYAS 439 +++ +E++ Sbjct: 559 NLTKDELLAKLK 570 >gi|228941754|ref|ZP_04104301.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974678|ref|ZP_04135244.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981272|ref|ZP_04141572.1| Threonyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228778472|gb|EEM26739.1| Threonyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228785081|gb|EEM33094.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817966|gb|EEM64044.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326942359|gb|AEA18255.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis CT-43] Length = 645 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 80/433 (18%), Positives = 169/433 (39%), Gaps = 30/433 (6%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L T + +G+ WLP G + I +++ G Sbjct: 237 LRMLEEAKERDHRKLGKELKLFTN-SQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGY 295 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG ++ Y M + +++ ++ P + ++++ I SYR Sbjct: 296 DHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYR 355 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K ++ L ++ Sbjct: 356 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYK 415 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 GL++ R + ADT + + + + D++ Sbjct: 416 DFGLENYSFRLS-----------YRDPADTK--KYYADDEMWEKAQGMLKEAMDEMGLDY 462 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y DV ++ +L +++ +S ++ F ++ T+ G D Sbjct: 463 YEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERF----ELTYVGED 511 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 GK H + G + + + + +P +AP ++ +I + QV D + Sbjct: 512 GKQHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVQVIPVSP--QVHLDYAK 567 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+ L + G V D E+IG + A + P ++VG V+++ V ++ Sbjct: 568 KVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKS 627 Query: 427 EDMSLEEVINYAS 439 E ++L+ ++ Sbjct: 628 ETIALDAFVDMIK 640 >gi|228967672|ref|ZP_04128693.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] gi|228792048|gb|EEM39629.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] Length = 645 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 80/433 (18%), Positives = 169/433 (39%), Gaps = 30/433 (6%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L T + +G+ WLP G + I +++ G Sbjct: 237 LRMLEEAKERDHRKLGKELKLFTN-SQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGY 295 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG ++ Y M + +++ ++ P + ++++ I SYR Sbjct: 296 DHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYR 355 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K ++ L ++ Sbjct: 356 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYK 415 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 GL++ R + ADT + + + + D++ Sbjct: 416 DFGLENYSFRLS-----------YRDPADTK--KYYADDEMWEKAQGMLKEAMDEMGLDY 462 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y DV ++ +L +++ +S ++ F ++ T+ G D Sbjct: 463 YEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERF----ELTYVGED 511 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 GK H + G + + + + +P +AP ++ +I + QV D + Sbjct: 512 GKQHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVQVIPVSP--QVHLDYAK 567 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+ L + G V D E+IG + A + P ++VG V+++ V ++ Sbjct: 568 KVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKS 627 Query: 427 EDMSLEEVINYAS 439 E ++L+ ++ Sbjct: 628 ETIALDAFVDMIK 640 >gi|218899729|ref|YP_002448140.1| threonyl-tRNA synthetase [Bacillus cereus G9842] gi|228903093|ref|ZP_04067229.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] gi|228910399|ref|ZP_04074214.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 200] gi|218543438|gb|ACK95832.1| threonyl-tRNA synthetase [Bacillus cereus G9842] gi|228849165|gb|EEM94004.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 200] gi|228856502|gb|EEN01026.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] Length = 645 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 80/433 (18%), Positives = 169/433 (39%), Gaps = 30/433 (6%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L T + +G+ WLP G + I +++ G Sbjct: 237 LRMLEEAKERDHRKLGKELKLFTN-SQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGY 295 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG ++ Y M + +++ ++ P + ++++ I SYR Sbjct: 296 DHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYR 355 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K ++ L ++ Sbjct: 356 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYK 415 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 GL++ R + ADT + + + + D++ Sbjct: 416 DFGLENYSFRLS-----------YRDPADTK--KYYADDEMWEKAQGMLKEAMDEMGLDY 462 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y DV ++ +L +++ +S ++ F ++ T+ G D Sbjct: 463 YEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERF----ELTYVGED 511 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 GK H + G + + + + +P +AP ++ +I + QV D + Sbjct: 512 GKQHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVQVIPVSP--QVHLDYAK 567 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+ L + G V D E+IG + A + P ++VG V+++ V ++ Sbjct: 568 KVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKS 627 Query: 427 EDMSLEEVINYAS 439 E ++L+ ++ Sbjct: 628 ETIALDAFVDMIK 640 >gi|238918575|ref|YP_002932089.1| prolyl-tRNA synthetase [Edwardsiella ictaluri 93-146] gi|259511594|sp|C5B780|SYP_EDWI9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|238868143|gb|ACR67854.1| prolyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146] Length = 572 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 128/235 (54%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L+ V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLNKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNYAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGDRPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF T E + +Y M+ + Sbjct: 121 EISSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTTQESLQETYEAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + D+ E Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVF-STASDYAANIE 234 Score = 181 bits (460), Expect = 2e-43, Method: Composition-based stats. Identities = 72/206 (34%), Positives = 121/206 (58%), Gaps = 3/206 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D I + A +D+ N D P+ K + RGIEVGHIF GTKY+ + Sbjct: 366 DGKHYFGINWERDAALPQIADIRNVIEGDPSPDGKGTLLIKRGIEVGHIFQLGTKYTEAL 425 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 +AT +G DG++ + MG YGIG RVVAA IE +HD +GIIWPD++APF+++++ + H Sbjct: 426 NATVQGEDGRNQLMTMGCYGIGVTRVVAAAIEQNHDERGIIWPDAIAPFQVAILPMNMHK 485 Query: 359 Q-VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 ++ E++Y L G +V DD E+ G FA +L+G P +++G + + ++++E Sbjct: 486 SFRVKEVAERLYDGLRAKGIEVLLDDRKERPGVMFADMELIGIPHTIVIGDRNLDNNEIE 545 Query: 418 IKHRLTGIREDMSLEEVINYASHRFS 443 K+R +G + +S++E+ + + + Sbjct: 546 YKYRRSGDKLMISVDEIEAFLQAQIA 571 >gi|119505276|ref|ZP_01627351.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2080] gi|119458967|gb|EAW40067.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2080] Length = 639 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 80/433 (18%), Positives = 146/433 (33%), Gaps = 40/433 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD + KL L + + G+ W P G + + +R++Q R Sbjct: 231 YLNRIAEAEKRDHRKIAKKLDLF--HTQEEAPGMVFWHPAGWTIYQVIESYMRKQQLRFD 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW SG D + M L D +D+ P + +F +KSY Sbjct: 289 YEEIKTPQVVDISLWQRSGHADKFASGMFTL-DADDRQFAVKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F T + + Sbjct: 348 RDLPLRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFC-TEAQIQSEVATFIDMLHEV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + R + P S+ D + D Sbjct: 407 YADFGFTEVIYRLSTRPAER-----------------VGSETDWDRAEAALAEALDAKDL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ A Y + L D + ++ ++ A + Sbjct: 450 NWEMLPGEGAFYGPKIEF---SLKDCIGRVWQLGTIQVDFSMPGRLD--------AQYVA 498 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG V + +G+ ++ ++G+ +W S + I Sbjct: 499 EDGSRQVPVMLHRAVLGSFERFIGILIEHYEGEFPLWLASQQAI---VAPITDK---QGA 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ A L + G V D E+IG + +L PL ++VG K ++ V ++ R Sbjct: 553 YAQQVAADLKEAGFRVGTDLRNEKIGFKIREHELAKVPLVLVVGDKEMAAGTVAVRGRHG 612 Query: 424 GIREDMSLEEVIN 436 ++L ++ Sbjct: 613 ADLGSLNLAALMQ 625 >gi|225857248|ref|YP_002738759.1| threonyl-tRNA synthetase [Streptococcus pneumoniae P1031] gi|254783542|sp|C1CLX1|SYT_STRZP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|225725171|gb|ACO21023.1| threonyl-tRNA synthetase [Streptococcus pneumoniae P1031] Length = 647 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 76/443 (17%), Positives = 155/443 (34%), Gaps = 31/443 (6%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L + +E RD +L L + + +G+ WLP G + I ++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLFI-ISQEVGQGLPFWLPNGATIRRELERYIVNKELA 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHI 122 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H+ Sbjct: 288 SGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHV 347 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP +I + R E ++ + + +TPE + + + + Sbjct: 348 HSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLII 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ L R + D E + D++ Sbjct: 408 DVYEDFNLTDYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDEM 454 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y D+ ++ +L + + +S ++ F ++ + Sbjct: 455 GVNYFEAEGEAAFYGPKLDI---QIKTALGKEETLSTIQLD----FLLPERFD----LKY 503 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 GADG+DH M G+ + I + + + I ++ Sbjct: 504 IGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKHV 559 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 560 DYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRYG 619 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + +S++ + +N Sbjct: 620 QKETQTVSVDNFVQAILADIANK 642 >gi|168493529|ref|ZP_02717672.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06] gi|183576436|gb|EDT96964.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06] Length = 647 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 156/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I ++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELEHYIVNKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYEDFNLTDYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QIKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG+DH M G+ + I + + + I ++ Sbjct: 503 YIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +S++ + +N Sbjct: 619 GQKETQTVSVDNFVQAILADIANK 642 >gi|150018038|ref|YP_001310292.1| threonyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] gi|149904503|gb|ABR35336.1| threonyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] Length = 635 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 85/440 (19%), Positives = 158/440 (35%), Gaps = 39/440 (8%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L T + G LP G + + R+ G Sbjct: 232 LHNLEEAKKRDHRKLGKELKLFT--FAEEGPGFPFMLPKGVILKNTLIDFWRKLHYEDGY 289 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 +E+ P + + LW SG + Y + M + +++ P + +++S SYR Sbjct: 290 VEIETPIMLNKKLWETSGHWYHYRENMYTSS-IDEEEFALKPMNCPGGMLVYKSESHSYR 348 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 + P ++ R EL G+MR R F DA+ F L + + +++ Sbjct: 349 DFPMRVGELGRVHRHELSGALHGLMRVRAFTQDDAHIFMLPDQIKSE-IKGVINLIDKVY 407 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + G K + + P S E + S D++ Sbjct: 408 SKFGFKYN-LELSTRPEDSMGSDE-----------------EWELAESSLKGALDELNLE 449 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y D H E DS+ + ++ F ++ + G+ Sbjct: 450 YKINEGDGAFYGPKIDFHLE---DSIGRTWQCGTIQLD----FQLPQRF----ELEYVGS 498 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DG+ H + + + I + +P ++P ++ ++ I Sbjct: 499 DGEKHRPIVIHRVV--FGSIERFIGILIEHFAGKFPTWLSPVQVKILPISNK---FNSYS 553 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 EKI +LS G V D E+IG + A P +IVG K +++ + ++ R G Sbjct: 554 EKIKDKLSSEGIRVEIDQKDEKIGYKIREARNERVPYIIIVGEKEAAENNISLRSRSNGD 613 Query: 426 REDMSLEEVINYASHRFSNN 445 ++LE++I ++ N Sbjct: 614 EGTLNLEDLIERINNEVKNK 633 >gi|22125796|ref|NP_669219.1| threonyl-tRNA synthetase [Yersinia pestis KIM 10] gi|45442011|ref|NP_993550.1| threonyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001] gi|51596666|ref|YP_070857.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953] gi|108807773|ref|YP_651689.1| threonyl-tRNA synthetase [Yersinia pestis Antiqua] gi|108812050|ref|YP_647817.1| threonyl-tRNA synthetase [Yersinia pestis Nepal516] gi|145598020|ref|YP_001162096.1| threonyl-tRNA synthetase [Yersinia pestis Pestoides F] gi|149365658|ref|ZP_01887693.1| threonyl-tRNA synthetase [Yersinia pestis CA88-4125] gi|153950233|ref|YP_001400689.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758] gi|162420291|ref|YP_001607032.1| threonyl-tRNA synthetase [Yersinia pestis Angola] gi|165927513|ref|ZP_02223345.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. F1991016] gi|165939479|ref|ZP_02228025.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. IP275] gi|166011794|ref|ZP_02232692.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. E1979001] gi|166210452|ref|ZP_02236487.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. B42003004] gi|167400748|ref|ZP_02306254.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167424849|ref|ZP_02316602.1| threonyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170024059|ref|YP_001720564.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII] gi|186895722|ref|YP_001872834.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+] gi|218929522|ref|YP_002347397.1| threonyl-tRNA synthetase [Yersinia pestis CO92] gi|229837960|ref|ZP_04458119.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895121|ref|ZP_04510297.1| threonyl-tRNA synthetase [Yersinia pestis Pestoides A] gi|229898521|ref|ZP_04513666.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India 195] gi|229902362|ref|ZP_04517482.1| threonyl-tRNA synthetase [Yersinia pestis Nepal516] gi|270490458|ref|ZP_06207532.1| threonine--tRNA ligase [Yersinia pestis KIM D27] gi|294503566|ref|YP_003567628.1| threonyl-tRNA synthetase [Yersinia pestis Z176003] gi|22654122|sp|Q8ZDW5|SYT_YERPE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|73919846|sp|Q669Z0|SYT_YERPS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|122979581|sp|Q1C728|SYT_YERPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|122980145|sp|Q1CIG3|SYT_YERPN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166225518|sp|A4TIL1|SYT_YERPP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166987327|sp|A7FHG1|SYT_YERP3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238687259|sp|A9R0A8|SYT_YERPG RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238688418|sp|B1JJ17|SYT_YERPY RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238691408|sp|B2K668|SYT_YERPB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|21958722|gb|AAM85470.1|AE013793_6 threonine tRNA synthetase [Yersinia pestis KIM 10] gi|45436874|gb|AAS62427.1| threonyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001] gi|51589948|emb|CAH21580.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953] gi|108775698|gb|ABG18217.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Yersinia pestis Nepal516] gi|108779686|gb|ABG13744.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Yersinia pestis Antiqua] gi|115348133|emb|CAL21061.1| threonyl-tRNA synthetase [Yersinia pestis CO92] gi|145209716|gb|ABP39123.1| threonyl-tRNA synthetase [Yersinia pestis Pestoides F] gi|149292071|gb|EDM42145.1| threonyl-tRNA synthetase [Yersinia pestis CA88-4125] gi|152961728|gb|ABS49189.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758] gi|162353106|gb|ABX87054.1| threonyl-tRNA synthetase [Yersinia pestis Angola] gi|165912528|gb|EDR31159.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. IP275] gi|165920568|gb|EDR37845.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. F1991016] gi|165989259|gb|EDR41560.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. E1979001] gi|166207632|gb|EDR52112.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. B42003004] gi|167049601|gb|EDR61009.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056036|gb|EDR65814.1| threonyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750593|gb|ACA68111.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII] gi|186698748|gb|ACC89377.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+] gi|229680697|gb|EEO76793.1| threonyl-tRNA synthetase [Yersinia pestis Nepal516] gi|229688069|gb|EEO80140.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India 195] gi|229694326|gb|EEO84373.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701883|gb|EEO89906.1| threonyl-tRNA synthetase [Yersinia pestis Pestoides A] gi|262361608|gb|ACY58329.1| threonyl-tRNA synthetase [Yersinia pestis D106004] gi|262365651|gb|ACY62208.1| threonyl-tRNA synthetase [Yersinia pestis D182038] gi|270338962|gb|EFA49739.1| threonine--tRNA ligase [Yersinia pestis KIM D27] gi|294354025|gb|ADE64366.1| threonyl-tRNA synthetase [Yersinia pestis Z176003] gi|320015090|gb|ADV98661.1| threonyl-tRNA synthetase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 642 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 72/442 (16%), Positives = 141/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y + M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYAEHMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHVFCTEEQVRDE-VNSCIKMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E A+ + Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDELWTRAED-----------------DLAAALTENGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ F + S A++ G Sbjct: 451 PFDYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGRLS----ASYIG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+M ++ + G W V +++ D Sbjct: 500 ENNDRQVPVMIHRAILGSMERFIGILTEEYAGFFPTWLAPVQVVVMNIT------DSQSD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L G D E+IG + L P ++ G K V K+ ++ R Sbjct: 554 YVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + V++ + Sbjct: 614 KDLGSLDVNVVVDQLLAEIRSR 635 >gi|302387069|ref|YP_003822891.1| threonyl-tRNA synthetase [Clostridium saccharolyticum WM1] gi|302197697|gb|ADL05268.1| threonyl-tRNA synthetase [Clostridium saccharolyticum WM1] Length = 629 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 83/438 (18%), Positives = 152/438 (34%), Gaps = 41/438 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L T M G +LP G + + R+ R Sbjct: 229 EYLTRMEEAKKRDHRKLGKELGLFTLM--DEGPGFPFFLPKGMILKNLLIDYWRKIHERE 286 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 +E+S P + S LW SG +D Y M +++ P + +++S S Sbjct: 287 RYVEISTPMMLSRKLWETSGHWDHYKDNMYT-TKIDEEDFAIKPMNCPGGLLVYKSVPHS 345 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP ++ L R E G+MR R F DA+ + + + + + Sbjct: 346 YRELPIRMGELGLVHRHEKSGALHGLMRVRCFTQDDAHIYMTQEQITDEIKGVVRLI--- 402 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + ++ V T S+ + D++ Sbjct: 403 ----------------DEVYSKFGFKYHVELSTKPENSIGSEADWEIATCGLRKALDELQ 446 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H E DS+ + ++ F ++ A + Sbjct: 447 MNYVVNEGDGAFYGPKIDFHLE---DSIGRTWQCGTIQLD----FQLPQRF----EAEYI 495 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 GADG+ H + G++ ++ GK +W V + + + Sbjct: 496 GADGEKHRPIMIHRVVFGSIERFIGILIEHFAGKFPVWLAPVQIKILPI------SEKFS 549 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++ +L K D+ E+IG + A L P +I+G K + ++ R Sbjct: 550 TYSKEVLMKLKKADIRCEMDERDEKIGYKIREAQLEKVPYMLILGEKEAETGMLSVRSRE 609 Query: 423 TGIREDMSLEEVINYASH 440 G MS+E++I+ Sbjct: 610 QGDIGIMSIEKIIDLIKS 627 >gi|225619668|ref|YP_002720925.1| threonyl-tRNA synthetase [Brachyspira hyodysenteriae WA1] gi|225214487|gb|ACN83221.1| threonyl-tRNA synthetase [Brachyspira hyodysenteriae WA1] Length = 643 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 92/442 (20%), Positives = 167/442 (37%), Gaps = 39/442 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E RD +L L + H G W P G V + IR E ++ G Sbjct: 229 YLKKLKEAKERDHRKLGKELNLFS--FHDEGPGFPFWHPRGMIIYKAVESYIRNENDKRG 286 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + + +LW SG +D+Y + M + ++ P + ++ S+I SY Sbjct: 287 YVEIKTPAILNEELWHRSGHWDNYKENM-YFTEIDETKYAVKPMNCPGGLIVYNSNIHSY 345 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ R EL G+ R R F DA+ F + YL + Sbjct: 346 RDLPLRVAELGFVHRHELSGALHGLFRVRAFTQDDAHIFCTEEQLGDE-IINTIEYYLSV 404 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++ + + P S E + S D + Sbjct: 405 YKDFGFENFEIFVSTRPAKSIGSDE-----------------IWELATKSLINALDKLKI 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D + D L N + ++ F ++ +++G Sbjct: 448 SYKINEGDGAFYGPKIDF---NIKDVLDRNWQCGTLQVD----FSLPMRF----EISYEG 496 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DGK H + +G+M ++ ++GK +W + ++++ +++ D Sbjct: 497 KDGKKHTPVMLHRAILGSMERFIGILVEHYNGKFPLWLSPLQVAVVNVL----NEKPQID 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L G V D+ + +G++ L P VI+G++ VS K+ I+ R + Sbjct: 553 RTNEVAKALKDAGFRVEVDESNDNLGTKIKKYRLQRTPYTVIIGAEEVSSGKLSIRTRSS 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 +DM L E I Sbjct: 613 QEIKDMDLNEFIEKLKKESKER 634 >gi|288937023|ref|YP_003441082.1| prolyl-tRNA synthetase [Klebsiella variicola At-22] gi|288891732|gb|ADC60050.1| prolyl-tRNA synthetase [Klebsiella variicola At-22] Length = 572 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELNSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDS-SDYAANIE 234 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 71/189 (37%), Positives = 110/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ K + RGIEVGHIF GTKYS M+A +G DG++ + MG Sbjct: 383 EVADIRNVVAGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSQAMNAAVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSK 374 YGIG RVVAA IE + D +GIIWPD++APF+++++ + H ++ EK+YA L Sbjct: 443 CYGIGVTRVVAAAIEQNFDDRGIIWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++ Sbjct: 503 HGIDVLMDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDI 562 Query: 435 INYASHRFS 443 + Y Sbjct: 563 VEYLVKAIK 571 >gi|206579512|ref|YP_002240318.1| prolyl-tRNA synthetase [Klebsiella pneumoniae 342] gi|226701300|sp|B5Y1H7|SYP_KLEP3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|206568570|gb|ACI10346.1| prolyl-tRNA synthetase [Klebsiella pneumoniae 342] Length = 572 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELNSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDS-SDYAANIE 234 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 71/189 (37%), Positives = 110/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ K + RGIEVGHIF GTKYS M+A +G DG++ + MG Sbjct: 383 EVADIRNVVAGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSQAMNAAVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSK 374 YGIG RVVAA IE + D +GIIWPD++APF+++++ + H ++ EK+YA L Sbjct: 443 CYGIGVTRVVAAAIEQNFDDRGIIWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++ Sbjct: 503 HGIDVLMDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDI 562 Query: 435 INYASHRFS 443 + Y Sbjct: 563 VEYLVKAIK 571 >gi|119470323|ref|ZP_01613082.1| prolyl-tRNA synthetase [Alteromonadales bacterium TW-7] gi|119446495|gb|EAW27770.1| prolyl-tRNA synthetase [Alteromonadales bacterium TW-7] Length = 574 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 122/237 (51%), Positives = 159/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAEI SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYILATLKETPSDAEIVSHQLMLRAGMIRRVASGLYTWLPSGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GAIEM +P +Q ADLW ESGR+ +G E++R DR+++ GPTHEEV+TD R Sbjct: 61 MDKAGAIEMLMPVIQPADLWEESGRWSEFGPELMRFTDRHNREFALGPTHEEVITDFVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP T YQ+Q K RDE RPRFGVMR+REF MKDAYSF L+ E ++Y M + Sbjct: 121 EVNSYKQLPLTLYQVQTKVRDERRPRFGVMRAREFTMKDAYSFHLSEECLNNTYQAMHKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF RLGL P+ A++G IGG +SHEF VLA++GE + S D+ E Sbjct: 181 YCNIFERLGLDYRPVIADTGSIGGSVSHEFHVLAESGEDAIAFSD-GSDYAANIEKA 236 Score = 164 bits (415), Expect = 3e-38, Method: Composition-based stats. Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 3/184 (1%) Query: 259 TSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D + RG+EVGHIF GTKYS M A DGK+ + MG Sbjct: 386 VADIRNIVEGDPSPCGQGTLQIKRGVEVGHIFQLGTKYSEAMKAGVLNEDGKNQVMTMGC 445 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKV 375 YG+G R+VAA IE ++D GIIWP S+APF ++++ + D +Y L Sbjct: 446 YGVGVSRIVAAAIEQNNDKYGIIWPQSIAPFDLAIVPMNMHKSHRIPDIANSLYQGLKDA 505 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV +DD E+ G F +L+G P +++G + + ++KVE+K+R TG + + ++ I Sbjct: 506 GVDVLFDDRKERPGVMFNDMELVGVPFTLVIGERNLDENKVELKNRRTGEKLMIDIDTAI 565 Query: 436 NYAS 439 Sbjct: 566 ESIK 569 >gi|90020556|ref|YP_526383.1| Pectate lyase/Amb allergen [Saccharophagus degradans 2-40] gi|114152247|sp|Q21MA8|SYP_SACD2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|89950156|gb|ABD80171.1| prolyl-tRNA synthetase [Saccharophagus degradans 2-40] Length = 575 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 123/235 (52%), Positives = 164/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY + +E P DAE+ SH+LMLR G+I + + G+Y+WLP G + L V I+REE Sbjct: 1 MRASKYLIATYKETPADAEVISHQLMLRAGLIRKLASGLYNWLPAGLRVLRKVETIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P +Q A+LW ESGR+ YG E+LR+ DR+D+A GPTHEEV+TD+ R+ Sbjct: 61 MDRAGAQEVLMPVVQPAELWEESGRWQQYGPELLRINDRHDRAFCLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF + E + +Y+ M + Sbjct: 121 ELKSYKQLPANFYQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHASQECLQETYDIMHAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL P+ A++G IGG SHEF VLAD+GE + +F E Sbjct: 181 YCKIFDRIGLDYRPVLADTGSIGGTGSHEFHVLADSGEDDIAF-STESNFAANVE 234 Score = 160 bits (404), Expect = 5e-37, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 115/212 (54%), Gaps = 4/212 (1%) Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSL 296 + + A D+ N + D P K RGIEVGHIF GTKYS Sbjct: 364 ANKDGYHYTNANWSDAAEHKVVDIRNVVIGDPSPCGKGTIDIKRGIEVGHIFQLGTKYSE 423 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 M A+ +GKD + MG YGIG R+VA+ IE ++D GIIWPD++APF ++++ I Sbjct: 424 AMKASVLDENGKDKTMIMGCYGIGVSRIVASAIEQNYDDNGIIWPDAIAPFHVAIVPINM 483 Query: 357 -HDQVCRDACEKIYARLSKVGCDVFW-DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 + CE++YA+L+++G DV D+ ++G A +L+G P +++VG + + Sbjct: 484 QKSEAVAQKCEELYAQLNQLGYDVLLMDEPKARLGGMLADTELMGIPHRIVVGDRGLEKG 543 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 ++E K R +D++++++I + ++ + Sbjct: 544 QLEYKCRRDSDSQDIAVDDIIEFINNAVKTGK 575 >gi|114563199|ref|YP_750712.1| threonyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400] gi|122299726|sp|Q082E1|SYT_SHEFN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|114334492|gb|ABI71874.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400] Length = 642 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 73/439 (16%), Positives = 142/439 (32%), Gaps = 40/439 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + + RD +L L + + + G+ W G + IR++ + Sbjct: 233 LVRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWSIFLELEKFIRQKLGQYTY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y + M + ++ P + IF +KSYR Sbjct: 291 QEVKGPLMMDRVLWERSGHWDKYAEAMFT-TNSENREYAIKPMNCPGHVQIFNQGLKSYR 349 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F + + + + Sbjct: 350 DLPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHVFCTDDQVQEE-VSACIQMVYDTY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +I ++ + P D D + + Sbjct: 409 ATFGFDNIVVKLSTRPEKR-----------------IGDDDMWDRAEDALKQALANNNIK 451 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I+ A Y + L D L + ++ G AT+ Sbjct: 452 YEILPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDYALPTRLG--------ATYVAE 500 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D + +G++ ++ + GK W + +++ D Sbjct: 501 DNSRQTPVMIHRAILGSLERFIGILIEEYAGKFPTWLAPMQVVVMNIT------DKQADY 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E+I + G +D E+IG + L P ++VG + + + +V ++ R Sbjct: 555 VEEIVKFFKEQGIRASFDLRNEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRTRDGI 614 Query: 425 IREDMSLEEVINYASHRFS 443 + LE+ + S Sbjct: 615 DLGKLKLEDFAAMIRQQIS 633 >gi|229549033|ref|ZP_04437758.1| threonyl-tRNA synthetase [Enterococcus faecalis ATCC 29200] gi|312904390|ref|ZP_07763551.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0635] gi|229305826|gb|EEN71822.1| threonyl-tRNA synthetase [Enterococcus faecalis ATCC 29200] gi|310632289|gb|EFQ15572.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0635] gi|315162804|gb|EFU06821.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0645] gi|315576849|gb|EFU89040.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0630] Length = 660 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 78/443 (17%), Positives = 162/443 (36%), Gaps = 34/443 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L M+ + G+ WLP G + I +++ R Sbjct: 246 FIKMREEAKERDHRKLGKELDLF--MVSQEVGSGLPFWLPKGATIRRTIERYIVDKEIRL 303 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D M + P + ++++ I Sbjct: 304 GYQHVYTPIMADVELYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIH 363 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + + + Sbjct: 364 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA 423 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ + R D T + D M + D++ Sbjct: 424 VYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKAAMDEL 469 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ F ++ T+ Sbjct: 470 ELDYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTY 518 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++ + + + G + + + + +P +AP + ++I + + Sbjct: 519 VGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV--EAHS 575 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +I RL G V DD E++G + + P Q++VG K + D+ V ++ Sbjct: 576 EYAYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKVPYQLVVGDKEMEDATVNVRRYG 635 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L I+ + N Sbjct: 636 SKETSVEDLSIFIDSMAAEVHNY 658 >gi|257094575|ref|YP_003168216.1| prolyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047099|gb|ACV36287.1| prolyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 574 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 128/235 (54%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FL L+E P DAEI SH+LMLR GMI + + GIY+W+P+G + + V I+REE Sbjct: 1 MRTSRFFLSTLKEAPSDAEIISHQLMLRAGMIKRLAGGIYTWMPIGLRVMRKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GAIE+S+P +Q A+LW ESGR++ YG E+LR DR+ + + GPTHEEV+TD+ R Sbjct: 61 MDRAGAIELSMPAVQPAELWQESGRWEKYGPELLRCKDRHQRDFVIGPTHEEVITDVVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP FYQ+Q+KFRDE+RPRFGVMR REFLMKD YSF E + Y MF + Sbjct: 121 EVKSYRQLPLHFYQVQVKFRDEIRPRFGVMRGREFLMKDGYSFHSGFEDLQREYRNMFET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL+ + A++G IGG SHEF VLAD+GE + D DF E Sbjct: 181 YTRIFTRLGLQFRAVAADTGAIGGTGSHEFHVLADSGEDALAYCPD-SDFAANVE 234 Score = 162 bits (411), Expect = 8e-38, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 103/189 (54%), Gaps = 3/189 (1%) Query: 257 AATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A +D+ N D P+ + RGIEVGHIF T+Y+ + TF G+ ++M Sbjct: 383 AVVADLRNVVAGDPSPDGRGTLELCRGIEVGHIFQLRTRYAEALKCTFLDESGQSRVMEM 442 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLS 373 G YGIG R+V A IE HD +GI++P ++APF++ ++ + A Q RDA + +Y L Sbjct: 443 GCYGIGVTRIVGAAIEQGHDERGIVFPAAIAPFEVCIVPMGYAKSQAVRDAADALYGELM 502 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G DV DD E+ G FA +L+G P +V+VG + ++ K+E K R+ + + Sbjct: 503 REGIDVLLDDRNERPGVMFAEMELIGVPHRVVVGERGLAQGKLEYKGRVDSESQMLPAAT 562 Query: 434 VINYASHRF 442 + + R Sbjct: 563 LGRFLKDRL 571 >gi|148984063|ref|ZP_01817358.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71] gi|147923352|gb|EDK74465.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71] gi|301800452|emb|CBW33086.1| threonyl-tRNA synthetase [Streptococcus pneumoniae OXC141] Length = 647 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 156/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I ++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVNKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYEDFNLTEYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QIKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG+DH M G+ + I + + + I ++ Sbjct: 503 YIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVVKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +S++ + +N Sbjct: 619 GQKETQTVSVDNFVQAILADIANK 642 >gi|332534597|ref|ZP_08410430.1| prolyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505] gi|332035947|gb|EGI72427.1| prolyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505] Length = 574 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 124/237 (52%), Positives = 159/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAEI SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYILATLKETPSDAEIVSHQLMLRAGMIRRVASGLYTWLPSGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GAIEM +P +Q ADLW ESGR++ +G E++R DR+++ GPTHEEV+TD R Sbjct: 61 MDKAGAIEMLMPVIQPADLWEESGRWNEFGPELMRFTDRHNRTFALGPTHEEVITDFVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP T YQ+Q K RDE RPRFGVMR+REF MKDAYSF L+ E +Y M + Sbjct: 121 EISSYKQLPVTLYQVQTKVRDERRPRFGVMRAREFTMKDAYSFHLSEECLDATYQAMHKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF RLGL P+ A++G IGG LSHEF VLA++GE + S D+ E Sbjct: 181 YCNIFERLGLDYRPVLADTGSIGGSLSHEFHVLAESGEDAIAFSD-GSDYAANIEKA 236 Score = 168 bits (426), Expect = 2e-39, Method: Composition-based stats. Identities = 66/198 (33%), Positives = 98/198 (49%), Gaps = 1/198 (0%) Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 + T A E + RGIEVGHIF GTKYS M A Sbjct: 376 NWDRDVTDYEVADIRNIVEGDMSPCGQGVLQIKRGIEVGHIFQLGTKYSEAMKAGVLNEG 435 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDAC 365 GK+ + MG YGIG R+VAA IE ++D GIIWP S+APF ++++ + D Sbjct: 436 GKNQTMTMGCYGIGVSRIVAAAIEQNNDQYGIIWPQSIAPFDLAIVPMNMHKSHRIPDIA 495 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +Y L G DV +DD E+ G F +L+G P +++G + + ++KVE+K+R TG Sbjct: 496 NNLYQGLKDAGLDVLFDDRKERPGVMFNDMELIGVPFTLVIGERNLDENKVELKNRRTGE 555 Query: 426 REDMSLEEVINYASHRFS 443 + + ++ I+ Sbjct: 556 KLMIDIDTAIDAIKAAVK 573 >gi|257420184|ref|ZP_05597178.1| threonyl-tRNA synthetase [Enterococcus faecalis T11] gi|257162012|gb|EEU91972.1| threonyl-tRNA synthetase [Enterococcus faecalis T11] Length = 645 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 161/443 (36%), Gaps = 34/443 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L M+ + G+ WLP G + I +++ Sbjct: 231 FIKMREEAKERDHRKLGKELDLF--MVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISL 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D M + P + ++++ I Sbjct: 289 GYQHVYTPIMADVELYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIH 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + + + Sbjct: 349 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA 408 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ + R D T + D M + D++ Sbjct: 409 VYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKAAMDEL 454 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ F ++ T+ Sbjct: 455 ELDYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTY 503 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++ + + + G + + + + +P +AP + ++I + + Sbjct: 504 VGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV--EAHS 560 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +I RL G V DD E++G + + P Q++VG K + D+ V ++ Sbjct: 561 EYAYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKVPYQLVVGDKEMEDATVNVRRYG 620 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L I+ + N Sbjct: 621 SKETSVEDLSIFIDSMAAEVHNY 643 >gi|320084496|emb|CBY94289.1| Prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 572 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ I GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFILGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S D+ E Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSD-VSDYAANIE 234 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 383 VVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 443 CYGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + ++ Sbjct: 503 QGIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDI 562 Query: 435 INYASHRFS 443 ++Y Sbjct: 563 VDYLVKAIK 571 >gi|319426373|gb|ADV54447.1| threonyl-tRNA synthetase [Shewanella putrefaciens 200] Length = 642 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 73/443 (16%), Positives = 143/443 (32%), Gaps = 40/443 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S + + + RD +L L + + + G+ W G + IR + N Sbjct: 229 LSTHLTRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWSIFLELERFIRRKLN 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + LW SG +D Y + M ++ P + IF + Sbjct: 287 QYTYQEVKGPLMMDRVLWERSGHWDKYSEAMFT-TSSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + + Sbjct: 346 KSYRDLPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQVQEEVSACIQMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + G ++I ++ + P D + Sbjct: 405 YDTYSTFGFENIVVKLSTRPEKR-----------------IGDDAMWDRAEEALKQALRA 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 +++ A Y + L D L + ++ G AT Sbjct: 448 NNIEFTLLPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDYALPNRLG--------AT 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ ++ + G+ W + +++ Sbjct: 497 YVAEDNSRQTPVMIHRAILGSLERFLGILIEEYAGRFPTWLAPMQVVVMNIT------DK 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++I + G +D E+IG + L P ++VG + + + +V ++ Sbjct: 551 QADYVQEIVKFFKEQGIRASFDLRNEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R M LE+ + S Sbjct: 611 RDGIDLGKMRLEDFATKIHQQIS 633 >gi|113869200|ref|YP_727689.1| prolyl-tRNA synthetase [Ralstonia eutropha H16] gi|123133602|sp|Q0K6Q0|SYP_RALEH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|113527976|emb|CAJ94321.1| Prolyl-tRNA synthetase [Ralstonia eutropha H16] Length = 573 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 127/276 (46%), Positives = 170/276 (61%), Gaps = 3/276 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G + + V I+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGIYNYMPIGLRVIRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+S+P +Q A+LW E+GR+D G E+LRL DR+++ PT EEV+TDI RS Sbjct: 61 MNRAGAVELSMPVIQPAELWQETGRWDKMGPELLRLKDRHERDFAVQPTSEEVVTDIARS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE RPRFG+MR REF MKDAYSFD +G + SY M+ + Sbjct: 121 EIRSYKQLPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDTDGLRKSYENMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+RIF R GL+ + A++G IGG SHEF V+ADTGE + Sbjct: 181 YVRIFRRFGLEFRAVAADNGAIGGSGSHEFHVIADTGEDAIVYCPTSDYAANMEAAEALP 240 Query: 241 DIISLNSIVEQWTA---PYAATSDVHNEKLFDSLPE 273 + S + E P A + E L L Sbjct: 241 LLASRAAPAEDLVKTATPEKAKCEHVAEFLGIPLQR 276 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 109/193 (56%), Gaps = 3/193 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ + RGIEVGH+F GT+YS M+ATF +GK + Sbjct: 381 PEPVVADLRNVVAGDASPDGQGTLEICRGIEVGHVFMLGTRYSESMNATFLDENGKTQPM 440 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 QMG YGIG R++ A IE + D +GIIWP ++APF + + + + + ++I+A Sbjct: 441 QMGCYGIGVTRILGAAIEQNFDERGIIWPAAIAPFAVVICPVGYDRSEAVKAEADRIHAE 500 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD GE+ G FA +L+G P +V+VG + + + KVE + R +S+ Sbjct: 501 LLAAGVDVILDDRGERPGVMFADWELIGVPHRVVVGDRGLKEGKVEYQGRRDAQATAVSV 560 Query: 432 EEVINYASHRFSN 444 +V+ + + +N Sbjct: 561 ADVVGHVRSQLAN 573 >gi|295098681|emb|CBK87771.1| prolyl-tRNA synthetase, family II [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 572 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 167/235 (71%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+KM+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDKMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDS-SDYAANIE 234 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 70/189 (37%), Positives = 112/189 (59%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ K + RGIEVGHIF G KYS M+A +G DG++ + MG Sbjct: 383 EVADIRNVVAGDPSPDGKGTLMIKRGIEVGHIFQLGDKYSRAMNAAVQGEDGRNQVLTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSK 374 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+YA LS Sbjct: 443 CYGIGVTRVVAAAIEQNYDERGIVWPDNIAPFQVAILPMNMHKSYRVQELAEKLYAELSA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV DD E+ G FA +L+G P +++G + + ++E K+R G ++ + ++ Sbjct: 503 KGIDVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDSDEIEYKYRRNGEKQMIKTGDI 562 Query: 435 INYASHRFS 443 ++Y Sbjct: 563 LDYLVKAIK 571 >gi|149182849|ref|ZP_01861310.1| threonyl-tRNA synthetase [Bacillus sp. SG-1] gi|148849464|gb|EDL63653.1| threonyl-tRNA synthetase [Bacillus sp. SG-1] Length = 643 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 80/438 (18%), Positives = 164/438 (37%), Gaps = 32/438 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L + +G+ WLP G + I +++ + G Sbjct: 235 LRLLEEAKERDHRKIGKELNLFMN-SQKVGQGLPMWLPKGATIRRIIERYIVDKEEKLGY 293 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P + S DL+ SG +D Y + M + D +++ ++ P + I+++ I SYR Sbjct: 294 DHVYTPVMGSVDLYKTSGHWDHYQENMFPVMDMDNEQLVLRPMNCPHHMMIYKNSIHSYR 353 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K + ++ L ++ Sbjct: 354 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHLFVRPDQIKEEFKRVVRLVLEVYK 413 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDIISL 245 L R D +T+ + D + D++ Sbjct: 414 DFDLNDYSFRLS--------------YRDPQDTEKYFDDDEMWNKAQQMLKEAMDEMEID 459 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y DV ++ +L + + +S ++ F ++ T+ G Sbjct: 460 YFEAEGEAAFYGPKLDV---QVKTALGKEETLSTVQLD----FLLPERFD----LTYIGE 508 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DGK H + G + + + + +P +AP ++ +I + V D Sbjct: 509 DGKHHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVQVIPVSP--DVHFDYA 564 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +K+ L G V D E+IG + A + P ++VG + + V ++ Sbjct: 565 KKVQEELQAQGLRVELDSRDEKIGYKIREAQMSKIPYMLVVGDNEIQEEAVNVRKYGEQK 624 Query: 426 REDMSLEEVINYASHRFS 443 E +SL + + + + Sbjct: 625 SETVSLSDFVQKVTDEVN 642 >gi|90417103|ref|ZP_01225031.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2207] gi|90331119|gb|EAS46375.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2207] Length = 574 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 121/239 (50%), Positives = 163/239 (68%), Gaps = 1/239 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y + +E+P DAE+ SH+LMLR GMI + + G+YSWLPLG + V AI+R+E Sbjct: 1 MRASQYLISTKKESPADAEVISHQLMLRAGMIRKVASGLYSWLPLGLRVFRKVEAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA+E+ +P +Q ADLW ESGR+ +G E+LR+ DR+ + GPTHEEV+TDI R+ Sbjct: 61 MDRSGALEIMMPVVQPADLWTESGRWGQFGPELLRIKDRHGREFCLGPTHEEVVTDIIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE RPRFGVMR+REF MKDAYSF + + +Y+ M+ + Sbjct: 121 EIRSYKQLPANFYQIQTKFRDERRPRFGVMRTREFCMKDAYSFHVDSASLQETYDLMYQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y IF R GL + A++G IGG +SHEF VLAD+GE + D+ E D Sbjct: 181 YSAIFDRTGLVYRAVLADTGSIGGSVSHEFHVLADSGEDAIVF-SSESDYAANIEKADA 238 Score = 154 bits (389), Expect = 3e-35, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 113/189 (59%), Gaps = 4/189 (2%) Query: 260 SDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + V RGIEVGHIF GTKYS M AT +GKD + MG Y Sbjct: 386 ADIRNVVAGDPSPDGRGVLEIKRGIEVGHIFQLGTKYSEAMKATVLDENGKDRAMSMGCY 445 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKVG 376 GIG R+VAA IE +HD GIIWP+S+APF+++++ I + + C+ +Y++L G Sbjct: 446 GIGVSRIVAAAIEQNHDDNGIIWPESIAPFQVAIVPINMHKSERVAETCQTLYSKLVSAG 505 Query: 377 CDVFW-DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +V + D+ ++G A +L+G P ++++G + ++D VE ++R + ++++++ Sbjct: 506 YEVLFMDEPKARLGGMLADIELIGIPHRIVIGDRGLADGNVEYRNRREHENQHIAMDKLD 565 Query: 436 NYASHRFSN 444 ++ + + Sbjct: 566 DFIAENIAK 574 >gi|226942102|ref|YP_002797176.1| prolyl-tRNA synthetase [Laribacter hongkongensis HLHK9] gi|226717029|gb|ACO76167.1| Syp [Laribacter hongkongensis HLHK9] Length = 569 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 135/282 (47%), Positives = 178/282 (63%), Gaps = 1/282 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFL L+E P +AE+ SHKLMLR GMI + S G+Y+W+PLG + L V AI+REE Sbjct: 1 MRASQYFLSTLKEAPNEAELPSHKLMLRAGMIKRLSSGLYTWMPLGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YGKE+LR+ DR+++ GPTHEEV+TD R Sbjct: 61 MNRAGAIELLMPAIQPAELWQESGRWEFYGKELLRVKDRHERDFCVGPTHEEVITDAVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + K +Y M+ + Sbjct: 121 EVKSYKQLPLNFYQIQTKFRDEVRPRFGVMRAREFVMKDAYSFHTDFDSLKATYQGMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y R+F RLGL P+ A++G IGG SHEF VLAD+GE + F E + Sbjct: 181 YCRVFTRLGLDFRPVAADTGSIGGTGSHEFQVLADSGEDVIAYCPT-SGFAANIELAEAV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 + Q A A L L ++ + + I Sbjct: 240 APATPRPAASQPLAKVATPGVKTMADLVAFLKQDIKTMVKAI 281 Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 3/207 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLP 297 +D + L + P +D+ N D P+ + RGIEVGH+F KY+ Sbjct: 362 EDDVHLTGVNFGRDCPEPEVADLRNVVEGDPSPDGQGEIRLCRGIEVGHVFQLRKKYAEA 421 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-A 356 M F DGK ++MG YGIG RVVAA IE D +GII+ D++APF +S++ + Sbjct: 422 MDCGFLDQDGKRQIMEMGCYGIGVSRVVAAAIEQGFDERGIIFTDAMAPFTVSIVPMGYR 481 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + A + +YA L G DV DD E+ G A ++L+G P +V++G + + + KV Sbjct: 482 RSESVKAAADALYAELVAAGVDVLLDDRDERPGVLLADSELIGIPHRVVIGDRGLKEGKV 541 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E + R + + E+ + + + Sbjct: 542 EYQGRRETEATSVEVAEIAAFVRSKLA 568 >gi|290512444|ref|ZP_06551810.1| prolyl-tRNA synthetase [Klebsiella sp. 1_1_55] gi|289774785|gb|EFD82787.1| prolyl-tRNA synthetase [Klebsiella sp. 1_1_55] Length = 583 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 12 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 71 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 72 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 131 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 132 ELNSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYTA 191 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 192 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDS-SDYAANIE 245 Score = 173 bits (439), Expect = 5e-41, Method: Composition-based stats. Identities = 71/189 (37%), Positives = 110/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ K + RGIEVGHIF GTKYS M+A +G DG++ + MG Sbjct: 394 EVADIRNVVAGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSQAMNAAVQGEDGRNQILTMG 453 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSK 374 YGIG RVVAA IE + D +GIIWPD++APF+++++ + H ++ EK+YA L Sbjct: 454 CYGIGVTRVVAAAIEQNFDDRGIIWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRA 513 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++ Sbjct: 514 HGIDVLMDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDI 573 Query: 435 INYASHRFS 443 + Y Sbjct: 574 VEYLVKAIK 582 >gi|283783983|ref|YP_003363848.1| prolyl-tRNA synthetase [Citrobacter rodentium ICC168] gi|282947437|emb|CBG86984.1| prolyl-tRNA synthetase [Citrobacter rodentium ICC168] Length = 572 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 124/235 (52%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL+ ++A++G IGG SHEF VLA +GE + S D+ E Sbjct: 181 YSKIFTRIGLEFRAVQADTGSIGGSASHEFQVLAQSGEDDIIFSDT-SDYAANIE 234 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 66/185 (35%), Positives = 112/185 (60%), Gaps = 3/185 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKAAVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+YA L Sbjct: 444 YGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 504 GIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIV 563 Query: 436 NYASH 440 ++ + Sbjct: 564 SFLVN 568 >gi|159899369|ref|YP_001545616.1| threonyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779] gi|159892408|gb|ABX05488.1| threonyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779] Length = 604 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 82/452 (18%), Positives = 155/452 (34%), Gaps = 44/452 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + RD +L L T + G+ WLP G D + +R+ Q G Sbjct: 186 YLWQQEEAKKRDHRKLGRELGLFT-FSQKVGAGLALWLPKGAILRDVLERFLRQAQIERG 244 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA---------MIYGPTHEEVMTD 116 + + P + DL+ SG + +Y + + + P + + Sbjct: 245 YLPVVTPHMGKIDLYKTSGHWYTYRDGIFPPMREIENDDTENPEGEIYLLKPMNCPHHIE 304 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 I+ S +SYR+LP + +R E G++R R F + D++ +TP+ + + Sbjct: 305 IYASEPRSYRDLPLRLAEFGTVYRYEHSGELTGLLRVRSFTVDDSH-LFVTPDQLEAEFL 363 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 K+ L +F +GLK R + L + G + S + + + Sbjct: 364 KVVDLILFVFGTMGLKDFQAR--------------VGLREVGNPKYIGSDEVWEKAQNAI 409 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 + +VE A Y D D L ++ ++ Sbjct: 410 INAAEKKGLNYIVVEGEAAFYGPKLDFI---FRDVLGRQWQLGTVQVDYNLP-------- 458 Query: 296 LPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + G DG+ H + G++ + + G +W V + + Sbjct: 459 ERFEIEYTGEDGQKHRPIMIHRAPFGSIERFVGTLIEQYAGAFPVWLAPVQVTLVPIT-- 516 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 E + A+L+ G V D ++ ++ A L P ++VG K Sbjct: 517 ----DRHVAYAESVAAKLNAQGLRVEVDASNNRMNAKIRDAQKLKIPYMLVVGDKEEEAG 572 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 V ++ R G +S++E I +N + Sbjct: 573 AVAVRQRSGGDLGSISVDEFIARIKDEVANYQ 604 >gi|322616066|gb|EFY12983.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620849|gb|EFY17709.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623800|gb|EFY20637.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627248|gb|EFY24039.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322630555|gb|EFY27319.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638227|gb|EFY34928.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322645504|gb|EFY42031.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648203|gb|EFY44670.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322657523|gb|EFY53795.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663843|gb|EFY60043.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666676|gb|EFY62854.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672166|gb|EFY68278.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676523|gb|EFY72594.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679385|gb|EFY75430.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|323193468|gb|EFZ78676.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197510|gb|EFZ82645.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201221|gb|EFZ86290.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323209616|gb|EFZ94549.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212132|gb|EFZ96956.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216437|gb|EGA01163.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223373|gb|EGA07708.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225934|gb|EGA10154.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228525|gb|EGA12654.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236862|gb|EGA20938.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239638|gb|EGA23685.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242315|gb|EGA26344.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249977|gb|EGA33873.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252407|gb|EGA36258.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255690|gb|EGA39443.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262873|gb|EGA46423.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265359|gb|EGA48855.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271854|gb|EGA55272.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 572 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S D+ E Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSD-VSDYAANIE 234 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 383 VVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 443 CYGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + ++ Sbjct: 503 QGIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDI 562 Query: 435 INYASHRFS 443 ++Y Sbjct: 563 VDYLVKAIK 571 >gi|283835256|ref|ZP_06354997.1| proline--tRNA ligase [Citrobacter youngae ATCC 29220] gi|291068967|gb|EFE07076.1| proline--tRNA ligase [Citrobacter youngae ATCC 29220] Length = 572 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDS-SDYAANIE 234 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 69/189 (36%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ K + RGIEVGHIF GTKYS M A +G DG++ + MG Sbjct: 383 EVADIRNVVAGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSEAMKAAVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSK 374 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+YA L Sbjct: 443 CYGIGVTRVVAAAIEQNYDDRGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++ Sbjct: 503 QGIEVLMDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDI 562 Query: 435 INYASHRFS 443 ++Y Sbjct: 563 VDYLVKAIK 571 >gi|224582089|ref|YP_002635887.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254782914|sp|C0Q6L7|SYP_SALPC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|224466616|gb|ACN44446.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 572 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S D+ E Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSD-VSDYAANIE 234 Score = 171 bits (434), Expect = 2e-40, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 383 VVADIRNVVAGDPSPDGEGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 443 CYGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + ++ Sbjct: 503 QGIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGKKSLIKTGDI 562 Query: 435 INYASHRFS 443 ++Y Sbjct: 563 VDYLVKAIK 571 >gi|213648168|ref|ZP_03378221.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 306 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S D+ E Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSD-VSDYAANIE 234 >gi|213423623|ref|ZP_03356603.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 322 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S D+ E Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSD-VSDYAANIE 234 >gi|168823087|ref|ZP_02835087.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205340609|gb|EDZ27373.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] Length = 572 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S D+ E Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSD-VSDYAANIE 234 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 383 VVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 443 CYGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + ++ Sbjct: 503 QGIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDI 562 Query: 435 INYASHRFS 443 ++Y Sbjct: 563 VDYLVKAIK 571 >gi|194443070|ref|YP_002039482.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197250542|ref|YP_002145247.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|226701326|sp|B5F8V6|SYP_SALA4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701335|sp|B4SV24|SYP_SALNS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|194401733|gb|ACF61955.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197214245|gb|ACH51642.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 572 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S D+ E Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSD-VSDYAANIE 234 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 383 VVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 443 CYGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + ++ Sbjct: 503 QGIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDI 562 Query: 435 INYASHRFS 443 ++Y Sbjct: 563 VDYLVKAIK 571 >gi|168235024|ref|ZP_02660082.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194735941|ref|YP_002113265.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|204926680|ref|ZP_03217882.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|226701337|sp|B4TYF5|SYP_SALSV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|194711443|gb|ACF90664.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291887|gb|EDY31237.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|204323345|gb|EDZ08540.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 572 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S D+ E Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSD-VSDYAANIE 234 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 383 VVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 443 CYGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + ++ Sbjct: 503 QGIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDI 562 Query: 435 INYASHRFS 443 ++Y Sbjct: 563 VDYLVKAIK 571 >gi|167553343|ref|ZP_02347092.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|238911308|ref|ZP_04655145.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|205322190|gb|EDZ10029.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 572 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S D+ E Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSD-VSDYAANIE 234 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 383 VVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 443 CYGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + ++ Sbjct: 503 QGIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDI 562 Query: 435 INYASHRFS 443 ++Y Sbjct: 563 VDYLVKAIK 571 >gi|161504638|ref|YP_001571750.1| prolyl-tRNA synthetase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189083510|sp|A9MPG5|SYP_SALAR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|160865985|gb|ABX22608.1| hypothetical protein SARI_02759 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 572 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S D+ E Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSD-VSDYAANIE 234 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 66/188 (35%), Positives = 111/188 (59%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 384 VADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKV 375 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 444 YGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQ 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + +++ Sbjct: 504 GIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIV 563 Query: 436 NYASHRFS 443 +Y Sbjct: 564 DYLVKAIK 571 >gi|162139614|ref|YP_215228.2| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|114152248|sp|Q57T14|SYP_SALCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|322713265|gb|EFZ04836.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 572 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S D+ E Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSD-VSDYAANIE 234 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 383 VVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 443 CYGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + ++ Sbjct: 503 QGIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGKKSLIKTGDI 562 Query: 435 INYASHRFS 443 ++Y Sbjct: 563 VDYLVKAIK 571 >gi|16759234|ref|NP_454851.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16763631|ref|NP_459246.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29140783|ref|NP_804125.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56412515|ref|YP_149590.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161612617|ref|YP_001586582.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167990131|ref|ZP_02571231.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230553|ref|ZP_02655611.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168245012|ref|ZP_02669944.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168264654|ref|ZP_02686627.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168464192|ref|ZP_02698095.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194449602|ref|YP_002044232.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194472823|ref|ZP_03078807.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197264294|ref|ZP_03164368.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197361450|ref|YP_002141086.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198242516|ref|YP_002214203.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200386929|ref|ZP_03213541.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205351579|ref|YP_002225380.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207855760|ref|YP_002242411.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213051828|ref|ZP_03344706.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213428490|ref|ZP_03361240.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580835|ref|ZP_03362661.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213865222|ref|ZP_03387341.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|81821351|sp|Q5PD80|SYP_SALPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|81832731|sp|Q7CR62|SYP_SALTY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|81849080|sp|Q8XEY9|SYP_SALTI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|189083511|sp|A9N0U7|SYP_SALPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701327|sp|B5FJ42|SYP_SALDC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701328|sp|B5R434|SYP_SALEP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701329|sp|B5R5J8|SYP_SALG2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701334|sp|B4TK70|SYP_SALHS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701336|sp|B5BAQ2|SYP_SALPK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|25293215|pir||AF0532 prolyl-tRNA synthetase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16418747|gb|AAL19205.1| proline tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16501525|emb|CAD08702.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi] gi|29136407|gb|AAO67974.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56126772|gb|AAV76278.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161361981|gb|ABX65749.1| hypothetical protein SPAB_00308 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194407906|gb|ACF68125.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194459187|gb|EDX48026.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195632930|gb|EDX51384.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197092926|emb|CAR58355.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197242549|gb|EDY25169.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197937032|gb|ACH74365.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199604027|gb|EDZ02572.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205271360|emb|CAR36153.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205331403|gb|EDZ18167.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205335202|gb|EDZ21966.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205336220|gb|EDZ22984.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205346928|gb|EDZ33559.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206707563|emb|CAR31837.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|267991932|gb|ACY86817.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301156869|emb|CBW16345.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911213|dbj|BAJ35187.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225175|gb|EFX50235.1| Prolyl-tRNA synthetase ; Bacterial type [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323128562|gb|ADX15992.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326621946|gb|EGE28291.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326626606|gb|EGE32949.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332987194|gb|AEF06177.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 572 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S D+ E Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSD-VSDYAANIE 234 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 383 VVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 443 CYGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + ++ Sbjct: 503 QGIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDI 562 Query: 435 INYASHRFS 443 ++Y Sbjct: 563 VDYLVKAIK 571 >gi|294084802|ref|YP_003551562.1| threonyl-tRNA synthetase [Candidatus Puniceispirillum marinum IMCC1322] gi|292664377|gb|ADE39478.1| Threonyl-tRNA synthetase [Candidatus Puniceispirillum marinum IMCC1322] Length = 641 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 75/440 (17%), Positives = 146/440 (33%), Gaps = 40/440 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L +L+E RD +L + + + + G W G + + +R + Sbjct: 230 NAYLHMLEEAEKRDHRKLGKQLDMF--HLQEEAAGSVFWHQKGWFIYREIESYVRRRLEQ 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L LW ESG +D + + M +++ + P + IFR IK Sbjct: 288 AGYGEVKTPQLVDRTLWEESGHWDKFRENMFTAQSEDERTLALKPMNCPCHVQIFRQGIK 347 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F DA+ F + ++ S Sbjct: 348 SYRDLPLRMAEFGSCHRNEPSGALHGIMRVRAFTQDDAHIFCTEDQITEESVQF-CALLQ 406 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 I+ G + ++ P D + Sbjct: 407 SIYADFGFTDVRVKFSDRPEVR-----------------AGDDATWDKAESALTDACSAA 449 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 ++ A Y + L D++ + + ++ F + + A + Sbjct: 450 KLETTLNPGEGAFYGPKLEF---VLRDAIGRDWQCGTLQVD----FVLPER----LDAEY 498 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DG H + +G+M ++ + G+ W V S+ Sbjct: 499 VGEDGNRHRPVMLHRAILGSMERWIGILIEQYSGRMPNWLAPVQIVVASIT------DSA 552 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D E++ +G V D E+I + ++ P + VG + V ++ Sbjct: 553 NDYAEQVARTAEAMGLRVERDFRNEKISYKVREHSVMKVPFILAVGGREAEAGTVALRRL 612 Query: 422 LTGIREDMSLEEVINYASHR 441 + + + ++E + Sbjct: 613 GSNDQTVLDMKEALAMLRDE 632 >gi|167626332|ref|YP_001676832.1| threonyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189083609|sp|B0TY89|SYT_FRAP2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|167596333|gb|ABZ86331.1| threonyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 635 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 74/443 (16%), Positives = 142/443 (32%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD L L + S GI W G + V +R + G Sbjct: 231 YLHMLEEAEKRDHRKIGKALDLF--HFQEDSPGIAFWHDNGVRIWREVEDYMRASNKKYG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG Y + M ++ P + ++ + + SY Sbjct: 289 CGEIRTPLIADFSLWEKSGHASKYAENMF-ATKSENRDFAIRPMNCPTCVQVYNTKLHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F D + F + + + + Sbjct: 348 RDLPIRMAEFGIVHRNEPSGSLHGLMRVRSFTQDDGHIFCAPEQVEEEVILMVKQCFEV- 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++ P + E D D Sbjct: 407 YKDFGFNDFTVKIALRPENRIGNDE-----------------TWDKSEQMLKNALDANNV 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ A Y + H L D++ + + ++ G AT+ Sbjct: 450 AYELLPGEGAFYGPKIEFH---LKDAIGRSWQCGTIQLDFSMPDRLG--------ATYID 498 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G V + +G++ ++ + G +W + + + Sbjct: 499 KNGNKQVPVMLHRAIVGSLERFIGMLIEHYAGNMPLW------LTPVQVAVMGISNHQDE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C+K++ L K G D E+IG + LL P VI+G V ++ Sbjct: 553 YCQKVFETLEKNGIRAKLDLRNEKIGFKIREHTLLRVPYLVILGKSEQEQEIVTVRKHNG 612 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 MS+ + + + + + Sbjct: 613 EDLGQMSIGDFCAFLNEQIEAKK 635 >gi|256763421|ref|ZP_05504001.1| threonyl-tRNA synthetase [Enterococcus faecalis T3] gi|256958077|ref|ZP_05562248.1| threonyl-tRNA synthetase [Enterococcus faecalis DS5] gi|257079964|ref|ZP_05574325.1| threonyl-tRNA synthetase [Enterococcus faecalis JH1] gi|256684672|gb|EEU24367.1| threonyl-tRNA synthetase [Enterococcus faecalis T3] gi|256948573|gb|EEU65205.1| threonyl-tRNA synthetase [Enterococcus faecalis DS5] gi|256987994|gb|EEU75296.1| threonyl-tRNA synthetase [Enterococcus faecalis JH1] Length = 645 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 161/443 (36%), Gaps = 34/443 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L M+ + G+ WLP G + I +++ Sbjct: 231 FIKMREEAKERDHRKLGKELDLF--MVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISL 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D M + P + ++++ I Sbjct: 289 GYQHVYTPIMADVELYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIH 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + + + Sbjct: 349 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA 408 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ + R D T + D M + D++ Sbjct: 409 VYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKAAMDEL 454 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ F ++ T+ Sbjct: 455 ELDYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTY 503 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++ + + + G + + + + +P +AP + ++I + + Sbjct: 504 VGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV--EAHS 560 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +I RL G V DD E++G + + P Q++VG K + D+ V ++ Sbjct: 561 EYAYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKVPYQLVVGDKEMEDATVNVRRYG 620 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L I+ + N Sbjct: 621 SKETSVEDLSIFIDSMAAEVHNY 643 >gi|300938604|ref|ZP_07153336.1| prolyl-tRNA synthetase [Escherichia coli MS 21-1] gi|331645338|ref|ZP_08346449.1| proline--tRNA ligase [Escherichia coli M605] gi|281177420|dbj|BAI53750.1| prolyl-tRNA synthetase [Escherichia coli SE15] gi|300456450|gb|EFK19943.1| prolyl-tRNA synthetase [Escherichia coli MS 21-1] gi|330910045|gb|EGH38555.1| prolyl-tRNA synthetase [Escherichia coli AA86] gi|331046095|gb|EGI18214.1| proline--tRNA ligase [Escherichia coli M605] Length = 572 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 164/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDT-SDYAANIE 234 Score = 174 bits (440), Expect = 4e-41, Method: Composition-based stats. Identities = 66/187 (35%), Positives = 113/187 (60%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 385 ADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 445 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++++ Sbjct: 505 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVD 564 Query: 437 YASHRFS 443 Y + Sbjct: 565 YLVKQIK 571 >gi|255974800|ref|ZP_05425386.1| threonyl-tRNA synthetase [Enterococcus faecalis T2] gi|256616698|ref|ZP_05473544.1| threonyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|257081588|ref|ZP_05575949.1| threonyl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|257084237|ref|ZP_05578598.1| threonyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|257417026|ref|ZP_05594020.1| threonyl-tRNA synthetase [Enterococcus faecalis AR01/DG] gi|255967672|gb|EET98294.1| threonyl-tRNA synthetase [Enterococcus faecalis T2] gi|256596225|gb|EEU15401.1| threonyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|256989618|gb|EEU76920.1| threonyl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|256992267|gb|EEU79569.1| threonyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|257158854|gb|EEU88814.1| threonyl-tRNA synthetase [Enterococcus faecalis ARO1/DG] gi|295113730|emb|CBL32367.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Enterococcus sp. 7L76] Length = 645 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 161/443 (36%), Gaps = 34/443 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L M+ + G+ WLP G + I +++ Sbjct: 231 FIKMREEAKERDHRKLGKELDLF--MVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISL 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D M + P + ++++ I Sbjct: 289 GYQHVYTPIMADVELYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIH 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + + + Sbjct: 349 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA 408 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ + R D T + D M + D++ Sbjct: 409 VYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKAAMDEL 454 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ F ++ T+ Sbjct: 455 ELDYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTY 503 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++ + + + G + + + + +P +AP + ++I + + Sbjct: 504 VGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV--EAHS 560 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +I RL G V DD E++G + + P Q++VG K + D+ V ++ Sbjct: 561 EYAYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKVPYQLVVGDKEMEDATVNVRRYG 620 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L I+ + N Sbjct: 621 SKETSVEDLSIFIDSMAAEVHNY 643 >gi|218698853|ref|YP_002406482.1| prolyl-tRNA synthetase [Escherichia coli IAI39] gi|226701079|sp|B7NKX8|SYP_ECO7I RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|218368839|emb|CAR16587.1| prolyl-tRNA synthetase [Escherichia coli IAI39] Length = 572 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 164/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDT-SDYAANIE 234 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 66/187 (35%), Positives = 112/187 (59%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 385 ADIRNVVAGDPSPDGQGTLQIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 445 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++++ Sbjct: 505 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVD 564 Query: 437 YASHRFS 443 Y + Sbjct: 565 YLVKQIK 571 >gi|157371993|ref|YP_001479982.1| prolyl-tRNA synthetase [Serratia proteamaculans 568] gi|166980154|sp|A8GIB4|SYP_SERP5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157323757|gb|ABV42854.1| prolyl-tRNA synthetase [Serratia proteamaculans 568] Length = 572 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N AIE+ +P +Q ADLW ESGR++ YG E+LR DR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNANAIEVCMPVVQPADLWQESGRWEQYGPELLRFVDRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y M+ + Sbjct: 121 EISSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQATYEAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL P+ A++G IGG SHEF VLAD+GE + DF E Sbjct: 181 YSKIFSRMGLDFRPVHADTGSIGGSASHEFQVLADSGEDDIVF-STGSDFAANIE 234 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 74/192 (38%), Positives = 113/192 (58%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ K + RGIEVGHIF GTKYS M AT +G DG++ + Sbjct: 380 PLPQVADIRNVVEGDASPDGKGTLLIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRNQVL 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWPD++APF+++++ + H + E++Y Sbjct: 440 TMGCYGIGVTRVVAAAIEQNHDERGIIWPDAIAPFQVAILPMNMHKSFRVQALAEELYNT 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P +++G + + ++E K+R G ++ + Sbjct: 500 LRSHGIDVILDDRKERPGVMFADMELIGVPHSIVIGDRNLDSEEIEYKNRRVGEKQMIKT 559 Query: 432 EEVINYASHRFS 443 EVI++ + Sbjct: 560 GEVIDFLLGQIK 571 >gi|238787089|ref|ZP_04630889.1| Threonyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641] gi|238724877|gb|EEQ16517.1| Threonyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641] Length = 642 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 71/442 (16%), Positives = 141/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y + M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYAEHMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHVFCTEEQVRDE-VNSCIKMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S + A+ + Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDDLWTRAED-----------------DLAAALTENGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ F + S A++ G Sbjct: 451 PFDYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGRLS----ASYIG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+M ++ + G W V +++ D Sbjct: 500 ENNDRQVPVMIHRAILGSMERFIGILTEEYAGFFPTWLAPVQVVVMNIT------DSQSD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L G D E+IG + L P ++ G K V K+ ++ R Sbjct: 554 YVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + V++ + Sbjct: 614 KDLGSLDVNVVVDQLLTEIRSR 635 >gi|254468875|ref|ZP_05082281.1| threonyl-tRNA synthetase [beta proteobacterium KB13] gi|207087685|gb|EDZ64968.1| threonyl-tRNA synthetase [beta proteobacterium KB13] Length = 652 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 145/442 (32%), Gaps = 41/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E RD L L I ++ G+ W G + +R++ G Sbjct: 248 YLHRLEEAEKRDHRKLGKHLDLF--HIQDNAPGMVFWHAKGWSLWQEIENYMRKKFVDYG 305 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ PT+ LW +SG +++Y + M + + P + IF + SY Sbjct: 306 YQEIKTPTVLDKTLWEKSGHWENYHENMF-ITHSEHRDYAVKPMNCPGHVQIFNHSLHSY 364 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+E G+MR R F DA+ F + N + Sbjct: 365 RELPLRLAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQILDEVINFN-KMLMET 423 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ + P S E D + Sbjct: 424 YKDFGFNDIEVKLSTRPEKRVGSDE-----------------VWDQSEKALEEALKATGL 466 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I A Y + L DSL + ++ F + ++A + Sbjct: 467 DYEIQPGEGAFYGPKIEY---VLRDSLNRLWQCGTIQLD----FNLPVR----LNAEYVD 515 Query: 305 AD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + K H V + +G+M ++ + GK W V +++ Sbjct: 516 ENSNKKHPVMLHRAIVGSMERFIGILIEHYAGKFPTWLAPVQAVVMNI------SDSQAK 569 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + L K D E+I + + P +++G + + + +V ++ + Sbjct: 570 YVGDVVDFLKKNDIRCESDLRNEKITYKIREHSISRIPFMLVIGDREMQNKQVAVRTQQG 629 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M+LEE + + + + Sbjct: 630 EDLGVMTLEEFVETMNTQITAK 651 >gi|261408878|ref|YP_003245119.1| threonyl-tRNA synthetase [Paenibacillus sp. Y412MC10] gi|261285341|gb|ACX67312.1| threonyl-tRNA synthetase [Paenibacillus sp. Y412MC10] Length = 645 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 84/442 (19%), Positives = 168/442 (38%), Gaps = 37/442 (8%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L + T +G+ WLP G K + I + + R G Sbjct: 235 LRLLEEAKKRDHRKLGKELQMFT-FSQLVGQGLPIWLPNGAKLRRTLERYIVDMEERLGY 293 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L + +L+ SG ++ Y ++M + +++ ++ P + +++S + SYR Sbjct: 294 QHVYTPVLGNVELYKTSGHWEHYQEDMFPKMEMDNEELVLRPMNCPHHMMVYKSDMHSYR 353 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ ++ R E+ G+ R R + D++ F P+ K + ++ + ++ Sbjct: 354 DLPIRIAELGMQHRYEMSGALTGLHRVRAMTLNDSHIFCR-PDQIKEEFARVIQLIMTVY 412 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS-KDFMDFPIPSENTDFDDIIS 244 G+ R D +T+ + + + + + Sbjct: 413 KDFGIHDYRFRLS--------------YRDPQDTEKYFQNDEMWEMSQRMLREVVESLDM 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ +L + + +S ++ F ++ + G Sbjct: 459 PFYEAEGEAAFYGPKLDV---QIRTALGKEETLSTVQLD----FLLPERF----ELEYVG 507 Query: 305 ADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + GI G M A + + G +W V I + N D Sbjct: 508 DDGQKHRPVVIHRGILGTMERFTAFLLENFAGALPLWLSPVQVKVIPVSN------AFED 561 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L G V D E++G + A L P IVG + V ++ R Sbjct: 562 YAKEVAEKLQFAGISVEPDLRNEKLGYKIREAQLEKIPYMFIVGENEKNAGAVSVRKRGE 621 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G L+E+I + + Sbjct: 622 GDIGAQPLDEIILKLREEINTH 643 >gi|238791701|ref|ZP_04635338.1| Threonyl-tRNA synthetase [Yersinia intermedia ATCC 29909] gi|238728805|gb|EEQ20322.1| Threonyl-tRNA synthetase [Yersinia intermedia ATCC 29909] Length = 642 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 74/442 (16%), Positives = 144/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y + M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYAEHMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDE-VNSCIKMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S + A E + + D P Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDDLWTRA---EDDLAAALTENDIPFE----------- 453 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ F + S A++ G Sbjct: 454 ---YQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGRLS----ASYIG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+M ++ + G W V +++ D Sbjct: 500 ENNDRQVPVMIHRAILGSMERFIGILTEEYAGFFPTWLAPVQVVVMNIT------DSQSD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L G D E+IG + L P ++ G K V K+ ++ R Sbjct: 554 YVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + V++ + Sbjct: 614 KDLGSLDVNVVVDQLLTEIRSR 635 >gi|91793061|ref|YP_562712.1| threonyl-tRNA synthetase [Shewanella denitrificans OS217] gi|123060978|sp|Q12NI7|SYT_SHEDO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|91715063|gb|ABE54989.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Shewanella denitrificans OS217] Length = 642 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 73/441 (16%), Positives = 140/441 (31%), Gaps = 40/441 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + + + G+ W G + IR++ + Sbjct: 233 LTRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWSLFLELEKFIRQKLGQYTY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M + ++ P + IF +KSYR Sbjct: 291 QEVKGPLMMDRALWERSGHWDKYSDAMFT-TNSENREYAIKPMNCPGHVQIFNQGLKSYR 349 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F + K + + Sbjct: 350 DLPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTDDQVQKE-VSDCIQMVYDTY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G ++I ++ + P D D + Sbjct: 409 ATFGFENIVVKLSTRPEKR-----------------IGDDDMWDRAEEALKQALIANEIE 451 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I+ A Y + L D L + ++ G AT+ Sbjct: 452 FEILPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDYALPSRLG--------ATYVAE 500 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D + +G++ ++ + GK W + +++ D Sbjct: 501 DNTRQTPVMIHRAILGSLERFLGILIEEYAGKFPTWLAPMQVVVMNIT------DKQADY 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + + G +D E+IG + L P ++VG + + + +V ++ R Sbjct: 555 VQDVVKIFKEQGIRASFDLRNEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRTRDGI 614 Query: 425 IREDMSLEEVINYASHRFSNN 445 MS+E+ S+ Sbjct: 615 DLGKMSIEDFAKKIHKDISSR 635 >gi|300113463|ref|YP_003760038.1| prolyl-tRNA synthetase [Nitrosococcus watsonii C-113] gi|299539400|gb|ADJ27717.1| prolyl-tRNA synthetase [Nitrosococcus watsonii C-113] Length = 574 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 119/231 (51%), Positives = 157/231 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAEI SH+LMLR I + + G+Y+WLPLG + L V IIREE Sbjct: 1 MRTSQYLLTTTRETPADAEIISHQLMLRGSFIRRLAAGLYTWLPLGLRVLRKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+ +P +Q A+LW E+GR++ YG E+LR DR+ + +GPTHEEV+TD+ R Sbjct: 61 MDKAGAQEVLMPAVQPAELWRETGRWEQYGSELLRFTDRHQRFFCFGPTHEEVITDLIRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQLKFRDE+RPRFGVMRSREFLMKDAYSF +Y++M+ + Sbjct: 121 EIQSYKQLPANFYQIQLKFRDEIRPRFGVMRSREFLMKDAYSFHTDQTSLGQTYHQMYET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 Y IF R+GL ++A++G IGG SHEF VLA +GE + S Sbjct: 181 YSCIFDRIGLTFRAVQADTGMIGGKTSHEFHVLATSGEDAIAFSDKSAYAA 231 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 106/196 (54%), Gaps = 3/196 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P T+D+ N D P+ + ARGIEVGHIF G KYS M+AT G+ + Sbjct: 377 PEPTTADIRNVVDGDPSPDGEGTLSIARGIEVGHIFQLGKKYSQAMNATVLDEAGRAINL 436 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG RVVAA IE +HD GIIWP +APF+++L+ I AH V ++ +++Y Sbjct: 437 AMGCYGIGVSRVVAAAIEQNHDEHGIIWPAPIAPFQLALVPINAHKSVRVKEMSDQLYTE 496 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G +V DD + G FA DL+G P ++++ + + +S VE K R G + L Sbjct: 497 LQAAGFEVLLDDRQLRPGVIFADMDLIGIPHRLVISERGLENSTVEYKRRQDGKTCVIQL 556 Query: 432 EEVINYASHRFSNNRP 447 + I+ + P Sbjct: 557 DNFISGLKDQLKTPIP 572 >gi|313672947|ref|YP_004051058.1| prolyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672] gi|312939703|gb|ADR18895.1| prolyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672] Length = 572 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 133/282 (47%), Positives = 180/282 (63%), Gaps = 1/282 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKYF+P L+ENP DAE+ SHKLM+R GMI + + GIY++LP+G + + V IIR+ Sbjct: 1 MRLSKYFVPTLRENPSDAEVVSHKLMVRAGMIRKVAAGIYNYLPMGLRVIRKVENIIRKY 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P + A+LW ESGR++ YGKE+LR DR+D+ GPTHEEV+TDI R+ Sbjct: 61 MNEAGAIEILMPAVVPAELWKESGRWNVYGKELLRFKDRHDRDFCMGPTHEEVVTDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY++LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ EG++ SY M + Sbjct: 121 EIKSYKDLPVNLYQIQTKFRDEVRPRFGLMRGREFIMKDAYSFDVDDEGAEKSYGLMRDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF GLK + A+SG IGG+ SHEF+V A+TGE V D+ E Sbjct: 181 YCKIFESCGLKYKVVEADSGAIGGNFSHEFMVTAETGEDFVISCDSC-DYAANVEKAPVI 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 D + VE+ + E++ L + + + Sbjct: 240 DNFEEDDEVEKPIEKIETKNQKTVEEVAKFLNVETKKVVKTM 281 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 79/196 (40%), Positives = 111/196 (56%), Gaps = 5/196 (2%) Query: 256 YAATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 A SD N K D P+ V +GIEVGHIF GTKYS M+AT+ DGK Y+ Sbjct: 376 VTAFSDFINAKPGDKCPKCGGTYVITKGIEVGHIFKLGTKYSKSMNATYLDKDGKQQYIV 435 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R AA IE +HD KGIIWP +APF++ +I I D+ + E +Y +L Sbjct: 436 MGCYGIGVGRTAAAAIEQNHDEKGIIWPIQIAPFEVVIIPINTDDEDVVNLSETLYKKLL 495 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 K +V DD E+ G +F ADL+G+P++V +G K + + +VEI R TG + + ++ Sbjct: 496 KKNVEVIIDDRNERAGVKFNDADLVGYPIRVNIGKKTLENGEVEIVIRKTGDKINCKKDD 555 Query: 434 VIN---YASHRFSNNR 446 ++ NN+ Sbjct: 556 ALSEILRIREELYNNK 571 >gi|256963904|ref|ZP_05568075.1| threonyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|256954400|gb|EEU71032.1| threonyl-tRNA synthetase [Enterococcus faecalis HIP11704] Length = 645 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 161/443 (36%), Gaps = 34/443 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L M+ + G+ WLP G + I +++ Sbjct: 231 FIKMREEAKERDHRKLGKELDLF--MVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISL 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D M + P + ++++ I Sbjct: 289 GYQHVYTPIMADVELYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIH 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + + + Sbjct: 349 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA 408 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ + R D T + D M + D++ Sbjct: 409 VYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKAAMDEL 454 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ F ++ T+ Sbjct: 455 ELDYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTY 503 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++ + + + G + + + + +P +AP + ++I + + Sbjct: 504 VGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV--EAHS 560 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +I RL G V DD E++G + + P Q++VG K + D+ V ++ Sbjct: 561 EYAYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKVPYQLVVGDKEMEDATVNVRRYG 620 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L I+ + N Sbjct: 621 SKETSVEDLSIFIDSMAAEVHNY 643 >gi|323700409|ref|ZP_08112321.1| prolyl-tRNA synthetase [Desulfovibrio sp. ND132] gi|323460341|gb|EGB16206.1| prolyl-tRNA synthetase [Desulfovibrio desulfuricans ND132] Length = 580 Score = 250 bits (638), Expect = 4e-64, Method: Composition-based stats. Identities = 129/244 (52%), Positives = 172/244 (70%), Gaps = 1/244 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y++P L+E+P DAE+ SHKL++R GMI + + GIY++LPLG +A++ V I+REE Sbjct: 1 MRLSRYYIPTLKEDPADAEVVSHKLLMRAGMIRKLTSGIYNYLPLGLRAINKVAQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +PT+Q ADLW E+GR+D YGKE+LR DRND+ GPTHEEV+TD+ R Sbjct: 61 MNRAGALEVLLPTVQPADLWRETGRWDYYGKELLRFKDRNDRDYCLGPTHEEVITDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQ+Q KFRDE+RPRFG+MR REF+MKD YSFD G++ SY MF + Sbjct: 121 EIKSYKQLPVNLYQVQTKFRDEIRPRFGLMRGREFIMKDGYSFDKDEAGAEQSYWDMFNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y F R+GL+ P++A+SG IGG SHEF+VLA+TGE + DF E + Sbjct: 181 YKAAFTRIGLRFKPVQADSGAIGGSFSHEFMVLAETGEDTIASCLSC-DFAANLEKAKVN 239 Query: 241 DIIS 244 Sbjct: 240 APKG 243 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 74/192 (38%), Positives = 111/192 (57%), Gaps = 2/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 +D+ + D+ PE +GIEVGH+F G KYS M ATF +GK Sbjct: 375 GRDCDIVQYADLRVIEPTDACPECGGAIEFTKGIEVGHVFKLGLKYSKKMEATFLDENGK 434 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 Y+ MG YGIG R+VA+ IE + D G +P S+APF++ LI++ DQ D E++ Sbjct: 435 SQYMIMGCYGIGVSRIVASAIEQNFDENGCCFPPSIAPFEVCLISLGGKDQDVADKAEEL 494 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 YA L K+G DV +DD GE+ G +FA ADL+G+P+Q+++G K + + +E K R TG + + Sbjct: 495 YAELMKLGVDVAFDDRGERPGVKFAEADLIGYPMQLVLGGKGLKNGIIEAKDRKTGEKVE 554 Query: 429 MSLEEVINYASH 440 + L+ + Sbjct: 555 LPLDTFAASFAD 566 >gi|254483545|ref|ZP_05096771.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2148] gi|214036202|gb|EEB76883.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2148] Length = 580 Score = 250 bits (638), Expect = 4e-64, Method: Composition-based stats. Identities = 125/290 (43%), Positives = 177/290 (61%), Gaps = 6/290 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S + + +E P DAE+ SH+LMLR G+I + + G+YSWLPLG + L V ++REE Sbjct: 11 MRTSNFLIATQKETPADAEVISHQLMLRAGLIRKLAAGLYSWLPLGLRVLRKVENVVREE 70 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E+S+P +Q A+LW ESGR++ YG E+LR+ DR+ + GPTHEEV+TD+ R+ Sbjct: 71 MNAAGAQEVSMPVVQPAELWQESGRWEQYGSELLRIQDRHQRDFCLGPTHEEVITDLIRN 130 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K RDE+RPRFG+MRSREFLMKDAYSF + + +Y M + Sbjct: 131 EVKSYKQLPLNMYQIQTKVRDEIRPRFGIMRSREFLMKDAYSFHASQASLEDTYQIMHGA 190 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y ++F RLGL P+ A++G IGG SHEF VLA++GE + S D+ E + Sbjct: 191 YTKVFTRLGLDFRPVIADTGSIGGSASHEFHVLANSGEDDIAFSDS-SDYAANIEMAEAV 249 Query: 240 ----DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 + + E T + D+ N ++ K + +G + G Sbjct: 250 SPAIERPGPSEEMTEVATPGVKSIEDLANFLCIEATQSVKTLIVKGEDEG 299 Score = 186 bits (471), Expect = 9e-45, Method: Composition-based stats. Identities = 69/195 (35%), Positives = 113/195 (57%), Gaps = 3/195 (1%) Query: 253 TAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 P + +D+ D+ P+ K RGIEVGHIF GTKYS M A +GK+ Sbjct: 386 DCPLSQVADLREVVEGDASPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKAEVLNENGKNV 445 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIY 369 + MG YGIG RVVAA IE +HD KGIIWP+++APF+++++ + + + E +Y Sbjct: 446 TMTMGCYGIGVSRVVAAAIEQNHDDKGIIWPEAMAPFQLAIVPLNMQKSEAVANCAEALY 505 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 A L VG DV DD E+ G +FA +L+G P ++++G + +++ ++E K R + + Sbjct: 506 ANLQSVGVDVLLDDRNERPGVKFADMELIGIPHRIVIGDRALAEGQIEYKGRRDEDSQLI 565 Query: 430 SLEEVINYASHRFSN 444 E+++++ + + Sbjct: 566 PQEDIVSFLQEQLRS 580 >gi|33152811|ref|NP_874164.1| threonyl-tRNA synthetase [Haemophilus ducreyi 35000HP] gi|71153574|sp|Q7VKR9|SYT_HAEDU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|33149036|gb|AAP96553.1| threonyl-tRNA synthetase [Haemophilus ducreyi 35000HP] Length = 643 Score = 250 bits (638), Expect = 4e-64, Method: Composition-based stats. Identities = 71/445 (15%), Positives = 142/445 (31%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LTEYLTRLEEAAKRDHRRIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + LW +G + +Y +++ ++ P + IF + Sbjct: 287 EYDYQEVKGPFMMDRVLWERTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T E + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEEQIESEVTACIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G +I ++ + P + D D + Sbjct: 405 YDIYSTFGFTNIFVKLSTRPDNR-----------------IGADDMWDRAEAGLSAALSA 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I A Y + L D L + ++ A+ Sbjct: 448 NGLEYQIQHGEGAFYGPKIEF---ALRDCLGREWQCGTVQLDFALPSRLD--------AS 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D H + +G++ +I + G +W + +++ Sbjct: 497 YVTEDNSRHTPVMIHRAILGSIERFIGIITEEYAGFFPVWLAPIQAVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +++ +LS G V D E++G + L P ++ G K +++ KV ++ Sbjct: 551 QADYVQQVVKQLSDAGLRVKADLRNEKVGFKVREHTLRRVPYMLVCGDKEITEGKVSVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R ++E + + Sbjct: 611 RKGEDLGTFNIEAFVEMLKAQVKTR 635 >gi|322514773|ref|ZP_08067797.1| threonine--tRNA ligase [Actinobacillus ureae ATCC 25976] gi|322119269|gb|EFX91397.1| threonine--tRNA ligase [Actinobacillus ureae ATCC 25976] Length = 653 Score = 250 bits (638), Expect = 4e-64, Method: Composition-based stats. Identities = 71/445 (15%), Positives = 138/445 (31%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 239 LAEYLTRLEEAAKRDHRRIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLK 296 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + LW +G + +Y +++ ++ P + IF + Sbjct: 297 EYDYQEVKGPFMMDRVLWERTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGL 355 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 356 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIKMV 414 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G +I ++ + P D Sbjct: 415 YDIYSTFGFSNIQVKLSTRPENR-----------------IGDDAMWDRAEDGLAKALTA 457 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L D L + ++ A+ Sbjct: 458 NGLSYEIQEGEGAFYGPKIEF---ALRDCLDREWQCGTIQLDFALPGRLD--------AS 506 Query: 302 FKGA-DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +G+ V + +G++ +I + G W +++ Sbjct: 507 YVAEDNGRRTPVMIHRAILGSIERFIGIITEEYAGFFPTWLAPTQAVVMNIT------DS 560 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ LS G D E++G + L P ++ G K + KV ++ Sbjct: 561 QADYVQKVTKALSDAGIRAKSDLRNEKVGFKVREHTLRRVPYMLVCGDKEIEAGKVSVRT 620 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R ++EE + ++ Sbjct: 621 RKGADLGTFTIEEFVEILKNQVKAR 645 >gi|229846781|ref|ZP_04466888.1| threonyl-tRNA synthetase [Haemophilus influenzae 7P49H1] gi|229810270|gb|EEP45989.1| threonyl-tRNA synthetase [Haemophilus influenzae 7P49H1] Length = 643 Score = 250 bits (638), Expect = 4e-64, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 144/445 (32%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LAEYLTRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + LW ++G + +Y +++ ++ P + IF + Sbjct: 287 QYDYQEVKGPFMMDRVLWEKTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G +I ++ + P S E D Sbjct: 405 YDIYSTFGFTNIAVKLSTRPENRIGSDE-----------------MWDRAEAGLAAALAH 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L D L + ++ AT Sbjct: 448 NGLEYEIQEGEGAFYGPKIEF---ALRDCLGREWQCGTVQLDFALPGRLD--------AT 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ +I + G W +++ Sbjct: 497 YVAEDNSRKTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPTQAVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ +LS VG V D E++G + L P ++ G K +++ K+ ++ Sbjct: 551 QADYVQKVAKQLSDVGLRVKTDLRNEKVGFKIREHTLRRVPYMLVCGDKEIAEGKIAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R ++EE ++ + Sbjct: 611 RKGADLGTFTVEEFAEILKNQVRSR 635 >gi|29377326|ref|NP_816480.1| threonyl-tRNA synthetase [Enterococcus faecalis V583] gi|255971805|ref|ZP_05422391.1| threonyl-tRNA synthetase [Enterococcus faecalis T1] gi|256854147|ref|ZP_05559512.1| threonyl-tRNA synthetase [Enterococcus faecalis T8] gi|73919789|sp|Q830D0|SYT_ENTFA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|29344793|gb|AAO82550.1| threonyl-tRNA synthetase [Enterococcus faecalis V583] gi|255962823|gb|EET95299.1| threonyl-tRNA synthetase [Enterococcus faecalis T1] gi|256711090|gb|EEU26133.1| threonyl-tRNA synthetase [Enterococcus faecalis T8] gi|323481721|gb|ADX81160.1| threonyl-tRNA synthetase [Enterococcus faecalis 62] Length = 645 Score = 250 bits (638), Expect = 4e-64, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 161/443 (36%), Gaps = 34/443 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L M+ + G+ WLP G + I +++ Sbjct: 231 FIKMREEAKERDHRKLGKELDLF--MVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISL 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D M + P + ++++ I Sbjct: 289 GYQHVYTPIMADVELYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIH 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + + + Sbjct: 349 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA 408 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ + R D T + D M + D++ Sbjct: 409 VYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKAAMDEL 454 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ F ++ T+ Sbjct: 455 ELDYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTY 503 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++ + + + G + + + + +P +AP + ++I + + Sbjct: 504 VGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV--EAHS 560 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +I RL G V DD E++G + + P Q++VG K + D+ V ++ Sbjct: 561 EYAYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKVPYQLVVGDKEMEDATVNVRRYG 620 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L I+ + N Sbjct: 621 SKETSVEDLSIFIDSMAAEVHNY 643 >gi|257421590|ref|ZP_05598580.1| threonyl-tRNA synthetase [Enterococcus faecalis X98] gi|257163414|gb|EEU93374.1| threonyl-tRNA synthetase [Enterococcus faecalis X98] Length = 645 Score = 250 bits (638), Expect = 4e-64, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 161/443 (36%), Gaps = 34/443 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L M+ + G+ WLP G + I +++ Sbjct: 231 FIKMREEAKERDHRKLGKELDLF--MVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISL 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D M + P + ++++ I Sbjct: 289 GYQHVYTPIMADVELYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIH 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + + + Sbjct: 349 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA 408 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ + R D T + D M + D++ Sbjct: 409 VYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKAAMDEL 454 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ F ++ T+ Sbjct: 455 ELDYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTY 503 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++ + + + G + + + + +P +AP + ++I + + Sbjct: 504 VGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV--EAHS 560 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +I RL G V DD E++G + + P Q++VG K + D+ V ++ Sbjct: 561 EYAYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKVPYQLVVGDKEMEDATVNVRRYG 620 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L I+ + N Sbjct: 621 SKETSVEDLSIFIDSMAAEVHNY 643 >gi|52425108|ref|YP_088245.1| threonyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E] gi|73919804|sp|Q65TQ0|SYT_MANSM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|52307160|gb|AAU37660.1| ThrS protein [Mannheimia succiniciproducens MBEL55E] Length = 643 Score = 250 bits (638), Expect = 4e-64, Method: Composition-based stats. Identities = 73/445 (16%), Positives = 142/445 (31%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LNEYLTRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + LW ++G + +Y +++ ++ P + IF + Sbjct: 287 EYDYQEVKGPFMMDRVLWEKTGHWQNY-GDLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIRMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G +I ++ + P D Sbjct: 405 YDIYSTFGFTNIAVKLSTRPENR-----------------IGDDAMWDRAEQGLANALAH 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L D L + ++ +A+ Sbjct: 448 NGLQYEIQEGEGAFYGPKIEF---ALRDCLDREWQCGTVQLDFALPGRL--------NAS 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ +I + G W V +++ Sbjct: 497 YVAEDNDRRTPVMIHRAILGSIERFIGIITEEYAGFFPSWLAPVQAVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + +K+ LS G V D E++G + L P ++ G K +S+ KV ++ Sbjct: 551 QAEYVQKVTKTLSDAGLRVKSDLRNEKVGFKVREHTLRRVPYMLVCGDKEISEGKVSVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R S+EE + ++ + Sbjct: 611 RRGADLGTYSVEEFVEILKNQVRSR 635 >gi|183221772|ref|YP_001839768.1| threonyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911846|ref|YP_001963401.1| threonyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776522|gb|ABZ94823.1| Threonine--tRNA ligase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780194|gb|ABZ98492.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase; ThrRS) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 638 Score = 250 bits (638), Expect = 4e-64, Method: Composition-based stats. Identities = 78/440 (17%), Positives = 150/440 (34%), Gaps = 38/440 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L + + G W P G + + + IREE R Sbjct: 236 EYIFLIEEAKKRDHRKLGKELDLFS--FQDEAPGFPFWHPKGTVLWNTLASYIREECFRR 293 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + ++ LW +SG +D++ + M D ++ P + I++ H+ S Sbjct: 294 GYQEIKTPAILNSSLWKKSGHWDNFKENM-YFTDIDESEFAVKPMNCPGCCLIYKYHMHS 352 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP F ++ R E+ G+ R R F DA+ + + + Sbjct: 353 YRELPLRFMELGNVHRHEMSGVLHGLFRVRAFTQDDAHIYAPLDKVESE-VEDIIDFTFD 411 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ + G + P S E + + + Sbjct: 412 VYKKFGFTEFKTFIATRPEKSQGSDE-----------------DWNLATQALHDALKKKG 454 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E A Y + + DSL + I+ F ++ L +A+ Sbjct: 455 IEYGIKEGDGAFYGPKIEF---NIKDSLGRLWQCGTVQID----FSMPNRFELDFTAS-- 505 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 K V + G++ ++ +GK +W + I + + D Sbjct: 506 -DGKKHAPVMIHRAIYGSLERFIGILIEHFEGKFPLW------LNPTQIRVLTVAETHSD 558 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++Y L G V D E+IGS+ + + +I+G K + + Sbjct: 559 YAKEVYQDLVMQGFRVELDVRNEKIGSKIRDSIMKRSSYTLILGDKEKEAGSISYRRMGE 618 Query: 424 GIREDMSLEEVINYASHRFS 443 +S + ++ + Sbjct: 619 ETTATVSRDGFLSLLKGELN 638 >gi|189424928|ref|YP_001952105.1| threonyl-tRNA synthetase [Geobacter lovleyi SZ] gi|189421187|gb|ACD95585.1| threonyl-tRNA synthetase [Geobacter lovleyi SZ] Length = 646 Score = 250 bits (638), Expect = 4e-64, Method: Composition-based stats. Identities = 81/444 (18%), Positives = 149/444 (33%), Gaps = 39/444 (8%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L L+E R D +L L + + G W P G + R+E + Sbjct: 240 EAYLHRLEEAKRRDHRKLGRELDLFS-FNDEVGAGFAIWHPKGAMLRTLLEDFERKEHLK 298 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 + P + +LW SG YD+Y + M + ++++ P + I++S ++ Sbjct: 299 RDYDIVVGPQILKTELWQRSGHYDNYRENM-YFTEVDEQSFGVKPMNCLSHMMIYKSQLR 357 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP ++++ R E G++R R F DA+ TPE + Sbjct: 358 SYRDLPQRYFELGTVHRHERAGVLHGLLRVRCFTQDDAHILC-TPEQLDAEIKGVLKFVS 416 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + G + + P S E + + D Sbjct: 417 DVMGIFGFEYEM-ELSTRPEKSIGSDE-----------------DWERATGALLGALKDT 458 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I E A Y D+ KL D L + + + F ++ L A+ Sbjct: 459 GRDFEINEGDGAFYGPKIDI---KLRDCLDRRWQCATIQCD----FTLPERFDLTYVAS- 510 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 K V + +G++ V+ G +W V +++ Sbjct: 511 --DGEKKRPVMVHRVILGSIERFIGVLIEHFAGNFPLWLAPVQAVVLTVT------DNQI 562 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++Y +L G V D E++ + A L P +++G K V V + R Sbjct: 563 PYAQEVYKQLRSAGIRVQEDLRNEKLNFKIREAQLQKIPYMLVIGDKEVEQGTVTPRFRD 622 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 M + I + + Sbjct: 623 GKNLHAMKPDAFIAFVEAETKAYK 646 >gi|15901467|ref|NP_346071.1| threonyl-tRNA synthetase [Streptococcus pneumoniae TIGR4] gi|111657539|ref|ZP_01408280.1| hypothetical protein SpneT_02001261 [Streptococcus pneumoniae TIGR4] gi|149011514|ref|ZP_01832761.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75] gi|303253984|ref|ZP_07340104.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS455] gi|303258557|ref|ZP_07344537.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293] gi|303262647|ref|ZP_07348587.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292] gi|303263586|ref|ZP_07349508.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS397] gi|303266970|ref|ZP_07352845.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS457] gi|303269866|ref|ZP_07355610.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS458] gi|22654131|sp|Q97PI4|SYT_STRPN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|14973120|gb|AAK75711.1| threonyl-tRNA synthetase [Streptococcus pneumoniae TIGR4] gi|147764504|gb|EDK71435.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75] gi|301802334|emb|CBW35088.1| threonyl-tRNA synthetase [Streptococcus pneumoniae INV200] gi|302599072|gb|EFL66098.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS455] gi|302636203|gb|EFL66698.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292] gi|302640058|gb|EFL70513.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293] gi|302640601|gb|EFL71004.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS458] gi|302643487|gb|EFL73759.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS457] gi|302646624|gb|EFL76849.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS397] Length = 647 Score = 250 bits (638), Expect = 4e-64, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 156/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I ++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVNKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 287 VSGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYEDFNLTDYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QIKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG+DH M G+ + I + + + I ++ Sbjct: 503 YIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +S++ + +N Sbjct: 619 GQKETQTVSVDNFVQAILADIANK 642 >gi|322657154|gb|EFY53437.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322686289|gb|EFY82273.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] Length = 277 Score = 250 bits (638), Expect = 4e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S D+ E Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSD-VSDYAANIE 234 >gi|256960954|ref|ZP_05565125.1| threonyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|256951450|gb|EEU68082.1| threonyl-tRNA synthetase [Enterococcus faecalis Merz96] Length = 645 Score = 250 bits (638), Expect = 4e-64, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 161/443 (36%), Gaps = 34/443 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L M+ + G+ WLP G + I +++ Sbjct: 231 FIKMREEAKERDHRKLGKELDLF--MVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISL 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D M + P + ++++ I Sbjct: 289 GYQHVYTPIMADVELYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIH 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + + + Sbjct: 349 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA 408 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ + R D T + D M + D++ Sbjct: 409 VYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKAAMDEL 454 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ F ++ T+ Sbjct: 455 ELDYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTY 503 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++ + + + G + + + + +P +AP + ++I + + Sbjct: 504 VGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV--EAHS 560 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +I RL G V DD E++G + + P Q++VG K + D+ V ++ Sbjct: 561 EYAYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKVPYQLVVGDKEMEDATVNVRRYG 620 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L I+ + N Sbjct: 621 SKETSVEDLSIFIDSMAAEVHNY 643 >gi|229175285|ref|ZP_04302800.1| Threonyl-tRNA synthetase [Bacillus cereus MM3] gi|228608117|gb|EEK65424.1| Threonyl-tRNA synthetase [Bacillus cereus MM3] Length = 645 Score = 250 bits (638), Expect = 4e-64, Method: Composition-based stats. Identities = 79/433 (18%), Positives = 168/433 (38%), Gaps = 30/433 (6%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L T + +G+ WLP G + I +++ G Sbjct: 237 LRMLEEAKERDHRKLGKELKLFTN-SQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGY 295 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG ++ Y M + +++ ++ P + ++++ I SYR Sbjct: 296 DHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYR 355 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K ++ L ++ Sbjct: 356 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYK 415 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 GL++ R + ADT + + + + D++ Sbjct: 416 DFGLENYSFRLS-----------YRDPADTK--KYYADDEMWEKAQGMLKEAMDEMGLDY 462 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y DV ++ +L +++ +S ++ F ++ ++ G D Sbjct: 463 YEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERF----ELSYVGED 511 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 GK H + G + + + + +P +AP + +I + QV D + Sbjct: 512 GKQHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQAQVIPVSP--QVHLDYAK 567 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+ L + G V D E+IG + A + P ++VG V+++ V ++ Sbjct: 568 KVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKS 627 Query: 427 EDMSLEEVINYAS 439 E ++L+ ++ Sbjct: 628 ETIALDAFVDMIK 640 >gi|34763461|ref|ZP_00144407.1| Threonyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|237741623|ref|ZP_04572104.1| threonyl-tRNA synthetase [Fusobacterium sp. 4_1_13] gi|294785766|ref|ZP_06751054.1| threonine--tRNA ligase [Fusobacterium sp. 3_1_27] gi|27886876|gb|EAA24002.1| Threonyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|229429271|gb|EEO39483.1| threonyl-tRNA synthetase [Fusobacterium sp. 4_1_13] gi|294487480|gb|EFG34842.1| threonine--tRNA ligase [Fusobacterium sp. 3_1_27] Length = 637 Score = 250 bits (638), Expect = 4e-64, Method: Composition-based stats. Identities = 81/443 (18%), Positives = 163/443 (36%), Gaps = 41/443 (9%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R K+ + + RD +L L + ++ G +LP G + + + R+E Sbjct: 226 RLKKHLKLMEEAEKRDHRKLGKELELF--FLSEYGPGFPFFLPKGMIIRNVLIDLWRKEH 283 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G +++ P + + +LW SG + +Y + M ++ ++ P + F+ Sbjct: 284 EKAGYLQLETPIMLNKELWEISGHWFNYRENMYT-SEIDELEFAIKPMNCPGGVLSFKHQ 342 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP ++ R E G+MR R F D++ F +TP+ + + Sbjct: 343 LHSYKDLPARLAELGRVHRHEFSGALHGLMRVRSFTQDDSHIF-MTPDQVQDEIIGVVNL 401 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + + +L + + P S E D + D Sbjct: 402 IDKFYSKLFGFEYEIELSTKPEKAIGSQE-----------------IWDMAEAALAGALD 444 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I A Y D K+ D++ + ++ F ++ Sbjct: 445 KLGRKYKINPGDGAFYGPKLDF---KIKDAIGRMWQCGTIQLD----FNLPERFD----V 493 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 T+ G DG+ H + G++ ++ + G +W V ++L + Sbjct: 494 TYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFPMWLAPVQVKVLTL------ND 547 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEI 418 C ++I +L ++G DD E IG + A+ P+Q+I+G V + V I Sbjct: 548 ECIPYAKEIMNKLEELGIRAELDDRNETIGYKIREANGKYKIPMQLIIGKNEVENKGVNI 607 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + + L+E NY Sbjct: 608 RRFGSKDQFTKPLDEFYNYVVDE 630 >gi|289523104|ref|ZP_06439958.1| threonine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503647|gb|EFD24811.1| threonine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 624 Score = 250 bits (638), Expect = 4e-64, Method: Composition-based stats. Identities = 82/438 (18%), Positives = 145/438 (33%), Gaps = 41/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L + + + + G + P G L+ + R+ + G Sbjct: 218 YLAKVEEAKRRDHRRLGKELDIFS--MQSEAPGFPFFHPKGVVVLNVLVDFWRKVHVQRG 275 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + DLW+ SG +D Y + M + + K P + +++S ++SY Sbjct: 276 YQEIKTPLILDQDLWIRSGHWDHYRENM-YFTEIDGKPFAIKPMNCPGGILVYKSQLRSY 334 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+ P ++ + R E G+MR R F DA+ F T + K + I Sbjct: 335 RDFPLKLAELGVVHRHERSGVLHGLMRVRCFTQDDAHIF-TTEDHIKEEIIDIMNIVKYI 393 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G V T K D + DD Sbjct: 394 YGVFGFPY------------------HVELSTRPENAMGEKALWDRAEQALQEALDDQGV 435 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y D H E R + G I + T+ G Sbjct: 436 EYKLNPGDGAFYGPKIDFHLED----------CIGRTWQCGTI-QLDFQMPEKFDITYIG 484 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + +G++ ++ + G W + I Sbjct: 485 PDGEPHRPVMIHRTVLGSLERFLGILIEQYAGAFPYW------LAPVQVKILPVSDEHLT 538 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + + L K V D +G + A + P +I+G++ V + V ++ R Sbjct: 539 YAKNVASLLQKQDVRVEVDRKEGTLGKKIRDAQMQKTPYMIIIGNREVENEVVSVRDRSK 598 Query: 424 GIREDMSLEEVINYASHR 441 G MSLE + S+ Sbjct: 599 GDLGSMSLEALKELLSNE 616 >gi|114152266|sp|Q2LTR7|SYP_SYNAS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 578 Score = 250 bits (638), Expect = 4e-64, Method: Composition-based stats. Identities = 134/251 (53%), Positives = 169/251 (67%), Gaps = 1/251 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ FLP +E P DAE+ SH+LMLR GMI + S GIYS+LPLG + L V IIREE Sbjct: 1 MRYSEMFLPTEREIPSDAEVVSHQLMLRAGMIRKLSAGIYSYLPLGYRVLRKVEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P +Q A+LW ESGR++ YGKE+LR DR+D+ GPTHEEV+TD+ R Sbjct: 61 MNRAGAQEVYLPMVQPAELWQESGRWEHYGKELLRFRDRHDREYCLGPTHEEVITDLVRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IK+YR LP YQIQ KFRDE+RPRFGVMR REF MKDAYSFD EG++ SY KMF + Sbjct: 121 EIKTYRQLPKNLYQIQTKFRDEIRPRFGVMRGREFGMKDAYSFDADEEGAEISYQKMFEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GL+ P+ A+SG IGG SHEF+V+AD+GE + + E + Sbjct: 181 YKRIFARCGLRFRPVEADSGTIGGSFSHEFMVMADSGEDGLVFCATCS-YAANLEKAEVH 239 Query: 241 DIISLNSIVEQ 251 + ++ Sbjct: 240 PPEKMEISNDE 250 Score = 173 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 114/202 (56%), Gaps = 2/202 (0%) Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSAT 301 L ++ E +A +D+ + DS P + ARGIEVGH+F GTKYS M A+ Sbjct: 367 HLRNVNEGRDFQISAFADLKVARETDSCPRCQGALKFARGIEVGHVFKLGTKYSKAMGAS 426 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + +GK+ + MG YGIG R VAA IE +HD GI+WP ++P+++ + + +D+ Sbjct: 427 YLDKNGKEQIMIMGCYGIGTGRTVAACIEQNHDENGIVWPMPISPYQVIITPVNMNDKAL 486 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + E++Y L+ G +V DD E+ G +F ADL+G P++V VG K +++ KVE++ R Sbjct: 487 AETAERLYESLAGKGAEVLLDDRDERAGVKFKDADLIGIPIRVTVGPKKLAEGKVEVRLR 546 Query: 422 LTGIREDMSLEEVINYASHRFS 443 TG D+ ++ V Sbjct: 547 DTGETSDVQVDSVEKMILRVIE 568 >gi|210623612|ref|ZP_03293938.1| hypothetical protein CLOHIR_01888 [Clostridium hiranonis DSM 13275] gi|210153482|gb|EEA84488.1| hypothetical protein CLOHIR_01888 [Clostridium hiranonis DSM 13275] Length = 638 Score = 250 bits (638), Expect = 4e-64, Method: Composition-based stats. Identities = 87/441 (19%), Positives = 156/441 (35%), Gaps = 42/441 (9%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L MI + G LP G + + RE Sbjct: 231 LHMLEEAKKRDHRKLGKELGLF--MIPEEGPGFPLMLPKGMALKNALLEYWREVHRAAEY 288 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 +E+ P + + LW SG + Y + M + +++ P + ++S + SYR Sbjct: 289 VEIETPIILNRKLWETSGHWYHYKENMYTVK-IDEEDYAIKPMNCPGGMLYYKSEMHSYR 347 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 + P ++ R EL G+MR R F DA+ F L + + I+ Sbjct: 348 DFPMRVAELGRVHRHELSGALHGLMRVRAFTQDDAHIFMLPEQIRDE-IKGVISLIDGIY 406 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G + + + P S E + +++ Sbjct: 407 KTFGFEYH-LELSTRPEDSMGSDE-----------------EWEAAENGLRGALEELNLP 448 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + E A Y D H L D + + +++ F AT+ G Sbjct: 449 FVVNEGDGAFYGPKIDFH---LTDCIGRTWQCGTIQLDMQLPRQFD--------ATYIGQ 497 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H + G++ ++ + +P +AP ++ +I I D Sbjct: 498 DGEKHRPVMIHRVAFGSIERFIGILI---EQYAGKFPVWLAPTQVKIIPISDK---YADY 551 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 EK+ L G V D E++G + A L P VIVG K +++ + ++ R G Sbjct: 552 AEKVRKELFDNGLRVEVDGRVEKVGFKIREAQLEKVPYMVIVGEKEEAENNISVRSRDEG 611 Query: 425 IREDMSLEEVINYASHRFSNN 445 ++ L + I + + Sbjct: 612 ELGNVELAKFIEDVQAKVKSR 632 >gi|304391869|ref|ZP_07373811.1| threonyl-tRNA synthetase [Ahrensia sp. R2A130] gi|303296098|gb|EFL90456.1| threonyl-tRNA synthetase [Ahrensia sp. R2A130] Length = 663 Score = 250 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 79/444 (17%), Positives = 152/444 (34%), Gaps = 36/444 (8%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L +L+E RD ++ L + G+ W G K ++ + +R Sbjct: 231 KQLKQYLHMLEEAQKRDHRKLGREMDLF--HFQEEGPGVVFWHAKGWKVFQHLVSYMRRR 288 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E++ P + LW SG + Y + M +++ P + IF++ Sbjct: 289 IEEHGYDEVNAPQILDKALWETSGHWGWYRENMFTTVTEDERQFAIKPMNCPGHVQIFKN 348 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 ++SYR LP + R E G+MR R F DA+ F TPE + ++ Sbjct: 349 GLRSYRELPVKMAEFGNVHRYEPSGALHGLMRVRGFTQDDAHVFC-TPEQLEEECLRIND 407 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L + G I ++ + P S E ++ +V E Sbjct: 408 LILSTYSDFGFGDIVVKLSTRPEKRVGSEEGWDRSEEIMGKVL------------EKIAA 455 Query: 240 DDIISLNSIV-EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 D + + + A Y + L D++ + + ++ FG Sbjct: 456 DSDGRIKTELNPGEGAFYGPKFEY---VLRDAIGRDWQCGTTQVDFALPERFG------- 505 Query: 299 SATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 A + D + + G+M ++ G +W + + Sbjct: 506 -AFYIDKDSQKQEPVMVHRAICGSMERFIGILIEHFAGHFPLW------ISPLQVVVATI 558 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 E + L + G V D E+I + L P+ + VG + + V Sbjct: 559 TSEADPYGEIVAEELREAGLRVETDFRNEKINYKVREHSLAKVPVIIAVGGREAEERTVS 618 Query: 418 IKHRLTGIREDMSLEEVINYASHR 441 ++ + + M+L+E + S Sbjct: 619 VRRLGSKHQTSMTLDEAVASLSDE 642 >gi|296101364|ref|YP_003611510.1| prolyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055823|gb|ADF60561.1| prolyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 572 Score = 250 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+KM+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSHESLQETYDKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDS-SDYAANIE 234 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 112/189 (59%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF G KYS ++A +G DG++ + MG Sbjct: 383 EVADIRNVVAGDPSPDGQGTLMIKRGIEVGHIFQLGDKYSRALNAAVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSK 374 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+YA L Sbjct: 443 CYGIGVTRVVAAAIEQNYDERGIVWPDNIAPFQVAILPMNMHKSYRVQELAEKLYAELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + ++E K+R +G ++ + ++ Sbjct: 503 QGIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDSDEIEYKYRRSGEKQMIKTGDI 562 Query: 435 INYASHRFS 443 ++Y Sbjct: 563 LDYLVKAIK 571 >gi|290580052|ref|YP_003484444.1| putative threonyl-tRNA synthetase [Streptococcus mutans NN2025] gi|254996951|dbj|BAH87552.1| putative threonyl-tRNA synthetase [Streptococcus mutans NN2025] Length = 649 Score = 250 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 79/450 (17%), Positives = 156/450 (34%), Gaps = 37/450 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 KY + RD +L L MI + +G+ WLP G + I +++ Sbjct: 228 LKKYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPDGATIRRIIERYITDKE 285 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRS 120 +G + P + S DL+ SG +D Y ++M D D + P + +++++ Sbjct: 286 VASGYQHVYTPPIASVDLYKTSGHWDHYREDMFPTMDMGDGESFVLRPMNCPHHIEVYKN 345 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 H+ SYR LP ++ + R E ++ + + + + + + + Sbjct: 346 HVHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVEDEFKRTLQL 405 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDF 239 + ++ L R D +T + D + Sbjct: 406 IIDVYEDFNLTDYSFRLS--------------YRDPNDTHKYFDDDEMWEKSQTMLKAAM 451 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 DD+ E A Y D+ ++ +L ++ +S ++ F ++ Sbjct: 452 DDMGLDYYEAEGEAAFYGPKLDI---QVKTALGNDETLSTIQLD----FLLPERF----E 500 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 T+ GADG++H + + M A + ++ G W I + Sbjct: 501 LTYIGADGEEHRPVMIHRGIVSTMERFTAYLIETYKGAFPTWLAPHQVT-----VIPISN 555 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + D ++ L G DD E++ + + P Q+IVG K V V + Sbjct: 556 EAHIDYAWEVAKELRDHGIRADVDDRNEKMQYKIRQSQTKKVPYQLIVGDKEVESGTVNV 615 Query: 419 KHRLTGIREDMSLEEV-INYASHRFSNNRP 447 + + S+ E N + +RP Sbjct: 616 RRYGSKQTHTESIAEFRENILADIKRKSRP 645 >gi|70728636|ref|YP_258385.1| prolyl-tRNA synthetase [Pseudomonas fluorescens Pf-5] gi|114152231|sp|Q4KH98|SYP_PSEF5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|68342935|gb|AAY90541.1| prolyl-tRNA synthetase [Pseudomonas fluorescens Pf-5] Length = 571 Score = 250 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 116/237 (48%), Positives = 160/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + + V AI+REE Sbjct: 1 MRTSQYLLATQKETPSDAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P+ Q A+LW ESGR++ YG E+LR DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEVLMPSTQPAELWQESGRWEEYGPELLRFKDRHGRDFCAGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M + Sbjct: 121 ELSSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQVTYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y +F RLGLK P+ A++G IGG SHEF VLA++GE + + D+ E Sbjct: 181 YCNVFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVF-SNGSDYAANIEKA 236 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 112/207 (54%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ K RGIEVGHIF G KYS M Sbjct: 364 DDKHYFGVNWERDLPVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGNKYSKAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK ++MG YGIG RVVAA IE ++D GIIW D++APF+I+L+ ++ Sbjct: 424 KCEVLGENGKPVTLEMGCYGIGVSRVVAAAIEQNNDANGIIWSDTLAPFQIALVPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + R+A +K+Y+ L+ G +V DD + G +FA +L+G P +++V + +++ + Sbjct: 484 EQVREATDKLYSELTAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNL 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K R + + + +V+++ R Sbjct: 544 EYKSRTEAEAQALPVADVLSFLQARIR 570 >gi|332201058|gb|EGJ15129.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA47901] Length = 647 Score = 250 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 77/444 (17%), Positives = 155/444 (34%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I ++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVNKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYEDFNLTDYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QIKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GAD +DH M G+ + I + + + I ++ Sbjct: 503 YIGADSEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +S++ + +N Sbjct: 619 GQKETQTVSVDNFVQAILADIANK 642 >gi|269468339|gb|EEZ80013.1| threonyl-tRNA synthetase [uncultured SUP05 cluster bacterium] Length = 630 Score = 250 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 74/436 (16%), Positives = 139/436 (31%), Gaps = 38/436 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD L + + + G+ W G V +R Sbjct: 231 YLYRLEEAEKRDHRKIGKTQDLF--HMQEEAPGMVFWHEKGWTLYQIVEQYMRSVFRDND 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L LW +SG +D +G M ++ P + I+ +KSY Sbjct: 289 YKEVHTPQLIDRTLWEKSGHWDKFGDAMFT-TSSENRDYAVKPMNCPAHIQIYNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ D + F T + + + Sbjct: 348 RDLPLRLAEFGSCHRNEPSGTLHGIMRVRNFVQDDGHIFC-TENQIQDEVSTFIDLTFDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G +++ ++ + P S E D S D Sbjct: 407 YKNFGFENVDIKLSTRPEKRVGSDE-----------------VWDRAEASLAEALDAKGI 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y + L D L + ++ F + A Sbjct: 450 KWELQEGEGAFYGPKIEF---VLKDCLDREWQCGTLQVD----FSMPERLDAHYIAE--- 499 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + K V + +G++ ++ ++G W I + D Sbjct: 500 DNSKQTPVMLHRAIVGSLERFVGILIEHYEGAFPSW------LAPIQAVILNISEKQHDF 553 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + +L K G V D E+IG + + +P ++VG + + + ++ ++ R Sbjct: 554 VANVEKKLKKQGLRVISDLRNEKIGFKIREHSMQRYPYILVVGGREMENDEISVRKRGGE 613 Query: 425 IREDMSLEEVINYASH 440 MS+E + Sbjct: 614 DLGSMSIEAFVKLVKE 629 >gi|42783753|ref|NP_981000.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 10987] gi|206969938|ref|ZP_03230892.1| threonyl-tRNA synthetase [Bacillus cereus AH1134] gi|218234238|ref|YP_002369371.1| threonyl-tRNA synthetase [Bacillus cereus B4264] gi|228923319|ref|ZP_04086607.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228954844|ref|ZP_04116864.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960844|ref|ZP_04122479.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229048283|ref|ZP_04193851.1| Threonyl-tRNA synthetase [Bacillus cereus AH676] gi|229072077|ref|ZP_04205286.1| Threonyl-tRNA synthetase [Bacillus cereus F65185] gi|229081828|ref|ZP_04214320.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-2] gi|229112040|ref|ZP_04241583.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-15] gi|229129859|ref|ZP_04258825.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|229147134|ref|ZP_04275493.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|229152770|ref|ZP_04280953.1| Threonyl-tRNA synthetase [Bacillus cereus m1550] gi|229180894|ref|ZP_04308229.1| Threonyl-tRNA synthetase [Bacillus cereus 172560W] gi|229192776|ref|ZP_04319734.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 10876] gi|229198724|ref|ZP_04325422.1| Threonyl-tRNA synthetase [Bacillus cereus m1293] gi|296505048|ref|YP_003666748.1| threonyl-tRNA synthetase [Bacillus thuringiensis BMB171] gi|42739683|gb|AAS43608.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 10987] gi|206735626|gb|EDZ52794.1| threonyl-tRNA synthetase [Bacillus cereus AH1134] gi|218162195|gb|ACK62187.1| threonine--tRNA ligase [Bacillus cereus B4264] gi|228584746|gb|EEK42866.1| Threonyl-tRNA synthetase [Bacillus cereus m1293] gi|228590615|gb|EEK48476.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 10876] gi|228602451|gb|EEK59937.1| Threonyl-tRNA synthetase [Bacillus cereus 172560W] gi|228630590|gb|EEK87236.1| Threonyl-tRNA synthetase [Bacillus cereus m1550] gi|228636383|gb|EEK92854.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|228653550|gb|EEL09422.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|228671363|gb|EEL26664.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-15] gi|228701416|gb|EEL53910.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-2] gi|228711011|gb|EEL62977.1| Threonyl-tRNA synthetase [Bacillus cereus F65185] gi|228723008|gb|EEL74385.1| Threonyl-tRNA synthetase [Bacillus cereus AH676] gi|228798866|gb|EEM45845.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228804833|gb|EEM51432.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228836273|gb|EEM81626.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|296326100|gb|ADH09028.1| threonyl-tRNA synthetase [Bacillus thuringiensis BMB171] gi|324328469|gb|ADY23729.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 645 Score = 250 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 79/433 (18%), Positives = 169/433 (39%), Gaps = 30/433 (6%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L T + +G+ WLP G + I +++ G Sbjct: 237 LRMLEEAKERDHRKLGKELKLFTN-SQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGY 295 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG ++ Y M + +++ ++ P + ++++ I SYR Sbjct: 296 DHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYR 355 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K ++ L ++ Sbjct: 356 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYK 415 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 GL++ R + ADT + + + + D++ Sbjct: 416 DFGLENYSFRLS-----------YRDPADTK--KYYADDEMWEKAQGMLKEAMDEMGLDY 462 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y DV ++ +L +++ +S ++ F ++ ++ G D Sbjct: 463 YEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERF----ELSYVGED 511 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 GK H + G + + + + +P +AP ++ +I + QV D + Sbjct: 512 GKQHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVQVIPVSP--QVHLDYAK 567 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+ L + G V D E+IG + A + P ++VG V+++ V ++ Sbjct: 568 KVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKS 627 Query: 427 EDMSLEEVINYAS 439 E ++L+ ++ Sbjct: 628 ETIALDAFVDMIK 640 >gi|329928815|ref|ZP_08282654.1| threonine--tRNA ligase [Paenibacillus sp. HGF5] gi|328937458|gb|EGG33879.1| threonine--tRNA ligase [Paenibacillus sp. HGF5] Length = 645 Score = 250 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 85/442 (19%), Positives = 168/442 (38%), Gaps = 37/442 (8%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L + T +G+ WLP G K + I + + R G Sbjct: 235 LRLLEEAKKRDHRKLGKELQMFT-FSQLVGQGLPIWLPNGAKLRRTLERYIVDMEERLGY 293 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L + +L+ SG ++ Y ++M + +++ ++ P + +++S + SYR Sbjct: 294 QHVYTPVLGNVELYKTSGHWEHYQEDMFPKMEMDNEELVLRPMNCPHHMMVYKSDMHSYR 353 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ ++ R E+ G+ R R + D++ F P+ K + ++ + ++ Sbjct: 354 DLPIRIAELGMQHRYEMSGALTGLHRVRAMTLNDSHIFCR-PDQIKEEFARVIQLIMTVY 412 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS-KDFMDFPIPSENTDFDDIIS 244 G+ R D +T+ + + + + + Sbjct: 413 KDFGIHDYRFRLS--------------YRDPQDTEKYFQNDEMWEMSQRMLREVVESLDM 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ +L + + +S ++ F ++ + G Sbjct: 459 PFYEAEGEAAFYGPKLDV---QIRTALGKEETLSTVQLD----FLLPERF----ELEYVG 507 Query: 305 ADGKDHYVQMGSYGI-GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + GI G M A + + G +W V I + N D Sbjct: 508 DDGQKHRPVVIHRGILGTMERFTAFLLENFAGALPLWLSPVQVKVIPVSN------AFED 561 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L G V D E++G + A L P IVG S V ++ R Sbjct: 562 YAKEVAEKLQFAGISVEPDLRNEKLGYKIREAQLEKIPYMFIVGENEKSAGAVSVRKRGE 621 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G L+E+I + + Sbjct: 622 GDIGAQPLDEIILKLREEINTH 643 >gi|284037110|ref|YP_003387040.1| threonyl-tRNA synthetase [Spirosoma linguale DSM 74] gi|283816403|gb|ADB38241.1| threonyl-tRNA synthetase [Spirosoma linguale DSM 74] Length = 647 Score = 250 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 83/442 (18%), Positives = 156/442 (35%), Gaps = 38/442 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + G+ WLP G + + +R+ Q R G Sbjct: 237 YLFLLEEAKKRDHRKLGKELELFA-FSEKVGAGLPLWLPKGTVLRERLENFLRKAQVRAG 295 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIK 123 + P + S L+V SG ++ YG++ + ++ + P + +I+++ + Sbjct: 296 YSPVVTPHIGSKQLYVTSGHWEKYGEDSFQPIRTPDPNEEFLLKPMNCPHHCEIYKTKPR 355 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + +R E G+ R R F DA+ F P+ K + K+ L Sbjct: 356 SYRDLPLRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCR-PDQVKEEFMKVIDLVL 414 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +F+ LG + D + D + S + Sbjct: 415 YVFNTLGFSDYSAQISLR--------------DPENKTKYIGSDDLWEKAESAIIEAAAE 460 Query: 243 ISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 L ++ E A Y D + D++ ++ ++ F Sbjct: 461 KGLPTVTELGEAAFYGPKLDFM---VRDAIGRKWQLGTIQVDYNLPNRF--------ELE 509 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + GAD + H + G+M A++ + G +W I I + Sbjct: 510 YIGADNQKHRPVMIHRAPFGSMERFIAILIENSGGNFPLW------LSPDQIAILPISEK 563 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ L + F D E+IG + A++ P +IVG K ++ V ++ Sbjct: 564 YEDYANDLFFSLQENDIRGFVDLRDEKIGRKIRDAEVNKVPYMLIVGEKEAAEGTVSVRR 623 Query: 421 RLTGIREDMSLEEVINYASHRF 442 + G M + + I Sbjct: 624 KGQGDLGSMPIADFIQTFKREV 645 >gi|191167053|ref|ZP_03028875.1| prolyl-tRNA synthetase [Escherichia coli B7A] gi|309796373|ref|ZP_07690782.1| prolyl-tRNA synthetase [Escherichia coli MS 145-7] gi|190902946|gb|EDV62673.1| prolyl-tRNA synthetase [Escherichia coli B7A] gi|308120077|gb|EFO57339.1| prolyl-tRNA synthetase [Escherichia coli MS 145-7] Length = 572 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 133/294 (45%), Positives = 178/294 (60%), Gaps = 5/294 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E + Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDT-SDYAANIELAEAI 239 Query: 241 DIISLNSIVEQW----TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + Q P A T E+ + + + G F Sbjct: 240 APKEPRAAAAQEMTLVDTPNAKTIAELVEQFNLPIEKTVKTLLVKAVEGSSFPL 293 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 112/189 (59%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 383 EVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 443 CYGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++ Sbjct: 503 QGIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDI 562 Query: 435 INYASHRFS 443 + Y + Sbjct: 563 VEYLVKQIK 571 >gi|228994292|ref|ZP_04154183.1| Threonyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] gi|228765442|gb|EEM14105.1| Threonyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] Length = 641 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 80/443 (18%), Positives = 154/443 (34%), Gaps = 42/443 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + R+ ++L L M + + G+ +LP GQ + + + +RE Q Sbjct: 235 YLHFVEEAAKRNHRKLGNELELF--MFSEEAPGMPFYLPKGQIVRNELESFLREIQQNYD 292 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW ESG +D Y M ++ ++K+ P + IF++ + SY Sbjct: 293 YQEVRTPIMMNQGLWEESGHWDHYKDNM-YFSEVDNKSFALKPMNCPGHMLIFKNKLHSY 351 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R E G++R R F DA+ +TPE + + + Sbjct: 352 RDLPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIESEIKSVLKQIDYV 410 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + + P E A++ S + Sbjct: 411 YRTFGFEYE-VELSTRPEDSMGDDELWNQAES-----------------SLENVLKSLNY 452 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H + D+L + + ++ F K+ + Sbjct: 453 NYRVNEGDGAFYGPKIDFH---IKDALQRSHQCGTVQLD----FQMPEKFD----LNYID 501 Query: 305 ADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + + R + +IE + + I +QV Sbjct: 502 ERNEKRRPVVIHRAVLGSFDRFLGILIEHFGGAFPTWLAP------VQIKVIPVSNQVHE 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 ++I +L VG D E++G + A L P +++G K + + V ++ Sbjct: 556 QYTKEIEEKLKSVGLRAERDARSEKLGYKIREAQLQKIPYILVIGDKEMENGSVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 E +SL + N Sbjct: 616 EEKSEVVSLSAFMESIRKEVYNK 638 >gi|332282869|ref|ZP_08395282.1| prolyl-tRNA synthetase [Shigella sp. D9] gi|332105221|gb|EGJ08567.1| prolyl-tRNA synthetase [Shigella sp. D9] Length = 590 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 19 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 78 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 79 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 138 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 139 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 198 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 199 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDT-SDYAANIE 252 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 66/187 (35%), Positives = 112/187 (59%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 403 ADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 462 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 463 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 522 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 523 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVE 582 Query: 437 YASHRFS 443 Y + Sbjct: 583 YLVKQIK 589 >gi|320180897|gb|EFW55819.1| prolyl-tRNA synthetase [Shigella boydii ATCC 9905] Length = 572 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDT-SDYAANIE 234 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 66/187 (35%), Positives = 112/187 (59%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 385 ADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 445 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 505 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVE 564 Query: 437 YASHRFS 443 Y + Sbjct: 565 YLVKQIK 571 >gi|309700402|emb|CBI99691.1| prolyl-tRNA synthetase [Escherichia coli ETEC H10407] Length = 572 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDT-SDYAANIE 234 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 65/187 (34%), Positives = 112/187 (59%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 385 ADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 445 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R ++ + ++++ Sbjct: 505 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNCEKQLIKTGDIVD 564 Query: 437 YASHRFS 443 Y + Sbjct: 565 YLVKQIK 571 >gi|300920118|ref|ZP_07136571.1| prolyl-tRNA synthetase [Escherichia coli MS 115-1] gi|300412852|gb|EFJ96162.1| prolyl-tRNA synthetase [Escherichia coli MS 115-1] Length = 572 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDT-SDYAANIE 234 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 66/187 (35%), Positives = 112/187 (59%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 385 ADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 445 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 505 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVE 564 Query: 437 YASHRFS 443 Y + Sbjct: 565 YLVKQIK 571 >gi|260866343|ref|YP_003232745.1| prolyl-tRNA synthetase [Escherichia coli O111:H- str. 11128] gi|257762699|dbj|BAI34194.1| prolyl-tRNA synthetase [Escherichia coli O111:H- str. 11128] Length = 572 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDT-SDYAANIE 234 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 67/189 (35%), Positives = 112/189 (59%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 383 EVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 443 CYGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++ Sbjct: 503 QGIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDI 562 Query: 435 INYASHRFS 443 I Y + Sbjct: 563 IEYLVKQIK 571 >gi|254037614|ref|ZP_04871691.1| prolyl-tRNA synthetase [Escherichia sp. 1_1_43] gi|226840720|gb|EEH72722.1| prolyl-tRNA synthetase [Escherichia sp. 1_1_43] Length = 590 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 19 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 78 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 79 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 138 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 139 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 198 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 199 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDT-SDYAANIE 252 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 112/189 (59%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 401 EVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 460 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 461 CYGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 520 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++ Sbjct: 521 QGIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDI 580 Query: 435 INYASHRFS 443 + Y + Sbjct: 581 VEYLVKQIK 589 >gi|218703449|ref|YP_002410968.1| prolyl-tRNA synthetase [Escherichia coli UMN026] gi|293403264|ref|ZP_06647361.1| prolyl-tRNA synthetase [Escherichia coli FVEC1412] gi|293408287|ref|ZP_06652127.1| prolyl-tRNA synthetase [Escherichia coli B354] gi|298378800|ref|ZP_06988684.1| prolyl-tRNA synthetase [Escherichia coli FVEC1302] gi|300900763|ref|ZP_07118909.1| prolyl-tRNA synthetase [Escherichia coli MS 198-1] gi|301025919|ref|ZP_07189405.1| prolyl-tRNA synthetase [Escherichia coli MS 69-1] gi|331661569|ref|ZP_08362493.1| proline--tRNA ligase [Escherichia coli TA143] gi|226701283|sp|B7N862|SYP_ECOLU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|218430546|emb|CAR11412.1| prolyl-tRNA synthetase [Escherichia coli UMN026] gi|284919970|emb|CBG33025.1| prolyl-tRNA synthetase [Escherichia coli 042] gi|291430179|gb|EFF03193.1| prolyl-tRNA synthetase [Escherichia coli FVEC1412] gi|291472538|gb|EFF15020.1| prolyl-tRNA synthetase [Escherichia coli B354] gi|298281134|gb|EFI22635.1| prolyl-tRNA synthetase [Escherichia coli FVEC1302] gi|300355748|gb|EFJ71618.1| prolyl-tRNA synthetase [Escherichia coli MS 198-1] gi|300395774|gb|EFJ79312.1| prolyl-tRNA synthetase [Escherichia coli MS 69-1] gi|331061484|gb|EGI33447.1| proline--tRNA ligase [Escherichia coli TA143] gi|332341528|gb|AEE54862.1| prolyl-tRNA synthetase ProS [Escherichia coli UMNK88] Length = 572 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDT-SDYAANIE 234 Score = 174 bits (440), Expect = 4e-41, Method: Composition-based stats. Identities = 66/187 (35%), Positives = 113/187 (60%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 385 ADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 445 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++++ Sbjct: 505 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVD 564 Query: 437 YASHRFS 443 Y + Sbjct: 565 YLVKQIK 571 >gi|218693660|ref|YP_002401327.1| prolyl-tRNA synthetase [Escherichia coli 55989] gi|256021628|ref|ZP_05435493.1| prolyl-tRNA synthetase [Shigella sp. D9] gi|293476853|ref|ZP_06665261.1| prolyl-tRNA synthetase [Escherichia coli B088] gi|300921804|ref|ZP_07137964.1| prolyl-tRNA synthetase [Escherichia coli MS 182-1] gi|301325160|ref|ZP_07218690.1| prolyl-tRNA synthetase [Escherichia coli MS 78-1] gi|254782900|sp|B7LHA4|SYP_ECO55 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|218350392|emb|CAU96077.1| prolyl-tRNA synthetase [Escherichia coli 55989] gi|291321306|gb|EFE60748.1| prolyl-tRNA synthetase [Escherichia coli B088] gi|300421799|gb|EFK05110.1| prolyl-tRNA synthetase [Escherichia coli MS 182-1] gi|300847966|gb|EFK75726.1| prolyl-tRNA synthetase [Escherichia coli MS 78-1] gi|323935035|gb|EGB31408.1| prolyl-tRNA synthetase [Escherichia coli E1520] Length = 572 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDT-SDYAANIE 234 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 66/187 (35%), Positives = 112/187 (59%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 385 ADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 445 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 505 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVE 564 Query: 437 YASHRFS 443 Y + Sbjct: 565 YLVKQIK 571 >gi|82775586|ref|YP_401933.1| prolyl-tRNA synthetase [Shigella dysenteriae Sd197] gi|114152251|sp|Q32JR3|SYP_SHIDS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|81239734|gb|ABB60444.1| proline tRNA synthetase [Shigella dysenteriae Sd197] Length = 572 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDT-SDYAANIE 234 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 112/189 (59%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 383 EVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 443 CYGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++ Sbjct: 503 QGIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDI 562 Query: 435 INYASHRFS 443 + Y + Sbjct: 563 VEYLVKQIK 571 >gi|16128187|ref|NP_414736.1| prolyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655] gi|89107075|ref|AP_000855.1| prolyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110] gi|170079831|ref|YP_001729151.1| prolyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B] gi|238899593|ref|YP_002925389.1| prolyl-tRNA synthetase [Escherichia coli BW2952] gi|34395980|sp|P16659|SYP_ECOLI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Global RNA synthesis factor; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701282|sp|B1XD64|SYP_ECODH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|259511593|sp|C4ZRT7|SYP_ECOBW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|1552770|gb|AAB08622.1| proline-tRNA ligase [Escherichia coli] gi|1786392|gb|AAC73305.1| prolyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655] gi|85674379|dbj|BAA77870.2| prolyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110] gi|169887666|gb|ACB01373.1| prolyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B] gi|238863283|gb|ACR65281.1| prolyl-tRNA synthetase [Escherichia coli BW2952] gi|260450602|gb|ACX41024.1| prolyl-tRNA synthetase [Escherichia coli DH1] gi|315134885|dbj|BAJ42044.1| prolyl-tRNA synthetase [Escherichia coli DH1] Length = 572 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDT-SDYAANIE 234 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 112/189 (59%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 383 EVADIRNVVAGDPSPDGQGRLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 443 CYGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++ Sbjct: 503 QGIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDI 562 Query: 435 INYASHRFS 443 + Y + Sbjct: 563 VEYLVKQIK 571 >gi|15799876|ref|NP_285888.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 EDL933] gi|15829450|ref|NP_308223.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai] gi|168752178|ref|ZP_02777200.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113] gi|168765280|ref|ZP_02790287.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501] gi|168769963|ref|ZP_02794970.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486] gi|168777697|ref|ZP_02802704.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196] gi|168782925|ref|ZP_02807932.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076] gi|168789305|ref|ZP_02814312.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869] gi|168802460|ref|ZP_02827467.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508] gi|195939891|ref|ZP_03085273.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024] gi|208809448|ref|ZP_03251785.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206] gi|208812619|ref|ZP_03253948.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045] gi|208821168|ref|ZP_03261488.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042] gi|209398549|ref|YP_002268803.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115] gi|217324314|ref|ZP_03440398.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588] gi|254791327|ref|YP_003076164.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359] gi|261226949|ref|ZP_05941230.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000] gi|261255353|ref|ZP_05947886.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966] gi|291281017|ref|YP_003497835.1| Prolyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615] gi|81848971|sp|Q8X8W2|SYP_ECO57 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226731431|sp|B5Z0H4|SYP_ECO5E RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|12512925|gb|AAG54496.1|AE005195_5 proline tRNA synthetase [Escherichia coli O157:H7 str. EDL933] gi|13359652|dbj|BAB33619.1| proline tRNA synthetase [Escherichia coli O157:H7 str. Sakai] gi|187767123|gb|EDU30967.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196] gi|188013912|gb|EDU52034.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113] gi|188999651|gb|EDU68637.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076] gi|189361055|gb|EDU79474.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486] gi|189364925|gb|EDU83341.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501] gi|189371068|gb|EDU89484.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869] gi|189375548|gb|EDU93964.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508] gi|208729249|gb|EDZ78850.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206] gi|208733896|gb|EDZ82583.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045] gi|208741291|gb|EDZ88973.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042] gi|209159949|gb|ACI37382.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115] gi|209745624|gb|ACI71119.1| proline tRNA synthetase [Escherichia coli] gi|209745626|gb|ACI71120.1| proline tRNA synthetase [Escherichia coli] gi|209745628|gb|ACI71121.1| proline tRNA synthetase [Escherichia coli] gi|209745630|gb|ACI71122.1| proline tRNA synthetase [Escherichia coli] gi|209745632|gb|ACI71123.1| proline tRNA synthetase [Escherichia coli] gi|217320535|gb|EEC28959.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588] gi|254590727|gb|ACT70088.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359] gi|290760890|gb|ADD54851.1| Prolyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615] gi|320190279|gb|EFW64929.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212] gi|320640001|gb|EFX09586.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101] gi|320644771|gb|EFX13815.1| prolyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89] gi|320652927|gb|EFX21165.1| prolyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687] gi|320658315|gb|EFX26044.1| prolyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320663625|gb|EFX30909.1| prolyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905] gi|320668938|gb|EFX35733.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61] gi|326339750|gb|EGD63558.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044] gi|326345084|gb|EGD68827.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125] Length = 572 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDT-SDYAANIE 234 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 112/189 (59%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 383 EVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 443 CYGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++ Sbjct: 503 QGIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDI 562 Query: 435 INYASHRFS 443 + Y + Sbjct: 563 VEYLVKQIK 571 >gi|194435019|ref|ZP_03067260.1| prolyl-tRNA synthetase [Shigella dysenteriae 1012] gi|300902015|ref|ZP_07120042.1| prolyl-tRNA synthetase [Escherichia coli MS 84-1] gi|301305332|ref|ZP_07211428.1| prolyl-tRNA synthetase [Escherichia coli MS 124-1] gi|331651100|ref|ZP_08352128.1| proline--tRNA ligase [Escherichia coli M718] gi|331671699|ref|ZP_08372497.1| proline--tRNA ligase [Escherichia coli TA280] gi|194416755|gb|EDX32883.1| prolyl-tRNA synthetase [Shigella dysenteriae 1012] gi|300405901|gb|EFJ89439.1| prolyl-tRNA synthetase [Escherichia coli MS 84-1] gi|300839437|gb|EFK67197.1| prolyl-tRNA synthetase [Escherichia coli MS 124-1] gi|315254998|gb|EFU34966.1| prolyl-tRNA synthetase [Escherichia coli MS 85-1] gi|331051554|gb|EGI23603.1| proline--tRNA ligase [Escherichia coli M718] gi|331071544|gb|EGI42901.1| proline--tRNA ligase [Escherichia coli TA280] gi|332095137|gb|EGJ00169.1| prolyl-tRNA synthetase [Shigella boydii 5216-82] gi|332097597|gb|EGJ02574.1| prolyl-tRNA synthetase [Shigella dysenteriae 155-74] Length = 572 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDT-SDYAANIE 234 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 66/187 (35%), Positives = 112/187 (59%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 385 ADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 445 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 505 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVE 564 Query: 437 YASHRFS 443 Y + Sbjct: 565 YLVKQIK 571 >gi|194428300|ref|ZP_03060842.1| prolyl-tRNA synthetase [Escherichia coli B171] gi|194413675|gb|EDX29955.1| prolyl-tRNA synthetase [Escherichia coli B171] Length = 572 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDT-SDYAANIE 234 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 383 EVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 443 CYGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++ + + + +E K+R G ++ + ++ Sbjct: 503 QGIEVLLDDRKERPGVMFADMELIGIPHTIVLSDRNLDNDDIEYKYRRNGEKQLIKTGDI 562 Query: 435 INYASHRFS 443 + Y + Sbjct: 563 VEYLVKQIK 571 >gi|30061751|ref|NP_835922.1| prolyl-tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|56479623|ref|NP_706140.2| prolyl-tRNA synthetase [Shigella flexneri 2a str. 301] gi|74310815|ref|YP_309234.1| prolyl-tRNA synthetase [Shigella sonnei Ss046] gi|82542793|ref|YP_406740.1| prolyl-tRNA synthetase [Shigella boydii Sb227] gi|157159661|ref|YP_001456979.1| prolyl-tRNA synthetase [Escherichia coli HS] gi|162139361|ref|YP_687766.2| prolyl-tRNA synthetase [Shigella flexneri 5 str. 8401] gi|170021452|ref|YP_001726406.1| prolyl-tRNA synthetase [Escherichia coli ATCC 8739] gi|187730943|ref|YP_001878997.1| prolyl-tRNA synthetase [Shigella boydii CDC 3083-94] gi|188494186|ref|ZP_03001456.1| prolyl-tRNA synthetase [Escherichia coli 53638] gi|193063143|ref|ZP_03044234.1| prolyl-tRNA synthetase [Escherichia coli E22] gi|193067639|ref|ZP_03048606.1| prolyl-tRNA synthetase [Escherichia coli E110019] gi|194439920|ref|ZP_03071982.1| prolyl-tRNA synthetase [Escherichia coli 101-1] gi|209917387|ref|YP_002291471.1| prolyl-tRNA synthetase [Escherichia coli SE11] gi|218552775|ref|YP_002385688.1| prolyl-tRNA synthetase [Escherichia coli IAI1] gi|253774778|ref|YP_003037609.1| prolyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160314|ref|YP_003043422.1| prolyl-tRNA synthetase [Escherichia coli B str. REL606] gi|256025507|ref|ZP_05439372.1| prolyl-tRNA synthetase [Escherichia sp. 4_1_40B] gi|260842426|ref|YP_003220204.1| prolyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009] gi|260853405|ref|YP_003227296.1| prolyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368] gi|293418080|ref|ZP_06660702.1| prolyl-tRNA synthetase [Escherichia coli B185] gi|297519907|ref|ZP_06938293.1| prolyl-tRNA synthetase [Escherichia coli OP50] gi|300820114|ref|ZP_07100286.1| prolyl-tRNA synthetase [Escherichia coli MS 107-1] gi|300825388|ref|ZP_07105464.1| prolyl-tRNA synthetase [Escherichia coli MS 119-7] gi|300932153|ref|ZP_07147436.1| prolyl-tRNA synthetase [Escherichia coli MS 187-1] gi|300949771|ref|ZP_07163746.1| prolyl-tRNA synthetase [Escherichia coli MS 116-1] gi|300956080|ref|ZP_07168404.1| prolyl-tRNA synthetase [Escherichia coli MS 175-1] gi|301028690|ref|ZP_07191910.1| prolyl-tRNA synthetase [Escherichia coli MS 196-1] gi|301646520|ref|ZP_07246394.1| prolyl-tRNA synthetase [Escherichia coli MS 146-1] gi|307136795|ref|ZP_07496151.1| prolyl-tRNA synthetase [Escherichia coli H736] gi|307311357|ref|ZP_07590999.1| prolyl-tRNA synthetase [Escherichia coli W] gi|331640649|ref|ZP_08341797.1| proline--tRNA ligase [Escherichia coli H736] gi|331666440|ref|ZP_08367321.1| proline--tRNA ligase [Escherichia coli TA271] gi|331680776|ref|ZP_08381435.1| proline--tRNA ligase [Escherichia coli H591] gi|81839318|sp|Q83MC8|SYP_SHIFL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114152250|sp|Q325U6|SYP_SHIBS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114152252|sp|Q3Z5G3|SYP_SHISS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|148887036|sp|Q0T815|SYP_SHIF8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|166980120|sp|A7ZWE2|SYP_ECOHS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|189083498|sp|B1IQE6|SYP_ECOLC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701281|sp|B7M1Z9|SYP_ECO8A RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701284|sp|B6HZR3|SYP_ECOSE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701339|sp|B2U338|SYP_SHIB3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|30039993|gb|AAP15727.1| proline tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|56383174|gb|AAN41847.2| proline tRNA synthetase [Shigella flexneri 2a str. 301] gi|73854292|gb|AAZ86999.1| proline tRNA synthetase [Shigella sonnei Ss046] gi|81244204|gb|ABB64912.1| proline tRNA synthetase [Shigella boydii Sb227] gi|157065341|gb|ABV04596.1| prolyl-tRNA synthetase [Escherichia coli HS] gi|169756380|gb|ACA79079.1| prolyl-tRNA synthetase [Escherichia coli ATCC 8739] gi|187427935|gb|ACD07209.1| prolyl-tRNA synthetase [Shigella boydii CDC 3083-94] gi|188489385|gb|EDU64488.1| prolyl-tRNA synthetase [Escherichia coli 53638] gi|192931051|gb|EDV83654.1| prolyl-tRNA synthetase [Escherichia coli E22] gi|192959051|gb|EDV89487.1| prolyl-tRNA synthetase [Escherichia coli E110019] gi|194421166|gb|EDX37191.1| prolyl-tRNA synthetase [Escherichia coli 101-1] gi|209910646|dbj|BAG75720.1| prolyl-tRNA synthase [Escherichia coli SE11] gi|218359543|emb|CAQ97083.1| prolyl-tRNA synthetase [Escherichia coli IAI1] gi|242376026|emb|CAQ30709.1| prolyl-tRNA synthetase [Escherichia coli BL21(DE3)] gi|253325822|gb|ACT30424.1| prolyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972215|gb|ACT37886.1| prolyl-tRNA synthetase [Escherichia coli B str. REL606] gi|253976424|gb|ACT42094.1| prolyl-tRNA synthetase [Escherichia coli BL21(DE3)] gi|257752054|dbj|BAI23556.1| prolyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368] gi|257757573|dbj|BAI29070.1| prolyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009] gi|281599550|gb|ADA72534.1| putative prolyl-tRNA synthetase [Shigella flexneri 2002017] gi|291430798|gb|EFF03796.1| prolyl-tRNA synthetase [Escherichia coli B185] gi|299878289|gb|EFI86500.1| prolyl-tRNA synthetase [Escherichia coli MS 196-1] gi|300317074|gb|EFJ66858.1| prolyl-tRNA synthetase [Escherichia coli MS 175-1] gi|300450836|gb|EFK14456.1| prolyl-tRNA synthetase [Escherichia coli MS 116-1] gi|300460090|gb|EFK23583.1| prolyl-tRNA synthetase [Escherichia coli MS 187-1] gi|300522148|gb|EFK43217.1| prolyl-tRNA synthetase [Escherichia coli MS 119-7] gi|300527328|gb|EFK48390.1| prolyl-tRNA synthetase [Escherichia coli MS 107-1] gi|301075273|gb|EFK90079.1| prolyl-tRNA synthetase [Escherichia coli MS 146-1] gi|306908336|gb|EFN38834.1| prolyl-tRNA synthetase [Escherichia coli W] gi|315059413|gb|ADT73740.1| prolyl-tRNA synthetase [Escherichia coli W] gi|315616320|gb|EFU96938.1| prolyl-tRNA synthetase [Escherichia coli 3431] gi|320173324|gb|EFW48527.1| prolyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112] gi|320186617|gb|EFW61342.1| prolyl-tRNA synthetase [Shigella flexneri CDC 796-83] gi|320200278|gb|EFW74864.1| prolyl-tRNA synthetase [Escherichia coli EC4100B] gi|323157966|gb|EFZ44068.1| prolyl-tRNA synthetase [Escherichia coli EPECa14] gi|323165899|gb|EFZ51681.1| prolyl-tRNA synthetase [Shigella sonnei 53G] gi|323170987|gb|EFZ56636.1| prolyl-tRNA synthetase [Escherichia coli LT-68] gi|323380028|gb|ADX52296.1| prolyl-tRNA synthetase [Escherichia coli KO11] gi|323939929|gb|EGB36127.1| prolyl-tRNA synthetase [Escherichia coli E482] gi|323945673|gb|EGB41722.1| prolyl-tRNA synthetase [Escherichia coli H120] gi|323959956|gb|EGB55603.1| prolyl-tRNA synthetase [Escherichia coli H489] gi|323970674|gb|EGB65930.1| prolyl-tRNA synthetase [Escherichia coli TA007] gi|324019415|gb|EGB88634.1| prolyl-tRNA synthetase [Escherichia coli MS 117-3] gi|324118316|gb|EGC12211.1| prolyl-tRNA synthetase [Escherichia coli E1167] gi|331040395|gb|EGI12602.1| proline--tRNA ligase [Escherichia coli H736] gi|331066651|gb|EGI38528.1| proline--tRNA ligase [Escherichia coli TA271] gi|331072239|gb|EGI43575.1| proline--tRNA ligase [Escherichia coli H591] gi|332762067|gb|EGJ92338.1| prolyl-tRNA synthetase [Shigella flexneri 2747-71] gi|332765044|gb|EGJ95272.1| prolyl-tRNA synthetase [Shigella flexneri K-671] gi|332768698|gb|EGJ98878.1| prolyl-tRNA synthetase [Shigella flexneri 2930-71] gi|333009265|gb|EGK28721.1| prolyl-tRNA synthetase [Shigella flexneri K-218] gi|333010690|gb|EGK30123.1| prolyl-tRNA synthetase [Shigella flexneri VA-6] gi|333011036|gb|EGK30455.1| prolyl-tRNA synthetase [Shigella flexneri K-272] gi|333021831|gb|EGK41080.1| prolyl-tRNA synthetase [Shigella flexneri K-227] gi|333022223|gb|EGK41462.1| prolyl-tRNA synthetase [Shigella flexneri K-304] Length = 572 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDT-SDYAANIE 234 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 112/189 (59%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 383 EVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 443 CYGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++ Sbjct: 503 QGIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDI 562 Query: 435 INYASHRFS 443 + Y + Sbjct: 563 VEYLVKQIK 571 >gi|157147374|ref|YP_001454693.1| prolyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895] gi|166980115|sp|A8AL94|SYP_CITK8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157084579|gb|ABV14257.1| hypothetical protein CKO_03172 [Citrobacter koseri ATCC BAA-895] Length = 572 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG+ SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDVIFSDS-SDYAANIE 234 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 383 EVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y L Sbjct: 443 CYGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYGELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + E+ Sbjct: 503 QGIEVLMDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGEI 562 Query: 435 INYASHRFS 443 +++ Sbjct: 563 VDFLVKAIK 571 >gi|116515338|ref|YP_816901.1| threonyl-tRNA synthetase [Streptococcus pneumoniae D39] gi|161410743|ref|NP_359065.2| threonyl-tRNA synthetase [Streptococcus pneumoniae R6] gi|73621971|sp|Q8DNX8|SYT_STRR6 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|122278253|sp|Q04JD7|SYT_STRP2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|116075914|gb|ABJ53634.1| threonyl-tRNA synthetase [Streptococcus pneumoniae D39] Length = 647 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 156/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I ++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVNKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 287 VSGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYEDFNLTDYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QIKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG+DH M G+ + I + + + I ++ Sbjct: 503 YIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +S++ + +N Sbjct: 619 GQKETQTVSVDNFVQAILADIANK 642 >gi|9955215|pdb|1EVK|A Chain A, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase With The Ligand Threonine gi|9955216|pdb|1EVK|B Chain B, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase With The Ligand Threonine gi|9955217|pdb|1EVL|A Chain A, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase With A Threonyl Adenylate Analog gi|9955218|pdb|1EVL|B Chain B, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase With A Threonyl Adenylate Analog gi|9955219|pdb|1EVL|C Chain C, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase With A Threonyl Adenylate Analog gi|9955220|pdb|1EVL|D Chain D, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase With A Threonyl Adenylate Analog gi|12084202|pdb|1FYF|A Chain A, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase Complexed With A Seryl Adenylate Analog gi|12084203|pdb|1FYF|B Chain B, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase Complexed With A Seryl Adenylate Analog gi|20664135|pdb|1KOG|A Chain A, Crystal Structure Of E. Coli Threonyl-Trna Synthetase Interacting With The Essential Domain Of Its Mrna Operator gi|20664136|pdb|1KOG|B Chain B, Crystal Structure Of E. Coli Threonyl-Trna Synthetase Interacting With The Essential Domain Of Its Mrna Operator gi|20664137|pdb|1KOG|C Chain C, Crystal Structure Of E. Coli Threonyl-Trna Synthetase Interacting With The Essential Domain Of Its Mrna Operator gi|20664138|pdb|1KOG|D Chain D, Crystal Structure Of E. Coli Threonyl-Trna Synthetase Interacting With The Essential Domain Of Its Mrna Operator gi|20664139|pdb|1KOG|E Chain E, Crystal Structure Of E. Coli Threonyl-Trna Synthetase Interacting With The Essential Domain Of Its Mrna Operator gi|20664140|pdb|1KOG|F Chain F, Crystal Structure Of E. Coli Threonyl-Trna Synthetase Interacting With The Essential Domain Of Its Mrna Operator gi|20664141|pdb|1KOG|G Chain G, Crystal Structure Of E. Coli Threonyl-Trna Synthetase Interacting With The Essential Domain Of Its Mrna Operator gi|20664142|pdb|1KOG|H Chain H, Crystal Structure Of E. Coli Threonyl-Trna Synthetase Interacting With The Essential Domain Of Its Mrna Operator Length = 401 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 78/432 (18%), Positives = 140/432 (32%), Gaps = 40/432 (9%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD +L L + + + G+ W G + +R + E+ P + Sbjct: 1 RDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMM 58 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 LW ++G +D+Y M ++ P + IF +KSYR+LP + Sbjct: 59 DRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEF 117 Query: 136 QLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIP 194 R+E G+MR R F DA+ F + N ++ G + I Sbjct: 118 GSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDE-VNGCIRLVYDMYSTFGFEKIV 176 Query: 195 MRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTA 254 ++ + P S E D ++ A Sbjct: 177 VKLSTRPEKRIGSDE-----------------MWDRAEADLAVALEENNIPFEYQLGEGA 219 Query: 255 PYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH-YVQ 313 Y + L+D L + ++ F ++ S A++ G D + V Sbjct: 220 FYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPSRLS----ASYVGEDNERKVPVM 268 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 + +G+M ++ G W V +++ + ++ +LS Sbjct: 269 IHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT------DSQSEYVNELTQKLS 322 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G V D E+IG + L P ++ G K V KV ++ R M + E Sbjct: 323 NAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNE 382 Query: 434 VINYASHRFSNN 445 VI + Sbjct: 383 VIEKLQQEIRSR 394 >gi|315171869|gb|EFU15886.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1342] Length = 660 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 161/443 (36%), Gaps = 34/443 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L M+ + G+ WLP G + I +++ Sbjct: 246 FIKMREEAKERDHRKLGKELDLF--MVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISL 303 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D M + P + ++++ I Sbjct: 304 GYQHVYTPIMADVELYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIH 363 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + + + Sbjct: 364 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA 423 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ + R D T + D M + D++ Sbjct: 424 VYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKAAMDEL 469 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ F ++ T+ Sbjct: 470 ELDYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTY 518 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++ + + + G + + + + +P +AP + ++I + + Sbjct: 519 VGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV--EAHS 575 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +I RL G V DD E++G + + P Q++VG K + D+ V ++ Sbjct: 576 EYAYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKVPYQLVVGDKEMEDATVNVRRYG 635 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L I+ + N Sbjct: 636 SKETSVEDLSIFIDSMAAEVHNY 658 >gi|298694953|gb|ADI98175.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus ED133] gi|323440773|gb|EGA98482.1| threonyl-tRNA synthetase [Staphylococcus aureus O11] gi|323442928|gb|EGB00551.1| threonyl-tRNA synthetase [Staphylococcus aureus O46] Length = 645 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 76/445 (17%), Positives = 161/445 (36%), Gaps = 33/445 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD +L L T G+ WLP G + I +++ Sbjct: 229 KAHLQMLEERKERDHRKIGKELELFTN-SQLVGAGLPLWLPNGATIRREIERYIVDKEVS 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHI 122 G + P L + DL+ SG +D Y ++M ++ M+ P + I+ + Sbjct: 288 MGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPMNCPHHMMIYANKP 347 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ R E ++ + + + P+ K + ++ + Sbjct: 348 HSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMII 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDD 241 ++ G + R D + + + D + D+ Sbjct: 408 DVYKDFGFEDYSFRLS--------------YRDPEDKEKYFDDDDMWNKAENMLKEAADE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y DV ++ ++ + + +S ++ F ++ T Sbjct: 454 LGLSYEEAIGEAAFYGPKLDV---QVKTAMGKEETLSTAQLD----FLLPERFD----LT 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + G DG+ H + G + + + + +P +AP ++ +I + + Sbjct: 503 YIGQDGEHHRPVVIHR--GVVSTMERFVAFLTEETKGAFPTWLAPKQVQIIPVNV--DLH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ L G V D+ E++G + A + P Q++VG K V +++V ++ Sbjct: 559 YDYARQLQDELKSQGVRVSIDERNEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRQY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + +E + +E I + Sbjct: 619 GSQDQETVEKDEFIWNLVDEIRLKK 643 >gi|259047194|ref|ZP_05737595.1| threonine--tRNA ligase [Granulicatella adiacens ATCC 49175] gi|259036244|gb|EEW37499.1| threonine--tRNA ligase [Granulicatella adiacens ATCC 49175] Length = 647 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 76/446 (17%), Positives = 166/446 (37%), Gaps = 33/446 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 FL + +E RD +L L MI + G+ WLP G + I +++ Sbjct: 229 FLKMREEAKERDHRKLGKELDLF--MISQEVGSGLPFWLPKGATIRRTIERYIVDKEISL 286 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHIK 123 G + P + L+ SG + Y ++M D D ++ P + ++++HI Sbjct: 287 GYQHVYTPVMADVGLYKTSGHWAHYQEDMFPPMDMGDGELLVLRPMNCPHHMMVYKNHIH 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + ++ Sbjct: 347 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRILDLIRE 406 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ +K R + D E + D++ Sbjct: 407 VYSDFNVKDYRFRLS-----YRDPEDKHKYFDDDEM--------WNKAETMLKEAMDEMG 453 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 A Y D+ + ++ + +S ++ F ++ T+ Sbjct: 454 LEYFEAIGEAAFYGPKLDI---QFRTAMGLEETMSTIQLD----FLLPERFD----LTYV 502 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 G DG + + + + G + + + +P +AP + ++I + + D Sbjct: 503 GEDGDNTHRPVVIHR-GVVSTAERFVAYLIEEYKGAFPTWLAPVQATIIPVSV--EHHYD 559 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 A ++ +++++G V DD E++G + + P Q+++G K V + V ++ + Sbjct: 560 AARELKEKMARLGMRVELDDRNEKMGYKIRASQTQKIPYQLVIGDKEVEEGTVTVRRYGS 619 Query: 424 GIREDMSLEEVINYASHRFSN-NRPV 448 + MS+E + Y +N +RP+ Sbjct: 620 KETKSMSIEAYLEYVQREIANFSRPL 645 >gi|237729500|ref|ZP_04559981.1| prolyl-tRNA synthetase [Citrobacter sp. 30_2] gi|226909229|gb|EEH95147.1| prolyl-tRNA synthetase [Citrobacter sp. 30_2] Length = 590 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 167/235 (71%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 19 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 78 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D++ + GPTHEEV+TD+ R+ Sbjct: 79 MNNAGAIEVLMPVVQPSELWEESGRWEQYGPELLRIADRGDRSFVLGPTHEEVITDLIRN 138 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 139 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 198 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 199 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDS-SDYAANIE 252 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 69/189 (36%), Positives = 110/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ K + RGIEVGHIF GTKYS M A +G DG++ + MG Sbjct: 401 EVADIRNVVAGDPSPDGKGTLMIKRGIEVGHIFQLGTKYSEAMKAAVQGEDGRNQTLTMG 460 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSK 374 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+YA L Sbjct: 461 CYGIGVTRVVAAAIEQNFDDRGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRA 520 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R G +E + ++ Sbjct: 521 QGIEVLMDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKELIKTGDI 580 Query: 435 INYASHRFS 443 +++ Sbjct: 581 VDFLVKAIK 589 >gi|322419731|ref|YP_004198954.1| threonyl-tRNA synthetase [Geobacter sp. M18] gi|320126118|gb|ADW13678.1| threonyl-tRNA synthetase [Geobacter sp. M18] Length = 636 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 84/443 (18%), Positives = 151/443 (34%), Gaps = 40/443 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + R+E + G Sbjct: 232 YLARIEEAKKRDHRKLGKELDLFS-FNDEVGAGLVIWHPKGAMLRTILEDFERKEHLKRG 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +LW SG Y++Y + M +++ P + I+RS ++SY Sbjct: 291 YDIVVGPQILKTELWQRSGHYENYRENM-YFTTVDEQGYGVKPMNCLAHMMIYRSQLRSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++++ R E G++R R F DA+ TPE + + Sbjct: 350 RDLPLRYFELGTVHRHERAGVLHGLLRVRGFTQDDAHILC-TPEQLDAEIKGVIQFVTEV 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G EF + T + S D + + D Sbjct: 409 MGIFG------------------FEFEMELSTRPEKSIGSDDAWELATSALLNALKDSGR 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ KL D+L + + + F ++ T+ Sbjct: 451 PFEINEGDGAFYGPKIDI---KLRDALDRRWQCATIQCD----FTLPERFD----LTYVD 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ + +GA+ V+ G W V +++ Sbjct: 500 ADGEKKRPVMVHRVILGAIERFIGVLIEHFAGNFPTWLAPVQATIVTVT------DNQIP 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L G V D E++G + A L P ++VG K V + ++R Sbjct: 554 YAQAAFDTLRAAGVRVQKDFRNEKLGFKIREAQLQKIPYMLVVGDKEVEGGLLAPRYRDG 613 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 + M+ E+ + + + Sbjct: 614 KNLDAMTPEQFVAFIEKEVKTYK 636 >gi|224476774|ref|YP_002634380.1| threonyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus TM300] gi|254783537|sp|B9DNC9|SYT_STACT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|222421381|emb|CAL28195.1| threonyl-tRNA synthetase 1 [Staphylococcus carnosus subsp. carnosus TM300] Length = 647 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 72/446 (16%), Positives = 156/446 (34%), Gaps = 33/446 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD +L L G+ WLP G + I +++ Sbjct: 229 KAHLKMLEERKERDHRKIGKELDLFMN-SQLVGAGLPLWLPNGATIRREIERYIVDKEVA 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHI 122 G + P + + +L+ SG +D Y +M ++ M+ P + I+++ Sbjct: 288 LGYDHVYTPVMANVELYKTSGHWDHYQDDMFPPMKLDETEEMVLRPMNCPHHMMIYKNKP 347 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ R E ++ + + + P+ K + ++ L Sbjct: 348 HSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVELIL 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDD 241 ++ G ++ R D + + + D + D+ Sbjct: 408 DVYEDFGFENYSFRLS--------------YRDPEDKEKYFDDDEMWERAESMLKEAVDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y DV ++ ++ + + +S ++ F ++ Sbjct: 454 MGLPYEEAIGEAAFYGPKLDV---QVKTAMGKEETLSTAQLD----FLLPERFD----LA 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + G DG++H + G+ + + + +I +N+ H Sbjct: 503 YIGKDGEEHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPKQVEIIPVNVDLH---- 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D +I L G V DD E++G + A + P Q+++G K + +++V ++ Sbjct: 559 YDYARQIQDELKSQGVRVEIDDRNEKMGYKIREAQMHKIPYQLVIGDKEIENNEVNVRKY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNNRP 447 + +E + +E I + Sbjct: 619 GSKDQETVEKDEFIWNLVDEIRLKKQ 644 >gi|197119263|ref|YP_002139690.1| prolyl-tRNA synthetase [Geobacter bemidjiensis Bem] gi|226701292|sp|B5EIT9|SYP_GEOBB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|197088623|gb|ACH39894.1| prolyl-tRNA synthetase [Geobacter bemidjiensis Bem] Length = 573 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 128/251 (50%), Positives = 170/251 (67%), Gaps = 1/251 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+P ++E P DAE+ SHKLMLR GMI + + GIY++LP G +++ V AI+REE Sbjct: 1 MRYSQYFIPTVKETPSDAEVISHKLMLRAGMIRKLAAGIYNYLPFGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YGKE+LR DR D GPTHEEV+TD+ R Sbjct: 61 MNRAGAIELLMPAVQPAELWKESGRWEFYGKELLRFNDRKDAEFCMGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ G+ SY KM+ + Sbjct: 121 EVRSYRQLPINLYQIQGKFRDEIRPRFGLMRGREFIMKDAYSFDVNEAGADVSYEKMYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK + A++G IGG SHEF+VLAD+GE + ++ E + Sbjct: 181 YRRIFERCGLKFRAVEADTGTIGGSYSHEFMVLADSGEDAIVSCSAC-EYAANMEKAETR 239 Query: 241 DIISLNSIVEQ 251 + + Sbjct: 240 KGEGIEHADPR 250 Score = 189 bits (481), Expect = 7e-46, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 111/196 (56%), Gaps = 3/196 (1%) Query: 256 YAATSDVHNEKLFDSLPEN---KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 + D+ N + D+ P K RGIEVGH+F GTKYS + ATF ADGK+ + Sbjct: 378 VSGFVDIRNVVIGDACPRCDSGKLEIWRGIEVGHVFKLGTKYSKALKATFLDADGKEQII 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R VAA IE +HD GII+P +APF+ + ++ A + + A E IY L Sbjct: 438 FMGCYGIGVGRTVAACIEQNHDENGIIFPIPIAPFQCIISSLSAKEDEVKAASESIYQEL 497 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 + G +V DD E+ G +F ADL+G PL+++VG+K +++ KVE+K R +G E + + Sbjct: 498 LEAGIEVLLDDRDERPGFKFKDADLIGIPLRIVVGAKALAEGKVELKERRSGEVEVLPIA 557 Query: 433 EVINYASHRFSNNRPV 448 E I V Sbjct: 558 EAIAKVKAAVKEALQV 573 >gi|30022651|ref|NP_834282.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|29898209|gb|AAP11483.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 14579] Length = 646 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 79/433 (18%), Positives = 169/433 (39%), Gaps = 30/433 (6%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L T + +G+ WLP G + I +++ G Sbjct: 238 LRMLEEAKERDHRKLGKELKLFTN-SQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGY 296 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG ++ Y M + +++ ++ P + ++++ I SYR Sbjct: 297 DHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYR 356 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K ++ L ++ Sbjct: 357 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYK 416 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 GL++ R + ADT + + + + D++ Sbjct: 417 DFGLENYSFRLS-----------YRDPADTK--KYYADDEMWEKAQGMLKEAMDEMGLDY 463 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y DV ++ +L +++ +S ++ F ++ ++ G D Sbjct: 464 YEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERF----ELSYVGED 512 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 GK H + G + + + + +P +AP ++ +I + QV D + Sbjct: 513 GKQHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVQVIPVSP--QVHLDYAK 568 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+ L + G V D E+IG + A + P ++VG V+++ V ++ Sbjct: 569 KVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKS 628 Query: 427 EDMSLEEVINYAS 439 E ++L+ ++ Sbjct: 629 ETIALDAFVDMIK 641 >gi|322383766|ref|ZP_08057517.1| threonyl-tRNA synthetase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321151978|gb|EFX44921.1| threonyl-tRNA synthetase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 649 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 69/436 (15%), Positives = 156/436 (35%), Gaps = 34/436 (7%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD L + + + +G+ WLP G + I + + + G + P Sbjct: 240 AKKRDHRKLGKDLKIFS-FSREVGQGLPLWLPNGATIRRTLERYIVDLEEKLGYQHVYTP 298 Query: 73 TLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 L + DL+ SG ++ Y ++M +++ ++ P + ++++ + SYR+LP Sbjct: 299 VLANVDLYKTSGHWEHYREDMFPPMQLDNEELVLRPMNCPHHMMVYKNELHSYRDLPIRI 358 Query: 133 YQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 ++ R E+ G+ R R + DA+ F P+ K + ++ +++ G+ Sbjct: 359 AELGTMHRYEMSGALTGLHRVRAMTLNDAHIFCR-PDQIKEEFARVITLIRQVYADFGIT 417 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSENTDFDDIISLNSIVE 250 R D +T + + + + +++ E Sbjct: 418 DYRFRLS--------------YRDPQDTDKYFPNDEMWEMSQRMLKEVVEELRLPYYEAE 463 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y DV ++ +L + + +S ++ F ++ + G DG+ H Sbjct: 464 GEAAFYGPKLDV---QIKTALKKEETLSTAQLD----FLLPERF----ELEYVGEDGQKH 512 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + G + + + + P + P + ++ + D +++ Sbjct: 513 RPVVIHR--GIVSTMERMTAFLLENFAGALPTWLCPVQAKILPV---SSAFNDYAKEMED 567 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 RL + G V D E++G + + L P ++VG ++ R G S Sbjct: 568 RLKQAGIRVAADLRNEKLGYKIRESQLEKVPFMLVVGENEKQSGSFSVRRRGEGDLGVHS 627 Query: 431 LEEVINYASHRFSNNR 446 + +I + Sbjct: 628 ADALIQMIREEIDTKK 643 >gi|323490461|ref|ZP_08095668.1| threonyl-tRNA synthetase [Planococcus donghaensis MPA1U2] gi|323395865|gb|EGA88704.1| threonyl-tRNA synthetase [Planococcus donghaensis MPA1U2] Length = 642 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 76/441 (17%), Positives = 163/441 (36%), Gaps = 32/441 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD +L L + +G+ WLP G + I +++ R Sbjct: 232 KAHLEMLEEAKERDHRKIGKELNLFMN-SQKVGQGLPMWLPKGATIRRIIERYIVDKEER 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + S +L+ SG +D Y ++M + +++ ++ P + IF+ I Sbjct: 291 LGYDHVYTPVMGSVELYKTSGHWDHYQEDMFPVMKMDNEELVLRPMNCPHHMMIFKQGIH 350 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR +P ++ L R E+ ++ + + + P+ K + ++ + Sbjct: 351 SYRQMPVRIAELGLMHRYEMSGALSGLQRVRGMTLNDAHLFVRPDQIKEEFKRVVNLIVE 410 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ + R D + + + D M + D++ Sbjct: 411 VYKDFNINDYSFRLS--------------YRDPEDKEKYFDDDAMWNRAQAMLKEAMDEL 456 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 VE A Y DV ++ +L + + +S ++ F ++ ++ Sbjct: 457 DVDYIEVEGEAAFYGPKVDV---QVKTALGKEETLSTVQLD----FLLPERFD----LSY 505 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DGK H + G + + + + +P +AP ++ LI + Sbjct: 506 IGEDGKQHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVELIPVSL--DAHS 561 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++ +L V D+ E++G + A + P +++G K + D V ++ Sbjct: 562 AYTKELQEKLQSHKIRVDIDERDEKLGYKIREAQMQKVPYMLVLGDKELEDGSVNVRKYG 621 Query: 423 TGIREDMSLEEVINYASHRFS 443 E M E+ + Sbjct: 622 EQKSESMPFEDFVKLVQSELR 642 >gi|258404181|ref|YP_003196923.1| threonyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692] gi|257796408|gb|ACV67345.1| threonyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692] Length = 649 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 80/439 (18%), Positives = 154/439 (35%), Gaps = 40/439 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 Y + + RD +L L + + G+ W P G + R+E Sbjct: 227 LKNYLQQLEEAKKRDHRKLGAQLDLFS-FSEEAGPGMPLWHPKGALIRTILEDFSRKEHL 285 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 R G + PTL +LW SG YD+Y + M + +D+A P + I+ + I Sbjct: 286 RRGYQLVQGPTLLRQELWQRSGHYDNYRENM-YFTEIDDQAYGIKPMNCLAHMLIYNTKI 344 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP ++++ R E G++R R+F DA+ + + Sbjct: 345 RSYRDLPIRYFELGTVHRHEKSGVLHGLLRVRQFTQDDAHILCRPDQLQDEISKIVRFV- 403 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + G ++ V T + S D D + D+ Sbjct: 404 ------------------QDVLGLFGFDYEVEISTRPEKSIGSDDAWDRATDALTKALDE 445 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + I A Y D+ KL D+L + + + F ++ Sbjct: 446 LGVEYGICAGDGAFYGPKIDM---KLKDALGRKWQCTTIQCD----FTLPERFD----LV 494 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G DG+ H + +GA+ V+ + G W +++ Sbjct: 495 YVGQDGQRHRPVMLHRAMLGAIERFLGVLLEHYAGALPTWLMPEQARVLNIT------DD 548 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + ++ +L G D E++G + A + P ++VG + V+ S ++ Sbjct: 549 HAEYAQQCVDQLRAAGIRAEADLRNEKLGYKVREAQMEKIPYVLVVGEQEVATSGANLRL 608 Query: 421 RLTGIREDMSLEEVINYAS 439 R + ++++I+ Sbjct: 609 RGGKNIGVLPVDDIIDRIR 627 >gi|294779531|ref|ZP_06744926.1| threonine--tRNA ligase [Enterococcus faecalis PC1.1] gi|300861074|ref|ZP_07107161.1| threonine--tRNA ligase [Enterococcus faecalis TUSoD Ef11] gi|307268336|ref|ZP_07549717.1| threonyl-tRNA synthetase [Enterococcus faecalis TX4248] gi|307276154|ref|ZP_07557285.1| threonyl-tRNA synthetase [Enterococcus faecalis TX2134] gi|294453410|gb|EFG21817.1| threonine--tRNA ligase [Enterococcus faecalis PC1.1] gi|300850113|gb|EFK77863.1| threonine--tRNA ligase [Enterococcus faecalis TUSoD Ef11] gi|306507148|gb|EFM76287.1| threonyl-tRNA synthetase [Enterococcus faecalis TX2134] gi|306515362|gb|EFM83896.1| threonyl-tRNA synthetase [Enterococcus faecalis TX4248] gi|315036305|gb|EFT48237.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0027] Length = 660 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 161/443 (36%), Gaps = 34/443 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L M+ + G+ WLP G + I +++ Sbjct: 246 FIKMREEAKERDHRKLGKELDLF--MVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISL 303 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D M + P + ++++ I Sbjct: 304 GYQHVYTPIMADVELYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIH 363 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + + + Sbjct: 364 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA 423 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ + R D T + D M + D++ Sbjct: 424 VYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKAAMDEL 469 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ F ++ T+ Sbjct: 470 ELDYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTY 518 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++ + + + G + + + + +P +AP + ++I + + Sbjct: 519 VGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV--EAHS 575 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +I RL G V DD E++G + + P Q++VG K + D+ V ++ Sbjct: 576 EYAYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKVPYQLVVGDKEMEDATVNVRRYG 635 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L I+ + N Sbjct: 636 SKETSVEDLSIFIDSMAAEVHNY 658 >gi|288940948|ref|YP_003443188.1| prolyl-tRNA synthetase [Allochromatium vinosum DSM 180] gi|288896320|gb|ADC62156.1| prolyl-tRNA synthetase [Allochromatium vinosum DSM 180] Length = 572 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 122/235 (51%), Positives = 164/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L ++E P DAEIASH+LMLR G+I + + G+Y+WLPLG + L V I+REE Sbjct: 1 MRTSEFPLQTIKETPADAEIASHRLMLRAGLIRKLAAGLYTWLPLGLRVLRRVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+S+P +Q A+LW ESGR++ YG E+LR DR+ + +GPTHEE++T++ R+ Sbjct: 61 MDRAGALEVSMPAVQPAELWQESGRWEQYGPELLRFKDRHQREFCFGPTHEEIITELARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF L +Y +M + Sbjct: 121 ELKSYKQLPINFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLDDASLAETYQRMHEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R GL P+ A++G IGG SHEF VLA +GE + D+ E Sbjct: 181 YCRIFTRCGLDFRPVSADTGSIGGSASHEFHVLASSGEDAIAF-STGSDYAANVE 234 Score = 181 bits (458), Expect = 3e-43, Method: Composition-based stats. Identities = 77/192 (40%), Positives = 106/192 (55%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ + ARGIEVGHIF G KYS M AT G DGK + Sbjct: 380 PLPEVADLRNVVEGDPSPDGQGTLTIARGIEVGHIFQLGRKYSEAMKATVLGEDGKATVM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG RVVAA IE HD +GI WP +APF+++L+ +K R+A EK+YA Sbjct: 440 TMGCYGIGVSRVVAAAIEQHHDERGICWPAPIAPFEVALLPMKLGKSYRVREATEKLYAE 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD + G FA +L+G P +++VG K + D +VE K R + + + Sbjct: 500 LQAAGIDVLLDDRDARPGFMFADMELIGIPHRIVVGDKGLDDGQVEYKGRADAEMQLIPI 559 Query: 432 EEVINYASHRFS 443 + ++ + R Sbjct: 560 DTIVEFVRERLR 571 >gi|209523462|ref|ZP_03272017.1| threonyl-tRNA synthetase [Arthrospira maxima CS-328] gi|209496204|gb|EDZ96504.1| threonyl-tRNA synthetase [Arthrospira maxima CS-328] Length = 622 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 75/446 (16%), Positives = 158/446 (35%), Gaps = 39/446 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y+ +E RD +L L + I + G+ W P G + + R+ Sbjct: 211 EYYQQQKEEAKKRDHRKLGQELDLFS--IQEDAGGGLVFWHPKGSRMRLLIEDYWRQAHL 268 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G + P + + +LW SG YD Y + M + +++ P + ++SH+ Sbjct: 269 QDGYELLYSPHIANLELWKTSGHYDFYRENMFDQIEIENQSYQLKPMNCPFHVLTYQSHL 328 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR LP + ++ +R E G+MR R F DA+ F L + + + Sbjct: 329 HSYRELPIRWAELGTVYRYERSGVLHGLMRVRGFTQDDAHIFCLPEQVADE-ILGVLNLT 387 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +I G + + P + + + Sbjct: 388 EKILSDFGFSKYEVNLSTRPSKS-----------------VGNDAVWQLATDALIAALNT 430 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 E A Y D+ K+ D++ + S ++ F ++++ A Sbjct: 431 KGWDYVTDEGGGAFYGPKIDI---KIQDAIGRLWQCSTIQVD----FNLPERFNMEYVAA 483 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + + + G++ ++ ++ G +W + + A Sbjct: 484 ---DGSRQRPIMIHRAIFGSLERFFGILIENYAGDFPLW------LAPVQVRVLAVSDRF 534 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 RD + I L + D+ GE++G Q ++L P+ V++G + + + + ++ R Sbjct: 535 RDYAQSIAQSLRQQNIRAEVDNTGERLGKQIRNSELEKIPVTVVIGQRELDNQSLSVRTR 594 Query: 422 LTGIREDMSLEEVINYASHRFSNNRP 447 +G M+L ++ + P Sbjct: 595 SSGDLGTMTLPQLTEEILKAIAEKSP 620 >gi|284008500|emb|CBA75007.1| prolyl-tRNA synthetase [Arsenophonus nasoniae] Length = 571 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 124/235 (52%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SHKLMLR GMI + + G+Y WLP G + L V IIREE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHKLMLRAGMIRKLASGLYDWLPTGVRVLRKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNRAGAIEISMPIVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ + Sbjct: 121 EVTSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTDQDSLQQTYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R+G ++A++G IGG+ SHEF VLAD+GE + D+ E Sbjct: 181 YSAIFTRIGFNFRAVQADTGSIGGNASHEFQVLADSGEDNIVF-STASDYAANIE 234 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 71/186 (38%), Positives = 110/186 (59%), Gaps = 3/186 (1%) Query: 261 DVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P+ K RGIEVGHIF GTKYS M A+ + DG + V MG YG Sbjct: 386 DLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKASVQNEDGHNQTVTMGCYG 445 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGC 377 IG R+VAA IE SHD KGIIWPD++APF+++++ + H ++ E++Y L G Sbjct: 446 IGVTRIVAAAIEQSHDDKGIIWPDAIAPFQVAILPMNMHKSYRVKEVAERLYRDLQAKGI 505 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 DV DD E+ G FA +L+G P +++G + + +++VE K R +E +++ ++++ Sbjct: 506 DVLLDDRKERPGVMFADMELIGIPHTIVIGDRNLDNNQVEYKQRRNNEKEYINIAGIVDF 565 Query: 438 ASHRFS 443 + + Sbjct: 566 LHTKLN 571 >gi|227519418|ref|ZP_03949467.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0104] gi|307280591|ref|ZP_07561639.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0860] gi|227073125|gb|EEI11088.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0104] gi|306503957|gb|EFM73174.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0860] gi|315145737|gb|EFT89753.1| threonyl-tRNA synthetase [Enterococcus faecalis TX2141] gi|315151718|gb|EFT95734.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0012] gi|315173904|gb|EFU17921.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1346] Length = 660 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 161/443 (36%), Gaps = 34/443 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L M+ + G+ WLP G + I +++ Sbjct: 246 FIKMREEAKERDHRKLGKELDLF--MVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISL 303 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D M + P + ++++ I Sbjct: 304 GYQHVYTPIMADVELYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIH 363 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + + + Sbjct: 364 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA 423 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ + R D T + D M + D++ Sbjct: 424 VYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKAAMDEL 469 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ F ++ T+ Sbjct: 470 ELDYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTY 518 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++ + + + G + + + + +P +AP + ++I + + Sbjct: 519 VGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV--EAHS 575 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +I RL G V DD E++G + + P Q++VG K + D+ V ++ Sbjct: 576 EYAYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKVPYQLVVGDKEMEDATVNVRRYG 635 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L I+ + N Sbjct: 636 SKETSVEDLSIFIDSMAAEVHNY 658 >gi|289830168|ref|ZP_06547590.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 282 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S D+ E Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSD-VSDYAANIE 234 >gi|332704074|ref|ZP_08424162.1| Prolyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay] gi|332554223|gb|EGJ51267.1| Prolyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay] Length = 576 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 124/254 (48%), Positives = 170/254 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+++LP L+E P DAE+ SHKL+LR G+I Q + GIY++LP+G +AL+ V I+R+E Sbjct: 1 MRLSRFYLPTLKEVPADAEVVSHKLLLRAGLIRQLTSGIYTYLPMGLRALNKVADIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P +Q A+LW E+GR++ YGKE+LR DR D GPTHEEV+T++ R Sbjct: 61 MDRAGAQEILMPMVQPAELWKETGRWEFYGKELLRFKDRKDSDYCLGPTHEEVVTNLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD EG+ SY M+ + Sbjct: 121 EVRSYRQLPLNLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFDRDEEGANKSYWSMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF RLGLK + A+SG IGG SHEF+VLA TGE + ++ + Sbjct: 181 YAQIFRRLGLKFKAVEADSGAIGGSFSHEFMVLAATGEDTIATCQECEWAANLEKAAVIC 240 Query: 241 DIISLNSIVEQWTA 254 ++ +T Sbjct: 241 KVLPCTDNCSPFTV 254 Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 69/186 (37%), Positives = 103/186 (55%), Gaps = 2/186 (1%) Query: 256 YAATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 A +D+ D P + RGIEVGH+F G KYS M ATF +GKD + Sbjct: 376 VEAYADLRTITHEDVCPRCGKGVSLTRGIEVGHVFKLGYKYSKAMHATFLDENGKDQTMV 435 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R++A+ IE +HD GII+P S+AP++ +LI++ ++Y L Sbjct: 436 MGCYGIGVSRIIASAIEQNHDDGGIIFPPSIAPYEAALISLGKSGDAVNAKAAELYESLR 495 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G +V +DD E+ G +F ADL+G+P+Q+++G K + VE K R TG + ++ LE+ Sbjct: 496 AEGIEVLFDDREERPGVKFKDADLVGYPMQIVLGGKGLERGVVEAKDRRTGEKAELPLED 555 Query: 434 VINYAS 439 Sbjct: 556 FTKAFK 561 >gi|15837338|ref|NP_298026.1| threonyl-tRNA synthetase [Xylella fastidiosa 9a5c] gi|22654146|sp|Q9PFE2|SYT_XYLFA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|9105624|gb|AAF83546.1|AE003915_11 threonyl-tRNA synthetase [Xylella fastidiosa 9a5c] Length = 635 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 72/435 (16%), Positives = 138/435 (31%), Gaps = 40/435 (9%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + RD L + + G+ W P G + IR +G E Sbjct: 236 RLQDAEKRDHRKIGKVQDLF--HLQEEGPGLVFWHPKGWVIWQTIENYIRRVYRNSGYGE 293 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 + P + LW +SG +D+Y + M D + P + +F + SYR+L Sbjct: 294 LRCPQILDVSLWQKSGHWDNYKENMF-FTDSEKRTYAVKPMNCPGHVQVFNQGLHSYRDL 352 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P + + R+E G++R R F D + F T + L+++ Sbjct: 353 PIRYGEFGACHRNEPSGALHGLLRVRGFTQDDGHIFC-TEAQIESEVTAFHRQALQVYAD 411 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 G + I ++ P D + Sbjct: 412 FGFEDIQIKIALRPDKR-----------------LGDSLSWDKAEAALRAALSACEVEWQ 454 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 + A Y + H L D++ ++ ++ G A + Sbjct: 455 ELPGEGAFYGPKIEYH---LKDAIGRTWQLGTIQVDFMMPGRLG--------AEYVDERS 503 Query: 308 KDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + + + +G+M ++ + IWP +AP ++ + NI + E Sbjct: 504 QRCHPVMLHRAIVGSMERFIGILI---EHYAGIWPTWLAPVQVVVANIT---DAQYEYAE 557 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 +++ L G V D E+IG + L P ++VG + + V ++ Sbjct: 558 RVHKALLNQGFRVNTDLRNEKIGYKIREHTLQRVPYLLVVGDREKENGTVAVRTCSREDL 617 Query: 427 EDMSLEEVINYASHR 441 MS+ + Sbjct: 618 GAMSISAFVERLQAE 632 >gi|320539025|ref|ZP_08038700.1| threonyl-tRNA synthetase [Serratia symbiotica str. Tucson] gi|320030958|gb|EFW12962.1| threonyl-tRNA synthetase [Serratia symbiotica str. Tucson] Length = 642 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 73/442 (16%), Positives = 139/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + A +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTVFRELEAFVRMKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYKDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMGEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVRAE-VNACIRMVYDV 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ + P + + A+ + Sbjct: 408 YATFGFDKIAVKLSTRPEKRIGTDDMWTRAE-----------------EDLAAALTENGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ F+ + S A++ Sbjct: 451 PLEYQLGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FFLPGRLS----ASYVS 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D V + +G+M ++ + G W V +++ D Sbjct: 500 EDNDRVVPVMIHRAILGSMERFIGILTEEYAGFYPTWIAPVQVVVMNIT------DSQSD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L G D E+IG + L P ++ G K V V ++ R Sbjct: 554 YVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGNVAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + EV+N + Sbjct: 614 KDLGSQDVNEVVNKLLKEIRSR 635 >gi|239618448|ref|YP_002941770.1| threonyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] gi|259516548|sp|C5CI64|SYT_KOSOT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|239507279|gb|ACR80766.1| threonyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] Length = 648 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 81/444 (18%), Positives = 154/444 (34%), Gaps = 41/444 (9%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +++E RD +L L + ++++ G+ + P G L+ + RE ++ Sbjct: 232 EAYLKMMEEAKKRDHRKIGPQLGLFS-FSYEYAPGMPIYHPKGTIVLNELMKFSREVHSK 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + + LW SG +D Y M +++++ P + I++S Sbjct: 291 HGYQEVMTPQIMNDVLWHRSGHWDHYRDNM-YFTEKDEQQYAIKPMNCPGHILIYKSRAM 349 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP ++ R E G++R R F+ DA+ F + K + Sbjct: 350 SYRDLPLKLFEFGKVHRYERSGVLHGLLRVRGFIQDDAHIFCTREQ-LKEQLKDVIRFVD 408 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 I+ G + + P E D + + I Sbjct: 409 MIYTPFGFEYRAD-LCTRPEDFMGDVE-----------------IWDLATEALKDAIESI 450 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + E A Y D H + DS+ + + ++ T+ Sbjct: 451 GLEYKVNEGDGAFYGPKIDFH---VTDSIGREWQCATIQLDF--------MMPERFELTY 499 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G D K++ + G++ ++ + G W +AP ++ I I Sbjct: 500 VGPDNKEYRPVMIHRAIYGSLDRFFGILIEHYAGAFPTW---LAPVQVVAIPISDKH--- 553 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ L+ G V D+ + + A L P +I+G K + ++ R Sbjct: 554 VDYAREVADALAAEGVRVDVDEKQKSTNYKIREAQLNKIPYMLILGDKEKESETITVRLR 613 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 M L E SN Sbjct: 614 TGKNIYGMKLAEFSAKLKEEISNR 637 >gi|229032221|ref|ZP_04188194.1| Threonyl-tRNA synthetase [Bacillus cereus AH1271] gi|229076078|ref|ZP_04209046.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-18] gi|229105203|ref|ZP_04235852.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-28] gi|228678129|gb|EEL32357.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-28] gi|228706941|gb|EEL59146.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-18] gi|228729001|gb|EEL80004.1| Threonyl-tRNA synthetase [Bacillus cereus AH1271] Length = 645 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 79/433 (18%), Positives = 167/433 (38%), Gaps = 30/433 (6%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L T + +G+ WLP G + I +++ G Sbjct: 237 LRMLEEAKERDHRKLGKELKLFTN-SQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGY 295 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG ++ Y M + +++ ++ P + ++++ I SYR Sbjct: 296 DHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYR 355 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K ++ L ++ Sbjct: 356 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYK 415 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 GL++ R + ADT + + + + D++ Sbjct: 416 DFGLENYSFRLS-----------YRDPADTK--KYYADDEMWEKAQGMLKEAMDEMGLDY 462 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y DV ++ +L +++ +S ++ F ++ + G D Sbjct: 463 YEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERF----ELAYVGED 511 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 GK H + G + + + + +P +AP + +I + QV D + Sbjct: 512 GKQHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQAQVIPVSP--QVHLDYAK 567 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+ L + G V D E+IG + A + P ++VG V+++ V ++ Sbjct: 568 KVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKS 627 Query: 427 EDMSLEEVINYAS 439 E ++L+ ++ Sbjct: 628 ETIALDAFVDMIK 640 >gi|218961058|ref|YP_001740833.1| threonyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans] gi|167729715|emb|CAO80627.1| threonyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans] Length = 633 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 84/439 (19%), Positives = 144/439 (32%), Gaps = 39/439 (8%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E RD L L + + + G+ W P G + +E+ + G Sbjct: 231 YLHFLEEASKRDHRKLGKDLELFS-ISDEVGPGLVLWHPKGAMVRHLIETYWKEQHLKKG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P L A+LW SG D Y + M D + P + I+ S + SY Sbjct: 290 YQLVYTPHLGRANLWETSGHLDFYKENMYSKMDIEGQDYYIKPMNCPFHISIYNSSLHSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP ++ +R E G+MR R F DA+ + Sbjct: 350 RELPIRLAELGTVYRYERSGVLHGLMRVRGFTQDDAHIICTPEQMDME------------ 397 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + EF++ T K+ D S + Sbjct: 398 ------VDKLIVFSLDMLKAFGFKEFLIYLATKPDDCVGEKEDWDKATASLANSLQKLGL 451 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D+ K+ D+L + + + T+ G Sbjct: 452 EYKVDEGGGAFYGPKIDI---KIKDALGRAWQCTTIQFDFNEP--------ERFDMTYIG 500 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 AD + +G++ A + + P +AP +I LI I + Sbjct: 501 ADNSAHRPYMIHRAVLGSVERFFATLL---EYHSGNLPLWLAPVQIMLIPIT---DAQLN 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 KI +L + G D E++G + A+ P I+G ++++V ++ Sbjct: 555 YARKIEEQLLEQGFRCELDSRSEKMGYKIRSAEKNKIPFMCILGKNEENNNQVTLRQHTV 614 Query: 424 GIREDMSLEEVINYASHRF 442 G M+LE I Sbjct: 615 GDLGAMNLEAAIAILRKEL 633 >gi|307272094|ref|ZP_07553357.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0855] gi|306511210|gb|EFM80217.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0855] Length = 660 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 161/443 (36%), Gaps = 34/443 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L M+ + G+ WLP G + I +++ Sbjct: 246 FIKMREEAKERDHRKLGKELDLF--MVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISL 303 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D M + P + ++++ I Sbjct: 304 GYQHVYTPIMADVELYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIH 363 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + + + Sbjct: 364 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA 423 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ + R D T + D M + D++ Sbjct: 424 VYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKAAMDEL 469 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ F ++ T+ Sbjct: 470 ELDYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTY 518 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++ + + + G + + + + +P +AP + ++I + + Sbjct: 519 VGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV--EAHS 575 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +I RL G V DD E++G + + P Q++VG K + D+ V ++ Sbjct: 576 EYAYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKVPYQLVVGDKEMEDATVNVRRYG 635 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L I+ + N Sbjct: 636 SKETSVEDLSIFIDSMAAEVHNY 658 >gi|255020885|ref|ZP_05292941.1| Prolyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756] gi|254969676|gb|EET27182.1| Prolyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756] Length = 572 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 118/235 (50%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ FLP+L+E P +AE+ SH+L+LR G I + + G+Y+WLPLG + L V ++REE Sbjct: 1 MRASQSFLPLLKETPAEAELVSHQLLLRGGFIRRLASGLYTWLPLGLRVLRRVEQVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ + +Q A+LW ESGR++ YG E+LRL DR+ + GPTHEEV++D+ R Sbjct: 61 MDRSGAQEILMTVVQPAELWQESGRWELYGPELLRLKDRHQRDFCLGPTHEEVISDLARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR LP YQIQ KFRDE+RPRFG+MR+REF+MKDAYSF + + Y M+ + Sbjct: 121 EIRSYRQLPVNLYQIQTKFRDEIRPRFGLMRAREFIMKDAYSFHMDQASLEEGYRAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y R+F RLGL + A+SG IGG SHEF VLAD+GE + + D+ E Sbjct: 181 YCRVFQRLGLDFRAVEADSGAIGGKRSHEFHVLADSGEDAIAFCRHC-DYAANVE 234 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 60/185 (32%), Positives = 94/185 (50%), Gaps = 4/185 (2%) Query: 258 ATSDVHNEKLFDSLPEN---KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A +D+ + D P RGIEVGH+F GT+YS + G++ V M Sbjct: 384 AWADLRLVQAGDPCPRCAGGSLEICRGIEVGHVFQLGTRYSERLGVRVLDEGGREQTVLM 443 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG R+VAA +E SHD +GI+WP+++APF++ ++ I A +++ RL Sbjct: 444 GCYGIGVSRIVAATVEQSHDERGIVWPEALAPFRVGIVAINGRKSPAVLSAALELHDRLE 503 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G DD E+ G QFA DL+G P +V+V K ++ +E + R ++ + Sbjct: 504 AAGIPTLLDDRDERPGVQFATLDLIGLPHRVVVSDKLLAQGMLEYRARRDSDNRLLTPDA 563 Query: 434 VINYA 438 + Sbjct: 564 LWELL 568 >gi|327536012|gb|AEA94846.1| threonine--tRNA ligase [Enterococcus faecalis OG1RF] Length = 660 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 161/443 (36%), Gaps = 34/443 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L M+ + G+ WLP G + I +++ Sbjct: 246 FIKMREEAKERDHRKLGKELDLF--MVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISL 303 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D M + P + ++++ I Sbjct: 304 GYQHVYTPIMADVELYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIH 363 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + + + Sbjct: 364 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA 423 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ + R D T + D M + D++ Sbjct: 424 VYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKAAMDEL 469 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ F ++ T+ Sbjct: 470 ELDYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTY 518 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++ + + + G + + + + +P +AP + ++I + + Sbjct: 519 VGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV--EAHS 575 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +I RL G V DD E++G + + P Q++VG K + D+ V ++ Sbjct: 576 EYAYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKVPYQLVVGDKEMEDATVNVRRYG 635 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L I+ + N Sbjct: 636 SKETSVEDLSIFIDSMAAEVHNY 658 >gi|315148859|gb|EFT92875.1| threonyl-tRNA synthetase [Enterococcus faecalis TX4244] Length = 660 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 161/443 (36%), Gaps = 34/443 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L M+ + G+ WLP G + I +++ Sbjct: 246 FIKMREEAKERDHRKLGKELDLF--MVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISL 303 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D M + P + ++++ I Sbjct: 304 GYQHVYTPIMADVELYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIH 363 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + + + Sbjct: 364 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA 423 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ + R D T + D M + D++ Sbjct: 424 VYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKAAMDEL 469 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ F ++ T+ Sbjct: 470 ELDYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTY 518 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++ + + + G + + + + +P +AP + ++I + + Sbjct: 519 VGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV--EAHS 575 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +I RL G V DD E++G + + P Q++VG K + D+ V ++ Sbjct: 576 EYAYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKVPYQLVVGDKEMEDATVNVRRYG 635 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L I+ + N Sbjct: 636 SKETSVEDLSIFIDSMAAEVHNY 658 >gi|229099037|ref|ZP_04229971.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-29] gi|229118067|ref|ZP_04247426.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-3] gi|228665290|gb|EEL20773.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-3] gi|228684265|gb|EEL38209.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-29] Length = 645 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 79/433 (18%), Positives = 167/433 (38%), Gaps = 30/433 (6%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L T + +G+ WLP G + I +++ G Sbjct: 237 LRMLEEAKERDHRKLGKELKLFTN-SQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGY 295 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG ++ Y M + +++ ++ P + ++++ I SYR Sbjct: 296 DHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYR 355 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K ++ L ++ Sbjct: 356 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYK 415 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 GL++ R + ADT + + + + D++ Sbjct: 416 DFGLENYSFRLS-----------YRDPADTK--KYYADDEMWEKAQGMLKEAMDEMGLDY 462 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y DV ++ +L +++ +S ++ F ++ + G D Sbjct: 463 YEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERF----ELAYVGED 511 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 GK H + G + + + + +P +AP + +I + QV D + Sbjct: 512 GKQHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQAQVIPVSP--QVHLDYAK 567 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+ L + G V D E+IG + A + P ++VG V+++ V ++ Sbjct: 568 KVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKS 627 Query: 427 EDMSLEEVINYAS 439 E ++L+ ++ Sbjct: 628 ETIALDAFVDMIK 640 >gi|227554282|ref|ZP_03984329.1| threonyl-tRNA synthetase [Enterococcus faecalis HH22] gi|229544818|ref|ZP_04433543.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1322] gi|307289786|ref|ZP_07569723.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0411] gi|227176572|gb|EEI57544.1| threonyl-tRNA synthetase [Enterococcus faecalis HH22] gi|229310090|gb|EEN76077.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1322] gi|306499171|gb|EFM68649.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0411] gi|315030800|gb|EFT42732.1| threonyl-tRNA synthetase [Enterococcus faecalis TX4000] gi|315575247|gb|EFU87438.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0309B] gi|315582393|gb|EFU94584.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0309A] Length = 660 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 161/443 (36%), Gaps = 34/443 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L M+ + G+ WLP G + I +++ Sbjct: 246 FIKMREEAKERDHRKLGKELDLF--MVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISL 303 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D M + P + ++++ I Sbjct: 304 GYQHVYTPIMADVELYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIH 363 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + + + Sbjct: 364 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA 423 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ + R D T + D M + D++ Sbjct: 424 VYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKAAMDEL 469 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ F ++ T+ Sbjct: 470 ELDYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTY 518 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++ + + + G + + + + +P +AP + ++I + + Sbjct: 519 VGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV--EAHS 575 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +I RL G V DD E++G + + P Q++VG K + D+ V ++ Sbjct: 576 EYAYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKVPYQLVVGDKEMEDATVNVRRYG 635 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L I+ + N Sbjct: 636 SKETSVEDLSIFIDSMAAEVHNY 658 >gi|78222623|ref|YP_384370.1| threonyl-tRNA synthetase [Geobacter metallireducens GS-15] gi|78193878|gb|ABB31645.1| Ser-tRNA(Thr) hydrolase [Geobacter metallireducens GS-15] Length = 645 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 87/440 (19%), Positives = 152/440 (34%), Gaps = 40/440 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G W P G + R+E + G Sbjct: 241 YLERIEEAKRRDHRKLGRELDLFS-FSDEVGAGFVIWHPNGAMLRTILEDFERKEHLKRG 299 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + DLW SG YD+Y + M + +++ P + I++SH++SY Sbjct: 300 YDIVVGPQILKTDLWQRSGHYDNYRENM-YFTEVEEQSFGIKPMNCLSHMMIYKSHLRSY 358 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F+++ R E G++R R F DA+ TPE + + Sbjct: 359 RDLPLRFFELGTVHRHERAGVLHGLLRVRCFTQDDAHILC-TPEQLDDEIKGVISFVNDV 417 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G EF + T + S + + + D Sbjct: 418 MGIFG------------------FEFEMELSTRPEKSIGSDEDWERATNALLGALKDSGR 459 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ KL DSL + + + F ++ T+ Sbjct: 460 PYEINEGDGAFYGPKIDI---KLRDSLDRRWQCATIQCD----FTLPERFD----LTYVD 508 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ + +G++ V+ G +W V +++ + Sbjct: 509 ADGERKRPVMVHRVILGSIERFIGVLIEHFAGNFPVWLSPVQAIVMTVT------DNQQS 562 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ L G V D E++G + A L P +++G K V V + R Sbjct: 563 YAAQVFEALRSSGIRVRKDFRNEKLGFKIREAQLQKIPYMLVIGDKEVESGTVTPRFRDG 622 Query: 424 GIREDMSLEEVINYASHRFS 443 M EE + + + Sbjct: 623 SNLAAMKPEEFVVFINEDVK 642 >gi|77408338|ref|ZP_00785079.1| threonyl-tRNA synthetase [Streptococcus agalactiae COH1] gi|77173019|gb|EAO76147.1| threonyl-tRNA synthetase [Streptococcus agalactiae COH1] Length = 647 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 91/449 (20%), Positives = 164/449 (36%), Gaps = 38/449 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L +E RD +L L M++ + +G+ WLP G + I +++ Sbjct: 227 KAYLKRREEAKERDHRKLGKELDLF--MVNPEVGQGLPFWLPNGATIRRELERYIVDKEI 284 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P + S + + SG +D Y ++M D D + + P + ++++ H Sbjct: 285 ASGYQHVYTPPMASVEFYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNCPHHIEVYKHH 344 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP ++ + R E G+ R RE + DA+ F TPE K + K Sbjct: 345 VHSYRELPIRIAELGMMHRYEKSGALTGLQRVREMTLNDAHIFV-TPEQIKDEFLKALNL 403 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 I+ L R + D E + D Sbjct: 404 IAEIYEDFNLTDYRFRLS-----YRDPEDKHKYYDNDEM--------WENAQAMLKEAMD 450 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D E A Y D+ ++ +L + +S ++ F ++ Sbjct: 451 DFGLDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD----L 499 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GADG++H + GI M A++ ++ G W + I ++ Sbjct: 500 KYIGADGEEHRPIMIHRGGISTMERFTAILIETYKGAFPTWLA-----PQQVSVIPISNE 554 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L G DD E++ + A P Q+IVG K + + V ++ Sbjct: 555 AHIDYAWEVARALKDRGIRAEVDDRNEKMQYKIRAAQTQKIPYQLIVGDKEMEEKAVNVR 614 Query: 420 HRLTGIREDMSLEEVINYASHRF-SNNRP 447 + E S+EE + +RP Sbjct: 615 RYGSKATETKSIEEFVESILADIARKSRP 643 >gi|146310396|ref|YP_001175470.1| prolyl-tRNA synthetase [Enterobacter sp. 638] gi|166980121|sp|A4W6T9|SYP_ENT38 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|145317272|gb|ABP59419.1| prolyl-tRNA synthetase [Enterobacter sp. 638] Length = 572 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 168/235 (71%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLWVESGR++ YG E+LR DR +++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWVESGRWEQYGPELLRFVDRGERSFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKD+YSF + E + +Y+KM+ + Sbjct: 121 ELNSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDSYSFHTSQESLQETYDKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDT-SDYAANIE 234 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 68/189 (35%), Positives = 113/189 (59%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS ++A+ +G DG++ + MG Sbjct: 383 EVADIRNVVAGDPSPDGQGTLMIKRGIEVGHIFQLGTKYSEALNASVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSK 374 YGIG RVVAA IE +HD +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 443 CYGIGVTRVVAAAIEQNHDERGIVWPDNLAPFQVAILPMNMHKSYRVQELAEKLYSELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P V++G + + +E K+R +G ++ + ++ Sbjct: 503 QGIEVLMDDRKERPGVMFADMELIGIPHTVVIGDRNLDSDDIEYKYRRSGEKQMIKTGDI 562 Query: 435 INYASHRFS 443 ++Y Sbjct: 563 LDYLVKAIK 571 >gi|307286857|ref|ZP_07566939.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0109] gi|306502072|gb|EFM71358.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0109] gi|315156485|gb|EFU00502.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0043] gi|315166285|gb|EFU10302.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1302] gi|315169145|gb|EFU13162.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1341] Length = 660 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 161/443 (36%), Gaps = 34/443 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L M+ + G+ WLP G + I +++ Sbjct: 246 FIKMREEAKERDHRKLGKELDLF--MVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISL 303 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D M + P + ++++ I Sbjct: 304 GYQHVYTPIMADVELYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIH 363 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + + + Sbjct: 364 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA 423 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ + R D T + D M + D++ Sbjct: 424 VYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKAAMDEL 469 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ F ++ T+ Sbjct: 470 ELDYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTY 518 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++ + + + G + + + + +P +AP + ++I + + Sbjct: 519 VGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV--EAHS 575 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +I RL G V DD E++G + + P Q++VG K + D+ V ++ Sbjct: 576 EYAYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKVPYQLVVGDKEMEDATVNVRRYG 635 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L I+ + N Sbjct: 636 SKETSVEDLSIFIDSMAAEVHNY 658 >gi|315158985|gb|EFU03002.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0312] Length = 660 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 161/443 (36%), Gaps = 34/443 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L M+ + G+ WLP G + I +++ Sbjct: 246 FIKMREEAKERDHRKLGKELDLF--MVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISL 303 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D M + P + ++++ I Sbjct: 304 GYQHVYTPIMADVELYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIH 363 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + + + Sbjct: 364 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA 423 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ + R D T + D M + D++ Sbjct: 424 VYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKAAMDEL 469 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ F ++ T+ Sbjct: 470 ELDYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTY 518 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++ + + + G + + + + +P +AP + ++I + + Sbjct: 519 VGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV--EAHS 575 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +I RL G V DD E++G + + P Q++VG K + D+ V ++ Sbjct: 576 EYAYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKVPYQLVVGDKEMEDATVNVRRYG 635 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L I+ + N Sbjct: 636 SKETSVEDLSIFIDSMAAEVHNY 658 >gi|270264794|ref|ZP_06193058.1| prolyl-tRNA synthetase [Serratia odorifera 4Rx13] gi|270041092|gb|EFA14192.1| prolyl-tRNA synthetase [Serratia odorifera 4Rx13] Length = 572 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 163/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N AIE+ +P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNANAIEVCMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 EISSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQATYDAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL P+ A++G IGG SHEF VLAD+GE + DF E Sbjct: 181 YSKIFSRMGLDFRPVHADTGSIGGSASHEFQVLADSGEDDIVF-STGSDFAANIE 234 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 72/192 (37%), Positives = 113/192 (58%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ K + RGIEVGHIF GTKYS M AT +G DG++ + Sbjct: 380 PLPQVADIRNVVEGDASPDGKGTLLIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRNQVL 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWPD++APF+++++ + H + E++Y Sbjct: 440 TMGCYGIGVTRVVAAAIEQNHDDRGIIWPDAIAPFQVAILPMNMHKSFRVQALAEELYNT 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P +++G + + ++E K+R G ++ + Sbjct: 500 LRSHGIDVILDDRKERPGVMFADMELIGVPHSIVIGDRNLDSEEIEYKNRRVGEKQMIKT 559 Query: 432 EEVINYASHRFS 443 E++++ + Sbjct: 560 GEIVDFLLGQIK 571 >gi|229087132|ref|ZP_04219282.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-44] gi|228696200|gb|EEL49035.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-44] Length = 643 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 80/433 (18%), Positives = 168/433 (38%), Gaps = 30/433 (6%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L T + +G+ WLP G + I +++ G Sbjct: 235 LRMLEEAKERDHRKLGKELKLFTN-SQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGY 293 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG ++ Y M + +++ ++ P + ++++ I SYR Sbjct: 294 DHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYR 353 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K ++ L ++ Sbjct: 354 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYK 413 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 GL++ R + ADT + + + + D++ Sbjct: 414 DFGLENYSFRLS-----------YRDPADTK--KYYADDEMWEKAQSMLKEAMDEMGLEY 460 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y DV ++ +L +++ +S ++ F ++ T+ G D Sbjct: 461 YEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERF----ELTYVGED 509 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 GK H + G + + + + +P +AP ++ +I + QV D + Sbjct: 510 GKQHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVQVIPVSP--QVHLDYAK 565 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+ L + G V D E+IG + A + P ++VG V+++ V ++ Sbjct: 566 KVQEELQRAGIRVEVDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKS 625 Query: 427 EDMSLEEVINYAS 439 E ++L+ + Sbjct: 626 ETIALDAFVEMIK 638 >gi|157156008|ref|YP_001461365.1| prolyl-tRNA synthetase [Escherichia coli E24377A] gi|166980119|sp|A7ZHT6|SYP_ECO24 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157078038|gb|ABV17746.1| prolyl-tRNA synthetase [Escherichia coli E24377A] Length = 572 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRIGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDT-SDYAANIE 234 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 112/189 (59%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 383 EVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 443 CYGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++ Sbjct: 503 QGIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDI 562 Query: 435 INYASHRFS 443 + Y + Sbjct: 563 VEYLVKQIK 571 >gi|315033108|gb|EFT45040.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0017] Length = 672 Score = 249 bits (636), Expect = 7e-64, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 161/443 (36%), Gaps = 34/443 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L M+ + G+ WLP G + I +++ Sbjct: 258 FIKMREEAKERDHRKLGKELDLF--MVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISL 315 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D M + P + ++++ I Sbjct: 316 GYQHVYTPIMADVELYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIH 375 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + + + Sbjct: 376 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA 435 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ + R D T + D M + D++ Sbjct: 436 VYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKAAMDEL 481 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ F ++ T+ Sbjct: 482 ELDYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTY 530 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++ + + + G + + + + +P +AP + ++I + + Sbjct: 531 VGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV--EAHS 587 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +I RL G V DD E++G + + P Q++VG K + D+ V ++ Sbjct: 588 EYAYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKVPYQLVVGDKEMEDATVNVRRYG 647 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L I+ + N Sbjct: 648 SKETSVEDLSIFIDSMAAEVHNY 670 >gi|312951108|ref|ZP_07770013.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0102] gi|310630884|gb|EFQ14167.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0102] gi|315154152|gb|EFT98168.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0031] Length = 660 Score = 249 bits (636), Expect = 7e-64, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 161/443 (36%), Gaps = 34/443 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L M+ + G+ WLP G + I +++ Sbjct: 246 FIKMREEAKERDHRKLGKELDLF--MVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISL 303 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D M + P + ++++ I Sbjct: 304 GYQHVYTPIMADVELYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIH 363 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + + + Sbjct: 364 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA 423 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ + R D T + D M + D++ Sbjct: 424 VYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKAAMDEL 469 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ F ++ T+ Sbjct: 470 ELDYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTY 518 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++ + + + G + + + + +P +AP + ++I + + Sbjct: 519 VGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV--EAHS 575 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +I RL G V DD E++G + + P Q++VG K + D+ V ++ Sbjct: 576 EYAYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKVPYQLVVGDKEMEDATVNVRRYG 635 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L I+ + N Sbjct: 636 SKETSVEDLSIFIDSMAAEVHNY 658 >gi|163752580|ref|ZP_02159762.1| threonyl-tRNA synthetase [Shewanella benthica KT99] gi|161327534|gb|EDP98738.1| threonyl-tRNA synthetase [Shewanella benthica KT99] Length = 642 Score = 249 bits (636), Expect = 7e-64, Method: Composition-based stats. Identities = 79/445 (17%), Positives = 145/445 (32%), Gaps = 41/445 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K L L+E RD +L L + + + G+ W G + IRE+ Sbjct: 227 KALKIHLNRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTLFLELEKFIREK 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + E+ P + LW SG +D Y + M ++ + P + IF Sbjct: 285 LGQYTYQEVKGPLMMDRVLWERSGHWDKYSEAMFT-TKSENREYVIKPMNCPGHVQIFNQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F T + + + Sbjct: 344 GLKSYRDLPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQVQQEVSACIK 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + G +I ++ + P E D + Sbjct: 403 MVYDTYATFGFNNIVIKLSTRPEQRIGDDE-----------------MWDRAEEALKQAL 445 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 I+ A Y + L D L + ++ G Sbjct: 446 IANDIEFEILPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDYALPGRLG-------- 494 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 AT+ D + +G++ ++ + GK W + +++ Sbjct: 495 ATYVAEDNSRQTPVMIHRAILGSLERFLGILIEEYAGKFPTWLAPMQVVVMNIT------ 548 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D ++ L + G D E+IG + L P ++VG + + + +V + Sbjct: 549 DKQSDYAHEVVNLLKENGIRASKDLRNEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAV 608 Query: 419 KHRLTGIREDMSLEEVINYASHRFS 443 + R M +EE + + S Sbjct: 609 RTRDGVDLGKMRIEEFAAKVNKQIS 633 >gi|307634865|gb|ADI84351.2| threonyl-tRNA synthetase [Geobacter sulfurreducens KN400] Length = 645 Score = 249 bits (636), Expect = 7e-64, Method: Composition-based stats. Identities = 84/440 (19%), Positives = 144/440 (32%), Gaps = 40/440 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + G W P G + R E + G Sbjct: 241 YLEKIEEAKRRDHRKLGRELDLFS-FSDDVGAGFVIWHPKGAMLRTLLEDFERREHLKRG 299 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +LW SG YD+Y + M + + P + I++S ++SY Sbjct: 300 YDIVVGPQILKTELWQRSGHYDNYRENM-YFTEVEGQGFGIKPMNCLSHMMIYKSQLRSY 358 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F+++ R E G++R R F DA+ TPE + + Sbjct: 359 RDLPLRFFELGTVHRHERAGVLHGLLRVRCFTQDDAHILC-TPEQLDAEIKGVISFVNDV 417 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G + P S E + + D Sbjct: 418 MGIFGFDYEM-ELSTRPEKSIGSDE-----------------DWERATGALLGALKDSGR 459 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ KL DSL + + + F ++ T+ Sbjct: 460 PYEINEGDGAFYGPKIDI---KLRDSLDRKWQCATIQCD----FTLPERFD----LTYVD 508 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ + +G++ V+ G +W V +++ + Sbjct: 509 ADGERKRPVMVHRVILGSIERFIGVLIEHFAGNFPLWLSPVQAIVLTVT------DNQQP 562 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ L G V D E++G + A L P +++G K V V + R Sbjct: 563 YAAQVFETLRTNGVRVQKDFRNEKLGFKIREAQLQKIPYMLVIGDKEVESGTVTPRFRDG 622 Query: 424 GIREDMSLEEVINYASHRFS 443 M EE + + + Sbjct: 623 SNLAAMKPEEFVAFVNDEVK 642 >gi|293382457|ref|ZP_06628392.1| threonine--tRNA ligase [Enterococcus faecalis R712] gi|293387159|ref|ZP_06631720.1| threonine--tRNA ligase [Enterococcus faecalis S613] gi|312906512|ref|ZP_07765514.1| threonyl-tRNA synthetase [Enterococcus faecalis DAPTO 512] gi|312910456|ref|ZP_07769302.1| threonyl-tRNA synthetase [Enterococcus faecalis DAPTO 516] gi|291080141|gb|EFE17505.1| threonine--tRNA ligase [Enterococcus faecalis R712] gi|291083430|gb|EFE20393.1| threonine--tRNA ligase [Enterococcus faecalis S613] gi|310627455|gb|EFQ10738.1| threonyl-tRNA synthetase [Enterococcus faecalis DAPTO 512] gi|311289228|gb|EFQ67784.1| threonyl-tRNA synthetase [Enterococcus faecalis DAPTO 516] Length = 660 Score = 249 bits (636), Expect = 7e-64, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 161/443 (36%), Gaps = 34/443 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L M+ + G+ WLP G + I +++ Sbjct: 246 FIKMREEAKERDHRKLGKELDLF--MVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISL 303 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D M + P + ++++ I Sbjct: 304 GYQHVYTPIMADVELYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIH 363 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + + + Sbjct: 364 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA 423 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ + R D T + D M + D++ Sbjct: 424 VYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKAAMDEL 469 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ F ++ T+ Sbjct: 470 ELDYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTY 518 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++ + + + G + + + + +P +AP + ++I + + Sbjct: 519 VGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV--EAHS 575 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +I RL G V DD E++G + + P Q++VG K + D+ V ++ Sbjct: 576 EYAYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKVPYQLVVGDKEMEDATVNVRRYG 635 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L I+ + N Sbjct: 636 SKETSVEDLSIFIDSMAAEVHNY 658 >gi|228987823|ref|ZP_04147932.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229158179|ref|ZP_04286246.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 4342] gi|228625137|gb|EEK81897.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 4342] gi|228771871|gb|EEM20328.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 645 Score = 249 bits (636), Expect = 7e-64, Method: Composition-based stats. Identities = 79/433 (18%), Positives = 167/433 (38%), Gaps = 30/433 (6%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L T + +G+ WLP G + I +++ G Sbjct: 237 LRMLEEAKERDHRKLGKELKLFTN-SQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGY 295 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG ++ Y M + +++ ++ P + ++++ I SYR Sbjct: 296 DHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYR 355 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K ++ L ++ Sbjct: 356 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYK 415 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 GL++ R + ADT + + + + D++ Sbjct: 416 DFGLENYSFRLS-----------YRDPADTK--KYYADDEMWEKAQGMLKEAMDEMGLDY 462 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y DV ++ +L +++ +S ++ F ++ + G D Sbjct: 463 YEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERF----ELAYVGED 511 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 GK H + G + + + + +P +AP + +I + QV D + Sbjct: 512 GKQHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQAQVIPVSP--QVHLDYAK 567 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+ L + G V D E+IG + A + P ++VG V+++ V ++ Sbjct: 568 KVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKS 627 Query: 427 EDMSLEEVINYAS 439 E ++L+ ++ Sbjct: 628 ETIALDAFVDMIK 640 >gi|171463692|ref|YP_001797805.1| threonyl-tRNA synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|238689063|sp|B1XV14|SYT_POLNS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|171193230|gb|ACB44191.1| threonyl-tRNA synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 640 Score = 249 bits (636), Expect = 7e-64, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 141/442 (31%), Gaps = 41/442 (9%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + G+ W P G V +R + G Sbjct: 231 YLHMLEESEKRDHRRLGKQLDLF--HFQEEAPGLIFWHPKGWSIWQEVEQYMRRVYQQEG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +++Y + M + ++A P + I+ S + SY Sbjct: 289 YQEVKAPQILDRGLWEKSGHWENYKENMFT-TESENRAYALKPMNCPGHVQIYNSGLHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP F + R+E G+MR R F D + F + + + Sbjct: 348 RELPLRFGEFGQCHRNEPSGALHGLMRVRGFTQDDGHIFCTEDQIQSE-VAAFDKAVRAV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + ++ P D + Sbjct: 407 YQDFGFTEVAVKLALRPAKR-----------------VGDDAIWDKAEEALRGALKASGQ 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + H L DS+ + ++ G A + Sbjct: 450 EWEELPGEGAFYGPKIEYH---LKDSIGRTWQCGTIQVDFSMPARLG--------AEYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + +G++ ++ + P +AP + ++NI + Sbjct: 499 ENNSRKTPVMLHRAIVGSLERFIGILI---ENHTGNMPVWLAPTQAVVLNISGNSA---A 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ L K G + D E+I + L P +IVG K + V ++ R Sbjct: 553 YAQQVQQLLKKQGFRIESDLRNEKITYKIREYALQKTPFLLIVGDKESESNTVAVRARGG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M L+ + S Sbjct: 613 VDLGVMPLDAFVARLQQDISQK 634 >gi|307544897|ref|YP_003897376.1| prolyl-tRNA synthetase [Halomonas elongata DSM 2581] gi|307216921|emb|CBV42191.1| prolyl-tRNA synthetase [Halomonas elongata DSM 2581] Length = 573 Score = 249 bits (636), Expect = 7e-64, Method: Composition-based stats. Identities = 126/237 (53%), Positives = 166/237 (70%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ + L+E P DA+I SH+LMLR GMI + + G+Y+WLPLG + L V I+REE Sbjct: 1 MRASQLLIATLKETPADADIVSHQLMLRAGMIRRLNAGLYTWLPLGLRTLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P +Q A+LW ESGR+D YG +LR+ DR+D+ YGPTHEEV+TD+ R+ Sbjct: 61 MNRAGAQEVLMPAIQPAELWQESGRWDQYGNLLLRIRDRHDRDFCYGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ +P FYQIQ KFRDE RPRFGVMR+REF+MKDAYSFD+ G + SY+ M+ + Sbjct: 121 ELRSYKQVPSNFYQIQTKFRDETRPRFGVMRAREFIMKDAYSFDVDQAGLQRSYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y+RIF RLGL + A++G IGG SHEF VLAD+GE V D+ E Sbjct: 181 YVRIFTRLGLDFRAVEADNGDIGGSGSHEFQVLADSGEDAVVF-STSSDYAANIEKA 236 Score = 140 bits (353), Expect = 5e-31, Method: Composition-based stats. Identities = 74/205 (36%), Positives = 111/205 (54%), Gaps = 3/205 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPM 298 D I + +D+ N D P+ + ARGIEVGH+F GTKYS M Sbjct: 367 DGKHYFGINWERDVALPKVADLRNVVEGDPSPDGQGTLSIARGIEVGHVFQLGTKYSTAM 426 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 +AT +G+ + MG YGIG RVVAA IE +HD GIIWPD++APF ++L+ + A Sbjct: 427 NATVLDDNGQAVPLLMGCYGIGVTRVVAAAIEQNHDDAGIIWPDAIAPFNVALVPMNAHK 486 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 Q RD E++Y LS G DV DD + G +FA +L+G P ++++G + + ++E Sbjct: 487 SQRVRDESERLYQALSDAGLDVLLDDRDLRPGVRFADQELMGIPHRIVIGDRSLDKGELE 546 Query: 418 IKHRLTGIREDMSLEEVINYASHRF 442 K R + +++VI + + Sbjct: 547 YKGRRDSEATMIPIDDVIAFLREKI 571 >gi|261245474|emb|CBG23264.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] Length = 572 Score = 249 bits (636), Expect = 7e-64, Method: Composition-based stats. Identities = 124/235 (52%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y + L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLVSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + S D+ E Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSD-VSDYAANIE 234 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 383 VVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 443 CYGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + ++ Sbjct: 503 QGIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDI 562 Query: 435 INYASHRFS 443 ++Y Sbjct: 563 VDYLVKAIK 571 >gi|260583498|ref|ZP_05851246.1| threonine--tRNA ligase [Granulicatella elegans ATCC 700633] gi|260158124|gb|EEW93192.1| threonine--tRNA ligase [Granulicatella elegans ATCC 700633] Length = 647 Score = 249 bits (636), Expect = 7e-64, Method: Composition-based stats. Identities = 73/446 (16%), Positives = 160/446 (35%), Gaps = 33/446 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 FL + +E RD +L L MI + G+ WLP G + I +++ Sbjct: 229 FLKMREEAKERDHRKLGKELDLF--MISQEVGSGLPFWLPKGATIRRTIERYIVDKEISL 286 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHIK 123 G + P + L+ SG + Y ++M D D ++ P + ++++HI Sbjct: 287 GYQHVYTPVMADVGLYKTSGHWAHYQEDMFPPMDMGDGELLVLRPMNCPHHMMVYKNHIH 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + ++ Sbjct: 347 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRILDLIRE 406 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ +K R + D E + D++ Sbjct: 407 VYKDFNVKDYRFRLS-----YRDPEDKHKYFDDDEM--------WNKAEAMLKEAMDEMG 453 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 A Y D+ + ++ + +S ++ F ++ T+ Sbjct: 454 LEYFEAIGEAAFYGPKLDI---QFKTAMGLEETMSTIQLD----FLLPERFD----LTYV 502 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 G DG + + + + G + + + +P +AP + ++I + + D Sbjct: 503 GEDGDNTHRPVVIHR-GVVSTAERFVAYLIEEYKGAFPTWLAPVQATIIPVSV--EHHYD 559 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 A + ++ +G V DD E++G + + P Q+++G K V + V ++ + Sbjct: 560 AARALKEKMMSLGLRVELDDRNEKMGYKIRASQTQKIPYQLVIGDKEVEEGTVTVRRYGS 619 Query: 424 GIREDMSLEEVINYASHRFSN-NRPV 448 M++ + +N +RP+ Sbjct: 620 KETVSMTIGAYLERVQREIANFSRPL 645 >gi|315646839|ref|ZP_07899954.1| threonyl-tRNA synthetase [Paenibacillus vortex V453] gi|315277769|gb|EFU41093.1| threonyl-tRNA synthetase [Paenibacillus vortex V453] Length = 635 Score = 249 bits (636), Expect = 7e-64, Method: Composition-based stats. Identities = 88/434 (20%), Positives = 155/434 (35%), Gaps = 39/434 (8%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L M + G+ +LP G + + RE Q G E+ P Sbjct: 239 AKKRDHRKLGKELGLF--MFSDDAPGMPFFLPKGTIIRNELEQFARELQFHRGYDEVRTP 296 Query: 73 TLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + + LW SG +D Y M +++ + P + ++++ + SYR LP Sbjct: 297 LMMNKRLWEMSGHWDHYKDNMYFSK-VDEQEYVMKPMNCPGHMLVYQNSLHSYRELPIRL 355 Query: 133 YQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 + R E G+MR R F DA+ F + ++ +++ G Sbjct: 356 SEFGQVHRHEYSGALSGMMRVRTFCQDDAHIFVRPDQIHDE-IGQVIDFISQVYRVFGFD 414 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ 251 + P S E A++ +V D I E Sbjct: 415 YTI-ELSTRPEDSMGSDELWEQAESSLQEVL-----------------DQQKLPYRINEG 456 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A Y D H + DSL + + ++ F F K+ L A + K Sbjct: 457 DGAFYGPKIDFH---ILDSLKRSWQCGTIQLD----FQFPEKFDLSYIAE---DNQKHRP 506 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 V + G++ ++ + G +P +AP + LI + H D K+ R Sbjct: 507 VVIHRAVFGSIERFIGILT---EHYGGAFPLWLAPVHVMLIPVSDH---YIDFSLKVKKR 560 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G V D E++G + A LL P ++G K ++ V ++ R G + ++ Sbjct: 561 LEHAGVRVEVDIRNEKLGYKIREAGLLKTPYTFVLGEKEMNSDLVAVRKRGEGELGESAI 620 Query: 432 EEVINYASHRFSNN 445 +++I + Sbjct: 621 DDMIARLRKEIESR 634 >gi|253699963|ref|YP_003021152.1| prolyl-tRNA synthetase [Geobacter sp. M21] gi|259511598|sp|C6E496|SYP_GEOSM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|251774813|gb|ACT17394.1| prolyl-tRNA synthetase [Geobacter sp. M21] Length = 573 Score = 249 bits (636), Expect = 7e-64, Method: Composition-based stats. Identities = 128/251 (50%), Positives = 171/251 (68%), Gaps = 1/251 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+P ++E P DAE+ SHKLMLR GMI + + GIY++LP G +++ V AI+REE Sbjct: 1 MRYSQYFIPTVKETPSDAEVISHKLMLRAGMIRKLAAGIYNYLPFGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YGKE+LR DR D GPTHEEV+TD+ R Sbjct: 61 MNRAGAIELLMPAVQPAELWKESGRWEFYGKELLRFNDRKDAEFCMGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ G+ SY KM+ + Sbjct: 121 EVRSYRQLPINLYQIQGKFRDEIRPRFGLMRGREFIMKDAYSFDVNEAGADVSYEKMYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK + A++G IGG+ SHEF+VLAD+GE + ++ E + Sbjct: 181 YRRIFERCGLKFRAVEADTGTIGGNYSHEFMVLADSGEDAIVSCSAC-EYAANMEKAETR 239 Query: 241 DIISLNSIVEQ 251 + + Sbjct: 240 KGEGIEHADPR 250 Score = 189 bits (479), Expect = 9e-46, Method: Composition-based stats. Identities = 77/196 (39%), Positives = 110/196 (56%), Gaps = 3/196 (1%) Query: 256 YAATSDVHNEKLFDSLPEN---KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 + D+ N + D+ P K RGIEVGH+F GTKYS + ATF ADGK+ + Sbjct: 378 VSGFVDIRNVVIGDACPRCDSGKLEIWRGIEVGHVFKLGTKYSKALKATFLDADGKEQTI 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R VAA IE +HD GII+P +APF+ + ++ + + A E IY L Sbjct: 438 FMGCYGIGVGRTVAACIEQNHDENGIIFPIPIAPFQCIISSLSVKEDEVKAASESIYQEL 497 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 + G +V DD E+ G +F ADL+G PL+++VG+K +++ KVE+K R +G E + + Sbjct: 498 LEAGIEVLLDDRDERPGFKFKDADLIGIPLRIVVGAKALAEGKVELKERRSGEVEVLPIA 557 Query: 433 EVINYASHRFSNNRPV 448 E I V Sbjct: 558 EAIAKVKAAVKEALQV 573 >gi|330964813|gb|EGH65073.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 571 Score = 249 bits (636), Expect = 7e-64, Method: Composition-based stats. Identities = 122/270 (45%), Positives = 174/270 (64%), Gaps = 10/270 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M ++ Sbjct: 121 ELNSYKQLPINMYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADNASLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F RLGLK P+ A++G IGG SHEF VLA++GE + + D+ E + Sbjct: 181 YSNVFSRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVF-SNGSDYAANIEKAEA- 238 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 V + A AAT ++ D+ Sbjct: 239 --------VPREKARAAATEELRLVDTPDA 260 Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 111/207 (53%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ + RGIEVGHIF GTKYS M Sbjct: 364 DDKHYFGVNWERDLPVPTVADLRNVVAGDPSPDGQGTLEIKRGIEVGHIFQLGTKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK + MG YGIG RVVAA IE + D GIIW D++APF+I+LI ++ Sbjct: 424 KCQVLGENGKPVNLAMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALIPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 R+A +K+YA L+ G +V DD + G +FA +L+G P +++V + +++ + Sbjct: 484 DAVREATDKLYAELTAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNL 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K R + +++ +V+++ R Sbjct: 544 EYKSRTESQPQAIAVADVLSFIQGRVK 570 >gi|330872665|gb|EGH06814.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 571 Score = 249 bits (636), Expect = 7e-64, Method: Composition-based stats. Identities = 122/270 (45%), Positives = 174/270 (64%), Gaps = 10/270 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M ++ Sbjct: 121 ELNSYKQLPINMYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADNASLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F RLGLK P+ A++G IGG SHEF VLA++GE + + D+ E + Sbjct: 181 YSNVFSRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVF-SNGSDYAANIEKAEA- 238 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 V + A AAT ++ D+ Sbjct: 239 --------VPREKARAAATEELRLVDTPDA 260 Score = 159 bits (403), Expect = 7e-37, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 112/207 (54%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P A +D+ N D P+ + RGIEVGHIF GTKYS M Sbjct: 364 DDKHYFGVNWERDLPVPAVADLRNVVAGDPSPDGQGTLEIKRGIEVGHIFQLGTKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK + MG YGIG RVVAA IE + D GIIW D++APF+I+LI ++ Sbjct: 424 KCQVLGENGKPVNLAMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALIPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 R+A +K+YA L+ G +V DD + G +FA +L+G P +++V + +++ + Sbjct: 484 DAVREATDKLYAELTAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNL 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K R + +++ +V+++ R Sbjct: 544 EYKSRTESQPQAIAVADVLSFIQGRVK 570 >gi|114152232|sp|Q3IGT7|SYP_PSEHT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 574 Score = 249 bits (635), Expect = 7e-64, Method: Composition-based stats. Identities = 123/237 (51%), Positives = 157/237 (66%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAEI SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYILATLKETPSDAEIVSHQLMLRAGMIRRVASGLYTWLPTGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ AIEM +P +Q ADLW ESGR+D +G E++R DR+++ GPTHEEV+TD R Sbjct: 61 MNKANAIEMLMPVIQPADLWEESGRWDEFGPELMRFTDRHNRTFALGPTHEEVITDFVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP + YQIQ K RDE RPRFGVMR+REF MKDAYSF L+ E +Y M + Sbjct: 121 EISSYKQLPISLYQIQTKVRDERRPRFGVMRAREFTMKDAYSFHLSDECLDATYQVMHKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF RL L P+ A++G IGG +SHEF VLA++GE + S D+ E Sbjct: 181 YCNIFERLNLDYRPVIADTGSIGGSVSHEFHVLAESGEDAIAFSD-GSDYAANIEKA 236 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 99/189 (52%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D+ + RGIEVGHIF GTKYS M A GK+ + MG Sbjct: 385 EVADIRNIVEGDASPCGQGTLQIKRGIEVGHIFQLGTKYSQAMKAGVLNESGKNQIMTMG 444 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSK 374 YGIG R+VAA IE ++D GIIWP +APF ++++ + D +Y L Sbjct: 445 CYGIGVSRIVAAAIEQNNDQYGIIWPQPIAPFDLAIVPMNMHKSHRIPDIATNLYQGLKD 504 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV +DD E+ G F +L+G P +++G + + ++KVE+K+R TG + + ++ Sbjct: 505 AGLDVLFDDRKERPGVMFNDMELIGVPFTLVIGERNLDENKVELKNRRTGEKLMIDIDTA 564 Query: 435 INYASHRFS 443 I+ Sbjct: 565 IDAIKAAVK 573 >gi|315498771|ref|YP_004087575.1| threonyl-tRNA synthetase [Asticcacaulis excentricus CB 48] gi|315416783|gb|ADU13424.1| threonyl-tRNA synthetase [Asticcacaulis excentricus CB 48] Length = 640 Score = 249 bits (635), Expect = 7e-64, Method: Composition-based stats. Identities = 77/440 (17%), Positives = 150/440 (34%), Gaps = 40/440 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + ++ L+E RD ++ L + + +G+ W P G + A +R + Sbjct: 231 QAYITRLEEAEKRDHRKLGRQMNLF--HMQEEGRGMVFWHPHGWTLWRTLEAYMRRRLDA 288 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G +E+ P + W +SG +D Y M + + P + IF+ ++ Sbjct: 289 AGYVEVKTPQVLDRTFWEKSGHWDKYRPNMFVCETVEGETLSLKPMNCPGHVQIFKVGLR 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY+ LP + R E G+MR R F DA+ F + + + + + Sbjct: 349 SYKELPIRMAEFGACHRYEPSGSLHGLMRVRGFTQDDAHIFCREDQIVEETTKFITLC-R 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ LG+++ + + P S EF D Sbjct: 408 QVHADLGMQAEHIALATRPEVRAGSDEF-----------------WDKAEAQMAEAARAA 450 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I E A YA D + D++ ++ G A + Sbjct: 451 GVEPVIAEGDGAFYAPKLDFI---VRDAIGRTWTCGTIQLDYVLPERLG--------AEY 499 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 DG + +G+ +I + G +P +AP ++ + I Sbjct: 500 VAEDGSRQRPVMLHRAILGSFERFIGIII---ENYGGKFPLWLAPIQVVVAPIT---SDA 553 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D +++ ++L VG V D E+I + L P+ +VG K +V +++ Sbjct: 554 NDYAQQVASKLRSVGLRVDTDLRNEKINYKIREHSLAKVPVIAVVGRKEAETGEVALRYL 613 Query: 422 LTGIREDMSLEEVINYASHR 441 + +S++ Sbjct: 614 GQEGQTVLSVDSAAEQLRTE 633 >gi|229096864|ref|ZP_04227833.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-29] gi|228686474|gb|EEL40383.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-29] Length = 639 Score = 249 bits (635), Expect = 7e-64, Method: Composition-based stats. Identities = 71/444 (15%), Positives = 154/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ ++L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGNELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TPE + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMGQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + I + V Sbjct: 501 DVKNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHV 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 ++ +L++ G + D E++G + A + P +++G + + + V ++ Sbjct: 556 QYANEVADKLAQAGVRIERDVRDEKLGYKIREAQMQKIPYVLVIGDREMENGFVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E ++L+ N + Sbjct: 616 EEKSEVVALDVFAASMEEEIKNRK 639 >gi|194333013|ref|YP_002014873.1| threonyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271] gi|238693296|sp|B4S3D2|SYT_PROA2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|194310831|gb|ACF45226.1| threonyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271] Length = 657 Score = 249 bits (635), Expect = 7e-64, Method: Composition-based stats. Identities = 77/450 (17%), Positives = 158/450 (35%), Gaps = 39/450 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++ I + RD +L L + + G+ WLP G + + + +REEQ Sbjct: 239 LKQHLAHIEEAKKRDHRKLGAELELFM-LSPEVGSGLPIWLPKGAIVRNELESFLREEQR 297 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEML---RLADRNDKA--MIYGPTHEEVMTDI 117 + G + + P + + L+ SG Y Y + D + + P + I Sbjct: 298 KRGYVPVYTPHIGNIGLYKRSGHYPYYSESQFPPLTYTDDLGREEQYLLKPMNCPHHHMI 357 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 + S ++SYR+LP + +R E G++R+R F D++ + + Sbjct: 358 YSSKLRSYRDLPIRLTEFGTVYRHEQSGELNGLIRARGFTQDDSHIYCRPDQLVDE-ICN 416 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSE 235 +F LG I +R D + +K+ + Sbjct: 417 AIDLTKFVFATLGFDDIQIRLSLH--------------DPENQDKYGGTKEVWEQAEKDV 462 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 D + + Y D + D++ ++ ++ Sbjct: 463 REAADRMNIDYFTGIGEASFYGPKIDFI---VRDAIGRKWQLGTVQVDYVMP-------- 511 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 ++ G+DG+ H + I + G +P +AP +I+++ I Sbjct: 512 ERFDLSYIGSDGQPHRPVIIHRAPFGSMER--FIGVLIEHTGGNFPLWLAPVQIAVLPIT 569 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 D ++ L G V D E+IG + +++ P VI+G K + + Sbjct: 570 ---DEVHDYAVQVRDTLHAAGMRVELDTRSEKIGKKIRESEVAKIPYMVIIGQKEAAAGE 626 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V ++ G + +M++EE+ + ++ Sbjct: 627 VSLRRHREGDQGNMTVEELKEKLAKEINDK 656 >gi|228997455|ref|ZP_04157073.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock3-17] gi|229005099|ref|ZP_04162823.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock1-4] gi|228756201|gb|EEM05522.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock1-4] gi|228762288|gb|EEM11216.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock3-17] Length = 641 Score = 249 bits (635), Expect = 7e-64, Method: Composition-based stats. Identities = 80/443 (18%), Positives = 153/443 (34%), Gaps = 42/443 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + R+ ++L L M + + G+ +LP GQ + + + +RE Q Sbjct: 235 YLHFVEEAAKRNHRKLGNELELF--MFSEEAPGMPFYLPKGQIVRNELESFLREIQQNYD 292 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW ESG +D Y M ++ ++K+ P + IF++ + SY Sbjct: 293 YQEVRTPIMMNQGLWEESGHWDHYKDNM-YFSEVDNKSFALKPMNCPGHMLIFKNKLHSY 351 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R E G++R R F DA+ +TPE + + + Sbjct: 352 RDLPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIESEIKSVLKQIDYV 410 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + + P E A+ S + Sbjct: 411 YRTFGFEYE-VELSTRPEDSMGDDELWNQAEL-----------------SLENVLKSLNY 452 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H + D+L + + ++ F K+ + Sbjct: 453 NYRVNEGDGAFYGPKIDFH---IKDALQRSHQCGTVQLD----FQMPEKFD----LNYID 501 Query: 305 ADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + + R + +IE + + I +QV Sbjct: 502 ERNEKRRPVVIHRAVLGSFDRFLGILIEHFGGAFPTWLAP------VQIKVIPVSNQVHE 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 ++I +L VG D E++G + A L P +++G K + + V ++ Sbjct: 556 QYTKEIEEKLKSVGLRAERDARSEKLGYKIREAQLQKIPYILVIGDKEMENGSVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 E +SL + N Sbjct: 616 EEKSEVVSLSAFMESIRKEVYNK 638 >gi|237746898|ref|ZP_04577378.1| prolyl-tRNA synthetase [Oxalobacter formigenes HOxBLS] gi|229378249|gb|EEO28340.1| prolyl-tRNA synthetase [Oxalobacter formigenes HOxBLS] Length = 578 Score = 249 bits (635), Expect = 7e-64, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G + + + IIREE Sbjct: 1 MRASQFFISTLKEAPADAEIISHKLMVRAGMIRRLGSGIYAYMPMGLRVIHKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW E+GR+ YG E+LR+ DR+D+ I PT EEV+TDI R+ Sbjct: 61 MNRAGAVELLMPLVQPAELWQETGRWQKYGPELLRVKDRHDRDFIIQPTSEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD G K SY MF + Sbjct: 121 VIKSYRQLPINFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDVAGLKKSYQVMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y++IF R GLK P+ A++G IGG SHEF V+ADTGE + D+ E Sbjct: 181 YIKIFTRFGLKFRPVAADNGAIGGSGSHEFHVIADTGEDALVY-SRDSDYAANME 234 Score = 176 bits (446), Expect = 7e-42, Method: Composition-based stats. Identities = 79/292 (27%), Positives = 131/292 (44%), Gaps = 29/292 (9%) Query: 156 LMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 K+ F E Y YL I + A+ +FI A+ Sbjct: 312 TQKNIGEFRFASESEIVHYLGCPSGYLGPVGLSERTDIALYADHAVTVMS---DFICGAN 368 Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 + D P+P + +D N D P+ K Sbjct: 369 EKDMHYTGVNWERDVPLP-----------------------STVADFRNVVEGDPSPDGK 405 Query: 276 --RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 RGIEVGH+F GT+YS M AT+ +GK +QMG YGIG R++ A IE ++ Sbjct: 406 GTLAIQRGIEVGHVFQLGTRYSEDMHATYLDENGKPQLMQMGCYGIGVTRIMGAAIEQNN 465 Query: 334 DGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 D +GIIWP S+APF++ L + ++ R+ +K+Y L G DV DD GE+ G F Sbjct: 466 DERGIIWPVSIAPFEVVLCPLGYDRSEMVRNTADKLYGTLKNAGLDVLMDDRGERPGVMF 525 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 + +L+G P ++++G + + + K+E + R ++++++ N+ + ++ Sbjct: 526 SDWELIGIPHRIVIGERGLKEGKLEYQGRRDKEATAVAIDDMANFIKDKLAS 577 >gi|328951014|ref|YP_004368349.1| threonyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884] gi|328451338|gb|AEB12239.1| threonyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884] Length = 647 Score = 249 bits (635), Expect = 8e-64, Method: Composition-based stats. Identities = 86/443 (19%), Positives = 160/443 (36%), Gaps = 37/443 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y + + RD +L L +I KG+ WLP G + + +REEQ R Sbjct: 238 YLWQLEEAKKRDHRKLGRELELF--LIDPMVGKGLPLWLPKGNTVRELLVQFMREEQLRR 295 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G ++ P + S +L+ SG Y Y + D+A + P + I+ + +S Sbjct: 296 GYQLVTTPHVGSLELYKTSGHYPYYADSQFPPIELEDEAYLLKPMNCPHHIRIYAARPRS 355 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + +R E G+ R R F DA+ F TPE K + + + Sbjct: 356 YRELPLRLAEFGTVYRFEQSGELHGLTRVRGFTQDDAHIFC-TPEQVKEEFLSVLDLTMH 414 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 +F LG+++ R I + D + +++ Sbjct: 415 VFRTLGMENYRAR--------------IGVRDPSSDKYVGEDAKWALAERQIQEACEEVG 460 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 ++ A Y D + D+L ++ ++ T+ Sbjct: 461 LAYTVEAGDAAFYGPKLDF---VVRDALGREWQLGTIQVDYNLP--------ERFDLTYV 509 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG+ H + G++ ++ + +P +AP ++ ++ I Sbjct: 510 GPDGEPHRPVMIHRAPFGSLERFIGILI---EHFAGEFPLWLAPVQVVVVPITDRH---L 563 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 ++ L + G V D E++ ++ A+ P+ ++VG + V+ V ++ R Sbjct: 564 AYAREVAQALREAGIRVEVDTRSERMNAKIRDAETQKVPVILVVGDQEVAQRTVAVRDRR 623 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 T R LE V+ R Sbjct: 624 TKERATRPLEAVVQDLVARVQAR 646 >gi|119504253|ref|ZP_01626333.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2080] gi|119459761|gb|EAW40856.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2080] Length = 569 Score = 249 bits (635), Expect = 8e-64, Method: Composition-based stats. Identities = 129/303 (42%), Positives = 183/303 (60%), Gaps = 4/303 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L L+E P DAEI SH+LMLR G+I + + GIY+W+PLG + + V ++REE Sbjct: 1 MRASQFLLSTLKETPADAEIISHQLMLRAGLIRRVAAGIYNWMPLGLRVIRRVEKVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+S+P +Q A+LW+ESGR++ YG E+ RL DR+++ GPTHEE++T + RS Sbjct: 61 MCRAGALEISMPVVQPAELWLESGRWEQYGPELARLQDRHNRDFCLGPTHEEIITALGRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP F+QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + +Y +M + Sbjct: 121 EIKSYKQLPLNFFQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHADQVSLEQTYWRMHEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y IF RLGL + A++G IGG SHEF VLAD+GE + S D+ E Sbjct: 181 YTAIFTRLGLNFRSVEADTGSIGGSHSHEFHVLADSGEDAIAFSDS-SDYAANVELAPAL 239 Query: 240 --DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 S + + ++ P T D E+ ++ + + E I + Sbjct: 240 VTPATASEITDLIEFATPRVKTIDDLVEQAGITITDTVKTLFVNGENDEIVALVLRGDHR 299 Query: 298 MSA 300 ++A Sbjct: 300 LNA 302 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 67/192 (34%), Positives = 107/192 (55%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P T+D+ D+ + RGIEVGHIF GTKYS M A +GK + Sbjct: 376 PLIETADIREVIAGDASPCGQGALEIRRGIEVGHIFQLGTKYSEAMKAVVLNDEGKSVPM 435 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYAR 371 MG YGIG R+VAA IE +HD +GIIWPD++APF+++L+ + + A E +Y + Sbjct: 436 AMGCYGIGVTRIVAAAIEQNHDDQGIIWPDAMAPFEVALVPLNMDKSEAVATATEALYEQ 495 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L +G +VF DD E+ G +FA +L+G P++V +G + +++ +E++ R + ++ + + Sbjct: 496 LLTMGVEVFMDDRKERPGVKFAQMELIGIPVRVTLGDRSLAEGNIELQERTSDQKQLIPV 555 Query: 432 EEVINYASHRFS 443 E Sbjct: 556 SEASKAIVAMIR 567 >gi|167465772|ref|ZP_02330861.1| threonine-tRNA ligase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 419 Score = 249 bits (635), Expect = 8e-64, Method: Composition-based stats. Identities = 72/442 (16%), Positives = 161/442 (36%), Gaps = 35/442 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD L + + + +G+ WLP G + I + + + G Sbjct: 4 LHLLEEAKKRDHRKLGKDLKIFS-FSREVGQGLPLWLPNGATIRRTLERYIVDLEEKLGY 62 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L + DL+ SG ++ Y ++M +++ ++ P + ++++ + SYR Sbjct: 63 QHVYTPVLANVDLYKTSGHWEHYREDMFPPMQLDNEELVLRPMNCPHHMMVYKNELHSYR 122 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ R E+ G+ R R + DA+ F P+ K + ++ +++ Sbjct: 123 DLPIRIAELGTMHRYEMSGALTGLHRVRAMTLNDAHIFCR-PDQIKEEFARVITLIRQVY 181 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSENTDFDDIIS 244 G+ R D +T + + + + +++ Sbjct: 182 ADFGITDYRFRLS--------------YRDPQDTDKYFPNDEMWEMSQRMLKEVVEELRL 227 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ +L + + +S ++ F ++ + G Sbjct: 228 PYYEAEGEAAFYGPKLDV---QIKTALKKEETLSTAQLD----FLLPERF----ELEYVG 276 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H + G + + + + P + P + ++ + D Sbjct: 277 EDGQKHRPVVIHR--GIVSTMERMTAFLLENFAGALPTWLCPVQAKILPV---SSAFNDY 331 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ RL + G V D E++G + + L P ++VG ++ R G Sbjct: 332 AKEMEDRLKQAGIRVAADLRNEKLGYKIRESQLEKVPFMLVVGENEKQSGSFSVRRRGEG 391 Query: 425 IREDMSLEEVINYASHRFSNNR 446 S + +I + Sbjct: 392 DLGVHSADALIQMIREEIDTKK 413 >gi|120554655|ref|YP_959006.1| prolyl-tRNA synthetase [Marinobacter aquaeolei VT8] gi|152112927|sp|A1U1F0|SYP_MARAV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|120324504|gb|ABM18819.1| prolyl-tRNA synthetase [Marinobacter aquaeolei VT8] Length = 577 Score = 249 bits (635), Expect = 8e-64, Method: Composition-based stats. Identities = 125/237 (52%), Positives = 163/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y + +E P DAEI SH+LMLR GMI + + G+Y+WLPLG + L V I+REE Sbjct: 1 MRASRYLIATQKETPSDAEIISHQLMLRAGMIRKLAAGLYTWLPLGLRTLRKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +++GA E+ +P +Q A+LW ESGR++ YG E+LRL DR+ + +GPTHEEV+TD+ R+ Sbjct: 61 MDKSGAQEVLMPAVQPAELWQESGRWEQYGGELLRLNDRHGRDFCFGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE RPRFGVMR+REF+MKDAYSF L E +Y M + Sbjct: 121 ELKSYKELPANFYQIQTKFRDERRPRFGVMRAREFIMKDAYSFHLNAESLDETYKVMHQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF RLGL P++A+SG IGG SHEF VLA +GE + S D+ E Sbjct: 181 YCNIFDRLGLDYRPVQADSGSIGGSSSHEFHVLASSGEDAIVFSTSG-DYAANIEKA 236 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 110/193 (56%), Gaps = 3/193 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A + D+ N D+ P+ RGIEVGHIF G KYS M+A+ GK Sbjct: 378 GRDAEISRVEDLRNVVEGDASPDGNGTLEIRRGIEVGHIFKLGNKYSKAMNASVLDEHGK 437 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 ++MG YGIG R+VAA IE +HD KGIIWPD++APF+++++ + V +A +K Sbjct: 438 TSIMEMGCYGIGVSRIVAASIEQNHDEKGIIWPDAIAPFEVAIVTLNGHKSPVVAEAGDK 497 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +Y +L + G DV DD E+ G +FA +L+G P + +V + +S +E K R ++ Sbjct: 498 LYEQLRQAGYDVLLDDRNERPGVKFADIELIGIPHRFVVSERGLSAGTLEYKGRRDEEKQ 557 Query: 428 DMSLEEVINYASH 440 D+ ++E +++ Sbjct: 558 DIPVDEALSFLVK 570 >gi|262067494|ref|ZP_06027106.1| threonine--tRNA ligase [Fusobacterium periodonticum ATCC 33693] gi|291378856|gb|EFE86374.1| threonine--tRNA ligase [Fusobacterium periodonticum ATCC 33693] Length = 637 Score = 249 bits (635), Expect = 9e-64, Method: Composition-based stats. Identities = 82/443 (18%), Positives = 165/443 (37%), Gaps = 41/443 (9%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R K+ + + RD +L L I ++ G +LP G + + + R+E Sbjct: 226 RLKKHLKFMEEAEKRDHRKLGKELELF--FISEYGPGFPFFLPKGMVFRNVLIDLWRKEH 283 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G +++ P + + +LW SG + +Y + M ++ ++ P + F+ Sbjct: 284 EKAGYLQLETPIMLNKELWEISGHWFNYRENMYT-SEIDELEFAIKPMNCPGGVLSFKHQ 342 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP ++ R E G+MR R F D++ F +TP+ + + Sbjct: 343 LHSYKDLPARLAELGKVHRHEFSGALHGLMRVRSFTQDDSHIF-MTPDQVQDEIIGVVNL 401 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + + +L + + P S E D + D Sbjct: 402 IDKFYSKLFGFEYEIELSTKPEKAIGSQE-----------------IWDMAESALAGALD 444 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I A Y D K+ D++ + ++ F ++ Sbjct: 445 KLGRKYKINPGDGAFYGPKLDF---KIKDAIGRMWQCGTIQLD----FNLPERFD----V 493 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 T+ G DG+ H + G++ ++ + G +W V ++L + Sbjct: 494 TYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFPMWLAPVQVKVLTL------ND 547 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEI 418 C ++I +L ++G DD E IG + A+ P+Q+I+G V + +V I Sbjct: 548 ECIPYAKEIMDKLQELGIRAELDDRNETIGYKIREANGKYKIPMQLIIGKNEVENKEVNI 607 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + + SL+E +Y Sbjct: 608 RRFGSKDQFPKSLDEFYDYVVDE 630 >gi|148235110|ref|NP_001079554.1| prolyl-tRNA synthetase 2, mitochondrial (putative) [Xenopus laevis] gi|28278090|gb|AAH44273.1| MGC53152 protein [Xenopus laevis] Length = 466 Score = 249 bits (635), Expect = 9e-64, Method: Composition-based stats. Identities = 138/455 (30%), Positives = 222/455 (48%), Gaps = 44/455 (9%) Query: 3 RSKYFLPI---------LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNV 53 S+ + P + P + S KLM++ G+I + G + +LP +A++ + Sbjct: 33 LSRLYQPRSLWEVKSSETESKPNEPTSKSQKLMIKAGLIRPSNPGCFHYLPYTVRAMEKL 92 Query: 54 NAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEV 113 +I +E G ++ +PTL SA LW +SGR+D GKE+ RL DR+++ GPTHEE+ Sbjct: 93 IRLIDKEMQDIGGQKIDMPTLGSAALWRQSGRWDLMGKELFRLKDRHNQEYCLGPTHEEL 152 Query: 114 MTDIFRSH-IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKH 172 +T + S + + LP YQI KFRDE RP FG++R REF MKD Y+FD++ E + Sbjct: 153 VTHLVASEGGINNKELPLLLYQITRKFRDEQRPCFGLLRGREFYMKDMYTFDISEESAYE 212 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 +Y + +Y IF LG+ + ++A++G IGG +SHEF + A+ GE ++ DF Sbjct: 213 TYRNVCDAYSNIFRALGVHFVKVQADTGNIGGKMSHEFHLPANIGEDRLLVCGSC-DFSA 271 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 E D+ + + +GIE+GH FY GT Sbjct: 272 NVELLLHDEK-------------------------NCPVCTGQLKETKGIEIGHTFYLGT 306 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 KYS A + +MG YGIG R++AA +E + I WP +AP+++ LI Sbjct: 307 KYSHVFKANCYDSQKTPFLAEMGCYGIGVSRLLAASLEVLSNEDDIHWPGLIAPYQVCLI 366 Query: 353 NIKAHDQVCRD--ACEKIYARLSKV--GCD--VFWDDMG-EQIGSQFAVADLLGFPLQVI 405 + K + E +Y + + G DD IG + A ++G+P ++ Sbjct: 367 SPKKGSKEIEAISVAETLYDDIIQSVCGLRDETVLDDRSYLTIGKRVKEAHMMGYPYVIV 426 Query: 406 VGSKFVSDSKV-EIKHRLTGIREDMSLEEVINYAS 439 +G K + + E++ T +S E VI++ Sbjct: 427 IGKKALETPSLFEVRSHNTDEVHFLSREGVIDFLR 461 >gi|182684576|ref|YP_001836323.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CGSP14] gi|182629910|gb|ACB90858.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CGSP14] Length = 660 Score = 249 bits (635), Expect = 9e-64, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 156/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I ++ Sbjct: 242 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVNKEL 299 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 300 VSGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 359 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 360 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 419 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 420 IDVYEDFNLTDYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 466 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 467 MGVDYFEAEGEAAFYGPKLDI---QIKTALGKEETLSTIQLD----FLLPERFD----LK 515 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG+DH M G+ + I + + + I ++ Sbjct: 516 YIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 571 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 572 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 631 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +S++ + +N Sbjct: 632 GQKETQTVSVDNFVQAILADIANK 655 >gi|119476901|ref|ZP_01617182.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2143] gi|119449708|gb|EAW30945.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2143] Length = 576 Score = 249 bits (635), Expect = 9e-64, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ + ++E P DA + SH+LMLR GMI + S G+YSWLP+G + L V AI+REE Sbjct: 1 MRASQFLIATVKETPSDAVVISHQLMLRAGMIRKLSSGLYSWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P +Q ++LW ESGR+ YG E+LR+ DR++ + GPTHEEV+TD+ R+ Sbjct: 61 MNKAGAQELLMPVVQPSNLWQESGRWQQYGPELLRITDRHNNSFCLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF E + +Y M + Sbjct: 121 EIKSYKQLPLNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHNDQESLQQTYELMHAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF RLGL+ P+ A++G IGG+ SHEF VLAD+GE + S DF E Sbjct: 181 YTKIFTRLGLRFRPVVADTGSIGGNASHEFHVLADSGEDDIAFSDS-SDFAANVE 234 Score = 170 bits (431), Expect = 4e-40, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 109/196 (55%), Gaps = 3/196 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGK 308 D+ + D P+ K + RGIEVGHIF G KY+ + AT +GK Sbjct: 379 GRDCKTGRIEDIRDVVAGDPSPDGKGILHIKRGIEVGHIFQLGAKYAEALKATVLNENGK 438 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEK 367 D + MG YGIG R+VAA IE ++D KGIIWP S+APF+I++I + + K Sbjct: 439 DQTILMGCYGIGMTRIVAAAIEQNNDEKGIIWPASIAPFQIAIIPLNMQKSVDVAEQSNK 498 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +Y +LS++G +V DD E+ G +FA +L+G P ++++G + + D K+E K R + Sbjct: 499 LYQQLSELGYEVLLDDRNERPGVKFADMELIGIPHRIVIGDRGLKDGKMEYKGRQDSENQ 558 Query: 428 DMSLEEVINYASHRFS 443 + + +I++ + + Sbjct: 559 HIDISNIIDFIATSIA 574 >gi|300778181|ref|ZP_07088039.1| threonine--tRNA ligase [Chryseobacterium gleum ATCC 35910] gi|300503691|gb|EFK34831.1| threonine--tRNA ligase [Chryseobacterium gleum ATCC 35910] Length = 639 Score = 249 bits (635), Expect = 9e-64, Method: Composition-based stats. Identities = 80/444 (18%), Positives = 155/444 (34%), Gaps = 38/444 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD +L + + G+ WLP G + + + Q Sbjct: 226 LTEYLERLEEAKRRDHRKLGKELGIFA-FSEKVGAGLPLWLPKGTALRRKLENFLSDAQK 284 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRS 120 + G + P + + +L+V SG +D YG++ + + + P + +I+++ Sbjct: 285 KGGYEFVMSPHIGAKELYVTSGHWDKYGEDSFQPIKTPNEGEEFLLKPMNCPHHCEIYKT 344 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 SYR+LP + + +R E G+ R R F DA+ F TP+ + K+ Sbjct: 345 SQWSYRDLPKRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFC-TPDQLSEEFEKVID 403 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L +F LG + + D Q + D S + Sbjct: 404 LTLYVFKSLGFEDFVTQVSLR--------------DPENKQKYIGSDENWEKAESAIINA 449 Query: 240 DDIISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + L +++E A Y D + D+L ++ ++ Sbjct: 450 AEKKGLKTVIEYGEAAFYGPKLDFM---VKDALGRKWQLGTIQVDYNLP--------ERF 498 Query: 299 SATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + G+D + H + G+M A++ + G +W I Sbjct: 499 DLHYIGSDNEKHRPVMIHRAPFGSMERFIAILLENTAGDFPLW------LSPDQFIILPI 552 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + D +K+ L DD E+ G + A+L P ++VG + + Sbjct: 553 SEKYVDYSKKVSQFLENHDISGQIDDRNEKTGKKIRDAELKKIPFMLVVGENEEKEGTIS 612 Query: 418 IKHRLTGIREDMSLEEVINYASHR 441 ++ R G M LE+ + Y Sbjct: 613 VRRRGEGDLGVMKLEDFVAYFKKE 636 >gi|260424668|ref|ZP_05732876.2| threonine--tRNA ligase [Dialister invisus DSM 15470] gi|260402758|gb|EEW96305.1| threonine--tRNA ligase [Dialister invisus DSM 15470] Length = 647 Score = 248 bits (634), Expect = 9e-64, Method: Composition-based stats. Identities = 75/443 (16%), Positives = 143/443 (32%), Gaps = 41/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 ++ + RD +L L + H+ G + P G + + A RE Sbjct: 242 RFLFVRAEAEKRDHRKLGKQLNLFS--FHEEGPGFPFFHPKGMVIRNELIAYERELFREF 299 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + S LW++SG +D Y + M +++ P + ++++ S Sbjct: 300 GYEEIMTPIILSKKLWLQSGHWDHYKENM-YFTQIDEEDYAVKPMNCPGGILYYKTNQHS 358 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + + R EL G+ R R F DA+ F + Y + Sbjct: 359 YRELPKRVGEFGIVHRHELHGALHGLFRVRVFTQDDAHIFMTQDQMKDEVIK-TMEMYRK 417 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ GL+ + + P S E + + + Sbjct: 418 LYSVFGLEYH-VELSTRPENSMGSEE-----------------LWEISTNALRDAVEAAG 459 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E A Y D H K R + G I + + Sbjct: 460 VPYVINEGDGAFYGPKLDFHI----------KDCLGRTWQCGTI-QMDMQLPERFDVNYV 508 Query: 304 GADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG+ H V + G G++ ++ G W + + + Sbjct: 509 GEDGEKHRAVMLHRAGYGSLERFIGILIEHFAGAFPSW------IAPVQVKVVPVTEKHM 562 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + + LS V ++ + +G + A + P ++VG K ++ V ++ R Sbjct: 563 NYARSVADALSASNVRVEIEEGNDTLGYKIRKAQMEKVPYTLVVGDKEMNGHTVSVRSRK 622 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 G + + ++ + Sbjct: 623 NGDEGSLPVAVFVSNLIREIRDR 645 >gi|89093619|ref|ZP_01166566.1| prolyl-tRNA synthetase [Oceanospirillum sp. MED92] gi|89082015|gb|EAR61240.1| prolyl-tRNA synthetase [Oceanospirillum sp. MED92] Length = 574 Score = 248 bits (634), Expect = 9e-64, Method: Composition-based stats. Identities = 128/279 (45%), Positives = 177/279 (63%), Gaps = 3/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y + ++E P DAE+ SH+LMLR G+I + + G+Y+WLPLG + L V I+REE Sbjct: 1 MRTSQYLISTVKETPSDAEVISHQLMLRAGLIRKVASGLYNWLPLGLRTLRKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +++GA+E+ +P +Q A+LW ESGR++ YG E+LR+ DR+++ GPTHEEV+TD+ R Sbjct: 61 MDKSGAMEVLMPAVQPAELWEESGRWEQYGPELLRVNDRHNREFCVGPTHEEVITDLIRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + + +Y+ M + Sbjct: 121 EIKSYKQLPANFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHVGQDSLQETYDVMHQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE--NTD 238 Y IF RLGL P+ A++G IGG SHEF VLAD+GE + + D+ E Sbjct: 181 YTNIFTRLGLDFRPVLADTGSIGGATSHEFHVLADSGEDDIAF-SNVSDYAANVELAEAM 239 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV 277 + VE T + SLP K + Sbjct: 240 APEGDLAAPTVEMTTVDTPDAKTIDELVAQFSLPIEKTI 278 Score = 166 bits (420), Expect = 7e-39, Method: Composition-based stats. Identities = 67/198 (33%), Positives = 102/198 (51%), Gaps = 5/198 (2%) Query: 251 QWTAPYAATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + +D+ N D E RGIEVGHIF G KYS + A +GK Sbjct: 376 ERDVALPEVADIRNVVEGDPSPCGEGTLEIKRGIEVGHIFQLGQKYSEALKAEVLDQNGK 435 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI-KAHDQVCRDACEK 367 + MG YGIG RV+AA IE +HD GIIWP+++APF I+LI + ++ ++ Sbjct: 436 SVVMNMGCYGIGVTRVIAAAIEQNHDDGGIIWPEAIAPFHIALIPLQYDKSAEVKELTDR 495 Query: 368 IYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +Y L + G DV DD + G +FA DL+G P +V++ + +E K R Sbjct: 496 LYQELQQAGYDVIVDDRDKKTSPGVKFADMDLMGIPHRVVISPRGNEAGTLEYKGRRDDE 555 Query: 426 REDMSLEEVINYASHRFS 443 ++D+ ++EV+ + R + Sbjct: 556 KQDVQIDEVLPLLAERIN 573 >gi|302035784|ref|YP_003796106.1| threonyl-tRNA synthetase [Candidatus Nitrospira defluvii] gi|300603848|emb|CBK40180.1| Threonyl-tRNA synthetase [Candidatus Nitrospira defluvii] Length = 651 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 81/433 (18%), Positives = 144/433 (33%), Gaps = 41/433 (9%) Query: 11 LQENPR-DAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 L+E R D +L L T I + G+ W P G + RE+ + G Sbjct: 239 LEEIKRRDHRKLGKELDLIT--IQDEIGPGLVLWHPKGSLIRLLIENFWREQHIKDGYDL 296 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 + P + DLW SG D Y + M P + I++SH++SYR+L Sbjct: 297 VYSPHVARLDLWKTSGHVDYYRENMFASMKLEGSEYQLKPMNCPFHIMIYKSHMRSYRDL 356 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P + ++ +R E G++R R F DA+ F P+ + +++ + Sbjct: 357 PIRYGELGTVYRYERTGVLHGLLRVRGFTQDDAHLFCR-PDQIEAEVSRVLDFTFFVLGT 415 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 G + + P S E + Sbjct: 416 FGFTEFEVYLSTRPDKSVGSEENWT-----------------IATNALEAALKSRGVAYE 458 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 + Y D+ K+ D L + + S ++ + + G DG Sbjct: 459 VDPGEGVFYGPKIDI---KIKDVLGRSWQCSTVQVDFNNP--------ERFKLAYTGEDG 507 Query: 308 KDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 K H + +G++ ++ + G W V +++ ++ Sbjct: 508 KAHQPIMIHRALMGSIERFFGILIEHYAGAFPTWLAPVQAVVLTIT------DNQQEFAA 561 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 KI + L G V D E+IG + A+ P ++VG K V V ++ R Sbjct: 562 KIVSTLKSHGFRVEADLRNEKIGFKIREAEKNKIPYMLVVGDKEVQSGMVAVRGRSGANH 621 Query: 427 EDMSLEEVINYAS 439 M +E + Sbjct: 622 GSMPIEAFLELLR 634 >gi|25010739|ref|NP_735134.1| threonyl-tRNA synthetase [Streptococcus agalactiae NEM316] gi|77410759|ref|ZP_00787117.1| threonyl-tRNA synthetase [Streptococcus agalactiae CJB111] gi|73919827|sp|Q8E693|SYT_STRA3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|23095093|emb|CAD46328.1| theronyl-tRNA synthetase [Streptococcus agalactiae NEM316] gi|77163138|gb|EAO74091.1| threonyl-tRNA synthetase [Streptococcus agalactiae CJB111] Length = 647 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 91/449 (20%), Positives = 164/449 (36%), Gaps = 38/449 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L +E RD +L L M++ + +G+ WLP G + I +++ Sbjct: 227 KAYLKRREEAKERDHRKLGKELDLF--MVNPEVGQGLPFWLPNGATIRRELERYIVDKEI 284 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P + S + + SG +D Y ++M D D + + P + ++++ H Sbjct: 285 ASGYQHVYTPPMASVEFYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNCPHHIEVYKHH 344 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP ++ + R E G+ R RE + DA+ F TPE K + K Sbjct: 345 VHSYRELPIRIAELGMMHRYEKSGALTGLQRVREMTLNDAHIFV-TPEQIKDEFLKALNL 403 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 I+ L R + D E + D Sbjct: 404 IAEIYEDFNLTDYRFRLS-----YRDPEDKHKYYDNDEM--------WENAQAMLKEAMD 450 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D E A Y D+ ++ +L + +S ++ F ++ Sbjct: 451 DFGLDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD----L 499 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GADG++H + GI M A++ ++ G W + I ++ Sbjct: 500 KYIGADGEEHRPIMIHRGGISTMERFTAILIETYKGAFPTWLA-----PQQVSVIPISNE 554 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L G DD E++ + A P Q+IVG K + + V ++ Sbjct: 555 AHIDYAWEVARVLKDRGIRAEVDDRNEKMQYKIRAAQTQKIPYQLIVGDKEMEEKAVNVR 614 Query: 420 HRLTGIREDMSLEEVINYASHRF-SNNRP 447 + E S+EE + +RP Sbjct: 615 RYGSKATETKSIEEFVESILADIARKSRP 643 >gi|282882529|ref|ZP_06291150.1| threonine--tRNA ligase [Peptoniphilus lacrimalis 315-B] gi|281297671|gb|EFA90146.1| threonine--tRNA ligase [Peptoniphilus lacrimalis 315-B] Length = 636 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 72/446 (16%), Positives = 149/446 (33%), Gaps = 41/446 (9%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + ++ + RD +L L + +H+ G + P G +N+ + + Sbjct: 226 KLDEFIEKREEAEKRDHRKLGRELDLFS--MHEEGPGFPFFHPNGMITRNNLLSWWKNVL 283 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G E+ P + + DLW SG +D Y + M + +++ P + T I+ + Sbjct: 284 QERGYGEILTPVILNEDLWHRSGHWDHYKENM-YFTEIDEEGYAVKPMNCPGSTLIYSTT 342 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SYR+LP + + L R EL G+ R R F DA+ + L + + + Sbjct: 343 PHSYRDLPLRYAEFGLVHRHELSGALHGLFRVRSFTQDDAHIYCLPNQIKSEVFE--IID 400 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + + + + P + + + Sbjct: 401 LANLLYDTFGFKYSVELSTRP-----------------DDYMGDLGSWNEAEKALKEALE 443 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +I E A Y D H E D++ + ++ F Sbjct: 444 EKGMPYTINEGDGAFYGPKIDYHLE---DAIGRTWQCGTIQLD----FQLPQ----NFEL 492 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 T+ DG + G++ ++ GK +W + I + Sbjct: 493 TYVAEDGSKKRPVMLHRALFGSVERFMGILIEHFAGKFPLW------LSPVQVEIIPVSE 546 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + +++ +L K G V D+ E++G + A L +++G K K+ ++ Sbjct: 547 KFKPYAGEVFDQLKKAGIRVKIDERAEKVGYKIREAQLKKVNYMLVIGEKETESHKLSVR 606 Query: 420 HRLTGIREDMSLEEVINYASHRFSNN 445 R +D+ + + I + Sbjct: 607 KRSGEEVKDVEVSKFIEDLKKEIESK 632 >gi|220934299|ref|YP_002513198.1| prolyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7] gi|254782924|sp|B8GPP4|SYP_THISH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|219995609|gb|ACL72211.1| prolyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7] Length = 574 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 122/235 (51%), Positives = 164/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +++ L L+E P DAE+ SH+LMLR GMI + + G+YSW PLG + L V ++R+E Sbjct: 1 MRATRFPLATLKETPADAEVISHQLMLRAGMIRRLASGLYSWTPLGLRVLRKVEGLVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR++ YG E+LRL DR+ + +GPTHEEV+TD R Sbjct: 61 MDRAGALELLMPAVQPAELWQESGRWEQYGPELLRLKDRHMREFCFGPTHEEVITDYVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP +YQIQ KFRDE+RPRFGVMR+REFLMKDAYSF + + K +Y +M + Sbjct: 121 EVKSYRQLPVNYYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHVDEDSLKETYARMHEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R GL + A++G IGG+ SHEF VLAD+GE + S D+ E Sbjct: 181 YTRIFTRCGLDFRAVLADTGSIGGNASHEFHVLADSGEDAIAFSD-VSDYAANVE 234 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 73/189 (38%), Positives = 109/189 (57%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + RGIEVGHIF G KYS M AT G+ V MG Sbjct: 383 PVADLRNVVAGDPSPDGQGSLQIRRGIEVGHIFQLGRKYSEAMGATVLDEQGRSLVVTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSK 374 YGIG RVVAA IE +HD +GIIWP+++APF ++L I A Q R+A + +Y RL Sbjct: 443 CYGIGVSRVVAAAIEQNHDAQGIIWPEALAPFTVALCPINAQKSQRLREAADALYERLLN 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +VF+DD G + G+ FA +L+G P ++++G + + ++E K R ++L+ V Sbjct: 503 AGFEVFYDDRGLRPGAMFADMELIGIPHRLVLGERGLDAGEIEYKGRRDTDTTQVALDGV 562 Query: 435 INYASHRFS 443 +++ R + Sbjct: 563 LDFLRQRMN 571 >gi|332184284|gb|AEE26538.1| Threonyl-tRNA synthetase [Francisella cf. novicida 3523] Length = 634 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 74/443 (16%), Positives = 142/443 (32%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD L L + S GI W G + V +R N+ G Sbjct: 230 YLNMLEEAEKRDHRKIGKVLDLF--HFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG Y + M ++ P + ++ + + SY Sbjct: 288 CSEIRTPLIADFSLWEKSGHASKYAENMF-ATKSENRDFAIRPMNCPTCVQVYNTKLHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F + + + + Sbjct: 347 RDLPIRMAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEV- 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++ P E D D Sbjct: 406 YKDFGFNDFAVKIALRPENRIGDDE-----------------TWDKSEQMLKNALDANNV 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ A Y + H L D++ + + ++ G AT+ Sbjct: 449 SYELLPGEGAFYGPKIEFH---LKDAIGRSWQCGTIQLDFSMPQRLG--------ATYID 497 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G V + +G++ ++ + G +W + + D Sbjct: 498 KNGDKQVPVMLHRAIVGSLERFIGMLIEHYAGNLPLW------LAPFQVAVMGISNNQDD 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C++++ L K G D E+IG + LL P VI+G + I+ Sbjct: 552 YCKEVFTMLEKNGIRTKLDLRNEKIGFKIREHTLLRVPYLVILGKNEQEQKIITIRKHSG 611 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 MS+++ + + + Sbjct: 612 EDLGQMSVDDFCAFLDKQIQAKK 634 >gi|56964462|ref|YP_176193.1| threonyl-tRNA synthetase [Bacillus clausii KSM-K16] gi|56910705|dbj|BAD65232.1| threonyl-tRNA synthetase [Bacillus clausii KSM-K16] Length = 643 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 74/439 (16%), Positives = 163/439 (37%), Gaps = 32/439 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L + + + +G+ WLP G + I +++ R G Sbjct: 235 LRLLEEAKERDHRKLGKELGIFA-LSPKVGQGLPLWLPKGATIRRIIERYIVDKEERLGY 293 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S++L+ SG +D Y +M + +++ ++ P + +++ ++SYR Sbjct: 294 QHVYTPILGSSELYKTSGHWDHYQDDMFPPMEMDNETLVLRPMNCPHHMMVYKQDMRSYR 353 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ + R E+ ++ + + P+ K + ++ ++ Sbjct: 354 QLPLRIAELGMMHRYEMSGAVSGLQRVRGMTLNDAHIFCRPDQIKEEFVRVVRLIQEVYK 413 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIISL 245 GL R D + + + D M + D + Sbjct: 414 DFGLNDYKFRLS--------------YRDPEDKEKYFDDDDMWNKAQAMLKEAMDTLGLP 459 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 A Y DV ++ +L + + +S ++ F ++ T+ G Sbjct: 460 YYEAIGEAAFYGPKLDV---QVKTALGKEETLSTVQLD----FLLPERFD----LTYVGE 508 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DGK H + G + + + + P +AP ++ +I + ++V D Sbjct: 509 DGKLHRPVVVHR--GVVSTMERFVAFLLEEYKGALPTWLAPVQVQVIPV--SNEVHLDYA 564 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +++ +L + G V DD E++G + A + P +++G K V+ V ++ Sbjct: 565 KRVIEQLQQAGVRVEIDDRDEKLGYKIREAQIQKIPYMLVLGDKEVAAEAVNVRKYGEQA 624 Query: 426 REDMSLEEVINYASHRFSN 444 L ++ Sbjct: 625 SSSQPLSVFVDEIGKEARK 643 >gi|301156314|emb|CBW15785.1| threonyl-tRNA synthetase [Haemophilus parainfluenzae T3T1] Length = 643 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 73/445 (16%), Positives = 143/445 (32%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LAEYLTRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + LW ++G + +Y +++ ++ P + IF + Sbjct: 287 EYDYQEVKGPFMMDRVLWEKTGHWQNY-GDLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G ++I ++ + P + D D Sbjct: 405 YDIYSTFGFQNIQVKLSTRPEKR-----------------IGADDMWDRAEAGLAAALAH 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y + L D L + ++ +A+ Sbjct: 448 NGLEYEIQEGEGAFYGPKIEF---ALRDCLDREWQCGTIQLDFALPGRL--------NAS 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ +I + G W V +++ Sbjct: 497 YVAEDNDRRTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPVQAVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ +LS G V D E++G + L P ++ G K +++ KV ++ Sbjct: 551 QADYVQKVVKQLSDAGLRVKADLRNEKVGFKIREHTLRRVPYMLVCGDKEIAEGKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R ++EE + Sbjct: 611 RKGADLGTFTIEEFAEILKSQVRQR 635 >gi|15459130|gb|AAL00276.1| Threonyl-tRNA synthetase 1 [Streptococcus pneumoniae R6] Length = 660 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 156/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I ++ Sbjct: 242 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVNKEL 299 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 300 VSGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 359 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 360 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 419 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 420 IDVYEDFNLTDYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 466 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 467 MGVDYFEAEGEAAFYGPKLDI---QIKTALGKEETLSTIQLD----FLLPERFD----LK 515 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG+DH M G+ + I + + + I ++ Sbjct: 516 YIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 571 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 572 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 631 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +S++ + +N Sbjct: 632 GQKETQTVSVDNFVQAILADIANK 655 >gi|121997498|ref|YP_001002285.1| prolyl-tRNA synthetase [Halorhodospira halophila SL1] gi|152112924|sp|A1WUX1|SYP_HALHL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|121588903|gb|ABM61483.1| prolyl-tRNA synthetase [Halorhodospira halophila SL1] Length = 568 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 130/276 (47%), Positives = 174/276 (63%), Gaps = 1/276 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +++ L +E P DAEI SH+LMLR GMI + S G+Y+WLPLG + L V I+REE Sbjct: 1 MRVTRFPLSTTRETPADAEIVSHQLMLRAGMIRRLSSGLYTWLPLGLRVLQKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW ESGR++ YG E+LR+ DR+D+ +GPTHEEV+TD+FR Sbjct: 61 MNRAGALEVLMPAVQPAELWQESGRWEKYGPELLRIRDRHDREGCFGPTHEEVITDLFRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR LP +YQIQ KFRDE+RPRFGVMR+REFLMKDAYSF L + + Y +M + Sbjct: 121 EIRSYRQLPVNYYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLDDDDLRAEYQRMHEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSENTDF 239 Y RIF R GL P+ A++G IGG +SHEF+VLAD+GE + C + Sbjct: 181 YCRIFQRTGLAFRPVEADTGAIGGSVSHEFMVLADSGEDAIAVCEASGYAANVELAPAVA 240 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 E+ + + LPE + Sbjct: 241 PTEPRPAPQAERAEVATPGQRTIAEVAAYLGLPEAR 276 Score = 173 bits (437), Expect = 8e-41, Method: Composition-based stats. Identities = 73/190 (38%), Positives = 105/190 (55%), Gaps = 2/190 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P T+D+ D P+ + RGIEVGHIF GT YS M A+ G++ V Sbjct: 378 PEPETADLREVTAGDPSPDGEGTLTLRRGIEVGHIFQLGTTYSEAMGASVLDEQGQERTV 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG RVVAA IE +HD +GI WP +APF+++L+ IKA D +A E +YA L Sbjct: 438 TMGCYGIGVSRVVAAAIEQNHDDRGICWPAPIAPFQVALVAIKAEDPAVAEAAEALYADL 497 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 + G DV +DD + G +FA +L+G P +V+V + + + VE K R + Sbjct: 498 TASGIDVLYDDRDARPGVKFADMELIGIPHRVVVSPRAIQEGSVEYKGRQDADPTHVPRA 557 Query: 433 EVINYASHRF 442 E++ + +R Sbjct: 558 EIVTWLKNRL 567 >gi|119946895|ref|YP_944575.1| prolyl-tRNA synthetase [Psychromonas ingrahamii 37] gi|152112944|sp|A1SZR1|SYP_PSYIN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|119865499|gb|ABM04976.1| prolyl-tRNA synthetase [Psychromonas ingrahamii 37] Length = 571 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 130/390 (33%), Positives = 188/390 (48%), Gaps = 21/390 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + Y L +E P DA I SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTNYLLSTQKEAPSDAVIVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVETIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G +E+ +P +Q ADLW+E+GR+D YG E+LR+ DR+ + + GPTHEEV+T++ R Sbjct: 61 MERAGGVEVLMPIVQPADLWLETGRWDQYGGELLRIKDRHTRDFVLGPTHEEVITELVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ KFRDE RPRFGVMR+REF MKDAYSF + + +Y KMF + Sbjct: 121 EVNSYKQLPLNLFQIQTKFRDETRPRFGVMRAREFTMKDAYSFHMDQACLEKTYQKMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN---- 236 Y RIF RLGL+ P+ A++G IGG SHEF VLA +GE + D+ E Sbjct: 181 YCRIFDRLGLEYRPVIADTGSIGGSASHEFHVLAQSGEDAIVF-STESDYAANIEKAEAL 239 Query: 237 -------TDFDDIISLNSI----VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 ++ L++ + + + + + + LF + + + Sbjct: 240 APSTVLAAPTAEMGLLDTPNAKTIAELVSKHGIAIEKTVKTLFVKASDQIETELIALIIR 299 Query: 286 HIFYFGTKYSLP-----MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 + F V G +G + + I + Sbjct: 300 GDHELNEIKAENLASVAAPLEFASESEIRALVNAGPGSLGPVSLPVPFIVDRSVAVMSDF 359 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYA 370 NI V E + Sbjct: 360 SAGANIDNKHYCNINWGRDVELAQVEDLRN 389 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 3/206 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPM 298 D +I A D+ N D ARGIEVGHIF G Y+ M Sbjct: 366 DNKHYCNINWGRDVELAQVEDLRNVVEGDPSPCGSGTLSMARGIEVGHIFQLGDTYTKAM 425 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 +A GK+ + MG YGIG R+VAA IE ++D GIIW +++APF + ++ + Sbjct: 426 NAGVLNQQGKNQILTMGCYGIGISRIVAAAIEQNNDKNGIIWNNTLAPFSVVIVPMNMHK 485 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + EK YA L G +V +DD E+ G FA A+L+G P +++G + + + +E Sbjct: 486 SHRVAELAEKYYAELQAAGIEVLFDDRKERPGIMFADAELMGIPHTLVIGDRSLDNGVIE 545 Query: 418 IKHRLTGIREDMSLEEVINYASHRFS 443 K RL+G++++++++EVIN+ + + Sbjct: 546 YKDRLSGVKQEVAIDEVINFIKAQLA 571 >gi|39996615|ref|NP_952566.1| threonyl-tRNA synthetase [Geobacter sulfurreducens PCA] gi|73919793|sp|Q74D04|SYT_GEOSL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|39983496|gb|AAR34889.1| threonyl-tRNA synthetase [Geobacter sulfurreducens PCA] Length = 636 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 84/440 (19%), Positives = 144/440 (32%), Gaps = 40/440 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + G W P G + R E + G Sbjct: 232 YLEKIEEAKRRDHRKLGRELDLFS-FSDDVGAGFVIWHPKGAMLRTLLEDFERREHLKRG 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +LW SG YD+Y + M + + P + I++S ++SY Sbjct: 291 YDIVVGPQILKTELWQRSGHYDNYRENM-YFTEVEGQGFGIKPMNCLSHMMIYKSQLRSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F+++ R E G++R R F DA+ TPE + + Sbjct: 350 RDLPLRFFELGTVHRHERAGVLHGLLRVRCFTQDDAHILC-TPEQLDAEIKGVISFVNDV 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G + P S E + + D Sbjct: 409 MGIFGFDYEM-ELSTRPEKSIGSDE-----------------DWERATGALLGALKDSGR 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ KL DSL + + + F ++ T+ Sbjct: 451 PYEINEGDGAFYGPKIDI---KLRDSLDRKWQCATIQCD----FTLPERFD----LTYVD 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ + +G++ V+ G +W V +++ + Sbjct: 500 ADGERKRPVMVHRVILGSIERFIGVLIEHFAGNFPLWLSPVQAIVLTVT------DNQQP 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ L G V D E++G + A L P +++G K V V + R Sbjct: 554 YAAQVFETLRTNGVRVQKDFRNEKLGFKIREAQLQKIPYMLVIGDKEVESGTVTPRFRDG 613 Query: 424 GIREDMSLEEVINYASHRFS 443 M EE + + + Sbjct: 614 SNLAAMKPEEFVAFVNDEVK 633 >gi|299135910|ref|ZP_07029094.1| threonyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8] gi|298602034|gb|EFI58188.1| threonyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8] Length = 680 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 88/437 (20%), Positives = 154/437 (35%), Gaps = 36/437 (8%) Query: 11 LQENP-RDAEIASHKLMLRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 L+E RD + +L L + I + + G+ W P G + +R E R G Sbjct: 270 LEEIKARDHRVLGKQLDLFS--IQEVAGAGLIFWHPKGGLIRKTMEDWMRAECVRRGYNL 327 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 + P + +LW SG Y M + +D P + I+++ KSYR+L Sbjct: 328 VVTPHIMRRELWKISGHEGYYSDNMYPPMELDDAEYRLKPMNCPGHILIYKNSPKSYRDL 387 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P + ++ +R E G++R R F DA+ F TP+ + + Sbjct: 388 PVRYAELGNVYRYERSGTMHGLLRVRGFTQDDAHIFC-TPDQIEDEVVACIEFAQSVLTT 446 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 G + + S D I S T Sbjct: 447 FGFADFKVELST-------------WDPKKPQDYTGSADHWATAINSLKTALGRKNIPFV 493 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 + A Y DV KL D L ++S + F ++ + G DG Sbjct: 494 EIPGEAAFYGPKIDV---KLVDVLGRLWQLSTVQFD----FNLPARF----ELEYIGEDG 542 Query: 308 KDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + H + G++ V+ + G +W +AP ++ L+ I ++ E Sbjct: 543 ERHRPVMVHRALFGSVERFFGVLIEHYAGAFPMW---LAPVQVGLVPI--SNEKHLAYAE 597 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + ARL G V D ++ ++ L FP +++G K + V ++ R G Sbjct: 598 SVKARLEAAGLRVELDGGNGKMNAKIRDFGLQKFPFILVLGDKEAASDSVSVRVRAKGDE 657 Query: 427 EDMSLEEVINYASHRFS 443 ++++E I A Sbjct: 658 GSVTVDEFIARAKKLVD 674 >gi|291486342|dbj|BAI87417.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195] Length = 638 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 146/442 (33%), Gaps = 44/442 (9%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L M + + G+ +LP GQ + + RE Q G Sbjct: 235 LHMLEEAAKRDHRKLGKQLGLF--MFSEEAPGMPFYLPKGQIVRNELERFSRELQTNAGY 292 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + + LW +SG +D Y M ++ +D P + IF++ + SYR Sbjct: 293 NEVRTPFMMNQRLWEQSGHWDHYRDNM-YFSEVDDTRFAMKPMNCPGHMLIFKNSLYSYR 351 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R E G++R R F DA+ F + + + Sbjct: 352 DLPIRMAEFGQVHRHEYSGALNGMLRVRTFCQDDAHIFVREDQIESEIKEAIRLI----- 406 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + E+ V T + + + +++ Sbjct: 407 --------------DEVYRTFGFEYSVELSTRPEDSLGNDSLWEASERALARVLEELGLS 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y D H + D+L + + + ++ F K+ T+ Sbjct: 453 YEINEGDGAFYGPKIDFH---IKDALKRSHQCATIQLD----FQMPEKFD----LTYINE 501 Query: 306 DGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + R +IE + V D Sbjct: 502 HNEKVRPVVIHRAVFGSIDRFFGILIEHYGGAFPVWLAPLQVQIIPV-------SHVHLD 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C K+ A L + G D+ E++G + + + P +++G ++ V ++ Sbjct: 555 YCRKVQAELKQAGIRAGIDERNEKLGYKIRESQVQKIPYVLVLGDHEEQENAVNVRRFGH 614 Query: 424 GIREDMSLEEVINYASHRFSNN 445 E + + + + N Sbjct: 615 QQSEHVPFQTFKDKLVKQVENR 636 >gi|188533062|ref|YP_001906859.1| prolyl-tRNA synthetase [Erwinia tasmaniensis Et1/99] gi|226701287|sp|B2VDZ9|SYP_ERWT9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|188028104|emb|CAO95961.1| Prolyl-tRNA synthetase [Erwinia tasmaniensis Et1/99] Length = 572 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 127/292 (43%), Positives = 176/292 (60%), Gaps = 20/292 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LRL DR+D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRLVDRSDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQGSLQETYDAMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y + F R+GL ++A++G IGG SHEF VLA +GE + D+ E + Sbjct: 181 YSQSFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDIVF-STGSDYAANIEMAEAL 239 Query: 240 ------------------DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + ++ +VEQ+T P T K Sbjct: 240 PPAGGRADATQERVQFATPEAKTIADLVEQFTLPIEKTVKTLMVKATKESGH 291 Score = 181 bits (460), Expect = 2e-43, Method: Composition-based stats. Identities = 67/192 (34%), Positives = 111/192 (57%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ K + RGIEVGHIF GTKYS M A+ +G DG++ + Sbjct: 380 PLPRIADIRNVVEGDASPDGKGTLLIKRGIEVGHIFQLGTKYSEAMKASVQGEDGRNQTL 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYAR 371 MG YGIG R+VAA IE +HD +GIIW ++APF+++++ + ++ E +Y + Sbjct: 440 TMGCYGIGITRIVAAAIEQNHDERGIIWSPALAPFQVAILPMNMQKSFRVKELAEALYQQ 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P +++G + + + ++E K R G + + Sbjct: 500 LRAKGIDVILDDRKERPGVMFADMELIGVPHTIVIGERNLDNDEIEYKARRGGEKRLIKT 559 Query: 432 EEVINYASHRFS 443 +E++++ + Sbjct: 560 DEIVDFLMAELA 571 >gi|320540052|ref|ZP_08039708.1| prolyl-tRNA synthetase [Serratia symbiotica str. Tucson] gi|320029901|gb|EFW11924.1| prolyl-tRNA synthetase [Serratia symbiotica str. Tucson] Length = 570 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+ENP DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKENPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N AIE+S+P +Q ADLW ESGR++ YG E+LR DR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNANAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFG+MRSREFLMKDAYSF + + + +Y+ M+ + Sbjct: 121 EISSYKQLPLNFFQIQTKFRDEVRPRFGIMRSREFLMKDAYSFHTSQDSLQVTYDAMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL P+ A++G IGG SHEF VLAD+GE + D+ E Sbjct: 181 YNKIFSRMGLDFRPVHADTGSIGGSASHEFQVLADSGEDDIVF-STGSDYAANIE 234 Score = 174 bits (441), Expect = 3e-41, Method: Composition-based stats. Identities = 73/192 (38%), Positives = 113/192 (58%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ + + RGIEVGHIF GTKYS M AT +G DG++ + Sbjct: 378 PLPQVADIRNVVEGDASPDGQGTLLIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRNQVL 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWPD++APF+++++ + H + E +Y Sbjct: 438 TMGCYGIGVTRVVAAAIEQNHDERGIIWPDTIAPFQVAILPMNMHKSFRVQALAEDLYTT 497 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P +++G + + ++E K+R G ++ + Sbjct: 498 LRSHGIDVLLDDRKERPGVMFADMELIGVPHTIVIGDRNLDSEEIEYKNRRIGEKQMIKT 557 Query: 432 EEVINYASHRFS 443 EE++N+ + Sbjct: 558 EEIVNFLLRQIK 569 >gi|318605898|emb|CBY27396.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica Y11] Length = 642 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 70/442 (15%), Positives = 141/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + R+ +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRNHRKIGKQLDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y + M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYAEHMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + N + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQVRDE-VNSCIKMVYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S + A+ + Sbjct: 408 YSTFGFEKIVVKLSTRPEKRIGSDDLWTRAED-----------------DLAAALTENGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ F + S A++ G Sbjct: 451 PFDYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----FSLPGRLS----ASYIG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+M ++ + G W V +++ D Sbjct: 500 ENNDRQVPVMIHRAILGSMERFIGILTEEYAGFFPTWLAPVQVVVMNIT------DSQSD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L G D E+IG + L P ++ G K V K+ ++ R Sbjct: 554 YVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + V++ + Sbjct: 614 KDLGSLDVNVVVDQLLAEIRSR 635 >gi|22536875|ref|NP_687726.1| threonyl-tRNA synthetase [Streptococcus agalactiae 2603V/R] gi|76787804|ref|YP_329459.1| threonyl-tRNA synthetase [Streptococcus agalactiae A909] gi|76799413|ref|ZP_00781564.1| threonyl-tRNA synthetase [Streptococcus agalactiae 18RS21] gi|77405954|ref|ZP_00783034.1| threonyl-tRNA synthetase [Streptococcus agalactiae H36B] gi|77413516|ref|ZP_00789706.1| threonyl-tRNA synthetase [Streptococcus agalactiae 515] gi|73919828|sp|Q8E0L9|SYT_STRA5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123771973|sp|Q3K1Z4|SYT_STRA1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|22533725|gb|AAM99598.1|AE014224_1 threonyl-tRNA synthetase [Streptococcus agalactiae 2603V/R] gi|76562861|gb|ABA45445.1| threonyl-tRNA synthetase [Streptococcus agalactiae A909] gi|76585236|gb|EAO61843.1| threonyl-tRNA synthetase [Streptococcus agalactiae 18RS21] gi|77160460|gb|EAO71581.1| threonyl-tRNA synthetase [Streptococcus agalactiae 515] gi|77175465|gb|EAO78254.1| threonyl-tRNA synthetase [Streptococcus agalactiae H36B] Length = 647 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 91/449 (20%), Positives = 164/449 (36%), Gaps = 38/449 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L +E RD +L L M++ + +G+ WLP G + I +++ Sbjct: 227 KAYLKRREEAKERDHRKLGKELDLF--MVNPEVGQGLPFWLPNGATIRRELERYIVDKEI 284 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P + S + + SG +D Y ++M D D + + P + ++++ H Sbjct: 285 ASGYQHVYTPPMASVEFYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNCPHHIEVYKHH 344 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP ++ + R E G+ R RE + DA+ F TPE K + K Sbjct: 345 VHSYRELPIRIAELGMMHRYEKSGALTGLQRVREMTLNDAHIFV-TPEQIKDEFLKALNL 403 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 I+ L R + D E + D Sbjct: 404 IAEIYEDFNLTDYRFRLS-----YRDPEDKHKYYDNDEM--------WENAQAMLKEAMD 450 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D E A Y D+ ++ +L + +S ++ F ++ Sbjct: 451 DFGLDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD----L 499 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GADG++H + GI M A++ ++ G W + I ++ Sbjct: 500 KYIGADGEEHRPIMIHRGGISTMERFTAILIETYKGAFPTWLA-----PQQVSVIPISNE 554 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L G DD E++ + A P Q+IVG K + + V ++ Sbjct: 555 AHIDYAWEVARVLKDRGIRAEVDDRNEKMQYKIRAAQTQKIPYQLIVGDKEMEEKAVNVR 614 Query: 420 HRLTGIREDMSLEEVINYASHRF-SNNRP 447 + E S+EE + +RP Sbjct: 615 RYGSKATETKSIEEFVESILADIARKSRP 643 >gi|182419627|ref|ZP_02950872.1| threonyl-tRNA synthetase [Clostridium butyricum 5521] gi|237665561|ref|ZP_04525549.1| threonine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376517|gb|EDT74094.1| threonyl-tRNA synthetase [Clostridium butyricum 5521] gi|237658508|gb|EEP56060.1| threonine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 636 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 83/441 (18%), Positives = 161/441 (36%), Gaps = 41/441 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L T + G +LP G +++ R+ G Sbjct: 233 LNNLEEAKKRDHRKLGKELKLFT--FAEEGPGFPFFLPKGVILKNSLIDFWRKIHYEAGY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 +E+ P + + LW SG + Y + M +D+ P + +++S SYR Sbjct: 291 VEVETPIMLNKKLWETSGHWYHYKENMYTSM-IDDEEFALKPMNCPGGMIVYKSDSHSYR 349 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 + P ++ R EL G+MR R F DA+ F L + + +++ Sbjct: 350 DFPMRVGELGRVHRHELSGALHGLMRVRAFTQDDAHIFMLPEQIKSE-IKGVVELIDKVY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G K + + P S E +A+ S D++ Sbjct: 409 SIFGFKYH-VELSTRPEDSMGSDEEWKMAED-----------------SLRGALDELNLQ 450 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y D H E DS+ + ++ F ++ + G+ Sbjct: 451 YVINEGDGAFYGPKIDFHLE---DSIGRTWQCGTIQLD----FQLPQRF----ELEYVGS 499 Query: 306 DGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D + H + G++ ++ GK W +AP ++ ++ I + Sbjct: 500 DNEKHRPIVIHRVIFGSIERFIGILIEHFAGKFPTW---LAPVQVKVLPISDK---FNNY 553 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 C+++ + ++ G V D E+IG + A P VI+G K + + ++ R G Sbjct: 554 CDEVVKQFNENGIRVEIDQRNEKIGYKIREARNERVPYIVIIGEKEEGEGNISLRSRKNG 613 Query: 425 IREDMSLEEVINYASHRFSNN 445 ++++++I ++ N Sbjct: 614 DEGSINVKDLIERINNEIKNK 634 >gi|241668765|ref|ZP_04756343.1| threonyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877296|ref|ZP_05250006.1| threonine-tRNA ligase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843317|gb|EET21731.1| threonine-tRNA ligase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 635 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 74/443 (16%), Positives = 142/443 (32%), Gaps = 41/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD L L + S GI W G + V +R + G Sbjct: 231 YLHMLEEAEKRDHRKIGKALDLF--HFQEDSPGIAFWHDSGVRIWREVEDYMRASNKKYG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG Y + M ++ P + ++ + + SY Sbjct: 289 CGEIRTPLIADFSLWEKSGHASKYAENMF-ATKSENRDFAIRPMNCPTCVQVYNTKLHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F D + F + + + + Sbjct: 348 RDLPIRMAEFGIVHRNEPSGSLHGLMRVRSFTQDDGHIFCAPEQVEEEVILMVKQCFEV- 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++ P + E D D Sbjct: 407 YKDFGFNDFTVKIALRPENRIGNDE-----------------TWDKSEQMLKNALDANNV 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ A Y + H L D++ + + ++ G AT+ Sbjct: 450 AYELLPGEGAFYGPKIEFH---LKDAIGRSWQCGTIQLDFSMPDRLG--------ATYID 498 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G V + +G++ ++ + G +W + + + Sbjct: 499 KNGNKQVPVMLHRAIVGSLERFIGMLIEHYAGNMPLW------LTPVQVAVMGISNHQDE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C+K++ L K G D E+IG + LL P VI+G V ++ Sbjct: 553 YCQKVFETLEKNGIRAKLDLRNEKIGFKIREHTLLRVPYLVILGKSEQEQEIVTVRKHNG 612 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 MS+ + + + + + Sbjct: 613 EDLGQMSIGDFCAFLNEQIEAKK 635 >gi|66044647|ref|YP_234488.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a] gi|81308436|sp|Q4ZWM2|SYP_PSEU2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|63255354|gb|AAY36450.1| Prolyl-tRNA synthetase, bacterial [Pseudomonas syringae pv. syringae B728a] Length = 571 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 118/237 (49%), Positives = 164/237 (69%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E + +Y++M ++ Sbjct: 121 ELNSYKQLPINMYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADHESLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF RLGLK P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSD-GSDYAANIEKA 236 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 112/207 (54%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ K RGIEVGHIF GTKYS M Sbjct: 364 DDKHYFGVNWERDLPVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGTKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK + MG YGIG RVVAA IE + D GIIW D++APF+I+L+ ++ Sbjct: 424 KCQVLGENGKPVNLAMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALVPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 R+A +K+YA L+ G +V DD + G +FA +L+G P +++V + +++ + Sbjct: 484 DAVREATDKLYADLTAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNL 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K R + +++ +V+++ + + Sbjct: 544 EYKSRTESQPQAIAVADVLSFIQGKVN 570 >gi|239993779|ref|ZP_04714303.1| threonyl-tRNA synthetase [Alteromonas macleodii ATCC 27126] Length = 638 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 79/447 (17%), Positives = 150/447 (33%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E RD L L + + G+ W G + + +R++ Sbjct: 227 KQLKSYLQRLEEAEKRDHRKIGKALNLF--HWQEEAPGMVFWHNDGWSIYTELESYVRKK 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E+ P + LW +SG +D Y + M + + P + IF Sbjct: 285 LREYGYDEVKGPLMMDRSLWEKSGHWDKYAENMFT-TESEKREYAVKPMNCPGHVQIFNQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F + + + Sbjct: 344 GLKSYRDLPLRMAEFGCCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQILEE-VSGCIK 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + G ++I ++ + P + E ++ ++ Sbjct: 403 MVYETYAAFGFENIKVKLSTRPEKRVGADEIWDKSE---------------AALADALKA 447 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 +DI E A Y + L D L + ++ G+ Sbjct: 448 NDIEFDYQPGEG--AFYGPKIEF---TLHDCLDRAWQCGTVQLDFSMPGRLGS------- 495 Query: 300 ATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 T+ DG+ V + +G++ ++ G +W +++ Sbjct: 496 -TYVAEDGERKVPVMIHRAILGSLERFIGILTEEFAGFFPLWLAPQQVVVMNIT------ 548 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + +L ++G D E+IG + L P ++VG K + +V + Sbjct: 549 DKQAEYASDCVKKLQELGFRAKSDLRNEKIGFKIREHTLKRIPYMLVVGDKEMEAGEVAV 608 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R M LE+ I A Sbjct: 609 RSRRGDDLGKMRLEDFIAMAQQEVVEK 635 >gi|30264646|ref|NP_847023.1| threonyl-tRNA synthetase [Bacillus anthracis str. Ames] gi|47530117|ref|YP_021466.1| threonyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49187467|ref|YP_030719.1| threonyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|49481700|ref|YP_038622.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52140935|ref|YP_085897.1| threonyl-tRNA synthetase [Bacillus cereus E33L] gi|65321944|ref|ZP_00394903.1| COG0441: Threonyl-tRNA synthetase [Bacillus anthracis str. A2012] gi|165871455|ref|ZP_02216102.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167636725|ref|ZP_02395009.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|167642081|ref|ZP_02400304.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|170689721|ref|ZP_02880895.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|170708708|ref|ZP_02899146.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|177653139|ref|ZP_02935426.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|196042361|ref|ZP_03109631.1| threonine--tRNA ligase [Bacillus cereus NVH0597-99] gi|218905803|ref|YP_002453637.1| threonyl-tRNA synthetase [Bacillus cereus AH820] gi|225866553|ref|YP_002751931.1| threonyl-tRNA synthetase [Bacillus cereus 03BB102] gi|227817360|ref|YP_002817369.1| threonyl-tRNA synthetase [Bacillus anthracis str. CDC 684] gi|228917215|ref|ZP_04080772.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929623|ref|ZP_04092641.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935883|ref|ZP_04098693.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228948301|ref|ZP_04110584.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229093673|ref|ZP_04224773.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-42] gi|229124142|ref|ZP_04253334.1| Threonyl-tRNA synthetase [Bacillus cereus 95/8201] gi|229186832|ref|ZP_04313987.1| Threonyl-tRNA synthetase [Bacillus cereus BGSC 6E1] gi|229601552|ref|YP_002868855.1| threonine--tRNA ligase [Bacillus anthracis str. A0248] gi|254686931|ref|ZP_05150789.1| threonyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066] gi|254720893|ref|ZP_05182684.1| threonyl-tRNA synthetase [Bacillus anthracis str. A1055] gi|254736684|ref|ZP_05194390.1| threonyl-tRNA synthetase [Bacillus anthracis str. Western North America USA6153] gi|254741722|ref|ZP_05199409.1| threonyl-tRNA synthetase [Bacillus anthracis str. Kruger B] gi|254754681|ref|ZP_05206716.1| threonyl-tRNA synthetase [Bacillus anthracis str. Vollum] gi|254757513|ref|ZP_05209540.1| threonyl-tRNA synthetase [Bacillus anthracis str. Australia 94] gi|30259321|gb|AAP28509.1| threonine--tRNA ligase [Bacillus anthracis str. Ames] gi|47505265|gb|AAT33941.1| threonyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49181394|gb|AAT56770.1| threonyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|49333256|gb|AAT63902.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974404|gb|AAU15954.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus cereus E33L] gi|164712752|gb|EDR18282.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167509956|gb|EDR85379.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|167527843|gb|EDR90677.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|170126388|gb|EDS95277.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|170666324|gb|EDT17113.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|172081663|gb|EDT66734.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|196026805|gb|EDX65442.1| threonine--tRNA ligase [Bacillus cereus NVH0597-99] gi|218536622|gb|ACK89020.1| threonyl-tRNA synthetase [Bacillus cereus AH820] gi|225787158|gb|ACO27375.1| threonine--tRNA ligase [Bacillus cereus 03BB102] gi|227005330|gb|ACP15073.1| threonine--tRNA ligase [Bacillus anthracis str. CDC 684] gi|228596569|gb|EEK54234.1| Threonyl-tRNA synthetase [Bacillus cereus BGSC 6E1] gi|228659444|gb|EEL15092.1| Threonyl-tRNA synthetase [Bacillus cereus 95/8201] gi|228689760|gb|EEL43567.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-42] gi|228811288|gb|EEM57626.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228823651|gb|EEM69473.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830010|gb|EEM75629.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842416|gb|EEM87507.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229265960|gb|ACQ47597.1| threonine--tRNA ligase [Bacillus anthracis str. A0248] Length = 645 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 80/434 (18%), Positives = 169/434 (38%), Gaps = 32/434 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L T + +G+ WLP G + I +++ G Sbjct: 237 LRMLEEAKERDHRKLGKELKLFTN-SQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGY 295 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG ++ Y M + +++ ++ P + ++++ I SYR Sbjct: 296 DHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYR 355 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K ++ L ++ Sbjct: 356 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYK 415 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIISL 245 GL++ R D +T+ + + D M D++ Sbjct: 416 DFGLENYSFRLS--------------YRDPEDTKKYYADDEMWEKAQGMLKEAMDEMGLD 461 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y DV ++ +L +++ +S ++ F ++ ++ G Sbjct: 462 YYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERF----ELSYVGE 510 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DGK H + G + + + + +P +AP ++ +I + QV D Sbjct: 511 DGKQHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVQVIPVSP--QVHLDYA 566 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +K+ L + G V D E+IG + A + P ++VG V+++ V ++ Sbjct: 567 KKVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQK 626 Query: 426 REDMSLEEVINYAS 439 E ++L+ ++ Sbjct: 627 SETIALDAFVDMIK 640 >gi|239637520|ref|ZP_04678492.1| threonyl-tRNA synthetase [Staphylococcus warneri L37603] gi|239596738|gb|EEQ79263.1| threonyl-tRNA synthetase [Staphylococcus warneri L37603] Length = 645 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 76/445 (17%), Positives = 153/445 (34%), Gaps = 33/445 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD L L G+ WLP G + I +++ Sbjct: 229 KAHLEMLEERKERDHRKIGKDLELFAN-SQLVGAGLPLWLPNGATIRREIERYIVDKEVS 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHI 122 G + P L + DL+ SG +D Y ++M ++ M+ P + I+ + Sbjct: 288 MGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMKLDETEEMVLRPMNCPHHMMIYNNKP 347 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ R E ++ + + + P+ K + ++ Sbjct: 348 HSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQ 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDD 241 ++ G + R D + + + D + D+ Sbjct: 408 DVYKDFGFEDYRFRLS--------------YRDPEDKEKYFDDDEMWNKAENMIKEAADE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y DV ++ ++ + + +S ++ F ++ T Sbjct: 454 LGLSYEEAIGEAAFYGPKLDV---QVKTAMGKEETLSTAQLD----FLLPERF----ELT 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + G DG+ H + G+ + + + +I +N+ H Sbjct: 503 YIGQDGEQHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPKQVEIIPVNLDLH---- 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D + I L G V DD E++G + A + P Q++VG K V +++V ++ Sbjct: 559 YDYAKSIQDELKSQGVRVEIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNEVNVRKY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + +E + +E I + Sbjct: 619 GSQDQETLEKDEFIWNLVDEIRLKK 643 >gi|145588388|ref|YP_001154985.1| prolyl-tRNA synthetase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189083506|sp|A4SVA7|SYP_POLSQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|145046794|gb|ABP33421.1| prolyl-tRNA synthetase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 580 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 124/235 (52%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ FL L+E P DAE+ SHKLM+R G+I + S GIY++LPLG K + V IIREE Sbjct: 1 MKASQSFLATLKEAPSDAEVVSHKLMVRAGLIRKISAGIYNYLPLGLKVIRKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW E+GR++ G E+LR+ DR+D+ + PT EEV+TD+ R+ Sbjct: 61 MNRAGAIELLMPMIQPAELWQETGRWEKMGPELLRIKDRHDRDFLIQPTSEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE RPRFG+MR REF MKDAYSFD EG K SY MF + Sbjct: 121 EIRSYKQLPVNFYQIQTKFRDERRPRFGIMRGREFSMKDAYSFDRDTEGLKKSYQTMFEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL+ + A++G IGG S EF V+ADTGE + D+ E Sbjct: 181 YTQIFKRMGLEFRAVTADNGAIGGSGSQEFHVIADTGEDAIVYC-PSSDYAANLE 234 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 67/195 (34%), Positives = 105/195 (53%), Gaps = 3/195 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P D+ N + D P+ K V RGIEVGH+F GT+YS M T+ GK + Sbjct: 382 PEPLVLDIRNAVIGDPSPDGKGVVDICRGIEVGHVFQLGTRYSEAMGCTYLDQQGKAQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE HD +GIIWP S+AP ++ + + + + AC++++ Sbjct: 442 VMGCYGIGVTRLLGAAIEQGHDERGIIWPISMAPVEVVICPMGYEKSEPVKAACDQLHDE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G+ FA +L+G P +V++G + ++DS+VE K R +++ L Sbjct: 502 LVAAGIDVILDDRNERPGAMFADWELIGAPFRVVIGDRGLADSQVEFKGRTDADSQNIPL 561 Query: 432 EEVINYASHRFSNNR 446 ++ + Sbjct: 562 AQIKEKVISAVQAAK 576 >gi|237807601|ref|YP_002892041.1| prolyl-tRNA synthetase [Tolumonas auensis DSM 9187] gi|259511628|sp|C4LBX6|SYP_TOLAT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|237499862|gb|ACQ92455.1| prolyl-tRNA synthetase [Tolumonas auensis DSM 9187] Length = 574 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 122/235 (51%), Positives = 160/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V AI+REE Sbjct: 1 MRTSQYLLSTLKETPNDAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLHKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+S+P +Q A+LW ESGR++ YG E+ RL DR+++ + GPTHEEV+T + R Sbjct: 61 MNKAGAIEVSMPVVQPAELWQESGRWEQYGPELCRLTDRHNRPFVLGPTHEEVVTALVRY 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR REF MKDAYSF + E +Y KM + Sbjct: 121 EVNSYKQLPLNLYQIQTKFRDEVRPRFGVMRGREFTMKDAYSFHMNKESLIETYGKMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R+GL P+ A++G IGG SHEF VLA++GE + D+ E Sbjct: 181 YCNIFSRMGLDFRPVLADTGSIGGTGSHEFHVLANSGEDLIAF-STESDYAANVE 234 Score = 186 bits (471), Expect = 8e-45, Method: Composition-based stats. Identities = 68/190 (35%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 258 ATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D + + RGIEVGHIF GTKYS M+AT GK ++MG Sbjct: 385 EVADIRNVVEGDPSPCGKGTLLLKRGIEVGHIFQLGTKYSEAMNATVLNEAGKATVMEMG 444 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSK 374 YGIG RVVAA IE + D +GIIW DS+APF++ +I + + ++ E+ Y L Sbjct: 445 CYGIGVTRVVAAAIEQNFDDRGIIWTDSIAPFQVVIIPMNMHKSERVQELAERFYNELQA 504 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + VE K+R +G + +++++E+ Sbjct: 505 AGVEVLLDDRKERPGVMFADMELIGIPHSIVIGDRSIDNGVVEYKYRRSGDKTEVAIDEI 564 Query: 435 INYASHRFSN 444 I + + Sbjct: 565 IAKIKAQLNK 574 >gi|217979642|ref|YP_002363789.1| threonyl-tRNA synthetase [Methylocella silvestris BL2] gi|217505018|gb|ACK52427.1| threonyl-tRNA synthetase [Methylocella silvestris BL2] Length = 648 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 80/438 (18%), Positives = 142/438 (32%), Gaps = 36/438 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD ++ L + G W P G + A +R G Sbjct: 232 YLRQIEEAEKRDHRRLGREMDLF--HFQEEGPGAIFWHPKGWTLFQTLIAYMRRRMEADG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E++ P + LW SG + ++ + M +++ P + IF++ +KSY Sbjct: 290 YLEVNTPQVLDRALWETSGHWQTFREHMFLTKTEDERIFALKPMNCPGHVQIFKNGLKSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R E GVMR R F DA+ F + S L I Sbjct: 350 RDLPLKIGEFGVVHRYEPSGALHGVMRVRAFTQDDAHIFCTEDQIMAESLKVN-DLILSI 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + ++ + P S E A+ +V T + Sbjct: 409 YQDFGFDDVIIKLSTRPEKRVGSEEAWDKAEAALGRVVDM-----LAAGGAKTGVN---- 459 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D++ + ++ FG A + Sbjct: 460 -----PGEGAFYGPKLEY---TLRDAIGREWQCGTTQVDFNMPGRFG--------AFYID 503 Query: 305 -ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 K V + G++ ++ G +W V ++ Q D Sbjct: 504 ADSDKKTPVMIHRAIFGSLERFTGILIEHFSGNLPLWLAPVQVIVATIT------QDADD 557 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ A K G V D E+I + L P+ ++VG + + V I+ Sbjct: 558 YALEVAAAARKYGLRVEADLRNEKISYKIREHSLAKTPVLIVVGKREGLERTVSIRRLGA 617 Query: 424 GIREDMSLEEVINYASHR 441 +SLE + + Sbjct: 618 SDTTSLSLETALERLADE 635 >gi|228999356|ref|ZP_04158935.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock3-17] gi|229006911|ref|ZP_04164541.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock1-4] gi|228754311|gb|EEM03726.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock1-4] gi|228760301|gb|EEM09268.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock3-17] Length = 643 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 79/434 (18%), Positives = 168/434 (38%), Gaps = 32/434 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L T + +G+ WLP G + I +++ G Sbjct: 235 LRMLEEAKERDHRKLGKELKLFTN-SQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGY 293 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG ++ Y M + +++ ++ P + ++++ I SYR Sbjct: 294 DHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYR 353 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K ++ L ++ Sbjct: 354 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYK 413 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSENTDFDDIISL 245 GL++ R D +T+ + + + D++ Sbjct: 414 DFGLENYSFRLS--------------YRDPEDTKKYYADDEMWEKAQSMLKEAMDEMGLE 459 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y DV ++ +L +++ +S ++ F ++ T+ G Sbjct: 460 YYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERF----ELTYVGE 508 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DGK H + G + + + + +P +AP ++ +I + QV D Sbjct: 509 DGKPHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVQVIPVSP--QVHLDYA 564 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +K+ L + G V D E+IG + A + P ++VG V+++ V ++ Sbjct: 565 KKVQEDLQRAGIRVEVDTREEKIGYKIREAQMQKIPYMLVVGDNEVAENGVNVRKYGEQK 624 Query: 426 REDMSLEEVINYAS 439 E ++L+ ++ Sbjct: 625 SETIALDAFVDMIK 638 >gi|242278821|ref|YP_002990950.1| threonyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638] gi|259516380|sp|C6BRH1|SYT_DESAD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|242121715|gb|ACS79411.1| threonyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638] Length = 642 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 82/444 (18%), Positives = 155/444 (34%), Gaps = 40/444 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K+ I + RD +L L + + G+ W P G + R+E Sbjct: 225 LKKHLAQIEEAKKRDHRKLGTQLDLFSVNP-EVGAGMTIWHPKGALIRAILEDFERKEHL 283 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G + P + +LW +SG YD+Y + M + ++++ P + +F+S + Sbjct: 284 KRGYQFVQGPLILKRELWEKSGHYDNYRENM-YFTEIDEQSYGIKPMNCLSHMLVFKSRL 342 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP +++ + R E G++R R F DA+ + Sbjct: 343 RSYRDLPQRYFEHGVVHRHEKSGVLHGLLRVRTFTQDDAHLICRPDQLRDEIIGVAKFV- 401 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 G + G E+ T + S + D + + Sbjct: 402 ------------------GDVMGLFGFEYEAEVSTKPEKAIGSDEDWDRATEALEGALKE 443 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + SI E A Y D+ + D+L + + + F ++ + Sbjct: 444 MGMEYSINEGDGAFYGPKIDII---IKDALERRWQCATIQCD----FTLPERFD----LS 492 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G DG+ H + +G++ V+ G W V +++ Sbjct: 493 YVGEDGERHRPVMLHRVILGSIERFIGVLLEHTGGALPAWLSPVQAKILTVT------DS 546 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + +K+ L + G DD E++G + A L P +++G K V+ V ++ Sbjct: 547 QNEFAQKVLQFLREKGIRAEVDDRNEKLGYKVREAQLEKIPYMLVIGDKEVAAESVNVRA 606 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R SLEE S Sbjct: 607 RDGEDPGLKSLEEAAELISTAIDE 630 >gi|94499191|ref|ZP_01305729.1| threonyl-tRNA synthetase [Oceanobacter sp. RED65] gi|94428823|gb|EAT13795.1| threonyl-tRNA synthetase [Oceanobacter sp. RED65] Length = 638 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 83/447 (18%), Positives = 154/447 (34%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K +L L+E RD L L + + G+ W G + + +R++ Sbjct: 227 KALKAYLQRLEEAEKRDHRKLGKALDLF--HWQEEAPGMVFWHSKGWTIYNILEDYMRKK 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 E+ P + +W +SG +D Y ++ + + + P + IF Sbjct: 285 LVEYQYEEVRAPMVMDVSMWEKSGHWDKY-QDNIFATESEKRTYAVKPMNCPGHLQIFNQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP+ + + R+E G+MR R F DA+ F + + + + Sbjct: 344 GLKSYRDLPYRMAEFGIVHRNEPSGSLHGLMRVRSFTQDDAHVFCTEEQILEEVTKCIQM 403 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + +++ ++ + P S E A+ G Sbjct: 404 VFDVYKDFGFDQNLSVKLSTRPEKRIGSDEIWDKAEKGLADAL----------------- 446 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 I E A Y + LFD L + ++ G Sbjct: 447 KANELDYEIQEGEGAFYGPKIEF---TLFDCLDRAWQCGTIQLDFSMPGRLG-------- 495 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + +G + +G++ ++ + G W +AP + ++NI + Sbjct: 496 AQYVDENGDRQTPVMIHRAILGSLERFIGILIEHYAGALPTW---LAPTQAMIMNITDN- 551 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D +K+ L+K G V D E+IG + L P ++ G K V+ V + Sbjct: 552 --QADYVKKVQQTLAKQGFRVDSDLRNEKIGFKIREHTLQKVPYLLVTGDKEVASDAVAV 609 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R MSLE+ N Sbjct: 610 RTRSGEDLGTMSLEDFAKLLESENQNR 636 >gi|154253109|ref|YP_001413933.1| threonyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1] gi|189083615|sp|A7HWJ3|SYT_PARL1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|154157059|gb|ABS64276.1| threonyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1] Length = 652 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 76/453 (16%), Positives = 155/453 (34%), Gaps = 53/453 (11%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +++E R D ++ L + + ++G W P G + + +R + Sbjct: 230 KAYLTMVEEAERRDHRKIGREMDLF--HLQEEAQGSVFWHPKGWRIWQALEQYVRRRIDA 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-------------MIYGPTH 110 G +E+ P L + W +SG + Y + M + D M P + Sbjct: 288 AGYVEVRTPQLLDSKFWEQSGHWGKYRENMFVVPDEVPSTDEDAPVLSGKAKLMAIKPMN 347 Query: 111 EEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEG 169 IF+ +KSYR+LP + R+E G+MR R+ DA+ F T + Sbjct: 348 CPAHIQIFKQGVKSYRDLPLRMAEFGCCHRNEPHGALHGLMRVRQMTQDDAHIFC-TEDQ 406 Query: 170 SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMD 229 K ++ +G +R + P + E D Sbjct: 407 IKEETEAFVALLESVYEDMGFTGTKLRLATRPDVRAGTDE-----------------TWD 449 Query: 230 FPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY 289 + + A Y + H L D++ + ++ ++ F Sbjct: 450 KAEKALEEALKALGKEFDFAPGEGAFYGPKLEFH---LRDAIGRSWQLGTLQLD----FV 502 Query: 290 FGTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 + + A++ G DG H + +G++ ++ +++G+ +W V Sbjct: 503 LPER----LDASYIGEDGNKHRPVMLHRAILGSLERFIGILIENYEGRFPMWLAPVQAVV 558 Query: 349 ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGS 408 ++ E++ +L G D E+I + + P + G Sbjct: 559 TTIT------SDADPYAEEMLQKLRDAGIRAELDLRNEKINYKVREHSVAKVPAIFVAGK 612 Query: 409 KFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 + + V I+ + ++ M L+E I + Sbjct: 613 REAEEGTVSIRRLGSQQQQTMKLDEAIKALAEE 645 >gi|293394735|ref|ZP_06639027.1| proline-tRNA ligase [Serratia odorifera DSM 4582] gi|291422861|gb|EFE96098.1| proline-tRNA ligase [Serratia odorifera DSM 4582] Length = 572 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 124/235 (52%), Positives = 164/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N AIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNANAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKD+YSF T E + +Y+ M+ + Sbjct: 121 EISSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDSYSFHTTQESLQATYDAMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL P++A++G IGG SHEF VLA +GE + D+ E Sbjct: 181 YSKIFSRMGLDFRPVQADTGSIGGSASHEFQVLAASGEDDIVF-STGSDYAANIE 234 Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 73/192 (38%), Positives = 113/192 (58%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ + + RGIEVGHIF GTKYS M AT +G DG++ + Sbjct: 380 PLPQVADIRNVVEGDASPDGQGTLLIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRNQLL 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWPD++APF ++++ + H ++ EK+YA Sbjct: 440 NMGCYGIGVTRVVAAAIEQNHDDRGIIWPDAIAPFHVAILPMNMHKSFRVQELAEKLYAE 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P +++G + + ++E K+R G ++ + Sbjct: 500 LRSHGIDVILDDRKERPGVMFADMELIGVPHSIVIGDRNLDSDEIEYKNRRVGEKQMIKT 559 Query: 432 EEVINYASHRFS 443 +++ Y + Sbjct: 560 GDIVEYLLAQIQ 571 >gi|289628621|ref|ZP_06461575.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651507|ref|ZP_06482850.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 2250] gi|330868600|gb|EGH03309.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 571 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 117/237 (49%), Positives = 163/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M ++ Sbjct: 121 ELNSYKQLPINMYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADHASLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF RLGLK P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSD-GSDYAANIEKA 236 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 112/207 (54%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ K RGIEVGHIF GTKYS M Sbjct: 364 DDKHYFGVNWERDLPVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGTKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK + MG YGIG RVVAA IE + D GIIW D++APF+I+LI ++ Sbjct: 424 KCQVLGENGKPVNLAMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALIPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 R+A +K+YA L+ G +V DD + G +FA +L+G P +++V + +++ + Sbjct: 484 DAVREATDKLYAELTAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNL 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K R + +++ +V+++ + + Sbjct: 544 EYKSRTESQPQAIAVSDVLSFIQGKVN 570 >gi|71736091|ref|YP_275923.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A] gi|257487021|ref|ZP_05641062.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|298488219|ref|ZP_07006255.1| Prolyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|114152230|sp|Q48FB4|SYP_PSE14 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|71556644|gb|AAZ35855.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157277|gb|EFH98361.1| Prolyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320323063|gb|EFW79152.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. B076] gi|320329665|gb|EFW85654.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race 4] gi|330892229|gb|EGH24890.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020] gi|330988958|gb|EGH87061.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009335|gb|EGH89391.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 571 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 117/237 (49%), Positives = 163/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M ++ Sbjct: 121 ELNSYKQLPINMYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADHASLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF RLGLK P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSD-GSDYAANIEKA 236 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 112/207 (54%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ K RGIEVGHIF GTKYS M Sbjct: 364 DDKHYFGVNWERDLPVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGTKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK + MG YGIG RVVAA IE + D GIIW D++APF+I+LI ++ Sbjct: 424 KCQVLGENGKPVNLAMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALIPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 R+A +K+YA L+ G +V DD + G +FA +L+G P +++V + +++ + Sbjct: 484 DAVREATDKLYAELTAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNL 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K R + +++ +V+++ + + Sbjct: 544 EYKSRTESQPQAIAVADVLSFIQGKVN 570 >gi|222055493|ref|YP_002537855.1| prolyl-tRNA synthetase [Geobacter sp. FRC-32] gi|254782902|sp|B9LZK1|SYP_GEOSF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|221564782|gb|ACM20754.1| prolyl-tRNA synthetase [Geobacter sp. FRC-32] Length = 570 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 127/251 (50%), Positives = 171/251 (68%), Gaps = 1/251 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+P ++E P DAE+ SH+LMLR GMI + + G+Y++LPLG +++ V I+REE Sbjct: 1 MRYSQYFIPTVKETPSDAEVISHQLMLRGGMIRKLAAGVYNYLPLGLRSIRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +PT+Q A+LW ESGR++ YGKE+LR DR D GPTHEEV+TD+ R Sbjct: 61 MNRAGAIELLMPTVQPAELWQESGRWEQYGKELLRFRDRKDTEFCLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ + + SY+KM+ + Sbjct: 121 EVKSYRQLPINLYQIQGKFRDEIRPRFGLMRGREFIMKDAYSFDVDEKAADISYDKMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK + A++G IGG SHEF+VLA++GE + D+ E + Sbjct: 181 YRRIFERCGLKFRAVEADTGSIGGSWSHEFMVLAESGEDAIVSCTAC-DYAANVEKAEAR 239 Query: 241 DIISLNSIVEQ 251 + Sbjct: 240 QSAVTEHADPR 250 Score = 189 bits (480), Expect = 7e-46, Method: Composition-based stats. Identities = 78/187 (41%), Positives = 111/187 (59%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENK---RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N L D P + RGIEVGH+F GTKYS M AT+ ADGK+ + MG Sbjct: 380 ADIRNVVLGDPCPRCESGTLEMWRGIEVGHVFKLGTKYSKAMKATYLDADGKEQIIFMGC 439 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R VAA IE +HD GII+P +APF + + + V R+A E IY +L+ G Sbjct: 440 YGIGIGRTVAACIEQNHDENGIIFPLPIAPFHCIISALNMKEDVVREASEAIYGQLAAAG 499 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G +F ADL+G P++++VGSK ++D KVE+K R +G E +S+ + + Sbjct: 500 IEVLLDDRDERPGFKFKDADLIGIPMRIVVGSKNLADGKVELKCRRSGEVELLSIADAVE 559 Query: 437 YASHRFS 443 + Sbjct: 560 KVKAAVN 566 >gi|317047006|ref|YP_004114654.1| prolyl-tRNA synthetase [Pantoea sp. At-9b] gi|316948623|gb|ADU68098.1| prolyl-tRNA synthetase [Pantoea sp. At-9b] Length = 572 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 126/277 (45%), Positives = 176/277 (63%), Gaps = 5/277 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTQYLLSTLKETPSDAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR+ DR+++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWEESGRWEQYGPELLRIKDRHERPFVLGPTHEEVVTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQESLQETYDAMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN---- 236 Y + F R+GL ++A++G IGG SHEF VLA +GE V D+ E Sbjct: 181 YSQSFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIF-SSESDYAANIEKAEAL 239 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + + Q+ P+A T E+ + + Sbjct: 240 APAGERPQPTQAMVQFDTPHAKTIAELVEQHQLPIEK 276 Score = 173 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 68/193 (35%), Positives = 111/193 (57%), Gaps = 3/193 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P D+ N D P+ K + RGIEVGHIF GTKYS + A +G DG++ + Sbjct: 380 PEPRVEDIRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSDALKAAVQGEDGRNQIM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWP ++APF+++++ + H ++ +++Y Sbjct: 440 TMGCYGIGITRVVAAAIEQNHDERGIIWPAALAPFEVAILPMNMHKSFRVKEVADELYNA 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P +++G + + ++++E K R +E + Sbjct: 500 LRAKGIDVILDDRKERPGVMFADMELIGVPHTIVIGDRNLDNAEIEYKARSASEKEMIKH 559 Query: 432 EEVINYASHRFSN 444 E++++ + + Sbjct: 560 SEIVDFLAKALNK 572 >gi|325982765|ref|YP_004295167.1| prolyl-tRNA synthetase [Nitrosomonas sp. AL212] gi|325532284|gb|ADZ27005.1| prolyl-tRNA synthetase [Nitrosomonas sp. AL212] Length = 569 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 119/235 (50%), Positives = 163/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ L+E P +AE+ SHKLMLR G+I + G+Y+W+PLG + L + IIREE Sbjct: 1 MRVSQFFVSTLKEAPAEAELISHKLMLRAGLIKRLGSGLYTWMPLGLRVLRKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N +GA+E+ +P +Q A+LW E+GR+D +G +ML++ DR+ +GPTHEE++TD R Sbjct: 61 MNSSGAVEILMPAIQPAELWQETGRWDVFGLQMLKIKDRHKHDFCFGPTHEEIITDTVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 121 EIKSYRQLPLNFYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHTNEDSLMQTYQLMYET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R+GL+ + A++G IGG SHEF VLAD+GE + D D+ E Sbjct: 181 YSRIFTRIGLQFRAVSADTGAIGGSGSHEFHVLADSGEDAIAFCPD-SDYAANIE 234 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 66/185 (35%), Positives = 104/185 (56%), Gaps = 3/185 (1%) Query: 261 DVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D+ P+ K + RGIEVGHIF TKYS M ATF G Y++MG YG Sbjct: 382 DIRNVVPGDASPDGKGILEICRGIEVGHIFQLRTKYSKIMKATFLDESGSTQYMEMGCYG 441 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGC 377 IG R+VAA IE +HD GII+P ++APF++++I I + ++ EK+Y + Sbjct: 442 IGVSRIVAAAIEQNHDEYGIIFPAAIAPFQLAIIPIGLQKNPQVKEIVEKLYQQFLDAHI 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V DD E+ G FA +L+G P ++++G + + S +E + R E + ++E+ + Sbjct: 502 EVLLDDRDERPGVMFADMELMGIPHRIVIGERGLKQSTIEYQGRKDRSPEAIFIDEIFPF 561 Query: 438 ASHRF 442 + Sbjct: 562 IFTKL 566 >gi|75764566|ref|ZP_00744025.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74487945|gb|EAO51702.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 445 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 72/443 (16%), Positives = 153/443 (34%), Gaps = 40/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 39 EYLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLREIQKEY 96 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 97 NYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 155 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TP+ + + Sbjct: 156 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPKQIEDEIKSVMAQIDY 214 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 215 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLN 256 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 257 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 305 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + + + V Sbjct: 306 DENNDKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVVPVSNAVHE 360 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 C ++ +L++ G V D E++G + A + P +++G K + V ++ Sbjct: 361 QYCSEVAHKLAQAGVRVEQDARDEKLGYKIREAQMQKVPYFLVIGDKEMESGAVNVRKYG 420 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 E ++L+ + N Sbjct: 421 EEKSEVVALDVFVARIEEEIKNR 443 >gi|313673284|ref|YP_004051395.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672] gi|312940040|gb|ADR19232.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672] Length = 640 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 82/440 (18%), Positives = 154/440 (35%), Gaps = 41/440 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L G + G+ W+P G K + R E + Sbjct: 228 EYLNRLEEAKKRDHRRLGKELELF-GTFDEIGSGLICWMPKGAKVRATIEEFWRREHFKN 286 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + ++LW SG D Y + M D + P + I++S +S Sbjct: 287 GYDLLYTPHIGKSNLWQTSGHLDFYSENMYSPMDIEGQNYYIKPMNCPFHIMIYKSKNRS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + ++ +R E G++R R F DA+ + + ++ L Sbjct: 347 YRDLPLRWAELGTVYRYERSGVLHGLLRVRGFTQDDAHIICAQDQIVEE-IEEVLKFSLD 405 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I+ G SI + P S Sbjct: 406 IWKTFGFTSIKGYIATRPEKS-----------------VGDDSMWKAATDSLMESIKKSG 448 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E A Y D+ K+ D++ +++ + F ++ + + Sbjct: 449 IEYEIDEGGGAFYGPKIDL---KVKDAIGREWQMTTIQFD----FNLPERFDMV----YV 497 Query: 304 GADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG + + +G++ V+ + G W V +++ Sbjct: 498 DRDGKEKRPYMVHRALLGSLERFFGVLIEHYAGAFPFWLAPVQIKIMNI------SDEQA 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D CE++Y RL G V D E+IG + A L P +++G++ + V ++ R Sbjct: 552 DYCEQLYRRLKAEGFRVEMDLRNEKIGYKIREAQLFKVPHMIVIGNQEKEKNHVSVRLRN 611 Query: 423 TGIREDMSLEE---VINYAS 439 + ++ E VI+ + Sbjct: 612 GETKNNLDFSEYFGVIDELN 631 >gi|294782476|ref|ZP_06747802.1| threonine--tRNA ligase [Fusobacterium sp. 1_1_41FAA] gi|294481117|gb|EFG28892.1| threonine--tRNA ligase [Fusobacterium sp. 1_1_41FAA] Length = 637 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 82/443 (18%), Positives = 165/443 (37%), Gaps = 41/443 (9%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R K+ + + RD +L L I ++ G +LP G + + + R+E Sbjct: 226 RLKKHLKFMEEAEKRDHRKLGKELELF--FISEYGPGFPFFLPKGMVFRNVLIDLWRKEH 283 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G +++ P + + +LW SG + +Y + M ++ ++ P + F+ Sbjct: 284 EKAGYLQLETPIMLNKELWEISGHWFNYRENMYT-SEIDELEFAIKPMNCPGGVLSFKHQ 342 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP ++ R E G+MR R F D++ F +TP+ + + Sbjct: 343 LHSYKDLPARLAELGKVHRHEFSGALHGLMRVRSFTQDDSHIF-MTPDQVQDEIIGVVNL 401 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + + +L + + P S E D + D Sbjct: 402 IDKFYSKLFGFEYEIELSTKPEKAIGSQE-----------------IWDMAESALAGALD 444 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I A Y D K+ D++ + ++ F ++ Sbjct: 445 KLGRKYKINPGDGAFYGPKLDF---KIKDAIGRMWQCGTIQLD----FNLPERFD----V 493 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 T+ G DG+ H + G++ ++ + G +W V ++L + Sbjct: 494 TYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFPMWLAPVQVKVLTL------ND 547 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEI 418 C ++I A+L ++G DD E IG + A+ P+Q+I+G V + +V I Sbjct: 548 ECIPYAKEIMAKLQELGIRAELDDRNETIGYKIREANGRYKIPMQLIIGKNEVENKEVNI 607 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + + SL++ Y Sbjct: 608 RRFGSKDQFPKSLDDFYEYVVDE 630 >gi|290969075|ref|ZP_06560610.1| threonine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L] gi|290781031|gb|EFD93624.1| threonine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L] Length = 635 Score = 248 bits (633), Expect = 2e-63, Method: Composition-based stats. Identities = 86/436 (19%), Positives = 148/436 (33%), Gaps = 39/436 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + H+ G + G +++ RE E+ Sbjct: 237 EAEKRDHRKLGKQLDLFS--FHEEGPGFPFFHAKGMVLRNSLLKFWRELHAEADYDEIMT 294 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 PT+ + LW +SG +D Y M +++ P + +++S + SYR+ P Sbjct: 295 PTILNRQLWEQSGHWDHYRDNM-YFTTIDEQPYAIKPMNCPGGILVYKSSVHSYRDFPIR 353 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 ++ L R EL G+ R R F DA+ F L P K + + + + + + GL Sbjct: 354 AAELGLVHRHELHGALHGLFRVRCFTQDDAHIFML-PSQMKDEISGVMDLFDKAYKQFGL 412 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 E+ V T S + + + + ++ I E Sbjct: 413 ------------------EYHVELSTRPEDSMGSDEIWESATKTLHEVIEEKQVPYVINE 454 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D H K R + G I T+ G DG+ H Sbjct: 455 GDGAFYGPKLDFHL----------KDCLGRTWQCGTI-QLDMLMPERFDVTYIGEDGQKH 503 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 M + + + +P +AP +I + I E Sbjct: 504 RPVMVHRAC--FGSIERFLGIITENYAGAFPVWLAPVQIKFLPISDK---QLAYAEDTAR 558 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 R K G V D E+IG + A + P IVG K ++ + ++ R G + Sbjct: 559 RFKKAGLRVEVDTSSEKIGYKIRKAQMEKVPYMAIVGDKEMAAGTISVRERTQGDIGVKA 618 Query: 431 LEEVINYASHRFSNNR 446 EEV++ + + Sbjct: 619 AEEVLHMIKQLADSRQ 634 >gi|118479724|ref|YP_896875.1| threonyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|118418949|gb|ABK87368.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] Length = 646 Score = 248 bits (633), Expect = 2e-63, Method: Composition-based stats. Identities = 80/434 (18%), Positives = 169/434 (38%), Gaps = 32/434 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L T + +G+ WLP G + I +++ G Sbjct: 238 LRMLEEAKERDHRKLGKELKLFTN-SQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGY 296 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG ++ Y M + +++ ++ P + ++++ I SYR Sbjct: 297 DHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYR 356 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K ++ L ++ Sbjct: 357 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYK 416 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIISL 245 GL++ R D +T+ + + D M D++ Sbjct: 417 DFGLENYSFRLS--------------YRDPEDTKKYYADDEMWEKAQGMLKEAMDEMGLD 462 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y DV ++ +L +++ +S ++ F ++ ++ G Sbjct: 463 YYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERF----ELSYVGE 511 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DGK H + G + + + + +P +AP ++ +I + QV D Sbjct: 512 DGKQHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVQVIPVSP--QVHLDYA 567 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +K+ L + G V D E+IG + A + P ++VG V+++ V ++ Sbjct: 568 KKVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQK 627 Query: 426 REDMSLEEVINYAS 439 E ++L+ ++ Sbjct: 628 SETIALDAFVDMIK 641 >gi|77457424|ref|YP_346929.1| prolyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1] gi|114152233|sp|Q3KH16|SYP_PSEPF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|77381427|gb|ABA72940.1| proline tRNA synthetase [Pseudomonas fluorescens Pf0-1] Length = 571 Score = 248 bits (633), Expect = 2e-63, Method: Composition-based stats. Identities = 113/237 (47%), Positives = 161/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + + V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G++E+ +P+ Q A+LW ESGR++ YG E+LR+ DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MDAAGSLEVLMPSTQPAELWQESGRWEEYGPELLRIKDRHGRDFCAGPTHEEVITDLMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKD+YSF + +Y++M + Sbjct: 121 ELSSYKQLPINLYQIQTKFRDEIRPRFGLMRGREFIMKDSYSFHADQASLQVTYDRMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF RLGLK P+ A++G IGG SHEF VLA++GE + + D+ E Sbjct: 181 YCNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVF-SNGSDYAANIEKA 236 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 114/207 (55%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ K RGIEVGHIF G KYS M Sbjct: 364 DDKHYFGVNWERDLPVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGNKYSKAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK ++MG YGIG RVVAA IE ++D GIIW D++APF+I+L+ ++ Sbjct: 424 KCEVLGENGKPVTLEMGCYGIGVSRVVAAAIEQNNDENGIIWSDALAPFQIALVPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 ++ R+A +K+YA L+ G +V DD + G +FA +L+G P +++V + +++ + Sbjct: 484 ELVREATDKLYAELTAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNL 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K R G + + + +V+++ R Sbjct: 544 EYKSRTEGQAQALPVADVLSFLQARIR 570 >gi|46579756|ref|YP_010564.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough] gi|81830448|sp|Q72CD8|SYP_DESVH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|46449171|gb|AAS95823.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough] gi|311233547|gb|ADP86401.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris RCH1] Length = 574 Score = 248 bits (633), Expect = 2e-63, Method: Composition-based stats. Identities = 127/237 (53%), Positives = 167/237 (70%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ ++P L+E P DAE+ SHKL++R GMI + + GIY+++P+G +AL+ V AI+REE Sbjct: 1 MRWSRCYIPTLKEAPSDAEVVSHKLLVRAGMIRKLTSGIYTFMPMGLRALNKVAAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P +Q ADLW E+GR++ YGKE+LR DRND+ GPTHEEV+TD+ R Sbjct: 61 MNRAGAQEVLMPMVQPADLWQETGRWEFYGKELLRFRDRNDRDYCLGPTHEEVITDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD G SY M+ + Sbjct: 121 EVRSYRQLPINLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFDRDQSGCDESYKAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF RLGL+ + A+SG IGG SHEF+VLADTGE + ++ E Sbjct: 181 YQRIFSRLGLRFRAVEADSGSIGGSFSHEFMVLADTGEDTLAVCTAC-EYAANVERA 236 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 66/190 (34%), Positives = 104/190 (54%), Gaps = 2/190 (1%) Query: 253 TAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A A +D+ D P +GIEVGH+F G KYS M+ATF +GK+ Sbjct: 374 DAAIEAYADLRMITASDPCPRCGGAVELPKGIEVGHVFKLGLKYSKSMNATFLDENGKEQ 433 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + MG YGIG RVVA+ IE ++DG GI++P +AP++++L+ + ++ +I + Sbjct: 434 VMVMGCYGIGVSRVVASCIEQNNDGDGIVFPPPIAPYEVALLLLDPKNEEAAAKAAEIES 493 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L G DV DD E+ G +F ADL+G P Q+++G K ++ VE K+R +G + ++ Sbjct: 494 FLEAEGHDVLLDDRDERPGVKFKDADLIGSPYQLVLGGKGLARGVVEAKNRRSGEKTELP 553 Query: 431 LEEVINYASH 440 +E Sbjct: 554 VEGFAEAFRD 563 >gi|269137906|ref|YP_003294606.1| prolyl-tRNA synthetase [Edwardsiella tarda EIB202] gi|267983566|gb|ACY83395.1| prolyl-tRNA synthetase [Edwardsiella tarda EIB202] gi|304557958|gb|ADM40622.1| Prolyl-tRNA synthetase [Edwardsiella tarda FL6-60] Length = 572 Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 127/235 (54%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L+ V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLNKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNYAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGDRPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF T + +Y+ M+ + Sbjct: 121 EISSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTTQASLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + D+ E Sbjct: 181 YGRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVF-STASDYAANIE 234 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 70/187 (37%), Positives = 117/187 (62%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K + RGIEVGHIF GTKY+ ++AT +G DG++ + MG Y Sbjct: 385 ADIRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGTKYTEALNATVQGEDGRNQLMTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVG 376 GIG RVVAA IE +HD +GIIWPD++APF+++++ + H ++ E++Y L G Sbjct: 445 GIGVTRVVAAAIEQNHDERGIIWPDAIAPFQVAILPMNMHKSFRVKEVAERLYDELRAKG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P V++G + + ++++E K+R +G + +S++E+ Sbjct: 505 IEVLLDDRKERPGVMFADMELIGIPHTVVIGDRNLDNNEIEYKYRRSGEKLMISVDEIAA 564 Query: 437 YASHRFS 443 + + + Sbjct: 565 FLQAQIA 571 >gi|169828188|ref|YP_001698346.1| threonyl-tRNA synthetase [Lysinibacillus sphaericus C3-41] gi|168992676|gb|ACA40216.1| Threonyl-tRNA synthetase 2 [Lysinibacillus sphaericus C3-41] Length = 637 Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 71/444 (15%), Positives = 150/444 (33%), Gaps = 43/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 KYF+ + + R+ +L L M + + G+ +L GQ + + + +R Q + Sbjct: 232 KYFVFLEEAEKRNHRKLGKELSLF--MFSEEAPGMPFYLANGQILRNELESYLRNLQAKY 289 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + LW +SG +D Y M ++++ P + IF++++ S Sbjct: 290 DYQEVRTPLMMNQRLWEQSGHWDHYKDNM-YFTQVDNQSFALKPMNCPGHMLIFKNNLHS 348 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + R E G++R R F DA+ F TP+ + Sbjct: 349 YRDLPIRMAEFGQVHRHEFSGALNGLLRVRSFCQDDAHIF-ATPQQIEDEIALALNIIDE 407 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G + V T D + ++ Sbjct: 408 VYDVFGFQYT------------------VELSTRPDDYMGELALWDQAEEALENVLLNLG 449 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 +I E A Y D+H + D++ + + + ++ F K+ T+ Sbjct: 450 IDYTINEGDGAFYGPKIDIH---IKDAIQRSHQCATVQLD----FQLPEKFD----LTYI 498 Query: 304 GADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + + + R + +IE I Sbjct: 499 NEHNEKVRPIVIHRAVFGSIDRFLGILIEHFGGAFPIWLAPQQVQVIAVA-------DAH 551 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +D ++ L V DD E++G + A L P +++G + ++ V ++ Sbjct: 552 QDYAIQVVKALQHEQIRVQIDDRQEKLGKKIREAQLHKIPYIIVIGDRETANQNVSVRRH 611 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + ++ +++ + Sbjct: 612 GQQASVEYTVSQLMKEITEAIKQK 635 >gi|254282289|ref|ZP_04957257.1| threonyl-tRNA synthetase [gamma proteobacterium NOR51-B] gi|219678492|gb|EED34841.1| threonyl-tRNA synthetase [gamma proteobacterium NOR51-B] Length = 643 Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 78/437 (17%), Positives = 142/437 (32%), Gaps = 40/437 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD + KL L + + + G+ W P G + +RE+Q G Sbjct: 231 YLNRIAEAEKRDHRKIAKKLGLF--HLQEEAPGMVFWHPAGWVIYQTIERYMREQQLAYG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L LW SG D + M L +++ P + +F +KSY Sbjct: 289 YEEIKTPQLVDYSLWQRSGHADKFADGMFMLK-SDERDFAVKPMNCPCHIQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F + + Sbjct: 348 RDLPLRLAEFGSCHRNEPSGSLHGIMRVRGFVQDDAHIFCTEDQIQGE-VGDFIDMLHDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + R + P S D + D Sbjct: 407 YADFGFSEVIYRLSTRPEQR-----------------VGSDADWDRAEAALAKALDAKSL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D + ++ ++ A + Sbjct: 450 PWEELPGEGAFYGPKIEF---SLKDCIGRVWQLGTIQVDFSMPGRLD--------AQYVA 498 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG V + +G+ ++ +G+ W ++P + ++NI D Sbjct: 499 EDGSRKVPVMLHRAVLGSFERFIGILIEHFEGEFPTW---LSPQQAVIVNITDKHA---D 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + L G D E+IG + ++ P ++VG + V + V ++ R Sbjct: 553 YALSVQETLKNNGFRAVCDLRNEKIGFKIRELEMKKTPYIIVVGDQEVESATVSVRARHG 612 Query: 424 GIREDMSLEEVINYASH 440 M L+ ++ + Sbjct: 613 RDLGSMDLDSLVTTLTD 629 >gi|113460987|ref|YP_719054.1| threonyl-tRNA synthetase [Haemophilus somnus 129PT] gi|123031343|sp|Q0I3M2|SYT_HAES1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|112823030|gb|ABI25119.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Haemophilus somnus 129PT] Length = 642 Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 71/442 (16%), Positives = 136/442 (30%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD L L + + + G+ W G + +R + Sbjct: 232 YLHRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYD 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +G + +Y +++ ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWERTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F T + + I Sbjct: 349 RDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIKMVYDI 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ + P D Sbjct: 408 YSTFGFTDIFVKLSTRPEKR-----------------IGEDVMWDRAEQGLANALKHNGL 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y + L D L + ++ AT+ Sbjct: 451 EYEIQEGEGAFYGPKIEF---ALRDCLDREWQCGTIQLDFALPGRLD--------ATYVA 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G++ +I + G W + +++ D Sbjct: 500 EDNARRTPVMIHRAILGSIERFIGIITEEYAGFFPTWLAPIQAVVMNIT------DSQAD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +K+ + S+ G V D E++G + L P ++ G K + ++K+ ++ R Sbjct: 554 YVQKVVKQFSEAGLRVKADIRNEKVGFKIREHTLRRVPYMLVCGDKEIVENKIAVRTRKG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 S+EE + + Sbjct: 614 TDLGTFSVEEFVEILKQQVRKR 635 >gi|74317025|ref|YP_314765.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259] gi|123731846|sp|Q3SK34|SYT_THIDA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|74056520|gb|AAZ96960.1| threonyl-tRNA synthetase, class IIa [Thiobacillus denitrificans ATCC 25259] Length = 637 Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 76/445 (17%), Positives = 145/445 (32%), Gaps = 41/445 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L L+E RD + +L L + + G+ W P G + +RE+ Sbjct: 231 EAYLHRLEEAEKRDHRRLAKQLDL--LHMQDEAPGMVFWHPKGWIVWQQIEQYMREKFVE 288 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + +W +SG +++Y M ++ P + IF S + Sbjct: 289 YGYQEVRTPAVMDRSMWEKSGHWENYRDNMFT-TASENRDYAVKPMNCPGHVQIFNSGLH 347 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F DA+ F + + + V Sbjct: 348 SYRDLPLRLAEFGSCHRNEPSGALHGIMRVRGFTQDDAHIFCMEEQVEQE-VADFIVMLQ 406 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +++ G + ++ + P S E D + + Sbjct: 407 KVYADFGFNDVLVKLSTRPDKRVGSDE-----------------SWDKAESALAAALEKN 449 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + L D+L + ++ G A F Sbjct: 450 GLSFDLQPGEGAFYGPKIEF---TLKDTLGRLWQCGTIQLDFNLPVRLG--------AEF 498 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D + +G+M ++ H G +W V +++ + Sbjct: 499 VAEDNTRKIPVMLHRAILGSMERFIGILIEHHAGNFPLWLAPVQVMVMNI------SERQ 552 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E + L + G D +I + L P Q++VG K + V ++ R Sbjct: 553 AAYAEAVAEALRRAGIRAALDLSNNKINYKIREHSLQKLPYQLVVGDKEMEARVVAVRAR 612 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + L+++I + Sbjct: 613 GNQDMGQLGLDDLIARLRAEVLARQ 637 >gi|317154070|ref|YP_004122118.1| prolyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2] gi|316944321|gb|ADU63372.1| prolyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2] Length = 579 Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 127/227 (55%), Positives = 171/227 (75%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y++P L+E+P DAE+ SHKL++R GMI + + GIY++LPLG ++++ V I+REE Sbjct: 1 MRLSRYYIPTLKEDPADAEVVSHKLLMRAGMIRKLTSGIYNYLPLGLRSINKVARIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+S+P +Q ADLW E+GR+D YGKE+LRL DR+ + GPTHEEV+TD+ R Sbjct: 61 MDRAGAMEVSMPMVQPADLWQETGRWDYYGKELLRLKDRHGRDYCLGPTHEEVITDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQ+Q KFRDE+RPRFG+MR REF+MKDAYSFD G++ SY MF + Sbjct: 121 EIKSYKQLPINLYQVQTKFRDEIRPRFGLMRGREFIMKDAYSFDRDEAGAETSYWAMFEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 Y F R+GL+ P++A+SG IGGD SHEF+VLADTGE + K Sbjct: 181 YKAAFSRIGLRFKPVQADSGAIGGDFSHEFMVLADTGEDTIASCKSC 227 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 67/191 (35%), Positives = 105/191 (54%), Gaps = 2/191 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 +D+ + D PE + +GIEVGH+F G KYS M ATF +GK Sbjct: 375 GRDCKIEKFADLRVIEPTDPCPECGSEIEFTKGIEVGHVFKLGLKYSKKMEATFLDENGK 434 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 Y+ MG YGIG R+VA+ IE ++D G +P S+APF+ LI++ D+ ++ Sbjct: 435 TQYMVMGCYGIGVSRIVASAIEQNNDEAGCCFPPSIAPFEAVLISLGGKDEAVDAKAAEL 494 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 Y +L +G D +DD E+ G +FA ADL+G+P+Q+++G K ++ VE K R TG + + Sbjct: 495 YEQLRVLGVDACFDDRKERPGVKFAEADLIGYPMQLVLGGKGLASGIVEAKDRKTGEKIE 554 Query: 429 MSLEEVINYAS 439 + + + Sbjct: 555 LPINGFAEAFT 565 >gi|228921082|ref|ZP_04084417.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228838628|gb|EEM83934.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 640 Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 71/444 (15%), Positives = 153/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + R+ +L L M + + G+ +LP GQ + + A +RE Q Sbjct: 234 EYLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQMIRNELEAFLREIQKEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + ++W SG + Y M ++ ++K+ P + +F++ + S Sbjct: 292 KYQEVRTPFMMNQEVWERSGHWGHYKDNM-YFSEVDNKSFALKPMNCPGHMLMFKNKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TP+ + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPKQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + + +G++ A++ G W + + I + V Sbjct: 501 DENNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHE 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 ++ +L++ G V D E++G + + P +++G K + V ++ Sbjct: 556 QYASEVAHKLAQAGIRVEQDARDEKLGYKIREVQMQKVPYVLVIGDKEMEKGAVNVRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E ++L+ + N + Sbjct: 616 EEKSEVVALDVFVASIEEEIKNRK 639 >gi|228993303|ref|ZP_04153219.1| Threonyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] gi|228766371|gb|EEM15014.1| Threonyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] Length = 643 Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 79/434 (18%), Positives = 168/434 (38%), Gaps = 32/434 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L T + +G+ WLP G + I +++ G Sbjct: 235 LRMLEEAKERDHRKLGKELKLFTN-SQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGY 293 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG ++ Y M + +++ ++ P + ++++ I SYR Sbjct: 294 DHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYR 353 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K ++ L ++ Sbjct: 354 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYK 413 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSENTDFDDIISL 245 GL++ R D +T+ + + + D++ Sbjct: 414 DFGLENYSFRLS--------------YRDPEDTKKYYADDEMWEKAQSMLKEAMDEMGLE 459 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y DV ++ +L +++ +S ++ F ++ T+ G Sbjct: 460 YYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERF----ELTYVGE 508 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DGK H + G + + + + +P +AP ++ +I + QV D Sbjct: 509 DGKPHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVQVIPVSP--QVHLDYA 564 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +K+ L + G V D E+IG + A + P ++VG V+++ V ++ Sbjct: 565 KKVQEDLQRAGIRVEVDTREEKIGYKIREAQMQKIPYMLVVGDNEVAENGVNVRKYGEQK 624 Query: 426 REDMSLEEVINYAS 439 E ++L+ ++ Sbjct: 625 SETIALDAFVDMIK 638 >gi|229592381|ref|YP_002874500.1| prolyl-tRNA synthetase [Pseudomonas fluorescens SBW25] gi|229364247|emb|CAY51951.1| proline tRNA synthetase [Pseudomonas fluorescens SBW25] Length = 596 Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 116/237 (48%), Positives = 160/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DA + SH+LMLR GMI + + G+Y+WLP+G K + V AI+REE Sbjct: 26 MRTSQYLLATQKETPSDAVVISHQLMLRAGMIRKLASGLYTWLPMGLKVMRKVEAIVREE 85 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N G++E+ +P+ Q A+LW ESGR++ YG E+LR DR+ + GPTHEEV+TD+ R+ Sbjct: 86 MNAAGSLEVLMPSTQPAELWQESGRWEEYGPELLRFKDRHGRDFCAGPTHEEVITDLMRN 145 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M + Sbjct: 146 ELSSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQVTYDRMHQA 205 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y +F RLGLK P+ A++G IGG SHEF VLA++GE + + D+ E Sbjct: 206 YCNVFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVF-SNGSDYAANIEKA 261 Score = 165 bits (417), Expect = 2e-38, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 113/207 (54%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ K RGIEVGHIF G KYS M Sbjct: 389 DDKHYFGVNWERDLPVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGNKYSKAM 448 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK ++MG YGIG RVVAA IE ++D KGIIW D++APF+++L+ ++ Sbjct: 449 KCEVLGENGKPITLEMGCYGIGVSRVVAAAIEQNNDEKGIIWSDALAPFQVALVPLRYET 508 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + R+A +K+YA L+ G +V DD + G +FA +L+G P +++V + ++D + Sbjct: 509 EQVREATDKLYAELTAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLADGNL 568 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K R + + + +V+++ R Sbjct: 569 EYKSRTEAEAQPLPVADVLSFLQARIR 595 >gi|301056082|ref|YP_003794293.1| threonyl-tRNA synthetase [Bacillus anthracis CI] gi|300378251|gb|ADK07155.1| threonyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI] Length = 645 Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 80/434 (18%), Positives = 167/434 (38%), Gaps = 32/434 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L T + +G+ WLP G + I +++ G Sbjct: 237 LRMLEEAKERDHRKLGKELKLFTN-SQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGY 295 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG ++ Y M + +++ ++ P + ++++ I SYR Sbjct: 296 DHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYR 355 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K ++ L ++ Sbjct: 356 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYK 415 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIISL 245 GL++ R D +T+ + + D M D++ Sbjct: 416 DFGLENYSFRLS--------------YRDPEDTKKYYADDEMWEKAQGMLKEAMDEMGLD 461 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y DV ++ +L +++ +S ++ F ++ + G Sbjct: 462 YYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERF----ELAYVGE 510 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DGK H + G + + + + +P +AP + +I + QV D Sbjct: 511 DGKQHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQAQVIPVSP--QVHLDYA 566 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +K+ L + G V D E+IG + A + P ++VG V+++ V ++ Sbjct: 567 KKVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQK 626 Query: 426 REDMSLEEVINYAS 439 E ++L+ ++ Sbjct: 627 SETIALDAFVDMIK 640 >gi|237800208|ref|ZP_04588669.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023065|gb|EGI03122.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 571 Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 121/279 (43%), Positives = 173/279 (62%), Gaps = 20/279 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M ++ Sbjct: 121 ELNSYKQLPINMYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADNASLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN---- 236 Y IF RLGLK P+ A++G IGG SHEF VLA++GE + + D+ E Sbjct: 181 YSNIFSRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVF-SNGSDYAANIEKAEAV 239 Query: 237 ---------------TDFDDIISLNSIVEQWTAPYAATS 260 D + ++ +VE + P T Sbjct: 240 PSEKTRPAATEELRLIDTPNTKTIAHLVEGFGLPIEKTV 278 Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 111/207 (53%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ K RGIEVGHIF GTKYS M Sbjct: 364 DDKHYFGVNWERDLPVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGTKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK + MG YGIG RVVAA IE + D GIIW D++APF+I+LI ++ Sbjct: 424 KCQVLGENGKPVNLAMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALIPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 R+A +K+YA L+ G +V DD + G +FA +L+G P +V+V + +++ + Sbjct: 484 DAVREATDKLYAELTAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRVVVSDRGLAEGNL 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K R + +++ +V+++ R Sbjct: 544 EYKSRTESQPQAIAVADVLSFIQGRVK 570 >gi|237740439|ref|ZP_04570920.1| threonyl-tRNA synthetase [Fusobacterium sp. 2_1_31] gi|229422456|gb|EEO37503.1| threonyl-tRNA synthetase [Fusobacterium sp. 2_1_31] Length = 637 Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 82/443 (18%), Positives = 164/443 (37%), Gaps = 41/443 (9%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R K+ + + RD L L I ++ G +LP G + + + R+E Sbjct: 226 RLKKHLKFMEEAEKRDHRKLGKDLELF--FISEYGPGFPFFLPKGMVFRNVLIDLWRKEH 283 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G +++ P + + +LW SG + +Y + M ++ ++ P + F+ Sbjct: 284 EKAGYLQLETPIMLNKELWEISGHWFNYRENMYT-SEIDELEFAIKPMNCPGGVLSFKHQ 342 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP ++ R E G+MR R F D++ F +TP+ + + Sbjct: 343 LHSYKDLPARLAELGKVHRHEFSGALHGLMRVRSFTQDDSHIF-MTPDQVQDEIIGVVNL 401 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 R + +L + + P S E D + D Sbjct: 402 IDRFYSKLFGFEYEIELSTKPEKAIGSQE-----------------IWDMAESALAGALD 444 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I A Y D K+ D++ + ++ F ++ Sbjct: 445 KLGRKYKINPGDGAFYGPKLDF---KIKDAIGRMWQCGTIQLD----FNLPERFD----V 493 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 T+ G DG+ H + G++ ++ + G +W V ++L + Sbjct: 494 TYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFPMWLAPVQVKVLTL------ND 547 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEI 418 C ++I +L ++G DD E IG + A+ P+Q+I+G V + +V I Sbjct: 548 ECIPYAKEIMDKLQELGIRAELDDRNETIGYKIREANGRYKIPMQLIIGKNEVENKEVNI 607 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + + SL++ +Y Sbjct: 608 RRFGSKDQFSKSLDDFYDYVVDE 630 >gi|114776996|ref|ZP_01452016.1| threonyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1] gi|114552517|gb|EAU54977.1| threonyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1] Length = 634 Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 71/434 (16%), Positives = 134/434 (30%), Gaps = 40/434 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD + L L + + + G+ W P G V IR G Sbjct: 230 YLTRLEEAEKRDHRKLAKSLDLF--HLQEEAPGMIFWHPKGWSVWQQVENEIRGVMRDNG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D + +EM ++ P + +F ++ SY Sbjct: 288 YQEIKTPQMVDRKLWEKSGHWDKFREEMFT-TSTENRDYAIKPMNCPCHIQVFNQNLHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F+ DA+ F T + + Sbjct: 347 RDLPLRLAEFGSCHRNEPSGTLHGLMRLRNFVQDDAHIFC-TEAQIQDEVCNFIDLTYDV 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + R G + + P + E D + + D Sbjct: 406 YKRFGFDDVIIFLSDRPEKRVGTDE-----------------QWDKAEAALHQALDSKGI 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ A + Sbjct: 449 EYGLNPGEGAFYGPKIEF---SLKDCLGRVWQCGTIQVDFSMPGKLD--------AEYVA 497 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ ++GK W V ++ D Sbjct: 498 EDSSRQTPVMLHRAILGSMERFIGILIEHYEGKFPFWLAPVQVVACNIT------DAQAD 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ + K G D E++G + L P ++ G + D + ++ Sbjct: 552 YVAEVTKSMHKAGFRAEMDLRNEKVGYKVRAHTLARVPYILVAGDREREDGTISVRDLSG 611 Query: 424 GIREDMSLEEVINY 437 S+++ I Sbjct: 612 QNLGTFSVDDWIAE 625 >gi|262044730|ref|ZP_06017778.1| proline-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259037920|gb|EEW39143.1| proline-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 572 Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 124/235 (52%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P D+E+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADSEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q ++LW ESGR++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELNSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDS-SDYAANIE 234 Score = 172 bits (436), Expect = 9e-41, Method: Composition-based stats. Identities = 70/189 (37%), Positives = 110/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ K + RGIEVGHIF GTKYS M A +G DG++ + MG Sbjct: 383 EVADIRNVVAGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSEAMKAAVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSK 374 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+YA LS Sbjct: 443 CYGIGVTRVVAAAIEQNFDDRGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELSA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++ Sbjct: 503 QGIEVLMDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDI 562 Query: 435 INYASHRFS 443 + Y Sbjct: 563 VEYLVKAIK 571 >gi|289207688|ref|YP_003459754.1| prolyl-tRNA synthetase [Thioalkalivibrio sp. K90mix] gi|288943319|gb|ADC71018.1| prolyl-tRNA synthetase [Thioalkalivibrio sp. K90mix] Length = 570 Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 122/233 (52%), Positives = 161/233 (69%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L L+E P DAEI SH+LMLR G + + + G+Y+WLPLG + L V I+REE Sbjct: 1 MRVSQFPLNTLKETPADAEIVSHQLMLRAGYVRRLAAGLYTWLPLGLRVLRRVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW ESGR+D YG E+LRL DR+++ +GPTHEEV+TD+ R Sbjct: 61 MNRAGALEVLMPAVQPAELWQESGRWDFYGAELLRLKDRHERDFCFGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR LP +YQIQ KFRDE RPRFG+MR+REFLMKDAYSF L + +Y +M + Sbjct: 121 EIRSYRQLPVNYYQIQTKFRDERRPRFGIMRAREFLMKDAYSFHLDADSLSRTYQQMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y RIF R GL + A++G IGG+ SHEF VLA +GE + S + Sbjct: 181 YCRIFERCGLDFRAVEADTGAIGGNASHEFHVLASSGEDAIAFSPGGYAANVE 233 Score = 156 bits (395), Expect = 6e-36, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 3/207 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLP 297 ++ L + + P +SD+ N + P+ RGIEVGHIF G KYS Sbjct: 363 ENGHHLKQVNWERDLPRPESSDLRNITEGEPAPDGSGPIEIRRGIEVGHIFQLGDKYSQA 422 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-A 356 + A DG++ V MG YGIG RVVAA IE + D +GI WP ++APF I+L I Sbjct: 423 LGARVLDEDGREQVVTMGCYGIGVSRVVAAAIEQNSDERGICWPTAIAPFDIALCPIGAK 482 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 Q R+A EK++ L G V DD ++ G FA +L+G P ++++G + + ++ Sbjct: 483 KSQRVREAAEKLHDELEAAGFQVLLDDREQRPGVMFADMELIGIPHRLVIGERGLDAGEL 542 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E + R E + ++ +++ R Sbjct: 543 EYQARTASEAEHLPMDGLLDALRERLQ 569 >gi|330975337|gb|EGH75403.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 571 Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 118/237 (49%), Positives = 164/237 (69%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E + +Y++M ++ Sbjct: 121 ELNSYKQLPINLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADHESLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF RLGLK P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSD-GSDYAANIEKA 236 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 112/207 (54%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ K RGIEVGHIF GTKYS M Sbjct: 364 DDKHYFGVNWERDLPVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGTKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK + MG YGIG RVVAA IE + D GIIW D++APF+I+L+ ++ Sbjct: 424 KCQVLGENGKPVNLAMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALVPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 R+A +K+YA L+ G +V DD + G +FA +L+G P +++V + +++ + Sbjct: 484 DAVREATDKLYADLTAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNL 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K R + +++ +V+++ + + Sbjct: 544 EYKSRTESQPQAIAVADVLSFIQGKVN 570 >gi|330968902|gb|EGH68968.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 571 Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 118/237 (49%), Positives = 164/237 (69%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E + +Y++M ++ Sbjct: 121 ELNSYKQLPINLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADHESLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF RLGLK P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSD-GSDYAANIEKA 236 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 112/207 (54%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ K RGIEVGHIF GTKYS M Sbjct: 364 DDKHYFGVNWERDLPVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGTKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK + MG YGIG RVVAA IE + D GIIW D++APF+I+L+ ++ Sbjct: 424 KCQVLGENGKPVNLAMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALVPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 R+A +K+YA L+ G +V DD + G +FA +L+G P +++V + +++ + Sbjct: 484 DAVREATDKLYADLTAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNL 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K R + +++ +V+++ + + Sbjct: 544 EYKSRTESQPQAIAVADVLSFIQGKVN 570 >gi|330950620|gb|EGH50880.1| prolyl-tRNA synthetase [Pseudomonas syringae Cit 7] Length = 571 Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 118/237 (49%), Positives = 164/237 (69%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E + +Y++M ++ Sbjct: 121 ELNSYKQLPINLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADHESLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF RLGLK P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSD-GSDYAANIEKA 236 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 112/207 (54%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ K RGIEVGHIF GTKYS M Sbjct: 364 DDKHYFGVNWERDLPVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGTKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK + MG YGIG RVVAA IE + D GIIW D++APF+I+L+ ++ Sbjct: 424 KCQVLGENGKPVNLAMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALVPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 R+A +K+YA L+ G +V DD + G +FA +L+G P +++V + +++ + Sbjct: 484 DAVREATDKLYADLTAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNL 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K R + +++ +V+++ + + Sbjct: 544 EYKSRTESQPQAIAVADVLSFIQGKVN 570 >gi|294634711|ref|ZP_06713243.1| proline--tRNA ligase [Edwardsiella tarda ATCC 23685] gi|291091887|gb|EFE24448.1| proline--tRNA ligase [Edwardsiella tarda ATCC 23685] Length = 572 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 147/412 (35%), Positives = 201/412 (48%), Gaps = 34/412 (8%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L+ V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLNKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNYAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EISSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTTQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--- 237 Y RIF R+GL ++A++G IGG+ SHEF VLA +GE + D+ E Sbjct: 181 YSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVF-STDSDYAANIELAEAI 239 Query: 238 -DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE--NKRVSARGIEVGHI------- 287 + +E P+A T E+ + + + E GH Sbjct: 240 APTAARAAATQAMELVDTPHAKTIAELVEQHNQPIEKTVKTLLVHAAEESGHTLVALLVR 299 Query: 288 --FYFGTKYSLP-----MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 + TF V G +G + + ++ + Sbjct: 300 GDHELNEVKAEKLELVATPLTFANEAEIRALVNAGPGSLGPVNLPLPIVVDRAVAAMSDF 359 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYA-------------RLSKVGCDV 379 I V I L K G +V Sbjct: 360 AAGANIDGKHYFGINWERDVALPQVADIRNVVEGDPSPDGHGTLLIKRGIEV 411 Score = 180 bits (457), Expect = 4e-43, Method: Composition-based stats. Identities = 71/188 (37%), Positives = 115/188 (61%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + RGIEVGHIF GTKY+ ++AT +G DG++ + MG Sbjct: 384 VADIRNVVEGDPSPDGHGTLLIKRGIEVGHIFQLGTKYTEALNATVQGEDGRNQLMTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKV 375 YGIG RVVAA IE +HD +GIIWPD++APF+++++ + H +D E++Y L Sbjct: 444 YGIGVTRVVAAAIEQNHDERGIIWPDAIAPFQVAILPMNMHKSFRVKDVAERLYDALRLK 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + +++VE K+R G + +SL+E+ Sbjct: 504 GIEVLLDDRKERPGVMFADMELIGIPYTIVIGDRNLDNNEVEYKYRRDGEKLMISLDEIE 563 Query: 436 NYASHRFS 443 + + + Sbjct: 564 AFLLAQIA 571 >gi|254491952|ref|ZP_05105130.1| prolyl-tRNA synthetase [Methylophaga thiooxidans DMS010] gi|224462767|gb|EEF79038.1| prolyl-tRNA synthetase [Methylophaga thiooxydans DMS010] Length = 569 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 121/235 (51%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S + L+E P DAEI SH+LMLR G+I + + G+Y+WLP+G K L AIIR+E Sbjct: 1 MRASNLLISTLKETPADAEIVSHQLMLRAGLIRRLASGLYTWLPMGLKVLRKTEAIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+ +P++Q ++LW ES R++ YG E+LR+ DR+ + YGPTHEEV+TD+ R Sbjct: 61 MDKAGAQEVLMPSVQPSELWQESQRWEKYGPELLRITDRHQREFCYGPTHEEVITDLVRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE+RPRFG+MR+REFLMKDAYSF L + +Y+ MF + Sbjct: 121 EIRSYKQLPINFYQIQTKFRDEIRPRFGLMRAREFLMKDAYSFHLDHASLQQTYDDMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R+GL P++A++G IGG+ SHEF VLA +GE + S D+ E Sbjct: 181 YSRIFSRIGLDFRPVQADTGSIGGNASHEFHVLASSGEDAIAFSDQ-SDYAANVE 234 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 112/207 (54%), Gaps = 3/207 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLP 297 DD L + T+D+ N D P+ + ARGIEVGHIF G YS Sbjct: 363 DDDKHLTGVNWGRDLAEPDTADLRNVVAGDPSPDGQGTLDIARGIEVGHIFQLGENYSSK 422 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 ++A GK + MG YGIG RVVAA IE ++D +GIIWP+++AP+++ L+ + AH Sbjct: 423 LNAVVLNETGKSQVITMGCYGIGVSRVVAAAIEQNNDDRGIIWPEAIAPYQVVLVPVNAH 482 Query: 358 DQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 V + E+IY +L G DV DD G + G FA +L+G P ++I+G + + + + Sbjct: 483 KSVRVKQKAEEIYQQLQAAGIDVLLDDRGLRPGVAFADMELIGIPHRLILGERGLDNGMI 542 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K R TG ++ +E VI + S Sbjct: 543 EYKSRRTGEGDEFPIESVIETIKQKLS 569 >gi|152975545|ref|YP_001375062.1| threonyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024297|gb|ABS22067.1| threonyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98] Length = 640 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 79/445 (17%), Positives = 154/445 (34%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 KY + + R+ ++L L M + + G+ +LP GQ + + +RE Q Sbjct: 232 LKKYLHFVEEAAKRNHRKLGNELELF--MFSEEAPGMPFYLPKGQIIRNELEGFLREIQQ 289 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + +LW +SG +D Y M ++ + K+ P + IF+ + Sbjct: 290 AYDYQEVRTPLMMNQELWEKSGHWDHYKDNM-YFSEVDHKSFALKPMNCPGHMLIFKHKL 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP + R E G++R R F DA+ + + + Sbjct: 349 RSYRDLPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAHIYVTAEQIESE-IQSVLKQI 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G + + P E A+ + Sbjct: 408 DYVYRTFGFEYEI-ELSTRPENSMGDDELWNQAEA-----------------ALENVLKS 449 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + I E A Y D H + D+L + + ++ F K+ L Sbjct: 450 LQYNYRINEGDGAFYGPKIDFH---IKDALKRSHQCGTVQLD----FQMPEKFDLH---- 498 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + + + +G+ A++ G W + I + N+ V Sbjct: 499 YIDEKNEKRRPVVIHRAVLGSFDRFLAILIEHFGGAFPAWLAPIQVKVIPVSNL-----V 553 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ++I + +V V D E++G + A + P +++G K + ++ V ++ Sbjct: 554 HDSYTKEIEDKFKQVDIRVERDIRNEKLGYKIRDAQIQKIPYVLVIGDKEMENASVNVRK 613 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 E +SL E I N Sbjct: 614 YGEENSEVVSLHEFIENLQIEIKNR 638 >gi|328957059|ref|YP_004374445.1| threonine--tRNA ligase [Carnobacterium sp. 17-4] gi|328673383|gb|AEB29429.1| threonine--tRNA ligase [Carnobacterium sp. 17-4] Length = 645 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 160/442 (36%), Gaps = 34/442 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L MI + G+ WLP G + I + + Sbjct: 231 FIKMREEAKLRDHRKLGKELDLF--MISPEVGSGLPFWLPKGATIRRTIERYIVDREISL 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D M + P + ++++ + Sbjct: 289 GYQHVYTPIMADVNLYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDVH 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ R E ++ + + + P+ + + + L Sbjct: 349 SYRELPIRIAELGQMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIEEEFKRTLELMLA 408 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDI 242 ++ + R D T+ + D + DD+ Sbjct: 409 VYGDFNITDYRFRLS--------------YRDPNNTEKYYDDDGMWEKAQTMLKAAMDDM 454 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV + ++ + +S ++ F ++ T+ Sbjct: 455 ELDYFEAEGEAAFYGPKLDVL---VKTAIGIEETLSTIQLD----FLLPERFD----LTY 503 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++++ + + G + + + + +P +AP + ++I + + Sbjct: 504 VGEDGENNHRPVVIHR-GIVSTMERFVAYLIEEYKGAFPTWLAPVQATIIPVNL--DMHT 560 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D +I +L +G V D+ E++G + + P Q++VG V D+ V ++ Sbjct: 561 DYAYEIKKQLESIGMRVDVDERNEKMGYKIRASQTQKIPYQLVVGDSEVQDNTVAVRKYG 620 Query: 423 TGIREDMSLEEVINYASHRFSN 444 E + L + I S N Sbjct: 621 EKATETIGLNDYIEKVSSEIKN 642 >gi|190575251|ref|YP_001973096.1| threonyl-tRNA synthetase [Stenotrophomonas maltophilia K279a] gi|229558456|sp|B2FN79|SYT_STRMK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|190013173|emb|CAQ46806.1| putative threonyl-tRNA synthetase [Stenotrophomonas maltophilia K279a] Length = 633 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 73/443 (16%), Positives = 143/443 (32%), Gaps = 41/443 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ + ++ ++E RD + L + + + G+ W P G V +R+ Sbjct: 227 KQLEAYIKRIEEAEMRDHRRIGKQQDLF--HLQEEAPGLVFWHPKGWALWQVVEQYMRKV 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +G E+ P + LW +SG +D+Y M + + P + +F Sbjct: 285 YRNSGYGEVRCPQILDVSLWKKSGHWDNYQDNMF-FTESEKRTYAVKPMNCPGHIQVFNQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 + SYR+LP + + R+E G++R R F D + F T + Sbjct: 344 GLHSYRDLPIRYGEFGSCHRNEPSGALHGILRVRGFTQDDGHVFC-TENQIESEVTAFHQ 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L ++ G I ++ P D + + Sbjct: 403 QALAVYQHFGFDEIQIKIALRPESR-----------------LGDDATWDKAEGALRSAL 445 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + A Y + H L D++ ++ ++ G Sbjct: 446 TACGVEWQELPGEGAFYGPKIEYH---LKDAIGRTWQLGTMQVDFMMPGRLG-------- 494 Query: 300 ATFKGAD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + + K H V + +G+M ++ H G+ W ++ Sbjct: 495 AEYVDENSQKKHPVMLHRAIVGSMERFLGILIEHHAGQFPAWLAPTQVVVANIT------ 548 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D + L++ G V D E+IG + L P +++G + + V + Sbjct: 549 DAQADYVSGVTKTLAEQGFRVSSDLRNEKIGYKIREHTLQRVPYLLVIGDREKENGAVAV 608 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + R MSL+ I Sbjct: 609 RTRSGEDLGSMSLQAFIERLHAE 631 >gi|171780136|ref|ZP_02921040.1| hypothetical protein STRINF_01924 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281484|gb|EDT46919.1| hypothetical protein STRINF_01924 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 697 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 79/445 (17%), Positives = 155/445 (34%), Gaps = 33/445 (7%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y + RD +L L MI + +G+ WLP G + I +++ + Sbjct: 280 YLKQRQEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPDGATIRRTLERYIVDKEVES 337 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIK 123 G + + P L S DL+ SG +D Y ++M D D + + P + +++ H+ Sbjct: 338 GYLHVYTPPLASVDLYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNCPHHIQVYKYHVH 397 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP +I + R E ++ + + +TPE + + K + Sbjct: 398 SYRELPIRIAEIGMMHRYEKSGALSGLQRVREMSLNDGHLFVTPEQIQEEFQKALQLIID 457 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ L R + + + + D++ Sbjct: 458 VYEDFNLTEYRFRLSLRD-------------PKDTHKYYDDDEMWENAQSMLKAALDEMG 504 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 E A Y D+ ++ +L + +S ++ F ++ T+ Sbjct: 505 VEYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERF----GLTYI 553 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 GADG++H M G+ + I + + I ++ D Sbjct: 554 GADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQV----TVIPVSNEAHVD 609 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +I L G V D+ E++ + + P Q+IVG K ++D V ++ + Sbjct: 610 YAWEIAKVLRDKGVRVDVDERNEKMQLKIRQSQTKKIPYQLIVGDKEMADKTVNVRRYGS 669 Query: 424 GIREDMSLEEVINYASHRF-SNNRP 447 S++E + +RP Sbjct: 670 KQTHTESIDEFVENILADIDRKSRP 694 >gi|308049557|ref|YP_003913123.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Ferrimonas balearica DSM 9799] gi|307631747|gb|ADN76049.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Ferrimonas balearica DSM 9799] Length = 644 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 80/447 (17%), Positives = 151/447 (33%), Gaps = 39/447 (8%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E RD L L + + G+ W G + +R++ Sbjct: 227 KQLKAYLQRLEEAAKRDHRKIGKALDLF--HWQEEAPGMVFWHNDGWTIYQELEGFMRKQ 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G E+ P + +W SG +D Y EM+ + + P + IF+ Sbjct: 285 LHKYGYEEVRTPLVMDKVMWERSGHWDKY-SEMIFATESEKRTYAVKPMNCPGHLQIFKQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP+ + L R+E G+MR R F DA+ F + Sbjct: 344 GLKSYRDLPYRMAEFGLVHRNEPSGSLHGLMRVRSFTQDDAHIFCTEEQILDE-VTSCIK 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + G + I ++ + P S D D S Sbjct: 403 MVYDTYKTFGFEEIEVKLSTRPEQR-----------------IGSDDLWDKAEKSLAEAL 445 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D + A Y + L D L + ++ F + Sbjct: 446 DANGLKYELQPGEGAFYGPKIEF---TLHDCLDRAWQCGTIQLD------FSMPQPERLD 496 Query: 300 ATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 ++ G D V + +G++ ++ + P +AP ++ ++NI + Sbjct: 497 VSYVGEDNSRKVPVMIHRAILGSLERFIGILI---EEYAGKLPTWLAPTQVQVMNITDN- 552 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D ++ L+ G D E+IG + L P ++ G + + + ++ I Sbjct: 553 --QADYVRQVVEMLNDQGIRAKADLRNEKIGFKIREHTLKRVPYLLVCGDQEMENGEIAI 610 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R M LE+ + Sbjct: 611 RTRNGVDLGKMKLEQFAAAVAQEIRTR 637 >gi|332297469|ref|YP_004439391.1| threonyl-tRNA synthetase [Treponema brennaborense DSM 12168] gi|332180572|gb|AEE16260.1| threonyl-tRNA synthetase [Treponema brennaborense DSM 12168] Length = 583 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 148/444 (33%), Gaps = 37/444 (8%) Query: 5 KYFLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K ++ +L + RD ++ L I + S G W P G + +R + Sbjct: 170 KAYVDMLAEAERRDHRKIGKEMDLF--HIDEDSPGQIFWHPNGWTIYRILEDYVRTKIKA 227 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G +E+ P + LW SG + Y + M + + + P + +IF+ I+ Sbjct: 228 DGYVEVKTPFVMPQSLWERSGHWAKYKENMF-ITESEKRIFALKPMNCPGHIEIFKQRIR 286 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP + R+E G+MR R F+ DA+ F + Sbjct: 287 SYKDLPLRMAEFGSCTRNEASGALHGIMRVRGFVQDDAHIFCTEAQIPSEV--------- 337 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 K + + G + +V T + D + Sbjct: 338 -------AKFCHLLKDMYKDFGFTDDKILVKFSTRPEKRVGDDATWDRAEGALADACKQA 390 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I A Y + L D+L + ++ + ++A + Sbjct: 391 GLAYEIQPGEGAFYGPKLEF---TLVDALGREWQCGTIQVDYQLP------SAERLNAEY 441 Query: 303 KGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G D K H V + +G++ ++ + G W I + Sbjct: 442 IGDDNAKHHPVMLHRAVLGSLERFIGILIENFAGAFPTWLHYQQTVVIPVAP------AF 495 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 EK+ A L G D +++ ++ +A P ++VG K +D V ++ R Sbjct: 496 NGYAEKVQAALKAAGIRSDCDLGNDRMNAKIRLAQTQKIPYMLVVGEKEAADGTVAVRFR 555 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 ++ MS+ + Y N+ Sbjct: 556 DGRPQQIMSVGDFTAYVRETVENH 579 >gi|297530568|ref|YP_003671843.1| prolyl-tRNA synthetase [Geobacillus sp. C56-T3] gi|297253820|gb|ADI27266.1| prolyl-tRNA synthetase [Geobacillus sp. C56-T3] Length = 567 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 121/235 (51%), Positives = 163/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ F+P L+E P DAE+ SH+L+LR G I Q + G+Y++LPLGQ+ L V AIIREE Sbjct: 1 MRQSQAFIPTLREVPADAEVKSHQLLLRAGFIRQSASGVYTFLPLGQRVLQKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P LQ A+LW +SGR+ SYG E++RL DR+++ GPTHEE++T I R Sbjct: 61 MNRIGAMELFMPALQPAELWQQSGRWYSYGPELMRLKDRHERDFALGPTHEEMITAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +K+Y+ LP YQIQ KFRDE RPRFG++R REF+MKDAYSF + E +YN M+ + Sbjct: 121 EVKTYKRLPLVLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHTSKESLDETYNNMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL + A+SG IGG +HEF+VL+D GE + S D+ E Sbjct: 181 YANIFRRCGLNFRAVIADSGAIGGKDTHEFMVLSDIGEDTIAYSD-ASDYAANIE 234 Score = 170 bits (430), Expect = 5e-40, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 106/197 (53%), Gaps = 3/197 (1%) Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADG 307 + +D+ K D P+ K RGIEVGH+F GTKYS M+A + +G Sbjct: 372 PGRDFAVSQYADLRFVKEGDPSPDGKGTIRFARGIEVGHVFKLGTKYSEAMNAVYLDENG 431 Query: 308 KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + + MG YGIG R+VAA+ E D G++WP SVAPF I L+ A E+ Sbjct: 432 QTQTMIMGCYGIGVSRLVAAIAEQFADEHGLVWPASVAPFHIHLLTANAKSDEQHALAEE 491 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 Y +L + G +V +DD E+ G +FA +DL+G PL+V VG + + VE+K R TG Sbjct: 492 WYEKLGQAGFEVLYDDRPERAGVKFADSDLIGIPLRVTVGKR-AGEGVVEVKVRKTGETF 550 Query: 428 DMSLEEVINYASHRFSN 444 D+ + E+++ A + Sbjct: 551 DVPVSELVDTARRLLQS 567 >gi|120602767|ref|YP_967167.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris DP4] gi|152112308|sp|A1VE74|SYP_DESVV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|120562996|gb|ABM28740.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris DP4] Length = 574 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 127/237 (53%), Positives = 167/237 (70%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ ++P L+E P DAE+ SHKL++R GMI + + GIY+++P+G +AL+ V AI+REE Sbjct: 1 MRWSRCYIPTLKEAPSDAEVVSHKLLVRAGMIRKLTSGIYTFMPMGLRALNKVAAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P +Q ADLW E+GR++ YGKE+LR DRND+ GPTHEEV+TD+ R Sbjct: 61 MNRAGAQEVLMPMVQPADLWQETGRWEFYGKELLRFRDRNDRDYCLGPTHEEVITDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD G SY M+ + Sbjct: 121 EVRSYRQLPINLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFDRDQAGCDESYKAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF RLGL+ + A+SG IGG SHEF+VLADTGE + ++ E Sbjct: 181 YQRIFSRLGLRFRAVEADSGSIGGSFSHEFMVLADTGEDTLAVCTAC-EYAANVERA 236 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 66/190 (34%), Positives = 104/190 (54%), Gaps = 2/190 (1%) Query: 253 TAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A A +D+ D P +GIEVGH+F G KYS M+ATF +GK+ Sbjct: 374 DAAIEAYADLRMITASDPCPRCGGAVELPKGIEVGHVFKLGLKYSKSMNATFLDENGKEQ 433 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + MG YGIG RVVA+ IE ++DG GI++P +AP++++L+ + ++ +I + Sbjct: 434 VMVMGCYGIGVSRVVASCIEQNNDGDGIVFPPPIAPYEVALLLLDPKNEEAAAKAAEIES 493 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L G DV DD E+ G +F ADL+G P Q+++G K ++ VE K+R +G + ++ Sbjct: 494 FLEAEGHDVLLDDRDERPGVKFKDADLIGSPYQLVLGGKGLARGVVEAKNRRSGEKTELP 553 Query: 431 LEEVINYASH 440 +E Sbjct: 554 VEGFAEAFRD 563 >gi|310764925|gb|ADP09875.1| prolyl-tRNA synthetase [Erwinia sp. Ejp617] Length = 572 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 120/235 (51%), Positives = 164/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LRL DR+D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRLVDRSDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQGSLQETYDAMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y + F R+GL ++A++G IGG+ SHEF VLA +GE + D+ E Sbjct: 181 YSQSFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVF-STGSDYAANIE 234 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 69/192 (35%), Positives = 109/192 (56%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ K RGIEVGHIF GTKYS M A+ +G DG++ + Sbjct: 380 PLPRIADIRNVVEGDASPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKASVQGEDGRNQIL 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYAR 371 MG YGIG R+VAA IE +HD +GIIW ++APF+++++ + ++ E++Y + Sbjct: 440 TMGCYGIGITRIVAAAIEQNHDERGIIWSPALAPFQVAILPMNMQKSFRVKELAEELYHQ 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P V++G + + ++E K R G + M Sbjct: 500 LRAKGIDVILDDRKERPGVMFADMELIGVPHTVVIGERNLDSEEIEYKSRRAGEKRMMKT 559 Query: 432 EEVINYASHRFS 443 E++++ + Sbjct: 560 NEIVDFLVAELA 571 >gi|259907567|ref|YP_002647923.1| prolyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96] gi|224963189|emb|CAX54673.1| Prolyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96] gi|283477409|emb|CAY73325.1| proS [Erwinia pyrifoliae DSM 12163] Length = 572 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 120/235 (51%), Positives = 164/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LRL DR+D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRLVDRSDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQGSLQETYDAMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y + F R+GL ++A++G IGG+ SHEF VLA +GE + D+ E Sbjct: 181 YSQSFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVF-STGSDYAANIE 234 Score = 180 bits (457), Expect = 4e-43, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 109/192 (56%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ K RGIEVGHIF GTKYS M A+ +G DG++ + Sbjct: 380 PLPRIADIRNVVEGDASPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKASVQGEDGRNQIL 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYAR 371 MG YGIG R+VAA IE +HD +GIIW ++APF+++++ + ++ E++Y + Sbjct: 440 TMGCYGIGITRIVAAAIEQNHDERGIIWSPALAPFQVAILPMNMQKSFRVKELAEELYHQ 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P V++G + + +VE K R G + M Sbjct: 500 LRAKGIDVILDDRKERPGVMFADMELIGIPHTVVIGERNLDSEEVEYKSRRAGEKRMMKT 559 Query: 432 EEVINYASHRFS 443 E++++ + Sbjct: 560 NEIVDFLVAELA 571 >gi|312962836|ref|ZP_07777323.1| prolyl-tRNA synthetase [Pseudomonas fluorescens WH6] gi|311282863|gb|EFQ61457.1| prolyl-tRNA synthetase [Pseudomonas fluorescens WH6] Length = 571 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 116/237 (48%), Positives = 160/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DA + SH+LMLR GMI + + G+Y+WLP+G K + V AI+REE Sbjct: 1 MRTSQYLLATQKETPSDAVVISHQLMLRAGMIRKLASGLYTWLPMGLKVMRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N G++E+ +P+ Q A+LW ESGR++ YG E+LR DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNAAGSLEVLMPSTQPAELWQESGRWEEYGPELLRFKDRHGRDFCAGPTHEEVITDLMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M + Sbjct: 121 ELSSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQVTYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y +F RLGLK P+ A++G IGG SHEF VLA++GE + + D+ E Sbjct: 181 YCNVFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVF-SNGSDYAANIEKA 236 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 112/207 (54%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ K RGIEVGHIF G KYS M Sbjct: 364 DDKHYFGVNWERDLPVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGNKYSKAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK + MG YGIG RVVAA IE ++D KGIIW D++APF+++L+ ++ Sbjct: 424 KCEVLGENGKPITLDMGCYGIGVSRVVAAAIEQNNDDKGIIWSDALAPFQVALVPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + R+A +K+YA L+ G +V DD + G +FA +L+G P +++V + ++D + Sbjct: 484 EQVREATDKLYAELTAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLADGNL 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K R + + + +V+++ R Sbjct: 544 EYKSRTEAEAQPLPVADVLSFLQARIR 570 >gi|254447322|ref|ZP_05060789.1| threonyl-tRNA synthetase [gamma proteobacterium HTCC5015] gi|198263461|gb|EDY87739.1| threonyl-tRNA synthetase [gamma proteobacterium HTCC5015] Length = 637 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 75/438 (17%), Positives = 150/438 (34%), Gaps = 41/438 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD + L L + + + G+ W G + V IR+ + Sbjct: 229 KAHLTMLEEAEKRDHRKLAKSLDLF--HMQEEAPGMVFWHDKGWQIYVQVQDYIRQLLRQ 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P + LW +SG +D + +M+ ++ P + I+ +K Sbjct: 287 HDYQEVHTPQVVDRVLWEKSGHWDKF-GDMIFSTHSENRDYAVKPMNCPCHVQIYNQGLK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F+ DA+ F + + Sbjct: 346 SYRDLPLRMAEFGSCHRNEPSGTLHGLMRVRNFVQDDAHIFCTEDQIQSE-VSAFIDLVF 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +++ G + + + + P D + ++ Sbjct: 405 QVYKDFGFEEVQVALSTRPEER-----------------VGEDALWDKAENALEVALNNK 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 ++ A Y + L D L + ++ F T+ + A + Sbjct: 448 DLDFTLQPGEGAFYGPKIEF---ALKDCLGRVWQCGTIQVD----FSMPTR----LEADY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 DG + +G++ ++ + +P +AP + +++NI Sbjct: 497 VAEDGSRKTPVMLHRAILGSLERFIGILI---EEHEGRFPVWLAPVQAAILNITDKQADF 553 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + L G V D E+IG + L P +VG + V + V ++ R Sbjct: 554 VEKARQ---TLENQGLRVVSDLRNEKIGFKIREHTLQRVPYLFVVGDREVENESVAVRTR 610 Query: 422 LTGIREDMSLEEVINYAS 439 M+++E + Sbjct: 611 SGEDLGTMTVDEAVQLIK 628 >gi|134282011|ref|ZP_01768717.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 305] gi|134246540|gb|EBA46628.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 305] Length = 681 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 73/437 (16%), Positives = 144/437 (32%), Gaps = 39/437 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + G W P G + A +R Q G Sbjct: 243 YIQRMEEAEKRDHRKLGRELDLF--HFQEDAPGAVFWHPRGWAVFQELIAYMRRRQQDAG 300 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E++ P + LW SG + +Y M + +A+ P + ++R +KSY Sbjct: 301 YVEVNSPDVMDRSLWEISGHWQNYRDHMFTTETEDGRALALKPMNCPGSALLYRHGLKSY 360 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R E G++R R F DA+ + TP+ ++ L I Sbjct: 361 RDLPIRMGEFGKVHRYEPSGSLHGLLRVRHFTQDDAHIYC-TPQQMDAECREVVTLVLDI 419 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ + P + D + + + Sbjct: 420 YRQFGFDEVRIKLSTRPENR-----------------MGTDATWDQLEGTLVQALEGMGL 462 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D++ + + +++ FG + Sbjct: 463 QYHLKPGEGAFYGPKLEF---VLRDAIGRDWQCGTLQVDMNLPERFG--------IEYVD 511 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ + G++ ++ H G+ +W + +S+ + Sbjct: 512 EDGQRKRPVMLHRALFGSLERFTGILIEHHAGRLPVWLAPLQAIVLSIT------EAHGA 565 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L G D E IG + L P ++VG+K V I+ R Sbjct: 566 YAQDVARLLRGAGLRAEADIRNETIGYKIREQTLQRIPFLLVVGAKERDAGAVAIRTRNG 625 Query: 424 GIREDMSLEEVINYASH 440 + L + + Sbjct: 626 DDLGVLPLTQAVARLLQ 642 >gi|296327515|ref|ZP_06870061.1| threonine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296155341|gb|EFG96112.1| threonine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 637 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 80/443 (18%), Positives = 161/443 (36%), Gaps = 41/443 (9%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R + + + RD +L L + ++ G +LP G + + + R E Sbjct: 226 RLKHHLKLMEEAEKRDHRKLGKELELF--FLSEYGPGFPFFLPKGMIVRNVLIDLWRREH 283 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G ++ P + + +LW SG + +Y + M ++ ++ P + F+ Sbjct: 284 EKAGYQQLETPIMLNKELWEISGHWFNYRENMYT-SEIDELEFAIKPMNCPGGVLAFKHQ 342 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP ++ R E G+MR R F D++ F +TP+ + + Sbjct: 343 LHSYKDLPARLAELGRVHRHEFSGALHGLMRVRSFTQDDSHIF-MTPDQVQDEIIGVVNL 401 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + + +L + + P S E D + D Sbjct: 402 IDKFYSKLFGFEYEIELSTKPEKAIGSQE-----------------IWDMAEAALAGALD 444 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I A Y D K+ D++ + ++ F ++ Sbjct: 445 KLGRKYKINPGDGAFYGPKLDF---KIKDAIGRMWQCGTIQLD----FNLPERFD----V 493 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 T+ G DG+ H + G++ ++ + G +W V ++L + Sbjct: 494 TYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFPMWLAPVQVKVLTL------ND 547 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEI 418 C ++I +L ++G DD E IG + A+ P+Q+I+G V + +V I Sbjct: 548 ECIPYAKEIMNKLEELGIRAELDDRNETIGYKIREANGKYKIPMQLIIGKNEVENKEVNI 607 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + + SL+E Y Sbjct: 608 RRFGSKDQFSKSLDEFYTYVVDE 630 >gi|300722778|ref|YP_003712069.1| threonine tRNA synthetase [Xenorhabdus nematophila ATCC 19061] gi|297629286|emb|CBJ89885.1| threonine tRNA synthetase [Xenorhabdus nematophila ATCC 19061] Length = 642 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 69/442 (15%), Positives = 144/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + + G+ W G + +R + Sbjct: 232 YLQRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMAFWHNDGWTIFRELETFVRTKLKEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + +W ++G +++Y + M ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRIMWEKTGHWENYKENMFT-TSSENREYCVKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + + + + Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQILQE-VSSCIKMIYDV 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P + + A+ + P E Sbjct: 408 YGTFGFEKIVVKLSTRPEKRIGTEKQWDEAEADLAKALTQNSIEFEYQPGE--------- 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L+D L + ++ F + S A++ G Sbjct: 459 --------GAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPARLS----ASYVG 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + V + +G++ ++ + G W +++ + Sbjct: 500 ENNERKVPVMIHRAVLGSLERFIGILTEEYAGFFPTWLAPQQVVVMNIT------DGQSN 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +L VG D E+IG + L P ++ G K V KV ++ R Sbjct: 554 YVQELVKKLQDVGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVSVRTRRG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + E + Sbjct: 614 KDLGSIDVSEFTEKLLTEIRSR 635 >gi|229163567|ref|ZP_04291517.1| Threonyl-tRNA synthetase [Bacillus cereus R309803] gi|228619949|gb|EEK76825.1| Threonyl-tRNA synthetase [Bacillus cereus R309803] Length = 646 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 79/433 (18%), Positives = 166/433 (38%), Gaps = 30/433 (6%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L T + +G+ WLP G + I +++ G Sbjct: 238 LRMLEEAKERDHRKLGKELKLFTN-SQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGY 296 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG ++ Y M + +++ ++ P + ++++ I SYR Sbjct: 297 DHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYR 356 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K ++ L ++ Sbjct: 357 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYK 416 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 GL++ R + ADT + + + + D++ Sbjct: 417 DFGLENYSFRLS-----------YRDPADTK--KYYADDEMWEKAQGMLKEAMDEMGLDY 463 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y DV ++ +L +++ +S ++ F ++ + G D Sbjct: 464 YEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERF----ELAYVGED 512 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 GK H + G + + + + +P +AP + +I + QV D + Sbjct: 513 GKQHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQAQVIPVSP--QVHLDYAK 568 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+ L + G V D E+IG + A + P ++VG V+++ V ++ Sbjct: 569 KVQDELRRAGIRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKS 628 Query: 427 EDMSLEEVINYAS 439 E ++L ++ Sbjct: 629 ETIALAAFVDMIK 641 >gi|198284332|ref|YP_002220653.1| threonyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666034|ref|YP_002426993.1| threonyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270] gi|259516307|sp|B7J7T0|SYT_ACIF2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|259516338|sp|B5EN57|SYT_ACIF5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|198248853|gb|ACH84446.1| threonyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518247|gb|ACK78833.1| threonyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 644 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 76/437 (17%), Positives = 146/437 (33%), Gaps = 38/437 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y + + RD +L L + I + G+ W P+G + + +E Sbjct: 231 YLQQLAEAEKRDHRRIGTELELFS--IQEDAGGGLVFWHPMGSRVRRVIEDFWKEAHVEA 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + LW SG D Y + M +A P + I++ + S Sbjct: 289 GYDLLYTPHIAHEQLWYTSGHKDFYSESMFDPMQDEGQAYQLKPMNCPFHILIYKDKLHS 348 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + ++ +R E+ G+MR R F DA+ F P+ + + V + Sbjct: 349 YRDLPIRWAELGTVYRHEMSGALHGLMRVRGFTQDDAHVFCR-PDQIEAEIGAVLVLVRK 407 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I G + + P S E D + + Sbjct: 408 ILGTFGFDQYEINLSTRPGHSVGSDE-----------------IWDAATQALRNALERAG 450 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y D+ K+ D++ + S ++ F ++++ A Sbjct: 451 LEYQVDAGGGAFYGPKIDL---KIQDAIGRKWQCSTVQLD----FNLPERFAMEYVAE-- 501 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + G++ V+ ++GK +W V + + + + Sbjct: 502 -DGARKVPIMVHRAIFGSIERFFGVLIEHYEGKFPVWLAPVQAVVLPI------SEHYSE 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E + L K G D E+IG + L P ++VG + V ++ R Sbjct: 555 YAESVSDVLVKRGIRAETDLRNEKIGYKIRAHTLRRVPYLLVVGEREKEAGTVAVRDRNG 614 Query: 424 GIREDMSLEEVINYASH 440 +S++ V Sbjct: 615 QDLGTLSIDAVGATLQK 631 >gi|143764|gb|AAA22863.1| threonyl-tRNA synthetase (thrS2) (EC 6.1.1.3) [Bacillus subtilis] Length = 638 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 145/442 (32%), Gaps = 44/442 (9%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L M + + G+ +LP GQ + + RE Q G Sbjct: 235 LHMLEEAAKRDHRKLGKQLGLF--MFSEEAPGMPFYLPKGQIVRNELERFSRELQTNAGY 292 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + + LW +SG +D Y M ++ +D P + IF++ + SYR Sbjct: 293 DEVRTPFMMNQRLWEQSGHWDHYRDNM-YFSEVDDTRFAMKPMNCPGHMLIFKNSLYSYR 351 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R E G++R R F DA+ F + + + Sbjct: 352 DLPIRMAEFGQVHRHEYSGALNGMLRVRTFCQDDAHIFVREDQIESEIKEAIRLI----- 406 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + E+ V T + + +++ Sbjct: 407 --------------DEVYRTFGFEYSVELSTRPEDSLGDDSLWEASERALARVLEELGLS 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y D H + D+L + + + ++ F K+ T+ Sbjct: 453 YEINEGDGAFYGPKIDFH---IKDALKRSHQCATIQLD----FQMPEKFD----LTYINE 501 Query: 306 DGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + R +IE + V D Sbjct: 502 LNEKVRPVVIHRAVFGSIDRFFGILIEHYGGAFPVWLAPIQVQIIPV-------SHVHLD 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C K+ A L + G D+ E++G + + + P +++G ++ V ++ Sbjct: 555 YCRKVQAELKQAGIRAGIDERNEKLGYKIRESQVQKIPYVLVLGDHEEQENAVNVRRFGH 614 Query: 424 GIREDMSLEEVINYASHRFSNN 445 E + + + + N Sbjct: 615 QQNEHVPFQTFKDKLVKQVENR 636 >gi|309389087|gb|ADO76967.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Halanaerobium praevalens DSM 2228] Length = 643 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 78/443 (17%), Positives = 145/443 (32%), Gaps = 41/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 KY + + RD +L L + + +G + P G + + +EE + Sbjct: 231 KYLNRVEEAKKRDHRKLGKELDLFS--MQDEGRGFPFFHPKGMALRNALVDFWKEEHYQA 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + LW +SG +D Y M +++A P + +++ + S Sbjct: 289 GYEEIQTPIILDESLWHQSGHWDHYQDNM-YFTKIDEEAHAVKPMNCPGGILVYKDSMHS 347 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP ++ L R E+ G+MR R F DA+ + L P + + + + Sbjct: 348 YRELPIRMAELGLVHRHEMSGALHGLMRVRSFTQDDAHIYCL-PSQIETELSGVIKLVDK 406 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I+ G V T + + + + Sbjct: 407 IYSAFGFNYN------------------VELSTKPEKAMGDDALWNKATDALQNAIEKNN 448 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y D H E DSL + ++ F ++ + Sbjct: 449 LDYEVNAGDGAFYGPKIDFHLE---DSLGRTWQCGTIQLD----FQMPERFD----LNYI 497 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++H + G++ ++ G W + I Sbjct: 498 GQDGEEHRPVMIHRAIYGSIERFIGILIEHFAGAFPTW------MAPVQVEIIPVSDDQI 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D ++ L + V D E++G + A + P +IVGS+ + V ++ R Sbjct: 552 DYAMQVKEELKQEKIRVEVDSRSEKVGYKIRDAQVKQVPYMLIVGSREEDNGTVSVRDRR 611 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 G +L E + Sbjct: 612 EGDLGTSNLAEFKENILEEIAAK 634 >gi|221311719|ref|ZP_03593566.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221316045|ref|ZP_03597850.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320956|ref|ZP_03602250.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. JH642] gi|221325241|ref|ZP_03606535.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY] gi|255767793|ref|NP_391636.2| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|254763338|sp|P18256|SYT2_BACSU RecName: Full=Threonyl-tRNA synthetase 2; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|225185421|emb|CAB15783.2| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] Length = 638 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 145/442 (32%), Gaps = 44/442 (9%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L M + + G+ +LP GQ + + RE Q G Sbjct: 235 LHMLEEAAKRDHRKLGKQLGLF--MFSEEAPGMPFYLPKGQIVRNELERFSRELQTNAGY 292 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + + LW +SG +D Y M ++ +D P + IF++ + SYR Sbjct: 293 DEVRTPFMMNQRLWEQSGHWDHYRDNM-YFSEVDDTRFAMKPMNCPGHMLIFKNSLYSYR 351 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R E G++R R F DA+ F + + + Sbjct: 352 DLPIRMAEFGQVHRHEYSGALNGMLRVRTFCQDDAHIFVREDQIESEIKEAIRLI----- 406 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + E+ V T + + +++ Sbjct: 407 --------------DEVYRTFGFEYSVELSTRPEDSLGDDSLWEASERALARVLEELGLS 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y D H + D+L + + + ++ F K+ T+ Sbjct: 453 YEINEGDGAFYGPKIDFH---IKDALKRSHQCATIQLD----FQMPEKFD----LTYINE 501 Query: 306 DGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + R +IE + V D Sbjct: 502 LNEKVRPVVIHRAVFGSIDRFFGILIEHYGGAFPVWLAPIQVQIIPV-------SHVHLD 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C K+ A L + G D+ E++G + + + P +++G ++ V ++ Sbjct: 555 YCRKVQAELKQAGIRAGIDERNEKLGYKIRESQVQKIPYVLVLGDHEEQENAVNVRRFGH 614 Query: 424 GIREDMSLEEVINYASHRFSNN 445 E + + + + N Sbjct: 615 QQNEHVPFQTFKDKLVKQVENR 636 >gi|254522893|ref|ZP_05134948.1| threonyl-tRNA synthetase [Stenotrophomonas sp. SKA14] gi|219720484|gb|EED39009.1| threonyl-tRNA synthetase [Stenotrophomonas sp. SKA14] Length = 633 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 73/443 (16%), Positives = 144/443 (32%), Gaps = 41/443 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ + ++ ++E RD + L + + + G+ W P G V +R+ Sbjct: 227 KQLEAYIKRIEEAEMRDHRRIGKQQDLF--HLQEEAPGLVFWHPKGWALWQVVEQYMRKV 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +TG E+ P + LW +SG +D+Y M + + P + +F Sbjct: 285 YRKTGYGEVRCPQILDVSLWQKSGHWDNYQDAMF-FTESEKRTYALKPMNCPGHVQVFNQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 + SYR+LP + + R+E G++R R F D + F T + Sbjct: 344 GLHSYRDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFC-TENQVEAEVTAFHQ 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L ++ G I ++ P D + + Sbjct: 403 QALAVYQHFGFDEIQVKIALRPESR-----------------LGDDATWDKAEGALRSAL 445 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + A Y + H L D++ ++ ++ G Sbjct: 446 SSNGVEWQELPGEGAFYGPKIEYH---LKDAIGRTWQLGTMQVDFMMPGRLG-------- 494 Query: 300 ATFKGAD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + + K H V + +G+M ++ H G+ W ++ Sbjct: 495 AEYVDENSQKKHPVMLHRAIVGSMERFLGILIEHHAGQFPAWLAPTQVVVANIT------ 548 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + + L++ G V D E+IG + L P +++G + + V + Sbjct: 549 DAQAEYVSGVTKTLAEQGFRVSSDLRNEKIGYKIREHTLQRVPYLLVIGDREKENGAVAV 608 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + R MSL+ I Sbjct: 609 RTRSGEDLGSMSLQAFIERLHAE 631 >gi|307244344|ref|ZP_07526458.1| threonine--tRNA ligase [Peptostreptococcus stomatis DSM 17678] gi|306492310|gb|EFM64349.1| threonine--tRNA ligase [Peptostreptococcus stomatis DSM 17678] Length = 664 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 77/441 (17%), Positives = 157/441 (35%), Gaps = 41/441 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L MI G +LP G + E Sbjct: 255 LFMLEEAKKRDHRKIGKELGLF--MIPDEGPGFPLFLPRGTALKAALMKYWEEVHREAHY 312 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 +E+ P + + LW SG + Y + M + +++ P + ++S + SYR Sbjct: 313 VEIETPIILNRKLWETSGHWFHYKENMYTVQ-IDEEDYAIKPMNCPGAMLFYKSQLHSYR 371 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 + P + R EL G+MR R F DA+ + L + ++ +++ Sbjct: 372 DFPMRVGERGRVHRHELSGALHGLMRVRAFTQDDAHIYCLPDQIRSE-VKEVINLIDKVY 430 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + G + + P + E +A+ G +++ Sbjct: 431 KQFGFSYH-VELSTRPEDSMGTDEEWAIAEDG-----------------LRGALEEMGME 472 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + E A Y D H L D L + +++ ++ AT+ G Sbjct: 473 YRVNEGDGAFYGPKIDFH---LKDCLGRTWQCGTCQLDM----QLPQRFD----ATYVGK 521 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H + +G++ ++ ++ GK +W + + + D Sbjct: 522 DGEKHRPVMLHRVALGSIERFIGILIENYAGKFPVW------LAPCQVKVLSVSDKYNDF 575 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ +L G V D E++G + A L P ++VG K + + ++ R G Sbjct: 576 AKELQDKLFDAGIRVELDYRAEKVGFKIREAQLEKIPYMLVVGEKEMESCLLSVRSRDEG 635 Query: 425 IREDMSLEEVINYASHRFSNN 445 MS+E+ + + + ++ Sbjct: 636 ELGQMSVEDFLAKINKQIADR 656 >gi|187607298|ref|NP_001120088.1| prolyl-tRNA synthetase 2, mitochondrial (putative) [Xenopus (Silurana) tropicalis] gi|165971208|gb|AAI58530.1| LOC100145097 protein [Xenopus (Silurana) tropicalis] Length = 466 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 144/458 (31%), Positives = 220/458 (48%), Gaps = 50/458 (10%) Query: 3 RSKYFLPI---------LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNV 53 S+ + P + P + S KLM++ G+I S G + +LP +A++ + Sbjct: 33 LSRLYQPRSLWEVKASETEAKPNEPTSKSQKLMIKAGLIRPSSPGCFHYLPFTVRAMEKL 92 Query: 54 NAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEV 113 +I +E G ++ +PTL SA LW +SGR+D GKE+ RL DR+++ GPTHEE Sbjct: 93 IRLIDKEMQDIGGQKIDMPTLSSAALWRQSGRWDLMGKELFRLMDRHNQEYCLGPTHEEA 152 Query: 114 MTDIFRSH-IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKH 172 +T + S + + LP YQI KFRDE RP FG++R REF MKD Y+FD++ E + Sbjct: 153 VTHLVASEGGINNKELPLLLYQITRKFRDEQRPCFGLLRGREFYMKDMYTFDISDESAYE 212 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 +Y + +Y IF LG++ + ++A++G IGG +SHEF + A+ GE ++ DF Sbjct: 213 TYRNVCDAYTNIFRALGVRFVKVQADTGNIGGKMSHEFHLPANIGEDRLLVCGSC-DFSA 271 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 E HNEK + +GIE+GH FY GT Sbjct: 272 NVELLQ------------------------HNEKNCPVCT-GQLKETKGIEIGHTFYLGT 306 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 KYS AT + +MG YGIG R++AA +E I WP +AP+++ LI Sbjct: 307 KYSHVFKATCYDSQKTPFIAEMGCYGIGVSRLLAASLEVLSKEDDIHWPGLIAPYQVCLI 366 Query: 353 NIKA--HDQVCRDACEKIYAR-------LSKVGCDVFWDDMG-EQIGSQFAVADLLGFPL 402 + K + E +Y L + DD IG + A + G+P Sbjct: 367 SPKKGSKESEAITISETLYDEIIQSVPWLRD---ETVLDDRSYLTIGKRVKEAHMTGYPY 423 Query: 403 QVIVGSKFVSDSKV-EIKHRLTGIREDMSLEEVINYAS 439 ++VG K + + E++ T S E VI++ Sbjct: 424 IIVVGKKALETPSLFEVRSHNTDEVHFFSREGVIDFLQ 461 >gi|229060032|ref|ZP_04197403.1| Threonyl-tRNA synthetase [Bacillus cereus AH603] gi|228719251|gb|EEL70859.1| Threonyl-tRNA synthetase [Bacillus cereus AH603] Length = 639 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 74/444 (16%), Positives = 152/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 K+ + + R+ +L L M + + G+ +LP GQ + + A +R QN Sbjct: 234 KHLHFVEEAAKRNHRKLGSELELF--MFSEEAPGMPFYLPKGQIIRNELEAFLRGIQNEY 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + +LW +SG + Y M ++ + K+ P + +F+ + S Sbjct: 292 NYQEVRTPFMMNQELWEKSGHWGHYKDNM-YFSEVDHKSFALKPMNCPGHMLMFKYKLHS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R E G++R R F DA+ +TPE + + Sbjct: 351 YRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMAQIDY 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G E+ V T + + Sbjct: 410 VYKTFG------------------FEYEVELSTRPEDSMGDDKLWKQAEAALENVLHSLN 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D H + D+L + + ++ F K+ + Sbjct: 452 YKYRLNEGDGAFYGPKIDFH---IKDALNRSHQCGTIQLD----FQMPEKFD----LNYI 500 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ A++ G W + + I + V Sbjct: 501 DEKNEKRRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVA-----PVQVKVIPVSNAVHV 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + ++ +L++ G V D E++G + A + P +++G K + V I+ Sbjct: 556 EYANEVADKLAQAGIRVERDIRDEKLGYKIREAQMQKVPYVLVIGDKEMESEAVNIRKYG 615 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E ++L+ + + + Sbjct: 616 EEKSEVVALDVFVASIEEEIKDKK 639 >gi|171463016|ref|YP_001797129.1| prolyl-tRNA synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|226701317|sp|B1XT38|SYP_POLNS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|171192554|gb|ACB43515.1| prolyl-tRNA synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 580 Score = 247 bits (631), Expect = 3e-63, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 163/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ FL L+E P DAE+ SHKLM+R G+I + S G+Y++LPLG K + V IIREE Sbjct: 1 MKASQSFLATLKEAPSDAEVVSHKLMVRAGLIRKLSAGVYNYLPLGLKVIRKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW E+GR++ G E+LR+ DR+D+ + PT EEV+TD+ R+ Sbjct: 61 MNRAGAIELLMPMIQPAELWQETGRWEKMGPELLRIKDRHDRDFLIQPTSEEVVTDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP FYQIQ KFRDE RPRFG+MR REF MKDAYSFD EG K SY MF + Sbjct: 121 EIKSYKQLPVNFYQIQTKFRDERRPRFGIMRGREFSMKDAYSFDRDTEGLKKSYQIMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R+GL+ + A++G IGG S EF V+ADTGE + D D+ E Sbjct: 181 YTRIFKRMGLQFRAVTADNGAIGGSGSQEFHVIADTGEDAIVYCPD-SDYAANLE 234 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 104/198 (52%), Gaps = 3/198 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P D+ N + D P+ K V RGIEVGH+F GT+YS M T+ GK + Sbjct: 382 PEPLVLDIRNAVVGDPSPDGKGVVDICRGIEVGHVFQLGTRYSEAMGCTYLDQQGKAQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE HD KGIIWP S+AP ++ + + + + AC++++ Sbjct: 442 VMGCYGIGVTRLLGAAIEQGHDEKGIIWPISMAPCEVVICPMGYEKSEAVKAACDQLHDG 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G+ FA L+G P +V++G + + DS+VE K R +++ L Sbjct: 502 LLAAGVDVILDDRNERPGAMFADWGLIGAPFRVVIGDRGLVDSQVEFKGRTDAESQNIPL 561 Query: 432 EEVINYASHRFSNNRPVL 449 ++ + + Sbjct: 562 TQIKEKVIAAIQTTKQSI 579 >gi|15606769|ref|NP_214149.1| threonyl-tRNA synthetase [Aquifex aeolicus VF5] gi|8928367|sp|O67583|SYT_AQUAE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|2984004|gb|AAC07549.1| threonyl-tRNA synthetase [Aquifex aeolicus VF5] Length = 638 Score = 247 bits (631), Expect = 3e-63, Method: Composition-based stats. Identities = 83/437 (18%), Positives = 162/437 (37%), Gaps = 38/437 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD +L T + G+ WLP G + +REE + G + Sbjct: 237 EEVKKRDHRRLGKELEFFT-IDDNVGAGLILWLPRGAIYRKVLEDYLREEHLKRGYQLVY 295 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + + LW SG + Y + M +++ P + I++S +SY+ LP Sbjct: 296 TPHVGKSKLWETSGHLECYKQNMFPSMKIDEEEYYVKPMNCPFHIAIYKSRTRSYKELPL 355 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 +++ +R EL G++R R F DA+ TPE + L G Sbjct: 356 KLFELGTVYRYELSGVLHGLLRVRGFTQDDAHIVC-TPEQVNDVIRETLDFALSTLKDFG 414 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + P S E + + +D+ I Sbjct: 415 FNEFKIYLSTRPEYSIGSDE-----------------QWEVSQNALKKAIEDLGYEYEID 457 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 E A Y DV K+ D++ ++S + F ++ + T+ G D K Sbjct: 458 EGGGAFYGPKIDV---KIRDAIGRMWQLSTIQFD----FNLPERFDM----TYVGPDNKK 506 Query: 310 H-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 H + +G++ ++ + G IW ++P ++ +I I + +K+ Sbjct: 507 HRPYMIHRALLGSIERFTGILLEHYAGLLPIW---LSPTQVMIIPIADRHH---EYAKKV 560 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 Y L + G D E++ ++ A+L P+ ++VG + ++ V ++ + G Sbjct: 561 YEFLKENGIRAEMDLREERMNAKIRDAELKKIPVILVVGDREAQNNTVSVRTKKEGNLGS 620 Query: 429 MSLEEVINYASHRFSNN 445 M L + +++ + N Sbjct: 621 MELNKFLDWIKEKIKNK 637 >gi|313887217|ref|ZP_07820913.1| threonine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I] gi|312923446|gb|EFR34259.1| threonine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I] Length = 650 Score = 247 bits (631), Expect = 3e-63, Method: Composition-based stats. Identities = 81/443 (18%), Positives = 155/443 (34%), Gaps = 37/443 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + +G+ WLP G + + ++ Q R G Sbjct: 234 YLALLEEAKKRDHRKIGKELELFA-FSQRVGQGLPLWLPRGTQLRLKLEDFLKRIQKRYG 292 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHIK 123 ++ P + + +L+ SG Y YG + + + +A + P + +I+R Sbjct: 293 YQQVMTPHIGNVELYKTSGHYAKYGADSFQVITTPQEGEAFMLKPMNCPHHCEIYRLKPH 352 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + +R E G+ R R F DA+ F P+ K + K+ Sbjct: 353 SYRDLPVRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCR-PDQVKEEFLKVMDIIF 411 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 IF L ++ + + T ++ S++ D + + Sbjct: 412 IIFRALDFENFEAQISLR-------------SQTDRSKYIGSEENWDRAEQAIIEACQEA 458 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y D + D+L ++ ++ + Sbjct: 459 GLPAHVEYDEAAFYGPKLDFM---VKDALGRRWQLGTIQVDYNLP--------ERFDLEY 507 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G D + H + G+M AV+ GK +W + I + Sbjct: 508 TGEDNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LAPDQVVILPVSERF 561 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + ++ A LS+ V DD E++G + +L P +IVG + +D V ++ + Sbjct: 562 NEYANEVAAALSEHDISVSIDDRNEKVGRKIRDNELKRIPYMLIVGEQEQADGTVSVRKQ 621 Query: 422 LTGIREDMSLEEVINYASHRFSN 444 G + + Sbjct: 622 GEGDVGTEKISTFAERILQEIES 644 >gi|256844949|ref|ZP_05550407.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2] gi|256718508|gb|EEU32063.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2] Length = 637 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 80/443 (18%), Positives = 162/443 (36%), Gaps = 41/443 (9%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R K+ + + RD +L L + ++ G +LP G + + + R+E Sbjct: 226 RLKKHLKLMEEAEKRDHRKLGKELELF--FLSEYGPGFPFFLPKGMIIRNVLIDLWRKEH 283 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G +++ P + + +LW SG + +Y + M ++ ++ P + F+ Sbjct: 284 EKAGYLQLETPIMLNKELWEISGHWFNYRENMYT-SEIDELEFAIKPMNCPGGVLSFKHQ 342 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP ++ R E G+MR R F D++ F +TP+ + + Sbjct: 343 LHSYKDLPARLAELGRVHRHEFSGALHGLMRVRSFTQDDSHIF-MTPDQVQDEIIGVVNL 401 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + + +L + + P S E D + D Sbjct: 402 IDKFYSKLFGFEYEIELSTKPEKAIGSQE-----------------IWDMAEAALAGALD 444 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I A Y D K+ D++ + ++ F ++ Sbjct: 445 KLGRKYKINPGDGAFYGPKLDF---KIKDAIGRMWQCGTIQLD----FNLPERFD----V 493 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 T+ G DG+ H + G++ ++ + G +W V ++L + Sbjct: 494 TYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFSMWLAPVQVKVLTL------ND 547 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEI 418 C ++I +L ++G DD E IG + A+ P+Q+I+G V + +V I Sbjct: 548 ECIPYAKEIMDKLEELGIRAELDDRNETIGYKIREANGKYKIPMQLIIGKNEVENKEVNI 607 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + + L E Y Sbjct: 608 RRFGSKDQFSKPLNEFYTYVVDE 630 >gi|331016426|gb|EGH96482.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 544 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 121/270 (44%), Positives = 174/270 (64%), Gaps = 10/270 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M ++ Sbjct: 121 ELNSYKQLPINMYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADNASLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F RLGLK P+ A++G IGG SHEF VLA++GE + + D+ E + Sbjct: 181 YSNVFSRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVF-SNGSDYAANIEKAEA- 238 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 V + A AAT ++ ++ Sbjct: 239 --------VPREKARAAATEELRLVDTPNA 260 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 67/181 (37%), Positives = 99/181 (54%), Gaps = 4/181 (2%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ + RGIEVGHIF GTKYS M Sbjct: 364 DDKHYFGVNWERDLPVPTVADLRNVVAGDPSPDGQGTLEIKRGIEVGHIFQLGTKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK + MG YGIG RVVAA IE + D GIIW D++APF+I+LI ++ Sbjct: 424 KCQVLGENGKPVNLAMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALIPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 R+A +K+YA L+ G +V DD + G +FA +L+G P +++V + +++ + Sbjct: 484 DAVREATDKLYAELTAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNL 543 Query: 417 E 417 E Sbjct: 544 E 544 >gi|325578419|ref|ZP_08148554.1| threonine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392] gi|325160155|gb|EGC72284.1| threonine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392] Length = 643 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 72/445 (16%), Positives = 142/445 (31%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD L L + + + G+ W G + +R + Sbjct: 229 LAEYLTRLEEAAKRDHRKIGKALDLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + LW ++G + +Y +++ ++ P + IF + Sbjct: 287 EYDYQEVKGPFMMDRVLWEKTGHWQNY-GDLMFTTQSENREYAIKPMNCPGHVQIFNQGL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F DA+ F T + + Sbjct: 346 KSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIKMV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G ++I ++ + P + D D Sbjct: 405 YDIYSTFGFQNIQVKLSTRPEKR-----------------IGADDMWDRAEAGLAAALAH 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I A Y + L D L + ++ +A+ Sbjct: 448 NGLEYEIQAGEGAFYGPKIEF---ALRDCLDREWQCGTIQLDFALPGRL--------NAS 496 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + +G++ +I + G W V +++ Sbjct: 497 YVAEDNDRRTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPVQAVVMNIT------DS 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ +LS G V D E++G + L P ++ G K +++ KV ++ Sbjct: 551 QADYVQKVVKQLSDAGLRVKADLRNEKVGFKIREHTLRRVPYMLVCGDKEIAEGKVAVRT 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R ++EE + Sbjct: 611 RKGADLGTFTIEEFAEILKSQVRQR 635 >gi|213969174|ref|ZP_03397313.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1] gi|301384830|ref|ZP_07233248.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13] gi|302064183|ref|ZP_07255724.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40] gi|302130620|ref|ZP_07256610.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926172|gb|EEB59728.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1] Length = 571 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 121/270 (44%), Positives = 174/270 (64%), Gaps = 10/270 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MNAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M ++ Sbjct: 121 ELNSYKQLPINMYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADNASLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F RLGLK P+ A++G IGG SHEF VLA++GE + + D+ E + Sbjct: 181 YSNVFSRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVF-SNGSDYAANIEKAEA- 238 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 V + A AAT ++ ++ Sbjct: 239 --------VPREKARAAATEELRLVDTPNA 260 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 111/207 (53%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ + RGIEVGHIF GTKYS M Sbjct: 364 DDKHYFGVNWERDLPVPTVADLRNVVAGDPSPDGQGTLEIKRGIEVGHIFQLGTKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK + MG YGIG RVVAA IE + D GIIW D++APF+I+LI ++ Sbjct: 424 KCQVLGENGKPVNLAMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALIPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 R+A +K+YA L+ G +V DD + G +FA +L+G P +++V + +++ + Sbjct: 484 DAVREATDKLYAELTTAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRSLAEGNL 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K R + +++ +V+++ R Sbjct: 544 EYKSRTESQPQAIAVADVLSFIQGRVK 570 >gi|295399847|ref|ZP_06809828.1| prolyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93] gi|294978250|gb|EFG53847.1| prolyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93] Length = 567 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 122/235 (51%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ F+P L+E P DAE+ SH+L+LR G I Q + G+Y++LPLGQ+ L V AIIREE Sbjct: 1 MRQSQSFIPTLREVPADAEVKSHQLLLRAGFIRQSASGVYTFLPLGQRVLQKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P LQ A+LW +SGR+ SYG E++RL DR+++ GPTHEE++T + R Sbjct: 61 MNRAGAVELLMPALQPAELWQQSGRWYSYGPELMRLKDRHERDFALGPTHEEMITTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ+KFRDE RPRFG++R REF+MKDAYSF + E +YNKM+ + Sbjct: 121 EVKSYKRLPLTLYQIQVKFRDEKRPRFGLLRGREFIMKDAYSFHTSQESLDETYNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL + A+SG IGG +HEF+VL++ GE + S D+ E Sbjct: 181 YSNIFRRCGLNFRAVIADSGAIGGKDTHEFMVLSEIGEDTIAYSD-ASDYAANIE 234 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 67/190 (35%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ K RGIEVGH+F GT+YS ++AT+ +G+ + Sbjct: 378 VSEYADLRFIQEGDPSPDGKGTIRFARGIEVGHVFKLGTRYSEALNATYLDENGRSQTMI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R+VAA+ E D G++WP +VAPF + LI A + R ++ Y +L Sbjct: 438 MGCYGIGVSRLVAAIAEQFADENGLVWPVAVAPFHVHLITANAKSEEQRQLADEWYEKLR 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V +DD E+ G +FA +DL+G P++V VG + + VE+K R TG ++ + E Sbjct: 498 QAGLEVLYDDRPERAGVKFADSDLIGIPVRVTVGKR-AGEGVVEVKVRQTGESVEVPVHE 556 Query: 434 VINYASHRFS 443 +I+ Sbjct: 557 LIDTIQRLLQ 566 >gi|217962055|ref|YP_002340625.1| threonyl-tRNA synthetase [Bacillus cereus AH187] gi|222098038|ref|YP_002532095.1| threonyl-tRNA synthetase [Bacillus cereus Q1] gi|229141301|ref|ZP_04269839.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST26] gi|217064460|gb|ACJ78710.1| threonyl-tRNA synthetase [Bacillus cereus AH187] gi|221242096|gb|ACM14806.1| threonyl-tRNA synthetase [Bacillus cereus Q1] gi|228642082|gb|EEK98375.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST26] Length = 645 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 79/433 (18%), Positives = 169/433 (39%), Gaps = 30/433 (6%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L T + +G+ WLP G + I +++ G Sbjct: 237 LRMLEEAKERDHRKLGKELKLFTN-SQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGY 295 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG ++ Y M + +++ ++ P + ++++ I SYR Sbjct: 296 DHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYR 355 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K ++ L ++ Sbjct: 356 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYK 415 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 GL++ R + ADT + + + + D++ Sbjct: 416 DFGLENYSFRLS-----------YRDPADTK--KYYADDEMWEKAQGMLKEAMDEMGLDY 462 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y DV ++ +L +++ +S ++ F ++ ++ G D Sbjct: 463 YEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERF----ELSYVGED 511 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 GK H + G + + + + +P +AP ++ +I + QV D + Sbjct: 512 GKQHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVQVIPVSP--QVHLDYAK 567 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+ L + G V D E+IG + A + P ++VG V+++ V ++ Sbjct: 568 KVQDELRRAGMRVELDTREEKIGYKIREAQMQKIPYMLVVGDNEVTENGVNVRKYGEQKS 627 Query: 427 EDMSLEEVINYAS 439 E ++L+ ++ Sbjct: 628 ETIALDAFVDMIK 640 >gi|83309439|ref|YP_419703.1| threonyl-tRNA synthetase [Magnetospirillum magneticum AMB-1] gi|123740560|sp|Q2WAI1|SYT_MAGMM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|82944280|dbj|BAE49144.1| Threonyl-tRNA synthetase [Magnetospirillum magneticum AMB-1] Length = 638 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 74/438 (16%), Positives = 147/438 (33%), Gaps = 40/438 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD ++ L + + G W G V + +R Sbjct: 233 YLHMLEEAEKRDHRRLGREMELF--HQQEEAAGSVFWHKKGWTLYRAVESYMRRRLEANN 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L LW SG D + + M + ++++ + P + IFR IKSY Sbjct: 291 YEEVKTPQLVDFSLWEASGHADKFSESMFTIKTQDERHLAVKPMNCPCHVQIFRQGIKSY 350 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R E G+MR R F DA+ F + + + + Sbjct: 351 RDLPLRMAEFGSCHRYEPSGALHGIMRVRAFTQDDAHIFCTEDQITSETIAF-CQLLKEV 409 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + ++ P S E D + Sbjct: 410 YTDFGFTDVRVKFSDRPAKRAGSDE-----------------TWDKAESALLEASKAAGL 452 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D++ + + ++ F + + A + Sbjct: 453 ETVLNPGEGAFYGPKLEF---VLRDAIGRDWQCGTLQVD----FVLPER----LDAAYVA 501 Query: 305 ADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG K V + +G+ ++ + G+ +W +++ D Sbjct: 502 EDGAKKRPVMLHRAILGSFERFLGILIENFAGRFPLWLAPTQVVVATIV------SEADD 555 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ A L G V D E+I + + P+ ++VG + +V I+ + Sbjct: 556 FAREVEATLKAAGLRVELDLRNEKINYKVREHSVAKVPVMLVVGKREAESRQVAIRRLGS 615 Query: 424 GIREDMSLEEVINYASHR 441 +E ++L++ + + Sbjct: 616 QNQEIVALDQAVATLAAE 633 >gi|319744717|gb|EFV97060.1| threonine--tRNA ligase [Streptococcus agalactiae ATCC 13813] Length = 647 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 91/449 (20%), Positives = 164/449 (36%), Gaps = 38/449 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L +E RD +L L M++ + +G+ WLP G + I +++ Sbjct: 227 KAYLKRREEAKERDHRKLGKELDLF--MVNPEVGQGLPFWLPNGATIRRELERYIVDKEI 284 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P + S + + SG +D Y ++M D D + + P + ++++ H Sbjct: 285 ASGYQHVYTPPMASVEFYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNCPHHIEVYKHH 344 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP ++ + R E G+ R RE + DA+ F TPE K + K Sbjct: 345 VHSYRELPIRIAELGMMHRYEKSGALTGLQRVREMTLNDAHIFV-TPEQIKDEFLKALNL 403 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 I+ L R + D E + D Sbjct: 404 IAEIYEDFNLTDYRFRLS-----YRDPEDKHKYYDNDEM--------WENAQAMLKEAMD 450 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D E A Y D+ ++ +L + +S ++ F ++ Sbjct: 451 DFGLDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD----L 499 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GADG++H + GI M A++ ++ G W + I ++ Sbjct: 500 KYIGADGEEHRPIMIHRGGISTMERFTAILIETYKGAFPTWLA-----PQQVSVIPISNE 554 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L G DD E++ + A P Q+IVG K + + V ++ Sbjct: 555 AHIDYAWEVARVLKDRGIRAEVDDRNEKMQYKIRAAQTQKIPYQLIVGDKEMEEKGVNVR 614 Query: 420 HRLTGIREDMSLEEVINYASHRF-SNNRP 447 + E S+EE + +RP Sbjct: 615 RYGSKATETKSIEEFVESILADIARKSRP 643 >gi|85059898|ref|YP_455600.1| prolyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans'] gi|114152253|sp|Q2NRN0|SYP_SODGM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|84780418|dbj|BAE75195.1| prolyl-tRNA synthase [Sodalis glossinidius str. 'morsitans'] Length = 574 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 123/235 (52%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+YSWLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKEVPADAEVVSHQLMLRAGMIRKLASGLYSWLPTGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE+S+P +Q ADLW ESGR+ YG E+LR DR +A + GPTHEEV+TD+ R+ Sbjct: 61 MDNAGAIEVSMPVVQPADLWQESGRWVQYGPELLRFTDRGARAFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ + Sbjct: 121 EVSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHTSQASLQATYDAMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R+GL+ ++A++G IGG SHEF VLA +GE + D+ E Sbjct: 181 YSAIFTRMGLEFRAVQADTGSIGGSASHEFQVLAGSGEDDIVF-STASDYAANIE 234 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 68/195 (34%), Positives = 110/195 (56%), Gaps = 3/195 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ D P+ RGIEVGHIF GTKYS M AT +G DG++ + Sbjct: 380 PLPQVADLRKVVEGDISPDGNGTLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRNQTL 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYAR 371 MG YGIG RVV A IE +HD +GI+WP+++APF ++++ + H ++ E +Y + Sbjct: 440 TMGCYGIGITRVVVAAIEQNHDDRGILWPETLAPFNVAILPMNMHKSFRVKEVAEDLYQQ 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P Q+++G + + ++E K+R +G + + L Sbjct: 500 LQARGIDVLLDDRKERPGVMFADMELIGVPHQLVIGDRNLDTEEIEYKNRRSGEKRMIKL 559 Query: 432 EEVINYASHRFSNNR 446 ++++ + + Sbjct: 560 SAIVDFLVSEIATAK 574 >gi|251795037|ref|YP_003009768.1| threonyl-tRNA synthetase [Paenibacillus sp. JDR-2] gi|247542663|gb|ACS99681.1| threonyl-tRNA synthetase [Paenibacillus sp. JDR-2] Length = 637 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 85/442 (19%), Positives = 153/442 (34%), Gaps = 39/442 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L M + + G+ +LP G + RE NR Sbjct: 234 YLYQLEEAKKRDHRKLGKELELF--MFSEEAPGMPFYLPKGMAIRTALENFSRELLNRND 291 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + +W +SG ++ Y M ++ P + IF++ ++SY Sbjct: 292 YEEVRTPFMMNKRMWEQSGHWEHYKDNM-YFTKVDESEFALKPMNCPGHMLIFKNSLRSY 350 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R EL G+MR R F DA+ F + + M S + Sbjct: 351 RELPVRLAEFGQVHRHELSGALGGMMRVRTFCQDDAHLFVRPDQIEEEIGKVM--SLIGE 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 +++ + + + P S E D S D Sbjct: 409 VYKVFGFAYTVELSTRPADYMGSDE-----------------LWDEAEQSLKNVLDAQGV 451 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D H + D+L + + ++ F K+ ++ G Sbjct: 452 NYRINEGDGAFYGPKIDFH---IVDALKRSWQCGTIQLD----FQMPEKFD----LSYIG 500 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D K + I + + + +P +AP + +I + H+ D Sbjct: 501 EDNKKQRPVVIHRAI--YGSLDRFLGILIEHYSGAFPIWLAPVQAKVIPVSEHE---LDY 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ ++L + G V D E++G++ + L P ++VG V ++ R Sbjct: 556 ALQVKSQLIQAGIRVEVDARSEKLGNKIRKSQLEKVPYMLVVGKNERLSGSVSVRKRGEA 615 Query: 425 IREDMSLEEVINYASHRFSNNR 446 LEE+ F R Sbjct: 616 EGSVQQLEEIAGAIVEEFRKRR 637 >gi|167907142|ref|ZP_02494347.1| threonyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177] Length = 670 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 73/437 (16%), Positives = 144/437 (32%), Gaps = 39/437 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + G W P G + A +R Q G Sbjct: 232 YIQRMEEAEKRDHRKLGRELDLF--HFQEDAPGAVFWHPRGWAVFQELIAYMRRRQQDAG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E++ P + LW SG + +Y M + +A+ P + ++R +KSY Sbjct: 290 YVEVNSPDVMDRSLWEISGHWQNYRDHMFTTETEDGRALALKPMNCPGSALLYRHGLKSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R E G++R R F DA+ + TP+ ++ L I Sbjct: 350 RDLPIRMGEFGKVHRYEPSGSLHGLLRVRHFTQDDAHIYC-TPQQMDAECREVVTLVLDI 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + ++ + P + D + + + Sbjct: 409 YRQFGFDEVRIKLSTRPENR-----------------MGTDATWDQLEGTLVQALEGMGL 451 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D++ + + +++ FG + Sbjct: 452 QYHLKPGEGAFYGPKLEF---VLRDAIGRDWQCGTLQVDMNLPERFG--------IEYVD 500 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ + G++ ++ H G+ +W + +S+ + Sbjct: 501 EDGQRKRPVMLHRALFGSLERFTGILIEHHAGRLPVWLAPLQAIVLSIT------EAHGA 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L G D E IG + L P ++VG+K V I+ R Sbjct: 555 YAQDVARLLRGAGLRAEADIRNETIGYKIREQTLQRIPFLLVVGAKERDAGAVAIRTRNG 614 Query: 424 GIREDMSLEEVINYASH 440 + L + + Sbjct: 615 DDLGVLPLTQAVARLLQ 631 >gi|194290784|ref|YP_002006691.1| prolyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424] gi|226699135|sp|B3R894|SYP_CUPTR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|193224619|emb|CAQ70630.1| prolyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424] Length = 573 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 125/275 (45%), Positives = 172/275 (62%), Gaps = 5/275 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G + + V I+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGIYNYMPIGLRVIRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+S+P +Q A+LW E+GR+D G E+LRL DR+++ PT EEV+TDI RS Sbjct: 61 MNRAGAVELSMPVIQPAELWQETGRWDKMGPELLRLKDRHERDFAVQPTSEEVVTDIARS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE RPRFG+MR REF MKDAYSFD +G + SY M+ + Sbjct: 121 EIRSYKQLPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDTDGLRKSYENMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMD----FPIPSEN 236 Y+RIF R GL+ + A++G IGG SHEF V+A+TGE + + Sbjct: 181 YVRIFRRFGLEFRAVAADNGAIGGSGSHEFHVIAETGEDAIVYCPTSAYAANMEAAEALP 240 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + +V+ +T P + E L L Sbjct: 241 LVAERAAPTQDLVKTFT-PEKVKCEQVAEFLNIPL 274 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 108/193 (55%), Gaps = 3/193 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ + RGIEVGH+F GT+YS M+ATF +GK + Sbjct: 381 PEPIVADLRNVVAGDASPDGQGTLEICRGIEVGHVFMLGTRYSESMNATFLDENGKTQPM 440 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 QMG YGIG R++ A IE + D +GIIWP ++APF + + + + + ++I+A Sbjct: 441 QMGCYGIGITRILGAAIEQNFDERGIIWPAAIAPFAVVICPVGYDRSEAVKAEADRIHAE 500 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD GE+ G FA +L+G P +V+VG + + + KVE + R +S+ Sbjct: 501 LLAAGVDVILDDRGERPGVMFADWELIGVPHRVVVGDRGLKEGKVEYQGRRDAQATAVSV 560 Query: 432 EEVINYASHRFSN 444 EV+ + +N Sbjct: 561 AEVVGHVRSLLAN 573 >gi|295135444|ref|YP_003586120.1| threonyl-tRNA synthetase [Zunongwangia profunda SM-A87] gi|294983459|gb|ADF53924.1| threonyl-tRNA synthetase [Zunongwangia profunda SM-A87] Length = 648 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 85/436 (19%), Positives = 156/436 (35%), Gaps = 38/436 (8%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L T + +G+ WLP G + + +++ Q + G + P Sbjct: 238 AKKRDHRKLGKELELFT-FSQKVGQGLPLWLPKGAALRERLENFLKKAQKKAGYEMVVSP 296 Query: 73 TLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 + +L+V SG Y YG++ + + + P + +++ S SYR+LP Sbjct: 297 HIGHKELYVTSGHYAKYGEDSFQPIKTPHEGEEFLLKPMNCPHHCEMYNSQSWSYRDLPK 356 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F + +R E G+ R R F DA+ F TPE + K+ L +F LG Sbjct: 357 RFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFC-TPEQLDEEFKKVIDLTLYVFDSLG 415 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 ++ + D + + D + + + LN ++ Sbjct: 416 FENFTAQVSLR--------------DPENKEKYIGSDDVWEKAENAIINAAKEKGLNYVI 461 Query: 250 E-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 E A Y D + D+L + ++ ++ T+KG+D + Sbjct: 462 ETGEAAFYGPKLDFM---VKDALGRSWQLGTIQVDYNLP--------ERFDLTYKGSDNE 510 Query: 309 DHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 H + G+M A++ G +W +SL + +K Sbjct: 511 SHRPVMIHRAPFGSMERFIAILLEHTAGNFPLWLMPEQAIILSL------SEKYEKYSQK 564 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + + L D+ E IG + A++ FP +IVG + D V ++ G Sbjct: 565 VLSLLENHEIRAVLDNRNETIGKKIREAEVQKFPYMLIVGEQEAKDGTVSVRKHGEGDIG 624 Query: 428 DMSLEEVINYASHRFS 443 M +EE + Sbjct: 625 TMPVEEFAQIIKNEIE 640 >gi|23016433|ref|ZP_00056189.1| COG0441: Threonyl-tRNA synthetase [Magnetospirillum magnetotacticum MS-1] Length = 621 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 74/438 (16%), Positives = 147/438 (33%), Gaps = 40/438 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD ++ L + + G W G V + +R Sbjct: 216 YLHMLEEAEKRDHRRLGREMELF--HQQEEAAGSVFWHKKGWTLYRAVESYMRRRLEAND 273 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L LW SG D + + M + ++++ + P + IFR IKSY Sbjct: 274 YQEVKTPQLVDFSLWEASGHADKFSESMFTIRTQDERHLAVKPMNCPCHVQIFRQGIKSY 333 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R E G+MR R F DA+ F + + + + Sbjct: 334 RDLPLRMAEFGSCHRYEPSGALHGIMRVRAFTQDDAHIFCTEDQITSETIAF-CQLLKEV 392 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + ++ P S E D + Sbjct: 393 YTDFGFTDVRVKFSDRPAKRAGSDE-----------------TWDKAESALLEASKAAGL 435 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D++ + + ++ F + + A + Sbjct: 436 ETVLNPGEGAFYGPKLEF---VLRDAIGRDWQCGTLQVD----FVLPER----LDAAYVA 484 Query: 305 ADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG K V + +G+ ++ + G+ +W V +++ Sbjct: 485 EDGAKKRPVMLHRAILGSFERFLGILIENFAGRFPVWLAPVQVVVATIV------SEADV 538 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ A L G V D E+I + + P+ ++VG + +V I+ + Sbjct: 539 FATEVAATLKAAGIRVELDLRNEKINYKVREHSVAKVPVMLVVGKREAESRQVAIRRLGS 598 Query: 424 GIREDMSLEEVINYASHR 441 +E ++L++ + + Sbjct: 599 QNQEIVALDQAVATLAAE 616 >gi|315635289|ref|ZP_07890566.1| proline--tRNA ligase [Aggregatibacter segnis ATCC 33393] gi|315476035|gb|EFU66790.1| proline--tRNA ligase [Aggregatibacter segnis ATCC 33393] Length = 571 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 126/276 (45%), Positives = 171/276 (61%), Gaps = 4/276 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P +A I SH+LMLR GMI + G+Y+W+P G + L V IIREE Sbjct: 1 MRTSKYLLSTLKETPAEAAIVSHQLMLRAGMIRPLASGLYNWMPTGWRVLQKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GAIE+ +P +Q A+LW ESGR+D YG E+LR DR +++ + GPT+EE +TD+ R Sbjct: 61 MNKSGAIEIKMPVVQPAELWQESGRWDQYGPELLRFTDRGERSFVIGPTNEEAITDLMRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP Y IQ KFRDE+RPRFGVMRSREF+MKDAYSF + E + +Y M+ + Sbjct: 121 EVTSYRQLPLNLYHIQTKFRDEVRPRFGVMRSREFIMKDAYSFHMDKESLQQTYEVMYQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP---SENT 237 Y IF RLGL ++A++G IGG SHEF VLA++GE V D+ +E Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLANSGEDDVIF-STESDYAANIELAEAV 239 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + + +E P A T E+ + + Sbjct: 240 AVGERAAPTKAMELVDTPNAKTIADLVEQFNQPIEK 275 Score = 177 bits (448), Expect = 4e-42, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 113/207 (54%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D +I + +D+ N D P+ K + RGIEVGHIF G KYS M Sbjct: 364 DGKHYFNINWERDVALPKVADIRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGDKYSNAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 +AT +G DG+ V MG YGIG RVVAA IE HD + I D++APF ++++ + Sbjct: 424 NATVQGEDGRPTVVTMGCYGIGVTRVVAAAIEQHHDERGIIWPSDAMAPFTVAIVPMNMH 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + E++Y L G +V +DD E+ G FA +L+G P V++G K +++ ++ Sbjct: 484 KSESVQAFAEELYRTLLAQGVEVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K+R +G ++ ++ ++I++ + Sbjct: 544 EYKNRRSGEKQMIAKAQLIDFLKSQIK 570 >gi|56419792|ref|YP_147110.1| prolyl-tRNA synthetase [Geobacillus kaustophilus HTA426] gi|81819753|sp|Q5L0J4|SYP_GEOKA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|56379634|dbj|BAD75542.1| proline-tRNA synthetase [Geobacillus kaustophilus HTA426] Length = 567 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 121/235 (51%), Positives = 163/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ F+P L+E P DAE+ SH+L+LR G I Q + G+Y++LPLGQ+ L V AIIREE Sbjct: 1 MRQSQAFIPTLREVPADAEVKSHQLLLRAGFIRQSASGVYTFLPLGQRVLQKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P LQ A+LW +SGR+ SYG E++RL DR+++ GPTHEE++T I R Sbjct: 61 MNRIGAMELFMPALQPAELWQQSGRWYSYGPELMRLKDRHERDFALGPTHEEMITAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +K+Y+ LP YQIQ KFRDE RPRFG++R REF+MKDAYSF + E +YN M+ + Sbjct: 121 EVKTYKRLPLVLYQIQTKFRDEKRPRFGLLRGREFMMKDAYSFHTSKESLDETYNNMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL + A+SG IGG +HEF+VL+D GE + S D+ E Sbjct: 181 YANIFRRCGLNFRAVIADSGAIGGKDTHEFMVLSDIGEDTIAYSD-ASDYAANIE 234 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 107/197 (54%), Gaps = 3/197 (1%) Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADG 307 + +D+ K D P+ K RGIEVGH+F GTKYS M+A + +G Sbjct: 372 PGRDFAVSQYADLRFVKEGDPSPDGKGTIRFARGIEVGHVFKLGTKYSEAMNAVYLDENG 431 Query: 308 KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + + MG YGIG R+VAA+ E D G++WP SVAPF I L+ A R E+ Sbjct: 432 QTQTMIMGCYGIGVSRLVAAIAEQFADEHGLVWPASVAPFHIHLLTANAKSDEQRALAEE 491 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 Y +L + G +V +DD E+ G +FA +DL+G PL+V VG + + VE+K R TG Sbjct: 492 WYEKLGQAGFEVLYDDRPERAGVKFADSDLIGIPLRVTVGKR-AGEGVVEVKVRKTGETF 550 Query: 428 DMSLEEVINYASHRFSN 444 D+ + E+++ A + Sbjct: 551 DVPVSELVDTARRLLQS 567 >gi|261419457|ref|YP_003253139.1| prolyl-tRNA synthetase [Geobacillus sp. Y412MC61] gi|319766272|ref|YP_004131773.1| prolyl-tRNA synthetase [Geobacillus sp. Y412MC52] gi|261375914|gb|ACX78657.1| prolyl-tRNA synthetase [Geobacillus sp. Y412MC61] gi|317111138|gb|ADU93630.1| prolyl-tRNA synthetase [Geobacillus sp. Y412MC52] Length = 567 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 121/235 (51%), Positives = 163/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ F+P L+E P DAE+ SH+L+LR G I Q + G+Y++LPLGQ+ L V AIIREE Sbjct: 1 MRQSQAFIPTLREVPADAEVKSHQLLLRAGFIRQSASGVYTFLPLGQRVLQKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P LQ A+LW +SGR+ SYG E++RL DR+++ GPTHEE++T I R Sbjct: 61 MNRIGAMELFMPALQPAELWQQSGRWYSYGPELMRLKDRHERDFALGPTHEEMITAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +K+Y+ LP YQIQ KFRDE RPRFG++R REF+MKDAYSF + E +YN M+ + Sbjct: 121 EVKTYKRLPLVLYQIQTKFRDEKRPRFGLLRGREFMMKDAYSFHTSKESLDETYNNMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL + A+SG IGG +HEF+VL+D GE + S D+ E Sbjct: 181 YANIFRRCGLNFRAVIADSGAIGGKDTHEFMVLSDIGEDTIAYSD-ASDYAANIE 234 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 107/197 (54%), Gaps = 3/197 (1%) Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADG 307 + +D+ K D P+ K RGIEVGH+F GTKYS M+A + +G Sbjct: 372 PGRDFAVSQYADLRFVKEGDPSPDGKGTIRFARGIEVGHVFKLGTKYSEAMNAVYLDENG 431 Query: 308 KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + + MG YGIG R+VAA+ E D G++WP SVAPF I L+ A R E+ Sbjct: 432 QTQTMIMGCYGIGVSRLVAAIAEQFADEHGLVWPASVAPFHIHLLTANAKSDEQRALAEE 491 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 Y +L + G +V +DD E+ G +FA +DL+G PL+V VG + + VE+K R TG Sbjct: 492 WYEKLGQAGFEVLYDDRPERAGVKFADSDLIGIPLRVTVGKR-AGEGVVEVKVRKTGETF 550 Query: 428 DMSLEEVINYASHRFSN 444 D+ + E+++ A + Sbjct: 551 DVPVSELVDTARRLLQS 567 >gi|256422752|ref|YP_003123405.1| threonyl-tRNA synthetase [Chitinophaga pinensis DSM 2588] gi|256037660|gb|ACU61204.1| threonyl-tRNA synthetase [Chitinophaga pinensis DSM 2588] Length = 646 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 87/448 (19%), Positives = 170/448 (37%), Gaps = 38/448 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L T + G+ WLP G + + + +++ Q + Sbjct: 230 EYLHLVEEAKKRDHRKLGKELELFT-FSEKVGLGLPLWLPKGAMLRERLQSFLQKAQIES 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + + P + + +L++ SG Y+ YGK+ + + + P + +I++S Sbjct: 289 GYMPVVTPHIGNKNLYITSGHYEKYGKDSFQPIHTPEEGEEFMLKPMNCPHHCEIYKSSP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSY++LP F + +R E G+ R R F DA+ F P+ K + K+ Sbjct: 349 KSYKDLPVRFAEFGTVYRYEQHGELHGLTRVRGFTQDDAHLFCR-PDQVKEEFCKVIDLV 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L +F L + D + + D + Sbjct: 408 LYVFQSLNFTDYTAQISLR--------------DQEDRAKYIGSDENWNLAEQAIIESAA 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L ++VE A Y D + D+L ++ ++ Sbjct: 454 EKGLKTVVEYGEAAFYGPKLDFM---VKDALGRKWQLGTIQVDYNLP--------ERFEL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GAD + H + G++ AV+ + G +P + P ++ ++ I +Q Sbjct: 503 EYVGADNQKHRPVMIHRAPFGSLERFIAVLI---EHCGGKFPLWLTPTQVKILPISDKNQ 559 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ L V DD E+IG + +L P +++G K ++SKV ++ Sbjct: 560 ---EYAEKVAELLKNVEIRAEIDDRSEKIGKKIRETELAKIPYMLVIGEKEAAESKVAVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNRP 447 + G M +++ I + +P Sbjct: 617 RQAKGDLGAMDIDQFIALVKEEVVSRKP 644 >gi|292489201|ref|YP_003532088.1| prolyl-tRNA synthetase [Erwinia amylovora CFBP1430] gi|292898564|ref|YP_003537933.1| prolyl-tRNA synthetase [Erwinia amylovora ATCC 49946] gi|291198412|emb|CBJ45519.1| prolyl-tRNA synthetase [Erwinia amylovora ATCC 49946] gi|291554635|emb|CBA22316.1| Prolyl-tRNA synthetase [Erwinia amylovora CFBP1430] Length = 572 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 120/235 (51%), Positives = 163/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LRL DR+D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRLVDRSDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M + Sbjct: 121 ELSSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQGSLQETYDAMHRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y + F R+GL ++A++G IGG+ SHEF VLA +GE + D+ E Sbjct: 181 YSQSFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVF-SSESDYAANIE 234 Score = 179 bits (453), Expect = 1e-42, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 108/192 (56%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ K RGIEVGHIF GTKYS M A+ +G DG++ + Sbjct: 380 PLPRIADIRNVVEGDASPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKASVQGEDGRNQIL 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYAR 371 MG YGIG R+VAA IE +HD +GIIW ++APF+++++ + ++ E +Y + Sbjct: 440 TMGCYGIGITRIVAAAIEQNHDERGIIWSPALAPFQVAILPMNMQKSFRVKELAEALYHQ 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P ++VG + + +VE K R G + + Sbjct: 500 LRAKGIDVILDDRKERPGVMFADMELIGVPHTIVVGERHLDSEEVEYKSRRAGEKRMIKT 559 Query: 432 EEVINYASHRFS 443 E+I++ + Sbjct: 560 NEIIDFLVEELA 571 >gi|171057265|ref|YP_001789614.1| prolyl-tRNA synthetase [Leptothrix cholodnii SP-6] gi|226701306|sp|B1XYW5|SYP_LEPCP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|170774710|gb|ACB32849.1| prolyl-tRNA synthetase [Leptothrix cholodnii SP-6] Length = 581 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 121/235 (51%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ SH+LM+R GMI + GIY+++P+G + + V AIIREE Sbjct: 1 MKASQFFIATLKEAPADAEVKSHQLMMRAGMIKRLGAGIYNYMPMGLRVIRKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW E+GR+D G E+LR+ DR+D+ I PT EEV+TDI R Sbjct: 61 MNRAGAVELLMPVVQPAELWQETGRFDKMGPELLRVKDRHDRDFIIQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD + SY+ MF + Sbjct: 121 ELRSYKQLPKNFYHIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDAASAARSYDAMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R GL+ + A++G IGGDLSHEF V+ADTGE + D+ E Sbjct: 181 YKRIFDRFGLQYRAVAADTGAIGGDLSHEFQVIADTGEDAIVYCPT-SDYAANIE 234 Score = 167 bits (422), Expect = 5e-39, Method: Composition-based stats. Identities = 67/190 (35%), Positives = 105/190 (55%), Gaps = 3/190 (1%) Query: 258 ATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 A +D+ N D P+ + V RGIEVGH+F+ GTKYS M+AT+ +GK +++MG Sbjct: 392 AVADIRNVVEGDPSPDGQGVLAIQRGIEVGHVFFLGTKYSKAMNATYLDENGKPQFMEMG 451 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSK 374 YGIG R++ A IE HD +GI+WPD++APF + + I + A + ++ L Sbjct: 452 CYGIGVTRILGAAIEQKHDARGILWPDAIAPFTVVVCPIGYDRSAEVKAAADALHDELQA 511 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV DD GE+ G+ FA +L+G P +V++ + + +VE + R + EV Sbjct: 512 AGIDVMLDDRGERPGAMFADWELIGVPHRVVISDRGLKAGQVEYQGRCDEAASTVPAAEV 571 Query: 435 INYASHRFSN 444 + R + Sbjct: 572 AAFVKGRLRS 581 >gi|330807862|ref|YP_004352324.1| proline--tRNA ligase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375970|gb|AEA67320.1| Proline--tRNA ligase (proline tRNA synthetase) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 571 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 114/237 (48%), Positives = 160/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + + V AI+REE Sbjct: 1 MRTSQYLLATQKETPSDAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G++E+ +P Q A+LW ESGR++ YG E+LR+ DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MDAAGSLEVLMPGTQPAELWQESGRWEEYGPELLRIKDRHGRDFCAGPTHEEVITDLMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKD+YSF + +Y++M + Sbjct: 121 ELSSYKQLPINLYQIQTKFRDEIRPRFGLMRGREFIMKDSYSFHADLASLQITYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF RLGLK P+ A++G IGG SHEF VLA++GE + + D+ E Sbjct: 181 YCNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVF-SNGSDYAANIEKA 236 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 113/207 (54%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ K RGIEVGHIF G KYS M Sbjct: 364 DDKHYFGVNWERDLPVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGNKYSKAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK ++MG YGIG RVVAA IE ++D KGIIW D++APF+I+L+ ++ Sbjct: 424 KCEVLGENGKPVTLEMGCYGIGVSRVVAAAIEQNNDEKGIIWSDTLAPFQIALVPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + R+A +K+YA L+ G +V DD + G +FA +L+G P +++V + +++ + Sbjct: 484 DLVREATDKLYAELTAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNL 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K R + + + +V+++ R Sbjct: 544 EYKSRTEAEPQALPVADVLSFLQARIR 570 >gi|313159213|gb|EFR58586.1| threonine--tRNA ligase [Alistipes sp. HGB5] Length = 650 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 85/451 (18%), Positives = 160/451 (35%), Gaps = 42/451 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD L L + +G+ WLP G D + +R Q Sbjct: 229 EYLVMMEEAKKRDHRKLGKDLELF-CFSQRVGQGLPLWLPKGAALRDRLEQFLRNVQKEY 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRN--DKAMIYGPTHEEVMTDIFRSHI 122 G ++ P + + +L+V SG Y YGK+ + + + P + +I+RS Sbjct: 288 GYQQVITPHIGNKELYVTSGHYAKYGKDSFQPIHTPIEGEEYLLKPMNCPHHCEIYRSKP 347 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY+ LP + +R E G+ R R F DA+ F + + + ++ Sbjct: 348 RSYKELPVRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFVRPDQLLEE-FERVIDIV 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L IF L + + D + + D S + Sbjct: 407 LYIFKTLKFDNYTAQISLR--------------DPNNKEKYIGSDENWEKAESAIMQAAE 452 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 LN++VE A Y D + D++ ++ ++ Sbjct: 453 EKGLNTVVEYGEAAFYGPKLDFM---VKDAIGRKWQLGTIQVDYNLP--------ERFDL 501 Query: 301 TFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 T+KG D + + G+M AV+ GK +W + + + Sbjct: 502 TYKGADDKLHRPIMIHRAPFGSMERFVAVLLEHTGGKFPLW------LSPQQVVVLPISE 555 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D +++ L++ DD E+IG + +L P +IVG K ++ V ++ Sbjct: 556 KFNDYAQQVAEYLNRSDVRTEVDDRNEKIGRKIRDNELKRIPYLLIVGEKEEAEGLVSVR 615 Query: 420 HRLTGIREDMSLEEVINYA----SHRFSNNR 446 + G + M+LE ++ N+ Sbjct: 616 AQGEGDKGQMTLEGFRDFIAGLVKEEIEANK 646 >gi|312879874|ref|ZP_07739674.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Aminomonas paucivorans DSM 12260] gi|310783165|gb|EFQ23563.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Aminomonas paucivorans DSM 12260] Length = 631 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 72/439 (16%), Positives = 137/439 (31%), Gaps = 41/439 (9%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E RD +L L + + + G + P G L + + E R G Sbjct: 229 LKRLEEAKQRDHRKLGRELDLFS--LQPEAPGFPFFHPKGMVVLGELVNFWKREHQRRGY 286 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M +++ P + +F+S +SYR Sbjct: 287 CEIRTPLILDRALWERSGHWDHYRDNM-YFTTIDERPFAIKPMNCPGGILVFKSSTRSYR 345 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ R E G+MR R F DA+ + + ++ + ++ Sbjct: 346 DLPLRMGELGTVHRHERSGVLHGLMRVRCFTQDDAHLYCTPDQVAQE-IAGVIDLMRYVY 404 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + + + P + + + Sbjct: 405 KDVFGFPYRVELSTRPEN-----------------YMGELSLWNLAEQKLQEALEATGTP 447 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + A Y D H E R + G I + + G Sbjct: 448 YKVNPGDGAFYGPKIDFHLED----------CIGRTWQCGTI-QLDFQMPEKFDVAYIGP 496 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG +H + G++ ++ + G W V + + Sbjct: 497 DGAEHRPVMLHRTVFGSLERFLGILIEHYAGAFPYWLAPVQAKILPVST------DLLPY 550 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ L G D E++G + A L P +++G + V ++ R+ G Sbjct: 551 AREVEGILQSWGVRTETDTREEKLGRKIRDAQLSKVPYMLVLGGREAESRTVAVRERVRG 610 Query: 425 IREDMSLEEVINYASHRFS 443 +SLE + ++ Sbjct: 611 DLGSLSLEALKEMLEGEYA 629 >gi|88803834|ref|ZP_01119357.1| threonyl-tRNA synthetase [Polaribacter irgensii 23-P] gi|88780362|gb|EAR11544.1| threonyl-tRNA synthetase [Polaribacter irgensii 23-P] Length = 646 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 88/440 (20%), Positives = 162/440 (36%), Gaps = 37/440 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L T + G+ WLP G + +++ Q + G Sbjct: 231 YLALLEEAKQRDHRKLGRELELFT-FSQKVGAGLPLWLPKGAALRGRLEDFLKKAQKKAG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHIK 123 + P + +L+V SG Y+ YG + + + D+ + P + +++ Sbjct: 290 YEMVMTPHIGQKELYVTSGHYEKYGADSFQSIKTPKMDEEFLLKPMNCPHHCEVYNFKPY 349 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP F + +R E G+ R R F DA+ F TPE + + L Sbjct: 350 SYKDLPKRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFC-TPEQLDQEFKDVIDLVL 408 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +F LG + + I + E + + + + + D Sbjct: 409 YVFSSLGFEDFTAQVS---IRDKNTPE----------KYIGDVETWEIAENAIISAATDK 455 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + E A Y D + D+L + ++ ++ T+ Sbjct: 456 GLSFVVEEGEAAFYGPKLDFM---VKDALGRSWQLGTIQVDYNLP--------KRFDLTY 504 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 KGAD + H + G+M AV+ + G +P + P ++ L+ I Sbjct: 505 KGADNQLHRPVMIHRAPFGSMERFIAVLL---EHTGGNFPLWLTPDQVILLPISDK---Y 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + EK+ L D+ E+ G + A++ P VIVG K + V ++ Sbjct: 559 QKYSEKVLESLENSEIRALADNRNEKTGRKIRDAEVSKTPYMVIVGEKEEQEGTVSVRKH 618 Query: 422 LTGIREDMSLEEVINYASHR 441 G ++EE I+ Sbjct: 619 GEGDIGTFTIEEFISLIKTE 638 >gi|307298932|ref|ZP_07578734.1| threonyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2] gi|306915357|gb|EFN45742.1| threonyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2] Length = 648 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 87/439 (19%), Positives = 163/439 (37%), Gaps = 39/439 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +++E RD L L T + ++++ G+ +LP G + L+ + RE+ G Sbjct: 238 YLRMIEEAKKRDHRKLGPALGLFT-INYEYAPGMPVFLPKGTEMLNQLLQFSREKHVEDG 296 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+S P + S LW SG +D Y M ++ D+ P + +++S SY Sbjct: 297 YREVSTPQIMSDALWRTSGHWDHYRDNM-YFTEKEDQQFAVKPMNCPGHIIVYKSSSVSY 355 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ R E G+ R R F+ DA+ F + + Sbjct: 356 RDLPMKLFEFGKVHRYERSGVLHGLFRVRGFVQDDAHIFCTREQIQQEI----------- 404 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 +G+ + I + E+ T + D + Sbjct: 405 ---MGVIDFVQK-----IYSPFNFEYRAELSTRPEDYMGEVELWDIATKALEDSLLAKKM 456 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H + DSL + + ++ FG KY P + ++ Sbjct: 457 EFKVNEGDGAFYGPKIDYH---IKDSLGREWQCATIQLDFMMPERFGIKYVGPDNEEYQ- 512 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 V + G++ ++ + +P +AP ++S+I I + Sbjct: 513 ------PVMIHRAIFGSVERFMGILI---EHFAGAFPAWLAPTQVSVIPIADRHA---EY 560 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E + A L G V DD + + A L+ P +IVG + D + ++ R Sbjct: 561 AESVAAELKSRGFRVEVDDRQKSTNYKIREAQLMKVPYMIIVGDREKEDGTISVRLRSEK 620 Query: 425 IREDMSLEEVINYASHRFS 443 ++L+E ++ S + Sbjct: 621 DLGSIALQEFMDKLSQEVN 639 >gi|261344716|ref|ZP_05972360.1| hypothetical protein PROVRUST_05973 [Providencia rustigianii DSM 4541] gi|282567158|gb|EFB72693.1| proline--tRNA ligase [Providencia rustigianii DSM 4541] Length = 576 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 123/235 (52%), Positives = 160/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SH+LMLR GMI + + G+Y WLP G + L V I+REE Sbjct: 1 MRTSKYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYDWLPTGVRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MENAGAIEVSLPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP +QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + E + +Y+ M+ + Sbjct: 121 EITSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQESLQETYDAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+G + A++G IGG+ SHEF VLA +GE V DF E Sbjct: 181 YSKIFTRIGFDFRAVLADTGSIGGNASHEFQVLAQSGEDDVVF-STESDFAANIE 234 Score = 186 bits (472), Expect = 7e-45, Method: Composition-based stats. Identities = 74/194 (38%), Positives = 115/194 (59%), Gaps = 3/194 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P T D+ N + D P+ K + RGIEVGHIF GTKYS M A+ + +G + V Sbjct: 380 PLPETYDLRNVVVGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSEAMKASVQNEEGHNQIV 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG R+VAA IE SHD +GIIW D++APF+++++ + H ++ EK+YA Sbjct: 440 TMGCYGIGVTRIVAAAIEQSHDDRGIIWSDAIAPFQVAILPMNMHKSYRVKEVAEKLYAD 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV +DD E+ G FA +L+G P +++G + + ++VE K R + + + L Sbjct: 500 LKAQGIDVIFDDRKERPGVMFADMELIGVPYTIVIGDRNLDTNQVEYKSRRSDDKALVGL 559 Query: 432 EEVINYASHRFSNN 445 + V+++ + + N Sbjct: 560 DNVVSFLKEKLATN 573 >gi|303248073|ref|ZP_07334338.1| prolyl-tRNA synthetase [Desulfovibrio fructosovorans JJ] gi|302490472|gb|EFL50380.1| prolyl-tRNA synthetase [Desulfovibrio fructosovorans JJ] Length = 575 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 131/237 (55%), Positives = 170/237 (71%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y+ P L+E P +AE+ SHKL+LR GMI + + GIY++LPLG KAL+NV I+REE Sbjct: 1 MRLSRYYAPTLKETPAEAEVVSHKLLLRAGMIRKLTAGIYTYLPLGLKALNNVARIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q ADLW ESGR++ YG+E+LR DR+++ GPTHEEV+TD+ R Sbjct: 61 MDRAGALEILMPAVQPADLWKESGRWEFYGRELLRFVDRHEREFCLGPTHEEVVTDLVRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD G+ SY M+ + Sbjct: 121 EIRSYRQLPINLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFDKDDAGADASYWAMYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y+RIF RLGLK + A+SG IGG SHEF+VLA+TGE + DF E Sbjct: 181 YIRIFERLGLKFRAVSADSGAIGGSFSHEFMVLAETGEDTIAYCDAC-DFGANVEKA 236 Score = 168 bits (426), Expect = 2e-39, Method: Composition-based stats. Identities = 69/188 (36%), Positives = 111/188 (59%), Gaps = 2/188 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A + +D+ D P+ A+GIEVGH+F G KYS ++ATF GK Sbjct: 372 GRDAAILSFTDLRQVAPGDPCPKCGAPLSFAKGIEVGHVFKLGLKYSKSLNATFLDEAGK 431 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + ++ MG YGIG R+VAA IE ++D GI++P ++APF+++L+N+ A D +++ Sbjct: 432 EQFMIMGCYGIGVSRIVAACIEQNNDASGIVFPPAIAPFEVALLNLNAKDAEASAKADEL 491 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 Y L+ G + DD E+ GS+F ADL+GFP+Q+ +G K ++ VE K R TG + + Sbjct: 492 YDALTAAGIETLLDDREERPGSKFKDADLMGFPIQLTLGGKGLARGIVETKDRRTGEKGE 551 Query: 429 MSLEEVIN 436 + L+ ++ Sbjct: 552 LPLDGFMD 559 >gi|160872889|ref|ZP_02063021.1| prolyl-tRNA synthetase [Rickettsiella grylli] gi|159121688|gb|EDP47026.1| prolyl-tRNA synthetase [Rickettsiella grylli] Length = 572 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 129/235 (54%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S ++LP L+E P DAEI SH+LMLR GMI + + GIYSWLPLG + L V I+REE Sbjct: 1 MRSSHFYLPTLKEAPADAEIKSHQLMLRAGMIRKVASGIYSWLPLGLRVLRKVETIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR A E+ +P LQ A+LW ES R+++YG E+LRL DR+ +A GPTHEE++T + R Sbjct: 61 MNRIHAQEVLLPILQPAELWQESERWEAYGPELLRLTDRHQRAFCLGPTHEEIITALVRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF +Y M S Sbjct: 121 EVRSYKQLPLIFYQIQTKFRDEIRPRFGVMRAREFMMKDAYSFHPDKTSLSETYQMMHAS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGLK + A++G IGG SHEF VLA TGE +F S D+ +E Sbjct: 181 YCRIFTRLGLKFRVVLADTGNIGGSQSHEFQVLAQTGEDHIFYSDR-SDYAANAE 234 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 3/196 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 P +D+ ++ D P+ K RGIEVGHIF G KY+ M+A + + Sbjct: 373 GRDCPLPPIADLRKVRVGDPSPDGKGRLKMERGIEVGHIFQLGNKYACAMNARITTSHAR 432 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEK 367 + ++MG YGIG RVV IE HD +GIIWP ++APF++ +I I H ++ ++A + Sbjct: 433 EIPMEMGCYGIGISRVVGGAIEQCHDDQGIIWPSAMAPFQVVIIPIAYHRNRSVKEAADT 492 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +Y +L + DV DD E+ G FA DL+G P ++++ K + + V K R+ Sbjct: 493 LYQQLQQARIDVLLDDRKERPGKLFADNDLIGIPHRLVINEKMILEKTVAYKARIEKHEH 552 Query: 428 DMSLEEVINYASHRFS 443 ++LE ++N+ + + Sbjct: 553 PVNLENILNFLHQKIN 568 >gi|15643503|ref|NP_228549.1| threonyl-tRNA synthetase [Thermotoga maritima MSB8] gi|8928373|sp|Q9WZJ9|SYT_THEMA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|4981265|gb|AAD35821.1|AE001744_11 threonyl-tRNA synthetase [Thermotoga maritima MSB8] Length = 640 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 88/443 (19%), Positives = 167/443 (37%), Gaps = 41/443 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E R D +L L + +++ G+ +LP G L+ + RE G Sbjct: 229 YLKFLEEAQRRDHRKLGPQLELFM-LNTEYAPGMPFFLPKGVVVLNELMKFSRELHRERG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW SG +D Y + M +++++ P + +++S SY Sbjct: 288 YQEIFTPLIMNEQLWKISGHWDHYAENM-YFIEKDEERYAVKPMNCPGHILVYKSRTVSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F++ R E G+MR R F DA+ F TP+ + + I Sbjct: 347 RDLPLRFFEFGRVHRYERSGVLHGLMRVRSFTQDDAHIFC-TPDQIEEEILGVLDLINTI 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G V T + + + + Sbjct: 406 YSQFGFTYR------------------VELSTMPEDHMGDEAIWEKATTALKNALERAGL 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H + DS+ + + ++ + T+ G Sbjct: 448 SYKVNEGEGAFYGPKIDFH---IRDSIGREWQCATIQLDF--------MMPEKFNVTYIG 496 Query: 305 ADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D K+H V + G++ ++ G W +AP ++++I I + D Sbjct: 497 PDNKEHRAVMIHRAIYGSLERFFGILIEHFAGAFPTW---LAPIQVAVIPI---SEKHND 550 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 EK+ R+S+ G VF+D+ E +G + A P +I+G K + K+ ++ R Sbjct: 551 GAEKVARRISQEGFRVFFDNRRETLGYRIRQAQTQKIPYMIIIGDKELESGKISVRTRTG 610 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 +D+ E + + + + Sbjct: 611 KEIKDVDPEHFVETLRNEVLSRK 633 >gi|332141016|ref|YP_004426754.1| threonyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype'] gi|238693239|sp|B4RSL8|SYT_ALTMD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|327551038|gb|AEA97756.1| threonyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype'] Length = 638 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 78/447 (17%), Positives = 143/447 (31%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E RD L L + + G+ W G + + +R++ Sbjct: 227 KQLKSYLQRLEEAEKRDHRKIGKALNLF--HWQEEAPGMVFWHNDGWSIYTELESFVRKK 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E+ P + LW +SG +D Y + M + + P + IF Sbjct: 285 LREYGYDEVKGPLMMDRSLWEKSGHWDKYAENMFT-TESEKREYAVKPMNCPGHVQIFNQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F + + + Sbjct: 344 GLKSYRDLPLRMAEFGCCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQILEE-VSGCIK 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + G ++I ++ + P + E D + Sbjct: 403 MVYETYAAFGFENIKVKLSTRPEKRVGADE-----------------IWDKSEAALAEAL 445 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 A Y + L D L + ++ G+ Sbjct: 446 KANDIEFDYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFSMPGRLGS------- 495 Query: 300 ATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 T+ DG+ V + +G++ ++ G +W +++ Sbjct: 496 -TYVAEDGERKVPVMIHRAILGSLERFIGILTEEFAGFFPLWLAPQQVVVMNIT------ 548 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D +L +G D E+IG + L P ++VG K + +V + Sbjct: 549 DKQADYASDCVKKLQDLGFRAKSDLRNEKIGFKIREHTLKRIPYMLVVGDKEMEAGEVAV 608 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R M LE+ I A Sbjct: 609 RSRRGDDLGKMGLEDFIAMAQQEVVEK 635 >gi|317493988|ref|ZP_07952404.1| prolyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917761|gb|EFV39104.1| prolyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 572 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+W+P G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWMPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDMVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + E + +Y+KMF + Sbjct: 121 EISSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHTSQESLQETYDKMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+ L P++A++G IGG+ SHEF VLA +GE V DF E Sbjct: 181 YSKIFSRMDLDFRPVQADTGSIGGNASHEFQVLAQSGEDDVVF-SSESDFAANIE 234 Score = 173 bits (438), Expect = 6e-41, Method: Composition-based stats. Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K + RGIEVGHIF GTKY+ + AT +G DG++ + Sbjct: 380 PLPLVADIRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGTKYTEALKATVQGEDGRNQLM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWPD++APF+++++ + H +D E +Y Sbjct: 440 TMGCYGIGVTRVVAAAIEQNHDERGIIWPDAIAPFQVAILPMNMHKSFRVKDLAESLYNS 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P V++G + + ++E K+R G ++ + Sbjct: 500 LRSKGIDVIMDDRKERPGVMFADMELIGVPHTVVIGDRNLDSDEIEYKNRRNGEKQMIKT 559 Query: 432 EEVINYASHRFS 443 E+ ++ + Sbjct: 560 GEIEDFLLAQIK 571 >gi|1565235|emb|CAB02510.1| Threonyl tRNA Synthetase [Bacillus subtilis subsp. subtilis str. 168] Length = 601 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 145/442 (32%), Gaps = 44/442 (9%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L M + + G+ +LP GQ + + RE Q G Sbjct: 198 LHMLEEAAKRDHRKLGKQLGLF--MFSEEAPGMPFYLPKGQIVRNELERFSRELQTNAGY 255 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + + LW +SG +D Y M ++ +D P + IF++ + SYR Sbjct: 256 DEVRTPFMMNQRLWEQSGHWDHYRDNM-YFSEVDDTRFAMKPMNCPGHMLIFKNSLYSYR 314 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R E G++R R F DA+ F + + + Sbjct: 315 DLPIRMAEFGQVHRHEYSGALNGMLRVRTFCQDDAHIFVREDQIESEIKEAIRLI----- 369 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + E+ V T + + +++ Sbjct: 370 --------------DEVYRTFGFEYSVELSTRPEDSLGDDSLWEASERALARVLEELGLS 415 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y D H + D+L + + + ++ F K+ T+ Sbjct: 416 YEINEGDGAFYGPKIDFH---IKDALKRSHQCATIQLD----FQMPEKFD----LTYINE 464 Query: 306 DGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + R +IE + V D Sbjct: 465 LNEKVRPVVIHRAVFGSIDRFFGILIEHYGGAFPVWLAPIQVQIIPV-------SHVHLD 517 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C K+ A L + G D+ E++G + + + P +++G ++ V ++ Sbjct: 518 YCRKVQAELKQAGIRAGIDERNEKLGYKIRESQVQKIPYVLVLGDHEEQENAVNVRRFGH 577 Query: 424 GIREDMSLEEVINYASHRFSNN 445 E + + + + N Sbjct: 578 QQNEHVPFQTFKDKLVKQVENR 599 >gi|282881717|ref|ZP_06290380.1| threonine--tRNA ligase [Prevotella timonensis CRIS 5C-B1] gi|281304476|gb|EFA96573.1| threonine--tRNA ligase [Prevotella timonensis CRIS 5C-B1] Length = 655 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 82/444 (18%), Positives = 152/444 (34%), Gaps = 38/444 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD ++ L + KG+ WLP G + + ++R Q R Sbjct: 232 EYLTMLEEAKKRDHRKIGKEMELFM-FSERVGKGLPIWLPKGTELRLRLQDMLRNIQRRY 290 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P + S +L+V SG Y YGK+ + D+ + P + ++F Sbjct: 291 GYQEVITPHIGSKNLYVTSGHYAHYGKDSFQPIHTPEEDEEYMLKPMNCPHHCEVFAYKP 350 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + +R E G+ R R F DA+ F + M Sbjct: 351 RSYKDLPLRIAEFGTVYRYEKSGELHGLTRVRSFTQDDAHIFCRPDQVKNEFLRVM---- 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++A D I L D + + + D + D Sbjct: 407 -----------DIIQAVFKIFNFDNFEAQISLRDPKDKEKYIGSDEVWAESEQAIIDACK 455 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L++ VE A Y D + D++ ++ ++ F Sbjct: 456 EKGLDAKVEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLPQRF--------KL 504 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D + G++ AV+ G +W + I + Sbjct: 505 EYTDEDNSKRTPVMVHRAPFGSLERFTAVLIEHTAGHFPLW------LTPDQVAILPISE 558 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ++ + + DD E+IG + +L P VIVG K +D V ++ Sbjct: 559 KYNAYARQVAKQFAAQQVRATIDDRNEKIGRKIRDNELKRVPYMVIVGEKEAADGLVSMR 618 Query: 420 HRLTGIREDMSLEEVINYASHRFS 443 R G + + ++E I ++ + Sbjct: 619 ERGGGEQATLRVDEFIARINNEVA 642 >gi|118602649|ref|YP_903864.1| threonyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166225495|sp|A1AWT6|SYT_RUTMC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|118567588|gb|ABL02393.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 632 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 76/438 (17%), Positives = 141/438 (32%), Gaps = 41/438 (9%) Query: 8 LPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E R D L I + + G+ W G + +R Sbjct: 232 LHRLEEASRRDHRKIGKIQDLF--HIQEEAPGMIFWHAKGWTLCQLIEQYMRGIFKDNDY 289 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P L LW +SG ++ +G M ++ P + I+ +KSYR Sbjct: 290 QEVHTPQLIDKSLWEKSGHWEKFGDTMFT-TSSENRDYAVKPMNCPAHIQIYNQGLKSYR 348 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F+ D + F + + ++ Sbjct: 349 DLPLRLAEFGSCHRNEPSGTLHGIMRVRNFVQDDGHIFCTPEQIQVE-VSTFIDLTFAVY 407 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G + ++ + P S E A+ + +K Sbjct: 408 KHFGFDKVDIKLSTRPENHVGSDEVWDKAEAALAEALDAKVIKWE--------------- 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + A Y + L D L + ++ + A F Sbjct: 453 --FQKGEGAFYGPKIEF---VLKDCLERQWQCGTLQVDFSMP--------ERLDAQFIDE 499 Query: 306 DGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + + +G++ ++ ++G W + P + +INI D Sbjct: 500 NNIKQTPVVLHRAILGSLERFVGILIEHYEGAYPCW---LTPIQAVVINISGK---QADF 553 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 I +L K G V D E+IG + L +P +IVG + + ++ ++ R Sbjct: 554 VIDITKKLKKQGLRVISDLRNEKIGFKIREHSLQRYPYILIVGDREMEKDQISVRQRGGK 613 Query: 425 IREDMSLEEVINYASHRF 442 MS+E + + Sbjct: 614 DLGVMSIEAFVEKINQEI 631 >gi|312173361|emb|CBX81615.1| Prolyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158] Length = 572 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 120/235 (51%), Positives = 163/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LRL DR+D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRLVDRSDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M + Sbjct: 121 ELSSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQGSLQETYDAMHRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y + F R+GL ++A++G IGG+ SHEF VLA +GE + D+ E Sbjct: 181 YSQSFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVF-SSESDYAANIE 234 Score = 179 bits (453), Expect = 1e-42, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 108/192 (56%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ K RGIEVGHIF GTKYS M A+ +G DG++ + Sbjct: 380 PLPRIADIRNVVEGDASPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKASVQGEDGRNQIL 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYAR 371 MG YGIG R+VAA IE +HD +GIIW ++APF+++++ + ++ E +Y + Sbjct: 440 TMGCYGIGITRIVAAAIEQNHDERGIIWSPALAPFQVAILPMNMQKSFRVKELAEALYHQ 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P ++VG + + +VE K R G + + Sbjct: 500 LRAKGIDVILDDRKERPGVMFADMELIGVPHTIVVGERHLDSEEVEYKSRRAGEKRMIKT 559 Query: 432 EEVINYASHRFS 443 E+I++ + Sbjct: 560 NEIIDFLVEELA 571 >gi|325266259|ref|ZP_08132938.1| proline--tRNA ligase [Kingella denitrificans ATCC 33394] gi|324982221|gb|EGC17854.1| proline--tRNA ligase [Kingella denitrificans ATCC 33394] Length = 569 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 118/239 (49%), Positives = 160/239 (66%), Gaps = 1/239 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A + SHKLMLR G+I ++ G+Y+W+P+G + L V I+REE Sbjct: 1 MKASQFFISTLKEAPAEAALPSHKLMLRAGLIKANASGLYTWMPMGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q ADLW ESGR+D YG E+LR+ DR+D + PT EE++TDI R Sbjct: 61 MNRAGAIELLMPVIQPADLWKESGRWDFYGDELLRITDRHDNEFCFSPTCEEMVTDIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FY IQ KFRDE RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 121 EVNSYKQLPKNFYHIQTKFRDERRPRFGVMRAREFVMKDAYSFHADFASLQETYQAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y R+F RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCRVFGRLGLNFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSD-ASDYAANVELAQT 238 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 104/196 (53%), Gaps = 3/196 (1%) Query: 251 QWTAPYAATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A +D+ N D + ARGIEVGH+F KYS ++A+F +GK Sbjct: 374 GRDAAEPEFADIRNVVAGDPSPCGKGSLQLARGIEVGHVFQLRDKYSAALNASFLDNNGK 433 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 ++MG YGIG RVVAA IE +HD +GIIW D++APF ++ + + R+A +K Sbjct: 434 SQIMEMGCYGIGITRVVAAAIEQNHDERGIIWTDTMAPFAAVIVPMNYKKSEAVREAADK 493 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 IYA L G DV DD E+ G A ++LLG P ++++G + + + VE R + Sbjct: 494 IYADLLAAGVDVLLDDRDERAGVLLADSELLGIPHRIVIGDRGLKEGNVEYARRTDSEAQ 553 Query: 428 DMSLEEVINYASHRFS 443 + + ++ + + + Sbjct: 554 SVPVGDIAAHVAAQLR 569 >gi|330959255|gb|EGH59515.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 571 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 116/237 (48%), Positives = 163/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M ++ Sbjct: 121 ELNSYKQLPINLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADNASLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF RLGLK P+ A++G IGG SHEF VLA++GE + + D+ E Sbjct: 181 YSNIFSRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVF-SNGSDYAANIEKA 236 Score = 156 bits (395), Expect = 6e-36, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 111/207 (53%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ K RGIEVGHIF GTKYS M Sbjct: 364 DDKHYFGVNWERDLPVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGTKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK + MG YGIG RVVAA IE + D GIIW D++APF+I+LI ++ Sbjct: 424 KCQVLGENGKPVNLAMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALIPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 R+A +++YA L+ G +V DD + G +FA +L+G P +++V + +++ + Sbjct: 484 DAVREATDRLYAELTGAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNL 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K R + +++ +V+++ R Sbjct: 544 EYKSRTESQPQAIAVADVLSFIQGRVK 570 >gi|332521036|ref|ZP_08397494.1| threonyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4] gi|332043129|gb|EGI79326.1| threonyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4] Length = 644 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 77/447 (17%), Positives = 156/447 (34%), Gaps = 38/447 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD +L L T + G+ WLP G + + ++ Q Sbjct: 226 LTEYLALLEEAKKRDHRKLGKELELFT-FSQKVGAGLPLWLPKGTALRERLENFLKAAQK 284 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRS 120 + G + P + +L+V SG Y YG++ + ++D+ + P + +I+ + Sbjct: 285 KAGYEMVMSPHIGQKELYVTSGHYAKYGEDSFQPIKTPKDDEEFLLKPMNCPHHCEIYNA 344 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 SY++LP + + +R E G+ R R F DA+ F TP+ + + Sbjct: 345 SQWSYKDLPKRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFC-TPDQLDAEFKNVID 403 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L +F LG ++ + D + + Sbjct: 404 LVLYVFGSLGFENFTAQVSLR--------------DPENPEKYIGSLENWEKAEQAIISA 449 Query: 240 DDIISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 LN ++E A Y D + D+L ++ ++ Sbjct: 450 AKDKGLNYVIETGEAAFYGPKLDFM---VKDALGRQWQLGTIQVDYNLP--------ERF 498 Query: 299 SATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+KG+D + H + G+M A++ G +W + ++I Sbjct: 499 DLTYKGSDNELHRPVMIHRAPFGSMERFIAILLEHTGGNFPLW------LMPNQVSILTL 552 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + EK+ L D+ E IG + A++ P +I+G ++K+ Sbjct: 553 SEKYEKYGEKVLNLLENHEIRALIDNRSETIGKKIREAEMNKTPYMIIIGENEEKENKIS 612 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSN 444 ++ +S+E+ + Sbjct: 613 VRQHGGEDLGTISVEDFSEIVKTEINK 639 >gi|330877991|gb|EGH12140.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race 4] Length = 412 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 117/237 (49%), Positives = 163/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M ++ Sbjct: 121 ELNSYKQLPINMYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADHASLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF RLGLK P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSD-GSDYAANIEKA 236 >gi|170717553|ref|YP_001784641.1| threonyl-tRNA synthetase [Haemophilus somnus 2336] gi|189083611|sp|B0UU42|SYT_HAES2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|168825682|gb|ACA31053.1| threonyl-tRNA synthetase [Haemophilus somnus 2336] Length = 642 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 71/442 (16%), Positives = 136/442 (30%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD L L + + + G+ W G + +R + Sbjct: 232 YLHRLEEAAKRDHRKIGKALNLY--HMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYD 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +G + +Y +++ ++ P + IF +KSY Sbjct: 290 YQEVKGPFMMDRVLWERTGHWQNY-ADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F T + + I Sbjct: 349 RDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFC-TEDQIESEVTSCIKMVYDI 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ + P D Sbjct: 408 YSTFGFTDIFVKLSTRPEKR-----------------IGEDVMWDRAEQGLANALKHNGL 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y + L D L + ++ AT+ Sbjct: 451 EYEIQEGEGAFYGPKIEF---ALRDCLDREWQCGTIQLDFALPGRLD--------ATYVA 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G++ +I + G W + +++ D Sbjct: 500 EDNARRTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPIQAVVMNIT------DSQAD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +K+ + S+ G V D E++G + L P ++ G K + ++K+ ++ R Sbjct: 554 YVQKVVKQFSEAGLRVKADIRNEKVGFKIREHTLRRVPYMLVCGDKEIVENKIAVRTRKG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 S+EE + + Sbjct: 614 TDLGTFSVEEFVEILKQQVRKR 635 >gi|90408309|ref|ZP_01216474.1| prolyl-tRNA synthetase [Psychromonas sp. CNPT3] gi|90310610|gb|EAS38730.1| prolyl-tRNA synthetase [Psychromonas sp. CNPT3] Length = 573 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 125/237 (52%), Positives = 161/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L +E P DA I SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTTQYLLSTQKEAPSDAVIVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q ADLWVE+GR+D YG E+LRL DR+D+ + GPTHEEV+T++ R Sbjct: 61 MERAGAVEILMPVVQPADLWVETGRWDKYGGELLRLKDRHDRDFVLGPTHEEVVTELVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP +QIQ KFRDE RPRFGVMRSREF MKDAYSF L E + +Y MF + Sbjct: 121 EINSYKQLPLNLFQIQTKFRDETRPRFGVMRSREFTMKDAYSFHLEDECLEKTYQTMFSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF RLGL+ P+ A+SG IGG+ SHEF VLA +GE + D+ E Sbjct: 181 YCRIFERLGLEYRPVIADSGSIGGNSSHEFHVLAPSGEDAIAF-SSESDYAANVEKA 236 Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats. Identities = 67/187 (35%), Positives = 106/187 (56%), Gaps = 3/187 (1%) Query: 258 ATSDVHNEKLFD--SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T+D+ N + D + RGIEVGHIF G YS M+A+ GK+ + MG Sbjct: 385 ETADLRNVQEGDLSPCGKGTLSITRGIEVGHIFQLGKTYSEAMNASVLNQQGKNQTLTMG 444 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG R+VAA IE ++D GIIW +++APF + ++ + D E+ YA L Sbjct: 445 CYGIGISRIVAAAIEQNNDANGIIWNEALAPFSVVIVPMNMKKSHRVADLAERYYAELQA 504 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD E+ G FA A+L+G P +I+G + + + +E K+R +G ++D+ +E+V Sbjct: 505 AGIEVLFDDRKERPGVMFADAELIGIPHMLIIGDRSIDNGVIEYKNRKSGEKQDVKIEDV 564 Query: 435 INYASHR 441 I + + Sbjct: 565 IAFIKEQ 571 >gi|258516344|ref|YP_003192566.1| prolyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] gi|257780049|gb|ACV63943.1| prolyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] Length = 572 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 114/243 (46%), Positives = 162/243 (66%), Gaps = 1/243 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +AE+ SHKL+LR G I + + G+Y++LPL Q+ L + I+REE Sbjct: 1 MRASQLLIPTLRETPAEAEVISHKLLLRAGYIRRSAAGVYTYLPLAQRVLSKIKRIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G E+ +P +Q A+LW ESGR+D YG E+ RL DR+ + GPTHEE++T + +S Sbjct: 61 MDRQGGQEILMPIMQPAELWQESGRWDVYGPELFRLKDRHGRDFALGPTHEEIITALVKS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ K+RDE RPRFG++R REF+MKD YSFD G +Y KM+ + Sbjct: 121 ELSSYKQLPLLLYQIQNKYRDERRPRFGLLRGREFIMKDLYSFDADEAGLDITYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGET-QVFCSKDFMDFPIPSENTDF 239 Y+RIF R GL+ P+ A+SG IGG +HEF+VLA++GE VFC + + E Sbjct: 181 YVRIFQRCGLRFRPVEADSGAIGGSDTHEFMVLAESGEALVVFCQNENCSYAANVEKAQS 240 Query: 240 DDI 242 ++ Sbjct: 241 SEL 243 Score = 142 bits (359), Expect = 9e-32, Method: Composition-based stats. Identities = 66/190 (34%), Positives = 104/190 (54%), Gaps = 2/190 (1%) Query: 257 AATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 +D+ K + P V A+GIEVG +F G KYS + ATF+ +GK + M Sbjct: 379 GKIADIRFVKAGEPCPVCGGVLAEAKGIEVGQVFKLGDKYSKSLEATFQDENGKTRHYVM 438 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G YGIG R +AA IE +D GI WP ++APF + ++ + DQ D E +Y + Sbjct: 439 GCYGIGVSRTMAAAIEQHNDLNGITWPAAIAPFHLVIVPVNVKDQALMDISEVLYRSFLE 498 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G +F ADL+G+PL++ VG KF+ + +E++ R +G + EE+ Sbjct: 499 SGVEVVLDDRPERPGVKFKDADLVGYPLRLTVGKKFLEEGLLELRERRSGKTHFLKEEEI 558 Query: 435 INYASHRFSN 444 +++ + Sbjct: 559 LSFIKDFIKS 568 >gi|118580723|ref|YP_901973.1| threonyl-tRNA synthetase [Pelobacter propionicus DSM 2379] gi|166225474|sp|A1ARE5|SYT_PELPD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|118503433|gb|ABK99915.1| Ser-tRNA(Thr) hydrolase [Pelobacter propionicus DSM 2379] Length = 636 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 154/444 (34%), Gaps = 39/444 (8%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L L+E+ R D +L L + + G+ W P G + R E + Sbjct: 230 EAYLHRLEESKRRDHRRLGRELDLFS-FSDEVGAGLVIWHPKGAMLRTILEDFERREHLK 288 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + +LW SG Y++Y + M + ++++ P + I++SH++ Sbjct: 289 RGYDIVLGPQILKKELWQRSGHYENYRENM-YFTEVDEQSYGIKPMNCLAHMMIYKSHLR 347 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP ++++ R E G++R R F DA+ + + Sbjct: 348 SYRDLPLRYFELGTVHRHERAGVLHGLLRVRGFTQDDAHILCAPEQLDGE-IKGVLKFVS 406 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + G + + P + + + D Sbjct: 407 DVMAIFGFEYEM-ELSTRPEKS-----------------IGDDAAWELATEALLSALKDT 448 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I E A Y D+ KL D+L + + + F ++ L A Sbjct: 449 GRSFEINEGDGAFYGPKIDI---KLKDALDRRWQCATIQCD----FTLPERFDLQYVAA- 500 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 K V + +GA+ V+ + +P ++P + L+ + + Sbjct: 501 --DGEKKRPVMVHRVVLGAIERFIGVLI---EHYAGNFPLWLSPVQAMLVTVTDNH---I 552 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + + L + G V D E++ + A L P +++G K + + V + R Sbjct: 553 PYAQGVLEHLREAGIRVQGDFRNEKLSFKIREAQLQKVPYMLVIGDKEMESATVTPRFRD 612 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 M E+ + + N R Sbjct: 613 GKNLVAMKPEDFVAFVVEETKNFR 636 >gi|321313312|ref|YP_004205599.1| threonyl-tRNA synthetase [Bacillus subtilis BSn5] gi|320019586|gb|ADV94572.1| threonyl-tRNA synthetase [Bacillus subtilis BSn5] Length = 638 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 146/442 (33%), Gaps = 44/442 (9%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L M + + G+ +LP GQ + + RE Q G Sbjct: 235 LHMLEEAAKRDHRKLGKQLGLF--MFSEEAPGMPFYLPKGQIVRNELERFSRELQTNAGY 292 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + + LW +SG +D Y M ++ +D P + IF++ + SYR Sbjct: 293 DEVRTPFMMNQRLWEQSGHWDHYRDNM-YFSEVDDTRFAMKPMNCPGHMLIFKNSLYSYR 351 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R E G++R R F DA+ F + + + Sbjct: 352 DLPIRMAEFGQVHRHEYSGALNGMLRVRTFCQDDAHIFVREDQIESEIKEAIRLI----- 406 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + E+ V T + + +++ Sbjct: 407 --------------DEVYRTFGFEYSVELSTRPEDSLGDDSLWEASERALARVLEELGLS 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y D H + D+L + + + ++ F K+ T+ Sbjct: 453 YEINEGDGAFYGPKIDFH---IKDALKRSHQCATIQLD----FQMPEKFD----LTYINE 501 Query: 306 DGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + R +IE + V D Sbjct: 502 HNEKVRPVVIHRAVFGSIDRFFGILIEHYGGAFPVWLAPIQVQIIPV-------SHVHLD 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C K+ A L + G D+ E++G + + + P +++G ++ V ++ Sbjct: 555 YCRKVQAELKQAGIRAGIDERNEKLGYKIRESQVQKIPYVLVLGDHEEQENAVNVRRFGH 614 Query: 424 GIREDMSLEEVINYASHRFSNN 445 E +S + + + N Sbjct: 615 QQNEHVSFQTFKDKLVKQVENR 636 >gi|312886253|ref|ZP_07745867.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603] gi|311301278|gb|EFQ78333.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603] Length = 641 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 79/448 (17%), Positives = 157/448 (35%), Gaps = 39/448 (8%) Query: 2 RRSKY--FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 + S+ +L +++E RD +L L + G+ WLP G + + ++ Sbjct: 224 KASELTDYLHLIEEAKKRDHRKLGKELELFA-FSEKVGMGLPLWLPKGTALRERLVNFLQ 282 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTD 116 + Q + G ++ P + +L+V SG Y+ YG + + + + P + + Sbjct: 283 KAQVKAGYEQVITPHIGHKNLYVTSGHYEKYGADSFQPIKTPQEGEEFFLKPMNCPHHCE 342 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 I+++ +SY++LP F + +R E G+ R R F DA+ F P+ K + Sbjct: 343 IYKTKPRSYKDLPVRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCR-PDQVKEEFK 401 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 K+ L +F+ LG K + + + + + Sbjct: 402 KVIDLVLYVFNALGFKDYTAQVSLRDPENKA-------------KYIGTDENWAIAEAAI 448 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 ++ V A Y D + D+L ++ ++ Sbjct: 449 IESAEEKGLPTVHVTGEAAFYGPKLDFM---VKDALGRKWQLGTIQVDYNLP-------- 497 Query: 296 LPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + G+D + H + G+M AV+ G +W + + Sbjct: 498 ERFELEYTGSDNQKHRPVMIHRAPFGSMERFIAVLIEHCAGNFPLWLSPEQFIVLPI--- 554 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 + + +K+ L D E+IG + A++ P +IVG K ++ Sbjct: 555 ---SEKYEEYAKKLSDLLKDSDICGLIDFRDEKIGRKIRDAEVKKIPYMLIVGEKEEAEG 611 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRF 442 V ++ G MS+EE Sbjct: 612 MVSVRKHGEGDLGSMSIEEFTQKIKKEI 639 >gi|325954887|ref|YP_004238547.1| threonyl-tRNA synthetase [Weeksella virosa DSM 16922] gi|323437505|gb|ADX67969.1| threonyl-tRNA synthetase [Weeksella virosa DSM 16922] Length = 640 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 73/435 (16%), Positives = 150/435 (34%), Gaps = 36/435 (8%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L + +G+ WLP G + + ++Q + G + P Sbjct: 236 AKKRDHRKLGKELGLFA-FSEKVGQGLPLWLPKGAALRRKLENFLLKQQQKLGYEMVITP 294 Query: 73 TLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 + +L+V SG Y YG + + + + P + +I+++ SYR+LP Sbjct: 295 HIGQKELYVTSGHYAKYGADSFQPIQTPNEGEEFLLKPMNCPHHCEIYKTSQWSYRDLPK 354 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + + +R E G+ R R F DA+ F + + + + K+ L +F LG Sbjct: 355 RYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTSDQLLEE-FKKVIDLVLFVFESLG 413 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + + + + + + T + + Sbjct: 414 FDNYSAQISLRDPNNKE-------------KYIGTDENWEKAENAIITAAKEKNLPTVVE 460 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D + D+L ++ ++ ++ G D + Sbjct: 461 HGEAAFYGPKLDFM---VKDALGRQWQLGTIQVDYNLP--------ERFELSYIGPDNQA 509 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 H + G+M A++ + G +W + I + + EK+ Sbjct: 510 HRPVMIHRAPFGSMERFIAILLENTAGNLPLW------LTPDVFTILPISEKYVEFGEKV 563 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 L++ + D+ E+ G + A++ P +IVG K + V ++ G + Sbjct: 564 LNLLAEQEINGLIDNRNEKTGKKIRDAEVKKIPYMLIVGEKEEENGTVSVRKHGEGDLGE 623 Query: 429 MSLEEVINYASHRFS 443 M +EE I + Sbjct: 624 MKIEEFIQFVKKEMK 638 >gi|255534998|ref|YP_003095369.1| threonyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10] gi|255341194|gb|ACU07307.1| Threonyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10] Length = 639 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 77/444 (17%), Positives = 152/444 (34%), Gaps = 38/444 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD +L + + G+ WLP G + + E Q Sbjct: 226 LTEYLERLEEAKRRDHRKLGKELGIFA-FSEKVGAGLPLWLPKGAALRKKLENFLSEAQK 284 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRS 120 + G + P + + +L+V SG +D YG + + + + P + +I++ Sbjct: 285 KAGYEFVMTPHIGAKELYVTSGHWDKYGADSFQPIKTPNEGEEFMLKPMNCPHHCEIYKV 344 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 SY++LP F + +R E G+ R R F DA+ F + + + Sbjct: 345 GQWSYKDLPKRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCTPDQLLTE-FENVID 403 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L +F LG + + D + + D + Sbjct: 404 LTLYVFKSLGFEDFVTQISLR--------------DPENKEKYIGSDENWKKAENAIIQA 449 Query: 240 DDIISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 L ++VE A Y D + D+L + ++ ++ Sbjct: 450 AAKKGLKTVVEYGEAAFYGPKLDFM---VKDALGRSWQLGTIQVDYNLP--------ERF 498 Query: 299 SATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + G+D + H + G+M A++ + G +W + + Sbjct: 499 DLWYIGSDNEKHRPVMIHRAPFGSMERFIAILLENTAGDFPLWLAPDQFTILPI------ 552 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + D +K+ L DD E+ G + A++ P ++VG + V Sbjct: 553 SEKYADYAKKVSELLENHDICGLIDDRNEKTGRKIRDAEIKKLPFMLVVGETEELNGTVS 612 Query: 418 IKHRLTGIREDMSLEEVINYASHR 441 ++ R G MS+E+ I Y + Sbjct: 613 VRRRGEGDLGTMSVEDFIAYFKEQ 636 >gi|88810665|ref|ZP_01125922.1| threonyl-tRNA synthetase [Nitrococcus mobilis Nb-231] gi|88792295|gb|EAR23405.1| threonyl-tRNA synthetase [Nitrococcus mobilis Nb-231] Length = 641 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 80/445 (17%), Positives = 145/445 (32%), Gaps = 41/445 (9%) Query: 2 RRSKYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + +++L L+E R D + L + + + G+ W P G + + +R + Sbjct: 226 KALQHYLHALEEAQRRDHRRLAKIQDLF--HLQEEAPGMVFWHPNGWRVYLLLQDYLRAK 283 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P L LW SG + + +M + + P + IF Sbjct: 284 LDAHGYREVRTPELVDRSLWERSGHWQKFRADMFT-TESEKRDYAVKPMNCPCHVQIFNQ 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F+ DA+ F + Sbjct: 343 GLKSYRDLPLRLAEFGNCHRNEASGTLHGLMRVRNFVQDDAHIFCTEEQIQSE-VAGFLD 401 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + + + P + D + + Sbjct: 402 LAEAVYRDFGFDEVIVALSTRPEQR-----------------VGADALWDKAEQALDQAL 444 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + A Y ++ + DSL + ++ G Sbjct: 445 RARRLDWEVKPGEGAFYGPKIEL---SMKDSLGRVWQCGTMQVDFSMPQRLG-------- 493 Query: 300 ATFKGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + DG V + G+ V+ + G WP +AP + ++NI Sbjct: 494 AQYVAEDGARLVPVMLHRAIFGSFERFIGVLI---EHYGGAWPVWLAPIQAVVLNITDR- 549 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 I RL++ G + D E+IG + L P +IVG + V + Sbjct: 550 --QGAYASGIEKRLAEHGFRAYGDLRNEKIGFKIREHTLQKVPYLLIVGERERESMTVAV 607 Query: 419 KHRLTGIREDMSLEEVINYASHRFS 443 + R M L+ I S + Sbjct: 608 RTREGEDLGSMPLKAFIERLSGEVA 632 >gi|229916382|ref|YP_002885028.1| threonyl-tRNA synthetase [Exiguobacterium sp. AT1b] gi|259516484|sp|C4L461|SYT_EXISA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|229467811|gb|ACQ69583.1| threonyl-tRNA synthetase [Exiguobacterium sp. AT1b] Length = 647 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 84/440 (19%), Positives = 168/440 (38%), Gaps = 33/440 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L + + +G+ WLP G V I +++ G Sbjct: 237 LRLLEEAKERDHRKLGKELDLF-FVSQEVGQGLPMWLPKGASIRRTVERYIVDKELELGY 295 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S DL+ SG +D Y +M + +++ ++ P + I++ +SYR Sbjct: 296 QHVYTPVLGSVDLYKTSGHWDHYQDDMFPKMEMDNEELVLRPMNCPHHMTIYKHEPRSYR 355 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ +++ + +TPE K + + ++ Sbjct: 356 ELPLRIAELGGMHRYEMSGALTGLQRVRYMVLNDGHTFVTPEQMKQEFKDIVHLIQEVYA 415 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSENTDFDDIISL 245 G+K R D + + + + + D++ Sbjct: 416 DFGIKDYRFRLS--------------YRDPADKEKYFDNDAIWEMAQSQLKETMDELELP 461 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y DV ++ +L + + +S ++ F ++ T+ G Sbjct: 462 YFEAEGEAAFYGPKLDV---QVRTALGKEETLSTVQLD----FLLPERFD----LTYTGP 510 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DGKDH + G + + + + +P +AP ++ LI + V + Sbjct: 511 DGKDHRPIVLHR--GVVSTMERFVAYLIEEYKGAFPTWLAPVQVKLIPV---SHVHDEYV 565 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 ++ A L K G V D E++G + A + P+ +++G K + V I+ Sbjct: 566 AEVKAELVKRGVRVETDLRDEKLGYKIREAQMKKIPMTLVLGDKERDERAVNIRRYGQQE 625 Query: 426 REDMSLEEVINYASHRFSNN 445 + SL+E I + +N Sbjct: 626 QVSASLDEFIASLTDEIANR 645 >gi|86134203|ref|ZP_01052785.1| Threonyl-tRNA synthetase [Polaribacter sp. MED152] gi|85821066|gb|EAQ42213.1| Threonyl-tRNA synthetase [Polaribacter sp. MED152] Length = 647 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 81/433 (18%), Positives = 148/433 (34%), Gaps = 36/433 (8%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L T + G+ WLP G + + ++ Q + G + P Sbjct: 238 AKKRDHRKLGKELELFT-FSQKVGAGLPLWLPKGAALRERLQNFLKAAQKKAGYEMVMTP 296 Query: 73 TLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 + +L+V SG Y+ YG++ + + D+ + P + +++ SY++LP Sbjct: 297 HIGQKELYVTSGHYEKYGEDSFQAIKTPKMDEEFLLKPMNCPHHCEVYNFKPYSYKDLPK 356 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F + +R E G+ R R F DA+ F TPE + ++ L +F LG Sbjct: 357 RFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFC-TPEQLDQEFKEVIDLVLYVFGSLG 415 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + + + + + + + D I Sbjct: 416 FEDFTAQVSIRDME-------------NLDKYIGDVETWEIAENAIISAAKDKGLDYVIE 462 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 E A Y D + D+L + ++ ++ T+ G+D + Sbjct: 463 EGEAAFYGPKLDFM---VKDALGRSWQLGTIQVDYNLP--------KRFDLTYTGSDNQS 511 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 H + G+M AV+ G +W + I + EK+ Sbjct: 512 HRPVMIHRAPFGSMERFIAVLLEHTGGNFPLW------LTPEQVIILPISDKYQKYTEKV 565 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 L DD E+ G + A++ P VIVG K D V ++ G Sbjct: 566 LESLENSEIRALVDDRSEKTGRKIRDAEVSKIPFMVIVGEKEEQDGTVSVRKHGEGDIGT 625 Query: 429 MSLEEVINYASHR 441 ++EE + Sbjct: 626 FTIEEFKSLIKEE 638 >gi|241664234|ref|YP_002982594.1| prolyl-tRNA synthetase [Ralstonia pickettii 12D] gi|240866261|gb|ACS63922.1| prolyl-tRNA synthetase [Ralstonia pickettii 12D] Length = 574 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 119/233 (51%), Positives = 160/233 (68%), Gaps = 1/233 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + G+Y+++P+G + + V I+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGLYTYMPVGLRVIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q +LW E+GR+D G E+LR DR+++ + PT EEV+TDI R+ Sbjct: 61 MNAAGAVEVLMPVVQPGELWQETGRWDKMGDELLRFKDRHERDFVMQPTSEEVVTDIART 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE RPRFG+MR REF MKDAYSFD EG K SY KM+ + Sbjct: 121 EIRSYKQLPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDAEGLKLSYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y RIF R GL+ + A++G IGG SHEF V+ADTGE + D D+ Sbjct: 181 YTRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIADTGEDAIIYCPD-SDYAAN 232 Score = 166 bits (420), Expect = 8e-39, Method: Composition-based stats. Identities = 68/192 (35%), Positives = 106/192 (55%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P D+ N D P+ K RGIEVGH+F GT+YS M+ATF +GK + Sbjct: 382 PEPEVYDLRNVVAGDPSPDGKGTLAVCRGIEVGHVFMLGTRYSEAMNATFLDENGKTQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE ++D +GIIWP S+APF++ + + R+ ++++A Sbjct: 442 VMGCYGIGITRILGAAIEQNYDARGIIWPASIAPFQVVICPVGYDRSNAVREEADRLHAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD GE+ G+ FA +L+G P +V+VG + + + K+E + R ++ Sbjct: 502 LVAAGIDVMLDDRGERPGAMFADWELIGVPFRVVVGDRGLKEGKLEFQGRRDEAATAVAP 561 Query: 432 EEVINYASHRFS 443 +V+ R + Sbjct: 562 ADVLATLKARLA 573 >gi|172058202|ref|YP_001814662.1| threonyl-tRNA synthetase [Exiguobacterium sibiricum 255-15] gi|171990723|gb|ACB61645.1| threonyl-tRNA synthetase [Exiguobacterium sibiricum 255-15] Length = 646 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 80/443 (18%), Positives = 169/443 (38%), Gaps = 33/443 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L L E RD +L L +G+ WLP G V I +++ Sbjct: 233 KQHLHFLAEAKERDHRKLGKELDLF-FTSQDVGQGLPMWLPKGAAIRRTVERYIVDKELE 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P L S +L+ SG +D Y +M + +++ ++ P + I+++ + Sbjct: 292 LGYEHVYTPVLGSVELYKTSGHWDHYQDDMFPKMEMDNEELVLRPMNCPHHMMIYKNEPR 351 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR+LP ++ R E+ ++ +++ + + P+ K + + Sbjct: 352 SYRDLPLRVAELGGMHRYEMSGALTGLQRVRYMVLNDGHTFVRPDQMKEEFKAIVHLIQE 411 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSENTDFDDI 242 ++ G+ R D + + + + + D++ Sbjct: 412 VYADFGITDYKFRLS--------------YRDPADKEKYFDNDAIWEMAQRELKETMDEL 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L +++ +S ++ F ++ T+ Sbjct: 458 ELPYFEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERF----ELTY 506 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 KG DG+DH + G + + + + +P +AP ++ LI + + + Sbjct: 507 KGNDGQDHRPVVLHR--GVVSTMERFVAYLIEEYKGAFPTWLAPVQVKLIPVSSVHE--- 561 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D +I L K G V D E++G + A + P+ +++G K + +V I+ Sbjct: 562 DYAREIKTMLLKKGIRVETDFRDEKLGYRIREAQVNKVPVMLVLGDKEIEAREVNIRRYG 621 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + + SLE+ ++ +N Sbjct: 622 SKDSSNASLEQFVSDLEQEIANR 644 >gi|152976959|ref|YP_001376476.1| threonyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025711|gb|ABS23481.1| threonyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98] Length = 643 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 80/434 (18%), Positives = 168/434 (38%), Gaps = 32/434 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + +L+E RD +L L T + +G+ WLP G + I +++ G Sbjct: 235 MRMLEEAKERDHRKLGKELKLFTNN-QKVGQGLPLWLPKGATIRRIIERYIVDKEVSLGY 293 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L S +L+ SG ++ Y M +++ ++ P + ++++ I SYR Sbjct: 294 NHVYTPVLGSRELYETSGHWNHYRDGMFPSMQMDNEELVLRPMNCPHHMMVYKNDIHSYR 353 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ R E+ ++ + + + P+ K ++ L ++ Sbjct: 354 ELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYK 413 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIISL 245 GL++ R D +T+ + + D M D++ Sbjct: 414 DFGLENYSFRLS--------------YRDPEDTKKYYADDEMWEKAQGMLKEAMDEMGLE 459 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y DV ++ +L +++ +S ++ F ++ T+ G Sbjct: 460 YYEAEGEAAFYGPKLDV---QVRTALGKDETLSTVQLD----FLLPERF----ELTYVGE 508 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DGK H + G + + + + +P +AP ++ +I + QV D Sbjct: 509 DGKQHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVQVIPVSP--QVHLDYA 564 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +K+ L + G V D E+IG + A + P ++VG V+++ V ++ Sbjct: 565 KKVQEELQRAGIRVEVDTREEKIGYKIREAQMQKIPYMLVVGDNEVAENGVNVRKYGEQK 624 Query: 426 REDMSLEEVINYAS 439 E ++L+ ++ Sbjct: 625 SETIALDAFVDMIK 638 >gi|170726837|ref|YP_001760863.1| threonyl-tRNA synthetase [Shewanella woodyi ATCC 51908] gi|238688661|sp|B1KG61|SYT_SHEWM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|169812184|gb|ACA86768.1| threonyl-tRNA synthetase [Shewanella woodyi ATCC 51908] Length = 642 Score = 246 bits (628), Expect = 5e-63, Method: Composition-based stats. Identities = 73/439 (16%), Positives = 141/439 (32%), Gaps = 40/439 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + + + G+ W G + IR++ + Sbjct: 233 LNRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWSLFLELEKFIRQKLGQYTY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y + M + ++ P + IF +KSYR Sbjct: 291 QEVKGPLMMDRVLWERSGHWDKYSEAMFT-TNSENREYAIKPMNCPGHVQIFNQGLKSYR 349 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + + + Sbjct: 350 DLPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHVFC-TEDQVQQEVSACIKMVYDTY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G K I ++ + P D D + Sbjct: 409 ETFGFKDIVVKLSTRPEKR-----------------IGDDDMWDRAEEALKQALTANDIA 451 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I+ A Y + L D L + ++ G AT+ Sbjct: 452 YEILPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDYALPGRLG--------ATYVAE 500 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D + +G++ ++ + GK W + +++ D Sbjct: 501 DNSRQTPVMIHRAILGSLERFLGILIEEYAGKFPTWLAPMQAVVMNIT------DKQSDY 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ L + G D E+IG + L P ++VG + + + +V ++ R Sbjct: 555 VDEVVNILKENGIRASKDLRNEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRTRDGV 614 Query: 425 IREDMSLEEVINYASHRFS 443 + + E + + S Sbjct: 615 DLGKIQISEFASKIKEQIS 633 >gi|197286110|ref|YP_002151982.1| prolyl-tRNA synthetase [Proteus mirabilis HI4320] gi|227357229|ref|ZP_03841586.1| prolyl-tRNA synthetase [Proteus mirabilis ATCC 29906] gi|226701319|sp|B4F249|SYP_PROMH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|194683597|emb|CAR44486.1| prolyl-tRNA synthetase [Proteus mirabilis HI4320] gi|227162492|gb|EEI47481.1| prolyl-tRNA synthetase [Proteus mirabilis ATCC 29906] Length = 571 Score = 246 bits (628), Expect = 5e-63, Method: Composition-based stats. Identities = 144/430 (33%), Positives = 206/430 (47%), Gaps = 41/430 (9%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAEI SH+LMLR GMI + + G+Y W+P G + L + I+REE Sbjct: 1 MRTSHYLLSTLKETPADAEIVSHQLMLRAGMIRKLASGLYDWMPTGVRVLRKIEKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G++E+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TDI R+ Sbjct: 61 MDNAGSLEISMPVVQPADLWQESGRWEQYGPELLRFTDRGERPFVLGPTHEEVVTDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF ++ E + +Y++M+ + Sbjct: 121 EITSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHISQESLQETYDRMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y IF R+GL P+ A++G IGG SHEF VLAD+GE + D+ E Sbjct: 181 YSNIFTRIGLDFRPVLADTGSIGGSASHEFQVLADSGEDDIVF-STASDYAANIELAEAV 239 Query: 236 --------------NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARG 281 D + ++ +VEQ+ P T + Sbjct: 240 MPATPRSPATEELRLVDTPNAKTIAELVEQFNLPIEKTVKTLIVHATEESGHKLVALLVR 299 Query: 282 IEVGHIFYFGTKYSLP-MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 + K S+ F + V G +G + + +I + Sbjct: 300 GDHELNEIKAEKCSIVASPLVFATEEEIRQAVNAGPGSLGPINLPLPIIIDRAVSVMSDF 359 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYA-------------RLSKVGCDV--FWDDMG 385 I + I L K G +V + Sbjct: 360 GAGANIDGKHYFGINWERDLPLAEMADIRNVVEGDPSPDGKGTLLIKRGIEVGHIF---- 415 Query: 386 EQIGSQFAVA 395 Q+G +++ A Sbjct: 416 -QLGKKYSEA 424 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 71/191 (37%), Positives = 113/191 (59%), Gaps = 3/191 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N D P+ K + RGIEVGHIF G KYS + AT + +G + V Sbjct: 380 PLAEMADIRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGKKYSEALKATVQNEEGHNQVV 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG R+VAA IE +HD +GIIWPD++APF+++++ + H ++ EK+YA Sbjct: 440 TMGCYGIGITRIVAAAIEQNHDARGIIWPDAIAPFQVAILPMNMHRSYRVKEVAEKLYAD 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV +DD E+ G FA +L+G P +++G + + + +VE K R + + +++ Sbjct: 500 LRAQGIDVLFDDRKERPGVMFADMELIGVPHTIVIGDRNLDNEQVEYKARRSDDKSLVNV 559 Query: 432 EEVINYASHRF 442 +V+ + + Sbjct: 560 NDVVAFIKEQL 570 >gi|187930129|ref|YP_001900616.1| prolyl-tRNA synthetase [Ralstonia pickettii 12J] gi|226701322|sp|B2UCU9|SYP_RALPJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|187727019|gb|ACD28184.1| prolyl-tRNA synthetase [Ralstonia pickettii 12J] Length = 574 Score = 246 bits (628), Expect = 5e-63, Method: Composition-based stats. Identities = 119/233 (51%), Positives = 160/233 (68%), Gaps = 1/233 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + G+Y+++P+G + + V I+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGLYTYMPVGLRVIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q +LW E+GR+D G E+LR DR+++ + PT EEV+TDI R+ Sbjct: 61 MNAAGAVEVLMPVVQPGELWQETGRWDKMGDELLRFKDRHERDFVMQPTSEEVVTDIART 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE RPRFG+MR REF MKDAYSFD EG K SY KM+ + Sbjct: 121 EIRSYKQLPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDAEGLKVSYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y RIF R GL+ + A++G IGG SHEF V+ADTGE + D D+ Sbjct: 181 YTRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIADTGEDAIIYCPD-SDYAAN 232 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 68/192 (35%), Positives = 107/192 (55%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P D+ N D+ P+ K RGIEVGH+F GT+YS M+ATF +GK + Sbjct: 382 PEPEVYDLRNVVAGDASPDGKGTLAICRGIEVGHVFMLGTRYSEAMNATFLDENGKTQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE ++D +GIIWP S+APF++ + + R+ ++++A Sbjct: 442 VMGCYGIGITRILGAAIEQNYDARGIIWPASIAPFQVVICPVGYDRSDAVREEADRLHAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD GE+ G+ FA +L+G P +V+VG + + + K+E + R ++ Sbjct: 502 LVAAGIDVMLDDRGERPGAMFADWELIGVPFRVVVGDRGLKEGKLEFQGRRDEAATAVAP 561 Query: 432 EEVINYASHRFS 443 +V+ R + Sbjct: 562 ADVLATLKARLA 573 >gi|91078076|ref|XP_971952.1| PREDICTED: similar to prolyl-tRNA synthetase [Tribolium castaneum] Length = 448 Score = 246 bits (628), Expect = 5e-63, Method: Composition-based stats. Identities = 153/458 (33%), Positives = 237/458 (51%), Gaps = 50/458 (10%) Query: 2 RRSKYFLPIL-----QENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNA 55 R S+ F P+ E R D S +LML G+I Q S G + +LPLG K+L+ + Sbjct: 8 RLSRLFQPVSVVPKNAEVKRHDITSKSQRLMLELGIIRQASPGCFHFLPLGVKSLEKLTR 67 Query: 56 IIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMT 115 ++ EE + G ++ PTL +A LW ++GR ++ E+ ++ DR+D++ I PTHEE + Sbjct: 68 LVDEEMKKIGGQKIIFPTLTNAKLWEKTGRLETVSSELFQIKDRHDQSYILSPTHEEAAS 127 Query: 116 DIFRSH-IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSY 174 ++ S SY++LP YQI K+RDE++PRFG+MR ++FLMKD YSFD E +KH+Y Sbjct: 128 NLLASLAPISYKHLPLKLYQITSKYRDEMKPRFGLMRGKQFLMKDMYSFDTDLETAKHTY 187 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS 234 +++ SY RIF R+G+ + + SG +GG+LSHE+ AD GE ++ Sbjct: 188 DEICKSYDRIFRRIGIDFVKVVGCSGHMGGELSHEYHYKADVGEDKILTCNKCN------ 241 Query: 235 ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY 294 Y+A ++V E+ + GIEVGH F G KY Sbjct: 242 ---------------------YSANTEVSGEEKCPNCGNTSVKIHLGIEVGHTFLLGEKY 280 Query: 295 SLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 S P++ATF GK +QMGSYG+G R++AAVIE + I WP ++P+ + ++ Sbjct: 281 SKPLNATFLNNHGKPDVLQMGSYGLGLSRILAAVIEVMSSEQEIRWPQILSPYSVIILPP 340 Query: 355 K--AHDQVCRD---ACEKIYAR------LSKVGCDVFWDDM-GEQIGSQFAVADLLGFPL 402 K + ++ + +Y + L V DD IG +F A G+P Sbjct: 341 KSGSKEETHIKDSGLVDSLYEKIETTCNLQDN---VLIDDRTNFTIGRRFLEAKKNGYPF 397 Query: 403 QVIVGSKFVSDSKV-EIKHRLTGIREDMSLEEVINYAS 439 V +G K V + + EI + T +S +++NY Sbjct: 398 IVTLGKKIVENPLLYEITNLKTNETLFLSENDLMNYLR 435 >gi|149927159|ref|ZP_01915416.1| prolyl-tRNA synthetase [Limnobacter sp. MED105] gi|149824098|gb|EDM83319.1| prolyl-tRNA synthetase [Limnobacter sp. MED105] Length = 586 Score = 246 bits (628), Expect = 5e-63, Method: Composition-based stats. Identities = 123/235 (52%), Positives = 169/235 (71%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +++FL L+E P DAE+ SH+LM+R GMI + + GIY+++P+G +++ V I+REE Sbjct: 1 MRATQFFLNTLKEAPADAEVISHQLMMRAGMIKRLAGGIYTYMPVGLRSIRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW ESGR++ YG E+LR+ DR+D+ + GPTHEEV+TD+ R Sbjct: 61 MNRAGALELLMPAVQPAELWQESGRWEKYGPELLRMKDRHDRDYVIGPTHEEVITDVVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE+RPRFGVMR REF+MKDAYSFD T E + +Y+ M+ + Sbjct: 121 EVKSYRQLPLNLYQIQTKFRDEIRPRFGVMRGREFVMKDAYSFDRTQEAALKTYDVMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL + A++G IGG+ SHEF V+ADTGE + D+ E Sbjct: 181 YRRIFTRLGLNFRAVNADTGSIGGNRSHEFHVIADTGEDAIAYC-PSSDYAANVE 234 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 105/196 (53%), Gaps = 4/196 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P SD+ N D P+ K V RGIEVGH+FY GTKYS + A F +GK + Sbjct: 388 PEPEVSDIRNVVEGDPSPDGKGVLAMCRGIEVGHVFYLGTKYSEALQAKFLEENGKPAVI 447 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 +MG YGIG R++ A IE + D +GIIWP S+APF++ L I + +K+Y Sbjct: 448 EMGCYGIGVTRILGAAIEQNFDDRGIIWPLSIAPFEVVLCPIGYKKSDEVKAQADKLYQM 507 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG-IREDMS 430 L G DV DD E+ G FA +L+G PL+V +G + + + KVE + R + D+ Sbjct: 508 LKDAGVDVMLDDRDERPGVMFADWELIGVPLRVTLGDRGLKEGKVEFQSRDGKVEKRDVE 567 Query: 431 LEEVINYASHRFSNNR 446 + E+ ++ + Sbjct: 568 VGEIFEQLCVELASRQ 583 >gi|299537247|ref|ZP_07050550.1| threonyl-tRNA synthetase [Lysinibacillus fusiformis ZC1] gi|298727488|gb|EFI68060.1| threonyl-tRNA synthetase [Lysinibacillus fusiformis ZC1] Length = 638 Score = 246 bits (628), Expect = 5e-63, Method: Composition-based stats. Identities = 72/442 (16%), Positives = 150/442 (33%), Gaps = 43/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 F+ + + R+ +L L M + + G+ +L GQ + + + +R Q + Sbjct: 234 FIFLEEAEKRNHRKLGKELSLF--MFSEEAPGMPFYLANGQILRNELESYLRHLQAKYDY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + + LW +SG +D Y M +D++ P + IF++ + SYR Sbjct: 292 GEVRTPLMMNQRLWEQSGHWDHYKDNM-YFTQVDDQSFALKPMNCPGHMLIFKNALHSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R E G++R R F DA+ F TP+ + ++ Sbjct: 351 DLPIRMAEFGQVHRHEFSGALNGLLRVRTFCQDDAHIF-ATPQQIEDEIALALKIIDEVY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + G + P D + +++ Sbjct: 410 NVFGFAYTI-ELSTRP-----------------DDYMGDLALWDQAEAALENVLNNLGIA 451 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 +I A Y D+H + D++ + + + ++ F K+ T+ Sbjct: 452 YTINAGDGAFYGPKIDIH---IKDAIQRSHQCATVQLD----FQLPEKFD----LTYINE 500 Query: 306 DGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + R + +IE + + Sbjct: 501 HNERVRPVVIHRAVFGSIDRFLGILIEHFGGAFPTWLAPQQVQVIGVA-------EAHQG 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ L + V DD E++G + A L P V++G + V++ V ++ Sbjct: 554 YAKQVVEALQQAEIRVQLDDRQEKLGKKIREAQLQKIPYIVVIGDREVANQTVAVRRHGQ 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 D SL+++I + Sbjct: 614 QNANDKSLQQLIEEVTAAIQQK 635 >gi|45387545|ref|NP_991118.1| probable prolyl-tRNA synthetase, mitochondrial [Danio rerio] gi|41350986|gb|AAH65673.1| Prolyl-tRNA synthetase (mitochondrial) [Danio rerio] Length = 477 Score = 246 bits (628), Expect = 5e-63, Method: Composition-based stats. Identities = 148/448 (33%), Positives = 228/448 (50%), Gaps = 37/448 (8%) Query: 4 SKYFLPI-LQE--NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 S+ F P L+E + D S +LM++TG+IH + G + +LP+ ++L+ + +I EE Sbjct: 50 SRLFQPSNLREGQDGGDLTCRSQRLMVQTGLIHPSNPGCFYYLPVALRSLEKLVRLIDEE 109 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMT-DIFR 119 + G ++ +P L SA+LW +SGR++ GKEM RL DR++ GPTHEE +T Sbjct: 110 MHAIGGQKVDMPALCSAELWKKSGRWELMGKEMFRLLDRHNGEYCLGPTHEEAVTELFAS 169 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 SY+ LP YQ+ KFRDE +P+FG++R REF MKD YSFD+ E + H+YN + Sbjct: 170 QTTMSYKKLPLLLYQVTRKFRDEQKPKFGLLRGREFYMKDMYSFDINEEAALHTYNSVCQ 229 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 +Y RI RL LK + ++A++G IGG LSHEF + AD GE ++ + Sbjct: 230 AYRRILDRLHLKWVQVQADTGNIGGTLSHEFQLPADIGEDKLLVCGNC------------ 277 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++A + + K +RGIEVGH FY GTKYS Sbjct: 278 -----------GFSANI--ETMEPGQAKCSQCQTGKLTESRGIEVGHTFYLGTKYSQAFK 324 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA--H 357 A F A +MG +G+G R++AA IE I WP +AP+++ ++ K Sbjct: 325 ALFVNASNVPAVAEMGCFGLGVTRILAASIEVMSTEDAIHWPGLIAPYQVCVLPPKKGSK 384 Query: 358 DQVCRDACEKIYARLSKV--GCD--VFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVS 412 E++ L V DD + IG + A +LG+P V+VG + Sbjct: 385 AHEATQKAEELAQSLGNSLPNLRGEVVLDDRTQMTIGKRLKDAKILGYPFVVVVGQTALD 444 Query: 413 D-SKVEIKHRLTGIREDMSLEEVINYAS 439 D + E+ + +G +S + +++ S Sbjct: 445 DLASFEVVCQQSGETLFLSKDGLVDLLS 472 >gi|291613215|ref|YP_003523372.1| prolyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1] gi|291583327|gb|ADE10985.1| prolyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1] Length = 566 Score = 246 bits (628), Expect = 5e-63, Method: Composition-based stats. Identities = 122/235 (51%), Positives = 168/235 (71%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ L+E P +AE+ SH+LMLR G I + S G+Y+W+PLG + L V A++REE Sbjct: 1 MRVSQFFISTLKEAPSEAELPSHRLMLRAGYIRKLSSGLYTWMPLGLRVLRKVEAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++G IE+ +P +Q A+LW E+GR+D +G +ML++ DR+D +GPTHEEV+TDI R Sbjct: 61 MNKSGGIELLMPAVQPAELWQETGRWDVFGPQMLKIKDRHDNLFCFGPTHEEVITDIARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + E + +Y M+ + Sbjct: 121 EVKSYRQLPLNFYQIQTKFRDEVRPRFGVMRAREFVMKDAYSFHSSFESLEQTYRVMYET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL+ + A++G IGG SHEF VLAD+GE + + D+ E Sbjct: 181 YTRIFTRLGLQFRAVAADTGAIGGSGSHEFHVLADSGEDALAFCPN-SDYAANVE 234 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 105/189 (55%), Gaps = 3/189 (1%) Query: 257 AATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 + D+ N D+ P+ K RGIEVGHIF TKYS + AT+ +GK ++M Sbjct: 378 SNVHDLRNVVAGDASPDGKGALELCRGIEVGHIFQLRTKYSEALQATYLDENGKAQVMEM 437 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLS 373 G YGIG R+VAA IE + D +GI P +APF++++ I + R+A E++YA L+ Sbjct: 438 GCYGIGVSRIVAAAIEQNFDERGIALPSGMAPFQVAIAPIGIKKSEAVRNAAEQLYAELT 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G +V DD E+ G FA +L+G P ++++G + + + KVE + R + + L++ Sbjct: 498 AAGVEVLLDDRDERPGVMFADLELIGVPHRIVIGDRGLKEGKVEYQGRKDETAQSIPLQD 557 Query: 434 VINYASHRF 442 + + Sbjct: 558 AVKLVQSKL 566 >gi|313205743|ref|YP_004044920.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Riemerella anatipestifer DSM 15868] gi|312445059|gb|ADQ81414.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Riemerella anatipestifer DSM 15868] gi|315022861|gb|EFT35885.1| threonyl-tRNA synthetase [Riemerella anatipestifer RA-YM] Length = 641 Score = 246 bits (628), Expect = 5e-63, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 157/441 (35%), Gaps = 39/441 (8%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E R D +L L T + G+ WLP G + + + E Q + G Sbjct: 229 YLERLEEAKRRDHRKLGKELGLFT-FSEKVGAGLPLWLPKGAALRKKLESFLSEAQRKGG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIK 123 + P + + +L+ SG Y+ YG + + + + P + +++++ Sbjct: 288 YEFVMTPHIGNIELYKTSGHYEKYGADSFQPIKTPHVGEEFLLKPMNCPHHCEVYKAQQW 347 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP + + +R E G+ R R F DA+ F TP+ + K+ L Sbjct: 348 SYKDLPKRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFC-TPDQLLEEFEKVIDLVL 406 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +F LG + + D + + S Sbjct: 407 YVFKSLGFEDFIAQVSLR--------------DKENRAKYIGSEENWEKAESAIITAAKN 452 Query: 243 ISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 LN++VE A Y D + D+L + ++ ++ T Sbjct: 453 KGLNTVVEYGEAAFYGPKLDFM---VKDALGRSWQLGTIQVDYNLP--------ERFDLT 501 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G+D + H + G+M A++ + G +W + + Sbjct: 502 YVGSDNERHRPIMIHRAPFGSMERFIAILIENTAGDFPLW------LNPDQYILLPISEK 555 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ L D+ E+ G + A++ P +IVG + V ++ Sbjct: 556 YTDYAKKVSQLLENHDICGLVDERNEKTGKKIRDAEMKKIPFMLIVGENEAGNQTVSVRK 615 Query: 421 RLTGIREDMSLEEVINYASHR 441 R G +MS+E + Y + Sbjct: 616 RGEGDLGEMSIESFVEYFKNE 636 >gi|308048689|ref|YP_003912255.1| prolyl-tRNA synthetase [Ferrimonas balearica DSM 9799] gi|307630879|gb|ADN75181.1| prolyl-tRNA synthetase [Ferrimonas balearica DSM 9799] Length = 570 Score = 246 bits (628), Expect = 5e-63, Method: Composition-based stats. Identities = 123/237 (51%), Positives = 158/237 (66%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ + ++E P DAEI SH+LM+R GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQTLISTMKETPSDAEIVSHQLMMRAGMIRKLAAGLYTWLPSGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E +P +Q ADLW E+GR+D G EM RL DR+D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNRAGAVETLMPVVQPADLWQETGRWDDMGAEMARLKDRHDRDFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE RPRFGVMR+REFLMKDAYSF L E +Y M+ + Sbjct: 121 EIKSYKQLPINLYQIQTKFRDERRPRFGVMRAREFLMKDAYSFHLDQETMDETYQAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RI R+GL P+ A++G IGG SHEF VLA +GE + D+ E Sbjct: 181 YCRILERMGLAYRPVLADTGAIGGSHSHEFQVLAQSGEDAIAY-STESDYAANIEKA 236 Score = 181 bits (460), Expect = 2e-43, Method: Composition-based stats. Identities = 72/206 (34%), Positives = 115/206 (55%), Gaps = 3/206 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFD--SLPENKRVSARGIEVGHIFYFGTKYSLPM 298 D I + +D+ N D ARGIEVGHIF GTKYS M Sbjct: 365 DGKHYFGINWERDVALPEVADLRNVVEGDLSPCGNGTLKIARGIEVGHIFQLGTKYSESM 424 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 +AT +GK + MG YG+G R+VAA IE +HD +GIIWPD++AP++++++ + Sbjct: 425 NATVLDPNGKATPLIMGCYGVGVSRIVAAAIEQNHDDRGIIWPDAIAPYQVAILPMNMHK 484 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + EK+YA L+ G +V +DD E+ G FA +L+G P +++G + + D VE Sbjct: 485 SHRVAELAEKLYAELTAAGIEVLFDDRKERPGVMFADHELIGIPHTIVIGDRGIDDGNVE 544 Query: 418 IKHRLTGIREDMSLEEVINYASHRFS 443 K R TG + ++++++V+ + +F+ Sbjct: 545 YKVRKTGEKSELAIDQVVEFFKGKFA 570 >gi|257875532|ref|ZP_05655185.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC20] gi|257809698|gb|EEV38518.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC20] Length = 646 Score = 246 bits (628), Expect = 5e-63, Method: Composition-based stats. Identities = 76/441 (17%), Positives = 162/441 (36%), Gaps = 30/441 (6%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 F+ + +E RD +L L + + G+ WLP G + I +++ G Sbjct: 231 FIRLREEAKERDHRKLGKELELFM-LSPEVGAGLPFWLPKGATIRRTIERYIVDKEISLG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKS 124 + P + + DL+ SG +D Y ++M D D M + P + ++++ I S Sbjct: 290 YQHVYTPIMANVDLYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIHS 349 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR LP ++ + R E ++ + + + P+ K + + + + Sbjct: 350 YRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKEEFKRTLDLMIGV 409 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + R + + F + D++ Sbjct: 410 YEDFNITDYRFRLS-------------YRDPQNKDKYFDDDAMWENAQTMLKAAMDELEL 456 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ +L + +S ++ F ++ T+ G Sbjct: 457 DYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTYVG 505 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG++++ + + G + + + + +P +AP + S+I + + D Sbjct: 506 EDGENNHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQASIIPVSV--EAHSDY 562 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +I RL G V DD E++G + + P Q++VG + V+D+ V I+ + Sbjct: 563 AYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKIPYQIVVGDQEVNDATVNIRRYGSK 622 Query: 425 IREDMSLEEVINYASHRFSNN 445 + L ++ + N Sbjct: 623 ETQVEELNLFVDAMAAEVKNY 643 >gi|39996560|ref|NP_952511.1| prolyl-tRNA synthetase [Geobacter sulfurreducens PCA] gi|81832056|sp|Q74D59|SYP_GEOSL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|39983441|gb|AAR34834.1| prolyl-tRNA synthetase [Geobacter sulfurreducens PCA] gi|298505576|gb|ADI84299.1| prolyl-tRNA synthetase [Geobacter sulfurreducens KN400] Length = 570 Score = 246 bits (628), Expect = 5e-63, Method: Composition-based stats. Identities = 127/237 (53%), Positives = 167/237 (70%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + YF+P L+E P DAE+ SH+LMLR GMI + + GIY++LPLG +++ V I+REE Sbjct: 1 MRYTNYFIPTLKETPSDAEVVSHQLMLRAGMIRKLAAGIYNYLPLGLRSIRKVETIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GAIE+ +P++Q A+LW ES R++ YGKE+LR DR D GPTHEEV+TDI R Sbjct: 61 MDRAGAIELLMPSVQPAELWQESTRWEQYGKELLRFKDRKDAEFCLGPTHEEVVTDIVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR +PF YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ S SY+KM+ + Sbjct: 121 EVKSYRQMPFNLYQIQAKFRDEIRPRFGLMRGREFIMKDAYSFDVDSSASDLSYDKMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R GLK + A++G IGG SHEF+VLAD+GE + ++ E Sbjct: 181 YRRIFQRCGLKFRAVEADTGSIGGSSSHEFMVLADSGEDAIVSCTQC-EYAANVEKA 236 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 77/188 (40%), Positives = 106/188 (56%), Gaps = 3/188 (1%) Query: 260 SDVHNEKLFDSLPENK---RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P + RGIEVGH+F GTKYS + AT+ ADGK+ + MG Sbjct: 379 ADIRNVVHGDPCPRCEAGHLELWRGIEVGHVFKLGTKYSEALRATYLDADGKEQIIFMGC 438 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R VAA IE +HD GII+P +APF + + D ACE +Y L G Sbjct: 439 YGIGISRTVAACIEQNHDADGIIFPIPIAPFHCIVSAVNTKDAEVMAACESLYLDLRAAG 498 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V +DD E+ G +F ADL+G PL+++VGSK ++D KVE+K R TG E + L + Sbjct: 499 VEVLFDDRDERPGIKFKDADLIGIPLRLVVGSKNLADGKVELKSRRTGEVELLPLAGAVE 558 Query: 437 YASHRFSN 444 + + Sbjct: 559 KVRNIVAE 566 >gi|332678497|gb|AEE87626.1| Threonyl-tRNA synthetase [Francisella cf. novicida Fx1] Length = 634 Score = 246 bits (628), Expect = 5e-63, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 144/442 (32%), Gaps = 41/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD L L + S GI W G + V +R N+ G Sbjct: 230 YLNMLEEAEKRDHRKIGKVLDLF--HFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG Y + M ++ P + ++ + + SY Sbjct: 288 CSEIRTPLIADFSLWQKSGHASKYAENMF-ATKSENRDFAIRPMNCPTCVQVYNTKLHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F + + + + Sbjct: 347 RDLPIRMAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEV- 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++ P E D D Sbjct: 406 YKDFGFNDFAVKIALRPENRIGDDE-----------------TWDKSEQMLKNALDANNV 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ A Y + H L D++ + + ++ G AT+ Sbjct: 449 SYELLPGEGAFYGPKIEFH---LKDAIGRSWQCGTIQLDFSMPQRLG--------ATYID 497 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G+ V + +G++ ++ + G +W V + + N D Sbjct: 498 KNGEKQVPVMLHRAIVGSLERFIGMLIEHYAGNLPLWLAPVQVAVMGISN------NQDD 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C++++ L K G D E+IG + LL P VI+G + I+ Sbjct: 552 YCKEVFTMLEKNGIRAKLDLRNEKIGFKIREHTLLRVPYLVILGKNEQEQKIITIRKHSG 611 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS+++ + + Sbjct: 612 EDLGQMSVDDFCAFLDKQIQAK 633 >gi|78189671|ref|YP_380009.1| threonyl-tRNA synthetase [Chlorobium chlorochromatii CaD3] gi|123729828|sp|Q3APV9|SYT_CHLCH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|78171870|gb|ABB28966.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Chlorobium chlorochromatii CaD3] Length = 657 Score = 246 bits (628), Expect = 5e-63, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 152/445 (34%), Gaps = 39/445 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 I + RD +L L + + G+ WLP G + + +REEQ + G + Sbjct: 245 RIEEAKRRDHRKLGAELELFL-LSPEVGSGLPMWLPKGAIIRSELESFLREEQRKRGYVP 303 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-----MIYGPTHEEVMTDIFRSHIK 123 + P + + +L+ SG Y Y +D+ + P + I+ S ++ Sbjct: 304 VYTPHIGNIELYKRSGHYPYYSDSQFPPLTYHDEDGKQEQYLLKPMNCPHHHLIYSSKMR 363 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP F + +R E G+ R+R F D++ + + Sbjct: 364 SYRDLPLRFTEFGTVYRHEQSGELNGLARARGFTQDDSHIYCRPDQLVDE-ICSAIELTQ 422 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSENTDFDD 241 +F LG + R D + + + + + Sbjct: 423 FVFKTLGFAEVQTRLSLH--------------DPANQAKYGGTAEVWEQAEKDVQEAAER 468 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + I + Y D + D++ ++ ++ T Sbjct: 469 MGVDYFIGIGEASFYGPKIDFI---VRDAIGRKWQLGTVQVDYVMP--------ERFDLT 517 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + G+DG+ H + + H +P +AP +++++ I + Sbjct: 518 YVGSDGQKHRPVVIHRAPFGSMERFIGLLIEHT--AGNFPLWLAPVQVAVLPIA---EEN 572 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D +Y RL G D E+I + A++ P +++G K ++ +V ++ Sbjct: 573 HDYATTVYRRLLAAGIRAELDTRSEKINRKIRDAEMSKTPCMLVIGQKEQANGEVSLRRH 632 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 G + +E+I +N + Sbjct: 633 RQGDAGRFATDELIETLKQEIANRQ 657 >gi|309783049|ref|ZP_07677768.1| proline--tRNA ligase [Ralstonia sp. 5_7_47FAA] gi|308918157|gb|EFP63835.1| proline--tRNA ligase [Ralstonia sp. 5_7_47FAA] Length = 574 Score = 246 bits (628), Expect = 5e-63, Method: Composition-based stats. Identities = 119/233 (51%), Positives = 160/233 (68%), Gaps = 1/233 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + G+Y+++P+G + + V I+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGLYTYMPVGLRVIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q +LW E+GR+D G E+LR DR+++ + PT EEV+TDI R+ Sbjct: 61 MNAAGAVEVLMPVVQPGELWQETGRWDKMGDELLRFKDRHERDFVMQPTSEEVVTDIART 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE RPRFG+MR REF MKDAYSFD EG K SY KM+ + Sbjct: 121 EIRSYKQLPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDAEGLKVSYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y RIF R GL+ + A++G IGG SHEF V+ADTGE + D D+ Sbjct: 181 YTRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIADTGEDAIIYCPD-SDYAAN 232 Score = 166 bits (420), Expect = 7e-39, Method: Composition-based stats. Identities = 68/192 (35%), Positives = 106/192 (55%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P D+ N D P+ K RGIEVGH+F GT+YS M+ATF +GK + Sbjct: 382 PEPEVYDLRNVVAGDPSPDGKGTLAVCRGIEVGHVFMLGTRYSEAMNATFLDENGKTQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE ++D +GIIWP S+APF++ + + R+ ++++A Sbjct: 442 VMGCYGIGITRILGAAIEQNYDARGIIWPASIAPFQVVICPVGYDRSDAVREEADRLHAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD GE+ G+ FA +L+G P +V+VG + + + K+E + R ++ Sbjct: 502 LVAAGIDVMLDDRGERPGAMFADWELIGVPFRVVVGDRGLKEGKLEFQGRRDEAATAVAP 561 Query: 432 EEVINYASHRFS 443 +V+ R + Sbjct: 562 ADVLATLKARLA 573 >gi|77918296|ref|YP_356111.1| prolyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380] gi|114152225|sp|Q3A6R6|SYP_PELCD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|77544379|gb|ABA87941.1| prolyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380] Length = 571 Score = 246 bits (628), Expect = 5e-63, Method: Composition-based stats. Identities = 121/237 (51%), Positives = 164/237 (69%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + Y LP L+E P DAE+ SHKLMLR GMI + + GIY++LP G +++ V I+REE Sbjct: 1 MRYTDYLLPTLKETPSDAEVISHKLMLRAGMIRKLAAGIYNYLPFGLRSIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P + ++LW ESGR++ YGKE+LR DR D + GPTHEEV+TD+ R+ Sbjct: 61 MDRAGAMELLMPMVVPSELWEESGRWEHYGKELLRFTDRKDASFCLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ G+ +Y KM+ + Sbjct: 121 TVRSYRQLPLNLYQIQGKFRDEIRPRFGLMRGREFIMKDAYSFDIDEAGADVAYEKMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R GLK + A++G IGG SHEF+VLA +GE + ++ E Sbjct: 181 YRRIFERCGLKFRAVEADTGNIGGSSSHEFMVLAASGEDAIVSCGQC-EYAANIEKA 236 Score = 173 bits (437), Expect = 8e-41, Method: Composition-based stats. Identities = 69/183 (37%), Positives = 100/183 (54%), Gaps = 2/183 (1%) Query: 260 SDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ + D P V RGIEVGH+F GTKYS + AT G+D + MG Y Sbjct: 381 ADLRAAEAGDICPRCGGVLEIWRGIEVGHVFKLGTKYSAALGATVLDDQGQDRELFMGCY 440 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R VAA IE +HD GI++P +APF + + + + A E +YA L +G Sbjct: 441 GIGVGRTVAAAIEQNHDENGIVFPMPIAPFHVLVTVVNPRQEEVLAAAENLYAELQALGV 500 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V DD E+ GS+F ADL+G PL++ VG++ + ++ VE++ R G R + L E Sbjct: 501 EVLLDDRDERPGSKFKDADLIGIPLRLTVGARGLKENAVELQERAGGERRMLPLAEAAAL 560 Query: 438 ASH 440 Sbjct: 561 VRD 563 >gi|118497781|ref|YP_898831.1| threonyl-tRNA synthetase [Francisella tularensis subsp. novicida U112] gi|194323753|ref|ZP_03057529.1| threonyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE] gi|208779844|ref|ZP_03247188.1| threonyl-tRNA synthetase [Francisella novicida FTG] gi|166223342|sp|A0Q762|SYT_FRATN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|118423687|gb|ABK90077.1| threonyl-tRNA synthetase [Francisella novicida U112] gi|194322117|gb|EDX19599.1| threonyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE] gi|208744299|gb|EDZ90599.1| threonyl-tRNA synthetase [Francisella novicida FTG] Length = 634 Score = 246 bits (628), Expect = 5e-63, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 144/442 (32%), Gaps = 41/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD L L + S GI W G + V +R N+ G Sbjct: 230 YLNMLEEAEKRDHRKIGKVLDLF--HFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG Y + M ++ P + ++ + + SY Sbjct: 288 CSEIRTPLIADFSLWQKSGHASKYAENMF-ATKSENRDFAIRPMNCPTCVQVYNTKLHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F + + + + Sbjct: 347 RDLPIRMAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEV- 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++ P E D D Sbjct: 406 YKDFGFNDFAVKIALRPENRIGDDE-----------------TWDKSEQMLKNALDANNV 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ A Y + H L D++ + + ++ G AT+ Sbjct: 449 SYELLPGEGAFYGPKIEFH---LKDAIGRSWQCGTIQLDFSMPQRLG--------ATYID 497 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G+ V + +G++ ++ + G +W V + + N D Sbjct: 498 KNGEKQVPVMLHRAIVGSLERFIGMLIEHYAGNLPLWLAPVQVAVMGISN------NQDD 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C++++ L K G D E+IG + LL P VI+G + I+ Sbjct: 552 YCKEVFTMLEKNGIRAKLDLRNEKIGFKIREHTLLRVPYLVILGKNEQEQKIITIRKHSG 611 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS+++ + + Sbjct: 612 EDLGQMSVDDFCAFLDKQIQAK 633 >gi|325972697|ref|YP_004248888.1| threonyl-tRNA synthetase [Spirochaeta sp. Buddy] gi|324027935|gb|ADY14694.1| threonyl-tRNA synthetase [Spirochaeta sp. Buddy] Length = 581 Score = 246 bits (628), Expect = 6e-63, Method: Composition-based stats. Identities = 74/448 (16%), Positives = 137/448 (30%), Gaps = 41/448 (9%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L L++ RD +L L + + G+ W P+G + ++ R E Sbjct: 171 RLYLQHLEDVEKRDHRKLGKELDLFSLH-EEAGPGLVYWHPMGARIRQSIENFWRSEHYA 229 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + LW SG D Y M + + P + I+++ Sbjct: 230 NGYEMVYTPHIGRSWLWETSGHLDFYKDGMYPPMEMDKSDYYVKPMNCPFHIMIYKNSKH 289 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + ++ +R E G+MR R F DA+ F + + Sbjct: 290 SYRDLPCRWAELGTVYRYEKAGAMHGLMRVRGFTQDDAHLFVTPDQMNDEILE------- 342 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +R + E T + + Sbjct: 343 -----------VLRFSLHMLHSFGFTEINAYLSTKPEKSVGDPARWAAATEALRQAIVAE 391 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I E A Y D+ K+ D++ ++S + TF Sbjct: 392 GLSYEIDEGGGAFYGPKIDL---KIKDAIGREWQLSTVQFDFNEP--------ERFDMTF 440 Query: 303 KGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 DG + M + R +IE + Sbjct: 441 VDKDGVEKRPYMIHRALLGSIERFFGVLIEHYAGAFPPWLSPEQIKLIPVG-------EN 493 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D + + RL K G V D +++ ++ A L P VI+G + + +V ++ Sbjct: 494 FFDYAKDLEKRLRKEGFRVSADLGDDRMNAKIRNAQQLKIPYMVIIGEREAQNDQVSVRL 553 Query: 421 RLTGIREDMSLEEVINYASHRFSNNRPV 448 R +S + I + + + Sbjct: 554 RTGKQENGLSTQAFIEMVKQKVESKEQL 581 >gi|313902061|ref|ZP_07835474.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965] gi|313467670|gb|EFR63171.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965] Length = 638 Score = 246 bits (628), Expect = 6e-63, Method: Composition-based stats. Identities = 78/442 (17%), Positives = 155/442 (35%), Gaps = 41/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + + G W P G + RE Q R G Sbjct: 232 LQRLEEARRRDHRKLGPELDLF--HFEEVAPGYAFWHPKGATVYGLLEQFSRELQARYGY 289 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + DLW SG ++ Y M L +R D P + ++RS I+SYR Sbjct: 290 QEVRTPEILKVDLWHRSGHWEHYRDNMF-LIEREDALFGVKPMNCPGHCLLYRSRIRSYR 348 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R E G++R R F DA+ + + + ++ I+ Sbjct: 349 DLPLRLAEYGRLARFERSGTLHGLLRVRGFEQDDAH-LFVREDQIEEEIGRVLELVDTIY 407 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G+ A T + + + + Sbjct: 408 GTFGMPYEIKLA------------------TRPEKFMGDPALWERAEAALARALEAAGRD 449 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 ++ A Y D + + DSL + + ++ F ++ T+ A Sbjct: 450 YTLAPGDGAFYGPKLDFY---VIDSLGRKWQTATVQLD----FQMPIRFD----LTYVDA 498 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 G++ + +G++ ++ + +P +AP ++ ++ + D Sbjct: 499 AGQEQRPVMIHRAIMGSLERFIGILI---EHYAGAFPVWLAPVQVRVLPVSDRHH---DY 552 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ RL G V D E++G + A + P ++VG + + +V ++ R G Sbjct: 553 ARRVEERLRAAGLRVEVDARDEKLGYKIRQAQVEKVPYMLVVGDREAQEGQVAVRSRDRG 612 Query: 425 IREDMSLEEVINYASHRFSNNR 446 SLE+ + + + + + Sbjct: 613 DLGSQSLEDFVRLITEKVAQRQ 634 >gi|257865905|ref|ZP_05645558.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257872238|ref|ZP_05651891.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC10] gi|257799839|gb|EEV28891.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257806402|gb|EEV35224.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC10] Length = 646 Score = 246 bits (628), Expect = 6e-63, Method: Composition-based stats. Identities = 76/441 (17%), Positives = 162/441 (36%), Gaps = 30/441 (6%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 F+ + +E RD +L L + + G+ WLP G + I +++ G Sbjct: 231 FIRLREEAKERDHRKLGKELELFM-LSPEVGAGLPFWLPKGATIRRTIERYIVDKEISLG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKS 124 + P + + DL+ SG +D Y ++M D D M + P + ++++ I S Sbjct: 290 YQHVYTPIMANVDLYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIHS 349 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR LP ++ + R E ++ + + + P+ K + + + + Sbjct: 350 YRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKEEFKRTLDLMIGV 409 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + R + + F + D++ Sbjct: 410 YEDFNITDYRFRLS-------------YRDPQNKDKYFDDDAMWENAQTMLKAAMDELEL 456 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ +L + +S ++ F ++ T+ G Sbjct: 457 DYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTYVG 505 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG++++ + + G + + + + +P +AP + S+I + + D Sbjct: 506 EDGENNHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQASIIPVSV--EAHSDY 562 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +I RL G V DD E++G + + P Q++VG + V+D+ V I+ + Sbjct: 563 AYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKIPYQIVVGDQEVNDATVNIRRYGSK 622 Query: 425 IREDMSLEEVINYASHRFSNN 445 + L ++ + N Sbjct: 623 ETQVEELNLFVDAMAAEVKNY 643 >gi|86131542|ref|ZP_01050140.1| Threonyl-tRNA synthetase [Dokdonia donghaensis MED134] gi|85817987|gb|EAQ39155.1| Threonyl-tRNA synthetase [Dokdonia donghaensis MED134] Length = 647 Score = 246 bits (628), Expect = 6e-63, Method: Composition-based stats. Identities = 80/447 (17%), Positives = 152/447 (34%), Gaps = 41/447 (9%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD +L L T + +G+ WLP G + + ++ Q + Sbjct: 229 KQYLELLEEAKKRDHRKLGKELELFT-FSQRVGQGLPLWLPKGAALRERLENFLKAAQKK 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSH 121 G + P + +L+ SG Y YG + + + + P + +I+ S Sbjct: 288 QGYEMVVSPHIGQKELYETSGHYAKYGADSFQPIQTPNEGEEFLLKPMNCPHHCEIYNSR 347 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY+ LP F + +R E G+ R R F DA+ F TP+ + K+ Sbjct: 348 PWSYKELPKRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFC-TPDQLDEEFMKVIDL 406 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 L +F LG + + D + +D + + Sbjct: 407 VLYVFGSLGFEDFTAQVSLR--------------DPENPDKYIGEDENWVKAENAILNAA 452 Query: 241 DIISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTKYSLP 297 LN +VE A Y D + D+L + ++ ++ F K S Sbjct: 453 KAKGLNYVVETGEAAFYGPKLDFM---VKDALGRSWQLGTIQVDYNLPERFELQYKGSDN 509 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 V + G+M A++ G +W ++L Sbjct: 510 E---------MHRPVMIHRAPFGSMERFVAILLEHTGGNFPLWLMPQQATILTL------ 554 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + + + L D+ GE +G + A++ P +I+G + D + Sbjct: 555 SEKYEKYAQNVLNLLENHEIRALIDNRGETMGKKIREAEMQKLPFMLIIGEQEEKDGTIS 614 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSN 444 ++ M+++ S ++ Sbjct: 615 VRRHGGEDLGSMTIDAFAKIVSTEIAS 641 >gi|256828741|ref|YP_003157469.1| prolyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028] gi|256577917|gb|ACU89053.1| prolyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028] Length = 580 Score = 246 bits (628), Expect = 6e-63, Method: Composition-based stats. Identities = 128/237 (54%), Positives = 167/237 (70%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK+++P L+E P +AE+ SHKL+LR GMI + + GIY+++PLG +A++ V I+REE Sbjct: 1 MLFSKFYVPTLKETPAEAEVISHKLLLRAGMIRKLTSGIYTYMPLGLRAINKVANIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+S+P +Q ADLW ESGR+D YGKE+LRL DR+ + GPTHEEV+TD+ R Sbjct: 61 MNRAGAQEISMPMVQPADLWQESGRWDFYGKELLRLKDRHGRDYCLGPTHEEVITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD EG SY M+ + Sbjct: 121 EVRSYRQLPINLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFDKDDEGVNASYQAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y R+F RLGL+ + A+SG IGG SHEF+VLADTGE + + E Sbjct: 181 YTRVFTRLGLEFRAVSADSGAIGGSFSHEFMVLADTGEDTLAVCTSCS-YAANLEKA 236 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 69/183 (37%), Positives = 107/183 (58%), Gaps = 2/183 (1%) Query: 253 TAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A +D+ + L D P +GIEVGH+F GTKYS M+ATF +GK+ Sbjct: 379 DAAPTGYADLRSITLDDPCPACGGSLTMPKGIEVGHVFKLGTKYSKSMNATFLDENGKEQ 438 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + MG YGIG RVVAA IE ++D G+I+P S+APF+I+++ + D+ +I+ Sbjct: 439 VIIMGCYGIGVSRVVAACIEQNNDANGMIFPPSIAPFEITILAMSTKDEKVMAKGREIHD 498 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L G D +DD E+ G +F ADLLG P+Q+++G K + +E+K+R TG + ++ Sbjct: 499 WLESQGIDTLFDDRDERPGVKFNEADLLGSPMQIVIGGKGLEKGVLEVKNRKTGEKRELP 558 Query: 431 LEE 433 + + Sbjct: 559 VAD 561 >gi|260548877|ref|ZP_05823099.1| prolyl-tRNA synthetase [Acinetobacter sp. RUH2624] gi|260408045|gb|EEX01516.1| prolyl-tRNA synthetase [Acinetobacter sp. RUH2624] Length = 571 Score = 246 bits (628), Expect = 6e-63, Method: Composition-based stats. Identities = 127/253 (50%), Positives = 173/253 (68%), Gaps = 1/253 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+Y+WLP+G + L V+AI+REE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGTRVLKKVDAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GA+E+ +P Q A LW ESGRY+ YG E+LR DR+D + GPTHEEV+TD+ R+ Sbjct: 61 MNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLRFKDRHDNPFVLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ + Sbjct: 121 ELKSYKQLPVNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHATQESLQETYDVMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P++A++G IGG SHEF VLA +GE + D+ E + Sbjct: 181 YSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLASSGEDDIAF-STESDYAANVEMAEAV 239 Query: 241 DIISLNSIVEQWT 253 + + +++ Sbjct: 240 LVGERAAPAQEFK 252 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 73/192 (38%), Positives = 104/192 (54%), Gaps = 3/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A D+ N D P+ K RGIEVGHIF GTKYS + G DGK Sbjct: 379 ERDAQIIEIFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGTKYSEALGCKVLGEDGK 438 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEK 367 V MG YGIG RVVAA IE ++D KGIIWP ++APF+I+++ + A +A E Sbjct: 439 PFTVTMGCYGIGVTRVVAAAIEQNYDDKGIIWPQAIAPFEIAIVPMNAHKSPRTLEAAEA 498 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +YA L G DV DD E+ G +F+ +L+G P ++++G K + E K R Sbjct: 499 LYAELQAQGFDVLLDDRNERPGVKFSDLELMGIPHRIVIGEKGLDAGTFEYKGRRDAEAS 558 Query: 428 DMSLEEVINYAS 439 +++ EE++ + Sbjct: 559 NLTKEELLAKLA 570 >gi|28871133|ref|NP_793752.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000] gi|81840044|sp|Q87Y24|SYP_PSESM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|28854383|gb|AAO57447.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000] Length = 571 Score = 246 bits (628), Expect = 6e-63, Method: Composition-based stats. Identities = 121/270 (44%), Positives = 174/270 (64%), Gaps = 10/270 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MNAVGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y++M ++ Sbjct: 121 ELNSYKQLPINMYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADNASLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F RLGLK P+ A++G IGG SHEF VLA++GE + + D+ E + Sbjct: 181 YSNVFSRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVF-SNGSDYAANIEKAEA- 238 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 V + A AAT ++ ++ Sbjct: 239 --------VPREKARAAATEELRLVDTPNA 260 Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 111/207 (53%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ + RGIEVGHIF GTKYS M Sbjct: 364 DDKHYFGVNWERDLPVPTVADLRNVVAGDPSPDGQGTLEIKRGIEVGHIFQLGTKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK + MG YGIG RVVAA IE + D GIIW D++APF+I+LI ++ Sbjct: 424 KCQVLGENGKPVNLAMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALIPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 R+A +K+YA L+ G +V DD + G +FA +L+G P +++V + +++ + Sbjct: 484 DAVREATDKLYAELTAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNL 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K R + +++ +V+++ R Sbjct: 544 EYKSRTESQPQAIAVADVLSFIQGRVK 570 >gi|254373138|ref|ZP_04988627.1| threonine-tRNA ligase [Francisella tularensis subsp. novicida GA99-3549] gi|151570865|gb|EDN36519.1| threonine-tRNA ligase [Francisella novicida GA99-3549] Length = 634 Score = 246 bits (628), Expect = 6e-63, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 144/442 (32%), Gaps = 41/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD L L + S GI W G + V +R N+ G Sbjct: 230 YLNMLEEAEKRDHRKIGKVLDLF--HFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG Y + M ++ P + ++ + + SY Sbjct: 288 CSEIRTPLIADFSLWQKSGHASKYAENMF-ATKSENRDFAIRPMNCPTCVQVYNTKLHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F + + + + Sbjct: 347 RDLPIRMAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEV- 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++ P E D D Sbjct: 406 YKDFGFNDFAVKIALRPENRIGDDE-----------------TWDKSEQMLKNALDANNV 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ A Y + H L D++ + + ++ G AT+ Sbjct: 449 SYELLPGEGAFYGPKIEFH---LKDAIGRSWQCGTIQLDFSMPQRLG--------ATYID 497 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G+ V + +G++ ++ + G +W V + + N D Sbjct: 498 KNGEKQVPVMLHRAIVGSLERFIGMLIEHYAGNLPLWLAPVQVAVMGISN------NQDD 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C++++ L K G D E+IG + LL P VI+G + I+ Sbjct: 552 YCKEVFTMLEKNGIRAKLDLRNEKIGFKIREHTLLRVPYLVILGKNEQEQKIITIRKHSG 611 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS+++ + + Sbjct: 612 EDLGQMSVDDFCAFLDKQIQAK 633 >gi|149001905|ref|ZP_01826859.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69] gi|147759714|gb|EDK66704.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69] Length = 435 Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 156/444 (35%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I ++ Sbjct: 17 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVNKEL 74 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 75 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 134 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 135 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 194 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 195 IDVYEDFNLTDYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 241 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 242 MGVDYFEAEGEAAFYGPKLDI---QIKTALGKEETLSTIQLD----FLLPERFD----LK 290 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG+DH M G+ + I + + + I ++ Sbjct: 291 YIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 346 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +L G D+ E++ + + P Q+IVG K + D V ++ Sbjct: 347 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 406 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +S++ + +N Sbjct: 407 GQKETQTVSVDNFVQAILADIANK 430 >gi|307132338|ref|YP_003884354.1| prolyl-tRNA synthetase [Dickeya dadantii 3937] gi|306529867|gb|ADM99797.1| prolyl-tRNA synthetase [Dickeya dadantii 3937] Length = 572 Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats. Identities = 151/434 (34%), Positives = 209/434 (48%), Gaps = 49/434 (11%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYMLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRFVDRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EISSYKQLPLNFYQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQVTYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y +IF R+ L P++A++G IGG+ SHEF VLA +GE + D+ E Sbjct: 181 YSKIFSRMDLDFRPVQADTGSIGGNASHEFQVLASSGEDDIVF-STESDYAANIELAEAV 239 Query: 236 --------------NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARG 281 D + ++ +VEQ+ P T K E Sbjct: 240 APEHGLSAPTQAMTLVDTPNAKTIAELVEQFAVPVEKTVKTLLVKAT----EESGHKLVA 295 Query: 282 IEVGHIFYFGTKYSLP-----MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 + V S TF + V+ G +G + + V+ Sbjct: 296 LLVRGDHELNEVKSEKLELVASPLTFATEEEIRATVKAGPGSLGPVNLPVPVVVDRTVAA 355 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA-------------RLSKVGCDV--FW 381 + I I L K G +V + Sbjct: 356 MSDFSAGANIDGKHYFGINWERDTALPQVADIRNVVEGDRSPDGKGTLLIKRGIEVGHIF 415 Query: 382 DDMGEQIGSQFAVA 395 Q+G +++ A Sbjct: 416 -----QLGKKYSEA 424 Score = 173 bits (439), Expect = 5e-41, Method: Composition-based stats. Identities = 70/186 (37%), Positives = 111/186 (59%), Gaps = 3/186 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K + RGIEVGHIF G KYS + AT +G DG++ + MG Sbjct: 384 VADIRNVVEGDRSPDGKGTLLIKRGIEVGHIFQLGKKYSEALKATVQGEDGRNQTLTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKV 375 YGIG RV+AA IE +HD +GIIWPD++APF+++++ + H ++ E IY +L Sbjct: 444 YGIGVTRVIAAAIEQNHDDRGIIWPDAIAPFQVAILPMNMHKSFRVQEVAEGIYQQLRAN 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G FA +L+G P +++G + + + ++E KHR G +E + +++ Sbjct: 504 GVDVLLDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDEIEYKHRRKGEKEMIKAGDIV 563 Query: 436 NYASHR 441 + + Sbjct: 564 EFLLSQ 569 >gi|297568238|ref|YP_003689582.1| prolyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2] gi|296924153|gb|ADH84963.1| prolyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2] Length = 576 Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats. Identities = 125/240 (52%), Positives = 163/240 (67%), Gaps = 1/240 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ LP L+E+P +AE+ SHKLMLR G I + + G+YS+LPLG A+ V I+REE Sbjct: 1 MRFSQLLLPTLKEDPAEAEVISHKLMLRGGFIRKLTAGVYSYLPLGLAAIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P +Q ADLW ESGR++ YG E+LR DR+ + GPTHEEV+TD+ R Sbjct: 61 MNRAGAQELLLPMVQPADLWRESGRWEKYGPELLRFKDRHQRESCLGPTHEEVITDLVRM 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I SYR LP YQ+Q KFRDE+RPRFG+MR REF+MKD YSFDL G++ +Y KM+ + Sbjct: 121 NIHSYRQLPVNLYQVQTKFRDEIRPRFGLMRGREFIMKDGYSFDLDEAGAELTYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GL + A++G IGG SHEF+VLA TGE V + D+ E + Sbjct: 181 YQRIFSRCGLAFRAVEADTGTIGGSFSHEFMVLAATGEDVVVICQHC-DYAANLEKATAN 239 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 67/185 (36%), Positives = 101/185 (54%), Gaps = 2/185 (1%) Query: 261 DVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ D P + RGIEVGHIF GT YS ++ATF G+ + MG +G Sbjct: 381 DIRMVNEDDRCPRCGGRLALTRGIEVGHIFKLGTNYSEALNATFLDDQGQSRHFVMGCFG 440 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R VAA IE +HD G+I+P +APF++ L+N+ D+V E++Y L+ G + Sbjct: 441 IGVSRTVAAAIEQNHDRDGMIFPLPIAPFQVILLNLTPKDEVISAEAERLYQALTADGIE 500 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ GS+F ADL+G P++++VG +F +D +EI+ R G + + Sbjct: 501 VLLDDRDERPGSKFKDADLIGIPIRLMVGKRFKNDGLLEIRTRADGQTSEATPAAAEAVI 560 Query: 439 SHRFS 443 + Sbjct: 561 KEMVA 565 >gi|313680219|ref|YP_004057958.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Oceanithermus profundus DSM 14977] gi|313152934|gb|ADR36785.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Oceanithermus profundus DSM 14977] Length = 649 Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats. Identities = 96/444 (21%), Positives = 164/444 (36%), Gaps = 38/444 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y + + RD +L L I KG+ WLP G + + A +R+EQ + Sbjct: 237 YLWQLEEAKKRDHRRLGRQLELF--HIDPMVGKGLVLWLPKGNVLREELVAFMRDEQIKR 294 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHIK 123 G ++ P + S +L+ SG Y Y + + D + P + I+ + Sbjct: 295 GYQLVTTPHIGSLELYKTSGHYPYYAESQFPPMELEDGEAYLLKPMNCPHHVRIYAMRPR 354 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP + +R E G+ R R F DA+ F TPE K + + L Sbjct: 355 SYRELPLRLAEFGTVYRFEQSGELHGLTRVRGFTQDDAHIFC-TPEQVKEEFLGVLDLTL 413 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++F LGL R I + D G + + D+ Sbjct: 414 KVFRTLGLSDFRAR--------------IGVRDPGSDKYVGDAEHWAVAERQIQEACDEA 459 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 +I E A Y D + D L ++ ++ + Sbjct: 460 GLDYTIEEGDAAFYGPKLDF---VVKDVLSREWQLGTIQVDYNLP--------ERFDIGY 508 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 KGADG++H + G++ ++ + +P +AP ++ ++ I Sbjct: 509 KGADGEEHRPVMIHRAPFGSLERFIGILI---EHFAGEFPLWLAPVQVVVVPITDRHH-- 563 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D K+ A L G V DD E++ ++ A+ P+ ++VG K + V ++ R Sbjct: 564 -DYARKVRAELEAAGLRVEVDDRPERMNAKIRDAETQKVPVILVVGDKETEEGTVAVRDR 622 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 TG R +L EV+ + R Sbjct: 623 RTGERTTRALSEVVRDLAERVRTR 646 >gi|134294675|ref|YP_001118410.1| prolyl-tRNA synthetase [Burkholderia vietnamiensis G4] gi|166980110|sp|A4JBC2|SYP_BURVG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|134137832|gb|ABO53575.1| prolyl-tRNA synthetase [Burkholderia vietnamiensis G4] Length = 578 Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats. Identities = 137/288 (47%), Positives = 183/288 (63%), Gaps = 5/288 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPIGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGALELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REFLMKDAYSFD G SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFLMKDAYSFDKDAAGLNESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y+RIF RLGL+ + A+SG IGG+ SHEF V+ADTGE + +F E + Sbjct: 181 YVRIFTRLGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYCPT-SEFAANIEAAEAL 239 Query: 240 ---DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 + + +E+ P A + E L L + + Sbjct: 240 PLIAERAAPAQAMEKVATPGKAKCEAVAELLAIPLERTIKSIVLATDN 287 Score = 179 bits (453), Expect = 1e-42, Method: Composition-based stats. Identities = 74/192 (38%), Positives = 107/192 (55%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +DV N K D P+ K V RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPDVADVRNVKKGDPSPDGKGVIDICRGIEVGHVFQLGTKYSEAMGATFLDESGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YG+G R++ A IE + D KGIIWP+S+APF++ L + ++ R+A +K+YA Sbjct: 442 LMGCYGVGVTRILGAAIEQNFDDKGIIWPESIAPFELVLCPMGYDRSEMVREAADKLYAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G DV DD GE+ G FA +L+G P ++++G + + D KVE + R + Sbjct: 502 LTAAGVDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKVEYQGRRDAEATLLPA 561 Query: 432 EEVINYASHRFS 443 + + + Sbjct: 562 DAAAATVTEKIR 573 >gi|302187169|ref|ZP_07263842.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642] Length = 571 Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats. Identities = 117/237 (49%), Positives = 163/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW ESGR++ YG E++RL D +++ GPTHEEV+TD+ R+ Sbjct: 61 MDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDLHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E + +Y++M ++ Sbjct: 121 ELNSYKQLPINMYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADHESLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF RLGLK P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSD-GSDYAANIEKA 236 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 112/207 (54%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ K RGIEVGHIF GTKYS M Sbjct: 364 DDKHYFGVNWERDLPVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGTKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK + MG YGIG RVVAA IE + D GIIW D++APF+I+LI ++ Sbjct: 424 KCQVLGENGKPVNLAMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALIPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + R+A +K+YA L+ G +V DD + G +FA +L+G P +++V + +++ + Sbjct: 484 EAVREATDKLYADLTAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNL 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K R + +++ V+++ + + Sbjct: 544 EYKSRTESQPQAIAVAGVLSFIQGKVN 570 >gi|329298700|ref|ZP_08256036.1| prolyl-tRNA synthetase [Plautia stali symbiont] Length = 572 Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats. Identities = 121/237 (51%), Positives = 164/237 (69%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTQYLLSTLKETPSDAEVISHQLMLRAGMIRKLASGLYTWLPTGIRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR+ DR+++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWEESGRWEQYGPELLRIKDRHERPFVLGPTHEEVVTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNVYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQESLQETYDAMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL ++A++G IGG SHEF VLA +GE V D+ E Sbjct: 181 YSQSFSRMGLDFRAVQADTGSIGGSGSHEFQVLAQSGEDDVIF-SSESDYAANIEKA 236 Score = 174 bits (441), Expect = 3e-41, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 110/193 (56%), Gaps = 3/193 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P D+ N D P+ K + RGIEVGHIF GTKYS M A +G DG++ + Sbjct: 380 PETRVEDIRNVVEGDPSPDGKGMLMIKRGIEVGHIFQLGTKYSDAMKAAVQGEDGRNQIM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWP ++APF+++++ + H ++ E++Y Sbjct: 440 TMGCYGIGITRVVAAAIEQNHDERGIIWPAALAPFEVAILPMNMHKSFRVKELAEQLYNE 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P +++G + + + ++E K R ++ + Sbjct: 500 LRAKGIDVILDDRKERPGVMFADMELIGVPHTIVIGDRNLDNQEIEYKARAASEKQMIKQ 559 Query: 432 EEVINYASHRFSN 444 +++++ S + Sbjct: 560 HDIVDFLSRALNK 572 >gi|239907072|ref|YP_002953813.1| prolyl-tRNA synthetase [Desulfovibrio magneticus RS-1] gi|259511592|sp|C4XTD0|SYP_DESMR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|239796938|dbj|BAH75927.1| prolyl-tRNA synthetase [Desulfovibrio magneticus RS-1] Length = 575 Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats. Identities = 133/237 (56%), Positives = 169/237 (71%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y+ P L+E P +AE+ SHKL+LR GMI + + GIY++LPLG KAL+NV I+REE Sbjct: 1 MRLSRYYAPTLKETPAEAEVISHKLLLRAGMIRKLTAGIYTYLPLGLKALNNVAKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q ADLW ESGR+D YG+E+LR DR+D+ GPTHEEV+TD+ R Sbjct: 61 MDRAGALEILMPAVQPADLWKESGRWDFYGRELLRFVDRHDRESCLGPTHEEVVTDLVRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD G+ SY M+ + Sbjct: 121 EIRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFDKDDSGADASYWGMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF RLGLK + A+SG IGG SHEF+VLADTGE + D+ E Sbjct: 181 YARIFKRLGLKFRAVAADSGAIGGSFSHEFMVLADTGEDTIVACPAC-DYGANVEKA 236 Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 69/188 (36%), Positives = 106/188 (56%), Gaps = 2/188 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A + +D+ D P+ +GIEVGH+F G KYS ++ATF GK Sbjct: 372 GRDANVVSYTDLREVAPGDPCPKCGALLDFTKGIEVGHVFKLGLKYSKALNATFLDEAGK 431 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + ++ MG YGIG R+VA+ IE +HD GI++P ++APF+ +LIN+ D+ ++I Sbjct: 432 EQFMIMGCYGIGVSRIVASAIEQNHDDGGIVFPPTIAPFEAALINLSPKDETACAKADEI 491 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 YA L+ G + DD E+ G +F ADL+G P+Q+ +G K ++ VE K R TG + + Sbjct: 492 YAALTAAGIETLLDDRDERPGVKFKDADLMGHPIQLTLGGKGLARGIVETKDRRTGEKGE 551 Query: 429 MSLEEVIN 436 + LE Sbjct: 552 LPLEGFFE 559 >gi|311069390|ref|YP_003974313.1| threonyl-tRNA synthetase [Bacillus atrophaeus 1942] gi|310869907|gb|ADP33382.1| threonyl-tRNA synthetase [Bacillus atrophaeus 1942] Length = 643 Score = 246 bits (627), Expect = 7e-63, Method: Composition-based stats. Identities = 83/427 (19%), Positives = 156/427 (36%), Gaps = 33/427 (7%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L + +G+ WLP G + I +++ G + P Sbjct: 241 AKERDHRKLGKELKLFAN-SQKVGQGLPLWLPKGATIRRVIERYIVDKELSLGYEHVYTP 299 Query: 73 TLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 L S +L+ SG ++ Y M + +++ + P + I+++ I SYR LP Sbjct: 300 VLGSKELYETSGHWNHYQDGMFPPIELDNETLALRPMNCPHHMMIYKNDIHSYRELPIRI 359 Query: 133 YQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 ++ R E+ G+ R R + DA+ F + + ++ GL Sbjct: 360 AELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTVR-LIQDVYEDFGLN 418 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIISLNSIVE 250 R D +T+ + D M S D+I S E Sbjct: 419 DYTFRLS--------------YRDPEDTEKYFDDDEMWNKAQSMLKDAMDEIGSDYYEAE 464 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y DV ++ ++ + + +S ++ F ++ T+ G DGK H Sbjct: 465 GEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPERFD----LTYVGEDGKQH 513 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + G + + + + P +AP + +I + V D +K+ Sbjct: 514 RPVVIHR--GVVSTMERFVAFLIEEHKGALPTWLAPVQFQVIPVSP--SVHLDYAKKVQE 569 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 RL + G V D E+IG + A + P ++VG + + V ++ E +S Sbjct: 570 RLQREGLRVEVDIRDEKIGYKIREAQMQKIPYMLVVGDQEAENGAVNVRKYGEQKSETIS 629 Query: 431 LEEVINY 437 L++ + Sbjct: 630 LDDFVKK 636 >gi|312111641|ref|YP_003989957.1| prolyl-tRNA synthetase [Geobacillus sp. Y4.1MC1] gi|311216742|gb|ADP75346.1| prolyl-tRNA synthetase [Geobacillus sp. Y4.1MC1] Length = 567 Score = 246 bits (627), Expect = 7e-63, Method: Composition-based stats. Identities = 122/235 (51%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ F+P L+E P DAE+ SH+L+LR G I Q + G+Y++LPLGQ+ L V AIIREE Sbjct: 1 MRQSQSFIPTLREVPADAEVKSHQLLLRAGFIRQSASGVYTFLPLGQRVLQKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P LQ A+LW +SGR+ SYG E++RL DR+++ GPTHEE++T + R Sbjct: 61 MNRAGAVELLMPALQPAELWQQSGRWYSYGPELMRLKDRHERNFALGPTHEEMITTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ+KFRDE RPRFG++R REF+MKDAYSF + E +YNKM+ + Sbjct: 121 EVKSYKRLPLTLYQIQVKFRDEKRPRFGLLRGREFIMKDAYSFHTSQESLDETYNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL + A+SG IGG +HEF+VL++ GE + S D+ E Sbjct: 181 YSNIFRRCGLNFRAVIADSGAIGGKDTHEFMVLSEIGEDTIAYSD-ASDYAANIE 234 Score = 172 bits (436), Expect = 9e-41, Method: Composition-based stats. Identities = 67/190 (35%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ K RGIEVGH+F GT+YS ++AT+ +G+ + Sbjct: 378 VSEYADLRFIQEGDPSPDGKGTIRFARGIEVGHVFKLGTRYSEALNATYLDENGRSQTMI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R+VAA+ E D G++WP +VAPF + LI A + R ++ Y +L Sbjct: 438 MGCYGIGVSRLVAAIAEQFADENGLVWPVAVAPFHVHLITANAKSEEQRQLADEWYEKLR 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V +DD E+ G +FA +DL+G P++V VG + + VE+K R TG ++ + E Sbjct: 498 QAGLEVLYDDRPERAGVKFADSDLIGIPVRVTVGKR-AGEGVVEVKVRQTGESVEVPVHE 556 Query: 434 VINYASHRFS 443 +I+ Sbjct: 557 LIDTIQRLLQ 566 >gi|78357249|ref|YP_388698.1| prolyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|114152190|sp|Q30Z93|SYP_DESDG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|78219654|gb|ABB39003.1| prolyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 574 Score = 246 bits (627), Expect = 7e-63, Method: Composition-based stats. Identities = 128/266 (48%), Positives = 178/266 (66%), Gaps = 7/266 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S +++P L+E P DAE+ SHKL++R GMI + + GIY +LPLG ++++ +I+R+E Sbjct: 1 MRWSNFYIPTLKEAPADAEVVSHKLLIRAGMIRKLTSGIYIYLPLGLRSIEKAASIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E+ +P +Q ADLW ESGR+D YGKE+LR++DR+ + GPTHEEV+TD+ R Sbjct: 61 MNSAGAQELLMPMVQPADLWQESGRWDFYGKELLRISDRHGRDYCLGPTHEEVITDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD +G SY M+ + Sbjct: 121 EVRSYRQLPLNLYQIQTKFRDEIRPRFGLMRGREFMMKDAYSFDRDAQGLDLSYRAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF R+GLK + A+SG IGG SHEF+VLA+TGE + D D+ E Sbjct: 181 YMKIFSRMGLKFRAVEADSGSIGGSFSHEFMVLAETGEDTIAFCHDC-DYSANVER---- 235 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEK 266 + +++ AP A +VH Sbjct: 236 --AEVVCTLDECDAPVAGVEEVHTPD 259 Score = 162 bits (411), Expect = 7e-38, Method: Composition-based stats. Identities = 70/195 (35%), Positives = 104/195 (53%), Gaps = 5/195 (2%) Query: 257 AATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 + +D+ D P RGIEVGH+F GTKYS M F +GK+ + M Sbjct: 378 SGYADLRMITDKDPCPRCSGTLELTRGIEVGHVFKLGTKYSEAMGCKFLDENGKEQVMLM 437 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G YGIG RVVAA IE + D GI++P +APF++ L+N+ + +++Y + Sbjct: 438 GCYGIGVSRVVAACIEQNSDENGIVFPPPIAPFEVLLLNLDGKNDDVNARVDELYGAVQA 497 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 GCDV DD E+ G +F ADL+G P+Q++VG K ++ VE K R TG + ++ ++ Sbjct: 498 AGCDVLMDDRNERPGVKFKDADLIGVPMQLVVGGKGLARGIVEAKDRRTGEKTELPVDGF 557 Query: 435 INYASHRFSNNRPVL 449 + R VL Sbjct: 558 AQAFAAW---RRQVL 569 >gi|288905772|ref|YP_003430994.1| Threonyl-tRNA synthetase [Streptococcus gallolyticus UCN34] gi|325978807|ref|YP_004288523.1| threonyl-tRNA synthetase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732498|emb|CBI14070.1| Threonyl-tRNA synthetase [Streptococcus gallolyticus UCN34] gi|325178735|emb|CBZ48779.1| threonyl-tRNA synthetase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 648 Score = 246 bits (627), Expect = 7e-63, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 157/445 (35%), Gaps = 33/445 (7%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y + RD +L L MI + +G+ WLP G + I +++ + Sbjct: 231 YLKQRQEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPDGATIRRTLERYIVDKEVAS 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIK 123 G + + P L S DL+ SG +D Y ++M D D + + P + +++ H+ Sbjct: 289 GYLHVYTPPLASVDLYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNCPHHIQVYKHHVH 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP +I + R E ++ + + +TPE + + K + Sbjct: 349 SYRELPIRIAEIGMMHRYEKSGALSGLQRVREMSLNDGHLFVTPEQIQEEFQKALQLIID 408 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ L R + + + + D++ Sbjct: 409 VYEDFNLTEYRFRLSLRD-------------PKDTHKYYDDDEMWENAQSMLKAALDEMG 455 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 E A Y D+ ++ +L + +S ++ F ++ T+ Sbjct: 456 VEYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERF----GLTYI 504 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 GADG++H M G+ + I + + I ++ D Sbjct: 505 GADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQV----TVIPVSNEAHVD 560 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L G V D+ E++ + + P Q+IVG K ++D V ++ + Sbjct: 561 YAWEVAKVLRDKGVRVDVDERNEKMQLKIRQSQTKKIPYQLIVGDKEMADKTVNVRRYGS 620 Query: 424 GIREDMSLEEVINYASHRFS-NNRP 447 +++E ++ + +RP Sbjct: 621 KQTHTEAIDEFVDNILADINRKSRP 645 >gi|306831875|ref|ZP_07465030.1| threonine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304425801|gb|EFM28918.1| threonine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 648 Score = 246 bits (627), Expect = 7e-63, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 157/445 (35%), Gaps = 33/445 (7%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y + RD +L L MI + +G+ WLP G + I +++ + Sbjct: 231 YLKQRQEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPDGATIRRTLERYIVDKEVAS 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIK 123 G + + P L S DL+ SG +D Y ++M D D + + P + +++ H+ Sbjct: 289 GYLHVYTPPLASVDLYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNCPHHIQVYKHHVH 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP +I + R E ++ + + +TPE + + K + Sbjct: 349 SYRELPIRIAEIGMMHRYEKSGALSGLQRVREMSLNDGHLFVTPEQIQEEFQKALQLIID 408 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ L R + + + + D++ Sbjct: 409 VYEDFNLTEYRFRLSLRD-------------PKDTHKYYDDDEMWENAQSMLKAALDEMG 455 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 E A Y D+ ++ +L + +S ++ F ++ T+ Sbjct: 456 VDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERF----GLTYI 504 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 GADG++H M G+ + I + + I ++ D Sbjct: 505 GADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQV----TVIPVSNEAHVD 560 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L G V D+ E++ + + P Q+IVG K ++D V ++ + Sbjct: 561 YAWEVAKVLRDKGVRVDVDERNEKMQLKIRQSQTKKIPYQLIVGDKEMADKTVNVRRYGS 620 Query: 424 GIREDMSLEEVINYASHRFS-NNRP 447 +++E ++ + +RP Sbjct: 621 KQTHTEAIDEFVDNILADINRKSRP 645 >gi|228469293|ref|ZP_04054319.1| threonyl-tRNA synthetase [Porphyromonas uenonis 60-3] gi|228309192|gb|EEK17794.1| threonyl-tRNA synthetase [Porphyromonas uenonis 60-3] Length = 650 Score = 246 bits (627), Expect = 7e-63, Method: Composition-based stats. Identities = 81/443 (18%), Positives = 155/443 (34%), Gaps = 37/443 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + +G+ WLP G + + ++ Q R G Sbjct: 234 YLALLEEAKKRDHRKIGKELELFA-FSQRVGQGLPLWLPRGTQLRLKLEDFLKRIQKRYG 292 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHIK 123 ++ P + + +L+ SG Y YG + + + +A + P + +I++ Sbjct: 293 YQQVMTPHIGNVELYKTSGHYAKYGADSFQVITTPQEGEAFMLKPMNCPHHCEIYKLKPH 352 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + +R E G+ R R F DA+ F P+ K + K+ Sbjct: 353 SYRDLPVRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCR-PDQVKEEFLKVMEIIF 411 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 IF L ++ + + T ++ S++ D + + Sbjct: 412 IIFRALDFENFEAQISLR-------------SQTDRSKYIGSEENWDRAEQAIIEACQEA 458 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y D + D+L ++ ++ + Sbjct: 459 GLPAHVEYDEAAFYGPKLDFM---VKDALGRRWQLGTIQVDYNLP--------ERFELEY 507 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G D + H + G+M AV+ GK +W + I + Sbjct: 508 TGEDNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LSPDQVVILPVSERF 561 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ A LS+ V DD E++G + +L P +IVG + +D V ++ + Sbjct: 562 NDYAYEVAAALSEQDISVSVDDRNEKVGRKIRDNELKRIPYMLIVGEQEQADGTVSVRKQ 621 Query: 422 LTGIREDMSLEEVINYASHRFSN 444 G + + Sbjct: 622 GEGDAGTEKISTFAERILKEIES 644 >gi|237749052|ref|ZP_04579532.1| prolyl-tRNA synthetase [Oxalobacter formigenes OXCC13] gi|229380414|gb|EEO30505.1| prolyl-tRNA synthetase [Oxalobacter formigenes OXCC13] Length = 587 Score = 246 bits (627), Expect = 7e-63, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 164/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ L+E P DAEI SHKLM+RTGMI + GIY+++P+G + + + IIREE Sbjct: 9 MRASQFFISTLKEAPADAEIISHKLMVRTGMIRRLGSGIYAYMPMGLRVIHKIENIIREE 68 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW E+GR+ YG E+LR+ DR+D+ I PT EEV+TDI R+ Sbjct: 69 MNRAGAVELLMPLVQPAELWQETGRWQKYGPELLRIKDRHDRDFIIQPTSEEVITDIARN 128 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD +G K SY MF + Sbjct: 129 VIKSYRQLPINFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDVDGLKKSYQIMFDA 188 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y++IF R GLK P+ A++G IGG SHEF V+A+TGE + ++ E Sbjct: 189 YVKIFTRFGLKFRPVAADNGAIGGSGSHEFHVIAETGEDALVY-SRESEYAANME 242 Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 64/190 (33%), Positives = 106/190 (55%), Gaps = 3/190 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D N D P+ K RGIEVGH+F GT+YS M+A++ +GK +QMG Y Sbjct: 398 ADFRNVVEGDPSPDGKGTLAIQRGIEVGHVFQLGTRYSEDMNASYLDENGKPQLMQMGCY 457 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVG 376 GIG R+V A IE ++D KGIIWP S+APF++ L + + + +++Y L + G Sbjct: 458 GIGVTRIVGAAIEQNNDDKGIIWPTSIAPFEVVLCPLGYDRSEAVKKTADELYESLKQSG 517 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD GE+ G F+ +L+G P ++++G + + D K+E + R + + ++ Sbjct: 518 IDVIMDDRGERPGVMFSDWELIGVPHRIVIGDRGLKDGKLEYQGRRDTEATAIPVGDMAQ 577 Query: 437 YASHRFSNNR 446 + + + + Sbjct: 578 FVIAKVAAEK 587 >gi|167564170|ref|ZP_02357086.1| prolyl-tRNA synthetase [Burkholderia oklahomensis EO147] gi|167571291|ref|ZP_02364165.1| prolyl-tRNA synthetase [Burkholderia oklahomensis C6786] Length = 578 Score = 246 bits (627), Expect = 7e-63, Method: Composition-based stats. Identities = 149/401 (37%), Positives = 207/401 (51%), Gaps = 18/401 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPIGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKQNDFVIGPTHEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REFLMKDAYSFD EG K SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFLMKDAYSFDRDHEGLKESYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD-- 238 Y+R+F R+GL+ P+ A++G IGG SHEF V+ADTGE + DF E + Sbjct: 181 YVRVFTRIGLEFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPT-SDFAANVEAAEAL 239 Query: 239 --FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG----HIFYF-- 290 + +++ P A + E L L + + I+ Sbjct: 240 PLLASRAAPAEAMQKVATPGKAKCEAVAELLGIPLERTIKSIVLATDNDGAEPTIWLLML 299 Query: 291 --GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 + +A G G + + K + Sbjct: 300 RGDHDLNEIKTAKLPGLAGYRFATETEIVDW--FGTPPGYLGPIGTKKPVRVIADRTVAN 357 Query: 349 ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 +S + A++ A L + V D + G Sbjct: 358 MSDFVVGANEVDYHVAGVNWGRDLPE---PVIADIRNVKAG 395 Score = 176 bits (445), Expect = 8e-42, Method: Composition-based stats. Identities = 71/192 (36%), Positives = 103/192 (53%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPVIADIRNVKAGDPSPDGKGALDICRGIEVGHVFQLGTKYSEAMGATFIDESGKAQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE + D KGIIWP+++APF++ L + R+A +++YA Sbjct: 442 VMGCYGIGITRILGAAIEQNFDDKGIIWPEAIAPFEVVLCPMGYDRSDAVREAADQLYAA 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G DV DD GE+ G FA +L+G P ++++G + + D KVE + R + Sbjct: 502 LAAAGVDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKVEYQGRRDAEATLLPA 561 Query: 432 EEVINYASHRFS 443 + + Sbjct: 562 DSAAAVIVEKVR 573 >gi|120434969|ref|YP_860655.1| threonyl-tRNA synthetase [Gramella forsetii KT0803] gi|117577119|emb|CAL65588.1| threonyl-tRNA synthetase [Gramella forsetii KT0803] Length = 667 Score = 246 bits (627), Expect = 7e-63, Method: Composition-based stats. Identities = 83/437 (18%), Positives = 157/437 (35%), Gaps = 38/437 (8%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L T + +G+ WLP G + + +++ Q + G + P Sbjct: 255 AKKRDHRKLGKELELFT-FSQKVGQGLPLWLPKGAALRERLENFLKKAQKKAGYEMVVSP 313 Query: 73 TLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 + S +L+V SG Y YG++ + + + P + +++ + SYR+LP Sbjct: 314 HIGSKELYVTSGHYAKYGEDSFQPISTPNEGEEFMLKPMNCPHHCEMYNASSWSYRDLPK 373 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F + +R E G+ R R F DA+ F + + + + K+ L +F LG Sbjct: 374 RFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCMPEQLDEE-FKKVIDLTLYVFSSLG 432 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + D + + D S + D LN +V Sbjct: 433 FEDFTAQVSLR--------------DPDNKEKYIGSDDAWEKAESAIINAADEKGLNYVV 478 Query: 250 E-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 E A Y D + D+L + ++ ++ T+KG+D + Sbjct: 479 ETGEAAFYGPKLDFM---VKDALGRSWQLGTIQVDYNLP--------ERFDLTYKGSDNE 527 Query: 309 DHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 H + G+M A++ G +W +SL + +K Sbjct: 528 SHRPVMIHRAPFGSMERFIAILLEHTGGNFPLWLMPEQAIILSL------SEKYEKYSQK 581 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + L D+ E IG + A++ +P +IVG + D + ++ G Sbjct: 582 VLTLLENNEIRALADNRNETIGKKIREAEVNKYPYMLIVGEQEAKDGTISVRKHSEGDLG 641 Query: 428 DMSLEEVINYASHRFSN 444 M +E+ N + + Sbjct: 642 TMKIEDFANLINTEIDS 658 >gi|138894777|ref|YP_001125230.1| prolyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2] gi|166980126|sp|A4IMD1|SYP_GEOTN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|134266290|gb|ABO66485.1| Prolyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2] Length = 567 Score = 246 bits (627), Expect = 7e-63, Method: Composition-based stats. Identities = 120/235 (51%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ F+P L+E P DAE+ SH+L+LR G + Q + G+Y++LPLGQ+ L V AIIREE Sbjct: 1 MRQSQGFIPTLREVPADAEVKSHQLLLRAGFVRQSASGVYTFLPLGQRVLQKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P LQ A+LW +SGR+ SYG E++RL DR+++ + GPTHEE++T I R Sbjct: 61 MNRAGALELLMPALQPAELWQQSGRWYSYGPELMRLKDRHERDFVLGPTHEEMITTIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +K+Y+ LP YQIQ KFRDE RPRFG++R REF+MKDAYSF + E +YNKM+ + Sbjct: 121 EVKTYKRLPLILYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHTSQESLDETYNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YANIFRRCGLNFRAVIADSGAMGGKDTHEFMVLSDIGEDTIAYSD-ASDYAANIE 234 Score = 170 bits (430), Expect = 5e-40, Method: Composition-based stats. Identities = 72/191 (37%), Positives = 104/191 (54%), Gaps = 3/191 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 + +D+ + D P+ RGIEVGH+F GTKYS M+A + +G+ + Sbjct: 377 AVSQYADLRFVQEGDPSPDGNGTIRFARGIEVGHVFKLGTKYSEAMNAVYLDENGRTQTM 436 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R+VAA+ E D G++WP SVAPF + L+ A R E+ Y +L Sbjct: 437 IMGCYGIGVSRLVAAIAEQFADENGLVWPVSVAPFHVHLLTANAKSDEQRMLAEEWYEKL 496 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 + G DV +DD E+ G +FA +DL+G PL+V VG + S+ VE+K R TG D+ + Sbjct: 497 GQAGFDVLYDDRPERAGVKFADSDLIGIPLRVTVGKR-ASEGVVEVKVRKTGETFDVPVG 555 Query: 433 EVINYASHRFS 443 E+I Sbjct: 556 ELIETVRRLLQ 566 >gi|148269334|ref|YP_001243794.1| threonyl-tRNA synthetase [Thermotoga petrophila RKU-1] gi|166225512|sp|A5IJ45|SYT_THEP1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|147734878|gb|ABQ46218.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Thermotoga petrophila RKU-1] Length = 640 Score = 246 bits (627), Expect = 7e-63, Method: Composition-based stats. Identities = 90/443 (20%), Positives = 167/443 (37%), Gaps = 41/443 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E R D L L + +++ G+ +LP G L+ + RE G Sbjct: 229 YLKFLEEAQRRDHRKLGPHLELFM-LNTEYAPGMPFFLPKGVVVLNELMRFSRELHRERG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW SG +D Y + M +++++ P + +++S SY Sbjct: 288 YQEIFTPLIMNEQLWKISGHWDHYAENM-YFIEKDEERYAVKPMNCPGHILVYKSRTVSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F++ R E G+MR R F DA+ F TP+ + + I Sbjct: 347 RDLPLRFFEFGRVHRYERSGVLHGLMRVRSFTQDDAHIFC-TPDQIEEEILGVLDLINTI 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G V T + + + + Sbjct: 406 YGQFGFTYR------------------VELSTMPEDHMGDEAIWEKATTALKNALERAGL 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H + DS+ + + ++ + T+ G Sbjct: 448 SYKVNEGEGAFYGPKIDFH---IRDSIGREWQCATIQLDF--------MMPEKFNVTYIG 496 Query: 305 ADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D K+H V + G++ ++ G W +AP ++++I I + D Sbjct: 497 PDNKEHRAVMIHRAIYGSLERFFGILIEHFAGAFPTW---LAPIQVAVIPI---SEKHND 550 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 EKI R+S+ G VF+D+ E +G + A P +I+G K + K+ ++ R Sbjct: 551 GAEKIAKRISQEGFRVFFDNRRETLGYRIRQAQTQKIPYMIILGDKELESGKISVRTRTG 610 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 +D+ LE + + + + Sbjct: 611 KEIKDVDLEHFVETLRNEVLSRK 633 >gi|257885297|ref|ZP_05664950.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,501] gi|257821149|gb|EEV48283.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,501] Length = 645 Score = 246 bits (627), Expect = 7e-63, Method: Composition-based stats. Identities = 78/448 (17%), Positives = 161/448 (35%), Gaps = 34/448 (7%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIRE 59 + K ++ + +E RD +L L M+ + G+ WLP G + I + Sbjct: 224 KALKEYIRLREEAKERDHRKLGKELDLF--MVSPEVGSGLPFWLPKGATIRRTIERYIVD 281 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIF 118 ++ G + P + +L+ SG +D Y ++M D D M + P + ++ Sbjct: 282 KEVSLGYQHVYTPIMGDVELYKTSGHWDHYQEDMFPPMDMGDGEMLVLRPMNCPHHMMVY 341 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 ++ I SYR LP ++ + R E ++ + + + P+ K + + Sbjct: 342 KNTIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTL 401 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NT 237 + ++ + R D T + D M + Sbjct: 402 ELMVAVYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKA 447 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D++ E A Y DV ++ +L + +S ++ F ++ Sbjct: 448 AMDELELDYFEAEGEAAFYGPKLDV---QVKTALGTEETLSTIQLD----FLLPERFD-- 498 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ G DG++ + + + G + + + + +P +AP + ++I + Sbjct: 499 --LTYVGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV- 554 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D +I RL G V DD E++G + + P Q++VG K + D+ V Sbjct: 555 -DAHGDYAYEIKERLQTKGLRVEVDDRNEKMGYKIRASQTQKIPYQLVVGDKELEDATVN 613 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ + L I+ N Sbjct: 614 VRRYGSKETAVEDLNIFIDAMEAEVKNY 641 >gi|332878463|ref|ZP_08446184.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683558|gb|EGJ56434.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 647 Score = 246 bits (627), Expect = 8e-63, Method: Composition-based stats. Identities = 83/445 (18%), Positives = 152/445 (34%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD ++ L + KG+ WLP G + +++ Q R Sbjct: 231 EYLTLLEEAKKRDHRKIGKEMELFM-FSERVGKGLPMWLPKGTALRLRLEDFLKKIQKRY 289 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 G ++ P + +L+V SG Y YGK+ + D+ + P + +I+ Sbjct: 290 GYQQVMTPHIGGKNLYVTSGHYAHYGKDSFQPIHTPEADEEYMLKPMNCPHHCEIYAWKP 349 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + +R E G+ R R F DA+ F + M Sbjct: 350 RSYKDLPLRIAEFGTVYRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFIRVM---- 405 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G + D I L D + + D + + + Sbjct: 406 -----------EIIQIIFGALNFDTFEAQISLRDPNNREKYIGSDEVWEEAENAIIEACK 454 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 LN+ VE A Y D + D+L ++ ++ Sbjct: 455 EKGLNAKVEYGEAAFYGPKLDFM---VKDALGRRWQLGTIQVDYNLP--------ERFKL 503 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G D + H + G+M AV+ G +W + I + Sbjct: 504 EYTGEDNQKHRPVMIHRAPFGSMERFCAVLIEHTAGHFPLW------LTPDQVAILPISE 557 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D +K+ A + DD E+IG + ++ P +IVG K +D V ++ Sbjct: 558 KFNDYAQKLCAYFDEQDVRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAADGTVSVR 617 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M E+ + N Sbjct: 618 KQGEGDQGSMKFEDFAKKINEEVRN 642 >gi|251788479|ref|YP_003003200.1| prolyl-tRNA synthetase [Dickeya zeae Ech1591] gi|247537100|gb|ACT05721.1| prolyl-tRNA synthetase [Dickeya zeae Ech1591] Length = 572 Score = 246 bits (627), Expect = 8e-63, Method: Composition-based stats. Identities = 153/434 (35%), Positives = 209/434 (48%), Gaps = 49/434 (11%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYMLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRFVDRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ MF + Sbjct: 121 EISSYKQLPLNFYQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQVTYDAMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y +IF R+ L P++A++G IGG+ SHEF VLA +GE + D+ E Sbjct: 181 YSKIFSRMDLDFRPVQADTGSIGGNASHEFQVLASSGEDDIVF-STASDYAANIELAEAV 239 Query: 236 --------------NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARG 281 D + ++ +V Q+ P T K E Sbjct: 240 APEHSLSAPTQPMTLVDTPNAKTIAELVAQFNLPVEKTVKTLLVKAT----EESGHKLVA 295 Query: 282 IEVGHIFYFGTKYSLP-----MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 + V + TF D V+ G +G + + VI Sbjct: 296 LLVRGDHELNEVKAEKLELVASPLTFATEDEIRAVVKAGPGSLGPVNMPVPVIIDRTVAV 355 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA-------------RLSKVGCDV--FW 381 + I V I L K G +V + Sbjct: 356 MSDFSAGANIDGKHYFGINWERDVALPQVADIRNVVEGDRSPDGKGTLLIKRGIEVGHIF 415 Query: 382 DDMGEQIGSQFAVA 395 Q+G +++ A Sbjct: 416 -----QLGKKYSEA 424 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 69/186 (37%), Positives = 110/186 (59%), Gaps = 3/186 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K + RGIEVGHIF G KYS + AT +G DG++ + MG Sbjct: 384 VADIRNVVEGDRSPDGKGTLLIKRGIEVGHIFQLGKKYSEALKATVQGEDGRNQTLTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKV 375 YGIG RV+AA IE +HD +GIIWPD++ PF+++++ + H ++ E IY +L Sbjct: 444 YGIGVTRVIAAAIEQNHDDRGIIWPDAITPFQVAILPMNMHKSFRVQEVAEGIYQQLRAN 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G FA +L+G P +++G + + + ++E KHR G +E + +++ Sbjct: 504 GIDVLLDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDEIEYKHRRKGEKEMIKAGDIV 563 Query: 436 NYASHR 441 + + Sbjct: 564 EFLLSQ 569 >gi|320547252|ref|ZP_08041545.1| threonine--tRNA ligase [Streptococcus equinus ATCC 9812] gi|320448140|gb|EFW88890.1| threonine--tRNA ligase [Streptococcus equinus ATCC 9812] Length = 697 Score = 246 bits (627), Expect = 8e-63, Method: Composition-based stats. Identities = 78/445 (17%), Positives = 155/445 (34%), Gaps = 33/445 (7%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y + RD +L L MI + +G+ WLP G + I +++ + Sbjct: 280 YLKQRQEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPDGATIRRTLERYIVDKEVAS 337 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIK 123 G + + P L S DL+ SG +D Y ++M D D + + P + +++ H+ Sbjct: 338 GYLHVYTPPLASVDLYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNCPHHIQVYKHHVH 397 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP +I + R E ++ + + +TPE + + K + Sbjct: 398 SYRELPIRIAEIGMMHRYEKSGALSGLQRVREMSLNDGHLFVTPEQIQDEFQKALQLIID 457 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ L R + + + + D++ Sbjct: 458 VYEDFNLTDYRFRLSLRD-------------PKDTHKYYDDDEMWENAQSMLKAALDEMG 504 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 E A Y D+ ++ +L + +S ++ F ++ T+ Sbjct: 505 VDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERF----GLTYV 553 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 GADG++H M G+ + I + + I ++ D Sbjct: 554 GADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQV----TVIPVSNEAHVD 609 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L G V D+ E++ + + P Q+IVG K ++D V ++ + Sbjct: 610 YAWEVAKLLRDKGVRVDVDERNEKMQLKIRQSQTKKIPYQLIVGDKEMADKTVNVRRYGS 669 Query: 424 GIREDMSLEEVINYASHRF-SNNRP 447 S++E + +RP Sbjct: 670 KQTHTESIDEFVENIMADIDRKSRP 694 >gi|167842004|ref|ZP_02468688.1| prolyl-tRNA synthetase [Burkholderia thailandensis MSMB43] Length = 578 Score = 246 bits (627), Expect = 8e-63, Method: Composition-based stats. Identities = 132/235 (56%), Positives = 169/235 (71%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MRASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKQNEFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD E K SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDHESLKESYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y+RIF R+GL+ P+ A++G IGG SHEF V+ADTGE + DF E Sbjct: 181 YVRIFSRIGLEFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPT-SDFAANVE 234 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 71/192 (36%), Positives = 103/192 (53%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +DV N K D P+ K V RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPVIADVRNVKAGDPSPDGKGVLDICRGIEVGHVFQLGTKYSDAMGATFIDESGKTQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE + D KGI+WP+++APF++ L + R+A + +YA Sbjct: 442 VMGCYGIGITRILGAAIEQNFDDKGIVWPEAIAPFEVVLCPMGYDRSDAVREAADTLYAD 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD GE+ G FA +L+G P ++++G + + D K+E + R + Sbjct: 502 LVAAGVDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGRRDAEATLLPA 561 Query: 432 EEVINYASHRFS 443 + + + Sbjct: 562 DSAATAVAEKVR 573 >gi|319408458|emb|CBI82113.1| Threonyl-tRNA synthetase [Bartonella schoenbuchensis R1] Length = 659 Score = 245 bits (626), Expect = 8e-63, Method: Composition-based stats. Identities = 84/445 (18%), Positives = 152/445 (34%), Gaps = 39/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L L+E RD ++ L + S G+ W P G K N+ + +R + Sbjct: 233 KAYLHTLEEAEKRDHRRLGREMDLF--HFQEESPGMIFWHPKGWKMFQNLISYMRRRLDD 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-----MIYGPTHEEVMTDIF 118 E++ P + LW SG + Y + M + D P + IF Sbjct: 291 HKYDEVNAPQVLDKSLWEISGHWGWYKENMFQTTPAADDWDDQCIYALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + + R E G+MR R F DA+ F + + N Sbjct: 351 KHGLKSYRDLPIRLAEFGIVHRYEPSGSLHGLMRVRSFTQDDAHIFCTDEQLADECLNIN 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L + G + I ++ + P S E C + E Sbjct: 411 -DLILSTYADFGFEEISLKFSTRPEKRVGSDELWDH---------CEDIMLSVLKTIEKK 460 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I + SI+ A Y + L D++ + ++ FG Sbjct: 461 SEGRIKT--SILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------ 509 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + D + + +G+M ++ + G +W + Sbjct: 510 --AFYIDKDSEKRQPVMIHRAILGSMERFLGILIENFSGHMPLWLAPQQVVVAPIT---- 563 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + EKI +L +G D E+I + L P+ ++ G + + V Sbjct: 564 --SEANEYAEKITKKLKAIGLSATADLRNEKINYKIREHSLQKVPVILVCGKRESETNSV 621 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + + +S+EEV+ S+ Sbjct: 622 SMRRLGSTDQTVLSIEEVMKQLSNE 646 >gi|281411969|ref|YP_003346048.1| threonyl-tRNA synthetase [Thermotoga naphthophila RKU-10] gi|281373072|gb|ADA66634.1| threonyl-tRNA synthetase [Thermotoga naphthophila RKU-10] Length = 640 Score = 245 bits (626), Expect = 8e-63, Method: Composition-based stats. Identities = 90/443 (20%), Positives = 167/443 (37%), Gaps = 41/443 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E R D L L + +++ G+ +LP G L+ + RE G Sbjct: 229 YLKFLEEAQRRDHRKLGPHLELFM-LNTEYAPGMPFFLPKGVVVLNELMRFSRELHRERG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW SG +D Y + M +++++ P + +++S SY Sbjct: 288 YQEIFTPLIMNEQLWKISGHWDHYAENM-YFIEKDEERYAVKPMNCPGHILVYKSRTVSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F++ R E G+MR R F DA+ F TP+ + + I Sbjct: 347 RDLPLRFFEFGRVHRYERSGVLHGLMRVRSFTQDDAHIFC-TPDQIEEEILGVLDLINTI 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G V T + + + + Sbjct: 406 YGQFGFTYR------------------VELSTMPEDHMGDEAIWEKATTALKNALERAGL 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H + DS+ + + ++ + T+ G Sbjct: 448 SYKVNEGEGAFYGPKIDFH---IRDSIGREWQCATIQLDF--------MMPEKFNVTYIG 496 Query: 305 ADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D K+H V + G++ ++ G W +AP ++++I I + D Sbjct: 497 PDNKEHKAVMIHRAIYGSLERFFGILIEHFAGAFPTW---LAPIQVAVIPI---SEKHND 550 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 EKI R+S+ G VF+D+ E +G + A P +I+G K + K+ ++ R Sbjct: 551 GAEKIAKRISQEGFRVFFDNRRETLGYRIRQAQTQKIPYMIILGDKELESGKISVRTRTG 610 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 +D+ LE + + + + Sbjct: 611 KEIKDVDLEHFVETLRNEVLSRK 633 >gi|302669952|ref|YP_003829912.1| threonyl-tRNA synthetase ThrS [Butyrivibrio proteoclasticus B316] gi|302394425|gb|ADL33330.1| threonyl-tRNA synthetase ThrS [Butyrivibrio proteoclasticus B316] Length = 602 Score = 245 bits (626), Expect = 8e-63, Method: Composition-based stats. Identities = 82/439 (18%), Positives = 154/439 (35%), Gaps = 46/439 (10%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E RD + +L L M G+ + P G + + R+ R G Sbjct: 201 LHQLEEAKARDHRVLGKELELFALM--DEGPGLPFYFPKGLVLKNLLIDYWRKIHVREGY 258 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+S P + + LW +SG +D Y M + +D P + +++S SYR Sbjct: 259 QEISTPIMLTKALWEKSGHWDHYRDNM-YVTSVDDMDYAIKPMNCPGGMLVYKSKPHSYR 317 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 P ++ + R E G+MR+R F DA+ F + + ++ Sbjct: 318 EFPIRCGELGIVHRAEKSGTLHGLMRARCFTQDDAHIFMREDQVLSE-IQGVMRLIDEVY 376 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + G + P S E S + + Sbjct: 377 SKFGFPYEI-ELSTRPENSIGSDE-----------------DWQLATESLKAAVEGMGKP 418 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y D H + DS+ + ++ F ++ + G Sbjct: 419 YKINEGDGAFYGPKLDFH---VKDSIGRTWQCGTIQLD----FQLPQRFD----LEYIGE 467 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DGK+H + G++ ++ + +P ++P ++ ++ + D Sbjct: 468 DGKEHRPIMLHRVVFGSIDRFMGILI---EHYAGKFPVWLSPVQVKVLPVSDK---YLDY 521 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR--- 421 ++I A+L + G DD E++G + A + P +IVG K + V ++ R Sbjct: 522 AKEIMAKLYEEGIRAELDDRDEKLGFKIREARMQKVPYMIIVGEKEKDNRLVSVRQRDAE 581 Query: 422 -LTGIREDMSLEEVINYAS 439 +M + + I+ Sbjct: 582 QDKQEIGEMDMADFIDLLK 600 >gi|260892490|ref|YP_003238587.1| prolyl-tRNA synthetase [Ammonifex degensii KC4] gi|260864631|gb|ACX51737.1| prolyl-tRNA synthetase [Ammonifex degensii KC4] Length = 574 Score = 245 bits (626), Expect = 8e-63, Method: Composition-based stats. Identities = 117/311 (37%), Positives = 174/311 (55%), Gaps = 4/311 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + + +P L+E P +AE+ASH+L+LR G I + + GIY+ LPLG++ L + +I+REE Sbjct: 1 MRLTTWLVPTLREVPAEAEVASHRLLLRAGFIRRVAAGIYTLLPLGKRVLAKIESIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR G E+ +P LQ A+LW SGR++ YG E+ RL DR+ + GPTHEE++T + + Sbjct: 61 MNRAGGQEILMPILQPAELWHRSGRWEVYGPELFRLKDRHGRDFCLGPTHEEMITALVAA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQI K+RDE RPRFG++R REF+MKD YSFD G + SY KM+ + Sbjct: 121 EVRSYKQLPLLLYQIGNKYRDERRPRFGLLRGREFIMKDLYSFDRDWAGLEESYRKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSKDFMDFPIPSENT-- 237 Y R+F R+GL + A++G IGG +SHEF+ LAD GE V+C + E Sbjct: 181 YTRVFTRVGLNFRAVEADTGAIGGSVSHEFMALADAGEAVVVYCPDAACGYAANVEKAES 240 Query: 238 -DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + I +E P +++ L + + + E G + Sbjct: 241 LPSLEEIGEEGPMELVATPGVRSAEEVAAFLGLPVKQIIKTLIYRTEKGLVAALVRGDRE 300 Query: 297 PMSATFKGADG 307 + G Sbjct: 301 VNEVKLQNHLG 311 Score = 170 bits (431), Expect = 4e-40, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 3/197 (1%) Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 + P +D+ D P + +S RGIEVG IF G KYS ++A + Sbjct: 370 LPGRDFPVQNVADIRQVSEGDPCPRCGQPLLSVRGIEVGQIFQLGDKYSRALNAYYLDEK 429 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 G+ + MG YGIG R +AAV+E HD +GIIWP +VAPF++ ++ + + R+ E Sbjct: 430 GEKRPIIMGCYGIGITRTMAAVVEQHHDEEGIIWPLAVAPFQVLVLPVNYEEVPQREVAE 489 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 +IY L + G +V DD E+ G +F ADL+G+PL++ VG + ++ KVE+K R TG Sbjct: 490 EIYNLLREKGIEVLLDDREERPGVKFKDADLVGYPLRITVG-RHAAEGKVELKLRRTGET 548 Query: 427 EDMSLEEVINYASHRFS 443 + +EV+ + Sbjct: 549 WLVDKDEVLEKVAAFLE 565 >gi|134095943|ref|YP_001101018.1| prolyl-tRNA synthetase [Herminiimonas arsenicoxydans] gi|166980129|sp|A4G8R0|SYP_HERAR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|133739846|emb|CAL62897.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) (Global RNA synthesis factor) [Herminiimonas arsenicoxydans] Length = 577 Score = 245 bits (626), Expect = 8e-63, Method: Composition-based stats. Identities = 123/235 (52%), Positives = 161/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G + + V AI+REE Sbjct: 1 MRASRFFISTLKEAPSDAEIVSHKLMMRAGMIKRLGSGIYTYMPIGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR AIE+ +P +Q A+LW E+GR+D G E++R+ DR+ + PT EEV+TD+ RS Sbjct: 61 MNRAHAIELLMPLVQPAELWQETGRWDKMGPELMRVKDRHGREYAIQPTSEEVVTDVVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD EG K SY MF + Sbjct: 121 EIKSYRQLPLNFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDAEGLKRSYQIMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y++IF+R GL+ + A++G IGG SHEF V+ADTGE + D+ E Sbjct: 181 YVKIFNRFGLQFRAVAADNGAIGGSGSHEFHVIADTGEDAIVYCPT-SDYAANME 234 Score = 169 bits (429), Expect = 7e-40, Method: Composition-based stats. Identities = 69/192 (35%), Positives = 107/192 (55%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A D+ N D P+ K V RGIEVGH+F GT YS M AT+ +GK + Sbjct: 385 PEAMVLDLRNVVEGDPSPDGKGVLAIQRGIEVGHVFQLGTAYSEKMKATYLDENGKPQLI 444 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 QMG YGIG R+V A IE + D +GIIWP ++APF++ L + + + +K+Y Sbjct: 445 QMGCYGIGVTRIVGAAIEQNFDDRGIIWPAALAPFEVVLCPMGYDRSESVKTETDKLYEA 504 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD GE+ G+ FA +L+G P ++++G + + + +E K R ++L Sbjct: 505 LLAAGVDVILDDRGERPGAMFADWELIGAPHRIVIGERGLKEGALEYKGRRDADATAVAL 564 Query: 432 EEVINYASHRFS 443 ++++ + R + Sbjct: 565 DDMLAFVQARLA 576 >gi|254419068|ref|ZP_05032792.1| threonyl-tRNA synthetase [Brevundimonas sp. BAL3] gi|196185245|gb|EDX80221.1| threonyl-tRNA synthetase [Brevundimonas sp. BAL3] Length = 642 Score = 245 bits (626), Expect = 8e-63, Method: Composition-based stats. Identities = 73/438 (16%), Positives = 140/438 (31%), Gaps = 39/438 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD + L + + +G+ W P G + A +R + G Sbjct: 232 YLQRLEEAEKRDHRKVGKAMELF--HMQEEGRGMVFWHPKGWILWRVLEAYMRRRLDAAG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + W +SG +D Y M + + P + IF +SY Sbjct: 290 YVEVKTPQVLDRKFWEQSGHWDKYRPNMFVCETVEGETLSLKPMNCPGHVQIFDQGQRSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R E G+MR R F DA+ F + + + + + Sbjct: 350 RELPLRMAEFGACHRYEPSGSLHGLMRVRGFTQDDAHIFCREDQIVEET-AEFIKLARSV 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 LG+++ + + P S EF D + Sbjct: 409 HADLGMETAYISLGTRPENRAGSDEF-----------------WDKAEALMAEAARAAGT 451 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A YA D + D++ ++ + AT+ Sbjct: 452 EPVVTEGDGAFYAPKLDFI---VKDAIGREWTCGTIQLDYVLP--------ERLDATYIA 500 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + +G+ ++ ++ G +W ++ D Sbjct: 501 EDGQKHRPVMLHRAILGSFERFIGIMIENYAGAFPLWLAPTQAVVATIT------SDADD 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + AR G D E++G + + P+ +VG + V I+ + Sbjct: 555 YARDVMARFKAAGLRTEIDLRNEKVGYKVREHSVGKVPVIAVVGRQEAEQGLVAIRRLGS 614 Query: 424 GIREDMSLEEVINYASHR 441 + +++EE I + Sbjct: 615 QAQTVVTVEEAIRILTDE 632 >gi|242373974|ref|ZP_04819548.1| threonyl-tRNA synthetase 1 [Staphylococcus epidermidis M23864:W1] gi|242348328|gb|EES39930.1| threonyl-tRNA synthetase 1 [Staphylococcus epidermidis M23864:W1] Length = 654 Score = 245 bits (626), Expect = 8e-63, Method: Composition-based stats. Identities = 78/445 (17%), Positives = 156/445 (35%), Gaps = 33/445 (7%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD L L T G+ WLP G + I +++ Sbjct: 238 KAHLQMLEERRERDHRKIGKDLELFTN-SQLVGAGLPLWLPNGATIRREIERYIVDKEVS 296 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHI 122 G + P L + DL+ SG +D Y ++M ++ M+ P + I+ + Sbjct: 297 MGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMKLDETEEMVLRPMNCPHHMMIYNNKP 356 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ R E ++ + + + P+ K + ++ Sbjct: 357 HSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQ 416 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDD 241 ++ G + R D + + + D M S D+ Sbjct: 417 EVYEDFGFEDYTFRLS--------------YRDPEDKEKYMDDDEMWNKAESMLKEAVDE 462 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y DV ++ ++ + + +S ++ F ++ T Sbjct: 463 MGLPYVEAIGEAAFYGPKLDV---QVKTAMGKEETLSTAQLD----FLLPERF----ELT 511 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + G+DG+ H + G+ + + + +I +N+ H Sbjct: 512 YIGSDGEQHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPKQVEIIPVNVDIH---- 567 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ L G V DD E++G + A + P Q++VG K V +++V ++ Sbjct: 568 YDYARQLQDELKSQGVRVEIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNEVNVRKY 627 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + +E + +E I + Sbjct: 628 GSEDQESLEKDEFIWNLVDEIRLKK 652 >gi|302342678|ref|YP_003807207.1| prolyl-tRNA synthetase [Desulfarculus baarsii DSM 2075] gi|301639291|gb|ADK84613.1| prolyl-tRNA synthetase [Desulfarculus baarsii DSM 2075] Length = 571 Score = 245 bits (626), Expect = 8e-63, Method: Composition-based stats. Identities = 125/227 (55%), Positives = 163/227 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M S+Y +P L+ENP DAE+ SH+LMLR G+I + + GIY+WLP+G + L V AI+R+E Sbjct: 1 MNFSRYLIPTLKENPSDAEVVSHQLMLRAGLIRKLAGGIYTWLPMGLRVLRKVEAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E+ +P +Q A+LW ESGR+D YG+E+LR DR+D PTHEEV+TD+ R Sbjct: 61 MNAAGAQELLMPGVQPAELWRESGRWDFYGRELLRFVDRHDNEYCLAPTHEEVITDLARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR++P YQIQ KFRDE+RPRFGVMR+REFLMKDAYSFD + + + SY M + Sbjct: 121 EIQSYRDMPLNLYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFDASEDAAAQSYQIMRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 Y+RIF RLGL+ + A+SG IGG SHEF+VLADTGE + Sbjct: 181 YMRIFDRLGLRYGVVEADSGSIGGSFSHEFMVLADTGEDAIVSCPAC 227 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 67/194 (34%), Positives = 103/194 (53%), Gaps = 3/194 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A A +D+ N D P ARGIEVGHIF GTKYS + AT+ DG+ Sbjct: 371 GRDAAGATIADLRNLAAGDPCPSCGAPPTLARGIEVGHIFRLGTKYSKALGATYLDVDGQ 430 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + MG YGIG R+VAA IE +D GI++P ++AP ++++ ++A +A +++ Sbjct: 431 AKTIVMGCYGIGVSRIVAAAIEQGNDEAGIVFPLAIAPVSVAVLPMRAEGP-AMEAAQRL 489 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 + L +G D DD + G +F +DLLG PL+V+VG K + +VE+K R E Sbjct: 490 HDELWALGVDCLLDDRDIRPGVKFKDSDLLGVPLRVVVGPKGLETGEVELKKRTAPQPEM 549 Query: 429 MSLEEVINYASHRF 442 + + + + Sbjct: 550 IPMAQAATIIAKLV 563 >gi|82523876|emb|CAI78599.1| threonyl-tRNA synthetase [uncultured delta proteobacterium] Length = 631 Score = 245 bits (626), Expect = 8e-63, Method: Composition-based stats. Identities = 78/440 (17%), Positives = 160/440 (36%), Gaps = 40/440 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++ + + RD +L L + + + G+ W P G + +E Sbjct: 224 LKEHLNHLEEVKKRDHRKLGKELDLFS-LSEEVGAGMILWHPKGAMFRYLLEDFEIKEHL 282 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G ++ P L ++LW +SG +D Y + M ++ ++++ P + I++SHI Sbjct: 283 KRGYQKVIGPQLLRSELWKKSGHFDHYRENM-YFSEIDNQSYGIKPMNCLAHMLIYKSHI 341 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+LP ++++ R E G++R REF DA+ + + Sbjct: 342 HSYRDLPIRYFELGTVHRHEKSGVLHGLLRVREFTQDDAHILCTPEQLDNE-IKSILDFI 400 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + G K + + P S E + + + ++ Sbjct: 401 KYVMGIFGFKYE-VEISTRPEHSIGSDE-----------------DWERATNALKSALEE 442 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + E A Y D KL D+L + + + F ++ + Sbjct: 443 SGTGYDLNEGDGAFYGPKIDF---KLKDALDRKWQCATIQCD----FTLPERF----ELS 491 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G DG + + +GA+ ++ + G +W I Sbjct: 492 YVGQDGVKYRPVMLHRVILGAIERFVGILIEHYAGAFPVW------LSPVQAVILTVTDR 545 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + + +Y L V D E++G + A L P +I+G K VS+ +V ++ Sbjct: 546 VDEYAQNLYQELIDADIRVEMDIRNEKLGLKVREAQLQKIPYMLIIGDKEVSEKRVTLRC 605 Query: 421 RLTGIREDMSLEEVINYASH 440 R + ++++E+ I Sbjct: 606 RDDKKQSELNIEDFIGLVKK 625 >gi|109897601|ref|YP_660856.1| prolyl-tRNA synthetase [Pseudoalteromonas atlantica T6c] gi|123171506|sp|Q15WD6|SYP_PSEA6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|109699882|gb|ABG39802.1| prolyl-tRNA synthetase [Pseudoalteromonas atlantica T6c] Length = 571 Score = 245 bits (626), Expect = 8e-63, Method: Composition-based stats. Identities = 116/237 (48%), Positives = 164/237 (69%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAE+ SH+LMLR G++ + + G+Y+WLP G + L+ V I+REE Sbjct: 1 MRTSQYLLSTQKETPADAEVISHQLMLRAGLVRKLASGLYTWLPTGLRVLNKVAQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G++E+ +P +Q ADLW ESGR+D YG E+LR+ DR+ + + GPTHEEV+T + ++ Sbjct: 61 MDRAGSLEILMPVVQPADLWQESGRWDEYGPELLRIKDRHYRDFVLGPTHEEVVTALVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQ+Q KFRDE+RPRFGVMR REF MKDAYSF L+ E +Y+ MF + Sbjct: 121 EVSSYKQLPLNVYQVQTKFRDEVRPRFGVMRGREFTMKDAYSFHLSDECLNKTYDDMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y R+F R+ L+ P+ A++G IGG+ SHEF VLAD+GE + + D+ E Sbjct: 181 YCRVFERINLEFRPVIADNGSIGGNASHEFHVLADSGEDDIAF-SNASDYAANIEKA 236 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 66/194 (34%), Positives = 109/194 (56%), Gaps = 3/194 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A +D+ N + D P+ + RGIEVGHIF G+KYS ++ +GK Sbjct: 378 ERDAKEFQEADIRNVQAGDPSPDGQGTLEIKRGIEVGHIFQLGSKYSEALNCGVLDENGK 437 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEK 367 + MG YGIG R+VAA IE +HD GIIWPD++APFK++++ + + E Sbjct: 438 HQVLNMGCYGIGVSRIVAAAIEQNHDKYGIIWPDAIAPFKVAIVPMNMHKSHRIQQVAED 497 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +YA+L G +V +DD E+ G F +L+G P +++G + + + KVE K+R +G ++ Sbjct: 498 LYAQLKAAGVEVLFDDRKERPGVMFNDMELVGVPHTIVIGERNLDEQKVEYKNRRSGEKQ 557 Query: 428 DMSLEEVINYASHR 441 + + ++ + S Sbjct: 558 LIDIPQLAEFVSTL 571 >gi|170287992|ref|YP_001738230.1| threonyl-tRNA synthetase [Thermotoga sp. RQ2] gi|238688803|sp|B1L7W6|SYT_THESQ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|170175495|gb|ACB08547.1| threonyl-tRNA synthetase [Thermotoga sp. RQ2] Length = 640 Score = 245 bits (626), Expect = 8e-63, Method: Composition-based stats. Identities = 90/443 (20%), Positives = 166/443 (37%), Gaps = 41/443 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E R D L L + +++ G+ +LP G L+ + RE G Sbjct: 229 YLKFLEEAQRRDHRKLGPHLELFM-LNTEYAPGMPFFLPKGVVVLNELMKFSRELHRERG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW SG +D Y + M +++++ P + +++S SY Sbjct: 288 YQEIFTPLIMNEQLWKISGHWDHYAENM-YFIEKDEERYAVKPMNCPGHILVYKSRTVSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F++ R E G+MR R F DA+ F TP + + I Sbjct: 347 RDLPLRFFEFGRVHRYERSGVLHGLMRVRSFTQDDAHIFC-TPGQIEEEILGVLDLINTI 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G V T + + + + Sbjct: 406 YSQFGFTYR------------------VELSTMPEDHMGDEAIWEKATTALKNALERAGL 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D H + DS+ + + ++ + T+ G Sbjct: 448 SYKVNEGEGAFYGPKIDFH---IRDSIGREWQCATIQLDF--------MMPEKFNVTYIG 496 Query: 305 ADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D K+H V + G++ ++ G W +AP ++++I I + D Sbjct: 497 PDNKEHRAVMIHRAIYGSLERFFGILIEHFAGAFPTW---LAPIQVAVIPI---SEKHND 550 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 EKI R+S+ G VF+D+ E +G + A P +I+G K + K+ ++ R Sbjct: 551 GAEKIAKRISQEGFRVFFDNRRETLGYRIRQAQTQKIPYMIILGDKELESGKISVRTRTG 610 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 +D+ LE + + + + Sbjct: 611 KEIKDVDLEHFVETLRNEVLSRK 633 >gi|238754780|ref|ZP_04616131.1| Prolyl-tRNA synthetase [Yersinia ruckeri ATCC 29473] gi|238706940|gb|EEP99306.1| Prolyl-tRNA synthetase [Yersinia ruckeri ATCC 29473] Length = 572 Score = 245 bits (626), Expect = 8e-63, Method: Composition-based stats. Identities = 127/235 (54%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GM+ + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMVRKLASGLYTWLPTGIRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EINSYKQLPLNFFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R+GL P+ A++G IGGD SHEF VLAD+GE + D+ E Sbjct: 181 YNRIFSRMGLDFRPVLADTGSIGGDASHEFQVLADSGEDDIVF-STGSDYAANIE 234 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 75/192 (39%), Positives = 114/192 (59%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K + RGIEVGHIF GTKYS M AT +G DG++ + Sbjct: 380 PLPPVADLRNVVEGDISPDGKGTLLIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRNQVM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWPD++APF+++++ + H ++ E++YA Sbjct: 440 AMGCYGIGVSRVVAAAIEQNHDDRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYAT 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G +V DD E+ G FA +L+G P +++G + + +VE K+R TG ++ + Sbjct: 500 LRTKGIEVILDDRKERPGVMFADMELIGVPHNIVIGDRNLDSEEVEYKNRRTGEKQMIKT 559 Query: 432 EEVINYASHRFS 443 E+I + + Sbjct: 560 SEIIEFLLSQIK 571 >gi|300715419|ref|YP_003740222.1| Prolyl-tRNA synthetase [Erwinia billingiae Eb661] gi|299061255|emb|CAX58364.1| Prolyl-tRNA synthetase [Erwinia billingiae Eb661] Length = 572 Score = 245 bits (626), Expect = 8e-63, Method: Composition-based stats. Identities = 121/235 (51%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRFVDRGDRPFVLGPTHEEVVTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNVFQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHASQESLQATYDDMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y + F R+GL ++A++G IGG SHEF VLA +GE V D+ E Sbjct: 181 YSQSFKRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIF-STESDYAANIE 234 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 71/192 (36%), Positives = 111/192 (57%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P D+ N D+ P+ K RGIEVGHIF GTKYS M A+ +G DG++ + Sbjct: 380 PLPRVEDIRNVVEGDASPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKASVQGEDGRNQIL 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYAR 371 MG YGIG R+VAA IE +HD +GIIWP ++APF+++++ + H ++ E++YA+ Sbjct: 440 TMGCYGIGITRIVAASIEQNHDERGIIWPAALAPFQVAILPMNMHKSFRVKELAEELYAQ 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P +++G + + +VE K R G + + Sbjct: 500 LRAKGIDVILDDRKERPGVMFADMELIGVPHTIVIGDRNLDSEEVEYKSRREGEKRMIKT 559 Query: 432 EEVINYASHRFS 443 E++++ + Sbjct: 560 GEILDFLVSEIN 571 >gi|46580942|ref|YP_011750.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough] gi|120601757|ref|YP_966157.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris DP4] gi|81566250|sp|Q728R5|SYT_DESVH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166987320|sp|A1VBB4|SYT_DESVV RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|46450362|gb|AAS97010.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough] gi|120561986|gb|ABM27730.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Desulfovibrio vulgaris DP4] gi|311234632|gb|ADP87486.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris RCH1] Length = 644 Score = 245 bits (626), Expect = 9e-63, Method: Composition-based stats. Identities = 87/436 (19%), Positives = 156/436 (35%), Gaps = 41/436 (9%) Query: 8 LPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L ++E R D +L L + G+ W P G + +R+E + Sbjct: 231 LHRIEEAKRRDHRKLGQQLDLFAFH-EDVAPGMVFWHPKGMLVRTIIEDFLRKEHLKRRY 289 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L +LW +SG YD+Y + M + ++ A P + I+RS I+SYR Sbjct: 290 DIVQGPQLLRRELWEKSGHYDNYRENM-YFTEIDENAYGVKPMNCLAHMLIYRSAIRSYR 348 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP F+++ + R E G++R R+F DA+ + + + Sbjct: 349 DLPKRFFELGVVHRHEKSGVLHGLLRVRQFTQDDAHIICRPDQLEDEIIDVI-------- 400 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 A + ++ V T + S + + + + Sbjct: 401 -----------ALVRDLMNLFGFDYKVAVSTRPEKSIGSDEAWELATNALVKAVERAGIP 449 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 +I E A Y DV L D + + S + F ++ + G Sbjct: 450 YTINEGDGAFYGPKIDVR---LMDCIGREWQCSTIQCD----FTLPERFD----LVYVGQ 498 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H + +G++ V+ + G W V +++ + Sbjct: 499 DGERHRPVMVHRAILGSLERFIGVLIEQYAGAFPAWLAPVQARLLTVT------DAQNEF 552 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E A L+K G V D E++G + A L P ++VG K V V ++ R Sbjct: 553 VESARAALAKAGIRVEADVRNEKLGYKVREAQLEKIPYILVVGDKEVEAGGVNVRLRTGE 612 Query: 425 IREDMSLEEVINYASH 440 SL+EV++ Sbjct: 613 NLGLKSLDEVVSLLES 628 >gi|183597570|ref|ZP_02959063.1| hypothetical protein PROSTU_00851 [Providencia stuartii ATCC 25827] gi|188023065|gb|EDU61105.1| hypothetical protein PROSTU_00851 [Providencia stuartii ATCC 25827] Length = 575 Score = 245 bits (626), Expect = 9e-63, Method: Composition-based stats. Identities = 121/235 (51%), Positives = 161/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SH+LMLR GMI + + G+Y WLP G + L V I+REE Sbjct: 1 MRTSKYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYDWLPTGVRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G+IE+S+P +Q ADLW ESGR++ YG E+LR ADR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MENAGSIEVSLPVVQPADLWQESGRWEQYGPELLRFADRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP +QIQ KFRDE+RPRFG+MRSREF+MKDAYSF + E + +Y+ M+ + Sbjct: 121 EITSYKQLPLNLFQIQTKFRDEVRPRFGIMRSREFIMKDAYSFHTSQESLQETYDAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+G ++A++G IGG SHEF VLA +GE + DF E Sbjct: 181 YSKIFTRIGFDFRAVQADTGSIGGSASHEFQVLAQSGEDDIVF-STGSDFAANIE 234 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 113/190 (59%), Gaps = 3/190 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T D+ N D P+ K + RGIEVGHIF GTKYS M A+ + +G + V MG Sbjct: 383 ETFDLRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSEAMKASVQNEEGHNQIVTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSK 374 YGIG R+VAA IE SHD +GIIWPD++APF ++++ + H ++ EK+YA L Sbjct: 443 CYGIGVTRIVAAAIEQSHDERGIIWPDAIAPFHVAILPMNMHKSYRVKEVAEKLYADLKA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV +DD E+ G FA +L+G P +++G + + +++VE K R + + L+ V Sbjct: 503 QGIDVIFDDRKERPGVMFADMELIGVPYTIVIGDRNLDNNQVEYKARRNDEKALIGLDNV 562 Query: 435 INYASHRFSN 444 +++ + +N Sbjct: 563 VSFLKEKLAN 572 >gi|78222566|ref|YP_384313.1| prolyl-tRNA synthetase [Geobacter metallireducens GS-15] gi|114152198|sp|Q39VY6|SYP_GEOMG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|78193821|gb|ABB31588.1| Prolyl-tRNA synthetase [Geobacter metallireducens GS-15] Length = 570 Score = 245 bits (626), Expect = 9e-63, Method: Composition-based stats. Identities = 127/237 (53%), Positives = 169/237 (71%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+P ++E P DAE+ SHKLMLR GMI + + GIY++LPLG +++ V I+REE Sbjct: 1 MRYSQYFIPTVKETPSDAEVVSHKLMLRAGMIRKLAAGIYNYLPLGLRSIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P++Q A+LW ES R++ YGKE+LR DR D GPTHEEV+TD+ R Sbjct: 61 MNRAGAIELLMPSVQPAELWQESKRWEQYGKELLRFKDRKDAEFCLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQ+Q KFRDE+RPRFG+MR REF+MKDAYSFD++ E + SY+KM+ + Sbjct: 121 EVKSYRQLPLNLYQVQSKFRDEIRPRFGLMRGREFIMKDAYSFDVSSEAADTSYDKMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R GLK + A++G IGG SHEF+VLAD+GE + ++ E Sbjct: 181 YRRIFQRCGLKFRAVEADTGSIGGSSSHEFMVLADSGEDAIVSCTAC-EYAANVEKA 236 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 78/189 (41%), Positives = 108/189 (57%), Gaps = 3/189 (1%) Query: 257 AATSDVHNEKLFDSLPENK---RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 A +D+ N D P + RGIEVGH+F GTKYS + ATF ADGK+ + Sbjct: 376 ALIADIRNVVHGDPCPRCEAGHLEMWRGIEVGHVFKLGTKYSESLRATFLDADGKEQVIF 435 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA IE +HD GII+P +APF + + D AC+++Y L+ Sbjct: 436 MGCYGIGISRTVAACIEQNHDADGIIFPIPIAPFHCIISAVSTKDAEVVAACDELYRALT 495 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 VG +V +DD E+ GS+F ADL+G PL+++VGSK +++ KVE+K R G + L E Sbjct: 496 AVGVEVLFDDRDERPGSKFKDADLIGIPLRIVVGSKNLAEGKVELKSRKGGEVSLLPLAE 555 Query: 434 VINYASHRF 442 + Sbjct: 556 AVETVKGLV 564 >gi|212710377|ref|ZP_03318505.1| hypothetical protein PROVALCAL_01437 [Providencia alcalifaciens DSM 30120] gi|212686959|gb|EEB46487.1| hypothetical protein PROVALCAL_01437 [Providencia alcalifaciens DSM 30120] Length = 572 Score = 245 bits (626), Expect = 9e-63, Method: Composition-based stats. Identities = 124/235 (52%), Positives = 160/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SHKLMLR GMI + + G+Y WLP G + L V I+REE Sbjct: 1 MRTSKYLLSTLKETPADAEVISHKLMLRAGMIRKLASGLYDWLPTGVRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MENAGAIEVSLPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP +QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + E + +Y+ M+ + Sbjct: 121 EITSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQESLQETYDAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+G + A++G IGG+ SHEF VLA +GE V DF E Sbjct: 181 YSKIFTRIGFDFRAVHADTGSIGGNASHEFQVLAQSGEDDVVF-STESDFAANIE 234 Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats. Identities = 72/187 (38%), Positives = 112/187 (59%), Gaps = 3/187 (1%) Query: 261 DVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P+ K + RGIEVGHIF GTKYS M A+ + +G + V MG YG Sbjct: 386 DLRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSEAMKASVQNEEGHNQIVTMGCYG 445 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGC 377 IG R+VAA IE SHD +GIIWPD++APF ++++ + H ++ EK+YA L G Sbjct: 446 IGVTRIVAAAIEQSHDDRGIIWPDAIAPFHVAILPMNMHKSYRVKEVAEKLYADLKAQGI 505 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 DV +DD E+ G FA +L+G P +++G + + ++VE K R + ++ + L+ V+++ Sbjct: 506 DVIFDDRKERPGVMFADMELIGVPYTIVIGDRNLDTNQVEYKSRRSDDKQLVGLDNVVSF 565 Query: 438 ASHRFSN 444 + + Sbjct: 566 LKEKLAK 572 >gi|332523222|ref|ZP_08399474.1| threonine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176] gi|332314486|gb|EGJ27471.1| threonine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176] Length = 648 Score = 245 bits (626), Expect = 9e-63, Method: Composition-based stats. Identities = 74/450 (16%), Positives = 160/450 (35%), Gaps = 36/450 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L L+E RD +L L M++ + +G+ WLP G + I +++ Sbjct: 229 KAYLTRLEEAKERDHRKLGKELDLF--MVNPEVGQGLPFWLPNGATIRRTLERYITDKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P + S D + SG +D Y +M D D + + P + ++++ H Sbjct: 287 ASGYQHVYTPPMASVDFYKTSGHWDHYRDDMFPTMDMGDGEEFVLRPMNCPHHIEVYKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP ++ + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSENTDFD 240 + ++ L R D +T+ + + + + D Sbjct: 407 IDVYEDFNLTDYRFRLS--------------YRDPNDTEKYFDNDEMWEKAQSMLKAALD 452 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++ E A Y D+ ++ +L + +S ++ F ++ Sbjct: 453 EMGVDYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERFD----L 501 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + GADG++H M G+ + I + I ++ Sbjct: 502 KYIGADGEEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQV----TVIPISNEA 557 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ L G D+ E++ + + P Q+IVG K + + V ++ Sbjct: 558 HVDYAWEVAKILRDKGVRADVDERNEKMQYKIRASQTSKIPYQLIVGDKEMEEKSVNVRR 617 Query: 421 RLTGIREDMSLEEVINYASHRF-SNNRPVL 449 + ++E+ + ++PV+ Sbjct: 618 YGSKATHTETIEQFVETILADIARKSKPVV 647 >gi|88860213|ref|ZP_01134852.1| prolyl-tRNA synthetase [Pseudoalteromonas tunicata D2] gi|88818207|gb|EAR28023.1| prolyl-tRNA synthetase [Pseudoalteromonas tunicata D2] Length = 573 Score = 245 bits (626), Expect = 9e-63, Method: Composition-based stats. Identities = 118/237 (49%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAEI SH+LMLR GMI + + G+Y+WLP G + L V AI+R+E Sbjct: 1 MRTSQYILATLKEVPSDAEIISHQLMLRAGMIRRLASGLYTWLPSGLRVLRKVEAIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIEM +P +Q ADLW+ESGR++ +G E+LR+ DR+++ GPTHEEV+T+ R Sbjct: 61 MEKAGAIEMLMPVIQPADLWIESGRWEQFGPELLRIKDRHNREFALGPTHEEVITEFVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ K RDE+RPRFGVMR+REF MKDAYSF L+ E ++Y M + Sbjct: 121 EVSSYKQLPLNLFQIQTKVRDEVRPRFGVMRAREFTMKDAYSFHLSDECLANTYAIMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y +F R+GL+ P+ A++G IGG +SHEF VLA++GE + D+ E Sbjct: 181 YCNVFERIGLEYRPVIADTGSIGGSVSHEFHVLAESGEDAIAF-SSGSDYAANIEKA 236 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 66/187 (35%), Positives = 97/187 (51%), Gaps = 4/187 (2%) Query: 260 SDVHNEKLFD--SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D RGIEVGHIF GTKYS M A GK+ + MG Y Sbjct: 387 ADLRNVVEGDVSPCGNGTLSIKRGIEVGHIFQLGTKYSDAMKAGVLNETGKNQIMTMGCY 446 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKVG 376 GIG R+VAA IE + D KGI+WP ++APF+I+++ + E+IY L G Sbjct: 447 GIGVSRIVAAAIEQNFDAKGIVWPKAIAPFQIAIVPMNMHKSHRIPAVAERIYQELKAAG 506 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V +DD E+ G F +L+G P +++G + + D+ VE K R +G +L+ V+ Sbjct: 507 IEVLFDDRKERPGVMFNDMELIGIPHTLVIGERNLDDNCVEYKSR-SGENAMYNLDTVVA 565 Query: 437 YASHRFS 443 + Sbjct: 566 ELIAKIR 572 >gi|300309711|ref|YP_003773803.1| prolyl-tRNA synthetase [Herbaspirillum seropedicae SmR1] gi|300072496|gb|ADJ61895.1| prolyl-tRNA synthetase [Herbaspirillum seropedicae SmR1] Length = 575 Score = 245 bits (626), Expect = 1e-62, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 160/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G + + V AI+REE Sbjct: 1 MRASRFFISTLKEAPSDAEIVSHKLMMRAGMIKRLGAGIYTYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW E+GR++ G E++R+ DR+ + PT EEV+TD+ RS Sbjct: 61 MNRAGAVELLMPVVQPAELWQETGRWNKMGAELMRVKDRHGRDFAIQPTSEEVVTDVARS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD +G K SY M+ + Sbjct: 121 ELRSYKQLPVNFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDVDGLKKSYQAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y+RIF R GL+ + A++G IGG SHEF V+A TGE + D+ E Sbjct: 181 YVRIFTRFGLEFRAVAADNGAIGGSGSHEFHVVAATGEDALVYCPT-SDYAANME 234 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 107/192 (55%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ K V RGIEVGH+F GT YS M AT+ GK + Sbjct: 383 PEPLVADIRNVVEGDASPDGKGVLAIQRGIEVGHVFQLGTTYSEAMKATYLDEAGKPQPL 442 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE + D +GIIWP S+APF++ L + + + +K+YA+ Sbjct: 443 VMGCYGIGVTRILGAAIEQNFDDRGIIWPTSIAPFEVVLCPMGYDRSEAVKTEIDKLYAQ 502 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 LS+ G DV DD GE+ G+ FA +L+G P +++VG + + D +E + R + L Sbjct: 503 LSEAGVDVVLDDRGERPGAMFADWELIGVPHRIVVGDRGLKDGNIEYQGRRDTEATQVPL 562 Query: 432 EEVINYASHRFS 443 E + + + + Sbjct: 563 AEALAFIQGKLA 574 >gi|126175060|ref|YP_001051209.1| prolyl-tRNA synthetase [Shewanella baltica OS155] gi|166980155|sp|A3D6H7|SYP_SHEB5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|125998265|gb|ABN62340.1| prolyl-tRNA synthetase [Shewanella baltica OS155] Length = 571 Score = 245 bits (626), Expect = 1e-62, Method: Composition-based stats. Identities = 120/237 (50%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YS+LP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSYLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLWVE+GR++ +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPMVQPADLWVETGRWEKFGPELLRFKDRHNRDFVLGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MRSREFLMKDAYSF L + +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGMMRSREFLMKDAYSFHLDVDTMNETYEAMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y I R+GL P+ A++G IGG +SHEF VLA +GE + D+ E Sbjct: 181 YSNILTRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAY-STGSDYAANIEKA 236 Score = 179 bits (455), Expect = 6e-43, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 110/206 (53%), Gaps = 3/206 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPM 298 D I + P A +D+ N + P+ ARGIEVGHIF GT YS M Sbjct: 365 DDKHYFGINWERDLPTAQVADIRNVVEGEPTPDGSGTYAMARGIEVGHIFQLGTNYSKSM 424 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 +AT +GK + MG YG+G R+VAA IE + D +GIIWP+++APF + ++ + Sbjct: 425 NATVLDENGKSQVLLMGCYGVGVSRIVAAAIEQNFDDRGIIWPEAIAPFSVGILPMNMHK 484 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D E++Y L++ G DV DD E+ G FA +L+G P V++G + + E Sbjct: 485 SHRVTDIAEQLYKDLNEAGIDVLLDDRKERPGVMFADMELIGIPHTVVIGDRNIDAGVFE 544 Query: 418 IKHRLTGIREDMSLEEVINYASHRFS 443 K+R TG ++D+ +++++ + Sbjct: 545 YKNRRTGEKQDIPFDQLLDLLKNAVK 570 >gi|325569916|ref|ZP_08145910.1| threonine--tRNA ligase [Enterococcus casseliflavus ATCC 12755] gi|325157039|gb|EGC69207.1| threonine--tRNA ligase [Enterococcus casseliflavus ATCC 12755] Length = 646 Score = 245 bits (626), Expect = 1e-62, Method: Composition-based stats. Identities = 75/441 (17%), Positives = 162/441 (36%), Gaps = 30/441 (6%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 F+ + +E RD +L L + + G+ WLP G + I +++ G Sbjct: 231 FIRLREEAKERDHRKLGKELELFM-LSPEVGAGLPFWLPKGATIRRTIERYIVDKEVSLG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKS 124 + P + + DL+ SG +D Y ++M D D M + P + ++++ I S Sbjct: 290 YQHVYTPIMANVDLYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIHS 349 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR LP ++ + R E ++ + + + P+ K + + + + Sbjct: 350 YRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKEEFKRTLDLMVGV 409 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + R + + F + D++ Sbjct: 410 YEDFNITDYRFRLS-------------YRDPQNKDKYFDDDAMWENAQTMLKAAMDELEL 456 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y DV ++ +L + +S ++ F ++ T+ G Sbjct: 457 DYFEADGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTYVG 505 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG++++ + + G + + + + +P +AP + S+I + + D Sbjct: 506 EDGENNHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQASIIPVSV--EAHSDY 562 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +I RL G V DD E++G + + P Q++VG + V+D+ V I+ + Sbjct: 563 AYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKIPYQIVVGDQEVNDATVNIRRYGSK 622 Query: 425 IREDMSLEEVINYASHRFSNN 445 + L ++ + N Sbjct: 623 ETQVEELNLFVDAMAAEVKNY 643 >gi|306833981|ref|ZP_07467104.1| threonine--tRNA ligase [Streptococcus bovis ATCC 700338] gi|304423847|gb|EFM26990.1| threonine--tRNA ligase [Streptococcus bovis ATCC 700338] Length = 666 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 157/445 (35%), Gaps = 33/445 (7%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y + RD +L L MI + +G+ WLP G + I +++ + Sbjct: 249 YLKQRQEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPDGATIRRTLERYIVDKEVAS 306 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIK 123 G + + P L S DL+ SG +D Y ++M D D + + P + +++ H+ Sbjct: 307 GYLHVYTPPLASVDLYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNCPHHIQVYKHHVH 366 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP +I + R E ++ + + +TPE + + K + Sbjct: 367 SYRELPIRIAEIGMMHRYEKSGALSGLQRVREMSLNDGHLFVTPEQIQEEFQKALQLIID 426 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ L R + + + + D++ Sbjct: 427 VYEDFDLTEYRFRLSLRD-------------PKDTHKYYDDDEMWENAQSMLKAALDEMG 473 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 E A Y D+ ++ +L + +S ++ F ++ T+ Sbjct: 474 VEYFEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLD----FLLPERF----GLTYI 522 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 GADG++H M G+ + I + + I ++ D Sbjct: 523 GADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQV----TVIPVSNEAHVD 578 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L G V D+ E++ + + P Q+IVG K ++D V ++ + Sbjct: 579 YAWEVAKVLRDKGVRVDVDERNEKMQLKIRQSQTKKIPYQLIVGDKEMADKTVNVRRYGS 638 Query: 424 GIREDMSLEEVINYASHRFS-NNRP 447 +++E ++ + +RP Sbjct: 639 KQTHTEAIDEFVDNILADINRKSRP 663 >gi|290475547|ref|YP_003468435.1| threonine tRNA synthetase [Xenorhabdus bovienii SS-2004] gi|289174868|emb|CBJ81669.1| threonine tRNA synthetase [Xenorhabdus bovienii SS-2004] Length = 642 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 67/447 (14%), Positives = 144/447 (32%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ +L L+E RD +L L + + + G+ W G + R + Sbjct: 227 KQLNAYLQRLEEASKRDHRKIGKQLDLY--HMQEEAPGMAFWHNDGWTIFRELETFARVK 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 E+ P + LW ++G +++Y + M ++ P + IF Sbjct: 285 LKEYHYQEVKGPFMMDRILWEKTGHWENYKEHMFT-TSSENREYCVKPMNCPGHVQIFNQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F + + + Sbjct: 344 GLKSYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQIHQE-VSNCIK 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 +++ G + + ++ + P ++ D Sbjct: 403 MIYDVYNTFGFEKVVVKLSTRPEKR-----------------IGTEKQWDEAEADLAEAL 445 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 A Y + L+D L + ++ F + ++ Sbjct: 446 KQSGIEFEYQPGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPAR----LN 494 Query: 300 ATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A++ G + + V + +G++ ++ + G W +++ Sbjct: 495 ASYVGENNERKVPVMIHRAVLGSLERFIGILTEEYAGFFPTWLAPQQVVVMNIT------ 548 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 +++ +L G D E+IG + L P ++ G K V K + Sbjct: 549 DGQAGYVQELVKKLQDAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKTSV 608 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R +++ E I + Sbjct: 609 RTRRGKDLGSINVSEFIEKLLTEIRSR 635 >gi|238026159|ref|YP_002910390.1| prolyl-tRNA synthetase [Burkholderia glumae BGR1] gi|237875353|gb|ACR27686.1| Prolyl-tRNA synthetase [Burkholderia glumae BGR1] Length = 578 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 130/235 (55%), Positives = 169/235 (71%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRIAGGIYNYLPIGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD G K SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDQAGLKESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y+R+F R+GL+ + A++G IGG SHEF V+ADTGE + DF E Sbjct: 181 YVRVFTRIGLEFRAVAADNGSIGGSGSHEFHVIADTGEDAIAYCPT-SDFAANVE 234 Score = 173 bits (438), Expect = 6e-41, Method: Composition-based stats. Identities = 69/192 (35%), Positives = 105/192 (54%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K V RGIEVGH+F GTKYS + ATF GK + Sbjct: 382 PEPVVADLRNVKKGDPSPDGKGVIDICRGIEVGHVFQLGTKYSKALGATFLDEGGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 +MG YGIG R++ A IE + D +GIIWP+++APF++ L + ++ R+ +++YA Sbjct: 442 EMGCYGIGVTRILGAAIEQNFDDRGIIWPEAIAPFEVVLCPMGYDRSELVRETADQLYAA 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 LS G DV DD GE+ G FA +L+G P ++++G + + D K+E + R + Sbjct: 502 LSAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGRRDTEATLLPA 561 Query: 432 EEVINYASHRFS 443 + Sbjct: 562 DGAAATVIETVR 573 >gi|325295461|ref|YP_004281975.1| threonyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065909|gb|ADY73916.1| threonyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 658 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 79/464 (17%), Positives = 159/464 (34%), Gaps = 60/464 (12%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD + +L L + + G+ W P G + + +E + Sbjct: 231 EYLHRLEEAKKRDHRVLGKQLDLFSIY-EEAGSGLVFWHPNGAIIRREIEEWVEKEHEKR 289 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEM-------LRLADRNDKA-------------- 103 G + P + ADLW SG YD Y + M ++ Sbjct: 290 GYQRIYTPHIMKADLWKISGHYDFYKENMFFVPVVEHDEEEKLGNEKVPLTCEEVERANW 349 Query: 104 MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYS 162 P + I++S +SY++LP F++ R E G++R R F D + Sbjct: 350 YAVKPMNCPGHILIYKSQPRSYKDLPLRFFEFGTVHRYEKSGSLHGLLRVRGFTQDDGHI 409 Query: 163 FDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 F + LG+ M S ++++ T + Sbjct: 410 FCRPDQLKDEI--------------LGVLDYVMELLSV-----FKLDYVINIGTKPEKYI 450 Query: 223 CSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 S + + + + +IVE A Y D+ + D++ + Sbjct: 451 GSDEAWEHATQALIDALKERGLEYNIVEGDGAFYGPKIDI---AVLDAIGRKWDGPTIQV 507 Query: 283 EVGHIFYFGTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 + F ++ T+ DG+ + +G++ ++ + ++P Sbjct: 508 D----FNLPERFD----LTYVDRDGEKKRPVMVHRAIMGSIERFIGLLI---EHYAGLFP 556 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 +AP ++ +I + + E ++ +L +VG DD ++G + A+LL P Sbjct: 557 LWLAPTQVVVIPVSDK---YINYAENVFRKLKEVGIRAKLDDESGKVGYKIRKAELLKIP 613 Query: 402 LQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 VIVG K + V ++ + G M + ++ Sbjct: 614 YMVIVGEKEQESNTVSVRSKKEGDLGSMEISNFLDKILTEIKEK 657 >gi|299065636|emb|CBJ36808.1| Proline--tRNA ligase [Ralstonia solanacearum CMR15] Length = 574 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 119/235 (50%), Positives = 164/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + G+Y+++P+G + + V I+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGLYTYMPVGLRVIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N +GA+E+ +P +Q A+LW E+GR+D G EM+R+ DR+++ ++ PT EEV+TDI R+ Sbjct: 61 MNASGAVEVLMPVVQPAELWQETGRWDKMGDEMMRVKDRHERDLVIQPTSEEVVTDIART 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ +P FYQIQ KFRDE RPRFG+MR REF MKDAYSFD EG K SY KM+ + Sbjct: 121 EIRSYKQMPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDAEGLKVSYEKMYGA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R GL+ + A++G IGG SHEF V+ADTGE + D+ E Sbjct: 181 YTRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIADTGEDAIVY-SPDSDYAANIE 234 Score = 159 bits (402), Expect = 9e-37, Method: Composition-based stats. Identities = 68/172 (39%), Positives = 102/172 (59%), Gaps = 3/172 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A D+ N D P+ K RGIEVGH+F GT+YS MSATF +GK + Sbjct: 382 PEAEVYDLRNVVAGDPSPDGKGTLALCRGIEVGHVFMLGTRYSESMSATFLDENGKTQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE ++D +GIIWP S+APF++ + + + R ++++A Sbjct: 442 MMGCYGIGITRILGAAIEQNYDARGIIWPVSIAPFEVVICPVGYDRSEAVRAEADRLHAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 L+ G DV DD GE+ G+ FA +L+G P +V+VG + + + K+E++ R Sbjct: 502 LAAAGIDVILDDRGERPGAMFADWELIGVPFRVVVGERGLKEGKLELQGRRD 553 >gi|330994118|ref|ZP_08318046.1| Threonyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1] gi|329758585|gb|EGG75101.1| Threonyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1] Length = 644 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 81/436 (18%), Positives = 146/436 (33%), Gaps = 41/436 (9%) Query: 8 LPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E R D ++ L I + + G W P G + + +R Q+R G Sbjct: 233 LHQLEEAERRDHRRIGREMDLF--HIQEEAVGQIFWHPKGWRLYSVLQDYMRRAQDRNGY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L LW SG +D Y + M + DK + P + IFR ++SY Sbjct: 291 QEVRTPQLVDRALWEASGHWDKYREHMFIATVEDEDKTLALKPMNCPCHVQIFRHGLRSY 350 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R E G+MR R F DA+ F + + + + + Sbjct: 351 RELPLRMAEFGACHRYEPSGALHGIMRVRGFTQDDAHIFCTEDQIADETARFVRMLADVY 410 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 A+ Q D + D Sbjct: 411 QDLGFEHFRVKFADRPE------------------QRAGDDATWDRAENALKVACDMAGV 452 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D++ + + ++ + A++ G Sbjct: 453 TYEHNPGEGAFYGPKLEF---VLRDAIGRDWQCGTLQVDYVLP--------ERLDASYVG 501 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D H + +G+ ++ H G+ +W V S++ D Sbjct: 502 EDSARHRPVMLHRAILGSFERFLGILIEQHAGRFPLWLAPVQVVVASIVT------DAAD 555 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ RL G V D E+I ++ L P+ ++VG K ++ V ++ Sbjct: 556 YAQQVADRLRAAGLVVEADLRNEKINAKIREHSLARVPVILVVGRKEAEENTVAMRRLGG 615 Query: 424 GIREDMSLEEVINYAS 439 +E + L+E ++ + Sbjct: 616 KAQEVLPLDEAVSALA 631 >gi|123443459|ref|YP_001007432.1| prolyl-tRNA synthetase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332160618|ref|YP_004297195.1| prolyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|152112962|sp|A1JP53|SYP_YERE8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|122090420|emb|CAL13288.1| prolyl-tRNA synthetase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318606904|emb|CBY28402.1| prolyl-tRNA synthetase; Bacterial type [Yersinia enterocolitica subsp. palearctica Y11] gi|325664848|gb|ADZ41492.1| prolyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860908|emb|CBX71188.1| prolyl-tRNA synthetase [Yersinia enterocolitica W22703] Length = 572 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 124/235 (52%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EINSYKQLPLNFFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+ L + A++G IGG SHEF VLAD+GE + D+ E Sbjct: 181 YSKIFERMDLNFRAVLADTGSIGGSASHEFQVLADSGEDDIVF-STESDYAANIE 234 Score = 176 bits (445), Expect = 9e-42, Method: Composition-based stats. Identities = 75/192 (39%), Positives = 112/192 (58%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF GTKYS M AT +G DG++ + Sbjct: 380 PLPQVADLRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRNQVM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWPD++APF+++++ + H + E++YA Sbjct: 440 TMGCYGIGVSRVVAAAIEQNHDERGIIWPDAIAPFQVAILPMNMHKSFRVQALAEELYAT 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P +++G + + +VE K+R G ++ + Sbjct: 500 LRSHGIDVILDDRKERPGVMFADMELIGVPHNIVIGDRNLDSEEVEYKNRRAGEKQMIKT 559 Query: 432 EEVINYASHRFS 443 E+I++ + Sbjct: 560 SEIIDFLLSQIK 571 >gi|326386620|ref|ZP_08208242.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Novosphingobium nitrogenifigens DSM 19370] gi|326208935|gb|EGD59730.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Novosphingobium nitrogenifigens DSM 19370] Length = 663 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 83/450 (18%), Positives = 143/450 (31%), Gaps = 48/450 (10%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD ++ L + + G W P G + + A +R + G Sbjct: 240 LTRLEEAAKRDHRKLGQEMDLF--HLQAEAHGSVFWHPKGYRIWRELEAYMRRAIDGAGY 297 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK-------------AMIYGPTHEEV 113 E+ P + A W SG + Y + M + D M P + Sbjct: 298 REVKTPQVMDARQWEASGHWGKYRENMFVIPDEVPNVEDEGPLVSDDAAWMALKPMNCPA 357 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IFR IKSYR LP FY+ R+E G+MR R+F DA+ F + + Sbjct: 358 HVLIFRQGIKSYRELPLRFYENGCCHRNEPHGALHGLMRVRQFTQDDAHIFCREDQIVEE 417 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 RI+ G + P S E D E ++ + Sbjct: 418 -VRAFCELADRIYKDFGFTYAI-KLALRPEKRFGSDEMW---DQAEAELRNAVAAAGLAT 472 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 P + A YA + H L D++ +V + Sbjct: 473 PEYG---------WEELPGEGAFYAPKLEWH---LTDAIGRTWQVGTIQSDRVLP----- 515 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + A++ G DG+ H + G+ ++ GK +W V ++ Sbjct: 516 ---ERLDASYIGEDGERHRPVMLHRAIFGSYERFIGILIEHFAGKLPVWLAPVQAVVATI 572 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + ++ L+ G V D E+I + L P ++VG + Sbjct: 573 V------SDADGYAQETVQTLAAAGIRVEADTRNEKINYKVREHSLQKVPFLLVVGKREA 626 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHR 441 + V ++ ++ + L E I Sbjct: 627 EEGTVAVRRLGEQQQKVLPLAEAIALIKGE 656 >gi|223044090|ref|ZP_03614129.1| threonyl-tRNA synthetase [Staphylococcus capitis SK14] gi|222442484|gb|EEE48590.1| threonyl-tRNA synthetase [Staphylococcus capitis SK14] Length = 645 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 79/445 (17%), Positives = 155/445 (34%), Gaps = 33/445 (7%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD L L T G+ WLP G + I +++ Sbjct: 229 KAHLQMLEERRERDHRKIGKDLELFTN-SQLVGAGLPLWLPNGATIRREIERYIVDKEVS 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHI 122 G + P L + DL+ SG +D Y +M ++ M+ P + I+ + Sbjct: 288 MGYDHVYTPVLANVDLYKTSGHWDHYQDDMFPPMKLDETEEMVLRPMNCPHHMMIYNNKP 347 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ R E ++ + + + P+ K + ++ Sbjct: 348 HSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQ 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDD 241 ++ G K R D + + + D M S D+ Sbjct: 408 EVYEDFGFKDYTFRLS--------------YRDPEDKEKYMDDDEMWNKAESMLKEAVDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y DV ++ ++ + + +S ++ F ++ T Sbjct: 454 MGLPYVEAIGEAAFYGPKLDV---QVKTAMGKEETLSTAQLD----FLLPERF----ELT 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + G+DG+ H + G+ + + + +I +N+ H Sbjct: 503 YIGSDGEQHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPKQVEIIPVNVDLH---- 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ L G V DD E++G + A + P Q++VG K V +++V ++ Sbjct: 559 YDYARQLQDELKSQGVRVEIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNEVNVRQY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + +E + +E I + Sbjct: 619 GSQDQETLEKDEFIWNLVDEIRLKK 643 >gi|170699968|ref|ZP_02890995.1| prolyl-tRNA synthetase [Burkholderia ambifaria IOP40-10] gi|170135116|gb|EDT03417.1| prolyl-tRNA synthetase [Burkholderia ambifaria IOP40-10] Length = 578 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 139/288 (48%), Positives = 183/288 (63%), Gaps = 5/288 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD G SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDTAGLNESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y+RIF RLGL+ + A+SG IGG+ SHEF V+ADTGE + DF E + Sbjct: 181 YVRIFTRLGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYCPT-SDFAANIEAAEAL 239 Query: 240 ---DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 + + +E+ P A + E L L + E Sbjct: 240 PLIAERAAPAEAMEKVATPGKAKCEAVAELLAIPLERTIKSIVLATEN 287 Score = 176 bits (445), Expect = 8e-42, Method: Composition-based stats. Identities = 70/189 (37%), Positives = 105/189 (55%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +DV + K D P+ K RGIEVGH+F GTKYS M ATF GK + MG Sbjct: 385 EVADVRDVKKGDPSPDGKGTIDICRGIEVGHVFQLGTKYSEAMGATFLDESGKPQPMLMG 444 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSK 374 YG+G R++ A IE + D KGIIWP+S+APF++ L + + R+A +K+YA L+ Sbjct: 445 CYGVGVTRILGAAIEQNFDDKGIIWPESIAPFEVVLCPMGYDRSDMVREAADKLYAELAA 504 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV DD GE+ G FA +L+G P ++++G + + + K+E + R + +E Sbjct: 505 AGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKEGKIEYQGRRDAEATLLPADEA 564 Query: 435 INYASHRFS 443 + + Sbjct: 565 AATVTEKIR 573 >gi|217972680|ref|YP_002357431.1| prolyl-tRNA synthetase [Shewanella baltica OS223] gi|254782915|sp|B8EDD0|SYP_SHEB2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|217497815|gb|ACK46008.1| prolyl-tRNA synthetase [Shewanella baltica OS223] Length = 571 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 120/237 (50%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YS+LP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSYLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLWVE+GR++ +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPMVQPADLWVETGRWEKFGPELLRFKDRHNRDFVLGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MRSREFLMKDAYSF L + +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGMMRSREFLMKDAYSFHLDVDTMNETYEAMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y I R+GL P+ A++G IGG +SHEF VLA +GE + D+ E Sbjct: 181 YSNILTRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAY-STGSDYAANIEKA 236 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 111/206 (53%), Gaps = 3/206 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPM 298 D I + P A +D+ N + P+ ARGIEVGHIF GT YS M Sbjct: 365 DDKHYFGINWERDLPTAQVADIRNVVEGEPTPDGSGTYAMARGIEVGHIFQLGTNYSKSM 424 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 +AT +GK + MG YG+G R+VAA IE + D +GIIWP+++APF + ++ + Sbjct: 425 NATVLDENGKSQVLLMGCYGVGVSRIVAAAIEQNFDDRGIIWPEAIAPFSVGILPMNMHK 484 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D E++Y L++ G DV DD E+ G FA +L+G P V++G + + E Sbjct: 485 SHRVTDIAEQLYKDLNEAGIDVLLDDRKERPGVMFADMELIGIPHTVVIGDRNIDAGVFE 544 Query: 418 IKHRLTGIREDMSLEEVINYASHRFS 443 K+R TG ++D+ ++++++ + Sbjct: 545 YKNRRTGEKQDIPFDQLLDFLKNAVK 570 >gi|171316236|ref|ZP_02905459.1| prolyl-tRNA synthetase [Burkholderia ambifaria MEX-5] gi|171098650|gb|EDT43447.1| prolyl-tRNA synthetase [Burkholderia ambifaria MEX-5] Length = 578 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 139/288 (48%), Positives = 183/288 (63%), Gaps = 5/288 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD G SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDTAGLNESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y+RIF RLGL+ + A+SG IGG+ SHEF V+ADTGE + DF E + Sbjct: 181 YVRIFTRLGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYCPT-SDFAANIEAAEAL 239 Query: 240 ---DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 + + +E+ P A + E L L + E Sbjct: 240 PLIAERAAPAEAMEKVATPGKAKCEAVAELLAIPLERTIKSIVLATEN 287 Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 106/192 (55%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +DV + K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPEVADVRDVKKGDPSPDGKGTIDICRGIEVGHVFQLGTKYSEAMGATFLDESGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YG+G R++ A IE + D +GIIWP+S+APF++ L + + R+A +K+YA Sbjct: 442 LMGCYGVGVTRILGAAIEQNFDDRGIIWPESIAPFEVVLCPMGYDRSDMVREAADKLYAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G DV DD GE+ G FA +L+G P ++++G + + + K+E + R + Sbjct: 502 LTAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKEGKIEYQGRRDAEATLLPA 561 Query: 432 EEVINYASHRFS 443 +E + + Sbjct: 562 DEAAATVTEKIR 573 >gi|332993607|gb|AEF03662.1| threonyl-tRNA synthetase [Alteromonas sp. SN2] Length = 638 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 78/447 (17%), Positives = 143/447 (31%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E RD L L + + G+ W G + +RE+ Sbjct: 227 KQLKAYLQRLEEAEKRDHRKIGKALNLF--HWQEEAPGMVFWHNDGWSIYTELEKFVREK 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 E+ P + LW +SG ++ Y + M + + P + IF Sbjct: 285 LRDYTYDEVKGPLMMDRSLWEKSGHWEKYAENMFT-TESEKREYAIKPMNCPGHVQIFNQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F + + + Sbjct: 344 GLKSYRDLPLRMAEFGCCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQILEE-VSGCIK 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + G + ++ + P S E D + Sbjct: 403 MVYETYAAFGFDKVAVKLSTRPEKRVGSDE-----------------IWDKSEAALAEAL 445 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 A Y + L D L + ++ G+ Sbjct: 446 KANDIEFEYQPGEGAFYGPKIEF---TLHDCLNRAWQCGTVQLDFSMPGRLGS------- 495 Query: 300 ATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 T+ DG+ V + +G++ ++ G +W +++ Sbjct: 496 -TYVAEDGERKVPVMIHRAILGSLERFIGILTEEFAGFFPLWLAPQQVVILNIT------ 548 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + ++ +L K G D E+IG + L P ++VG K + +V + Sbjct: 549 DSQGEYAQECVKKLQKSGFRAKSDLRNEKIGFKIREHTLKRVPYMLVVGDKEMEAGEVAV 608 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R MSLE I A+ + Sbjct: 609 RSRSGDDLGKMSLESFIAMANQEVAEK 635 >gi|332292754|ref|YP_004431363.1| threonyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5] gi|332170840|gb|AEE20095.1| threonyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5] Length = 648 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 77/448 (17%), Positives = 153/448 (34%), Gaps = 40/448 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y I + RD +L L T + +G+ WLP G + + ++ Q Sbjct: 228 LKEYLELIEEAKKRDHRKLGKELELFT-FSQRVGQGLPLWLPKGAALRERLENFLKAAQK 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRS 120 + G + P + +L+ SG Y+ YG + + + + P + +I+ S Sbjct: 287 KQGYEMVVSPHIGQKELYETSGHYEKYGADSFQPILTPNEGEEFLLKPMNCPHHCEIYNS 346 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 SY+ LP F + +R E G+ R R F DA+ F TP+ + K+ Sbjct: 347 RPWSYKELPKRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFC-TPDQLDEEFMKVID 405 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L +F LG ++ + D + + + D + + Sbjct: 406 LVLYVFGSLGFENFTAQVSLR--------------DPEKPEKYIGADENWVKAENAILNA 451 Query: 240 DDIISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTKYSL 296 LN +VE A Y D + D+L + ++ ++ F K S Sbjct: 452 AKAKGLNYVVETGEAAFYGPKLDFM---VKDALGRSWQLGTIQVDYNLPERFELQYKGSD 508 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 V + G+M A++ G +W ++L Sbjct: 509 NEM---------HRPVMIHRAPFGSMERFIAILLEHTGGNFPLWLMPQQATILTL----- 554 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + + L D+ GE +G + A++ P +I+G + +D + Sbjct: 555 -SEKYEKYAQNVLTLLENHEIRAIIDNRGETMGKKIREAEMQKLPFMIIIGEQEENDGTI 613 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSN 444 ++ M+++ + ++ Sbjct: 614 SVRRHGGEDLGSMTIDAFAKMVNAEIAS 641 >gi|153001389|ref|YP_001367070.1| prolyl-tRNA synthetase [Shewanella baltica OS185] gi|166980156|sp|A6WQB8|SYP_SHEB8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|151366007|gb|ABS09007.1| prolyl-tRNA synthetase [Shewanella baltica OS185] Length = 571 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 120/237 (50%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YS+LP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSYLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLWVE+GR++ +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPMVQPADLWVETGRWEKFGPELLRFKDRHNRDFVLGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MRSREFLMKDAYSF L + +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGMMRSREFLMKDAYSFHLDVDTMNETYEAMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y I R+GL P+ A++G IGG +SHEF VLA +GE + D+ E Sbjct: 181 YSNILTRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAY-STGSDYAANIEKA 236 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 111/206 (53%), Gaps = 3/206 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPM 298 D I + P A +D+ N + P+ ARGIEVGHIF GT YS M Sbjct: 365 DDKHYFGINWERDLPTAQVADIRNVVEGEPTPDGLGTYAMARGIEVGHIFQLGTNYSKSM 424 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 +AT +GK + MG YG+G R+VAA IE + D +GIIWP+++APF + ++ + Sbjct: 425 NATVLDENGKSQVLLMGCYGVGVSRIVAAAIEQNFDDRGIIWPEAIAPFSVGILPMNMHK 484 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D E++Y L++ G DV DD E+ G FA +L+G P V++G + + E Sbjct: 485 SHRVTDIAEQLYKDLNEAGIDVLLDDRKERPGVMFADMELIGIPHTVVIGDRNIDAGVFE 544 Query: 418 IKHRLTGIREDMSLEEVINYASHRFS 443 K+R TG ++D+ ++++++ + Sbjct: 545 YKNRRTGEKQDIPFDQLLDFLKNAVK 570 >gi|117919846|ref|YP_869038.1| prolyl-tRNA synthetase [Shewanella sp. ANA-3] gi|152016600|sp|A0KV13|SYP_SHESA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|117612178|gb|ABK47632.1| prolyl-tRNA synthetase [Shewanella sp. ANA-3] Length = 570 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 122/237 (51%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YS+LP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSYLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLWVE+GR+D +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPMVQPADLWVETGRWDKFGPELLRFKDRHNRDFVLGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREFLMKDAYSF L + +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHLDVDTMNETYEAMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y I R+GL P+ A++G IGG +SHEF VLA +GE + D+ E Sbjct: 181 YSNILSRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAY-STGSDYAANIEKA 236 Score = 179 bits (455), Expect = 6e-43, Method: Composition-based stats. Identities = 71/204 (34%), Positives = 111/204 (54%), Gaps = 3/204 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPM 298 D I + P A +D+ N + P+ ARGIEVGHIF GT YS M Sbjct: 365 DDKHYFGINWERDLPLAQAADIRNVVEGEPTPDGLGTYAMARGIEVGHIFQLGTNYSKSM 424 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 +AT +GK + MG YG+G R+VAA IE + D +GI+WP+++APF + ++ + Sbjct: 425 NATVLDENGKSQVLLMGCYGVGVSRIVAAAIEQNFDDRGIVWPEAIAPFSVGILPMNMHK 484 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D E++Y LS VG DV DD E+ G FA +L+G P V++G + + E Sbjct: 485 SHRVTDIAEQLYKDLSAVGIDVLLDDRKERPGVMFADMELIGIPHTVVIGDRNIDAGVFE 544 Query: 418 IKHRLTGIREDMSLEEVINYASHR 441 K+R TG ++D+ ++++++ + Sbjct: 545 YKNRRTGEKQDVPFDQIVDFLKNL 568 >gi|114046916|ref|YP_737466.1| prolyl-tRNA synthetase [Shewanella sp. MR-7] gi|122944801|sp|Q0HWU6|SYP_SHESR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|113888358|gb|ABI42409.1| prolyl-tRNA synthetase [Shewanella sp. MR-7] Length = 570 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 122/237 (51%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YS+LP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSYLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLWVE+GR+D +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPMVQPADLWVETGRWDKFGPELLRFKDRHNRDFVLGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREFLMKDAYSF L + +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHLDVDTMNETYEAMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y I R+GL P+ A++G IGG +SHEF VLA +GE + D+ E Sbjct: 181 YSNILSRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAY-STGSDYAANIEKA 236 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 70/204 (34%), Positives = 110/204 (53%), Gaps = 3/204 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPM 298 D I + P A +D+ N + P+ ARGIEVGHIF GT YS M Sbjct: 365 DDKHYFGINWERDLPLAQAADIRNVVEGEPTPDGLGTYAMARGIEVGHIFQLGTNYSKSM 424 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 +AT +GK + MG YG+G R+VAA IE + D +GI+WP+++APF + ++ + Sbjct: 425 NATVLDENGKSQVLLMGCYGVGVSRIVAAAIEQNFDDRGIVWPEAIAPFSVGILPMNMHK 484 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D E++Y LS G DV DD E+ G FA +L+G P V++G + + E Sbjct: 485 SHRVTDIAEQLYKDLSAAGIDVLLDDRKERPGVMFADMELIGIPHTVVIGDRNIDAGVFE 544 Query: 418 IKHRLTGIREDMSLEEVINYASHR 441 K+R TG ++D+ ++++++ + Sbjct: 545 YKNRRTGEKQDVPFDQIVDFLKNL 568 >gi|113969687|ref|YP_733480.1| prolyl-tRNA synthetase [Shewanella sp. MR-4] gi|123130574|sp|Q0HKJ4|SYP_SHESM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|113884371|gb|ABI38423.1| prolyl-tRNA synthetase [Shewanella sp. MR-4] Length = 570 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 122/237 (51%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YS+LP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSYLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLWVE+GR+D +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPMVQPADLWVETGRWDKFGPELLRFKDRHNRDFVLGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREFLMKDAYSF L + +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHLDVDTMNETYEAMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y I R+GL P+ A++G IGG +SHEF VLA +GE + D+ E Sbjct: 181 YSNILSRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAY-STGSDYAANIEKA 236 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 70/204 (34%), Positives = 110/204 (53%), Gaps = 3/204 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPM 298 D I + P A +D+ N + P+ ARGIEVGHIF GT YS M Sbjct: 365 DDKHYFGINWERDLPLAQAADIRNVVEGEPTPDGLGTYAMARGIEVGHIFQLGTNYSKSM 424 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 +AT +GK + MG YG+G R+VAA IE + D +GI+WP+++APF + ++ + Sbjct: 425 NATVLDENGKSQVLLMGCYGVGVSRIVAAAIEQNFDDRGIVWPEAIAPFSVGILPMNMHK 484 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D E++Y LS G DV DD E+ G FA +L+G P V++G + + E Sbjct: 485 SHRVTDIAEQLYKDLSAAGIDVLLDDRKERPGVMFADMELIGIPHTVVIGDRNIDAGVFE 544 Query: 418 IKHRLTGIREDMSLEEVINYASHR 441 K+R TG ++D+ ++++++ + Sbjct: 545 YKNRRTGEKQDVPFDQIVDFLKNL 568 >gi|91793895|ref|YP_563546.1| prolyl-tRNA synthetase [Shewanella denitrificans OS217] gi|123060765|sp|Q12L53|SYP_SHEDO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|91715897|gb|ABE55823.1| prolyl-tRNA synthetase [Shewanella denitrificans OS217] Length = 571 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 123/237 (51%), Positives = 164/237 (69%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YSWLP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSWLPSGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLW+E+GR++ +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPLVQPADLWIETGRWEKFGPELLRFQDRHNRDFVLGPTHEEVITDLVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP + YQIQ KFRDE+RPRFGVMR+REFLMKDAYSF L +Y MF + Sbjct: 121 EVSSYKQLPLSLYQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHLDQGTMDETYQAMFTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF R+GL P+ A++G IGG LSHEF VLA++GE + D+ E Sbjct: 181 YNNIFTRMGLAFRPVLADTGSIGGSLSHEFHVLANSGEDLIAY-STGSDYAANIEKA 236 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 68/192 (35%), Positives = 108/192 (56%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N ++ P+ ARGIEVGHIF GT YS M+AT +GK + Sbjct: 379 PLATAADIRNVVEGEATPDGLGTYAMARGIEVGHIFQLGTNYSKAMNATVLDENGKSQVM 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYAR 371 MG YG+G R+VAA IE +HD +GI+ P+++APF + ++ + D EK+Y Sbjct: 439 LMGCYGVGVSRIVAAAIEQNHDDRGIMLPEALAPFTVGILPMNMHKSHRVADIAEKLYQD 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G +V DD E+ G FA +L+G P V++G + + E K+R TG ++D+ L Sbjct: 499 LNDAGIEVLLDDRKERPGVMFADMELIGLPHVVVIGDRNIDAGVFEYKNRRTGEKQDIPL 558 Query: 432 EEVINYASHRFS 443 ++++++ Sbjct: 559 DQIVDFLKSSLK 570 >gi|110834994|ref|YP_693853.1| threonyl-tRNA synthetase [Alcanivorax borkumensis SK2] gi|110648105|emb|CAL17581.1| Threonyl-tRNA synthetase [Alcanivorax borkumensis SK2] Length = 638 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 84/447 (18%), Positives = 156/447 (34%), Gaps = 42/447 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L L+E RD + ++ L I Q + G W P G + N+ IR + + Sbjct: 231 NAYLKQLEEAEKRDHRKLAKEMGLF--HIQQEAVGSMFWHPKGWRMRKNLENYIRGKMEK 288 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+S P + LW +SG +D YG++M + + K M P + IF+ I Sbjct: 289 GGYEEVSTPQMMDRILWEQSGHWDKYGEDMFTVCTHDHKEMAVKPMNCPGHVQIFKQGIT 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + FR+E G+MR+R F DA+ F T E Sbjct: 349 SYRDLPIRLGEFTTLFRNEAHGALHGLMRARSFSQDDAHIFC-TEEQVNEETAGFIKMLR 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G S ++ P S E D + + + + Sbjct: 408 EVYADFGFDSFRIKFSDRPDNRAGSDE-----------------TWDKAEGALRSAVESL 450 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + L D++ + + ++ F + + A + Sbjct: 451 GLECELNPGEGAFYGPKLEF---VLRDAIGRDWQCGTLQVD----FVLPDR----LDAEY 499 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 DG + +G++ ++ S G +W ++ N Sbjct: 500 VAEDGSRQRPVMLHRAVLGSLERFLGILIESTAGHLPLWLAPRPVAVCTITN------SA 553 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + +L G D E+IG + P ++G + ++V I+ Sbjct: 554 DEYATTVQQKLVAAGIPAELDIRNEKIGFKVREHSRAKTPRIWVIGEQEAQHNQVAIRTL 613 Query: 422 LTGIREDMSLEEVINYASHRFSNNRPV 448 + E + L+E + + + P+ Sbjct: 614 GSQATETVDLDEAVAALAE--ATRLPI 638 >gi|322437350|ref|YP_004219562.1| threonyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9] gi|321165077|gb|ADW70782.1| threonyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9] Length = 687 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 84/442 (19%), Positives = 161/442 (36%), Gaps = 38/442 (8%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTG 65 L+E RD + +L L + I + + G+ W P G + +RE+ + G Sbjct: 276 FKRLEEIKARDHRVLGKQLDLFS--IQEVAGAGLIFWHPKGGLIRKAMEDWMREDCIKRG 333 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +LW SG ++YG+ M + +D P + I+++ KSY Sbjct: 334 YEMVFTPHIMRRELWKISGHEENYGENMYPPMELDDAEYRLKPMNCPGHILIYKNSPKSY 393 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + ++ +R E G++R R F DA+ F TP + + Sbjct: 394 RDLPVRYAELGNVYRYERSGTMHGLLRVRGFTQDDAHIFC-TPGQIEDEVTACIEFAESV 452 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + D + + S + + S + Sbjct: 453 LNTFGFHEFKVELST--------------WDPNDKKFIGSAEQWGVAVGSLRNALERKGI 498 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y D+ KL D L ++S + + ++ L +KG Sbjct: 499 PYKTIPGEAAFYGPKIDI---KLVDVLGRMWQLSTVQFD----WNLPARFDLH----YKG 547 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ V+ + G W +AP ++ L+ I + + Sbjct: 548 EDGELHQPVMVHRALFGSVERFFGVLIEHYAGAFPFW---LAPVQVGLVPI---SEKHLE 601 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + RL G V D+ E++ ++ + P +I+G K +V ++ R Sbjct: 602 YARTVQQRLKDAGVRVELDERNEKMNAKIREFGVNKVPFILIMGDKESQSDEVSVRTRGK 661 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G MS E + ++ Sbjct: 662 GDGGAMSTEAFVARCLELQKSH 683 >gi|160876111|ref|YP_001555427.1| prolyl-tRNA synthetase [Shewanella baltica OS195] gi|189083513|sp|A9KVR8|SYP_SHEB9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|160861633|gb|ABX50167.1| prolyl-tRNA synthetase [Shewanella baltica OS195] gi|315268308|gb|ADT95161.1| prolyl-tRNA synthetase [Shewanella baltica OS678] Length = 571 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 120/237 (50%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YS+LP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSYLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLWVE+GR++ +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPMVQPADLWVETGRWEKFGPELLRFKDRHNRDFVLGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MRSREFLMKDAYSF L + +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGMMRSREFLMKDAYSFHLDVDTMNETYEAMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y I R+GL P+ A++G IGG +SHEF VLA +GE + D+ E Sbjct: 181 YSNILTRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAY-STGSDYAANIEKA 236 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 112/206 (54%), Gaps = 3/206 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPM 298 D I + P A +D+ N + P+ + ARGIEVGHIF GT YS M Sbjct: 365 DDKHYFGINWERDLPLAQVADIRNVVEGEPTPDGSGIYAMARGIEVGHIFQLGTNYSKSM 424 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 +AT +GK + MG YG+G R+VAA IE + D +GIIWP+++APF + ++ + Sbjct: 425 NATVLDENGKSQVLLMGCYGVGVSRIVAAAIEQNFDDRGIIWPEAIAPFSVGILPMNMHK 484 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D E++Y L++ G DV DD E+ G FA +L+G P V++G + + E Sbjct: 485 SHRVTDIAEQLYKDLNEAGIDVLLDDRKERPGVMFADMELIGIPHTVVIGDRNIDAGVFE 544 Query: 418 IKHRLTGIREDMSLEEVINYASHRFS 443 K+R TG ++D+ ++++++ + Sbjct: 545 YKNRRTGEKQDIPFDQLLDFLKNAVK 570 >gi|260557205|ref|ZP_05829421.1| prolyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606] gi|260409311|gb|EEX02613.1| prolyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606] Length = 571 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 127/253 (50%), Positives = 173/253 (68%), Gaps = 1/253 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+Y+WLP+G + L V+AI+REE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGTRVLKKVDAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GA+E+ +P Q A LW ESGRY+ YG E+LR DR+D + GPTHEEV+TD+ R+ Sbjct: 61 MNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLRFKDRHDNPFVLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ + Sbjct: 121 ELKSYKQLPVNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHATQESLQETYDVMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P++A++G IGG SHEF VLA +GE + D+ E + Sbjct: 181 YSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLAASGEDDIAF-STESDYAANVEMAEAV 239 Query: 241 DIISLNSIVEQWT 253 + + +++ Sbjct: 240 LVGERAAPTQEFK 252 Score = 162 bits (410), Expect = 9e-38, Method: Composition-based stats. Identities = 72/192 (37%), Positives = 104/192 (54%), Gaps = 3/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A D+ N D P+ K RGIEVGHIF GTKYS + G DGK Sbjct: 379 ERDAQITEVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGTKYSEALGCKVLGEDGK 438 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEK 367 V MG YGIG RVVAA IE ++D KGIIWP ++APF+I+++ + A +A E Sbjct: 439 PFTVTMGCYGIGVTRVVAAAIEQNYDDKGIIWPQAIAPFEIAIVPMNAHKSPRTLEAAEA 498 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +YA L G D+ DD E+ G +F+ +L+G P ++++G K + E K R Sbjct: 499 LYAELQAQGFDLLLDDRNERPGVKFSDLELMGIPHRIVIGEKGLDAGTFEYKGRRDAEAS 558 Query: 428 DMSLEEVINYAS 439 +++ EE++ + Sbjct: 559 NLTKEELLAKLA 570 >gi|184159387|ref|YP_001847726.1| prolyl-tRNA synthetase [Acinetobacter baumannii ACICU] gi|239501767|ref|ZP_04661077.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB900] gi|332876227|ref|ZP_08444002.1| proline--tRNA ligase [Acinetobacter baumannii 6014059] gi|226695842|sp|B2HY33|SYP_ACIBC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226731481|sp|A3M8I1|SYP_ACIBT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|183210981|gb|ACC58379.1| Prolyl-tRNA synthetase [Acinetobacter baumannii ACICU] gi|193078264|gb|ABO13225.2| prolyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978] gi|322509299|gb|ADX04753.1| proS [Acinetobacter baumannii 1656-2] gi|323519326|gb|ADX93707.1| prolyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715] gi|332735499|gb|EGJ66551.1| proline--tRNA ligase [Acinetobacter baumannii 6014059] Length = 571 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 127/253 (50%), Positives = 173/253 (68%), Gaps = 1/253 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+Y+WLP+G + L V+AI+REE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGTRVLKKVDAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GA+E+ +P Q A LW ESGRY+ YG E+LR DR+D + GPTHEEV+TD+ R+ Sbjct: 61 MNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLRFKDRHDNPFVLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ + Sbjct: 121 ELKSYKQLPVNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHATQESLQETYDVMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P++A++G IGG SHEF VLA +GE + D+ E + Sbjct: 181 YSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLAASGEDDIAF-STESDYAANVEMAEAV 239 Query: 241 DIISLNSIVEQWT 253 + + +++ Sbjct: 240 LVGERAAPTQEFK 252 Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats. Identities = 73/192 (38%), Positives = 104/192 (54%), Gaps = 3/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A D+ N D P+ K RGIEVGHIF GTKYS + G DGK Sbjct: 379 ERDAQITEVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGTKYSEALGCKVLGEDGK 438 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEK 367 V MG YGIG RVVAA IE ++D KGIIWP ++APF+I+++ + A +A E Sbjct: 439 PFTVTMGCYGIGVTRVVAAAIEQNYDDKGIIWPQAIAPFEIAIVPMNAHKSPRTLEAAEA 498 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +YA L G DV DD E+ G +F+ +L+G P ++++G K + E K R Sbjct: 499 LYAELQAQGFDVLLDDRNERPGVKFSDLELMGIPHRIVIGEKGLDAGTFEYKGRRDAEAS 558 Query: 428 DMSLEEVINYAS 439 +++ EE++ + Sbjct: 559 NLTKEELLAKLA 570 >gi|169794838|ref|YP_001712631.1| prolyl-tRNA synthetase [Acinetobacter baumannii AYE] gi|213157835|ref|YP_002320633.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB0057] gi|215482385|ref|YP_002324567.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB307-0294] gi|301345755|ref|ZP_07226496.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB056] gi|301511535|ref|ZP_07236772.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB058] gi|301594855|ref|ZP_07239863.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB059] gi|332852292|ref|ZP_08434097.1| proline--tRNA ligase [Acinetobacter baumannii 6013150] gi|332870515|ref|ZP_08439279.1| proline--tRNA ligase [Acinetobacter baumannii 6013113] gi|226695840|sp|B7GWV6|SYP_ACIB3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226695841|sp|B7I854|SYP_ACIB5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226731418|sp|B0V4Y6|SYP_ACIBY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|169147765|emb|CAM85628.1| prolyl-tRNA synthetase [Acinetobacter baumannii AYE] gi|213056995|gb|ACJ41897.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB0057] gi|213986493|gb|ACJ56792.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB307-0294] gi|332729422|gb|EGJ60762.1| proline--tRNA ligase [Acinetobacter baumannii 6013150] gi|332732252|gb|EGJ63520.1| proline--tRNA ligase [Acinetobacter baumannii 6013113] Length = 571 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 127/253 (50%), Positives = 173/253 (68%), Gaps = 1/253 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+Y+WLP+G + L V+AI+REE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGTRVLKKVDAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GA+E+ +P Q A LW ESGRY+ YG E+LR DR+D + GPTHEEV+TD+ R+ Sbjct: 61 MNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLRFKDRHDNPFVLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ + Sbjct: 121 ELKSYKQLPVNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHATQESLQETYDVMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P++A++G IGG SHEF VLA +GE + D+ E + Sbjct: 181 YSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLAASGEDDIAF-STESDYAANVEMAEAV 239 Query: 241 DIISLNSIVEQWT 253 + + +++ Sbjct: 240 LVGERAAPTQEFK 252 Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats. Identities = 73/192 (38%), Positives = 104/192 (54%), Gaps = 3/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A D+ N D P+ K RGIEVGHIF GTKYS + G DGK Sbjct: 379 ERDAQITEVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGTKYSEALGCKVLGEDGK 438 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEK 367 V MG YGIG RVVAA IE ++D KGIIWP ++APF+I+++ + A +A E Sbjct: 439 PFTVTMGCYGIGVTRVVAAAIEQNYDDKGIIWPQAIAPFEIAIVPMNAHKSPRTLEAAEA 498 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +YA L G DV DD E+ G +F+ +L+G P ++++G K + E K R Sbjct: 499 LYAELQAQGFDVLLDDRNERPGVKFSDLELMGIPHRIVIGEKGLDAGTFEYKGRRDAEAS 558 Query: 428 DMSLEEVINYAS 439 +++ EE++ + Sbjct: 559 NLTKEELLAKLA 570 >gi|304409899|ref|ZP_07391518.1| prolyl-tRNA synthetase [Shewanella baltica OS183] gi|307302394|ref|ZP_07582152.1| prolyl-tRNA synthetase [Shewanella baltica BA175] gi|304351308|gb|EFM15707.1| prolyl-tRNA synthetase [Shewanella baltica OS183] gi|306914432|gb|EFN44853.1| prolyl-tRNA synthetase [Shewanella baltica BA175] Length = 571 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 120/237 (50%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YS+LP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSYLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLWVE+GR++ +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPMVQPADLWVETGRWEKFGPELLRFKDRHNRDFVLGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MRSREFLMKDAYSF L + +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGMMRSREFLMKDAYSFHLDVDTMNETYEAMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y I R+GL P+ A++G IGG +SHEF VLA +GE + D+ E Sbjct: 181 YSNILTRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAY-STGSDYAANIEKA 236 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 111/206 (53%), Gaps = 3/206 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPM 298 D I + P A +D+ N + P+ ARGIEVGHIF GT YS M Sbjct: 365 DHKHYFGINWERDLPTAQVADIRNVVEGEPTPDGSGTYAMARGIEVGHIFQLGTNYSKSM 424 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 +AT +GK + MG YG+G R+VAA IE + D +GIIWP+++APF + ++ + Sbjct: 425 NATVLDENGKSQVLLMGCYGVGVSRIVAAAIEQNFDDRGIIWPEAIAPFSVGILPMNMHK 484 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D E++Y L++ G DV DD E+ G FA +L+G P V++G + + E Sbjct: 485 SHRVTDIAEQLYKDLNEAGIDVLLDDRKERPGVMFADMELIGIPHTVVIGDRNIDAGVFE 544 Query: 418 IKHRLTGIREDMSLEEVINYASHRFS 443 K+R TG ++D+ ++++++ + Sbjct: 545 YKNRRTGEKQDIPFDQLLDFLKNAVK 570 >gi|294140027|ref|YP_003556005.1| prolyl-tRNA synthetase [Shewanella violacea DSS12] gi|293326496|dbj|BAJ01227.1| prolyl-tRNA synthetase [Shewanella violacea DSS12] Length = 569 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 127/240 (52%), Positives = 167/240 (69%), Gaps = 1/240 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P DAE+ SH+LMLR GM+ +++ G+YSWLP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPADAEVVSHQLMLRAGMVRRNASGLYSWLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q ADLW+E+GR++ +G E+LR DR+++ + GPTHEEV+TDI R Sbjct: 61 MNKAGAVEILMPMVQPADLWIETGRWEKFGPELLRFQDRHNRDFVLGPTHEEVITDIIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP T YQIQ KFRDE+RPRFGVMRSREFLMKDAYSF L E +Y+ MF + Sbjct: 121 EINSYKQLPLTLYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHLDQESMDVTYDAMFQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R+GL P+ A++G IGG +SHEF VLAD+GE + D+ E + Sbjct: 181 YNNIFERMGLSFRPVLADTGSIGGSMSHEFHVLADSGEDLIAY-STESDYAANIEKAEAP 239 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 70/203 (34%), Positives = 110/203 (54%), Gaps = 3/203 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPM 298 D I + P A +D+ N + P K A RGIEVGHIF GT YS M Sbjct: 365 DNKHYFGINWERDLPQAEAADLRNIIEGEPSPCGKGTIALLRGIEVGHIFQLGTNYSESM 424 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 A +GK + MG YG+G R+VAA IE +HD +GIIWP ++APF + ++ + Sbjct: 425 HANVLDQNGKSKTLLMGCYGVGVSRIVAAAIEQNHDDRGIIWPKAIAPFTVGILPMNMHK 484 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 +D EK+Y L+ G +V +DD E+ G FA +L+G P V++G + + + E Sbjct: 485 SHRVKDIAEKLYQDLNDAGIEVLFDDRKERPGVMFADMELVGLPHVVVIGDRNIDNGVFE 544 Query: 418 IKHRLTGIREDMSLEEVINYASH 440 K+R TG ++++ ++++++ Sbjct: 545 YKNRRTGEKQEIPFDQLLDFLKS 567 >gi|325528042|gb|EGD05262.1| prolyl-tRNA synthetase [Burkholderia sp. TJI49] Length = 578 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 137/288 (47%), Positives = 184/288 (63%), Gaps = 5/288 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGALELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD EG SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDAEGLNESYRKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y+RIF RLGL+ + A+SG IGG+ SHEF V+ADTGE + +F E + Sbjct: 181 YVRIFTRLGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYCPT-SEFAANVEAAEAL 239 Query: 240 ---DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 + + +E+ P A + E L L + + Sbjct: 240 SLIAERAAPAEAMEKVATPGKAKCEAVAELLGIPLERTIKSIVLATDN 287 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 76/192 (39%), Positives = 106/192 (55%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +DV N K D P+ K V RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPEVADVRNVKKGDPSPDGKGVIDICRGIEVGHVFQLGTKYSEAMGATFLDESGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE + D KGIIWP+S+APF++ L + R+A +K+YA Sbjct: 442 LMGCYGIGVTRILGAAIEQNFDDKGIIWPESIAPFEVVLCPMGYDRSDAVREAADKLYAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 LS G DV DD GE+ G FA +L+G P +V++G + + + K+E + R + Sbjct: 502 LSAAGIDVILDDRGERPGVMFADWELIGVPHRVVIGERGLKEGKIEYQGRRDAEATLLPA 561 Query: 432 EEVINYASHRFS 443 + V + + Sbjct: 562 DAVAATVAEKIR 573 >gi|221133881|ref|ZP_03560186.1| prolyl-tRNA synthetase [Glaciecola sp. HTCC2999] Length = 570 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 119/235 (50%), Positives = 167/235 (71%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAE+ SH+LMLR+GM+ + + G+Y++LP G + L+ V I+REE Sbjct: 1 MRTSQYLLSTQKETPADAEVVSHQLMLRSGMVRKVASGLYNYLPTGLRVLNKVANIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLW ESGR++ YG E+LR+ DR+ + + GPTHEEV+T + R+ Sbjct: 61 MNKAGAIEIQMPVVQPADLWEESGRWEEYGPELLRIKDRHQRDFVLGPTHEEVVTALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REFLMKDAYSF L+ + + +Y+KMF + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGIMRGREFLMKDAYSFHLSQDCLQTTYDKMFQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +F R+GL+ P+ A++G IGG SHEF VLAD+GE + + D+ E Sbjct: 181 YCNVFERIGLEYRPVIADNGSIGGSGSHEFHVLADSGEDDIAF-SNGSDYAANVE 234 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 64/192 (33%), Positives = 103/192 (53%), Gaps = 3/192 (1%) Query: 253 TAPYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 P D+ N + D P + RGIEVGHIF G KYS M+ GK Sbjct: 379 DVPEYEVFDLRNIQAGDPSPCGQGTIEIKRGIEVGHIFQLGNKYSQAMNCGVLTETGKHE 438 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIY 369 + MG YGIG R++AA IE +HD GI WPD++APF I++I + ++ EK+Y Sbjct: 439 TLTMGCYGIGVSRIMAAAIEQNHDKYGIKWPDAIAPFTIAIIPMNMHKSHRIKEVAEKLY 498 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +G +V +DD E+ G F +L+G P +++G + + + +VE K+R TG ++ + Sbjct: 499 EECLALGVEVLFDDRKERPGVMFNDMELIGVPHSIVIGERNLDNQEVEYKNRRTGEKKML 558 Query: 430 SLEEVINYASHR 441 ++ ++ + + Sbjct: 559 NIADLSEFIGNL 570 >gi|56475942|ref|YP_157531.1| prolyl-tRNA synthetase [Aromatoleum aromaticum EbN1] gi|81821206|sp|Q5P7T1|SYP_AZOSE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|56311985|emb|CAI06630.1| prolyl-tRNA synthetase [Aromatoleum aromaticum EbN1] Length = 583 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 123/235 (52%), Positives = 158/235 (67%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+ L+E P DAE+ S KLMLR G I + + GIYS+LP+G + + V I+R+E Sbjct: 1 MRASQYFISTLKEAPSDAEVVSQKLMLRAGFIRKVAAGIYSYLPIGLRVIRKVEDIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+++P +Q A+LW E+GR++ G EMLR DR+ + PT EEV+TDI R Sbjct: 61 MNRAGALELTMPLVQPAELWDETGRWEQMGAEMLRFKDRHQRDFALQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP FYQIQ KFRDE RPRFGVMR REF MKDAYSFD + SY+ M+ + Sbjct: 121 ELKSYRQLPKNFYQIQTKFRDERRPRFGVMRGREFTMKDAYSFDRDVAAAGRSYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL + A++G IGGD SHEF V+ADTGE + D+ E Sbjct: 181 YCRIFDRLGLTYRAVAADTGAIGGDRSHEFQVIADTGEDAIVYC-PGSDYAANIE 234 Score = 166 bits (420), Expect = 7e-39, Method: Composition-based stats. Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P + RGIEVGH+FY GTKYS M+ATF +GK + +MG Sbjct: 393 VADLRNIIEGDPSPDGRGRLAIQRGIEVGHVFYLGTKYSQSMNATFLDENGKPKHFEMGC 452 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R++ A IE +HD +GIIWPD++APF++ + + R K+Y L Sbjct: 453 YGIGVTRILGAAIEQNHDARGIIWPDAIAPFRVVVCPVGWGKSDAVRTEATKLYETLCAG 512 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G FA +L+G P +V++G + + D E + R + L E+ Sbjct: 513 GIDVILDDRDERPGVMFADWELIGVPHRVVIGDRGLKDGMAEYQGRRDAEAAKIPLAELA 572 Query: 436 NYASHRFS 443 + + Sbjct: 573 AFVGSKLR 580 >gi|314933837|ref|ZP_07841202.1| threonine--tRNA ligase [Staphylococcus caprae C87] gi|313653987|gb|EFS17744.1| threonine--tRNA ligase [Staphylococcus caprae C87] Length = 645 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 79/445 (17%), Positives = 155/445 (34%), Gaps = 33/445 (7%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD L L T G+ WLP G + I +++ Sbjct: 229 KAHLQMLEERRERDHRKIGKDLELFTN-SQLVGAGLPLWLPNGATIRREIERYIVDKEVS 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHI 122 G + P L + DL+ SG +D Y +M ++ M+ P + I+ + Sbjct: 288 MGYDHVYTPVLANVDLYKTSGHWDHYQDDMFPPMKLDETEEMVLRPMNCPHHMMIYNNKP 347 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ R E ++ + + + P+ K + ++ Sbjct: 348 HSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQ 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDD 241 ++ G K R D + + + D M S D+ Sbjct: 408 EVYEDFGFKDYTFRLS--------------YRDPEDKEKYMDDDEMWNKAESMLKEAVDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y DV ++ ++ + + +S ++ F ++ T Sbjct: 454 MGLPYVEAIGEAAFYGPKLDV---QVKTAMGKEETLSTAQLD----FLLPERF----ELT 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + G+DG+ H + G+ + + + +I +N+ H Sbjct: 503 YIGSDGEQHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPKQVEIIPVNVDLH---- 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ L G V DD E++G + A + P Q++VG K V +++V ++ Sbjct: 559 YDYARQLQDELKSQGVRVEIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNEVNVRQY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + +E + +E I + Sbjct: 619 GSQDQETLEKDEFIWNLVDEIRLKK 643 >gi|83720100|ref|YP_441693.1| prolyl-tRNA synthetase [Burkholderia thailandensis E264] gi|167618612|ref|ZP_02387243.1| prolyl-tRNA synthetase [Burkholderia thailandensis Bt4] gi|257137862|ref|ZP_05586124.1| prolyl-tRNA synthetase [Burkholderia thailandensis E264] gi|114152178|sp|Q2SZF6|SYP_BURTA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|83653925|gb|ABC37988.1| prolyl-tRNA synthetase [Burkholderia thailandensis E264] Length = 578 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 131/235 (55%), Positives = 169/235 (71%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKQNEFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD E K SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDHESLKESYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y+RIF R+GL+ P+ A++G IGG SHEF V+ADTGE + DF E Sbjct: 181 YVRIFTRIGLEFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPT-SDFAANVE 234 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 72/192 (37%), Positives = 105/192 (54%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K V RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPVIADIRNVKAGDPSPDGKGVLDICRGIEVGHVFQLGTKYSDAMGATFIDESGKAQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE + D KGIIWP+++APF++ L + R+A +K+YA Sbjct: 442 VMGCYGIGVTRILGAAIEQNFDDKGIIWPEAIAPFEVVLCPMGYDRSDAVREAADKLYAD 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R + Sbjct: 502 LAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGRRDAEATLLPA 561 Query: 432 EEVINYASHRFS 443 + + + Sbjct: 562 DSAATAVAEKVR 573 >gi|115350544|ref|YP_772383.1| prolyl-tRNA synthetase [Burkholderia ambifaria AMMD] gi|122324080|sp|Q0BIH4|SYP_BURCM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|115280532|gb|ABI86049.1| prolyl-tRNA synthetase [Burkholderia ambifaria AMMD] Length = 578 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 140/288 (48%), Positives = 183/288 (63%), Gaps = 5/288 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REFLMKDAYSFD G SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFLMKDAYSFDKDTAGLNESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y+RIF RLGL+ + A+SG IGG+ SHEF V+ADTGE + DF E + Sbjct: 181 YVRIFTRLGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYCPT-SDFAANIEAAEAL 239 Query: 240 ---DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 + + +E+ P A + E L L + E Sbjct: 240 PLIAERAAPAEAMEKVATPGKAKCEAVAELLAIPLERTIKSIVLATEN 287 Score = 176 bits (447), Expect = 6e-42, Method: Composition-based stats. Identities = 71/192 (36%), Positives = 106/192 (55%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +DV + K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPEVADVRDVKKGDPSPDGKGTIDICRGIEVGHVFQLGTKYSDAMGATFLDESGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YG+G R++ A IE + D KGIIWP+S+APF++ L + + R+A +K+YA Sbjct: 442 LMGCYGVGITRILGAAIEQNFDDKGIIWPESIAPFEVVLCPMGYDRSDMVREAADKLYAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G DV DD GE+ G FA +L+G P ++++G + + + K+E + R + Sbjct: 502 LAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKEGKIEYQGRRDAEATLLPA 561 Query: 432 EEVINYASHRFS 443 +E + + Sbjct: 562 DEAAATVTEKIR 573 >gi|302391162|ref|YP_003826982.1| prolyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501] gi|302203239|gb|ADL11917.1| prolyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501] Length = 569 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 133/390 (34%), Positives = 194/390 (49%), Gaps = 5/390 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ + P L+E P DAE+ SH+LMLR G++ + GIYS LPLG K + V IIREE Sbjct: 1 MKMSQMYSPTLKETPADAEVVSHQLMLRAGLMRKLGSGIYSHLPLGYKVIQKVEDIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P LQ A+LW ES R+ YG E++RL DR+ + GPTHEEV+TD+ + Sbjct: 61 MNKAGAQEVLLPALQPAELWKESNRWADYGPELMRLEDRHKRDFCLGPTHEEVITDLIKD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY++LPF YQIQ KFRDE+RPRFGV+RSREF+MKDAYSF+ E SY KM+ S Sbjct: 121 EVRSYKDLPFNLYQIQTKFRDEIRPRFGVLRSREFIMKDAYSFNPDKESLDESYEKMYDS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF---MDFPIPSENT 237 Y+ IF R GL + A++GPIGG SHEF+VLAD+GE V + + + + Sbjct: 181 YVEIFDRCGLDFRTVVADNGPIGGTDSHEFMVLADSGEDTVVFCSECDYSANLELADSDI 240 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 +F +E+ P A T + E S + + + G++ Sbjct: 241 EFTTTDDKPQELEKVETPGADTIEDLAEFFNCSTKKLLKSLIYQTQDGYVLALVRGDYQL 300 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + G + + + D + + + + Sbjct: 301 NEVKLRNFLGTAALEMAPAEELFNDTGIVTGFAGPVDIPDEVRVIADPSAMAVVNGVTGA 360 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ D D + Sbjct: 361 NEADYHYTN--VNPERDFTVDAIVDIREIK 388 Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 68/189 (35%), Positives = 105/189 (55%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 A D+ K + + + RGIEVG +F GTKYS M AT+ +GK + MG Sbjct: 380 AIVDIREIKEGEPCIDCGAELTMTRGIEVGQVFKLGTKYSDSMKATYIDDNGKSQSIFMG 439 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R VAA IE +HD GIIWP S+AP+ + ++ + +D+ + E +Y L++ Sbjct: 440 CYGIGVTRTVAAAIEQNHDDYGIIWPKSIAPYSVHIMQLG-NDEEIKRVSEDLYTALNQT 498 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G + +DD E+ G +F ADL+G P+QVI+G + D+K+EIK R T + ++ + + Sbjct: 499 GLEALYDDRSERAGVKFNDADLIGCPIQVIIGKNSLEDNKLEIKLRQTDEKLKINADNPV 558 Query: 436 NYASHRFSN 444 + Sbjct: 559 PKIKELLAK 567 >gi|261855919|ref|YP_003263202.1| threonyl-tRNA synthetase [Halothiobacillus neapolitanus c2] gi|261836388|gb|ACX96155.1| threonyl-tRNA synthetase [Halothiobacillus neapolitanus c2] Length = 637 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 70/438 (15%), Positives = 144/438 (32%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD + L + + G+ W P G + +R +G Sbjct: 231 YLNQLAEAEKRDHRRIGKQQNLF--HFQEEAPGLVFWHPKGWALWQVIEQHMRGIYRSSG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG +D+Y + M + + P + +F + SY Sbjct: 289 YDEIRCPQILDVSLWKKSGHWDNYQENMF-FTESEKRTFAVKPMNCPGHVQVFNHGLHSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F + + L + Sbjct: 348 RDLPIRYGEFGSCHRNEPSGALHGILRVRGFTQDDGHIFCM-ESQIESEVKAFHEQALSV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P S D + Sbjct: 407 YATFGFTDIQVKIALRPDKR-----------------LGSDVVWDEAEAALRGALRAAGV 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + + A Y + H L D++ ++ ++ G AT+ Sbjct: 450 AWTELPGEGAFYGPKIEYH---LKDAIGRTWQLGTIQVDFMMPERLG--------ATYVD 498 Query: 305 AD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + H V + +G+M ++ H G W +AP ++ ++ I Sbjct: 499 EHSERRHPVMLHRAIVGSMERFIGILIEHHAGMLPFW---LAPIQVVVMGITDKHAG--- 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ A+L G V D E++G + L P ++ G + + + ++ R Sbjct: 553 YVQQLTAKLKASGIRVVEDLRNEKVGFKIREHTLERVPYLLVAGDREMETESIAVRTREG 612 Query: 424 GIREDMSLEEVINYASHR 441 M++ +++ Sbjct: 613 TDLGVMAVTDLLEKLQSE 630 >gi|116515089|ref|YP_802718.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116256943|gb|ABJ90625.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 422 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 148/430 (34%), Positives = 231/430 (53%), Gaps = 23/430 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M KY L L+E P++ E SH+LMLR+GMI S GIY+WLP G + + + II Sbjct: 1 MYTKKYLLSTLKEKPKNIESISHQLMLRSGMIRMLSSGIYTWLPTGYRIIKKITKIISSI 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N G +E+ +P +Q +LW +SGR YG+E++++ DR +K + PTHEE + I + Sbjct: 61 LNNHGCMEICMPIIQPENLWKKSGRKKLYGEELIKITDRRNKKYVLSPTHEEAINYICQQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP TFYQIQ KFRDE+RPRFGV+R+ EFLMKDAYSF + + K +Y M Sbjct: 121 EIHSYKQLPITFYQIQKKFRDEIRPRFGVIRTIEFLMKDAYSFHINKDSLKKTYENMKNI 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF +L L ++A S +GG +S EF +++ GE ++ K ++ + Sbjct: 181 YIKIFKKLKLNFKIVKAHSKIMGGSISDEFHAISEMGENKIIFLKK-SNYAFNYNEFNEK 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 N ++++ E K + IE+GHIF KYS + Sbjct: 240 KKKFKNYLLQK---------------------EKKLIKKNSIEIGHIFQIEKKYSKNTNF 278 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + K + MG YGIG R+++++IE +HD GIIWP+ +APF++ ++ I + Sbjct: 279 YIQDKKNKKKLLNMGCYGIGINRIISSIIEQNHDKYGIIWPNCIAPFQVFILPINMYKNK 338 Query: 361 CRDACEKIYARLS-KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 K + DV +D+ E +G FA +L+G P +++ ++ KVE+ Sbjct: 339 KIKKIAKKLYKKLINKNIDVLFDNRNESLGKMFADMNLIGIPFGILISKNTITSKKVELY 398 Query: 420 HRLTGIREDM 429 R ++ + Sbjct: 399 SRKKNSKKKV 408 >gi|332300493|ref|YP_004442414.1| threonyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707] gi|332177556|gb|AEE13246.1| threonyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707] Length = 650 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 80/443 (18%), Positives = 154/443 (34%), Gaps = 37/443 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + +G+ WLP G + + ++ Q R G Sbjct: 234 YLALLEEAKKRDHRKIGKELELFA-FSQRVGQGLPLWLPRGTQLRLKLEDFLKRIQKRYG 292 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHIK 123 ++ P + + +L+ SG Y YG + + + +A + P + +I+R Sbjct: 293 YQQVMTPHIGNVELYKTSGHYAKYGADSFQVITTPQEGEAFMLKPMNCPHHCEIYRLKPH 352 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + +R E G+ R R F DA+ F P+ K + K+ Sbjct: 353 SYRDLPVRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCR-PDQVKEEFLKVMDIIF 411 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 IF L ++ + + T ++ S++ D + + Sbjct: 412 IIFRALDFENFEAQISLR-------------SQTDRSKYIGSEENWDRAEQAIIEACQEA 458 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y D + D+L ++ ++ + Sbjct: 459 GLPAHVEYDEAAFYGPKLDFM---VKDALGRRWQLGTIQVDYNLP--------ERFDLEY 507 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G D + H + G+M AV+ GK +W + I + Sbjct: 508 TGEDNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LAPDQVVILPVSERF 561 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + ++ LS+ V DD E++G + +L P +IVG + +D V ++ + Sbjct: 562 NEYANEVAVALSEHDISVSIDDRNEKVGRKIRDNELKRIPYMLIVGEQEQADGTVSVRKQ 621 Query: 422 LTGIREDMSLEEVINYASHRFSN 444 G + + Sbjct: 622 GEGDVGTEKISTFAERILQEIES 644 >gi|163750377|ref|ZP_02157617.1| prolyl-tRNA synthetase [Shewanella benthica KT99] gi|161329867|gb|EDQ00853.1| prolyl-tRNA synthetase [Shewanella benthica KT99] Length = 569 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 143/389 (36%), Positives = 200/389 (51%), Gaps = 20/389 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P DAE+ SH+LMLR GM+ +++ G+YSWLP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPADAEVVSHQLMLRAGMVRRNASGLYSWLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLW+E+GR++ +G E+LR DR+++ + GPTHEEV+TDI R Sbjct: 61 MNKAGAIEILMPMVQPADLWIETGRWEKFGPELLRFKDRHNRDFVLGPTHEEVITDIIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP T YQIQ KFRDE+RPRFGVMRSREFLMKDAYSF L E +Y+ MF + Sbjct: 121 EINSYKQLPLTLYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHLDQESMDVTYDTMFQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R+GL P+ A++G IGG +SHEF VLAD+GE + D+ E + Sbjct: 181 YNNIFERMGLSFRPVLADTGSIGGSMSHEFHVLADSGEDLIAY-STESDYAANIEKAEAP 239 Query: 241 -----------DIISLNSIVEQWTAPYAATSDVHNEKLFDSL---PENKRVSARGIEVGH 286 ++ +++ + A D+ EK +L + V I V Sbjct: 240 MPTEPRGAATQEMTLIDTPNAKTIAELVEQHDIAIEKTVKTLIVKGATEEVPLVAIVVRG 299 Query: 287 IFYFGTKYSLPMSA-----TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 + + A F + G IG + + V + Sbjct: 300 DHELNEVKAEKIEAVLAPFEFADEADIRKAIGAGPGSIGPVGLNIPVYIDHSVNVMSDFG 359 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYA 370 I + + + Sbjct: 360 AGANQDDKHYFGINWERDLPQAEAFDLRN 388 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 70/203 (34%), Positives = 107/203 (52%), Gaps = 3/203 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHN--EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 D I + P A D+ N E + RGIEVGHIF GT YS M Sbjct: 365 DDKHYFGINWERDLPQAEAFDLRNIIEGEPSPCGQGTIALLRGIEVGHIFQLGTNYSESM 424 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 A +GK + MG YG+G R+VAA IE +HD +GIIWP ++APFK+ ++ + Sbjct: 425 HANVLDKNGKSKTLLMGCYGVGVSRIVAAAIEQNHDDRGIIWPAAIAPFKVGILPMNMHK 484 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 +D EK+Y L+ G +V +DD E+ G FA +L+G P V++G + + + E Sbjct: 485 SHRVKDMAEKLYQDLNDAGIEVLFDDRKERPGVMFADMELVGLPHVVVIGDRNIDNGVFE 544 Query: 418 IKHRLTGIREDMSLEEVINYASH 440 K+R TG + D+ ++++++ Sbjct: 545 YKNRRTGEKRDIPFDQLLDFLKS 567 >gi|206561773|ref|YP_002232538.1| prolyl-tRNA synthetase [Burkholderia cenocepacia J2315] gi|226699125|sp|B4E5W6|SYP_BURCJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|198037815|emb|CAR53759.1| prolyl-tRNA synthetase [Burkholderia cenocepacia J2315] Length = 578 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 137/288 (47%), Positives = 183/288 (63%), Gaps = 5/288 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD G SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDAAGLNESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y+RIF RLGL+ + A+SG IGG+ SHEF V+ADTGE + +F E + Sbjct: 181 YVRIFSRLGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYCPT-SEFAANVEAAEAL 239 Query: 240 ---DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 + + +E+ P A + E L L + + Sbjct: 240 PLIAERAAPAEAMEKVATPGKAKCEAVAELLSIPLERTIKSIVLATDN 287 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 104/192 (54%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +DV N K D P+ K V RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPDVADVRNVKKGDPSPDGKGVIDICRGIEVGHVFQLGTKYSEAMGATFLDESGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YG+G R++ A IE + D +GIIWP+S+APF++ L + + R+ +K+YA Sbjct: 442 LMGCYGVGITRILGAAIEQNFDDRGIIWPESIAPFEVVLCPMGYDRSDLVRETADKLYAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD GE+ G FA +L+G P ++++G + + + K+E + R + Sbjct: 502 LVAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKEGKIEYQGRRDAEATLLPA 561 Query: 432 EEVINYASHRFS 443 + + + Sbjct: 562 DTAAATVAEKIR 573 >gi|148887021|sp|Q0VRL1|SYP_ALCBS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 572 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 135/388 (34%), Positives = 195/388 (50%), Gaps = 19/388 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L ++E P DA + SH+LMLR GM+ + + G+Y+WLP G + L V +IREE Sbjct: 1 MRTSQYLLATVKETPADAVVTSHQLMLRAGMVRKLASGLYTWLPSGLRVLRKVEQVIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P +Q +LW ESGR +YG E+LR+ DR++ GPTHEEV+TD+ R+ Sbjct: 61 MDRAGAQEVLMPVVQPMELWEESGRAPAYGPELLRITDRHNNPFCLGPTHEEVITDMVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFG+MRSREF+MKDAYSF + +Y M + Sbjct: 121 ELHSYKQLPANFYQIQTKFRDEIRPRFGIMRSREFIMKDAYSFHTNMDSLADTYQIMHRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----N 236 Y IF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCAIFDRLGLDYRPVEADTGAIGGAASHEFHVLAESGEDDIAFSD-GSDYAANVELAEAL 239 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN-KRVSARGIEVGHI-------- 287 + + + +E+ P A T + + + + K + +G E G + Sbjct: 240 APTSERPAPGAAIEKVDTPNAKTIEELVTQFNLPIEKTIKTLVVKGAEEGQLVALLVRGD 299 Query: 288 FYFGTKYSLPMSA-----TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 + + A F + V G +G + + VI + Sbjct: 300 HELNDIKAEKLDAVATPLEFASEEEIRKAVGAGPGSLGPVDLPFTVIADRSVAVMSDFGA 359 Query: 343 SVAPFKISLINIKAHDQVCRDACEKIYA 370 NI V + Sbjct: 360 GANEDGKHYFNINWERDVALPQIADLRN 387 Score = 166 bits (419), Expect = 9e-39, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 116/207 (56%), Gaps = 4/207 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLP 297 +D +I + +D+ N D P+ RGIEVGHIF GTKYS Sbjct: 363 EDGKHYFNINWERDVALPQIADLRNVVDGDPSPDGSGTLTIKRGIEVGHIFQLGTKYSEA 422 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-A 356 + AT +GK + MG YGIG RVVAA IE ++D +GIIWP+++APF+++L+ + Sbjct: 423 LGATVLDENGKSVVMPMGCYGIGVTRVVAAAIEQNNDDRGIIWPEAIAPFQVALVPVNIK 482 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 R+ EK+YA L+ +G +V +DD E++G + A +LLG P ++++ + + + Sbjct: 483 KSPRERELAEKLYAELTAMGIEVLFDDREKERLGVKLADTELLGIPHRIVIAERGMDNGV 542 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRF 442 +E K R + +++++E++ + + Sbjct: 543 LEYKGRRDADKTEVAMDEIVAFLKEKM 569 >gi|167586051|ref|ZP_02378439.1| prolyl-tRNA synthetase [Burkholderia ubonensis Bu] Length = 578 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 132/235 (56%), Positives = 171/235 (72%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPIGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNEFVIGPTHEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD +G SY KM+ + Sbjct: 121 QIRSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDADGLAESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y+RIF RLGL+ P+ A+SG IGG+ SHEF V+ADTGE + DF E Sbjct: 181 YVRIFTRLGLEFRPVAADSGSIGGNFSHEFHVIADTGEDAIAYC-PSSDFAANIE 234 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 69/192 (35%), Positives = 104/192 (54%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N + D P+ K V RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPEVADIRNVQKGDPSPDGKGVIDICRGIEVGHVFQLGTKYSEAMGATFIDESGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YG+G R++ A IE + D +GIIWP+S+APF++ L + R+A +K+YA Sbjct: 442 LMGCYGVGITRILGAAIEQNFDDRGIIWPESIAPFEVVLCPMGYDRSDAVREATDKLYAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G DV DD GE+ G FA +L+G P ++++G + + + K+E + R + Sbjct: 502 LAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKEGKLEYQGRRDAEATLLPA 561 Query: 432 EEVINYASHRFS 443 + + Sbjct: 562 DTAAATVVEKVR 573 >gi|167580503|ref|ZP_02373377.1| prolyl-tRNA synthetase [Burkholderia thailandensis TXDOH] Length = 578 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 131/235 (55%), Positives = 169/235 (71%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKQNEFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD E K SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDHESLKESYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y+RIF R+GL+ P+ A++G IGG SHEF V+ADTGE + DF E Sbjct: 181 YVRIFTRIGLEFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPT-SDFAANVE 234 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 72/192 (37%), Positives = 105/192 (54%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K V RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPVIADIRNVKAGDPSPDGKGVLDICRGIEVGHVFQLGTKYSDAMGATFIDESGKAQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE + D KGIIWP+++APF++ L + R+A +K+YA Sbjct: 442 VMGCYGIGVTRILGAAIEQNFDDKGIIWPEAIAPFEVVLCPMGYDRSDAVREAADKLYAD 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R + Sbjct: 502 LAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGRRDAEATLLPA 561 Query: 432 EEVINYASHRFS 443 + + + Sbjct: 562 DSAATAVAEKVR 573 >gi|332307477|ref|YP_004435328.1| prolyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174806|gb|AEE24060.1| prolyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 571 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 116/237 (48%), Positives = 165/237 (69%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAE+ SH+LMLR G++ + + G+Y+WLP G + L+ V I+REE Sbjct: 1 MRTSQYLLSTQKETPADAEVISHQLMLRAGLVRKLASGLYTWLPTGLRVLNKVAQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G++E+ +P +Q ADLW ESGR+D YG E+LR+ DR+ + + GPTHEEV+T + ++ Sbjct: 61 MDRAGSLEILMPVVQPADLWQESGRWDEYGPELLRVKDRHFRDFVLGPTHEEVVTALVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR REF MKDAYSF L+ E +Y++MF + Sbjct: 121 EVSSYKQLPLNVYQIQTKFRDEVRPRFGVMRGREFTMKDAYSFHLSDECLNKTYDEMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y R+F R+ L+ P+ A++G IGG+ SHEF VLA++GE + + D+ E Sbjct: 181 YCRVFERINLEFRPVIADNGSIGGNASHEFHVLAESGEDDIAF-SNASDYAANIEKA 236 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 66/194 (34%), Positives = 111/194 (57%), Gaps = 3/194 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A +D+ N + D P+ K RGIEVGHIF G+KYS ++ +GK Sbjct: 378 ERDAKEYQQADIRNVQAGDPSPDGKGTLEIKRGIEVGHIFQLGSKYSEALNCGVLDENGK 437 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEK 367 + MG YGIG R+VAA IE +HD GIIWPD++APFK++++ + + E+ Sbjct: 438 HQVLNMGCYGIGVSRIVAAAIEQNHDKYGIIWPDAIAPFKVAIVPMNMHKSHRIQQVAEQ 497 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +YA+L G +V +DD E+ G F +L+G P +++G + + + KVE K+R +G ++ Sbjct: 498 MYAQLKAAGIEVLFDDRKERPGVMFNDMELVGVPHTIVIGERNLDEQKVEYKNRRSGEKQ 557 Query: 428 DMSLEEVINYASHR 441 + + ++ ++ + Sbjct: 558 LIDIPQIADFIATL 571 >gi|305664643|ref|YP_003860930.1| threonyl-tRNA synthetase [Maribacter sp. HTCC2170] gi|88707344|gb|EAQ99590.1| threonyl-tRNA synthetase [Maribacter sp. HTCC2170] Length = 646 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 159/444 (35%), Gaps = 39/444 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L T + +G+ WLP G + + +++ Q + G Sbjct: 231 YLQLLEEAKKRDHRKLGKELELFT-FSQKVGQGLPLWLPKGAALRERLEQFLKKAQKKAG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIK 123 + P + +L+V SG Y YG++ + ++D+ + P + +I+ S Sbjct: 290 YEMVVTPHIGQKELYVTSGHYAKYGEDSFQPIHTPKDDEEFLLKPMNCPHHCEIYNSRPF 349 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP + + +R E G+ R R F DA+ F TP+ + + L Sbjct: 350 SYRELPKRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFC-TPDQLDQEFKDVIDLSL 408 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + LG ++ + D + + + + Sbjct: 409 YVLSSLGFENFKAQVSVR--------------DLDTPEKYIGSVENWEKAENAIINAAKE 454 Query: 243 ISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 L+ +VE A Y D + D+L N ++ ++ T Sbjct: 455 KGLDFVVESGEAAFYGPKLDFM---VKDALGRNWQLGTIQVDYNLP--------ERFDLT 503 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +KG+D + H + G+M A++ G +W I + Sbjct: 504 YKGSDNESHRPVMIHRAPFGSMERFVALLLEHTGGNFPLW------LIPEQAIILPVSEK 557 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 EK+ L D+ E +G + A++ P +IVG ++ + ++ Sbjct: 558 HEKYAEKVLNSLENNEIRALIDNRNETVGKKIREAEMGKLPFMLIVGESEEENNTIAVRR 617 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 ++++ ++ + ++ Sbjct: 618 HGGEDIGSINVQAFVDLVTKEINS 641 >gi|323701857|ref|ZP_08113527.1| prolyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574] gi|323533161|gb|EGB23030.1| prolyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574] Length = 568 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 112/244 (45%), Positives = 159/244 (65%), Gaps = 1/244 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +AE+ SH+L+LR G I + + GIY++LPL Q+ L + I+REE Sbjct: 1 MRTSQMLMPTLREVPAEAEVVSHQLLLRAGFIRKSASGIYTYLPLAQRVLKKIKEIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G E+ +P +Q A++W+ESGR+ YG E+ RL DR+++ GPTHEEV+T + R Sbjct: 61 MDKQGGQELLMPIVQPAEMWLESGRWHVYGPELFRLKDRHNRDFCLGPTHEEVITILVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ +P YQIQ KFRDE RPRFG+MR REF+MKD YSFD G SY KM+ + Sbjct: 121 EVRSYKQMPLLLYQIQNKFRDERRPRFGLMRGREFIMKDLYSFDRDEAGLDISYQKMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F+R GLK P+ A+SG IGG +HEF+VLAD+GE + D+ E Sbjct: 181 YTNVFNRCGLKFRPVEADSGAIGGSDTHEFMVLADSGEAAILFCSQC-DYAANIEKAAVP 239 Query: 241 DIIS 244 + Sbjct: 240 AAGA 243 Score = 180 bits (456), Expect = 5e-43, Method: Composition-based stats. Identities = 69/188 (36%), Positives = 110/188 (58%), Gaps = 2/188 (1%) Query: 259 TSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 D+ + + P+ + ARGIEVG IF GTKYS + ATF +GK+ + MG Sbjct: 380 VEDIRMVQAGEPCPKCGAELQQARGIEVGQIFKLGTKYSKALGATFLDENGKEKPIVMGC 439 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R +AA IE +HD GIIWP S+AP+ +I + A D+ E +Y +L+++G Sbjct: 440 YGIGVSRTMAAAIEQNHDQDGIIWPASIAPYHAIVIPVSAKDEKQMQLAESLYNKLNQIG 499 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + DD E+ G +F ADL+G+PL+++VG+K ++D VE++ R +G + + L+++ Sbjct: 500 VETVLDDRAERPGVKFKDADLIGYPLRIVVGNKAMTDGLVEVRQRKSGQTDLIPLDQIPE 559 Query: 437 YASHRFSN 444 + Sbjct: 560 KVKEILAT 567 >gi|254284280|ref|ZP_04959248.1| prolyl-tRNA synthetase [gamma proteobacterium NOR51-B] gi|219680483|gb|EED36832.1| prolyl-tRNA synthetase [gamma proteobacterium NOR51-B] Length = 564 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 123/231 (53%), Positives = 163/231 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L L+E P DAEI SH+LMLR GMI + + GIY+W+PLG + L V A++REE Sbjct: 5 MRASQFPLFTLKETPSDAEIISHQLMLRAGMIRRIAAGIYTWMPLGLRVLRRVEAVVREE 64 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+++P +Q A+LW ESGR++ YG E+ RL DR+D+ GPTHEEV++ + RS Sbjct: 65 MNNAGALEITMPVVQPAELWQESGRWEQYGPELARLRDRHDREFCLGPTHEEVVSALARS 124 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y +M + Sbjct: 125 EIKSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHVDQASQEETYWRMHDA 184 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 Y RIF+RL L P+ A++G IGG+ SHEF VLAD+GE + S Sbjct: 185 YSRIFNRLSLAFRPVEADTGSIGGNHSHEFHVLADSGEDAIAFSDTSSYAA 235 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 61/148 (41%), Positives = 81/148 (54%), Gaps = 3/148 (2%) Query: 258 ATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T+D+ D E RGIEVGHIF GTKYS M A +GK + MG Sbjct: 385 ETADLREVVAGDPSPCGEGSLEICRGIEVGHIFQLGTKYSEAMGAEVLDENGKSTAMAMG 444 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSK 374 YGIG R+VAA IE ++D GIIWP S+APF ++L+ + Q DA E +Y+ + Sbjct: 445 CYGIGITRIVAAAIEQNNDDNGIIWPVSMAPFTVALVPLNMGKSQAVADATEDLYSACVE 504 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPL 402 G DVF DD ++ G +FA +L+ P Sbjct: 505 AGIDVFMDDRDQRPGVKFAEMELIASPF 532 >gi|268590504|ref|ZP_06124725.1| hypothetical protein PROVRETT_06701 [Providencia rettgeri DSM 1131] gi|291314090|gb|EFE54543.1| proline--tRNA ligase [Providencia rettgeri DSM 1131] Length = 572 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 122/235 (51%), Positives = 159/235 (67%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SH+LMLR GMI + + G+Y WLP G + L V I+REE Sbjct: 1 MRTSKYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYDWLPTGVRVLRKVETIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MENAGAIEVSLPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP +QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + E + +Y+ M+ + Sbjct: 121 EITSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQESLQETYDAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+G ++A++G IGG SHEF VLA GE V D+ E Sbjct: 181 YSKIFTRIGFDFRAVQADTGSIGGSASHEFQVLAKNGEDDVIF-STESDYAANIE 234 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 76/187 (40%), Positives = 113/187 (60%), Gaps = 3/187 (1%) Query: 261 DVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P+ K V RGIEVGHIF GTKYS M A+ + DG + V MG YG Sbjct: 386 DLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSEAMKASVQNEDGHNQIVTMGCYG 445 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKVGC 377 IG R+VAA IE SHD +GIIWPD++APF+++++ + H ++ EK+YA L G Sbjct: 446 IGVTRIVAAAIEQSHDDRGIIWPDAIAPFQVAILPMNMHKSYRVKEVAEKLYADLKANGI 505 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 DV +DD E+ G FA +L+G P +++G + + ++++E K R + +E + LE VI++ Sbjct: 506 DVIFDDRKERPGVMFADMELIGVPYTIVIGDRNLDNNQIEYKSRRSDDKELVGLENVISF 565 Query: 438 ASHRFSN 444 + Sbjct: 566 LKGKLGK 572 >gi|225851210|ref|YP_002731444.1| threonyl-tRNA synthetase [Persephonella marina EX-H1] gi|225645886|gb|ACO04072.1| threonyl-tRNA synthetase [Persephonella marina EX-H1] Length = 646 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 81/446 (18%), Positives = 149/446 (33%), Gaps = 40/446 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQ 61 KY + + RD +L L +I + G+ WLP G + + +EE Sbjct: 234 LKKYMNMLEEAKKRDHRKLGRELELF--IIDEDVGGGLALWLPKGAVIRNEIETAWKEEH 291 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G + P + LW SG D Y + M ++ P + +I++S Sbjct: 292 IKRGYQLVYTPHVGKEQLWQTSGHVDFYRENMFPEMMIEEEGYFVKPMNCPFHVEIYKSR 351 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SY+ LP ++ +R E G+MR R F DA+ + K Sbjct: 352 QRSYKELPIKLAELGTVYRYERSGVLHGLMRVRGFTQDDAHIICR-----EDQVEKEIQD 406 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 L + +EF + T + + S + Sbjct: 407 VLHLVLDTLRTY-------------GFNEFQIFLSTRPEKSVGDDRMWEVATESLRKAIE 453 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I E A Y DV K+ D++ + S + F ++ + Sbjct: 454 SVGLDYQIDEGGGAFYGPKIDV---KIKDAIGRMWQCSTIQFD----FNLPERFDMY--- 503 Query: 301 TFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G D K H + G++ V+ + G +W V I + Sbjct: 504 -YIGEDNKRHRPYMIHRAIFGSIERFIGVLIEHYAGLLPLWLSPVQAKIIPVA------D 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +++ +L + G V D+ E++ + A+L P +IVG K V ++ Sbjct: 557 THIPYAKEVEKKLKEAGLRVEVDERSERMNRKIRDAELQKIPYMLIVGDKEQQTGSVSVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSNN 445 + G ++++ I A Sbjct: 617 TKKKGNVGLFTVDQFIQNAKKLIEER 642 >gi|221134666|ref|ZP_03560969.1| threonyl-tRNA synthetase [Glaciecola sp. HTCC2999] Length = 637 Score = 245 bits (624), Expect = 2e-62, Method: Composition-based stats. Identities = 80/447 (17%), Positives = 152/447 (34%), Gaps = 42/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E RD L L + + G+ W G + + IR++ Sbjct: 227 KQLKAYLNRLEEAEKRDHRKIGKTLDLF--HWQEEAPGMVFWHNDGWSIYTELESFIRKK 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + E+ P + LW +SG + Y M + + P + IF Sbjct: 285 LTQYDYQEVKGPLMMDRSLWEKSGHWGKYSSNMFT-TESEKREYAIKPMNCPGHVQIFNQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R+E G+MR R F DA+ F + + Sbjct: 344 GLKSYRDLPLRMAEFGCCHRNEPSGALHGLMRVRGFTQDDAHIFCTEEQILDE-VSGCIK 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + G + I ++ + P S + ++ ++ Sbjct: 403 MVYDTYETFGFEKIVVKLSTRPEERVGSDDIWDKTESAL---------------ADALKA 447 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 +DI E A Y + L D L + ++ G+ Sbjct: 448 NDIEFDYQPGEG--AFYGPKIEF---TLHDCLDRAWQCGTVQLDFSMPGRLGS------- 495 Query: 300 ATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 T+ DG+ V + +G++ ++ + +P +AP + ++NI Sbjct: 496 -TYVAEDGERKVPVMIHRAILGSLERFIGILT---EEYAGHFPTWLAPTQAVILNITDK- 550 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + C K+ V D E+IG + L P ++VG K + +V + Sbjct: 551 --QSEYCTKLQKTARNA-IRVKPDLRNEKIGFKIREHTLKRVPYMLVVGDKEMEAGEVAV 607 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R MS+E+ + ++ Sbjct: 608 RTRKGDDLGKMSIEDFLIKVRTDIADK 634 >gi|254304252|ref|ZP_04971610.1| threonine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324444|gb|EDK89694.1| threonine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 637 Score = 245 bits (624), Expect = 2e-62, Method: Composition-based stats. Identities = 81/443 (18%), Positives = 164/443 (37%), Gaps = 41/443 (9%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R K+ + + RD +L L + ++ G +LP G + + + R+E Sbjct: 226 RLKKHLKLMEEAEKRDHRKLGKELELF--FLSEYGPGFPFFLPKGMVIRNVLIDLWRKEH 283 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + +++ P + + +LW SG + +Y + M ++ ++ P + F+ Sbjct: 284 EKAKYLQLETPIMLNKELWEVSGHWFNYRENMYT-SEIDELEFAIKPMNCPGGVLSFKHQ 342 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP ++ R E G+MR R F D++ F +TP+ + + Sbjct: 343 LHSYKDLPARLAELGRVHRHEFSGALHGLMRVRSFTQDDSHIF-MTPDQVQDEIIGVVNL 401 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + + +L + + P S E D + D Sbjct: 402 IDKFYSKLFGFEYEIELSTKPEKAIGSQE-----------------IWDMAEAALAGALD 444 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I A Y D K+ D++ + ++ F ++ Sbjct: 445 KLGRKYKINPGDGAFYGPKLDF---KIKDAIGRMWQCGTIQLD----FNLPERFD----V 493 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 T+ G DG+ H + G++ ++ + G +W V ++L + Sbjct: 494 TYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFPMWLAPVQVKVLTL------ND 547 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEI 418 C ++I +L ++G DD E IG + A+ P+Q+I+G V + +V I Sbjct: 548 ECIPYAKEIMNKLEELGIRAELDDRNETIGYKIREANGRYKIPMQLIIGKNEVENKEVNI 607 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + + SL+E NY Sbjct: 608 RRFGSKDQFSKSLDEFYNYVVDE 630 >gi|19703946|ref|NP_603508.1| threonyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|22654111|sp|Q8RFS6|SYT_FUSNN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|19714122|gb|AAL94807.1| Threonyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 620 Score = 245 bits (624), Expect = 2e-62, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 160/443 (36%), Gaps = 41/443 (9%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R + + + RD +L L + ++ G +LP G + + + R E Sbjct: 209 RLKHHLKLMEEAEKRDHRKLGKELELF--FLSEYGPGFPFFLPKGMIVRNVLIDLWRREH 266 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G ++ P + + +LW SG + +Y + M ++ ++ P + F+ Sbjct: 267 EKAGYQQLETPIMLNKELWEISGHWFNYRENMYT-SEIDELEFAIKPMNCPGGVLAFKHQ 325 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP ++ R E G+MR R F D++ F +TP+ + + Sbjct: 326 LHSYKDLPARLAELGRVHRHEFSGALHGLMRVRSFTQDDSHIF-MTPDQVQDEIIGVVNL 384 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + + +L + + P S E D + D Sbjct: 385 IDKFYSKLFGFEYEIELSTKPEKAIGSQE-----------------IWDMAEAALAGALD 427 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I A Y D K+ D++ + ++ F ++ Sbjct: 428 KLGRKYKINPGDGAFYGPKLDF---KIKDAIGRMWQCGTIQLD----FNLPERFD----V 476 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 T+ G DG+ H + G++ ++ + G +W V ++L + Sbjct: 477 TYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFPMWLAPVQVKVLTL------ND 530 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEI 418 C ++I +L ++G DD E IG + A+ P+Q+I+G V + +V I Sbjct: 531 ECIPYAKEIMNKLEELGIRAELDDRNETIGYKIREANGKYKIPMQLIIGKNEVENKEVNI 590 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + + L+E Y Sbjct: 591 RRFGSKDQFSKLLDEFYTYVVDE 613 >gi|163790751|ref|ZP_02185177.1| threonyl-tRNA synthetase [Carnobacterium sp. AT7] gi|159873931|gb|EDP68009.1| threonyl-tRNA synthetase [Carnobacterium sp. AT7] Length = 645 Score = 245 bits (624), Expect = 2e-62, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 161/442 (36%), Gaps = 34/442 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L MI + G+ WLP G + I + + Sbjct: 231 FIQMREEAKLRDHRKLGKELDLF--MISPEVGSGLPFWLPKGATIRRTIERYIVDREISL 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D M + P + ++++ + Sbjct: 289 GYQHVYTPIMADVNLYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDVH 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ R E ++ + + + P+ + + + L Sbjct: 349 SYRELPIRIAELGQMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIEEEFKRTLELMLA 408 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDI 242 ++ + R D T+ + D + DD+ Sbjct: 409 VYGDFNITDYRFRLS--------------YRDPNNTEKYYDDDAMWEKAQTMLKAAMDDM 454 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV + ++ + +S ++ F ++ T+ Sbjct: 455 GLDYFEAEGEAAFYGPKLDVL---VKTAIGIEETLSTIQLD----FLLPERFD----LTY 503 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++++ + + G + + + + +P +AP + ++I + + Sbjct: 504 VGEDGENNHRPVVIHR-GIVSTMERFVAYLIEEYKGAFPTWLAPVQATIIPVNL--DMHT 560 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D +I ++ ++G V D+ E++G + + P Q++VG V D+ V ++ Sbjct: 561 DYAYEIKKQMERIGMRVEVDERNEKMGYKIRASQTQKIPYQLVVGDSEVQDNTVAVRKYG 620 Query: 423 TGIREDMSLEEVINYASHRFSN 444 ++L E + S N Sbjct: 621 EKATVTINLSEYLETVSKEIEN 642 >gi|152981235|ref|YP_001354678.1| prolyl-tRNA synthetase [Janthinobacterium sp. Marseille] gi|166980130|sp|A6T2D1|SYP_JANMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|151281312|gb|ABR89722.1| prolyl-tRNA synthetase [Janthinobacterium sp. Marseille] Length = 577 Score = 245 bits (624), Expect = 2e-62, Method: Composition-based stats. Identities = 121/235 (51%), Positives = 161/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G + + V AIIREE Sbjct: 1 MRASRFFISTLKEAPSDAEIVSHKLMMRAGMIKKIGSGIYTYMPMGLRVIRKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N AIE+ +P +Q A+LW E+GR+D G E++R+ DR+ + PT EEV+TD+ R+ Sbjct: 61 MNNAHAIELLMPLVQPAELWQETGRWDKMGAELMRVKDRHGREFAIQPTSEEVVTDVVRT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD +G K SY MF + Sbjct: 121 EIKSYRQLPINFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDIDGLKKSYQIMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y++IF+R GL+ + A++G IGG SHEF V+ADTGE + + D+ E Sbjct: 181 YVKIFNRFGLQFRAVAADNGAIGGSGSHEFHVIADTGEDALVYCPN-SDYAANME 234 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 108/193 (55%), Gaps = 3/193 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A D+ N D P+ K RGIEVGH+F GT YS M AT+ +GK + Sbjct: 385 PEAQVFDIRNVVEGDPSPDGKGTLAIQRGIEVGHVFQLGTAYSESMKATYLDENGKPQLI 444 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 QMG YGIG R++ A IE + D KGIIWP ++APF++ L + + + +K+Y Sbjct: 445 QMGCYGIGVTRILGAAIEQNFDDKGIIWPTALAPFEVVLCPMGYDRSEGVKAETDKLYEA 504 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD GE+ G+ FA +L+G P ++++G + + + K+E + R ++L Sbjct: 505 LQAAGVDVILDDRGERPGAMFADWELIGVPHRIVIGDRGLKEGKLEYQGRRDAAATPVAL 564 Query: 432 EEVINYASHRFSN 444 EE++ + + +N Sbjct: 565 EEMLGFVQAKLAN 577 >gi|304396668|ref|ZP_07378549.1| prolyl-tRNA synthetase [Pantoea sp. aB] gi|304356177|gb|EFM20543.1| prolyl-tRNA synthetase [Pantoea sp. aB] Length = 572 Score = 245 bits (624), Expect = 2e-62, Method: Composition-based stats. Identities = 126/285 (44%), Positives = 175/285 (61%), Gaps = 20/285 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L +E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTQYLLSTQKETPSDAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q ADLW ESGR++ YG E+LR+ADR+++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAVEILMPVVQPADLWQESGRWEEYGPELLRIADRHERPFVLGPTHEEVVTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQASLQETYDAMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V D+ E Sbjct: 181 YSQIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIF-STDSDYAANIELAEAV 239 Query: 236 --------------NTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 + D ++ +VEQ+ P T K Sbjct: 240 APAGERAAPSQEMQLVETPDAKTIAELVEQFNVPVEKTVKTLIVK 284 Score = 180 bits (456), Expect = 5e-43, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 113/193 (58%), Gaps = 3/193 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A+ +D+ N D P+ K RGIEVGHIF GTKYS + A+ +G DG++ + Sbjct: 380 PLASVADIRNVVEGDLSPDGKGTLQIKRGIEVGHIFQLGTKYSDALKASVQGEDGRNQVM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWP ++APF+++++ + ++ E++YA Sbjct: 440 SMGCYGIGITRVVAAAIEQNHDDRGIIWPAALAPFEVAILPMNMQKSFRVKELAEELYAT 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G +V DD E+ G FA +L+G P +++G + + + ++E K R G ++ + Sbjct: 500 LRAKGVEVILDDRKERPGVMFADMELIGVPHTIVIGDRNLDNQEIEYKSRRAGEKQMIKQ 559 Query: 432 EEVINYASHRFSN 444 +E++ + + Sbjct: 560 DEIVEFLLKALNK 572 >gi|147677598|ref|YP_001211813.1| prolyl-tRNA synthetase [Pelotomaculum thermopropionicum SI] gi|189083504|sp|A5D2U6|SYP_PELTS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|146273695|dbj|BAF59444.1| prolyl-tRNA synthetase [Pelotomaculum thermopropionicum SI] Length = 570 Score = 245 bits (624), Expect = 2e-62, Method: Composition-based stats. Identities = 118/273 (43%), Positives = 166/273 (60%), Gaps = 4/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F P L+E P +AE+ SH+L+LR G I + + G+Y++LPL + + + I+REE Sbjct: 1 MRASELFSPTLREVPAEAEVVSHQLLLRAGFIRRAAAGVYTYLPLAMRVIKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G E+ +P +Q A++W ESGR+D YG E+ RL DR+D+ GPTHEE++T + R Sbjct: 61 MDRQGGQELLMPIIQPAEIWQESGRWDVYGPELFRLKDRHDRDFALGPTHEEIITVLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ K+RDE RPRFG+MR REF+MKD YSFD EG SY KM+ + Sbjct: 121 EVSSYKQLPLLLYQIQNKYRDERRPRFGLMRGREFIMKDLYSFDRDEEGLNVSYMKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSENTDF 239 Y R+F R GL P+ A+SG IGG +HEF+VLA++GE V +C + D+ E Sbjct: 181 YTRVFQRCGLHFRPVEADSGAIGGSDTHEFMVLAESGEATVLYCDGNGCDYAANVEKAAL 240 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 E+ P AA + + Sbjct: 241 P---FKERRTEEEMRPVAARETPGCRSVEEVCG 270 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 68/225 (30%), Positives = 105/225 (46%), Gaps = 2/225 (0%) Query: 222 FCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSA 279 + + + D L ++ +D+ + + P A Sbjct: 345 IIADPEAAAAVNAVTGANRDDTHLINVNPGRDFKIDLVADIRMVQAGEPCPRCGAGLKEA 404 Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVG IF G KYS + A++ G+ V MG YGIG R +AA IE +HD GII Sbjct: 405 KGIEVGQIFKLGDKYSRALGASYLDEKGQSRPVIMGCYGIGITRTMAAAIEQNHDRDGII 464 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP S+APF + +I + D E++Y+RL G + DD E+ G +F ADL+G Sbjct: 465 WPASIAPFHVVVIPVNVKDGGQYAMAEEVYSRLWAAGIEAVLDDRTERAGVKFKDADLIG 524 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +PL++ +G+K V + VEI+ R G + + E+ Sbjct: 525 YPLRITIGAKAVEEKLVEIRIRKNGETVFVPMNELEEKVEDMLKE 569 >gi|332701961|ref|ZP_08422049.1| threonyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay] gi|332552110|gb|EGJ49154.1| threonyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay] Length = 655 Score = 245 bits (624), Expect = 2e-62, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 144/441 (32%), Gaps = 40/441 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K+ I + RD +L L + + G+ W P G + R+E Sbjct: 227 LKKHLERIEEAKKRDHRKLGTQLDLFS-FCDEAGAGMVIWHPKGALIRTIIEDFERKEHL 285 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 R G + P L +LW SG Y+ Y + M + +++A P + I++S + Sbjct: 286 RRGYHIVQGPQLLKRELWERSGHYEHYRQNM-YFTEIDEQAYGVKPMNCLSHMLIYKSKV 344 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP +++ + R E G++R R+F DA+ + + Sbjct: 345 RSYRDLPLRLFELGVVHRHEKSGVLHGLLRVRQFTQDDAHIICRPDQLEDEIIGVVHFV- 403 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + G F T + S + + D Sbjct: 404 ------------------RDVMGIFGFNFEAEISTRPEKSIGSDADWERATNALMKALDK 445 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ + D+L + + + F ++ Sbjct: 446 AGLKYGINEGDGAFYGPKIDI---VIKDALDRRWQCATIQCD----FTLPERFD----LA 494 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G DG+ H + +G++ V+ G +W +++ Sbjct: 495 YVGQDGERHRPVMVHRVILGSLERFIGVLTEHFAGAFPVWLAPEQVRILNVT------DA 548 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + K+ L + G D E++G + A L P ++VG K V V ++ Sbjct: 549 QAEYTSKVLDALREQGIRAEADLRNEKLGYKVREAQLEKIPYMLVVGDKEVETGVVNVRT 608 Query: 421 RLTGIREDMSLEEVINYASHR 441 R + EV Sbjct: 609 RSGENLGVKTPAEVAAMIHDE 629 >gi|319898981|ref|YP_004159074.1| Threonyl-tRNA synthetase [Bartonella clarridgeiae 73] gi|319402945|emb|CBI76496.1| Threonyl-tRNA synthetase [Bartonella clarridgeiae 73] Length = 658 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 89/445 (20%), Positives = 156/445 (35%), Gaps = 39/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD ++ L + G+ W P G K N+ + +R + Sbjct: 233 KVYLHMLEETEKRDHRRLGREMDLF--HFQEEGPGMIFWHPKGWKMFQNLISYMRRRLDD 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA---DRNDKAMIY--GPTHEEVMTDIF 118 E+ P + LW SG + Y + M + D + IY P + IF Sbjct: 291 HKYAEVQAPQVLDKSLWEVSGHWRWYKENMFKTIPAADDWNNEYIYALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + L R E G+MR+R F DA+ F + + + Sbjct: 351 KHGLKSYRDLPIRLAEFGLVHRYEPSGSLHGLMRARSFTQDDAHIFCTEEQLADECLSIN 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L + G + I ++ + P S E A+ T V + + Sbjct: 411 -DLILSTYADFGFEEISLKLSTRPEKRVGSDELWDHAENIMTSVL--------KTIEKKS 461 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 IS+ + A Y + L D++ + ++ FG Sbjct: 462 SGRVRISI---LPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------ 509 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + D + + G+M ++ + G W I + Sbjct: 510 --AFYIDKDSEKRQPVMIHRAIFGSMERFLGILIENFSGHMPFW------LAPQQIAVAT 561 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D +KI A+L +G V D E+I + L P+ ++ G + + V Sbjct: 562 ITSDANDYAKKITAKLKAIGLSVILDSRNEKINYKIREHSLQKIPVILVCGKREAETNSV 621 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + + +SLEEVI Sbjct: 622 NMRRLGSVEQSLLSLEEVIKQLLDE 646 >gi|120598308|ref|YP_962882.1| prolyl-tRNA synthetase [Shewanella sp. W3-18-1] gi|152016601|sp|A1RI33|SYP_SHESW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|120558401|gb|ABM24328.1| prolyl-tRNA synthetase [Shewanella sp. W3-18-1] Length = 571 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 121/237 (51%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YS+LP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSYLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLWVE+GR+D +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPMVQPADLWVETGRWDKFGPELLRFKDRHNRDFVLGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MRSREFLMKDAYSF L + +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGMMRSREFLMKDAYSFHLDVDTMNETYEAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y I R+GL P+ A++G IGG +SHEF VLA +GE + D+ E Sbjct: 181 YSNILSRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAY-STGSDYAANIEKA 236 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 111/207 (53%), Gaps = 3/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPM 298 D I + P A +D+ N + P+ ARGIEVGHIF GT YS M Sbjct: 365 DDKHYFGINWERDLPLAQAADIRNVVEGEPTPDGLGTYAMARGIEVGHIFQLGTNYSKSM 424 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 +AT +GK + MG YG+G R+VAA IE + D +GI+WP+++APF + ++ + Sbjct: 425 NATVLDENGKSQVLLMGCYGVGVSRIVAAAIEQNFDDRGIVWPEAIAPFSVGILPMNMHK 484 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D E++Y LS G +V DD E+ G FA +L+G P V++G + + E Sbjct: 485 SHRVTDIAEQLYKDLSAAGIEVLLDDRKERPGVMFADMELIGIPHTVVIGDRNIDAGVFE 544 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSN 444 K+R TG ++D+ ++++++ + + Sbjct: 545 YKNRRTGEKQDIPFDQLVDFLKNAVKS 571 >gi|146293614|ref|YP_001184038.1| prolyl-tRNA synthetase [Shewanella putrefaciens CN-32] gi|166980158|sp|A4Y8F6|SYP_SHEPC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|145565304|gb|ABP76239.1| prolyl-tRNA synthetase [Shewanella putrefaciens CN-32] Length = 571 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 121/237 (51%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YS+LP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSYLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLWVE+GR+D +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPMVQPADLWVETGRWDKFGPELLRFKDRHNRDFVLGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MRSREFLMKDAYSF L + +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGMMRSREFLMKDAYSFHLDVDTMNETYEAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y I R+GL P+ A++G IGG +SHEF VLA +GE + D+ E Sbjct: 181 YSNILSRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAY-STGSDYAANIEKA 236 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 111/207 (53%), Gaps = 3/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPM 298 D I + P A +D+ N + P+ ARGIEVGHIF GT YS M Sbjct: 365 DDKHYFGINWERDLPLAQAADIRNVVEGEPTPDGLGTYAMARGIEVGHIFQLGTNYSKSM 424 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 +AT +GK + MG YG+G R+VAA IE + D +GI+WP+++APF + ++ + Sbjct: 425 NATVLDENGKSQVLLMGCYGVGVSRIVAAAIEQNFDDRGIVWPEAIAPFSVGILPMNMHK 484 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D E++Y LS G +V DD E+ G FA +L+G P V++G + + E Sbjct: 485 SHRVTDIAEQLYKDLSAAGIEVLLDDRKERPGVMFADMELIGIPHTVVIGDRNIDAGVFE 544 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSN 444 K+R TG ++D+ ++++++ + + Sbjct: 545 YKNRRTGEKQDIPFDQLVDFLKNAVKS 571 >gi|37524693|ref|NP_928037.1| prolyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii TTO1] gi|81834075|sp|Q7N8M7|SYP_PHOLL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|36784118|emb|CAE12987.1| prolyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii TTO1] Length = 572 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 130/293 (44%), Positives = 174/293 (59%), Gaps = 3/293 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SHKLMLR GMI + + G+Y+W+P G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVVSHKLMLRAGMIRKLASGLYNWMPTGIRVLKKVEKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N TGAIE+S+P +Q ADLW ESGR++ YG E+LR DR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNTGAIEISMPVVQPADLWQESGRWEQYGPELLRFVDRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP T +QIQ KFRDE+RPRFGVMRSREFLMKDAYSF T + +Y+ M+ + Sbjct: 121 EVSSYKQLPLTLFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHATQTSLQETYDNMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC---SKDFMDFPIPSENT 237 Y +IF R+GL + A++G IGG SHEF VLA +GE + S + + Sbjct: 181 YSKIFTRIGLDFRAVLADTGSIGGSASHEFQVLAASGEDDIVFSTESNYAANIELAEAVA 240 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 D + P A T E+ + + + G Sbjct: 241 PAHDRAVPTEDMHLVDTPNAKTIAELVEQFNLPIEKTVKTLMVHAAEGTSHKL 293 Score = 186 bits (473), Expect = 5e-45, Method: Composition-based stats. Identities = 78/191 (40%), Positives = 116/191 (60%), Gaps = 3/191 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D+ P+ K + RGIEVGHIF GTKYS M AT +G DG + V Sbjct: 380 PVPEVADIRNVVEGDASPDGKGTLLIKRGIEVGHIFQLGTKYSDAMKATVQGEDGHNQIV 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG R+VAA IE +HD +GIIWPD++APF+++++ + H ++ EK+YA Sbjct: 440 TMGCYGIGVTRIVAAAIEQNHDDRGIIWPDAIAPFQVAILPMNMHKSYRVKEVAEKLYAD 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV +DD E+ G FA +L+G P V++G + + + +VE KHR ++ + L Sbjct: 500 LRASGIDVIFDDRKERPGVMFADMELIGVPHTVVIGDRNLDNGEVEYKHRRNDEKQMLKL 559 Query: 432 EEVINYASHRF 442 + V++Y + Sbjct: 560 DNVVDYLKQQL 570 >gi|238763953|ref|ZP_04624909.1| Prolyl-tRNA synthetase [Yersinia kristensenii ATCC 33638] gi|238697770|gb|EEP90531.1| Prolyl-tRNA synthetase [Yersinia kristensenii ATCC 33638] Length = 572 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 124/235 (52%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EINSYKQLPLNFFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+ L + A++G IGG SHEF VLAD+GE + D+ E Sbjct: 181 YSKIFSRMDLNFRAVLADTGSIGGSASHEFQVLADSGEDDIVF-STGSDYAANIE 234 Score = 173 bits (439), Expect = 5e-41, Method: Composition-based stats. Identities = 74/192 (38%), Positives = 112/192 (58%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ + + RGIEVGHIF GTKYS M AT +G DG++ + Sbjct: 380 PLPHIADLRNVVEGDISPDGQGTLLIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRNQVM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWPD++APF+++++ + H ++ E++Y Sbjct: 440 TMGCYGIGVSRVVAAAIEQNHDDRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYTT 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P V++G + + +VE K+R G + + Sbjct: 500 LRAHGIDVILDDRKERPGVMFADMELIGVPHNVVIGDRNLDSEEVEYKNRRAGEKHMIKT 559 Query: 432 EEVINYASHRFS 443 E+I++ + Sbjct: 560 SEIIDFLLSQIK 571 >gi|167648480|ref|YP_001686143.1| threonyl-tRNA synthetase [Caulobacter sp. K31] gi|189083602|sp|B0T0Z7|SYT_CAUSK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|167350910|gb|ABZ73645.1| threonyl-tRNA synthetase [Caulobacter sp. K31] Length = 659 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 74/435 (17%), Positives = 142/435 (32%), Gaps = 39/435 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 I + RD + L I + KG+ W P G + A +R + G E Sbjct: 241 RIEEAERRDHRKLGKTMDLF--HIQEEGKGMVFWHPKGWTLYLALEAYMRRRLDAAGYRE 298 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 + P + LW SG + +G M + + P + IF KSYR L Sbjct: 299 VKTPQILDKSLWERSGHAEKFGHAMFMCESAEGEVLAVKPMNCPGHIQIFNVGQKSYREL 358 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P + R E G+MR R F DA+ F + ++ S + ++ Sbjct: 359 PLRMAEFGACHRYEPSGAMHGIMRVRAFTQDDAHIFCREEQVTEES-ARFIELLRSVYSD 417 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 LG+ + + P D + + + Sbjct: 418 LGMHLADTKFSTRPELR-----------------AGEDAVWDKAEAALSAAAEAAGETLV 460 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 + E A Y + L D++ + ++ F + + A + DG Sbjct: 461 LQEGEGAFYGPKLEF---SLKDAIGRVWQCGTLQLD----FVLPER----LDAEYVAEDG 509 Query: 308 KDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + +G+ ++ ++ G +W V ++ D + Sbjct: 510 SKKRPVMLHRAILGSFERFIGILLENYAGHLPLWLAPVQVVVATIT------SDADDYAQ 563 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 ++ RL+ +G D E+I + L P+ +VG K + +V ++ + Sbjct: 564 RVAERLTSMGIRAEVDFRNEKINYKIREHSLAKVPVIAVVGRKEAENGEVALRRLGGEGQ 623 Query: 427 EDMSLEEVINYASHR 441 + +SLE+ + + Sbjct: 624 KVLSLEDAVRALTEE 638 >gi|315222497|ref|ZP_07864386.1| threonyl-tRNA synthetase [Streptococcus anginosus F0211] gi|315188183|gb|EFU21909.1| threonyl-tRNA synthetase [Streptococcus anginosus F0211] Length = 650 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 164/441 (37%), Gaps = 33/441 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G V I + + Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISPEVGQGLPFWLPDGATIRRIVERYITDREV 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSH 121 G + P L S DL+ SG ++ Y ++M D D + P + +++++H Sbjct: 287 NDGYQHVYTPPLASVDLYKTSGHWEHYQEDMFPPMDMGDGEQFVLRPMNCPHHIEVYKNH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP ++ + R E ++ + + + PE + + + Sbjct: 347 VHSYRELPIRIAELGMMHRFEKSGALSGLQRVREMTLNDSHLFVMPEQIQEEFKHVLDLM 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ + R + + F + + + DD Sbjct: 407 IDVYKDFNITDYRFRLS-------------YRDPNDKHKYFDNDEMWENAQRMLKGAMDD 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y DV ++ +L + +S ++ F ++ L Sbjct: 454 LGLDYFEAEGEAAFYGPKLDV---QVKTALGNEETLSTIQLD----FLLPERFDLH---- 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G + + I + +P +AP ++++I I ++ Sbjct: 503 YIGADGEEHRPVMIHR--GIVSTMERFIAYLIETYKGAFPTWLAPHQVTVIPI--SNEAH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D K+ L G V D+ E++ + + P Q+IVG K +D V ++ Sbjct: 559 ADYAWKVAKELRNRGVRVDVDERNEKMQYKIRQSQTHKVPYQLIVGDKEQADGTVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRF 442 + ++ E +N+ Sbjct: 619 GSKQTHTETVAEFVNHILADI 639 >gi|282855610|ref|ZP_06264924.1| threonine--tRNA ligase [Pyramidobacter piscolens W5455] gi|282586540|gb|EFB91794.1| threonine--tRNA ligase [Pyramidobacter piscolens W5455] Length = 640 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 145/444 (32%), Gaps = 40/444 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + +H G + P G ++ + + R G Sbjct: 227 YITRMEEARRRDHRKLGKELDLFS--LHNEGVGFPFFHPKGMVVMNKLMSFWRRLHFLNG 284 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E P + + DLW+ SG +D Y + M +D P + I+++ SY Sbjct: 285 YTEARTPQILNRDLWLRSGHWDHYRENM-YFTTIDDIPHAIKPMNCPGGIIIYKTSKHSY 343 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP ++ + R EL G+MR R F DA+ F + Sbjct: 344 RELPIRMGELGVVHRHELSGALHGLMRVRCFTQDDAHHFCTPEQIKDE------------ 391 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + M+ ++ V T S + + + + + + Sbjct: 392 ------VKLIMKLNDYVYTHVFGFKYHVELSTRPENSMGSDELWEIAENALSETLAETGT 445 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y D H E R + G I T+ G Sbjct: 446 PYVLNPGDGAFYGPKIDFHLED----------CIGRTWQCGTI-QLDFTMPEKFDMTYVG 494 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG++H + +G++ ++ ++ G W V +++ Sbjct: 495 ADGREHRPVMLHRTILGSIERFMGILIENYAGAFPYWLAPVQVKLLAV------SDDHLP 548 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L + V D E++G + A + P +++G K V V ++ R Sbjct: 549 YAREVAEKLQNLNVRVEIDRRDEKLGRKIRDAQMEKVPYMLVIGDKEVEARTVAVRDRAK 608 Query: 424 GIREDMSLEEVINYASHRFSNNRP 447 G M + ++ + Sbjct: 609 GDLGSMDFAAFTGLLAEQYDPEKE 632 >gi|17547535|ref|NP_520937.1| prolyl-tRNA synthetase [Ralstonia solanacearum GMI1000] gi|81849506|sp|Q8XVL4|SYP_RALSO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|17429839|emb|CAD16523.1| probable prolyl-trna synthetase protein [Ralstonia solanacearum GMI1000] Length = 574 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 119/235 (50%), Positives = 164/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + G+Y+++P+G + + V I+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGLYTYMPVGLRVIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N +GA+E+ +P +Q A+LW E+GR+D G EM+R+ DR+++ ++ PT EEV+TDI R+ Sbjct: 61 MNASGAVEVLMPVVQPAELWQETGRWDKMGDEMMRVKDRHERDLVIQPTSEEVVTDIART 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ +P FYQIQ KFRDE RPRFG+MR REF MKDAYSFD EG K SY KM+ + Sbjct: 121 EIRSYKQMPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDAEGLKVSYEKMYGA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R GL+ + A++G IGG SHEF V+ADTGE + D+ E Sbjct: 181 YTRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIADTGEDAIVY-SPDSDYAANIE 234 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 69/172 (40%), Positives = 102/172 (59%), Gaps = 3/172 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A D+ N D P+ K RGIEVGH+F GT+YS MSATF +GK + Sbjct: 382 PEAEVYDLRNVVEGDPSPDGKGTLAICRGIEVGHVFMLGTRYSESMSATFLDENGKTQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE ++D +GIIWP S+APF++ + + + R ++++A Sbjct: 442 MMGCYGIGITRILGAAIEQNYDARGIIWPVSIAPFEVVICPVGYDRSEAVRAEADRLHAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 L+ G DV DD GE+ G+ FA +L+G P +V+VG + + D K+E++ R Sbjct: 502 LAAAGIDVILDDRGERPGAMFADWELIGVPFRVVVGERGLKDGKLELQGRRD 553 >gi|94265181|ref|ZP_01288943.1| Prolyl-tRNA synthetase [delta proteobacterium MLMS-1] gi|93454322|gb|EAT04629.1| Prolyl-tRNA synthetase [delta proteobacterium MLMS-1] Length = 572 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 124/250 (49%), Positives = 161/250 (64%), Gaps = 1/250 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ LP L+E+P +AE+ SHKLMLR GMI + + G+YS+LPLG A+ V I+R+E Sbjct: 1 MRFSQLLLPTLKEDPAEAEVISHKLMLRAGMIRKLTSGVYSYLPLGLAAIRKVEEIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P +Q ADLW ESGR++ YG E+LR DR+ + GPTHEEV+TD+ R Sbjct: 61 MNRAGAQELLLPMVQPADLWRESGRWEKYGPELLRFQDRHQRESCLGPTHEEVITDLVRL 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++ SYR+LP YQIQ KFRDE+RPRFG+MR REF+MKD YSFD + +Y KM + Sbjct: 121 NVHSYRDLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFDADEAAADETYRKMQAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GL + A++G IGG SHEF+VLA TGE V + D+ E Sbjct: 181 YQRIFARCGLAFRAVEADTGSIGGSFSHEFMVLAATGEDLVVTCQHC-DYAANLEKATAR 239 Query: 241 DIISLNSIVE 250 S Sbjct: 240 QQQSPEHDDP 249 Score = 164 bits (415), Expect = 3e-38, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 106/193 (54%), Gaps = 2/193 (1%) Query: 257 AATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A + D+ D+ P + RGIEVGHIF G +YS ++ATF +G+ + M Sbjct: 377 AYSGDIRMVTEDDNCPRCDGRLAMTRGIEVGHIFKLGNEYSRALNATFLDKEGQSRHFIM 436 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G +GIG R VAA IE +HD GII+P +APF++ L+N+ D +++Y L+ Sbjct: 437 GCFGIGVSRTVAAAIEQNHDRDGIIFPLPIAPFQVILLNLTPKDPEISAEAQRLYQELTA 496 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G++F ADL+G P++++VG +F + +EI++R G + + Sbjct: 497 AGLEVLLDDRNERPGAKFKDADLIGIPIRLMVGKRFAQEGLLEIRNRADGRSSEATPAAA 556 Query: 435 INYASHRFSNNRP 447 + + + P Sbjct: 557 VAVITEMVAQQLP 569 >gi|94267977|ref|ZP_01291052.1| Prolyl-tRNA synthetase [delta proteobacterium MLMS-1] gi|93451782|gb|EAT02540.1| Prolyl-tRNA synthetase [delta proteobacterium MLMS-1] Length = 572 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 124/250 (49%), Positives = 161/250 (64%), Gaps = 1/250 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ LP L+E+P +AE+ SHKLMLR GMI + + G+YS+LPLG A+ V I+R+E Sbjct: 1 MRFSQLLLPTLKEDPAEAEVISHKLMLRAGMIRKLTSGVYSYLPLGLAAIRKVEEIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P +Q ADLW ESGR++ YG E+LR DR+ + GPTHEEV+TD+ R Sbjct: 61 MNRAGAQELLLPMVQPADLWRESGRWEKYGPELLRFQDRHQRESCLGPTHEEVITDLVRL 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++ SYR+LP YQIQ KFRDE+RPRFG+MR REF+MKD YSFD + +Y KM + Sbjct: 121 NVHSYRDLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFDADEAAADETYRKMQAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GL + A++G IGG SHEF+VLA TGE V + D+ E Sbjct: 181 YQRIFARCGLAFRAVEADTGSIGGSFSHEFMVLAATGEDLVVTCQHC-DYAANLEKATAR 239 Query: 241 DIISLNSIVE 250 S Sbjct: 240 QQQSPEHDDP 249 Score = 163 bits (413), Expect = 5e-38, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 106/193 (54%), Gaps = 2/193 (1%) Query: 257 AATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A + D+ D+ P + RGIEVGHIF G +YS ++ATF +G+ + M Sbjct: 377 AYSGDIRMVTEDDNCPRCDGRLAMTRGIEVGHIFKLGNEYSRALNATFLDKEGQSRHFIM 436 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G +GIG R VAA IE +HD GII+P +APF++ L+N+ D +++Y L+ Sbjct: 437 GCFGIGVSRTVAAAIEQNHDRDGIIFPLPIAPFQVILLNLTPKDPEISAEAQRLYRELTA 496 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G++F ADL+G P++++VG +F + +EI++R G + + Sbjct: 497 AGLEVLLDDRNERPGAKFKDADLIGIPIRLMVGKRFAQEGLLEIRNRADGRSSEATPAAA 556 Query: 435 INYASHRFSNNRP 447 + + + P Sbjct: 557 VAVITEMVAQQLP 569 >gi|269123175|ref|YP_003305752.1| threonyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112] gi|268314501|gb|ACZ00875.1| threonyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112] Length = 633 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 78/442 (17%), Positives = 160/442 (36%), Gaps = 44/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L I +H G ++P G + + + + R E N+ G Sbjct: 229 YIKQVEEAEKRDHRKLGKQLNLF--FIDEHGPGFPFFMPKGMRLFNRLQQLWRIEHNKQG 286 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + +LW SG + +Y + M +++ ++K P + +++++ SY Sbjct: 287 YDEIRTPIMLDKELWEISGHWFNYRENM-YVSEIDEKVYAIKPMNCPGSIIAYKNNLHSY 345 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 ++LP + ++ R E G+MR R F DA+ F TP+ K S ++ Y + Sbjct: 346 KDLPLKYAEMGHVHRHEFSGALHGLMRVRAFTQDDAHVFC-TPDQIKDSIKEIVNLYDKY 404 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G +F V T + + + ++ Sbjct: 405 YKLFG------------------FDFHVELSTKPEKAVGDAKVWEISERALEETLKELNI 446 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I A Y D K+ DS+ + +++ + ++ G Sbjct: 447 DYRINAGDGAFYGPKIDF---KMKDSIGRIWQTGTIQLDMNLP--------KRFNMSYIG 495 Query: 305 ADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG+ H M + R + +IE + + Sbjct: 496 KDGEKHETVMIHRAMFGSLERFIGILIEHYAGAFPVWLAPTQVKIMTI-------SAEQV 548 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEIKHR 421 + K++ +L +G D E+IG + A+ P+Q+++G V ++ V ++ Sbjct: 549 EYATKLHKKLIDLGIYSELDIRDEKIGYKIREANGEQKIPVQLVIGKNEVLENTVNVRRF 608 Query: 422 LTGIREDMSLEEVINYASHRFS 443 + +++E IN + Sbjct: 609 GSTDSVTKNVDEFINELLDEIN 630 >gi|163788630|ref|ZP_02183075.1| N-acetylmuramic acid-6-phosphate etherase [Flavobacteriales bacterium ALC-1] gi|159875867|gb|EDP69926.1| N-acetylmuramic acid-6-phosphate etherase [Flavobacteriales bacterium ALC-1] Length = 646 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 157/443 (35%), Gaps = 37/443 (8%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L T + +G+ WLP G + + ++ Q + G Sbjct: 231 LHLLEEAKKRDHRKLGKELELFT-FSQKVGQGLPLWLPKGAALRERLENFLKAAQKKAGY 289 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 + P + +L+V SG Y YG++ + + D+ + P + +I+ + S Sbjct: 290 EMVVTPHIGQKELYVTSGHYAKYGEDSFQPIKTPKEDEEFLLKPMNCPHHCEIYNNKPYS 349 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 Y+ LP F + +R E G+ R R F DA+ F TP+ + ++ L Sbjct: 350 YKELPKRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFC-TPDQLDAEFKEVIDLVLY 408 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 +F LG + + + ++ + D Sbjct: 409 VFGSLGFEDFTAQVSLRDPES-------------PDKYIGDEEHWKKAEDAILNAAIDKG 455 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y D + D+L ++ ++ T+K Sbjct: 456 LNYVVETGEAAFYGPKLDFM---VRDALGRQWQLGTIQVDYTLP--------ERFDLTYK 504 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G+D + H + G+M A++ G +W IS+ + Sbjct: 505 GSDNELHRPVMIHRAPFGSMERFIAILLEHTGGNFPLWLMPEQAIIISI------SEKYE 558 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 EK+ L D+ E +G + A++ FP +IVG + D+ + ++ Sbjct: 559 KYAEKVLNLLENDEIRALADNRNETVGKKIREAEMQKFPFMIIVGEQEAQDNTITVRQHG 618 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 +++++ +N R + + Sbjct: 619 GEDLGTITVKDFVNIVKDRINKS 641 >gi|121601812|ref|YP_988945.1| threonyl-tRNA synthetase [Bartonella bacilliformis KC583] gi|166223323|sp|A1USJ2|SYT_BARBK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|120613989|gb|ABM44590.1| threonyl-tRNA synthetase [Bartonella bacilliformis KC583] Length = 658 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 149/445 (33%), Gaps = 39/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD ++ L + G+ W P G K N+ + +R + Sbjct: 233 KAYLNMLEEAEKRDHRRLGREMDLF--HFQEEGPGMIFWHPKGWKMFQNLVSYMRRRLDE 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD-----RNDKAMIYGPTHEEVMTDIF 118 E++ P + LW SG + Y + M + ++ P + IF Sbjct: 291 HKYDEVNAPQVLDKSLWETSGHWGWYQENMFKTIPATNDWNDEHVYALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + L R E G+MR R F DA+ F + + Sbjct: 351 KHGLKSYRDLPIRLAEFGLLHRYEPSGSLHGLMRVRSFTQDDAHVFCTDEQLADECLKIN 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L + G + I ++ + P S E A+ V K T Sbjct: 411 -DLILSTYADFGFEEIILKLSTRPEKRVGSDELWDHAENIMMSVL--KTIEKEAKGRIKT 467 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 ++ A Y + L D++ + ++ F ++ Sbjct: 468 SI---------LQGEGAFYGPKFEY---TLKDAIGREWQCGTTQVD----FNLPERF--- 508 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + D + + G+M ++ + G +W I + Sbjct: 509 -EVFYINRDSEKCQPVMIHRAIFGSMERFLGILIENFAGHMPLW------LAPQQIVVTT 561 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + EKI A+L G D E+I + L P+ ++ G + + V Sbjct: 562 ITSEANEYAEKITAKLKASGLSAVSDLRSEKINYKIREHSLQKVPVILVCGKRESETNSV 621 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + + + +++ I ++ Sbjct: 622 NMRRLGSMNQISLPIDQAIKQLTNE 646 >gi|330995385|ref|ZP_08319295.1| threonine--tRNA ligase [Paraprevotella xylaniphila YIT 11841] gi|329575880|gb|EGG57404.1| threonine--tRNA ligase [Paraprevotella xylaniphila YIT 11841] Length = 647 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 83/445 (18%), Positives = 151/445 (33%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD ++ L + KG+ WLP G + +++ Q R Sbjct: 231 EYLTLLEEAKKRDHRKIGKEMELFM-FSERVGKGLPMWLPKGTALRLRLEDFLKKIQKRY 289 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 G ++ P + +L+V SG Y YGK+ + D+ + P + +I+ Sbjct: 290 GYQQVMTPHIGGKNLYVTSGHYAHYGKDSFQPIHTPEADEEYMLKPMNCPHHCEIYAWKP 349 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + +R E G+ R R F DA+ F + M Sbjct: 350 RSYKDLPLRIAEFGTVYRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFIRVM---- 405 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G + D I L D + + D + + + Sbjct: 406 -----------EIIQIIFGALNFDTFEAQISLRDPNNREKYIGSDEVWEEAENAIIEACK 454 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 LN+ VE A Y D + D+L ++ ++ Sbjct: 455 EKGLNAKVEYGEAAFYGPKLDFM---VKDALGRRWQLGTIQVDYNLP--------ERFKL 503 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G D + H + G+M AV+ G +W + I + Sbjct: 504 EYTGEDNQKHRPVMIHRAPFGSMERFCAVLIEHTAGHFPLW------LTPDQVAILPISE 557 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D K+ A + DD E+IG + ++ P +IVG K +D V ++ Sbjct: 558 KFNDYAHKLCAYFDERDVRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAADGTVSVR 617 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M E+ + N Sbjct: 618 KQGEGDQGSMKFEDFAKKINEEVRN 642 >gi|83746821|ref|ZP_00943869.1| Prolyl-tRNA synthetase [Ralstonia solanacearum UW551] gi|83726590|gb|EAP73720.1| Prolyl-tRNA synthetase [Ralstonia solanacearum UW551] Length = 626 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 127/277 (45%), Positives = 176/277 (63%), Gaps = 5/277 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G +A+ V I+REE Sbjct: 53 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGIYTYMPVGLRAIRKVEQIVREE 112 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+EM +P +Q +LW E+GR+D G+E++R+ DR+++ ++ PT EEV+TDI R+ Sbjct: 113 MNAAGAVEMLMPVVQPGELWQETGRWDKMGEELMRVKDRHERDLVIQPTSEEVVTDIART 172 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ +P FYQIQ KFRDE RPRFG+MR REF MKDAYSFD EG K SY KMF + Sbjct: 173 EIRSYKQMPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDVEGMKVSYQKMFDA 232 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GL + A++G IGG SHEF V+A+TGE + D+ E + Sbjct: 233 YTRIFQRFGLAFRAVAADNGAIGGSGSHEFHVIAETGEDAIVY-SPESDYAANIEAAEAL 291 Query: 241 DIISLNSIVEQWTA----PYAATSDVHNEKLFDSLPE 273 + S + A P A + E+L +L Sbjct: 292 VPAAPRSPAAEPLAKTPTPGRAKCEAVAEQLGIALQR 328 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 68/172 (39%), Positives = 102/172 (59%), Gaps = 3/172 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N D P+ K RGIEVGH+F GT+YS MSATF +GK + Sbjct: 434 PEAEVADLRNVVEGDPSPDGKGSLAICRGIEVGHVFMLGTRYSESMSATFLDENGKTQPM 493 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE ++D +GIIWP S+APF++ + + + R ++++A Sbjct: 494 VMGCYGIGITRILGAAIEQNYDARGIIWPVSIAPFEVVICPVGYDRSEAVRAEADRLHAE 553 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 L+ G DV DD GE+ G FA +L+G P +V+VG + + + K+E++ R Sbjct: 554 LAAAGIDVILDDRGERPGVMFADWELIGVPFRVVVGERGLKEGKLELQGRRD 605 >gi|257869188|ref|ZP_05648841.1| threonyl-tRNA synthetase [Enterococcus gallinarum EG2] gi|257803352|gb|EEV32174.1| threonyl-tRNA synthetase [Enterococcus gallinarum EG2] Length = 646 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 75/441 (17%), Positives = 159/441 (36%), Gaps = 30/441 (6%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 F+ + +E RD +L L + + G+ WLP G + I +++ G Sbjct: 231 FIRLREEAKERDHRKLGKELDLFM-LSPEVGAGLPFWLPKGATIRRTIERYIVDKEVSLG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKS 124 + P + + DL+ SG +D Y ++M D D M + P + ++++ I S Sbjct: 290 YQHVYTPIMANVDLYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIHS 349 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR LP ++ + R E ++ + + + P+ K + + + + Sbjct: 350 YRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLDLMVEV 409 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + R + + F + D++ Sbjct: 410 YKDFNVTDYRFRLS-------------YRDPENKDKYFDDDAMWENAQTMLKAAMDELNL 456 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV ++ +L + +S ++ F ++ T+ G Sbjct: 457 DYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTYVG 505 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG++ + + + G + + + + +P +AP + ++I + D Sbjct: 506 EDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV--DAHSDY 562 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +I RL G V DD E++G + + + P Q++VG + V D+ V I+ + Sbjct: 563 AYEIKERLQSQGLRVEVDDRNEKMGYKIRASQMQKIPYQLVVGDQEVKDATVNIRRYGSK 622 Query: 425 IREDMSLEEVINYASHRFSNN 445 L ++ + N Sbjct: 623 ETNVEELNIFVDAMAAEVKNY 643 >gi|127512960|ref|YP_001094157.1| threonyl-tRNA synthetase [Shewanella loihica PV-4] gi|166225499|sp|A3QEK0|SYT_SHELP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|126638255|gb|ABO23898.1| threonyl-tRNA synthetase [Shewanella loihica PV-4] Length = 642 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 69/439 (15%), Positives = 138/439 (31%), Gaps = 40/439 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + + + G+ W G + IR++ + Sbjct: 233 LTRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWSLFLELERFIRQKLGQYTY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y + M ++ P + IF +KSYR Sbjct: 291 QEVKGPLMMDRVLWERSGHWDKYSEAMFT-THSENREYAVKPMNCPGHVQIFNQGLKSYR 349 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F + + + + Sbjct: 350 DLPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVQQE-VSGCIKMVYDTY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G I ++ + P D + Sbjct: 409 ATFGFHDIVVKLSTRPEKR-----------------IGDDAMWDRAEQALMDALKANDIE 451 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I+ A Y + L D L + ++ G AT+ Sbjct: 452 YEILPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDYALPGRLG--------ATYVAE 500 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D + +G++ ++ + +P +AP + ++NI + Sbjct: 501 DNSRQTPVMIHRAILGSLERFLGILI---EEYAGKFPTWLAPVQAVVMNITDK---QSEY 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ G D E+IG + L P ++VG + + + +V ++ R Sbjct: 555 VDEVVKLFKDQGIRASKDLRNEKIGFKIREHTLRRVPYLLVVGDQEMENREVAVRTRDGV 614 Query: 425 IREDMSLEEVINYASHRFS 443 + +++ + S Sbjct: 615 DLGKIKIDQFAAMVKEQIS 633 >gi|319938817|ref|ZP_08013181.1| threonyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV] gi|319811867|gb|EFW08133.1| threonyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV] Length = 650 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 81/442 (18%), Positives = 164/442 (37%), Gaps = 33/442 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G V I + + Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISPEVGQGLPFWLPDGATIRRIVERYITDREV 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSH 121 G + P L S +L+ SG ++ Y ++M D D + P + +++++H Sbjct: 287 NDGYQHVYTPPLASVELYKTSGHWEHYQEDMFPPMDMGDGEQFVLRPMNCPHHIEVYKNH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP ++ + R E ++ + + + PE + + + Sbjct: 347 VHSYRELPIRIAELGMMHRFEKSGALSGLQRVREMTLNDSHLFVMPEQIQEEFKHVLDLM 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ + R + + F + + + DD Sbjct: 407 IDVYKDFNITDYRFRLS-------------YRDPNDKHKYFDNDEMWENAQRMLKGAMDD 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y DV ++ +L + +S ++ F ++ L Sbjct: 454 LGLDYFEAEGEAAFYGPKLDV---QVKTALGNEETLSTIQLD----FLLPERFDLH---- 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG++H M G + + I + +P +AP ++++I I ++ Sbjct: 503 YVGADGEEHRPVMIHR--GIVSTMERFIAYLIETYKGAFPTWLAPHQVTVIPI--SNEAH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D K+ L G V D+ E++ + + P Q+IVG K +D V ++ Sbjct: 559 ADYAWKVAKELRNRGVRVDVDERNEKMQYKIRQSQTHKVPYQLIVGDKEQADGTVNVRRY 618 Query: 422 LTGIREDMSLEEVINYASHRFS 443 ++ E +N+ + Sbjct: 619 GQKQTHTETIAEFVNHILADIA 640 >gi|254253311|ref|ZP_04946629.1| Prolyl-tRNA synthetase [Burkholderia dolosa AUO158] gi|124895920|gb|EAY69800.1| Prolyl-tRNA synthetase [Burkholderia dolosa AUO158] Length = 578 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 137/288 (47%), Positives = 183/288 (63%), Gaps = 5/288 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPIGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD G SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDAAGLDESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y+RIF RLGL+ + A+SG IGG+ SHEF V+ADTGE + DF E + Sbjct: 181 YVRIFTRLGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYCPT-SDFAANVEAAEAL 239 Query: 240 ---DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 + + +++ P A + E L L + + Sbjct: 240 PLIAERAAPVEALQKVATPGKAKCEAVAELLNIPLERTIKSIVLATDN 287 Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 73/179 (40%), Positives = 101/179 (56%), Gaps = 3/179 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +DV N K D P+ K V RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPDVADVRNVKKGDPSPDGKGVIDICRGIEVGHVFQLGTKYSEAMGATFLDESGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YG+G R++ A IE + D KGIIWP+S+APF++ L + R+A +K+YA Sbjct: 442 LMGCYGVGITRILGAAIEQNFDDKGIIWPESIAPFEVVLCPMGYDRSDAVREAADKLYAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L G DV DD GE+ G FA +L+G P +V++G + + + K+E + R + Sbjct: 502 LVAAGIDVILDDRGERPGVMFADWELIGVPHRVVIGERGLKEGKIEYQGRRDTEATLLP 560 >gi|319426918|gb|ADV54992.1| prolyl-tRNA synthetase [Shewanella putrefaciens 200] Length = 571 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 121/237 (51%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YS+LP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSYLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLWVE+GR+D +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPMVQPADLWVETGRWDKFGPELLRFKDRHNRDFVLGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MRSREFLMKDAYSF L + +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGMMRSREFLMKDAYSFHLDVDTMNEAYEAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y I R+GL P+ A++G IGG +SHEF VLA +GE + D+ E Sbjct: 181 YSNILSRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAY-STGSDYAANIEKA 236 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 111/207 (53%), Gaps = 3/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPM 298 D I + P A +D+ N + P+ ARGIEVGHIF GT YS M Sbjct: 365 DDKHYFGINWERDLPLAQAADIRNVVEGEPTPDGLGTYAMARGIEVGHIFQLGTNYSKSM 424 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 +AT +GK + MG YG+G R+VAA IE + D +GI+WP+++APF + ++ + Sbjct: 425 NATVLDENGKSQVLLMGCYGVGVSRIVAAAIEQNFDDRGIVWPEAIAPFSVGILPMNMHK 484 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D E++Y LS G +V DD E+ G FA +L+G P V++G + + E Sbjct: 485 SHRVTDIAEQLYKDLSAAGIEVLLDDRKERPGVMFADMELIGIPHTVVIGDRNIDAGVFE 544 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSN 444 K+R TG ++D+ ++++++ + + Sbjct: 545 YKNRRTGEKQDIPFDQLVDFLKNAVKS 571 >gi|304312891|ref|YP_003812489.1| Prolyl-tRNA synthetase [gamma proteobacterium HdN1] gi|301798624|emb|CBL46856.1| Prolyl-tRNA synthetase [gamma proteobacterium HdN1] Length = 574 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 120/243 (49%), Positives = 165/243 (67%), Gaps = 1/243 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E+P DAE+ SHKLMLR GMI + + G+Y+W P G + L V I+REE Sbjct: 1 MRASQYLLATLREDPADAEVISHKLMLRAGMIRRLAAGLYTWTPTGLRVLRKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P Q A+LW ESGR+ +YG E+LR DR+ + + GPTHEEV++D+ R+ Sbjct: 61 MDRAGAQEVLMPVTQPAELWQESGRFQAYGPELLRFKDRHARDFVLGPTHEEVISDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY+ LP FYQIQ KFRDE RPRFGVMR+REFLMKD+YSF +T + + +Y M+ + Sbjct: 121 NVQSYKQLPANFYQIQTKFRDETRPRFGVMRAREFLMKDSYSFHMTEDCLRETYQVMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL+ + A++G IGG+ SHEF VLA GE + + D+ E + Sbjct: 181 YTAIFTRLGLEFRAVLADTGSIGGNNSHEFHVLASAGEDSIAF-SNQSDYAANIEMAEAT 239 Query: 241 DII 243 I Sbjct: 240 LIG 242 Score = 180 bits (456), Expect = 5e-43, Method: Composition-based stats. Identities = 77/193 (39%), Positives = 114/193 (59%), Gaps = 3/193 (1%) Query: 253 TAPYAATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A +A +D+ N D P+ K + RGIEVGHIF GTKYS ++ T +GK Sbjct: 379 DANFAEVADLRNVVEGDPSPDGKGEILIRRGIEVGHIFQLGTKYSKALNVTVLDENGKSQ 438 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIY 369 + MG YGIG RVVAA IE ++D +GIIWPD++APF I+LI + A E +Y Sbjct: 439 VLPMGCYGIGVSRVVAAAIEQNNDAQGIIWPDAIAPFHIALIPMNQHKSPRVHAAAEALY 498 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 RL + G +VF+DD E+ G +FA A+L+G P ++++G + + +VE KHR D+ Sbjct: 499 ERLKQAGYEVFYDDRKERPGVKFADAELIGIPHRIVIGDRGLDQQQVEYKHRTDKETSDV 558 Query: 430 SLEEVINYASHRF 442 L++++ + R Sbjct: 559 GLDQLVEFLQTRV 571 >gi|172059576|ref|YP_001807228.1| prolyl-tRNA synthetase [Burkholderia ambifaria MC40-6] gi|226699123|sp|B1YSV1|SYP_BURA4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|171992093|gb|ACB63012.1| prolyl-tRNA synthetase [Burkholderia ambifaria MC40-6] Length = 578 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 139/288 (48%), Positives = 182/288 (63%), Gaps = 5/288 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD G SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDTAGLNESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y+RIF RLGL+ + A+SG IGG+ SHEF V+ADTGE + DF E + Sbjct: 181 YVRIFTRLGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYCPT-SDFAANIEAAEAL 239 Query: 240 ---DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 + +E+ P A + E L L + E Sbjct: 240 PLIAARAAPAEAMEKVATPGKAKCEAVAELLAIPLERTIKSIVLATEN 287 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 106/192 (55%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +DV + K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPEVADVRDVKKGDPSPDGKGTIDICRGIEVGHVFQLGTKYSEAMGATFLDESGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YG+G R++ A IE + D +GIIWP+S+APF++ L + + R+A +K+YA Sbjct: 442 LMGCYGVGVTRILGAAIEQNFDDRGIIWPESIAPFEVVLCPMGYDRSDMVREAADKLYAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G DV DD GE+ G FA +L+G P ++++G + + + K+E + R + Sbjct: 502 LAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKEGKIEYQGRRDAEATLLPA 561 Query: 432 EEVINYASHRFS 443 +E + + Sbjct: 562 DEAAATVTEKIR 573 >gi|167623946|ref|YP_001674240.1| threonyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4] gi|189083622|sp|B0TT20|SYT_SHEHH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|167353968|gb|ABZ76581.1| threonyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4] Length = 642 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 75/439 (17%), Positives = 143/439 (32%), Gaps = 40/439 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + + + G+ W G + IR++ + Sbjct: 233 LNRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWSLFLELEKFIRQKLGQYTY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M ++ P + IF +KSYR Sbjct: 291 QEVKGPLMMDRVLWERSGHWDKYSDAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYR 349 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F + + + + Y Sbjct: 350 DLPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVQQEVSACIRMVYDTYA 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G +I ++ + P D D + Sbjct: 410 T-FGFSNIVVKLSTRPEKR-----------------IGDDDMWDRAEEALKKALKANDIE 451 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I+ A Y + L D L + ++ G AT+ Sbjct: 452 FEILPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDYALPGRLG--------ATYVAE 500 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D + +G++ ++ + +P ++P ++ ++NI D Sbjct: 501 DNSRQTPVMIHRAILGSLERFLGILI---EEYAGKFPAWLSPVQVVVMNITDK---QSDY 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + + G D E+IG + L P ++VG + + +++V ++ R Sbjct: 555 VDNVVNLFKEHGIRATKDLRNEKIGFKIREHTLRRVPYLLVVGDQEMENNEVAVRTREGV 614 Query: 425 IREDMSLEEVINYASHRFS 443 M LEE ++ S Sbjct: 615 DLGKMQLEEFATKLKNQIS 633 >gi|182679322|ref|YP_001833468.1| threonyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039] gi|182635205|gb|ACB95979.1| threonyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039] Length = 644 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 82/438 (18%), Positives = 151/438 (34%), Gaps = 38/438 (8%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E RD ++ L + G W P G + + +R Q G Sbjct: 232 YLKQLEEAEKRDHRRLGREMDLF--HFQEEGPGTVFWHPKGWTLFQTLISYMRRRQQEAG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E++ P + LW SG + +Y + M +++ P + IF++ +KSY Sbjct: 290 YVEVNTPQVLDRALWETSGHWSTYRENMFITTTEDERVFALKPMNCPGHVQIFKNGLKSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R E GVMR R F DA+ F + L I Sbjct: 350 RDLPLKIAEFGVVHRYEPSGALHGVMRVRAFTQDDAHIFCTEDQIMDEVLKIN-DLILSI 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E A+ T+V E Sbjct: 409 YRDFGFEDIVIKLSTRPEKRVGSDEAWDKAEAALTRVL------------EKLGNQFKTG 456 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 +N A Y + L D++ + ++ FG A + Sbjct: 457 IN---PGEGAFYGPKLEY---TLRDAIGREWQCGTTQVDFNLPGRFG--------AFYIA 502 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G V + G++ ++ + G +W + ++ Q D Sbjct: 503 PEGDKTVPVMIHRAMFGSLERFTGILIEHYAGHLPLWLSPLQIVVATIT------QEGDD 556 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ A K G V D E+I + L P+ ++G K ++ V I+ + Sbjct: 557 YAYEVMAAARKRGLRVDGDLRNEKITYKVREHSLAKVPVLFVLGKKEAAERTVSIRRLGS 616 Query: 424 GIREDMSLEEVINYASHR 441 + + LE+ + + Sbjct: 617 NDQISLGLEQALELLAAE 634 >gi|82701584|ref|YP_411150.1| prolyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196] gi|114152221|sp|Q2YBW3|SYP_NITMU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|82409649|gb|ABB73758.1| prolyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196] Length = 569 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S +F+ L+E P +AE+ SHKLMLR G+I + G+Y+W+PLG K L V I+REE Sbjct: 1 MRASGFFISTLKEAPAEAELISHKLMLRAGIIRRLGSGLYTWMPLGLKVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW E+GR+D +G +ML++ DR+++ +GPTHEEV+TDI R Sbjct: 61 MDAAGALELLMPAVQPAELWRETGRWDVFGPQMLKIRDRHERDFCFGPTHEEVITDIARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M V+ Sbjct: 121 EIKSYRQLPLNFYQIQTKFRDEVRPRFGVMRAREFVMKDAYSFHTDIPSLEETYQAMHVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGLK P++A++G IGG SHEF VLAD+GE + D D+ E Sbjct: 181 YCRIFDRLGLKFRPVKADTGAIGGSSSHEFHVLADSGEDAIAFCSD-SDYAANVE 234 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 70/186 (37%), Positives = 104/186 (55%), Gaps = 3/186 (1%) Query: 261 DVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P+ K RGIEVGHIF TKYS M A + G+ ++MG YG Sbjct: 382 DIRNVVSGDLSPDGKGKLEICRGIEVGHIFQLLTKYSEAMKANYLDESGQARPMEMGCYG 441 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGC 377 IG R+VAA IE +HD +GII+P ++APF++ +I I + R EK+YA LS VG Sbjct: 442 IGVSRIVAAAIEQNHDERGIIFPAAMAPFQVVIIPIGLKKNAEVRAEAEKLYATLSSVGI 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V DD ++ G FA +L+G P +V+VG + + + E + R E + L E+ ++ Sbjct: 502 EVLLDDRDDRPGVMFADMELIGIPHRVVVGERGLKEGNAEYRGRRDEKSEVVPLPEIADF 561 Query: 438 ASHRFS 443 + + Sbjct: 562 IKSKLA 567 >gi|227122|prf||1614347A Pro-tRNA synthetase Length = 572 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 124/235 (52%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+L++R GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLIVRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGQASHEFQVLAQSGEDDVVFSDT-SDYAANIE 234 Score = 174 bits (441), Expect = 3e-41, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 383 EVADIRNVVAGDPSPDGQGRLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 443 CTGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++ Sbjct: 503 QGIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDI 562 Query: 435 INYASHRFS 443 + Y + Sbjct: 563 VEYLVKQIK 571 >gi|48783|emb|CAA39134.1| ProRS [Escherichia coli] gi|147362|gb|AAA24420.1| prolyl-tRNA synthetase [Escherichia coli] Length = 572 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 124/235 (52%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+L++R GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLIVRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGGQASHEFQVLAQSGEDDVVFSDT-SDYAANIE 234 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 112/189 (59%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 383 EVADIRNVVAGDPSPDGQGRLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 443 CYGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 502 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++ Sbjct: 503 QGIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDI 562 Query: 435 INYASHRFS 443 + Y + Sbjct: 563 VEYLVKQIK 571 >gi|53726087|ref|YP_104063.1| prolyl-tRNA synthetase [Burkholderia mallei ATCC 23344] gi|238561266|ref|ZP_00442346.2| proline--tRNA ligase [Burkholderia mallei GB8 horse 4] gi|254202783|ref|ZP_04909146.1| prolyl-tRNA synthetase [Burkholderia mallei FMH] gi|254208125|ref|ZP_04914475.1| prolyl-tRNA synthetase [Burkholderia mallei JHU] gi|81823924|sp|Q62GV8|SYP_BURMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|52429510|gb|AAU50103.1| prolyl-tRNA synthetase [Burkholderia mallei ATCC 23344] gi|147747030|gb|EDK54107.1| prolyl-tRNA synthetase [Burkholderia mallei FMH] gi|147752019|gb|EDK59086.1| prolyl-tRNA synthetase [Burkholderia mallei JHU] gi|238524974|gb|EEP88404.1| proline--tRNA ligase [Burkholderia mallei GB8 horse 4] Length = 578 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 130/235 (55%), Positives = 168/235 (71%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKQNEFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD E K SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDHESLKESYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y+RIF R+G + P+ A++G IGG SHEF V+ADTGE + DF E Sbjct: 181 YVRIFTRIGFEFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPT-SDFAANVE 234 Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 70/179 (39%), Positives = 101/179 (56%), Gaps = 3/179 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPVVADIRNVKAGDPSPDGKGALDICRGIEVGHVFQLGTKYSDAMGATFIDESGKAQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE + D KGI+WP+++APF++ L + R+A +K+YA Sbjct: 442 VMGCYGIGITRILGAAIEQNFDDKGIVWPEAIAPFEVVLCPMGYDRSDAVREAADKLYAD 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R + Sbjct: 502 LAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGRRDAEATLLP 560 >gi|293556705|ref|ZP_06675269.1| threonyl-tRNA synthetase [Enterococcus faecium E1039] gi|291601167|gb|EFF31455.1| threonyl-tRNA synthetase [Enterococcus faecium E1039] Length = 646 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 78/448 (17%), Positives = 161/448 (35%), Gaps = 34/448 (7%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIRE 59 + K ++ + +E RD +L L M+ + G+ WLP G + I + Sbjct: 225 KALKEYIRLREEAKERDHRKLGKELDLF--MVSPEVGSGLPFWLPKGATIRRTIERYIVD 282 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIF 118 ++ G + P + +L+ SG +D Y ++M D D M + P + ++ Sbjct: 283 KEVSLGYQHVYTPIMGDVELYKTSGHWDHYQEDMFPPMDMGDGEMLVLRPMNCPHHMMVY 342 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 ++ I SYR LP ++ + R E ++ + + + P+ K + + Sbjct: 343 KNTIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTL 402 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NT 237 + ++ + R D T + D M + Sbjct: 403 ELMVAVYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKA 448 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D++ E A Y DV ++ +L + +S ++ F ++ Sbjct: 449 AMDELELDYFEAEGEAAFYGPKLDV---QVKTALGTEETLSTIQLD----FLLPERFD-- 499 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ G DG++ + + + G + + + + +P +AP + ++I + Sbjct: 500 --LTYVGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV- 555 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D +I RL G V DD E++G + + P Q++VG K + D+ V Sbjct: 556 -DAHGDYAYEIKERLQMKGLRVEVDDRNEKMGYKIRASQTQKIPYQLVVGDKELEDATVN 614 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ + L I+ N Sbjct: 615 VRRYGSKETAVEDLNIFIDAMEAEVKNY 642 >gi|238792729|ref|ZP_04636360.1| Prolyl-tRNA synthetase [Yersinia intermedia ATCC 29909] gi|238727837|gb|EEQ19360.1| Prolyl-tRNA synthetase [Yersinia intermedia ATCC 29909] Length = 572 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 122/235 (51%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EINSYKQLPLNFFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y ++F R+ L + A++G IGG SHEF VLA++GE + D+ E Sbjct: 181 YSKVFSRMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVF-STGSDYAANIE 234 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 75/192 (39%), Positives = 113/192 (58%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF GTKYS M AT +G DG++ + Sbjct: 380 PLPQIADLRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRNQVM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWPD++APF+++++ + H ++ E++YA Sbjct: 440 TMGCYGIGVSRVVAAAIEQNHDDRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYAT 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P +++G + + +VE K+R G ++ + Sbjct: 500 LRSHGIDVILDDRKERPGVMFADMELIGVPHNIVIGDRNLDSEEVEYKNRRVGEKQMIKT 559 Query: 432 EEVINYASHRFS 443 E+I++ + Sbjct: 560 SEIIDFLLGQIK 571 >gi|294619108|ref|ZP_06698603.1| threonyl-tRNA synthetase [Enterococcus faecium E1679] gi|291594769|gb|EFF26151.1| threonyl-tRNA synthetase [Enterococcus faecium E1679] Length = 646 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 78/448 (17%), Positives = 161/448 (35%), Gaps = 34/448 (7%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIRE 59 + K ++ + +E RD +L L M+ + G+ WLP G + I + Sbjct: 224 KALKEYIRLREEAKERDHRKLGKELDLF--MVSPEVGSGLPFWLPKGATIRRTIERYIVD 281 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIF 118 ++ G + P + +L+ SG +D Y ++M D D M + P + ++ Sbjct: 282 KEVSLGYQHVYTPIMGDVELYKTSGHWDHYQEDMFPPMDMGDGEMLVLRPMNCPHHMMVY 341 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 ++ I SYR LP ++ + R E ++ + + + P+ K + + Sbjct: 342 KNTIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTL 401 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NT 237 + ++ + R D T + D M + Sbjct: 402 ELMVAVYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKA 447 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D++ E A Y DV ++ +L + +S ++ F ++ Sbjct: 448 AMDELELDYFEAEGEAAFYGPKLDV---QVKTALGTEETLSTIQLD----FLLPERFD-- 498 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ G DG++ + + + G + + + + +P +AP + ++I + Sbjct: 499 --LTYVGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV- 554 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D +I RL G V DD E++G + + P Q++VG K + D+ V Sbjct: 555 -DAHGDYAYEIKERLQMKGLRVEVDDRNEKMGYKIRASQTQKIPYQLVVGDKELEDATVN 613 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ + L I+ N Sbjct: 614 VRRYGSKETAVEDLNIFIDAMEAEVKNY 641 >gi|187479380|ref|YP_787405.1| prolyl-tRNA synthetase [Bordetella avium 197N] gi|114152173|sp|Q2KVA0|SYP_BORA1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|115423967|emb|CAJ50520.1| prolyl-tRNA synthetase [Bordetella avium 197N] Length = 576 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 133/275 (48%), Positives = 174/275 (63%), Gaps = 5/275 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y + L+E P DAE+ASH+LM R GMI + + GIYS++PLG K + V IIREE Sbjct: 1 MRASNYHINTLKEAPADAEVASHQLMTRAGMIRKLAGGIYSYMPLGLKVIRKVEHIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N +GAIE+ +P +Q A+LW ESGR++ YG+E+LR+ DR+ + + PT EEV+TDI R+ Sbjct: 61 MNASGAIELLMPVVQPAELWQESGRWEQYGQELLRIKDRHQRDFVLQPTSEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP F+ IQ KFRDE RPRFGVMR REF MKDAYSFD G+ SY+ MF + Sbjct: 121 EIHSYRQLPVNFFHIQTKFRDERRPRFGVMRGREFTMKDAYSFDRDEAGAGRSYDIMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD-- 238 Y RIF RLGL + A++G IGG SHEF V+ADTGE + + D D+ E + Sbjct: 181 YHRIFRRLGLAFRAVAADTGSIGGSRSHEFQVIADTGEDLLVFNPD-SDYAANIELAEAV 239 Query: 239 --FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + +++ P AA + E L L Sbjct: 240 SLLTERARPAEALQEVATPGAAKCEAVAELLGLPL 274 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 66/187 (35%), Positives = 102/187 (54%), Gaps = 3/187 (1%) Query: 261 DVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P+ K RGIEVGH+F+ GTKYS + ATF GK +QMG YG Sbjct: 389 DLRNVVAGDPSPDGKGTLAIQRGIEVGHVFFLGTKYSEALKATFLDETGKPALMQMGCYG 448 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGC 377 IG R+V A IE + D +GIIWP ++APF++ + + + R+ E +Y L + G Sbjct: 449 IGVTRIVGAAIEQNFDNRGIIWPRAIAPFEVVICPVGWGKSETVRNKSEALYQALREQGI 508 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 DV DD + G FA +L+G PL+V +G + ++D +E++ R +S++ + Sbjct: 509 DVILDDRDARPGVMFAEWELIGVPLRVTIGDRGLNDGVIELQGRRDTETVKISVDSALKE 568 Query: 438 ASHRFSN 444 ++ Sbjct: 569 ILNKLET 575 >gi|124265710|ref|YP_001019714.1| prolyl-tRNA synthetase [Methylibium petroleiphilum PM1] gi|152112930|sp|A2SD40|SYP_METPP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|124258485|gb|ABM93479.1| prolyl-tRNA synthetase [Methylibium petroleiphilum PM1] Length = 581 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 121/239 (50%), Positives = 161/239 (67%), Gaps = 1/239 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + GIYS++P+G + + V AIIREE Sbjct: 1 MKASQFFVSTLKEAPADAEITSHKLMMRAGMIKRLGAGIYSYMPMGLRVIRKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW E+GR++ G E++R+ DR+D+ I PT EEV+TDI R Sbjct: 61 MNRAGAVELLMPVVQPAELWQETGRFEKMGPELMRVKDRHDRDFIIQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP FY IQ KFRDE RPRFGVMR REF MKDAYSFD + SY+ M+ + Sbjct: 121 ELRSYRQLPKNFYHIQTKFRDERRPRFGVMRGREFTMKDAYSFDRDEAAAGRSYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y RIF R GL + A++G IGGD SHEF V+A+TGE + D+ E + Sbjct: 181 YGRIFDRFGLSYRAVAADTGAIGGDRSHEFQVIAETGEDAIVYCPT-SDYAANIELAEC 238 Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 67/189 (35%), Positives = 108/189 (57%), Gaps = 3/189 (1%) Query: 259 TSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N + D P+ K V RGIEVGH+FY GTKYS M+AT+ GK ++MG Sbjct: 393 VADIRNAVVGDPSPDGKGVLAIQRGIEVGHVFYLGTKYSAAMNATYLDETGKPRLMEMGC 452 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R++ A IE HD +GI+WP ++APF++ + I R A + ++ L + Sbjct: 453 YGIGVTRILGAAIEQRHDARGIVWPTAIAPFEVVICPIGYDRSAEVRQAADTLHDELQAL 512 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G D+ DD GE+ G+ FA +L+G P +V++ + + + +VE++ R +++ EV+ Sbjct: 513 GMDLMLDDRGERPGAMFADWELIGIPQRVVISDRGLKEGQVELQGRQEAEAGKLAVAEVV 572 Query: 436 NYASHRFSN 444 R + Sbjct: 573 AQLRARLRD 581 >gi|283850295|ref|ZP_06367584.1| prolyl-tRNA synthetase [Desulfovibrio sp. FW1012B] gi|283574321|gb|EFC22292.1| prolyl-tRNA synthetase [Desulfovibrio sp. FW1012B] Length = 575 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 130/237 (54%), Positives = 170/237 (71%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y+ P L+E+P +AE+ SHKL+LR GMI + + GIY++LPLG +A++NV I+REE Sbjct: 1 MRLSRYYAPTLKESPAEAEVISHKLLLRAGMIRKLTAGIYTYLPLGLRAVNNVARIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q ADLW ESGR+D YG+E+LR DR+D+ GPTHEEV+TD+ R Sbjct: 61 MDRAGALEILMPAVQPADLWKESGRWDFYGRELLRFVDRHDRESCLGPTHEEVVTDLVRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR LP YQ+Q KFRDE+RPRFG+MR REF+MKDAYSFD G+ SY MF + Sbjct: 121 EIRSYRQLPVNLYQVQTKFRDEIRPRFGLMRGREFVMKDAYSFDKDDAGADASYKSMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF RLGLK + A+SG IGG SHEF+VLA+TGE + D+ E Sbjct: 181 YARIFTRLGLKFRAVSADSGAIGGSFSHEFMVLAETGEDTIVACPAC-DYGANLEKA 236 Score = 169 bits (429), Expect = 7e-40, Method: Composition-based stats. Identities = 71/186 (38%), Positives = 106/186 (56%), Gaps = 2/186 (1%) Query: 253 TAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A D+ D+ P+ +GIEVGH+F G KYS +SATF GK+ Sbjct: 374 DARVVDFVDLRQVAPGDTCPKCGAALDFTKGIEVGHVFKLGLKYSKALSATFLDEAGKEQ 433 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 ++ MG YGIG R+VAA IE ++D GI++P +APF+ +LIN+ D+ ++IYA Sbjct: 434 FMIMGCYGIGVSRIVAACIEQNNDASGIVFPPPIAPFEAALINLSPKDETASAKADEIYA 493 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L+K G + DD E+ G +F ADL+G P+Q+ +G K ++ VE K R TG + ++ Sbjct: 494 ALTKAGVETLLDDRDERPGVKFKDADLIGLPIQLTLGGKGLARGIVETKDRRTGEKGELP 553 Query: 431 LEEVIN 436 LE + Sbjct: 554 LEGFLE 559 >gi|242238324|ref|YP_002986505.1| prolyl-tRNA synthetase [Dickeya dadantii Ech703] gi|242130381|gb|ACS84683.1| prolyl-tRNA synthetase [Dickeya dadantii Ech703] Length = 572 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 124/235 (52%), Positives = 164/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYMLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFG+MR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EISSYKQLPLNFYQIQTKFRDEVRPRFGIMRAREFLMKDAYSFHTTQESLQITYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+ L ++A++G IGG+ SHEF VLA +GE + D+ E Sbjct: 181 YSKIFSRMDLDFRAVQADTGSIGGNASHEFQVLAASGEDDIVF-STGSDYAANIE 234 Score = 173 bits (439), Expect = 5e-41, Method: Composition-based stats. Identities = 69/186 (37%), Positives = 113/186 (60%), Gaps = 3/186 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + AT + DG++ + MG Y Sbjct: 385 ADIRNVVEGDQSPDGRGSLLIKRGIEVGHIFQLGTKYSEALKATVQVEDGRNQVLTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVG 376 GIG RV+AA IE +HD +GIIWPD++APF+++++ + H ++ E IY +L G Sbjct: 445 GIGVTRVIAAAIEQNHDERGIIWPDAIAPFQVAILPMNMHKSFRVQEVAESIYQQLRAKG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E KHR G +E + + +++N Sbjct: 505 IEVLLDDRKERPGVMFADMELIGVPHTIVIGDRNLDNDDIEYKHRRKGEKEMIKVGDIVN 564 Query: 437 YASHRF 442 + + + Sbjct: 565 FLTVQI 570 >gi|238751425|ref|ZP_04612917.1| Prolyl-tRNA synthetase [Yersinia rohdei ATCC 43380] gi|238710292|gb|EEQ02518.1| Prolyl-tRNA synthetase [Yersinia rohdei ATCC 43380] Length = 572 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 123/235 (52%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EINSYKQLPLNFFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+ L + A++G IGG SHEF VLA++GE + D+ E Sbjct: 181 YSKIFERMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVF-STDSDYAANIE 234 Score = 176 bits (445), Expect = 9e-42, Method: Composition-based stats. Identities = 74/192 (38%), Positives = 113/192 (58%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF GTKYS M AT +G DG++ + Sbjct: 380 PLPQIADIRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRNQVM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYAR 371 MG YGIG RVVAA IE ++D +GIIWPD++APF+++++ + H ++ E++YA Sbjct: 440 TMGCYGIGVSRVVAAAIEQNYDDRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYAT 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P +++G + + +VE K+R G ++ + Sbjct: 500 LRSHGIDVILDDRKERPGVMFADMELIGVPHNIVIGDRNLDSEEVEYKNRRAGEKQMIKT 559 Query: 432 EEVINYASHRFS 443 E+I++ + Sbjct: 560 SEIIDFLLGQIK 571 >gi|308185763|ref|YP_003929894.1| Prolyl-tRNA synthetase [Pantoea vagans C9-1] gi|308056273|gb|ADO08445.1| Prolyl-tRNA synthetase [Pantoea vagans C9-1] Length = 572 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 127/285 (44%), Positives = 178/285 (62%), Gaps = 20/285 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L +E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTQYLLSTQKETPSDAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q ADLW ESGR++ YG E+LR+ADR+++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAVEILMPVVQPADLWQESGRWEEYGPELLRIADRHERPFVLGPTHEEVVTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF ++ E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHVSQESLQETYDAMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y +IF R+GL ++A++G IGG SHEF VLA +GE V D+ E Sbjct: 181 YSQIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIF-STDSDYAANIELAEAV 239 Query: 236 --------------NTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 + D ++ +VEQ++ P T K Sbjct: 240 APAGERAAPSQEMQLVETPDAKTIAELVEQFSVPVEKTVKTLIVK 284 Score = 179 bits (455), Expect = 7e-43, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 115/193 (59%), Gaps = 3/193 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A+ +D+ N D P+ K RGIEVGHIF GTKYS + A+ +G DG++ + Sbjct: 380 PLASVADIRNVVEGDLSPDGKGTLQIKRGIEVGHIFQLGTKYSDALKASVQGEDGRNQVM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWPD++APF+++++ + ++ E++YA Sbjct: 440 SMGCYGIGITRVVAAAIEQNHDDRGIIWPDALAPFEVAILPMNMQKSFRVKELAEELYAT 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G +V DD E+ G FA +L+G P +++G + + + ++E K R G ++ + Sbjct: 500 LRAKGVEVILDDRKERPGVMFADMELIGVPHTIVIGDRNLDNQEIEYKSRRAGEKQMIKQ 559 Query: 432 EEVINYASHRFSN 444 +E++++ + Sbjct: 560 DEIVDFLLKALNK 572 >gi|24374667|ref|NP_718710.1| prolyl-tRNA synthetase [Shewanella oneidensis MR-1] gi|81845788|sp|Q8ECI8|SYP_SHEON RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|24349306|gb|AAN56154.1|AE015752_11 prolyl-tRNA synthetase [Shewanella oneidensis MR-1] Length = 570 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 122/237 (51%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YS+LP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSYLPSGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLWVE+GR+D +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPMVQPADLWVETGRWDKFGPELLRFKDRHNRDFVLGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREFLMKDAYSF L + +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHLDMDTLNETYEAMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y I R+GL P+ A++G IGG +SHEF VLA +GE + D+ E Sbjct: 181 YSNILSRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAY-STGSDYAANIEKA 236 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 70/204 (34%), Positives = 110/204 (53%), Gaps = 3/204 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPM 298 D I + P A +D+ N + P+ ARGIEVGHIF GT YS M Sbjct: 365 DDKHYFGINWERDLPLAQAADIRNVVEGEPTPDGLGTYAMARGIEVGHIFQLGTNYSKSM 424 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 +AT +GK + MG YG+G R+VAA IE + D +GI+WP+++APF + ++ + Sbjct: 425 NATVLDENGKSQVLLMGCYGVGVSRIVAAAIEQNFDDRGIVWPEAIAPFSVGILPMNMHK 484 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D E++Y LS G DV DD E+ G FA +L+G P V++G + + E Sbjct: 485 SHRVTDIAEQLYKDLSAAGIDVLLDDRKERPGVMFADMELIGIPHTVVIGDRNIDAGVFE 544 Query: 418 IKHRLTGIREDMSLEEVINYASHR 441 K+R TG ++D+ ++++++ + Sbjct: 545 YKNRRTGEKQDVPFDQIVDFLKNL 568 >gi|16124719|ref|NP_419283.1| threonyl-tRNA synthetase [Caulobacter crescentus CB15] gi|221233433|ref|YP_002515869.1| threonyl-tRNA synthetase [Caulobacter crescentus NA1000] gi|22654137|sp|Q9AAX8|SYT_CAUCR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783515|sp|B8GZS7|SYT_CAUCN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|13421637|gb|AAK22451.1| threonyl-tRNA synthetase [Caulobacter crescentus CB15] gi|220962605|gb|ACL93961.1| threonyl-tRNA synthetase [Caulobacter crescentus NA1000] Length = 655 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 72/434 (16%), Positives = 139/434 (32%), Gaps = 39/434 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 I + RD + L I + KG+ W P G + +R + G E Sbjct: 240 RIEEAEKRDHRKLGKTMDLF--HIQEEGKGMVFWHPKGWALYRVLEDYMRRRLDAAGYKE 297 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 + P + LW +SG + +G M + + P + IF KSYR L Sbjct: 298 VKTPQILDRSLWEKSGHAEKFGHAMFMCESAEGEVLAVKPMNCPGHIQIFNVGQKSYREL 357 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P + R E G+MR R F DA+ F + ++ S + +++ Sbjct: 358 PLRMAEFGACHRYEPSGAMHGIMRVRAFTQDDAHIFCREEQVTEES-ARFIELLRSVYND 416 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 LG+ + + P + E D + + + Sbjct: 417 LGMTLADTKFSTRPELRAGTDE-----------------TWDKAEAALAAAAEAAGETLT 459 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 + A Y + L D++ + ++ F + + A + DG Sbjct: 460 LQPGEGAFYGPKLEF---SLKDAIGRVWQCGTLQLD----FVLPER----LDAEYVSEDG 508 Query: 308 KDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + +G+ ++ + G +W ++ D Sbjct: 509 SKKRPVMLHRAILGSFERFIGILLENFAGALPVWLAPTQVVVATIT------SDADDYAR 562 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 ++ +L+K+G D E+I + L P+ +VG K ++ ++ + Sbjct: 563 EVVEKLTKLGMRAELDLRNEKINYKIREHSLAKVPVIAVVGRKEAETGQLALRRLGGEGQ 622 Query: 427 EDMSLEEVINYASH 440 +SLEE + Sbjct: 623 SVLSLEEALRVLKS 636 >gi|238796636|ref|ZP_04640143.1| Prolyl-tRNA synthetase [Yersinia mollaretii ATCC 43969] gi|238719614|gb|EEQ11423.1| Prolyl-tRNA synthetase [Yersinia mollaretii ATCC 43969] Length = 572 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 123/235 (52%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EINSYKQLPLNFFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+ L + A++G IGG SHEF VLA++GE + D+ E Sbjct: 181 YSKIFERMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVF-STGSDYAANIE 234 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 115/206 (55%), Gaps = 3/206 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D I + P +D+ N D P+ + RGIEVGHIF GTKYS M Sbjct: 366 DDKHYFGINWERDLPLPQVADLRNVVEGDISPDGQGTLQIKRGIEVGHIFQLGTKYSEAM 425 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 AT +G DG++ + MG YGIG RVVAA IE ++D +GIIWPD++APF+++++ + H Sbjct: 426 KATVQGEDGRNQVMTMGCYGIGVSRVVAAAIEQNYDDRGIIWPDAIAPFQVAILPMNMHK 485 Query: 359 Q-VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 ++ E++YA L G DV DD E+ G FA +L+G P +++G + + +VE Sbjct: 486 SFRVKELAEELYATLRSHGIDVILDDRKERPGVMFADMELIGVPHNIVIGDRNLDSEEVE 545 Query: 418 IKHRLTGIREDMSLEEVINYASHRFS 443 KHR G ++ + E+I + + Sbjct: 546 YKHRRAGEKQMIKTSEIIEFLLSQIK 571 >gi|299768873|ref|YP_003730899.1| prolyl-tRNA synthetase [Acinetobacter sp. DR1] gi|298698961|gb|ADI89526.1| prolyl-tRNA synthetase [Acinetobacter sp. DR1] Length = 571 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 126/253 (49%), Positives = 173/253 (68%), Gaps = 1/253 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+Y+WLP+G + L V+AI+REE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGTRVLKKVDAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GA+E+ +P Q A LW ESGRY+ YG E+LR DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLRFKDRHTNPFVLGPTHEEVITDMARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ + Sbjct: 121 ELKSYKQLPVNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHATQESLQETYDVMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P++A++G IGG SHEF VLA +GE + D+ E + Sbjct: 181 YSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLAASGEDDIAF-STESDYAANVEMAEAV 239 Query: 241 DIISLNSIVEQWT 253 + + + +++ Sbjct: 240 LVGARAAPTQEFK 252 Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 72/192 (37%), Positives = 104/192 (54%), Gaps = 3/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A D+ N D P+ K RGIEVGHIF GTKYS + G DGK Sbjct: 379 ERDAQITEVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGTKYSEALGCKVLGEDGK 438 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEK 367 V MG YGIG RVVAA IE ++D KGI+WP ++APF+I+++ + A +A E Sbjct: 439 PFTVTMGCYGIGVTRVVAAAIEQNYDDKGIMWPQAIAPFEIAIVPMNAHKSPRTLEAAEA 498 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +YA L G DV DD E+ G +F+ +L+G P ++++G K + E K R Sbjct: 499 LYAELQAQGFDVLLDDRNERPGVKFSDLELMGIPHRIVIGEKGLDAGTFEYKGRRDAEAS 558 Query: 428 DMSLEEVINYAS 439 +++ EE++ + Sbjct: 559 NLTKEELLAKLA 570 >gi|170727590|ref|YP_001761616.1| prolyl-tRNA synthetase [Shewanella woodyi ATCC 51908] gi|226701338|sp|B1KNR3|SYP_SHEWM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|169812937|gb|ACA87521.1| prolyl-tRNA synthetase [Shewanella woodyi ATCC 51908] Length = 569 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 123/237 (51%), Positives = 163/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P DAE+ SH+LMLR GMI +++ G+YSWLP G + L + AI+REE Sbjct: 1 MRVSKYLLSTQKETPADAEVISHQLMLRAGMIRRNASGLYSWLPTGLRVLRKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ G++E+ +P +Q ADLWVE+GR++ +G E+LR DR+++ + GPTHEEV+TDI R Sbjct: 61 MNKAGSVEILMPMVQPADLWVETGRFEKFGPELLRFQDRHNRDFVLGPTHEEVITDIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ KFRDE+RPRFGVMRSREFLMKDAYSF L E +Y MF + Sbjct: 121 EVNSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHLDQETMDETYESMFQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y I RLGL P+ A++G IGG +SHEF VLA++GE + D+ E Sbjct: 181 YSNILTRLGLAFRPVIADTGSIGGSMSHEFHVLANSGEDLIAY-STGSDYAANIEKA 236 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 70/203 (34%), Positives = 111/203 (54%), Gaps = 3/203 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPM 298 D L I + P A D+ N ++ P + A RGIEVGHIF G YS M Sbjct: 365 DNKHLFGINWERNLPQAEAFDLRNIIEGEASPCGQGTIALLRGIEVGHIFQLGKNYSEAM 424 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 +A +GK + MG YG+G R+VAA IE +HD +GIIWPD++APF++ ++ + Sbjct: 425 NANVLDQNGKAQTLLMGCYGVGVSRMVAAAIEQNHDDRGIIWPDAIAPFRVGILPMNMHK 484 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 +D E++Y LS G +V +DD E+ G FA +L+G P V++G + + E Sbjct: 485 SHRVQDMAEQLYKDLSDAGIEVLFDDRKERAGVMFADMELIGLPHVVVIGDRNIDAGVFE 544 Query: 418 IKHRLTGIREDMSLEEVINYASH 440 K+R TG ++++ ++++ + Sbjct: 545 YKNRRTGEKQEVPFDQIVEFLKS 567 >gi|300702990|ref|YP_003744592.1| proline--tRNA ligase [Ralstonia solanacearum CFBP2957] gi|299070653|emb|CBJ41948.1| Proline--tRNA ligase [Ralstonia solanacearum CFBP2957] Length = 574 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 120/235 (51%), Positives = 163/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G +A+ V I+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGIYTYMPVGLRAIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+EM +P +Q +LW E+GR+D G+E++R+ DR+++ ++ PT EEV+TDI R+ Sbjct: 61 MNAAGAVEMLMPVVQPGELWQETGRWDKMGEELMRVKDRHERDLVIQPTSEEVVTDIART 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ +P FYQIQ KFRDE RPRFG+MR REF MKDAYSFD EG K SY KMF + Sbjct: 121 EIRSYKQMPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDVEGMKVSYQKMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R GL + A++G IGG SHEF V+A+TGE + D+ E Sbjct: 181 YTRIFQRFGLAFRAVAADNGAIGGSGSHEFHVIAETGEDAIVY-SPESDYAANIE 234 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 109/192 (56%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N D P+ K RGIEVGH+F GT+YS MSATF +GK + Sbjct: 382 PEAEVADLRNVVEGDPSPDGKGTLAICRGIEVGHVFMLGTRYSESMSATFLDENGKTQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE ++D +GIIWP S+APF++ + + + R ++++A Sbjct: 442 VMGCYGIGITRILGAAIEQNYDARGIIWPVSIAPFEVVICPVGYDRSEAVRAEADRLHAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G DV DD GE+ G FA +L+G P +V+VG + + + K+E++ R ++ Sbjct: 502 LAAAGIDVILDDRGERPGVMFADWELIGVPFRVVVGERGLKEGKLELQGRRDEAATAVAP 561 Query: 432 EEVINYASHRFS 443 +V+ R + Sbjct: 562 ADVLATLKSRLA 573 >gi|330685703|gb|EGG97342.1| threonine--tRNA ligase [Staphylococcus epidermidis VCU121] Length = 523 Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 153/445 (34%), Gaps = 33/445 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD L L G+ WLP G + I +++ Sbjct: 107 KAHLEMLEERKERDHRKIGKDLELFAN-SQLVGAGLPLWLPNGATIRREIERYIVDKEVS 165 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHI 122 G + P L + DL+ SG +D Y ++M ++ M+ P + ++ + Sbjct: 166 MGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMKLDETEEMVLRPMNCPHHMMVYNNKP 225 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ R E ++ + + + P+ K + ++ Sbjct: 226 HSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQ 285 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDD 241 ++ G + R D + + + D + D+ Sbjct: 286 DVYKDFGFEDYRFRLS--------------YRDPEDKEKYFDDDEMWNKAENMIKEAADE 331 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y DV ++ ++ + + +S ++ F ++ T Sbjct: 332 LGLSYEEAIGEAAFYGPKLDV---QVKTAMGKEETLSTAQLD----FLLPERF----ELT 380 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + G DG+ H + G+ + + + +I +N+ H Sbjct: 381 YIGQDGEHHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPKQVEIIPVNLDLH---- 436 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D + I L G V DD E++G + A + P Q++VG K V +++V ++ Sbjct: 437 YDYAKSIQDELKSQGVRVEIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNEVNVRKY 496 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + +E + +E I + Sbjct: 497 GSQDQETLEKDEFIWNLVDEIRLKK 521 >gi|193215696|ref|YP_001996895.1| threonyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110] gi|238692696|sp|B3QUU7|SYT_CHLT3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|193089173|gb|ACF14448.1| threonyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110] Length = 659 Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats. Identities = 81/453 (17%), Positives = 158/453 (34%), Gaps = 43/453 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQ 61 K+F I + RD +L L MI + G+ WLP G + + + +++EQ Sbjct: 239 LKKHFSQIEEAKKRDHRKLGSELELF--MISPEVGSGLPMWLPKGAILRNELESFLKDEQ 296 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEML---RLADRNDKA--MIYGPTHEEVMTD 116 R G + + P + + +L+ SG Y Y D K + P + Sbjct: 297 RRRGYLPVVTPHIGNIELYKTSGHYPYYSDSQFPPLTFTDELGKEEQYLLKPMNCPHHHQ 356 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 I+ S +SYR+LP + +R E G++R R F D++ + + Sbjct: 357 IYSSKPRSYRDLPIRLTEFGTVYRYEQSGELNGLIRVRGFTQDDSHIYCRQDQLVDEICK 416 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPS 234 +F LG + R D T + + + Sbjct: 417 -AIDLTQFVFKTLGFAEVQTRLSLR--------------DPENTSKYSGNNEVWVQAEQD 461 Query: 235 ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY 294 D + I + Y D + D++ ++ ++ Sbjct: 462 LKDAADKMQLNYFIGLGEASFYGPKIDFI---VRDAIGRKWQLGTVQVDYVMP------- 511 Query: 295 SLPMSATFKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 T+ G+DG+ H + G++ ++ + +P ++P ++ ++ Sbjct: 512 -ERFDLTYVGSDGQKHRPVVIHRAPFGSLERFIGILI---ENFAGNFPVWLSPVQVMVLP 567 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 I RD + +L G D+ GE++G + A++ P +VG K ++ Sbjct: 568 IT---DDFRDYAHSVLQKLLDAGIRAEIDERGEKVGKKIRDAEIKKIPYMFVVGEKEMAA 624 Query: 414 SKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 + V ++ G + M L+E I S + Sbjct: 625 ASVAVRRHKEGDKGTMPLQEAIRLLQTDISTKK 657 >gi|50122450|ref|YP_051617.1| prolyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043] gi|81827028|sp|Q6D1B9|SYP_ERWCT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|49612976|emb|CAG76427.1| prolyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043] Length = 572 Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats. Identities = 124/235 (52%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYMLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLWVESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWVESGRWDQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 EVSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQATYDTMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+ L ++A++G IGG+ SHEF VLA +GE + D+ E Sbjct: 181 YSKIFSRMDLDFRAVQADTGSIGGNASHEFQVLASSGEDDIVF-STESDYAANIE 234 Score = 173 bits (438), Expect = 6e-41, Method: Composition-based stats. Identities = 69/187 (36%), Positives = 109/187 (58%), Gaps = 3/187 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGHIF G+KYS + AT +G DG++ + MG Sbjct: 384 VADIRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGSKYSEALKATVQGEDGRNQTLTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKV 375 YGIG RVVAA IE ++D +GIIWPD++APF ++++ + H ++ E IY +L Sbjct: 444 YGIGVTRVVAAAIEQNNDERGIIWPDAIAPFHVAILPMNMHKSFRVKEVAEDIYQQLRAK 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + ++E K+R G ++ + E+I Sbjct: 504 GIEVLLDDRKERPGVMFADMELIGVPHTIVIGDRNLDSEEIEYKNRRVGEKQMIKTSEII 563 Query: 436 NYASHRF 442 ++ Sbjct: 564 DFLLANI 570 >gi|69245748|ref|ZP_00603614.1| Threonyl-tRNA synthetase, class IIa [Enterococcus faecium DO] gi|257880251|ref|ZP_05659904.1| threonyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257883051|ref|ZP_05662704.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257891365|ref|ZP_05671018.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|257893638|ref|ZP_05673291.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|258614441|ref|ZP_05712211.1| threonyl-tRNA synthetase [Enterococcus faecium DO] gi|260560451|ref|ZP_05832625.1| threonyl-tRNA synthetase [Enterococcus faecium C68] gi|293563269|ref|ZP_06677719.1| threonyl-tRNA synthetase [Enterococcus faecium E1162] gi|294621403|ref|ZP_06700575.1| threonyl-tRNA synthetase [Enterococcus faecium U0317] gi|314939207|ref|ZP_07846461.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133a04] gi|314942550|ref|ZP_07849386.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133C] gi|314948402|ref|ZP_07851791.1| threonyl-tRNA synthetase [Enterococcus faecium TX0082] gi|314951256|ref|ZP_07854311.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133A] gi|314991679|ref|ZP_07857149.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133B] gi|314996805|ref|ZP_07861818.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133a01] gi|68195641|gb|EAN10081.1| Threonyl-tRNA synthetase, class IIa [Enterococcus faecium DO] gi|257814479|gb|EEV43237.1| threonyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257818709|gb|EEV46037.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257827725|gb|EEV54351.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|257830017|gb|EEV56624.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|260073453|gb|EEW61781.1| threonyl-tRNA synthetase [Enterococcus faecium C68] gi|291599050|gb|EFF30095.1| threonyl-tRNA synthetase [Enterococcus faecium U0317] gi|291604721|gb|EFF34205.1| threonyl-tRNA synthetase [Enterococcus faecium E1162] gi|313589100|gb|EFR67945.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133a01] gi|313593770|gb|EFR72615.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133B] gi|313596608|gb|EFR75453.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133A] gi|313598686|gb|EFR77531.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133C] gi|313641458|gb|EFS06038.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133a04] gi|313645194|gb|EFS09774.1| threonyl-tRNA synthetase [Enterococcus faecium TX0082] Length = 646 Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats. Identities = 78/448 (17%), Positives = 161/448 (35%), Gaps = 34/448 (7%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIRE 59 + K ++ + +E RD +L L M+ + G+ WLP G + I + Sbjct: 225 KALKEYIRLREEAKERDHRKLGKELDLF--MVSPEVGSGLPFWLPKGATIRRTIERYIVD 282 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIF 118 ++ G + P + +L+ SG +D Y ++M D D M + P + ++ Sbjct: 283 KEVSLGYQHVYTPIMGDVELYKTSGHWDHYQEDMFPPMDMGDGEMLVLRPMNCPHHMMVY 342 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 ++ I SYR LP ++ + R E ++ + + + P+ K + + Sbjct: 343 KNTIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTL 402 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NT 237 + ++ + R D T + D M + Sbjct: 403 ELMVAVYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKA 448 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D++ E A Y DV ++ +L + +S ++ F ++ Sbjct: 449 AMDELELDYFEAEGEAAFYGPKLDV---QVKTALGTEETLSTIQLD----FLLPERFD-- 499 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ G DG++ + + + G + + + + +P +AP + ++I + Sbjct: 500 --LTYVGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV- 555 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D +I RL G V DD E++G + + P Q++VG K + D+ V Sbjct: 556 -DAHGDYAYEIKERLQMKGLRVEVDDRNEKMGYKIRASQTQKIPYQLVVGDKELEDATVN 614 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ + L I+ N Sbjct: 615 VRRYGSKETAVEDLNIFIDAMEAEVKNY 642 >gi|293390782|ref|ZP_06635116.1| prolyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951316|gb|EFE01435.1| prolyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 571 Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats. Identities = 143/415 (34%), Positives = 195/415 (46%), Gaps = 42/415 (10%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P +A + SH+LMLR GMI + G+Y+WLP G + L V IIR+E Sbjct: 1 MRTSKYLLSTLKETPAEAAVVSHQLMLRAGMIRPLASGLYNWLPTGLRVLKKVENIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GAIE+ +P +Q A+LW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKSGAIEVEMPVVQPAELWQESGRWEQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP YQIQ KFRDE+RPRFGVMR REFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 EVSSYRQLPLNLYQIQTKFRDEVRPRFGVMRGREFLMKDAYSFHTSKESLQETYDVMYQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP------- 233 Y IF RLGL ++A++G IGG SHEF VLA++GE V D+ Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLANSGEDDVIF-STESDYAANIELAEAV 239 Query: 234 -----------SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 E D ++ +VEQ+ P T K N+ + Sbjct: 240 AVGERAQPTKTMELVDTPKAKTIAELVEQFNLPIEKTVKTLIAK-----GANEEQPLVAL 294 Query: 283 EVGHIFYFGTKYSLP-----MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + + F + G +G + + VI Sbjct: 295 ILRGDHELNEVKAEKLAEVASPLEFADEAAIKAKIGAGVGALGPVNLNIPVIIDRSVALM 354 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYA-------------RLSKVGCDV 379 + NI V I L K G +V Sbjct: 355 SDFGAGANIDGKHYFNINWERDVALPKVADIRNVVEGDPSPDGKGTLLIKRGIEV 409 Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 113/207 (54%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D +I + +D+ N D P+ K + RGIEVGHIF G KYS M Sbjct: 364 DGKHYFNINWERDVALPKVADIRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGDKYSQAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 +AT +G DG+ V MG YGIG RVVAA IE HD + I D++APF ++++ + Sbjct: 424 NATVQGEDGRPMVVTMGCYGIGVTRVVAAAIEQHHDERGIIWPSDAIAPFTVAIVPMNMY 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + E +Y L G +V +DD E+ G FA +L+G P V++G K +++ ++ Sbjct: 484 KSESVQQFAEDLYRTLQAQGVEVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K+R TG ++ ++ +++++ + + Sbjct: 544 EYKNRRTGEKQMIAKAQLLDFLKSQIN 570 >gi|311259273|ref|XP_003128020.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like [Sus scrofa] Length = 472 Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats. Identities = 149/457 (32%), Positives = 231/457 (50%), Gaps = 46/457 (10%) Query: 3 RSKYFLPI-LQEN--------PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNV 53 S+ F P L+E+ P D S +LML+ G+IH S G Y LP +A++ + Sbjct: 39 LSRVFQPQNLREDQVLSLEGRPGDLTCKSQRLMLQVGLIHPASPGCYHLLPYTVRAMEKL 98 Query: 54 NAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEV 113 ++ +E G ++++P+L A+LW + R+DS GKE+LRL DR+ K GPTHEE Sbjct: 99 VRVVDQEMQAIGGQKVNMPSLSPAELWRATSRWDSMGKELLRLRDRHGKEYCLGPTHEEA 158 Query: 114 MT-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKH 172 +T + SY+ LP YQ+ KFRDE RPRFG++R REF MKD Y+FD +PE ++ Sbjct: 159 ITALVASQKTLSYKQLPVLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSPEAARR 218 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 +Y+ + +Y +F RLGL+ + ++A+ G IGG +SHEF + D GE ++ Sbjct: 219 TYSLVCDAYGSLFDRLGLQCLQVQADVGSIGGTMSHEFQLPVDVGEDRLALCPRC----- 273 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + A + + + +GIEVGH FY GT Sbjct: 274 ---------------------SFSANVETLDLAQTNCPACQGPLTETKGIEVGHTFYLGT 312 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 KYS +A F GK +MG YG+G R++AA IE I WP +AP+++ LI Sbjct: 313 KYSSIFNAQFTNVHGKASLAEMGCYGLGVTRILAAAIEVLSAEDCIRWPGLLAPYQVCLI 372 Query: 353 NIKA--HDQVCRDACEKIYARLSKV-----GCDVFWDDMGE-QIGSQFAVADLLGFPLQV 404 K ++ + +Y +++ G +V DD IG++ AD LG+P + Sbjct: 373 PPKKGSKEEAAAELTGHLYDHITEAVPQLRG-EVLLDDRTHLTIGNRLKDADKLGYPFVI 431 Query: 405 IVGSKFVSDSK-VEIKHRLTGIREDMSLEEVINYASH 440 I G + + + E++ + TG ++ E V+ S Sbjct: 432 IAGKRALDEPAHFEVRCQNTGEVVFLTREGVLELLSQ 468 >gi|239826651|ref|YP_002949275.1| prolyl-tRNA synthetase [Geobacillus sp. WCH70] gi|259511599|sp|C5D9C3|SYP_GEOSW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|239806944|gb|ACS24009.1| prolyl-tRNA synthetase [Geobacillus sp. WCH70] Length = 567 Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats. Identities = 122/235 (51%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ F+P L+E P DAE+ SH+L+LR G I Q + G+Y++LPLGQ+ L V AIIREE Sbjct: 1 MRQSQSFIPTLREVPADAEVKSHQLLLRAGFIRQSASGVYTFLPLGQRVLQKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P LQ A+LW +SGR+ SYG E++RL DR+++ GPTHEE++T + R Sbjct: 61 MNRAGAIELLMPALQPAELWQQSGRWYSYGPELMRLKDRHERDFALGPTHEEIITALVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +K+Y+ LP T YQIQ+KFRDE RPRFG++R REF+MKDAYSF + E +YNKM+ + Sbjct: 121 EVKTYKRLPLTLYQIQVKFRDEKRPRFGLLRGREFIMKDAYSFHTSQESLDETYNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL + A+SG IGG +HEF+VL++ GE + S D+ E Sbjct: 181 YSNIFRRCGLNFRAVIADSGAIGGKDTHEFMVLSEIGEDTIAYSD-ASDYAANIE 234 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 71/190 (37%), Positives = 113/190 (59%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ K RGIEVGH+F GT+YS M+AT+ +G+ + Sbjct: 378 ISEYADLRFIQEGDPSPDGKGTIRFARGIEVGHVFKLGTRYSKAMNATYLDENGRSQTMI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R+VAA+ E D G++WP SVAPF + LI++ A ++ R ++ Y +L Sbjct: 438 MGCYGIGVSRLVAAIAEQFADENGLVWPASVAPFHVHLISVNAKNEEQRQLADEWYEKLG 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V +DD E+ G +FA +DL+G P++V VG + ++ VEIK R TG ++S++E Sbjct: 498 QAGFEVLYDDRPERAGVKFADSDLIGIPIRVTVGKR-ANEGIVEIKVRQTGESMEVSVDE 556 Query: 434 VINYASHRFS 443 +I+ Sbjct: 557 LIDTIRRLLQ 566 >gi|167825898|ref|ZP_02457369.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 9] gi|226196858|ref|ZP_03792437.1| proline--tRNA ligase [Burkholderia pseudomallei Pakistan 9] gi|254299336|ref|ZP_04966786.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 406e] gi|157809003|gb|EDO86173.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 406e] gi|225931118|gb|EEH27126.1| proline--tRNA ligase [Burkholderia pseudomallei Pakistan 9] Length = 578 Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats. Identities = 131/235 (55%), Positives = 169/235 (71%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKQNEFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD E K SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDHESLKESYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y+RIF R+GL+ P+ A++G IGG SHEF V+ADTGE + DF E Sbjct: 181 YVRIFTRIGLEFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPT-SDFAANVE 234 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 70/179 (39%), Positives = 101/179 (56%), Gaps = 3/179 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPVVADIRNVKAGDPSPDGKGALDICRGIEVGHVFQLGTKYSDAMGATFIDESGKAQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE + D KGI+WP+++APF++ L + R+A +K+YA Sbjct: 442 VMGCYGIGITRILGAAIEQNFDDKGIVWPEAIAPFEVVLCPMGYDRSDAVREAADKLYAD 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R + Sbjct: 502 LAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGRRDAEATLLP 560 >gi|319407312|emb|CBI80953.1| Threonyl-tRNA synthetase [Bartonella sp. 1-1C] Length = 654 Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats. Identities = 81/445 (18%), Positives = 150/445 (33%), Gaps = 39/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD ++ L + S G+ W P G K N+ + +R + Sbjct: 233 KAYLHMLEEAEKRDHRRLGREMDLF--HFQEESPGMIFWHPKGWKMFQNLISYMRRRLDN 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD-----RNDKAMIYGPTHEEVMTDIF 118 E+ P + LW SG + Y + M + ++ P + IF Sbjct: 291 HKYAEVQAPQVLDKSLWEISGHWGWYKENMFKTIPAADDWNDECTYALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + L R E G+MR R F DA+ F + + + Sbjct: 351 KHGLKSYRDLPVRLAEFGLVHRYEPSGSLHGLMRVRSFTQDDAHIFCTEEQLADECLSIN 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L + G K I ++ + P S E A+ T V E + Sbjct: 411 -DLILSTYADFGFKEISLKLSTRPEKRVGSDELWDHAENIMTSVL--------KTIEEKS 461 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 IS+ + A Y + L D++ + ++ FG Sbjct: 462 SGCVKISI---LPGEGAFYGPKFEYI---LTDAIGREWQCGTTQVDFNLPERFG------ 509 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + D + + G+M ++ + G W ++ Sbjct: 510 --AFYIDKDSEKRQPVMIHRAIFGSMERFLGILIENFAGHIPFWLAPQQIVVATIT---- 563 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + +KI +L +G D E+I + L P+ ++ G + + V Sbjct: 564 --SDANEYAKKITEKLKALGLSAKLDSRNEKINYKIREHSLQKIPVILVCGKQEAQTNSV 621 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + + + +E+V Sbjct: 622 NVRRLGSVEQTFLPIEKVFAQLLDE 646 >gi|325123334|gb|ADY82857.1| prolyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2] Length = 571 Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats. Identities = 126/253 (49%), Positives = 172/253 (67%), Gaps = 1/253 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+Y+WLP+G + L V+AI+REE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGTRVLKKVDAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GA+E+ +P Q A LW ESGRY+ YG E+LR DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLRFKDRHTNPFVLGPTHEEVITDMARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ + Sbjct: 121 ELKSYKQLPVNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHATQESLQETYDVMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P++A++G IGG SHEF VLA +GE + D+ E + Sbjct: 181 YSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLAASGEDDIAF-STESDYAANVEMAEAV 239 Query: 241 DIISLNSIVEQWT 253 + + +++ Sbjct: 240 LVGERAAPTQEFK 252 Score = 167 bits (422), Expect = 5e-39, Method: Composition-based stats. Identities = 73/192 (38%), Positives = 105/192 (54%), Gaps = 3/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A + D+ N D P+ K RGIEVGHIF GTKYS + G DGK Sbjct: 379 ERDAQISEVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGTKYSEALGCKVLGEDGK 438 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEK 367 V MG YGIG RVVAA IE ++D KGIIWP ++APF+I+++ + A +A E Sbjct: 439 PFTVTMGCYGIGVTRVVAAAIEQNYDDKGIIWPQAIAPFEIAIVPMNAHKSPRTLEAAES 498 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +YA L G DV DD E+ G +F+ +L+G P ++++G K + E K R Sbjct: 499 LYAELQAQGFDVLLDDRNERPGVKFSDLELMGIPHRIVIGEKGLDAGTFEYKGRRDAEAS 558 Query: 428 DMSLEEVINYAS 439 +++ EE++ + Sbjct: 559 NLTKEELLAKLA 570 >gi|303248736|ref|ZP_07334989.1| threonyl-tRNA synthetase [Desulfovibrio fructosovorans JJ] gi|302489901|gb|EFL49829.1| threonyl-tRNA synthetase [Desulfovibrio fructosovorans JJ] Length = 647 Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats. Identities = 82/436 (18%), Positives = 150/436 (34%), Gaps = 42/436 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 KY + + RD +L L + + G+ W P G+ + R E Sbjct: 228 LKKYLRHLEEAKKRDHRKLGTQLDLFS-FSEEVGAGMPIWHPKGELIRTILEDFERREHL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 R G + P + +LW SG YD+Y + M + + +A P + I++S + Sbjct: 287 RRGYQLVRGPLILRRELWERSGHYDNYRENM-YFTEIDGQAYGIKPMNCLSHMLIYKSRV 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP ++++ + R E G+MR R+F DA+ + + Sbjct: 346 RSYRDLPQRYFELGVVHRHEKSGVLHGLMRVRQFTQDDAHILCRPDQLLDE-ITGVIKFV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + G + P S E D + + Sbjct: 405 QDVVALFGFDYEVD-LSTRPEKSIGSDE-----------------DWDRATKALIDAMES 446 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + I E A Y D+ KL D+L + + + F ++ Sbjct: 447 LGLPYDINEGDGAFYGPKIDI---KLKDALERRWQCATVQCD----FTLPERFD----LV 495 Query: 302 FKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + ADG+ M I R + +IE + A I Sbjct: 496 YTDADGERKRPVMLHRVILGAVERFLGVLIEHTAGALPTWLSPEQARILIVT-------D 548 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ++ E+ A+L++ G V D+ E++G + A + P ++ G K + ++ Sbjct: 549 AQKEFAEEAKAKLAEAGIRVELDERNEKLGFKVREAQMEKVPYMLVAGDKEKELGGLNVR 608 Query: 420 HRLTGIREDMSLEEVI 435 R SL+E++ Sbjct: 609 LRSGENLGVKSLDEIV 624 >gi|163756231|ref|ZP_02163346.1| uracil phosphoribosyltransferase [Kordia algicida OT-1] gi|161323843|gb|EDP95177.1| uracil phosphoribosyltransferase [Kordia algicida OT-1] Length = 647 Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 162/445 (36%), Gaps = 39/445 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L T + +G+ WLP G + +++ Q + G Sbjct: 230 YLHLLEEAKKRDHRKLGKELELFT-FSQKVGQGLPLWLPKGAALRSQLENFLKKAQQKAG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHIK 123 + P + +L+V SG Y YG++ + + D+ + P + +I+ + Sbjct: 289 YEMVISPHIGQKELYVTSGHYAKYGEDSFQAINTPKEDEEFLLKPMNCPHHCEIYNTKPF 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP + + +R E G+ R R F DA+ F TP+ + + + Sbjct: 349 SYKDLPKRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFC-TPDQLDQEFKNVIDLVM 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +F LG + + D + + + + + Sbjct: 408 YVFESLGFDNFTAQVSLR--------------DPEKPEKYIGSTENWEKAENAIINAAKE 453 Query: 243 ISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 LN ++E A Y D + D+L + ++ ++ T Sbjct: 454 KELNYVIEYGEAAFYGPKLDFM---VKDALGRSWQLGTIQVDYNLP--------ERFDLT 502 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +KG+D + H + G+M A++ G +W + + + + Sbjct: 503 YKGSDNELHRPVMIHRAPFGSMERFIAILLEHTGGNFPLWLMTEQAILLPV------SEK 556 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + +K+ L D+ E +G + A++ P +I+G + D V ++ Sbjct: 557 YENYGKKVLTLLENHEIRAQIDNRNETVGKKIREAEMSKVPFMLIIGEQEEKDGTVSVRR 616 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 G +++E + +N+ Sbjct: 617 HGVGDIGTLTMEAFADMVKEEINNS 641 >gi|254427770|ref|ZP_05041477.1| prolyl-tRNA synthetase [Alcanivorax sp. DG881] gi|196193939|gb|EDX88898.1| prolyl-tRNA synthetase [Alcanivorax sp. DG881] Length = 572 Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats. Identities = 125/291 (42%), Positives = 175/291 (60%), Gaps = 6/291 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L ++E P DA + SH+LMLR GM+ + + G+Y+WLP G + L V +IREE Sbjct: 1 MRTSQYLLATVKETPADAVVTSHQLMLRAGMVRKLASGLYTWLPSGLRVLRKVEQVIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P +Q +LW ESGR +YG E+LR+ DR++ GPTHEEV+TD+ R+ Sbjct: 61 MDRAGAQEVLMPVVQPMELWEESGRAPAYGPELLRITDRHNNPFCLGPTHEEVITDMVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFG+MRSREF+MKDAYSF + +Y M + Sbjct: 121 ELHSYKQLPANFYQIQTKFRDEIRPRFGIMRSREFIMKDAYSFHTNMDSLADTYQIMHRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----N 236 Y IF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCAIFDRLGLDYRPVEADTGAIGGAASHEFHVLAESGEDDIAFSD-GSDYAANVELAEAL 239 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN-KRVSARGIEVGH 286 + + + +E P A T + + + + K + +G E G Sbjct: 240 APAIERPAPGAAMETVDTPNARTIEELVAQFDLPIEKTIKTLVVKGAEEGQ 290 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 114/210 (54%), Gaps = 4/210 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLP 297 +D +I + +D+ N D P+ RGIEVGHIF GTKYS Sbjct: 363 EDGKHHFNINWERDVALPQIADLRNVVNGDPSPDGTGTLSIKRGIEVGHIFQLGTKYSEA 422 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-A 356 + AT +GK + MG YGIG RVVAA IE ++D +GIIWP+++APF+++LI + Sbjct: 423 LGATVLDENGKSVVMPMGCYGIGVTRVVAAAIEQNNDDRGIIWPEAIAPFQVALIPVNIK 482 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 R+ E +YA L+ G +V +DD E++G + A ++L+G P ++++ + + + Sbjct: 483 KSPRERELAETLYAELTAAGIEVIFDDREKERLGVKLADSELIGIPHRIVIAERGMDNGV 542 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRFSNN 445 +E K R + ++ ++ V+ + + N Sbjct: 543 LEYKGRGDADKTEVPVDVVVAFIKGKLGTN 572 >gi|253988145|ref|YP_003039501.1| prolyl-tRNA synthetase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779595|emb|CAQ82756.1| prolyl-tRNA synthetase [Photorhabdus asymbiotica] Length = 574 Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats. Identities = 133/278 (47%), Positives = 176/278 (63%), Gaps = 18/278 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SHKLMLR GMI + + G+Y+W+P G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVVSHKLMLRAGMIRKLASGLYNWMPTGIRVLKKVEKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR ADR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRFADRGDRPFVLGPTHEEVVTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP T +QIQ KFRDE+RPRFGVMRSREFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EVSSYKQLPLTLFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTTQESLQETYDNMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC---------------SK 225 Y +IF R+GL + A++G IGG SHEF VLA +GE + Sbjct: 181 YSKIFTRIGLDFRAVLADTGSIGGSASHEFQVLAASGEDDIVFSTESNYAANIELAEAVA 240 Query: 226 DFMDFPIPSENTDFDDI---ISLNSIVEQWTAPYAATS 260 D P+E+ D ++ +VEQ+ P T Sbjct: 241 PAYDRAAPAEDMYLVDTPNAKTIAELVEQFNLPIEKTV 278 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 76/205 (37%), Positives = 118/205 (57%), Gaps = 3/205 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D I + P +D+ N D+ P+ K + RGIEVGHIF GTKYS M Sbjct: 366 DDKHYFGINWERDLPIPEIADIRNVVEGDASPDGKGTLLIKRGIEVGHIFQLGTKYSDAM 425 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 AT +G DG + + MG YGIG R+VAA IE +HD +GIIWPD++APF+++++ + H Sbjct: 426 KATVQGEDGHNQIITMGCYGIGVTRIVAAAIEQNHDNRGIIWPDAIAPFQVAILPMNMHK 485 Query: 359 QV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 ++ EK+YA L G DV +DD E+ G FA +L+G P +++G + + +VE Sbjct: 486 SYRVKEIAEKLYADLRACGIDVIFDDRKERPGVMFADMELIGVPHTIVIGDRNLDSGEVE 545 Query: 418 IKHRLTGIREDMSLEEVINYASHRF 442 K+R ++ + L+ V+++ + Sbjct: 546 YKYRRCDDKQMLKLDCVVDHLKQQL 570 >gi|293569265|ref|ZP_06680563.1| threonyl-tRNA synthetase [Enterococcus faecium E1071] gi|291587971|gb|EFF19821.1| threonyl-tRNA synthetase [Enterococcus faecium E1071] Length = 646 Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats. Identities = 78/448 (17%), Positives = 161/448 (35%), Gaps = 34/448 (7%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIRE 59 + K ++ + +E RD +L L M+ + G+ WLP G + I + Sbjct: 225 KALKEYIRLREEAKERDHRKLGKELDLF--MVSPEVGSGLPFWLPKGATIRRTIERYIVD 282 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIF 118 ++ G + P + +L+ SG +D Y ++M D D M + P + ++ Sbjct: 283 KEVSLGYQHVYTPIMGDVELYKTSGHWDHYQEDMFPPMDMGDGEMLVLRPMNCPHHMMVY 342 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 ++ I SYR LP ++ + R E ++ + + + P+ K + + Sbjct: 343 KNTIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTL 402 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NT 237 + ++ + R D T + D M + Sbjct: 403 ELMVAVYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKA 448 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D++ E A Y DV ++ +L + +S ++ F ++ Sbjct: 449 AMDELELDYFEAEGEAAFYGPKLDV---QVKTALGTEETLSTIQLD----FLLPERFD-- 499 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ G DG++ + + + G + + + + +P +AP + ++I + Sbjct: 500 --LTYVGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV- 555 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D +I RL G V DD E++G + + P Q++VG K + D+ V Sbjct: 556 -DAHGDYAYEIKERLQMKGLRVEVDDRNEKMGYKIRASQTQKIPYQLVVGDKELEDATVN 614 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ + L I+ N Sbjct: 615 VRRYGSKETAVEDLNIFIDAMEAEVKNY 642 >gi|212636240|ref|YP_002312765.1| prolyl-tRNA synthetase [Shewanella piezotolerans WP3] gi|212557724|gb|ACJ30178.1| Prolyl-tRNA synthetase, bacterial [Shewanella piezotolerans WP3] Length = 596 Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats. Identities = 124/240 (51%), Positives = 163/240 (67%), Gaps = 1/240 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YSWLP G + L + AI+REE Sbjct: 27 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSWLPTGLRVLRKIEAIVREE 86 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ G++E+ +P +Q ADLW E+GR+D +G E+LR DR+++ + GPTHEEV+TDI R Sbjct: 87 MNKAGSVEILMPMVQPADLWQETGRFDKFGPELLRFQDRHNRDFVLGPTHEEVITDIVRK 146 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREFLMKDAYSF L E +Y MF + Sbjct: 147 EVNSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHLEQECMDETYEAMFQA 206 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y I RLGL P+ A++G IGG LSHEF VLA++GE + D+ E + Sbjct: 207 YNNILTRLGLSFRPVMADTGSIGGSLSHEFHVLANSGEDLIAY-STESDYAANIEKCEAP 265 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 69/204 (33%), Positives = 112/204 (54%), Gaps = 3/204 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPM 298 D I + P A D+ N ++ P K A RGIEVGHIF G+ YS M Sbjct: 391 DDKHYFGINWERDLPSAPAFDLRNIIEGEASPCGKGTIALLRGIEVGHIFQLGSNYSEAM 450 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 A +GK + MG YG+G R+VAA IE +HD +GIIWP+++APF++ ++ + Sbjct: 451 HANVLDQNGKSKTLLMGCYGVGVSRMVAAAIEQNHDDRGIIWPEAIAPFQVGILPMNMHK 510 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 +D E++Y L+ G +V +DD E+ G FA +L+G P V++G + + + E Sbjct: 511 SHRVKDMAEQLYQDLTDAGMEVLFDDRKERAGVMFADMELVGLPNVVVIGDRNIDNGVFE 570 Query: 418 IKHRLTGIREDMSLEEVINYASHR 441 K+R TG ++D+ ++++ + + Sbjct: 571 YKNRRTGEKQDVPFDQIVEFLKAQ 594 >gi|52081397|ref|YP_080188.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52786773|ref|YP_092602.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|319647305|ref|ZP_08001527.1| threonyl-tRNA synthetase 1 [Bacillus sp. BT1B_CT2] gi|52004608|gb|AAU24550.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52349275|gb|AAU41909.1| ThrS [Bacillus licheniformis ATCC 14580] gi|317390652|gb|EFV71457.1| threonyl-tRNA synthetase 1 [Bacillus sp. BT1B_CT2] Length = 643 Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats. Identities = 85/427 (19%), Positives = 157/427 (36%), Gaps = 33/427 (7%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L + +G+ WLP G + I +++ G + P Sbjct: 241 AKERDHRKLGKELKLFAN-SQKVGQGLPLWLPKGATIRRVIERYIVDKELALGYEHVYTP 299 Query: 73 TLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 L S DL+ SG +D Y M + +++ ++ P + I+++ I SYR LP Sbjct: 300 VLGSKDLYETSGHWDHYQDGMFPPMEMDNETLVLRPMNCPHHMMIYKNDIHSYRELPIRI 359 Query: 133 YQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 ++ R E+ G+ R R + DA+ F + + ++ GL+ Sbjct: 360 AELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTVR-LIQDVYEDFGLE 418 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIISLNSIVE 250 R D +T+ + D M S D+I E Sbjct: 419 EYSFRLS--------------YRDPEDTEKYYDDDEMWNKAQSMLKEAMDEIGHDYYEAE 464 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y DV ++ ++ + + +S ++ F K+ T+ G DGK H Sbjct: 465 GEAAFYGPKLDV---QVKTAIGKEETLSTVQLD----FLLPEKFD----LTYVGEDGKPH 513 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + G + + + + P +AP + +I + V D +K+ Sbjct: 514 RPVVIHR--GVVSTMERFVAFLIEEHKGALPTWLAPVQFQVIPVSP--SVHLDYAKKVQE 569 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 RL + G V D E+IG + A + P ++VG + V + V ++ E ++ Sbjct: 570 RLQREGLRVEVDTRDEKIGYKIREAQMQKIPYMLVVGDQEVENEAVNVRKYGEQKSETVA 629 Query: 431 LEEVINY 437 + + I Sbjct: 630 IADFIKK 636 >gi|261208968|ref|ZP_05923373.1| threonyl-tRNA synthetase [Enterococcus faecium TC 6] gi|289565220|ref|ZP_06445672.1| threonyl-tRNA synthetase [Enterococcus faecium D344SRF] gi|294615018|ref|ZP_06694907.1| threonyl-tRNA synthetase [Enterococcus faecium E1636] gi|260077007|gb|EEW64729.1| threonyl-tRNA synthetase [Enterococcus faecium TC 6] gi|289163041|gb|EFD10889.1| threonyl-tRNA synthetase [Enterococcus faecium D344SRF] gi|291592149|gb|EFF23769.1| threonyl-tRNA synthetase [Enterococcus faecium E1636] Length = 647 Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats. Identities = 78/448 (17%), Positives = 161/448 (35%), Gaps = 34/448 (7%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIRE 59 + K ++ + +E RD +L L M+ + G+ WLP G + I + Sbjct: 225 KALKEYIRLREEAKERDHRKLGKELDLF--MVSPEVGSGLPFWLPKGATIRRTIERYIVD 282 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIF 118 ++ G + P + +L+ SG +D Y ++M D D M + P + ++ Sbjct: 283 KEVSLGYQHVYTPIMGDVELYKTSGHWDHYQEDMFPPMDMGDGEMLVLRPMNCPHHMMVY 342 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 ++ I SYR LP ++ + R E ++ + + + P+ K + + Sbjct: 343 KNTIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTL 402 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NT 237 + ++ + R D T + D M + Sbjct: 403 ELMVAVYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKA 448 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D++ E A Y DV ++ +L + +S ++ F ++ Sbjct: 449 AMDELELDYFEAEGEAAFYGPKLDV---QVKTALGTEETLSTIQLD----FLLPERFD-- 499 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ G DG++ + + + G + + + + +P +AP + ++I + Sbjct: 500 --LTYVGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV- 555 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D +I RL G V DD E++G + + P Q++VG K + D+ V Sbjct: 556 -DAHGDYAYEIKERLQMKGLRVEVDDRNEKMGYKIRASQTQKIPYQLVVGDKELEDATVN 614 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ + L I+ N Sbjct: 615 VRRYGSKETAVEDLNIFIDAMEAEVKNY 642 >gi|256026433|ref|ZP_05440267.1| threonyl-tRNA synthetase [Fusobacterium sp. D11] gi|289764445|ref|ZP_06523823.1| threonyl-tRNA synthetase [Fusobacterium sp. D11] gi|289716000|gb|EFD80012.1| threonyl-tRNA synthetase [Fusobacterium sp. D11] Length = 637 Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats. Identities = 82/443 (18%), Positives = 166/443 (37%), Gaps = 41/443 (9%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + K+ + + RD +L L + ++ G +LP G + + + R+E Sbjct: 226 KLKKHLKLVEEAEKRDHRKLGKELELF--FLSEYGPGFPFFLPKGMIVRNVLVDLWRKEH 283 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G +++ P + + +LW SG + +Y + M ++ ++ P + F+ Sbjct: 284 EKAGYLQLETPIMLNKELWEISGHWFNYRENMYT-SEIDEVEFAIKPMNCPGGVLAFKHQ 342 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP ++ R E G+MR R F D++ F +TP+ + + Sbjct: 343 LHSYKDLPARLAELGKVHRHEFSGALHGLMRVRSFTQDDSHIF-MTPDQVQDEIIGVVNL 401 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + + +L + + P S E D + D Sbjct: 402 IDKFYSKLFGFEYEIELSTKPEKAIGSQE-----------------IWDMAESALAGALD 444 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I A Y D K+ D++ + ++ F ++ Sbjct: 445 KLGRKYKINPGDGAFYGPKLDF---KIKDAIGRMWQCGTIQLD----FNLPERFD----V 493 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 T+ G DG+ H + G++ ++ + G +W V +++ + Sbjct: 494 TYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFPMWLAPVQVKVMTI------ND 547 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEI 418 C ++I A+L K+G DD E IG + A+ P+Q+I+G V + +V I Sbjct: 548 ECVPYAKEIMAKLDKLGIRAELDDRTETIGYKIREANGRYRIPMQLIIGKNEVENKEVNI 607 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + + SL+E NY Sbjct: 608 RRFGSKDQFSKSLDEFYNYVVDE 630 >gi|257792203|ref|YP_003182809.1| prolyl-tRNA synthetase [Eggerthella lenta DSM 2243] gi|257476100|gb|ACV56420.1| prolyl-tRNA synthetase [Eggerthella lenta DSM 2243] Length = 578 Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats. Identities = 109/234 (46%), Positives = 161/234 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ + P L+E+P DAEIASH+L+LR G I + + G+Y++LPLG++ L V I+REE Sbjct: 1 MRMSQLYAPTLKEDPADAEIASHRLLLRAGFIRKTASGVYTFLPLGKRVLAKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P LQ +LW ESGR++ YG E++RL DR+D+ GPTHEE++T + R+ Sbjct: 61 MDGIGAQEIMMPALQPGELWHESGRWNDYGPELMRLVDRHDREFCLGPTHEELITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP + YQIQ+KFRDE+RPRFG++RSREF+MKDAYSF E + +Y+ M + Sbjct: 121 ELRSYKELPLSLYQIQVKFRDEIRPRFGLLRSREFIMKDAYSFHADQESLQKTYDDMSEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS 234 Y RI R+G+ P+ A+ G IGG ++ EF+ LA+ GE ++ + Sbjct: 181 YGRICDRMGMDYRPVEADPGQIGGSVTCEFMALAEAGEAELVHCTCGYAANTEA 234 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 74/184 (40%), Positives = 107/184 (58%), Gaps = 2/184 (1%) Query: 258 ATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ + DS P RGIEV +F G KYS M ATF DG + MG Sbjct: 374 EWADLCIVQPGDSCPSCGLPLDGARGIEVSQVFQLGDKYSKAMGATFMAEDGSEQPFLMG 433 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YG+G R +AA++E +D GI+WP +VAP + +I + D + A EK+ + L+K+ Sbjct: 434 CYGVGISRTMAAIVEQHNDENGIMWPLTVAPAHVCVIPLTVGDDEVQPAAEKLASDLAKL 493 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G +FA ADL+G+PLQVIVG + +++ KVEIK R TG R D+ L + Sbjct: 494 GLEVVIDDRKERAGVKFADADLIGWPLQVIVGKRGLAEQKVEIKRRSTGARRDIPLAALT 553 Query: 436 NYAS 439 + + Sbjct: 554 DALA 557 >gi|332974215|gb|EGK11148.1| proline--tRNA ligase [Kingella kingae ATCC 23330] Length = 570 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 119/239 (49%), Positives = 163/239 (68%), Gaps = 1/239 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLMLR G+I ++ G+Y+W+P+G + L V AI+REE Sbjct: 1 MKASQFFISTLKEAPAEASLASHKLMLRAGLIKANASGLYTWMPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q ADLW ESGR+D YG E+LR+ DR++ + PT EE++TDI R Sbjct: 61 MNRAGAIELLMPVVQPADLWKESGRWDFYGDELLRITDRHENPFCFSPTCEEMITDIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FY I KFRDE RPRFGVMR+REF+MKDAYSF + K +Y M+ + Sbjct: 121 EVNSYKQLPKNFYHINTKFRDERRPRFGVMRAREFVMKDAYSFHADFDSLKETYQNMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y R+F+RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCRVFNRLGLNFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDR-SDYAANVELAQT 238 Score = 165 bits (417), Expect = 2e-38, Method: Composition-based stats. Identities = 68/227 (29%), Positives = 107/227 (47%), Gaps = 7/227 (3%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQW----TAPYAATSDVHNEKLFDS--LPENKRVS 278 K + DF + + A D+ N D Sbjct: 344 KVYADFATEKGADWVIGANVDDYHYTGFNFGRDAAEPEFVDLRNVVEGDPSPCGSGSLKL 403 Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KYS M+ATF +GK ++MG YGIG R+VAA IE ++D +GI Sbjct: 404 ARGIEVGHVFQLRDKYSKAMNATFLDNNGKSQIMEMGCYGIGVTRIVAAAIEQNNDERGI 463 Query: 339 IWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IW D+++PF + ++ + + A +KIYA+L G DV DD E+ G ++L Sbjct: 464 IWTDAMSPFTVVIVPMNYKKSDDVKAAADKIYAQLQAAGVDVLLDDRDERAGVLLNDSEL 523 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 LG P +V++G + + + VE R + +S+ +++ + Sbjct: 524 LGIPHRVVIGDRALKEGNVEYAQRRDTESQAISVNDIVAKIVATLTK 570 >gi|157962084|ref|YP_001502118.1| threonyl-tRNA synthetase [Shewanella pealeana ATCC 700345] gi|189083623|sp|A8H4U6|SYT_SHEPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157847084|gb|ABV87583.1| threonyl-tRNA synthetase [Shewanella pealeana ATCC 700345] Length = 642 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 74/439 (16%), Positives = 143/439 (32%), Gaps = 40/439 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + + + G+ W G + IR++ + Sbjct: 233 LNRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWSLFLELEKFIRQKLGQYTY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y + M ++ P + IF +KSYR Sbjct: 291 QEVKGPLMMDRVLWERSGHWDKYSEAMFT-TSSENREYAVKPMNCPGHVQIFNQGLKSYR 349 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F + + + + Sbjct: 350 DLPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVQQE-VSACIKMVYDTY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G SI ++ + P E D + Sbjct: 409 ETFGFNSIVVKLSTRPEKRIGDDE-----------------MWDRAEEALKQALKANDIE 451 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I+ A Y + L D L + ++ G AT+ Sbjct: 452 FEILPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDYALPGRLG--------ATYVAE 500 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D + +G++ ++ + +P ++P ++ ++NI D Sbjct: 501 DNSRQTPVMIHRAILGSLERFLGILI---EEYAGKFPAWLSPVQVVVMNITDK---QSDY 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ + G D E+IG + L P ++VG + + + +V ++ R Sbjct: 555 VDEVVNLFKEHGIRATKDLRNEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRTREGV 614 Query: 425 IREDMSLEEVINYASHRFS 443 M +EE ++ S Sbjct: 615 DLGKMQIEEFATKLKNQIS 633 >gi|53720607|ref|YP_109593.1| prolyl-tRNA synthetase [Burkholderia pseudomallei K96243] gi|76808687|ref|YP_334889.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1710b] gi|121599492|ref|YP_991789.1| prolyl-tRNA synthetase [Burkholderia mallei SAVP1] gi|124386640|ref|YP_001027282.1| prolyl-tRNA synthetase [Burkholderia mallei NCTC 10229] gi|126449387|ref|YP_001082781.1| prolyl-tRNA synthetase [Burkholderia mallei NCTC 10247] gi|126455301|ref|YP_001067757.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1106a] gi|134280246|ref|ZP_01766957.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 305] gi|167920563|ref|ZP_02507654.1| prolyl-tRNA synthetase [Burkholderia pseudomallei BCC215] gi|217421246|ref|ZP_03452751.1| proline--tRNA ligase [Burkholderia pseudomallei 576] gi|242316379|ref|ZP_04815395.1| proline--tRNA ligase [Burkholderia pseudomallei 1106b] gi|251766621|ref|ZP_02264460.2| proline--tRNA ligase [Burkholderia mallei PRL-20] gi|254178869|ref|ZP_04885523.1| prolyl-tRNA synthetase [Burkholderia mallei ATCC 10399] gi|254180577|ref|ZP_04887175.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1655] gi|254190985|ref|ZP_04897491.1| prolyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237] gi|254199071|ref|ZP_04905486.1| prolyl-tRNA synthetase [Burkholderia pseudomallei S13] gi|254258028|ref|ZP_04949082.1| proline--tRNA ligase [Burkholderia pseudomallei 1710a] gi|81824656|sp|Q63QM5|SYP_BURPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114152176|sp|Q3JNG4|SYP_BURP1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|166980105|sp|A3MR95|SYP_BURM7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|166980106|sp|A2S5R3|SYP_BURM9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|166980107|sp|A1V0N6|SYP_BURMS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|166980108|sp|A3NZI6|SYP_BURP0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|52211021|emb|CAH37009.1| prolyl-tRNA synthetase [Burkholderia pseudomallei K96243] gi|76578140|gb|ABA47615.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1710b] gi|121228302|gb|ABM50820.1| prolyl-tRNA synthetase [Burkholderia mallei SAVP1] gi|124294660|gb|ABN03929.1| proline--tRNA ligase [Burkholderia mallei NCTC 10229] gi|126228943|gb|ABN92483.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1106a] gi|126242257|gb|ABO05350.1| proline--tRNA ligase [Burkholderia mallei NCTC 10247] gi|134248253|gb|EBA48336.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 305] gi|157938659|gb|EDO94329.1| prolyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237] gi|160694783|gb|EDP84791.1| prolyl-tRNA synthetase [Burkholderia mallei ATCC 10399] gi|169656901|gb|EDS88298.1| prolyl-tRNA synthetase [Burkholderia pseudomallei S13] gi|184211116|gb|EDU08159.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1655] gi|217396658|gb|EEC36675.1| proline--tRNA ligase [Burkholderia pseudomallei 576] gi|242139618|gb|EES26020.1| proline--tRNA ligase [Burkholderia pseudomallei 1106b] gi|243065285|gb|EES47471.1| proline--tRNA ligase [Burkholderia mallei PRL-20] gi|254216717|gb|EET06101.1| proline--tRNA ligase [Burkholderia pseudomallei 1710a] Length = 578 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 131/235 (55%), Positives = 169/235 (71%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKQNEFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD E K SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDHESLKESYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y+RIF R+GL+ P+ A++G IGG SHEF V+ADTGE + DF E Sbjct: 181 YVRIFTRIGLEFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPT-SDFAANVE 234 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 70/179 (39%), Positives = 101/179 (56%), Gaps = 3/179 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPVVADIRNVKAGDPSPDGKGALDICRGIEVGHVFQLGTKYSDAMGATFIDESGKAQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE + D KGI+WP+++APF++ L + R+A +K+YA Sbjct: 442 VMGCYGIGITRILGAAIEQNFDDKGIVWPEAIAPFEVVLCPMGYDRSDAVREAADKLYAD 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R + Sbjct: 502 LAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGRRDAEATLLP 560 >gi|295677734|ref|YP_003606258.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1002] gi|295437577|gb|ADG16747.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1002] Length = 578 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 138/277 (49%), Positives = 180/277 (64%), Gaps = 5/277 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIISHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEKYGPELLRFKDRRQGDFVLGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD EG + SY KM+ + Sbjct: 121 QIKSYRQLPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDAEGLRESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y+RIF RLGL+ + A++G IGG SHEF V+ADTGE + DF E D Sbjct: 181 YVRIFTRLGLEFRAVAADNGSIGGSGSHEFHVIADTGEDAIAYC-PSSDFAANVEAADAL 239 Query: 240 ---DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + +++ P A + E L L Sbjct: 240 PLIAQRAAPAEDMKKTATPGKAKCEAVAELLNIPLER 276 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 71/192 (36%), Positives = 105/192 (54%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K V RGIEVGH+F GTKYS M+AT GK + Sbjct: 382 PEPVVADIRNVKKGDPSPDGKGVLDICRGIEVGHVFQLGTKYSEAMNATCLDETGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 +MG YGIG R++ A IE + D KGIIWP+S+APF++ L + R+ +K+YA Sbjct: 442 EMGCYGIGVTRILGAAIEQNFDDKGIIWPESIAPFEVVLCPMGYDRSDAVREQADKLYAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R + + Sbjct: 502 LAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGDRGLKDGKIEYQGRRDAEATLLPV 561 Query: 432 EEVINYASHRFS 443 + + Sbjct: 562 ADAAQTVIDKVR 573 >gi|237813889|ref|YP_002898340.1| proline--tRNA ligase [Burkholderia pseudomallei MSHR346] gi|237505775|gb|ACQ98093.1| proline--tRNA ligase [Burkholderia pseudomallei MSHR346] Length = 578 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 131/235 (55%), Positives = 169/235 (71%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKQNEFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD E K SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDHESLKESYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y+RIF R+GL+ P+ A++G IGG SHEF V+ADTGE + DF E Sbjct: 181 YVRIFTRIGLEFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPT-SDFAANVE 234 Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 70/179 (39%), Positives = 101/179 (56%), Gaps = 3/179 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPVVADIRNVKAGDPSPDGKGALDICRGIEVGHVFQLGTKYSDAMGATFIDESGKAQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE + D KGI+WP+++APF++ L + R+A +K+YA Sbjct: 442 VMGCYGIGITRILGAAIEQNFDDKGIVWPEAIAPFEVVLCPMGYDRSDAVREAADKLYAD 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R + Sbjct: 502 LAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGRRDAEATLLP 560 >gi|257139340|ref|ZP_05587602.1| threonyl-tRNA synthetase [Burkholderia thailandensis E264] Length = 593 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 73/406 (17%), Positives = 139/406 (34%), Gaps = 41/406 (10%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L I + + G+ W P G V +R + G Sbjct: 226 YLHMLEEAEKRDHRKLGKQLDLF--HIQEEAPGMVFWHPKGWTLWQRVEQYMRRRLDAAG 283 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + +Y + M + + P + +F+ ++SY Sbjct: 284 YLEIKTPMIMDRSLWEASGHWQNYRENMFT-TESEKRDYAIKPMNCPGHVQVFKHGLRSY 342 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F+ DA+ F + + + + + Sbjct: 343 RDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQINSEAIAFN-KLAMSV 401 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P S E A+ G + +P E Sbjct: 402 YEDFGFDRIDIKLSLRPEQRMGSDETWDHAEEGLRNALKACGLEWEELPGE--------- 452 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + H + D+L + + +++ G A + Sbjct: 453 --------GAFYGPKIEYH---IKDALGRSWQCGTLQLDMMLPERLG--------AEYVA 493 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+M ++ H G W +++ + + Sbjct: 494 EDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPAWLAPFHAVVLNIA------ESQAE 547 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 + + L K G V D E+I + L P +++G K Sbjct: 548 YAQTVVQSLQKQGLRVSADLRNEKISYKIREHTLEKVPYLLVLGDK 593 >gi|126440120|ref|YP_001060493.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 668] gi|166980109|sp|A3NDS2|SYP_BURP6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|126219613|gb|ABN83119.1| proline--tRNA ligase [Burkholderia pseudomallei 668] Length = 578 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 131/235 (55%), Positives = 169/235 (71%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKQNEFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD E K SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDHESLKESYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y+RIF R+GL+ P+ A++G IGG SHEF V+ADTGE + DF E Sbjct: 181 YVRIFTRIGLEFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPT-SDFAANVE 234 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 70/179 (39%), Positives = 101/179 (56%), Gaps = 3/179 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPVVADIRNVKAGDPSPDGKGALDICRGIEVGHVFQLGTKYSDAMGATFIDESGKAQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE + D KGI+WP+++APF++ L + R+A +K+YA Sbjct: 442 VMGCYGIGITRILGAAIEQNFDDKGIVWPEAIAPFEVVLCPMGYDRSDAVREAADKLYAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R + Sbjct: 502 LAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGRRDAEATLLP 560 >gi|194335337|ref|YP_002017131.1| threonyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1] gi|238693365|sp|B4SB93|SYT_PELPB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|194307814|gb|ACF42514.1| threonyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1] Length = 657 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 75/450 (16%), Positives = 150/450 (33%), Gaps = 42/450 (9%) Query: 2 RRSKYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + L+E R D +L L + + G+ WLP G + + ++EE Sbjct: 237 KLLKEHVARLEEAKRRDHRKLGAELELFM-LSPEVGSGLPIWLPKGAIIRNELETFLKEE 295 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-----MIYGPTHEEVMT 115 Q + G + + P + + +L+ SG Y Y +D+ + P + Sbjct: 296 QRKRGYLPVYTPHIGNIELYKRSGHYPYYSDSQFPPLTYHDEEGKQEQYLLKPMNCPHHH 355 Query: 116 DIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSY 174 I+ S ++SYR+LP + +R E G++R+R F D++ + + Sbjct: 356 LIYSSKMRSYRDLPLRLTEFGTVYRHEQSGELNGLVRARGFTQDDSHIYCRPDQLVDE-I 414 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIP 233 +F LG + R + D + + + + Sbjct: 415 CSAIELTQFVFGTLGFSEVQTRLS--------------MHDPENQAKYGGTAEVWEQAEK 460 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 D + I + Y D + D+L ++ ++ Sbjct: 461 DVQEAADRMGIDYFIGVGEASFYGPKIDFI---VRDALGRKWQLGTVQVDYVMP------ 511 Query: 294 YSLPMSATFKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 T+ G+DG+ H + G+M V+ G +W V + + Sbjct: 512 --ERFDLTYTGSDGQKHRPVVIHRAPFGSMERFIGVLIEHTAGNFPLWLAPVQAVVLPIA 569 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 + D + ++ L G D E+IG + A++ P +++G K Sbjct: 570 ------EDVLDYAKSVHQALLAAGIRAELDTRSEKIGKKIRDAEVSKIPCMIVIGQKEQE 623 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYASHRF 442 +V ++ G S+ +I Sbjct: 624 SGEVSLRRHRIGDEGRFSVSGLIEKLKTEI 653 >gi|238784905|ref|ZP_04628905.1| Prolyl-tRNA synthetase [Yersinia bercovieri ATCC 43970] gi|238714222|gb|EEQ06234.1| Prolyl-tRNA synthetase [Yersinia bercovieri ATCC 43970] Length = 572 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 123/235 (52%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EINSYKQLPLNFFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+ L + A++G IGG SHEF VLA++GE + D+ E Sbjct: 181 YSKIFERMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVF-STDSDYAANIE 234 Score = 174 bits (441), Expect = 3e-41, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 115/206 (55%), Gaps = 3/206 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D I + P +D+ N D P+ K RGIEVGHIF GTKYS M Sbjct: 366 DDKHYFGINWERDLPLPQVADLRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGTKYSEAM 425 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 AT +G DG++ + MG YGIG RVVAA IE ++D +GIIWPD++APF+++++ + H Sbjct: 426 KATVQGEDGRNQVMTMGCYGIGVSRVVAAAIEQNYDNRGIIWPDAIAPFQVAILPMNMHK 485 Query: 359 Q-VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 ++ E++Y L G DV DD E+ G FA +L+G P +++G + + +VE Sbjct: 486 SFRVKELAEELYVTLRSHGIDVILDDRKERPGVMFADMELIGVPHNIVIGDRNLDSEEVE 545 Query: 418 IKHRLTGIREDMSLEEVINYASHRFS 443 KHR G ++ + E+I++ + Sbjct: 546 YKHRRAGEKQMIKTSEIIDFLLSQIK 571 >gi|107021665|ref|YP_619992.1| prolyl-tRNA synthetase [Burkholderia cenocepacia AU 1054] gi|123072438|sp|Q1BZD6|SYP_BURCA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|105891854|gb|ABF75019.1| prolyl-tRNA synthetase [Burkholderia cenocepacia AU 1054] Length = 578 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 137/288 (47%), Positives = 183/288 (63%), Gaps = 5/288 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD G SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDAAGLNESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y+RIF RLGL+ + A+SG IGG+ SHEF V+ADTGE + +F E + Sbjct: 181 YVRIFTRLGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYCPT-SEFAANVEAAEAL 239 Query: 240 ---DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 + + +E+ P A + E L L + + Sbjct: 240 PLIAERAAPAEAMEKVATPGKAKCEAVAELLSIPLERTIKSIVLATDN 287 Score = 166 bits (420), Expect = 7e-39, Method: Composition-based stats. Identities = 71/179 (39%), Positives = 101/179 (56%), Gaps = 3/179 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +DV N K D P+ K V RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPEVADVRNVKKGDPSPDGKGVIDICRGIEVGHVFQLGTKYSEAMGATFLDESGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YG+G R++ A IE + D KGIIWP+S+APF++ L + + R+ +K+YA Sbjct: 442 LMGCYGVGITRILGAAIEQNFDDKGIIWPESIAPFEVVLCPMGYDRSDMVRETADKLYAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L G DV DD GE+ G FA +L+G P ++++G + + + K+E + R + Sbjct: 502 LVAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKEGKIEYQGRRDAEATLLP 560 >gi|311031377|ref|ZP_07709467.1| threonyl-tRNA synthetase [Bacillus sp. m3-13] Length = 643 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 80/437 (18%), Positives = 160/437 (36%), Gaps = 34/437 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L + +G+ WLP G + I +++ G Sbjct: 235 LRLLEEAKERDHRKIGKELDLF-FNSQKVGQGLPLWLPKGATIRRVIERYIVDKEVELGY 293 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P + S +L+ SG +D Y M + +++ ++ P + ++++ I SYR Sbjct: 294 DHVYTPVMGSVELYKTSGHWDHYQDGMFPPMEMDNEQLVLRPMNCPHHMMVYKNSIHSYR 353 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP ++ R E+ G+ R R + DA+ F + ++ L ++ Sbjct: 354 QLPVRIAELGTMHRYEMSGALAGLQRVRGMTLNDAHIFVRPDQIKDEL-KRVVNLVLEVY 412 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIIS 244 GL R D + + D M D++ Sbjct: 413 KDFGLDDYSFRLS--------------YRDPENKEKYFDDDAMWEKAQGMLKEAMDELGL 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y DV ++ +L + + +S ++ F K+ T+ G Sbjct: 459 DYFEAIDEAAFYGPKLDV---QVRTALGKEETLSTVQLD----FLLPEKFD----LTYVG 507 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DGK H + G + + + + +P +AP ++ +I + D Sbjct: 508 EDGKQHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVQVIPVSP--DAHFDY 563 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ L G V D+ E+IG + A + P +++G + + V ++ Sbjct: 564 AKEVQDLLKSKGIRVEMDERNEKIGYKIREAQMQKIPYMLVLGDNEIQERAVNVRKYGEQ 623 Query: 425 IREDMSLEEVINYASHR 441 E +SLE+ ++ Sbjct: 624 KSETISLEKFVDDLLKE 640 >gi|254470004|ref|ZP_05083408.1| threonyl-tRNA synthetase [Pseudovibrio sp. JE062] gi|211960315|gb|EEA95511.1| threonyl-tRNA synthetase [Pseudovibrio sp. JE062] Length = 648 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 77/440 (17%), Positives = 149/440 (33%), Gaps = 35/440 (7%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD ++ L + G+ W G + N+ +R Sbjct: 230 KAYLHMLEEAEKRDHRKLGREMDLY--HFQEEGPGVVFWHHKGWQLFQNLTNYMRRRLED 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E++ P + LW SG ++ Y + M + + P + IF+ +K Sbjct: 288 -DYQEVNAPQILDKALWETSGHWEWYRENMFATETEDHRVFAIKPMNCPGHVQIFKHGLK 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R E G+MR R F DA+ F + + + + Sbjct: 347 SYRDLPLRMAEFGAVSRYEPSGALHGLMRVRAFTQDDAHVFCTEEQMAAECHKIN-DLIM 405 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G + I ++ + P S E A+ +V E Sbjct: 406 SVYKDFGFEEIVVKLSTRPEKRVGSDEVWDHAEAVMGEVL-----------KEIEANSGG 454 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I+E A Y + L D++ + ++ FG A + Sbjct: 455 KIKTGILEGEGAFYGPKFEY---TLRDAIGREWQCGTTQVDFNLPERFG--------AFY 503 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 +DG+ + G++ ++ + G +W ++ Sbjct: 504 VDSDGEKKQPVMIHRAICGSLERFLGILIENFAGHFPLWLAPQHFVVAAIT------SDA 557 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++++A L K G D E+I + P+ + VG + + V I+ Sbjct: 558 DDYAKEVHAALKKAGLRGELDLRNEKINYKVREHSHAKIPVIIAVGKREAEEKTVSIRRL 617 Query: 422 LTGIREDMSLEEVINYASHR 441 + + M+L+E + Sbjct: 618 GSRNQTAMTLDEAVASLRDE 637 >gi|149909734|ref|ZP_01898386.1| prolyl-tRNA synthetase [Moritella sp. PE36] gi|149807248|gb|EDM67203.1| prolyl-tRNA synthetase [Moritella sp. PE36] Length = 573 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 125/237 (52%), Positives = 166/237 (70%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GM+ + + G+Y+WLP G + L V I+REE Sbjct: 1 MRSSNYLLSTLKETPNDAEVISHQLMLRAGMVRRLASGLYTWLPTGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+E +P +Q ADLW E+GR D +G E+LR+ DR++++ + GPTHEEV+TDI R Sbjct: 61 MDKAGAVETLMPMVQPADLWQETGRIDKFGPELLRINDRHNRSFVLGPTHEEVITDIARK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP T YQIQ KFRDE+RPRFGVMRSREFLMKDAYSF ++ E +YNKM + Sbjct: 121 EINSYKQLPLTLYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHISDECLNDTYNKMHTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF R+GL+ P+ A++G IGG +SHEF VLA++GE + S D+ E Sbjct: 181 YCNIFERIGLEYRPVLADTGSIGGAVSHEFHVLAESGEDDIVFSD-GSDYAANIEKA 236 Score = 177 bits (448), Expect = 4e-42, Method: Composition-based stats. Identities = 71/198 (35%), Positives = 107/198 (54%), Gaps = 1/198 (0%) Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 + T A E + RGIEVGHIF GT+Y+ M A Sbjct: 376 NWDRDITEYTVADIRNVVEGEASPCGKGTLSIKRGIEVGHIFQLGTQYAEAMKAGVLNMQ 435 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDAC 365 GK + MG YGIG R+VAA IE +HD GIIW +S+AP+K+S+I + ++A Sbjct: 436 GKQQIMTMGCYGIGVSRIVAAAIEQNHDENGIIWNESIAPYKVSIIPMNMHKSADVKEAA 495 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 EKIYA L G +VF+DD E+ G FA ++L+G P +I+G + + + VE K RLTG Sbjct: 496 EKIYADLQAAGIEVFFDDRKERPGVMFADSELIGIPHNIIIGDRSLKNGLVEHKLRLTGD 555 Query: 426 REDMSLEEVINYASHRFS 443 + ++++ +++ + + Sbjct: 556 KTEVAVADIVAHVKSLLA 573 >gi|77919019|ref|YP_356834.1| threonyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380] gi|123770467|sp|Q3A4P3|SYT_PELCD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|77545102|gb|ABA88664.1| Ser-tRNA(Thr) hydrolase [Pelobacter carbinolicus DSM 2380] Length = 638 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 86/444 (19%), Positives = 154/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y + + RD +L L + + G+ W P G + R E R Sbjct: 233 TYLNKLEEARKRDHRRIGRELDLFS-FSEEAGAGLVIWHPKGALLRTLLEDFERREHLRR 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + DLW SG +D+Y + M D + + P + I+++ +S Sbjct: 292 GYDIVMGPQILRTDLWKTSGHFDNYRENM-YFTDVDGQGYGIKPMNCLAHMLIYKARQRS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++++ R E G++R R F DA+ TP+ ++ Sbjct: 351 YRDLPLRYFELGTVHRHEKSGVLHGLLRVRGFTQDDAHIIC-TPDQLDEEIKRVLEFVRD 409 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + G E+ + T + S + + D+ Sbjct: 410 VMAIFG------------------FEYEIEISTRPEKSIGSDADWERATGALMNALKDLE 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + + E A Y D+ KL D+L + + + F ++ T+ Sbjct: 452 LPHDVNEGDGAFYGPKIDI---KLKDALDRRWQCATIQCD----FTLPERFD----LTYV 500 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG+ H + +GA+ V+ + G +W V I++ Sbjct: 501 GKDGEKHRPVMLHRVILGAIERFIGVLIEHYAGNFPLWLAPVQAVVINVT------DNQA 554 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D + + L G V D E++G + A + P ++VG +SD V + R Sbjct: 555 DYAKSVSDALRAAGVRVQCDLRNEKLGFKIREAQVDKIPYMLVVGDTEMSDGTVAPRFRS 614 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E MS E+ + R Sbjct: 615 GKNLEPMSPEDFARFVQEECDQYR 638 >gi|78186013|ref|YP_374056.1| threonyl-tRNA synthetase, class IIA [Chlorobium luteolum DSM 273] gi|78165915|gb|ABB23013.1| Ser-tRNA(Thr) hydrolase [Chlorobium luteolum DSM 273] Length = 677 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 77/451 (17%), Positives = 149/451 (33%), Gaps = 42/451 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K L L+E RD +L L + + G+ WLP G + +++E Sbjct: 257 KLLKEHLERLEEARKRDHRRLGQELKLFM-LSPEIGSGLPVWLPKGAIIRQELETFLKDE 315 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-----MIYGPTHEEVMT 115 Q R G + + P + + +L+ SG Y Y +D+ + P + Sbjct: 316 QRRRGYLPVYTPHIGNIELYKRSGHYPYYSDSQFPPLTYHDEDGKQEQYLLKPMNCPHHH 375 Query: 116 DIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSY 174 I+ S ++SYR+LP + +R E G++R+R F D++ + + Sbjct: 376 LIYSSEMRSYRDLPIRLTEFGTVYRHEQSGELNGLVRARGFTQDDSHIYCRPDQLVDE-I 434 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIP 233 +F LG ++ R + D + + + + Sbjct: 435 CNAIDLTQFVFRTLGFDAVETRLS--------------MHDPENQTKYGGTPEVWEQAEK 480 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 D + I + Y D + D+L ++ ++ Sbjct: 481 DVKEAADRMGIKYFIGIGEASFYGPKIDFI---VRDALGRKWQLGTVQVDYVMP------ 531 Query: 294 YSLPMSATFKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 T+ G DG+ H + G+M V+ G +W V + + Sbjct: 532 --ERFDLTYVGNDGQKHRPVVIHRAPFGSMERFIGVLIEHTAGNFPLWLAPVQAVVLPIA 589 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 + D + + G D E+IG + ++L P V+VG K Sbjct: 590 ------EDVHDYAAGVRNAMLAAGIRTELDLRSEKIGKKIRESELSKIPYMVVVGQKEEE 643 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 V ++ G +S++++I Sbjct: 644 KGAVSLRRHRKGDEGTLSIQDMIERLREEID 674 >gi|116688611|ref|YP_834234.1| prolyl-tRNA synthetase [Burkholderia cenocepacia HI2424] gi|170731910|ref|YP_001763857.1| prolyl-tRNA synthetase [Burkholderia cenocepacia MC0-3] gi|152016591|sp|A0K4B4|SYP_BURCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226699124|sp|B1JVA5|SYP_BURCC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116646700|gb|ABK07341.1| prolyl-tRNA synthetase [Burkholderia cenocepacia HI2424] gi|169815152|gb|ACA89735.1| prolyl-tRNA synthetase [Burkholderia cenocepacia MC0-3] Length = 578 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 137/288 (47%), Positives = 183/288 (63%), Gaps = 5/288 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD G SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDAAGLNESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y+RIF RLGL+ + A+SG IGG+ SHEF V+ADTGE + +F E + Sbjct: 181 YVRIFTRLGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYCPT-SEFAANVEAAEAL 239 Query: 240 ---DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 + + +E+ P A + E L L + + Sbjct: 240 PLIAERAAPAEAMEKVATPGKAKCEAVAELLSIPLERTIKSIVLATDN 287 Score = 166 bits (420), Expect = 7e-39, Method: Composition-based stats. Identities = 71/179 (39%), Positives = 101/179 (56%), Gaps = 3/179 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +DV N K D P+ K V RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPEVADVRNVKKGDPSPDGKGVIDICRGIEVGHVFQLGTKYSEAMGATFLDESGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YG+G R++ A IE + D KGIIWP+S+APF++ L + + R+ +K+YA Sbjct: 442 LMGCYGVGITRILGAAIEQNFDDKGIIWPESIAPFEVVLCPMGYDRSDMVRETADKLYAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L G DV DD GE+ G FA +L+G P ++++G + + + K+E + R + Sbjct: 502 LVAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKEGKIEYQGRRDAEATLLP 560 >gi|303232046|ref|ZP_07318749.1| proline--tRNA ligase [Veillonella atypica ACS-049-V-Sch6] gi|302513152|gb|EFL55191.1| proline--tRNA ligase [Veillonella atypica ACS-049-V-Sch6] Length = 572 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 122/290 (42%), Positives = 177/290 (61%), Gaps = 4/290 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK + P L+E P DA++ S +LMLR G + + + G+YS+LPLG +++ + AIIREE Sbjct: 1 MLASKLYAPTLREVPSDADVVSQQLMLRAGFMRKVANGLYSFLPLGWRSIKKIEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ +P LQ A++W ESGR+++YG EM+R+ DR+D GPTHEE++T + ++ Sbjct: 61 MDRSGAQEIMMPILQPAEIWKESGRWNAYGAEMMRINDRHDVEYCLGPTHEEMITTLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP YQIQ KFRDE RPR+G+MRSREF+MKD YSFD+ + SY M+ + Sbjct: 121 EINSYRQLPVNLYQIQSKFRDERRPRYGLMRSREFIMKDGYSFDIDDAAADVSYKNMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GL P+ A+SG IGG +HEF+ +A+ GE + D+ E Sbjct: 181 YSRIFTRCGLTFRPVEADSGAIGGSNTHEFMAIAEAGEADI-IHCSACDYAANIEIGKPG 239 Query: 241 DIISLNSIVEQWTA---PYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 + +++ P+A+T + E L L + + IE I Sbjct: 240 IMKQAEEALKELEVVDTPHASTIEAVAEMLNLPLEKTIKAVVYAIEDKVI 289 Score = 166 bits (419), Expect = 8e-39, Method: Composition-based stats. Identities = 65/177 (36%), Positives = 98/177 (55%), Gaps = 2/177 (1%) Query: 269 DSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D PE ++GIEVG +F GTKYS + AT+ +G+ + + MG YGIG R +A Sbjct: 394 DVCPECHSPLEYSKGIEVGQVFKLGTKYSESLQATYLDQNGRPNAMVMGCYGIGVSRTLA 453 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A IE HD GI+WP ++APF++ ++ I A D+ IY L DV DD + Sbjct: 454 AAIEQYHDENGIVWPRAIAPFEVVIVPINAKDEALMSTSTSIYDTLLNNKVDVLLDDRKD 513 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 + G +F ADL+G+PL++ V + ++VEI+ R TG + ++EV + S Sbjct: 514 RAGVKFKDADLIGYPLRITVSKNTLESNEVEIRVRKTGEAINCPIDEVSSKVQELLS 570 >gi|172036410|ref|YP_001802911.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142] gi|171697864|gb|ACB50845.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142] Length = 666 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 76/443 (17%), Positives = 148/443 (33%), Gaps = 38/443 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y + RD +L L + I + G+ W P G + R Sbjct: 258 YLTQKEEAQRRDHRKLGQQLKLFS--IQEDAGGGLVFWHPRGAMMRYLIEDYWRNAHLED 315 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + + DLW SG +D Y + M + P + ++ + S Sbjct: 316 GYQFLYTPHVANLDLWKTSGHWDFYRENMFEAMAVEHQTYQIKPMNCPFHVLTYKDDLHS 375 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR P + ++ +R E G+MR R F DA+ F L + + + + Sbjct: 376 YREFPLKWAELGTVYRYEKSGVLHGLMRVRGFTQDDAHIFCLPEQIADE-ILGVLNLTEK 434 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I G + + P S + ++ Sbjct: 435 ILSDFGFTDYEVNLSTRPEKS-----------------VGSDQVWQLATEALIKALNNKQ 477 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 A Y D+ K+ D++ + S ++ FG +Y Sbjct: 478 WNYLEDRGGGAFYGPKIDI---KIKDAIGRLWQCSTIQVDFNLPERFGMEY-------VA 527 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + G++ ++ + +P +AP ++ L+ + +D Sbjct: 528 ADGSRQQPIMIHRAIFGSLERFFGILI---ENYAGDFPLWLAPIQLRLLPV---SDEQQD 581 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + RL K G V D GE++G Q +++L P+ IVG + V + I+ R Sbjct: 582 YAKTVAIRLKKAGYRVEVDTSGERLGKQIRLSELEKIPVVAIVGKREVESQTLSIRTRQG 641 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 G +++ ++ +N + Sbjct: 642 GDLGTITVADLRERFKIAITNKK 664 >gi|322831614|ref|YP_004211641.1| prolyl-tRNA synthetase [Rahnella sp. Y9602] gi|321166815|gb|ADW72514.1| prolyl-tRNA synthetase [Rahnella sp. Y9602] Length = 572 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 164/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N AIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNANAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EVSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTTQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF+R+GL + A++G IGG SHEF VLA +GE V S DF E Sbjct: 181 YSQIFNRMGLDFRAVLADTGSIGGSASHEFQVLAQSGEDDVVFSDS-SDFAANIE 234 Score = 180 bits (457), Expect = 4e-43, Method: Composition-based stats. Identities = 77/193 (39%), Positives = 115/193 (59%), Gaps = 3/193 (1%) Query: 253 TAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A +D+ N D P+ + V RGIEVGHIF GTKYS M+AT +G DG++ Sbjct: 378 DAALPEVADIRNVVAGDPSPDGQGTLVIKRGIEVGHIFQLGTKYSEAMNATVQGEDGRNQ 437 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIY 369 + MG YGIG RVVAA IE +HD +GIIWPD++APF+++++ + H +DA E +Y Sbjct: 438 LMTMGCYGIGVTRVVAAAIEQNHDDRGIIWPDAIAPFQVAILPMNMHKSFRVKDAAEALY 497 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 L G DV DD E+ G FA +L+G P QV++G + + ++E K+R TG ++ + Sbjct: 498 KELRSHGIDVILDDRKERPGVMFADMELIGVPHQVVIGDRNLDAEELEYKNRRTGEKQMI 557 Query: 430 SLEEVINYASHRF 442 +++ Y + Sbjct: 558 KQSDIVEYLLSQI 570 >gi|194017903|ref|ZP_03056511.1| threonyl-tRNA synthetase [Bacillus pumilus ATCC 7061] gi|194010369|gb|EDW19943.1| threonyl-tRNA synthetase [Bacillus pumilus ATCC 7061] Length = 642 Score = 243 bits (621), Expect = 4e-62, Method: Composition-based stats. Identities = 84/445 (18%), Positives = 166/445 (37%), Gaps = 41/445 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 + Y I + + RD +L L M + + G+ +LP GQ + + A RE +N Sbjct: 230 LANYLHFIEEASKRDHRKLGKQLSLF--MFSEEAPGMPFYLPKGQIVRNELMAFSREVRN 287 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+S P + + +LW +SG +D Y + M ++ + + P + +F++++ Sbjct: 288 KAQYEEVSTPFMMNQELWEKSGHWDHYHENM-YFSEVDHTSFALKPMNCPGHMLMFKNNL 346 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+LP + R E G+ R R F DA+ F L + + ++F Sbjct: 347 YSYRDLPIRMAEFGQVHRHEFSGALNGLFRVRTFCQDDAHIF-LREDQIEAEIKRIFQLV 405 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G E+ V T + D + D Sbjct: 406 DHVYRTFG------------------FEYSVELSTRPEKALGDDAIWDISESALKNVLDR 447 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + E A Y D H + D+L + + + ++ F K+ T Sbjct: 448 LKVDYQLNEGDGAFYGPKIDFH---IKDALQRSHQCATIQLD----FQMPEKFD----LT 496 Query: 302 FKGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + + V + S G++ ++ G +W V I + + Sbjct: 497 YINEKNEKVRPVVIHSAIFGSLDRFFGILIEHFAGAFPLWLAPVQVQIIPVTTV------ 550 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D C ++ +L K+G V D+ E++G + A + P ++G + D + I+ Sbjct: 551 HLDHCLEVQQQLRKIGIRVTIDERDEKLGYKMREAQMQKIPYIAVIGDTEMQDKSLNIRQ 610 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 + + +E+ + A + N Sbjct: 611 HGEKASKQLFIEDFKHLAVQQIQNR 635 >gi|227550587|ref|ZP_03980636.1| threonine--tRNA ligase [Enterococcus faecium TX1330] gi|257888612|ref|ZP_05668265.1| threonyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|257897010|ref|ZP_05676663.1| threonyl-tRNA synthetase [Enterococcus faecium Com12] gi|257898951|ref|ZP_05678604.1| threonyl-tRNA synthetase [Enterococcus faecium Com15] gi|293378702|ref|ZP_06624860.1| threonine--tRNA ligase [Enterococcus faecium PC4.1] gi|293571021|ref|ZP_06682064.1| threonyl-tRNA synthetase [Enterococcus faecium E980] gi|227180295|gb|EEI61267.1| threonine--tRNA ligase [Enterococcus faecium TX1330] gi|257824666|gb|EEV51598.1| threonyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|257833575|gb|EEV59996.1| threonyl-tRNA synthetase [Enterococcus faecium Com12] gi|257836863|gb|EEV61937.1| threonyl-tRNA synthetase [Enterococcus faecium Com15] gi|291608947|gb|EFF38226.1| threonyl-tRNA synthetase [Enterococcus faecium E980] gi|292642630|gb|EFF60782.1| threonine--tRNA ligase [Enterococcus faecium PC4.1] Length = 647 Score = 243 bits (621), Expect = 4e-62, Method: Composition-based stats. Identities = 78/448 (17%), Positives = 161/448 (35%), Gaps = 34/448 (7%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIRE 59 + K ++ + +E RD +L L M+ + G+ WLP G + I + Sbjct: 225 KALKEYIRLREEAKERDHRKLGKELDLF--MVSPEVGSGLPFWLPKGATIRRTIERYIVD 282 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIF 118 ++ G + P + +L+ SG +D Y ++M D D M + P + ++ Sbjct: 283 KEVSLGYQHVYTPIMGDVELYKTSGHWDHYQEDMFPPMDMGDGEMLVLRPMNCPHHMMVY 342 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 ++ I SYR LP ++ + R E ++ + + + P+ K + + Sbjct: 343 KNAIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTL 402 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NT 237 + ++ + R D T + D M + Sbjct: 403 ELMVAVYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKA 448 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D++ E A Y DV ++ +L + +S ++ F ++ Sbjct: 449 AMDELELDYFEAEGEAAFYGPKLDV---QVKTALGTEETLSTIQLD----FLLPERFD-- 499 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ G DG++ + + + G + + + + +P +AP + ++I + Sbjct: 500 --LTYVGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV- 555 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D +I RL G V DD E++G + + P Q++VG K + D+ V Sbjct: 556 -DAHGDYAYEIKERLQMKGLRVEVDDRNEKMGYKIRASQTQKIPYQLVVGDKELEDATVN 614 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ + L I+ N Sbjct: 615 VRRYGSKETAVEDLNIFIDAMEAEVKNY 642 >gi|161525965|ref|YP_001580977.1| prolyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|189349316|ref|YP_001944944.1| prolyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|221202408|ref|ZP_03575440.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD2M] gi|221208132|ref|ZP_03581137.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD2] gi|221213248|ref|ZP_03586223.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD1] gi|226699126|sp|A9AI56|SYP_BURM1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|160343394|gb|ABX16480.1| prolyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|189333338|dbj|BAG42408.1| prolyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|221166700|gb|EED99171.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD1] gi|221172035|gb|EEE04477.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD2] gi|221177685|gb|EEE10100.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD2M] Length = 578 Score = 243 bits (621), Expect = 4e-62, Method: Composition-based stats. Identities = 137/287 (47%), Positives = 180/287 (62%), Gaps = 3/287 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPIGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAVELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD EG + SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDAEGLRESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+RIF RLGL+ + A+SG IGG+ SHEF V+ADTGE + Sbjct: 181 YVRIFTRLGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYCPSSEFAANVEAAEALP 240 Query: 241 DIISLNSIVEQWTA---PYAATSDVHNEKLFDSLPENKRVSARGIEV 284 I + E T P A + E L L + + Sbjct: 241 LIAERAAPAEALTKVATPGKAKCEAVAELLNIPLERTIKSIVLATDN 287 Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats. Identities = 74/192 (38%), Positives = 104/192 (54%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +DV N K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPEVADVRNVKKGDPSPDGKGAIDICRGIEVGHVFQLGTKYSEAMGATFLDESGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE + D KGIIWP+S+APF++ L + R+A +K+YA Sbjct: 442 LMGCYGIGVTRILGAAIEQNFDDKGIIWPESIAPFEVVLCPMGYDRSDAVREAADKLYAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R + Sbjct: 502 LTAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGRRDTEATLLPA 561 Query: 432 EEVINYASHRFS 443 E + + Sbjct: 562 GEAAATVAEKVR 573 >gi|327392821|dbj|BAK10243.1| Prolyl-tRNA synthetase ProS [Pantoea ananatis AJ13355] Length = 572 Score = 243 bits (621), Expect = 4e-62, Method: Composition-based stats. Identities = 123/235 (52%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L +E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTQYLLSTQKETPSDAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR+ADR+++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRVADRHERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQESLQETYDAMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF+R+GL ++A++G IGG SHEF VLA +GE V DF E Sbjct: 181 YSQIFNRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIF-STASDFAANIE 234 Score = 179 bits (455), Expect = 7e-43, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 112/193 (58%), Gaps = 3/193 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N D P+ K RGIEVGHIF GTKYS M A+ +G DG++ + Sbjct: 380 PMAQVADLRNVVEGDLSPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKASVQGEDGRNQIM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWP ++APF+++++ + ++ E++Y Sbjct: 440 TMGCYGIGITRVVAAAIEQNHDDRGIIWPAALAPFEVAILPMNMQKSFRVKELAEELYNT 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G +V DD E+ G FA +L+G P +++G + + + ++E K R G ++ + Sbjct: 500 LRAKGVEVILDDRKERPGVMFADMELIGVPHTIVIGDRNLDNQEIEYKARRAGEKQMIKQ 559 Query: 432 EEVINYASHRFSN 444 +E++ + + + Sbjct: 560 DEIVEFLLNALNK 572 >gi|226327022|ref|ZP_03802540.1| hypothetical protein PROPEN_00883 [Proteus penneri ATCC 35198] gi|225204240|gb|EEG86594.1| hypothetical protein PROPEN_00883 [Proteus penneri ATCC 35198] Length = 571 Score = 243 bits (621), Expect = 4e-62, Method: Composition-based stats. Identities = 122/235 (51%), Positives = 167/235 (71%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAEI SH+LMLR GMI + + G+Y W+P G + L + I+REE Sbjct: 1 MRTSHYLLSTLKETPADAEIVSHQLMLRAGMIRKLASGLYDWMPTGVRVLRKIEKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G++E+S+P +Q ADLW+ESGR++ YG E+LR +DR ++ + GPTHEEV+TDI R+ Sbjct: 61 MDNAGSLEISMPVVQPADLWLESGRWEQYGPELLRFSDRGERPFVLGPTHEEVVTDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF ++ E + +Y++M+ + Sbjct: 121 EITSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHISQESLQETYDRMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL P+ A++G IGG+ SHEF VLAD+GE + D+ E Sbjct: 181 YSKIFSRIGLDFRPVLADTGSIGGNASHEFQVLADSGEDDIVF-STGSDYAANIE 234 Score = 184 bits (468), Expect = 2e-44, Method: Composition-based stats. Identities = 68/192 (35%), Positives = 116/192 (60%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N D P+ K + RGIEVGHIF GTKYS + AT + +G + V Sbjct: 380 PVAEIADIRNVVEGDQSPDGKGTLLIKRGIEVGHIFQLGTKYSEALKATVQNEEGHNQIV 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYAR 371 MG YGIG R+VAA IE +HD +GIIWPD++APF+++++ + H ++ +++Y Sbjct: 440 TMGCYGIGITRIVAAAIEQNHDARGIIWPDAIAPFQVAILPMNMHRSYRVKEVADRLYNE 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV +DD E+ G FA +L+G P +++G + + ++++E K R + + +++ Sbjct: 500 LRAQGIDVLFDDRKERPGVMFADMELIGIPHTIVIGDRNLDNNQIEYKARRSDDKSLVNV 559 Query: 432 EEVINYASHRFS 443 ++V+ + + + Sbjct: 560 DDVVAFIKEQLA 571 >gi|51245016|ref|YP_064900.1| prolyl-tRNA synthetase [Desulfotalea psychrophila LSv54] gi|81826866|sp|Q6AP31|SYP_DESPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|50876053|emb|CAG35893.1| probable prolyl-tRNA synthetase [Desulfotalea psychrophila LSv54] Length = 570 Score = 243 bits (621), Expect = 4e-62, Method: Composition-based stats. Identities = 132/289 (45%), Positives = 186/289 (64%), Gaps = 5/289 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F+P +E P +AE+ASH+LMLR G + + S G+YS+LP G A+ V I+REE Sbjct: 1 MRYSQSFIPTKKETPAEAEVASHQLMLRAGFMRKLSSGVYSYLPYGLAAIRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA EM +P +Q ADLW E+GRY+ YG E+LR DRN++ GPTHEEV+TDI R+ Sbjct: 61 MNRAGAQEMLMPMVQPADLWKETGRYEKYGPELLRFFDRNNRESCLGPTHEEVITDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR+LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ E + SY+KMF + Sbjct: 121 ELSSYRDLPINLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFDVDDEQANLSYDKMFEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GL+ P++A+SG IGG SHEF+VLA TGE + KD ++ E + Sbjct: 181 YKRIFTRCGLQFRPVQADSGAIGGSHSHEFMVLAKTGEDTIVVCKDC-EYAANMEKAEVK 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY 289 + + N + ++ +++ + +++ + + +F Sbjct: 240 LVATEN----DEALAELEKIETPGKRKVNAVCDFLQITPQQLVKTMVFE 284 Score = 166 bits (419), Expect = 8e-39, Method: Composition-based stats. Identities = 71/202 (35%), Positives = 106/202 (52%), Gaps = 2/202 (0%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLP 297 + L ++ + +A +D+ D P + GIEVGH+F GT YS Sbjct: 360 EKNFHLKNVNIERDCTVSAVADLRQISTDDPCPRCGGRLELTEGIEVGHVFKLGTGYSES 419 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 M+A F+ G + MG YGIG RVVAA IE +HD GII+P +AP+ ++++N+ Sbjct: 420 MNARFQDGTGDEKPFVMGCYGIGVSRVVAAAIEQNHDKDGIIFPVPLAPYTVTVLNLGLK 479 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D A EK+YA L G V DD E+ G++F ADLLG P ++ VG + VE Sbjct: 480 DPEITAAAEKLYAELQAAGLSVLLDDRDERPGAKFKDADLLGIPYRLTVGKGLAKNGMVE 539 Query: 418 IKHRLTGIREDMSLEEVINYAS 439 ++ R G E+M+ E ++ + Sbjct: 540 VRRRRDGHTEEMTPEVAADFLA 561 >gi|317490123|ref|ZP_07948612.1| prolyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA] gi|325833438|ref|ZP_08165887.1| proline--tRNA ligase [Eggerthella sp. HGA1] gi|316910828|gb|EFV32448.1| prolyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA] gi|325485362|gb|EGC87831.1| proline--tRNA ligase [Eggerthella sp. HGA1] Length = 584 Score = 243 bits (621), Expect = 4e-62, Method: Composition-based stats. Identities = 109/234 (46%), Positives = 161/234 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ + P L+E+P DAEIASH+L+LR G I + + G+Y++LPLG++ L V I+REE Sbjct: 7 MRMSQLYAPTLKEDPADAEIASHRLLLRAGFIRKTASGVYTFLPLGKRVLAKVENIVREE 66 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P LQ +LW ESGR++ YG E++RL DR+D+ GPTHEE++T + R+ Sbjct: 67 MDGIGAQEIMMPALQPGELWHESGRWNDYGPELMRLVDRHDREFCLGPTHEELITSLVRN 126 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP + YQIQ+KFRDE+RPRFG++RSREF+MKDAYSF E + +Y+ M + Sbjct: 127 ELRSYKELPLSLYQIQVKFRDEIRPRFGLLRSREFIMKDAYSFHADQESLQKTYDDMSEA 186 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS 234 Y RI R+G+ P+ A+ G IGG ++ EF+ LA+ GE ++ + Sbjct: 187 YGRICDRMGMDYRPVEADPGQIGGSVTCEFMALAEAGEAELVHCTCGYAANTEA 240 Score = 159 bits (403), Expect = 7e-37, Method: Composition-based stats. Identities = 74/184 (40%), Positives = 107/184 (58%), Gaps = 2/184 (1%) Query: 258 ATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ + DS P RGIEV +F G KYS M ATF DG + MG Sbjct: 380 EWADLCIVQPGDSCPSCGLPLDGARGIEVSQVFQLGDKYSKAMGATFMAEDGSEQPFLMG 439 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YG+G R +AA++E +D GI+WP +VAP + +I + D + A EK+ + L+K+ Sbjct: 440 CYGVGISRTMAAIVEQHNDENGIMWPLTVAPAHVCVIPLTVGDDEVQPAAEKLASDLAKL 499 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G +FA ADL+G+PLQVIVG + +++ KVEIK R TG R D+ L + Sbjct: 500 GLEVVIDDRKERAGVKFADADLIGWPLQVIVGKRGLAEQKVEIKRRSTGARRDIPLAALT 559 Query: 436 NYAS 439 + + Sbjct: 560 DALA 563 >gi|307564422|ref|ZP_07626963.1| threonine--tRNA ligase [Prevotella amnii CRIS 21A-A] gi|307346782|gb|EFN92078.1| threonine--tRNA ligase [Prevotella amnii CRIS 21A-A] Length = 650 Score = 243 bits (621), Expect = 4e-62, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 150/445 (33%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y L + + RD ++ L + KG+ WLP G + + ++R+ Sbjct: 232 EYLLMLEEAKKRDHRKIGKEMELFM-FSDRVGKGLPIWLPKGTQLRLRLQDMLRKLLKPY 290 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + S +L++ SG Y YGK+ + D+ + P + +++ Sbjct: 291 NYQEVITPGIGSKNLYITSGHYAHYGKDAFQPIQTPEEDEEYMLKPMNCPHHCEVYAYKP 350 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + FR E G+ R R F DA+ F P+ K + Sbjct: 351 RSYKDLPLRIAEFGTVFRYEKSGELHGLTRVRNFTQDDAHIFVR-PDQVKAEFENNIDII 409 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L++F G ++ + D + + D + Sbjct: 410 LKVFKTFGFENYEAQISLR--------------DPEDKDKYIGDDEVWNESEQAIKQACK 455 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + VE A Y D + D++ ++ ++ F Sbjct: 456 EKGLKATVELGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLPQRF--------HL 504 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D + G++ AV+ G +W + I + Sbjct: 505 EYTAEDNTKKTPVMIHRAPFGSLERFTAVLIEHTAGHFPLW------LTPDQVAILPVSE 558 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D K+ +L DD E++G + +L P V+VG K ++ V ++ Sbjct: 559 KYNDYARKVKQQLDASDVRALIDDRNEKVGRKIRDNELKRIPYMVVVGEKEAAEGLVAMR 618 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M ++ I + Sbjct: 619 KQGGGEQSTMPVKAFIERVKAEVAE 643 >gi|291616370|ref|YP_003519112.1| ProS [Pantoea ananatis LMG 20103] gi|291151400|gb|ADD75984.1| ProS [Pantoea ananatis LMG 20103] Length = 572 Score = 243 bits (621), Expect = 4e-62, Method: Composition-based stats. Identities = 123/235 (52%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L +E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTTQYLLSTQKETPSDAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR+ADR+++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRVADRHERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQESLQETYDAMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF+R+GL ++A++G IGG SHEF VLA +GE V DF E Sbjct: 181 YSQIFNRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIF-STASDFAANIE 234 Score = 179 bits (455), Expect = 7e-43, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 112/193 (58%), Gaps = 3/193 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N D P+ K RGIEVGHIF GTKYS M A+ +G DG++ + Sbjct: 380 PMAQVADLRNVVEGDLSPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKASVQGEDGRNQIM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWP ++APF+++++ + ++ E++Y Sbjct: 440 TMGCYGIGITRVVAAAIEQNHDDRGIIWPAALAPFEVAILPMNMQKSFRVKELAEELYNT 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G +V DD E+ G FA +L+G P +++G + + + ++E K R G ++ + Sbjct: 500 LRAKGVEVILDDRKERPGVMFADMELIGVPHTIVIGDRNLDNQEIEYKARRAGEKQMIKQ 559 Query: 432 EEVINYASHRFSN 444 +E++ + + + Sbjct: 560 DEIVEFLLNALNK 572 >gi|116333673|ref|YP_795200.1| threonyl-tRNA synthetase [Lactobacillus brevis ATCC 367] gi|122269640|sp|Q03RK3|SYT_LACBA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|116099020|gb|ABJ64169.1| Threonyl-tRNA synthetase [Lactobacillus brevis ATCC 367] Length = 647 Score = 243 bits (621), Expect = 4e-62, Method: Composition-based stats. Identities = 80/444 (18%), Positives = 153/444 (34%), Gaps = 38/444 (8%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + RD + ++L L + + G+ W+P G + I +++ G Sbjct: 232 LARRQEARERDHRVIGNQLDLF--FVDPKVGAGLPYWMPNGATIRRTIERYIIDKEVSNG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKS 124 + P L + DL+ +SG + Y ++M D D M P + ++ HI+S Sbjct: 290 YQHVYTPVLANLDLYKQSGHWAHYREDMFPPMDMGDGEMLELRPMNCPSHIQVYNHHIRS 349 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP ++ + R E G+ R RE + D ++F + + + ++ Sbjct: 350 YRELPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVAPEQIQDE-FKSILDLMVK 408 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ +K R D T+ + D M + DD+ Sbjct: 409 VYADFDIKDYTFRLS--------------YRDPKNTEKYFDDDEMWNNAQAMLKGAMDDL 454 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV + +L + +S ++ F ++ L + Sbjct: 455 GLPYVEAEGEAAFYGPKLDVQTKT---ALGNEETLSTIQLD----FMLPERFDLH----Y 503 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 GADG++H + + M A + + G W I ++ Sbjct: 504 VGADGEEHRPVMIHRGLVSTMERFTAYLTEIYKGAFPTWLAPKQVT-----IIPVSEEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +K+ A L V D GE++G A P ++VG +S+ V ++ Sbjct: 559 GAYADKLAAELKAADIRVNVDKRGEKMGYLIRDAQTHKIPYTLVVGEDEMSNGSVSVRKY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 MS + + ++ Sbjct: 619 GENQTTSMSSDAFVKEILADIASY 642 >gi|296160514|ref|ZP_06843330.1| prolyl-tRNA synthetase [Burkholderia sp. Ch1-1] gi|295889263|gb|EFG69065.1| prolyl-tRNA synthetase [Burkholderia sp. Ch1-1] Length = 578 Score = 243 bits (621), Expect = 4e-62, Method: Composition-based stats. Identities = 135/288 (46%), Positives = 182/288 (63%), Gaps = 5/288 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPIGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEKYGPELLRFKDRKQSDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQ+Q KFRDE+RPRFGVMR REF+MKDAYSFD +G + SY KM+ + Sbjct: 121 QIKSYRQLPVNFYQVQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDMDGLRESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD-- 238 Y+RIF RLGL + A++G IGG SHEF V+A+TGE + DF E + Sbjct: 181 YVRIFTRLGLDFRAVAADNGSIGGSGSHEFHVIAETGEDAIAYCPT-SDFAANVEAAEAL 239 Query: 239 --FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 + + +++ P A + E L L + E Sbjct: 240 PLHAERAAPAEEMKKTATPGKAKCEAVAELLNIPLERTIKSIILATEN 287 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 72/192 (37%), Positives = 108/192 (56%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K V RGIEVGH+F GTKYS M+AT GK + Sbjct: 382 PEPVVADIRNVKKGDPSPDGKGVIDICRGIEVGHVFQLGTKYSEAMNATCLDETGKPRPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 +MG YGIG R++ A IE + D +GIIWP+S+APF++ L + + R+A +K+YA Sbjct: 442 EMGCYGIGVTRILGAAIEQNFDDRGIIWPESIAPFEVVLCPMGYDRSEAVREAADKLYAT 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L + G DV DD GE+ G FA +L+G P ++++G + + D K+E + R + + Sbjct: 502 LVEAGIDVILDDRGERPGVMFADWELIGVPHRLVIGDRGLKDGKLEYQGRRDAEATLLPV 561 Query: 432 EEVINYASHRFS 443 E+ + Sbjct: 562 EDAAQTVIGKVR 573 >gi|262281159|ref|ZP_06058941.1| prolyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202] gi|262257390|gb|EEY76126.1| prolyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202] Length = 571 Score = 243 bits (621), Expect = 4e-62, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+Y+WLP+G + L V+AI+REE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGTRVLKKVDAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GA+E+ +P Q A LW ESGRY+ YG E+LR DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLRFKDRHANPFVLGPTHEEVITDMARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ + Sbjct: 121 ELKSYKQLPVNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHATQESLQETYDVMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P++A++G IGG SHEF VLA +GE + D+ E Sbjct: 181 YSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLASSGEDDIAF-STESDYAANVE 234 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 71/192 (36%), Positives = 104/192 (54%), Gaps = 3/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A D+ N D P+ K RGIEVGHIF GTKYS + G DGK Sbjct: 379 ERDAQITEVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGTKYSEALGCKVLGEDGK 438 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEK 367 V MG YGIG RVVAA IE ++D KGI+WP ++APF+I+++ + A +A E Sbjct: 439 PFTVTMGCYGIGVTRVVAAAIEQNYDDKGIMWPQAIAPFEIAIVPMNAHKSPRTLEAAES 498 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +YA L G D+ DD E+ G +F+ +L+G P ++++G K + E K R Sbjct: 499 LYAELQAQGFDILLDDRNERPGVKFSDLELMGIPHRIVIGEKGLDAGTFEYKGRRDAEAS 558 Query: 428 DMSLEEVINYAS 439 +++ EE++ + Sbjct: 559 NLTKEELLAKLA 570 >gi|89101224|ref|ZP_01174050.1| threonyl-tRNA synthetase [Bacillus sp. NRRL B-14911] gi|89084053|gb|EAR63228.1| threonyl-tRNA synthetase [Bacillus sp. NRRL B-14911] Length = 408 Score = 243 bits (621), Expect = 4e-62, Method: Composition-based stats. Identities = 80/434 (18%), Positives = 165/434 (38%), Gaps = 32/434 (7%) Query: 9 PILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 +L+E RD +L L + +G+ WLP G V I +++ R G Sbjct: 1 RLLEEAKERDHRKIGKELDLFMT-SQKVGQGLPMWLPKGATIRRIVERYIVDKEQRLGYE 59 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 + P + + +L+ SG +D Y ++M + + +++ ++ P + I+++ I SYR Sbjct: 60 HVYTPVMANVELYKTSGHWDHYQEDMFPVMEMDNEELVLRPMNCPHHMMIYKNSIHSYRE 119 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 LP ++ R E+ ++ + + + P+ K + ++ L ++ Sbjct: 120 LPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKEEFKRVVHLILEVYKD 179 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIISLN 246 ++ R D +T+ + + D M S D++ Sbjct: 180 FNIEDYSFRLS--------------YRDPQDTEKYFNDDEMWEKAQSMLKEAMDELGLDY 225 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y DV + +L + + +S ++ F ++ ++ G D Sbjct: 226 YEAEGEAAFYGPKLDVM---VKTALGKEETLSTAQLD----FLLPERFD----LSYVGED 274 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 GK H + G + + + + +P +AP ++ +I + D + Sbjct: 275 GKQHRPVVIHR--GVVSTMERFVAFLIEEYKGAFPTWLAPVQVQVIPVSP--DAHFDYAK 330 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+ L G V D E+IG + A + P +++G K VSD+ V ++ Sbjct: 331 KVQEELQAQGYRVELDARNEKIGYKIREAQMQKIPYMLVLGDKEVSDNAVNVRKYGEQKS 390 Query: 427 EDMSLEEVINYASH 440 E MS + + Sbjct: 391 ETMSFDVFKDALKE 404 >gi|332526531|ref|ZP_08402643.1| prolyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2] gi|332110799|gb|EGJ10976.1| prolyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2] Length = 582 Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats. Identities = 120/235 (51%), Positives = 161/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G + + V AIIREE Sbjct: 1 MKASQTFISTLKEAPADAEIVSHKLMMRAGMIKRLGAGIYNYMPMGLRVIRKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW+E+GR+ +YG E+LR+ DR+D+ + PT EEV+TDI R Sbjct: 61 MNRAGAVELLMPVVQPAELWMETGRFQAYGPELLRVKDRHDRDFVIQPTSEEVITDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP TFY +Q KFRDE RPRFGVMR REF MKDAYSFD + SY+ M+ + Sbjct: 121 ELRSYKQLPRTFYHVQTKFRDERRPRFGVMRGREFTMKDAYSFDRDKASALKSYDTMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL + A++G IGGD SHEF V+ADTGE + D+ E Sbjct: 181 YCAIFDRFGLTYRAVAADTGAIGGDASHEFQVIADTGEDAIVYCPT-SDYAANIE 234 Score = 167 bits (422), Expect = 5e-39, Method: Composition-based stats. Identities = 70/189 (37%), Positives = 107/189 (56%), Gaps = 4/189 (2%) Query: 259 TSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTK-YSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + V RGIEVGH+FY GTK YS PM AT+ +GK +MG Sbjct: 393 VADIRNVVAGDPSPDGQGVLAIQRGIEVGHVFYLGTKKYSEPMGATYLDENGKPQPFEMG 452 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSK 374 YGIG R++ A IE +HD +GIIWPD++APF +++ I + A ++++ L+ Sbjct: 453 CYGIGVTRILGAAIEQNHDERGIIWPDAIAPFTVAVCPIGYDRSADVKAAADQLHDELAA 512 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +G DV DD GE+ G+ FA +L+G P +V+V + + VE++ R + L E Sbjct: 513 LGIDVVLDDRGERPGAMFADWELIGVPHRVVVSDRGLKAGTVEVQGRRETAAHTVPLAEA 572 Query: 435 INYASHRFS 443 + + R Sbjct: 573 VAFVKGRLK 581 >gi|91785266|ref|YP_560472.1| prolyl-tRNA synthetase [Burkholderia xenovorans LB400] gi|123358448|sp|Q13U19|SYP_BURXL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|91689220|gb|ABE32420.1| Prolyl-tRNA synthetase [Burkholderia xenovorans LB400] Length = 578 Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats. Identities = 135/288 (46%), Positives = 182/288 (63%), Gaps = 5/288 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPIGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEKYGPELLRFKDRKQSDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQ+Q KFRDE+RPRFGVMR REF+MKDAYSFD +G + SY KM+ + Sbjct: 121 QIKSYRQLPVNFYQVQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDMDGLRESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD-- 238 Y+RIF RLGL + A++G IGG SHEF V+A+TGE + DF E + Sbjct: 181 YVRIFTRLGLDFRAVAADNGSIGGSGSHEFHVIAETGEDAIAYCPT-SDFAANVEAAEAL 239 Query: 239 --FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 + + +++ P A + E L L + E Sbjct: 240 PLHAERAAPAEEMKKTATPGKAKCEAVAELLNIPLERTIKSIILATEN 287 Score = 175 bits (443), Expect = 2e-41, Method: Composition-based stats. Identities = 72/192 (37%), Positives = 108/192 (56%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K V RGIEVGH+F GTKYS M+AT GK + Sbjct: 382 PEPVVADIRNVKKGDPSPDGKGVIDICRGIEVGHVFQLGTKYSEAMNATCLDETGKPRPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 +MG YGIG R++ A IE + D +GIIWP+S+APF++ L + + R+A +K+YA Sbjct: 442 EMGCYGIGVTRILGAAIEQNFDDRGIIWPESIAPFEVVLCPMGYDRSEAVREAADKLYAT 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L + G DV DD GE+ G FA +L+G P ++++G + + D K+E + R + + Sbjct: 502 LLEAGIDVILDDRGERPGVMFADWELIGVPHRLVIGDRGLKDGKLEYQGRRDAEATLLPV 561 Query: 432 EEVINYASHRFS 443 E+ + Sbjct: 562 EDAAQTVIAKVR 573 >gi|91774775|ref|YP_544531.1| prolyl-tRNA synthetase [Methylobacillus flagellatus KT] gi|123254834|sp|Q1H497|SYP_METFK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|91708762|gb|ABE48690.1| prolyl-tRNA synthetase [Methylobacillus flagellatus KT] Length = 573 Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats. Identities = 123/235 (52%), Positives = 169/235 (71%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FL +E P++AE+ASHKLMLR G+I + G+YSW+PLG + L V I+REE Sbjct: 1 MRASQFFLATQKEAPQEAELASHKLMLRAGLIKRLGSGLYSWMPLGLRVLRKVETIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q +LW E+GR+ +G +ML++ DR+++ +GPTHEEV+TDI R Sbjct: 61 MNRAGALELLMPAVQPKELWEETGRWAVFGPQMLKIRDRHERDFCFGPTHEEVITDIARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKD YSF + E + +Y+ M+ + Sbjct: 121 EIRSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFVMKDGYSFHTSLESLQQTYDTMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF+RLGLK +RA++G IGGD SHEF VLAD+GE + + DF E Sbjct: 181 YSNIFNRLGLKFRAVRADTGAIGGDGSHEFHVLADSGEDALAYCEH-SDFAANVE 234 Score = 170 bits (431), Expect = 4e-40, Method: Composition-based stats. Identities = 64/187 (34%), Positives = 105/187 (56%), Gaps = 3/187 (1%) Query: 259 TSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGHIF TKY+ M AT+ +G+ +++MG Sbjct: 387 VADIRNVVEGDPSPDGKGCISLCRGIEVGHIFQLRTKYTEAMEATYLDENGQKQFMEMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+V A IE +D +GII+P ++APF +++ I + + A +Y LS + Sbjct: 447 YGIGVSRIVGAAIEQGNDERGIIFPAAMAPFSVAIAPIGYDKSEAVQSAAHALYDELSAL 506 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD GE+ G FA +L+G P ++++G + + + +VE + R E ++L +++ Sbjct: 507 GIDVLLDDRGERPGVMFADLELIGIPHRIVIGDRGLKEGQVEYQARTAASAETVALADIV 566 Query: 436 NYASHRF 442 + Sbjct: 567 SIVRQAL 573 >gi|304439592|ref|ZP_07399496.1| threonine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371904|gb|EFM25506.1| threonine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 647 Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats. Identities = 79/444 (17%), Positives = 143/444 (32%), Gaps = 41/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L T + G +LP G + + R Sbjct: 240 EYIERMEEAEKRDHRRIGRELDLFT--MRDEGPGFPFFLPHGMILKNTLLNWWRNVLLEN 297 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + + LW SG +D Y M + + P + ++ S Sbjct: 298 GYGEIQTPIILNEALWHRSGHWDHYKDNM-YFTKIDGEDYAVKPMNCPGSILVYEEKAHS 356 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + R EL G+ R R F DA+ + L + + Sbjct: 357 YRDLPIRLSEFGQVHRHELSGALHGLFRVRTFTQDDAHVYCLPEQVKDEVFKM-IDLAEL 415 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G K + P + E +A+ ++ Sbjct: 416 LYSTFGFKYEI-ELSTRPDDFMGTIEAWNIAEKN-----------------LKDALEERG 457 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 +I E A Y D H E R + G I + T+ Sbjct: 458 LKYTINEGDGAFYGPKIDFHLEDA----------IGRTWQCGTI-QLDFRMPENFELTYI 506 Query: 304 GADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 ADG+ V + +G++ ++ GK +W + I + Sbjct: 507 NADGEKARPVMLHRALLGSIERFMGILIEHFAGKFPLW------LAPVQVEIIPVSEKFH 560 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D E++ +L G V D E++G + A L +++G + V + I+ R Sbjct: 561 DYAEEVKNKLKTSGFRVEMDTRAEKVGYKIRQAQLRKVNYMLVIGEQEVESGLLSIRKRS 620 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 +D+ +E+ I+ + Sbjct: 621 GEEVKDVKIEDFISQMKEEVKEKK 644 >gi|257465911|ref|ZP_05630222.1| threonyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] gi|315917067|ref|ZP_07913307.1| threonine-tRNA ligase [Fusobacterium gonidiaformans ATCC 25563] gi|313690942|gb|EFS27777.1| threonine-tRNA ligase [Fusobacterium gonidiaformans ATCC 25563] Length = 637 Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats. Identities = 80/439 (18%), Positives = 161/439 (36%), Gaps = 42/439 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 FL +++E RD +L L + ++ G +LP G + + + R E + G Sbjct: 230 FLKLMEEAEKRDHRKLGKELELF--FLSEYGPGFPFFLPKGMVLRNTLIDLWRAEHEKAG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +++ P + + +LW SG + +Y + M + +D P + F+ SY Sbjct: 288 YVQIDTPIMLNRELWEISGHWFNYRENMYTSS-IDDVDFAIKPMNCPGGVLAFKYQQHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ R E G+ R R F D++ F +T E + + + Sbjct: 347 RDLPARVAELGKVHRHEFSGALHGLFRVRAFTQDDSHIF-MTEEQIESEIIGVVNLIDKF 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + +L + + P + E A+T + + + Sbjct: 406 YSKLFGFQYSIELSTRPEKSIGTDEIWEKAET-----------------ALAGALNHLGR 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D K+ D++ + ++ F ++ T+ G Sbjct: 449 EFKINEGDGAFYGPKLDF---KIKDAIGRTWQCGTIQLD----FNLPERFD----VTYIG 497 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ ++ + G +W V +++ + C Sbjct: 498 EDGEKHRPVMIHRVIYGSIERFIGILIEHYAGAFPMWLAPVQVKVLTI------NDECAP 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++ A+L G DD E IG + A+ P+QVI+G + +V ++ Sbjct: 552 YAKEVVAQLKAQGIRAELDDRSESIGYKIREANGRYKIPMQVIIGKNEIEKREVNVRRFG 611 Query: 423 TGIREDMSLEEVINYASHR 441 + +E M L+ + Sbjct: 612 SQAQESMELDAFLAMVKEE 630 >gi|238787209|ref|ZP_04631008.1| Prolyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641] gi|238724471|gb|EEQ16112.1| Prolyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641] Length = 572 Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats. Identities = 123/235 (52%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EINSYKQLPLNFFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+ L + A++G IGG SHEF VLA++GE + D+ E Sbjct: 181 YSKIFERMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVF-STGSDYAANIE 234 Score = 175 bits (443), Expect = 2e-41, Method: Composition-based stats. Identities = 74/192 (38%), Positives = 112/192 (58%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K RGIEVGHIF G+KYS M AT +G DG++ + Sbjct: 380 PLPQVADLRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGSKYSEAMKATVQGEDGRNQVM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYAR 371 MG YGIG RVVAA IE +HD +GIIWPD++APF+++++ + H ++ E++YA Sbjct: 440 TMGCYGIGVSRVVAAAIEQNHDDRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYAT 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD E+ G FA +L+G P +++G + + +VE K+R G ++ + Sbjct: 500 LRSHGIDVILDDRKERPGVMFADMELIGVPHNIVIGDRNLDSEEVEYKNRRAGEKQMIKT 559 Query: 432 EEVINYASHRFS 443 E+I + + Sbjct: 560 NEIIEFLLSQIK 571 >gi|260494526|ref|ZP_05814656.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_33] gi|260197688|gb|EEW95205.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_33] Length = 637 Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats. Identities = 81/443 (18%), Positives = 166/443 (37%), Gaps = 41/443 (9%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + K+ + + RD +L L + ++ G +LP G + + + R+E Sbjct: 226 KLKKHLKLVEEAEKRDHRKLGKELELF--FLSEYGPGFPFFLPKGMIVRNVLVDLWRKEH 283 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G +++ P + + +LW SG + +Y + M ++ ++ P + F+ Sbjct: 284 EKAGYLQLETPIMLNKELWEISGHWFNYRENMYT-SEIDEVEFAIKPMNCPGGVLAFKHQ 342 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP ++ R E G+MR R F D++ F +TP+ + + Sbjct: 343 LHSYKDLPARLAELGKVHRHEFSGALHGLMRVRSFTQDDSHIF-MTPDQVQDEIIGVVNL 401 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + + +L + + P S E D + D Sbjct: 402 IDKFYSKLFGFEYEIELSTKPEKAIGSQE-----------------IWDMAESALAGALD 444 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I A Y D K+ D++ + ++ F ++ Sbjct: 445 KLGRKYKINPGDGAFYGPKLDF---KIKDAIGRMWQCGTIQLD----FNLPERFD----V 493 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 T+ G DG+ H + G++ ++ + G +W V +++ + Sbjct: 494 TYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFPMWLAPVQVKVMTI------ND 547 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEI 418 C ++I A+L ++G DD E IG + A+ P+Q+I+G V + +V I Sbjct: 548 ECVPYAKEIMAKLDELGIRAELDDRTETIGYKIREANGRYRIPMQLIIGKNEVENKEVNI 607 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + + SL+E NY Sbjct: 608 RRFGSKDQFSKSLDEFYNYVVDE 630 >gi|294677983|ref|YP_003578598.1| threonyl-tRNA synthetase [Rhodobacter capsulatus SB 1003] gi|294476803|gb|ADE86191.1| threonyl-tRNA synthetase [Rhodobacter capsulatus SB 1003] Length = 648 Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats. Identities = 81/445 (18%), Positives = 146/445 (32%), Gaps = 45/445 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + +L+E RD ++ L + + + G W P G + +R Q Sbjct: 234 KAHMTMLEEAAKRDHRKLGREMDLF--HMQEEAPGQVFWHPNGWTIYTTLQDYMRRRQRA 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G +E++ P + + LW SG +++Y + M + R P + IF Sbjct: 292 DGYVEVNTPQVVNRKLWEASGHWENYRENMFIVEVDEEGAREKVINALKPMNCPCHVQIF 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F DA+ F + + + K Sbjct: 352 NVGLKSYRDLPLRMAEFGSCARYEPSGALHGIMRVRGFTQDDAHIFCM-EDQIEAETKKF 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 ++ LG ++ + P + E D + Sbjct: 411 IEFLSAVYADLGFDKWRIKLSTRPEKRIGTEE-----------------SWDHAEAALAN 453 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I E A Y + L D++ + + ++ Sbjct: 454 AVTAAGHEYEIFEGEGAFYGPKLEF---VLTDAIGRDWQCGTLQVDPNLP--------ER 502 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + A + G DG H + +G+ ++ SH GK +W S+ Sbjct: 503 LDANYIGPDGAKHRPVMLHRACLGSFERFIGILIESHAGKLPLWLAPRQVVVASIT---- 558 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D E++ A L G D E+I + L P +G+K V V Sbjct: 559 --SEADDYVEEVAATLIAAGIRAECDTRNEKINYKVREHSLGKVPYIFAIGAKEVETRTV 616 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ E ++L+ ++ Sbjct: 617 SVRRLGDTRTETVALDAIVAALKAE 641 >gi|303228556|ref|ZP_07315384.1| proline--tRNA ligase [Veillonella atypica ACS-134-V-Col7a] gi|302516803|gb|EFL58717.1| proline--tRNA ligase [Veillonella atypica ACS-134-V-Col7a] Length = 572 Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats. Identities = 122/290 (42%), Positives = 177/290 (61%), Gaps = 4/290 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK + P L+E P DA++ S +LMLR G + + + G+YS+LPLG +++ + AIIREE Sbjct: 1 MLASKLYAPTLREVPSDADVVSQQLMLRAGFMRKVANGLYSFLPLGWRSIKKIEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ +P LQ A++W ESGR+++YG EM+R+ DR+D GPTHEE++T + ++ Sbjct: 61 MDRSGAQEIMMPILQPAEIWKESGRWNAYGAEMMRINDRHDVEYCLGPTHEEMITTLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP YQIQ KFRDE RPR+G+MRSREF+MKD YSFD+ + SY M+ + Sbjct: 121 EINSYRQLPVNLYQIQSKFRDERRPRYGLMRSREFIMKDGYSFDIDDAAADVSYKNMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GL P+ A+SG IGG +HEF+ +A+ GE + D+ E Sbjct: 181 YSRIFTRCGLTFRPVEADSGAIGGSNTHEFMAIAEAGEADI-IHCSACDYAANIEIGKPG 239 Query: 241 DIISLNSIVEQWTA---PYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 + +++ P+A+T + E L L + + IE I Sbjct: 240 IMKQAEEALKELEVVDTPHASTIEAVAEMLNLPLEKTIKAVVYAIEDKVI 289 Score = 166 bits (421), Expect = 6e-39, Method: Composition-based stats. Identities = 67/177 (37%), Positives = 98/177 (55%), Gaps = 2/177 (1%) Query: 269 DSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D PE ++GIEVG +F GTKYS + AT+ +G+ + + MG YGIG R +A Sbjct: 394 DVCPECHSPLEYSKGIEVGQVFKLGTKYSESLQATYLDQNGRPNAMVMGCYGIGVSRTLA 453 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A IE HD GIIWP ++APF++ ++ I A D+ IY L DV DD + Sbjct: 454 AAIEQYHDENGIIWPRAIAPFEVVIVPINAKDEALMSTSTSIYDTLLNNKVDVLLDDRKD 513 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 + G +F ADL+G+PL++ V + ++VEI+ R TG + ++EV N S Sbjct: 514 RAGVKFKDADLIGYPLRITVSKNTLESNEVEIRVRKTGEAINCPIDEVSNKVQELLS 570 >gi|261867437|ref|YP_003255359.1| prolyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412769|gb|ACX82140.1| prolyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 571 Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats. Identities = 122/243 (50%), Positives = 162/243 (66%), Gaps = 1/243 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P +A + SH+LMLR GMI + G+Y+WLP G + L V IIR+E Sbjct: 1 MRTSKYLLSTLKETPAEAAVVSHQLMLRAGMIRPLASGLYNWLPTGLRVLKKVENIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GAIE+ +P +Q A+LW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKSGAIEVEMPVVQPAELWQESGRWEQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP YQIQ KFRDE+RPRFGVMR REFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 EVSSYRQLPLNLYQIQTKFRDEVRPRFGVMRGREFLMKDAYSFHTSKESLQETYDVMYQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA++GE V D+ E + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLANSGEDDVIF-STESDYAANIELAEAV 239 Query: 241 DII 243 + Sbjct: 240 AVG 242 Score = 179 bits (454), Expect = 9e-43, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 113/207 (54%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D +I + +D+ N D P+ K + RGIEVGHIF G KYS M Sbjct: 364 DGKHYFNINWERDVALPKIADIRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGDKYSQTM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 +AT +G DG+ V MG YGIG RVVAA IE HD + I D++APF ++++ + Sbjct: 424 NATVQGEDGRPMVVTMGCYGIGVTRVVAAAIEQHHDERGIIWPSDAIAPFSVAIVPMNMY 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + E +Y L G +V +DD E+ G FA +L+G P V++G K +++ ++ Sbjct: 484 KSESVQQFAEDLYRTLQAQGVEVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K+R TG ++ ++ +++++ + + Sbjct: 544 EYKNRRTGEKQMIAKAQLLDFLKSQIN 570 >gi|33594237|ref|NP_881881.1| prolyl-tRNA synthetase [Bordetella pertussis Tohama I] gi|81836185|sp|Q7VTZ8|SYP_BORPE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|33564312|emb|CAE43613.1| prolyl-tRNA synthetase [Bordetella pertussis Tohama I] gi|332383651|gb|AEE68498.1| prolyl-tRNA synthetase [Bordetella pertussis CS] Length = 576 Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats. Identities = 130/288 (45%), Positives = 179/288 (62%), Gaps = 5/288 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P +AEIASH+LM R GMI + + GIY+++PLG K + + I+REE Sbjct: 1 MRASKYHLNTLKEAPAEAEIASHQLMTRAGMIRKLAGGIYTYMPLGLKVIRKIEGIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q A+LW+ESGR++ YG E+LR+ DR+ + + PT EEV+TDI R+ Sbjct: 61 MNAAGAIELLMPVVQPAELWMESGRWEQYGAELLRIKDRHQRDFVLQPTSEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD G++ SY+ M+ + Sbjct: 121 EIQSYRQLPLNFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDEAGAQRSYDIMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL+ + A++G IGG SHEF V+ADTGE + + D+ E + Sbjct: 181 YQRIFQRLGLEFRAVAADTGSIGGSRSHEFQVIADTGEDLIVYN-PESDYAANIELAEAP 239 Query: 241 DI----ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 + + +E P AA + + L L + ++ Sbjct: 240 ALLATRAAPGQDLEAVPTPGAAKCEDVAKLLDLPLARTIKSIVLAVDQ 287 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 66/188 (35%), Positives = 102/188 (54%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGH+F+ GTKYS + ATF +GK +QMG Sbjct: 387 VADLRNVVEGDPSPDGKGALSIQRGIEVGHVFFLGTKYSEALKATFLDDNGKPAVLQMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+V A IE +HD +GIIWP ++AP+++ + + + RD +Y L Sbjct: 447 YGIGVTRIVGAAIEQNHDARGIIWPRAIAPYEVVICPVGWGKSETVRDTALALYEALRAR 506 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD + G FA +L+G PL+V VG + +++ VE++ R + +++ + Sbjct: 507 GVDVMLDDRDSRPGVMFAEWELIGVPLRVTVGERGLNEGVVELQARREAEAAKVPVDQAL 566 Query: 436 NYASHRFS 443 + Sbjct: 567 AQTLAKLD 574 >gi|33603207|ref|NP_890767.1| prolyl-tRNA synthetase [Bordetella bronchiseptica RB50] gi|81836865|sp|Q7WFN9|SYP_BORBR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|33568838|emb|CAE34596.1| prolyl-tRNA synthetase [Bordetella bronchiseptica RB50] Length = 576 Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats. Identities = 130/288 (45%), Positives = 179/288 (62%), Gaps = 5/288 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P +AEIASH+LM R GMI + + GIY+++PLG K + + I+REE Sbjct: 1 MRASKYHLNTLKEAPAEAEIASHQLMTRAGMIRKLAGGIYTYMPLGLKVIRKIEGIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q A+LW+ESGR++ YG E+LR+ DR+ + + PT EEV+TDI R+ Sbjct: 61 MNAAGAIELLMPVVQPAELWMESGRWEQYGAELLRIKDRHQRDFVLQPTSEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD G++ SY+ M+ + Sbjct: 121 EIQSYRQLPLNFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDEAGAQRSYDIMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL+ + A++G IGG SHEF V+ADTGE + + D+ E + Sbjct: 181 YQRIFQRLGLEFRAVAADTGSIGGSRSHEFQVIADTGEDLIVYN-PESDYAANIELAEAP 239 Query: 241 DI----ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 + + +E P AA + + L L + ++ Sbjct: 240 ALLATRAAPGQDLEAVPTPGAAKCEDVAKLLDLPLARTIKSIVLAVDQ 287 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 66/188 (35%), Positives = 102/188 (54%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGH+F+ GTKYS + ATF +GK +QMG Sbjct: 387 VADLRNVVEGDPSPDGKGALSIQRGIEVGHVFFLGTKYSEALKATFLDDNGKPAVLQMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+V A IE +HD +GIIWP ++AP+++ + + + RD +Y L Sbjct: 447 YGIGVTRIVGAAIEQNHDARGIIWPRAIAPYEVVICPVGWGKSETVRDTALALYEALRAR 506 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD + G FA +L+G PL+V VG + +++ VE++ R + +++ + Sbjct: 507 GVDVMLDDRDSRPGVMFAEWELIGVPLRVTVGERGLNEGVVELQARREAEAAKVPVDQAL 566 Query: 436 NYASHRFS 443 + Sbjct: 567 AQTLAKLD 574 >gi|291515296|emb|CBK64506.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Alistipes shahii WAL 8301] Length = 604 Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats. Identities = 87/451 (19%), Positives = 158/451 (35%), Gaps = 42/451 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD L L T + +G+ WLP G D + +R Q Sbjct: 183 EYLAMMEEAKKRDHRKLGKDLELFT-FSQRVGQGLPLWLPKGAALRDRLEQFLRGVQKEY 241 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRN--DKAMIYGPTHEEVMTDIFRSHI 122 G ++ P + + +L+V SG Y YGK+ + + + P + +I+RS Sbjct: 242 GYQQVITPHIGNKELYVTSGHYAKYGKDSFQPIHTPIEGEEYLLKPMNCPHHCEIYRSKP 301 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY+ LP + +R E G+ R R F DA+ F + + + ++ Sbjct: 302 RSYKELPVRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFVRPDQLLEE-FERVIDIV 360 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L IF L + + D + + D S Sbjct: 361 LYIFKTLKFDNYTAQISLR--------------DPNNKEKYIGSDENWEKAESAIMQAAK 406 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L ++VE A Y D + D++ ++ ++ Sbjct: 407 EKGLTTVVELGEAAFYGPKLDFM---VKDAIGRKWQLGTIQVDYNLP--------ERFDL 455 Query: 301 TFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 T+KG D + + G+M AV+ GK +W + + + Sbjct: 456 TYKGADDRLHRPIMIHRAPFGSMERFVAVLLEHTGGKFPLW------LSPQQVVVLPISE 509 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D +K+ L++ DD E+IG + +L P +IVG K ++ V ++ Sbjct: 510 KFNDYAQKVSEFLNRSDVRTEVDDRNEKIGRKIRDNELKRIPYLLIVGEKEEAEGLVSVR 569 Query: 420 HRLTGIREDMSLEEVINYA----SHRFSNNR 446 + G + MSLE ++ N+ Sbjct: 570 AQGEGDKGQMSLEAFRDFIAGLVKEEIEANK 600 >gi|270157462|ref|ZP_06186119.1| prolyl-tRNA synthetase [Legionella longbeachae D-4968] gi|289164147|ref|YP_003454285.1| Prolyl-tRNA synthetase (Proline--tRNA ligase)(ProRS)(Global RNA synthesis factor) [Legionella longbeachae NSW150] gi|269989487|gb|EEZ95741.1| prolyl-tRNA synthetase [Legionella longbeachae D-4968] gi|288857320|emb|CBJ11147.1| Prolyl-tRNA synthetase (Proline--tRNA ligase)(ProRS)(Global RNA synthesis factor) [Legionella longbeachae NSW150] Length = 569 Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats. Identities = 124/235 (52%), Positives = 168/235 (71%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FL L+E P DAEI SH+LM+RTGMI + G+Y+W+PLG K L + I+REE Sbjct: 1 MRASQWFLATLKETPNDAEIVSHQLMVRTGMIRKLGSGLYTWMPLGLKVLRKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N ++E+ +P +Q A+LW E+GR+D++G ++L + D ND+ +GPTHEEV+TDI R Sbjct: 61 MNNINSMEVLMPAVQPAELWQETGRWDTFGGQLLTMKDSNDREYCFGPTHEEVITDIMRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP +FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L E + +Y M+ + Sbjct: 121 ELQSYKQLPASFYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHLNLESLQDTYKDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGLK + A++G IGG SHEF VLAD+GE +F S D+ E Sbjct: 181 YCRIFDRLGLKYRAVEADTGAIGGSASHEFQVLADSGEDLIFYSDQG-DYAANIE 234 Score = 159 bits (403), Expect = 7e-37, Method: Composition-based stats. Identities = 71/206 (34%), Positives = 110/206 (53%), Gaps = 8/206 (3%) Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSA 300 + + V+++ A D+ N K D P+ K S RGIEVGH+F G KY+ M+A Sbjct: 369 AAWDKDVKEYLAF-----DLRNVKDGDISPDGKGTLYSCRGIEVGHVFQLGDKYAKAMNA 423 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQ 359 G+ + MG YG+G RVVAA IE HD KGIIWP ++APF++ +I + AH Sbjct: 424 VVINEQGQLETMLMGCYGLGITRVVAAAIEQHHDEKGIIWPQNIAPFQLVIIPLNAHRSP 483 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + +++Y + + DV DD E+ G FA DL+G P +++V + + + VE K Sbjct: 484 EVKKQADRLYEQFKNLSIDVLIDDRNERAGVLFADHDLIGIPHRLVVSDRNIEQNCVEYK 543 Query: 420 HRLTGIREDMSLEEVINYASHRFSNN 445 R TG + +L+ ++ S + Sbjct: 544 SRATGEMQQFNLDTAVDSVLKLISKS 569 >gi|78065148|ref|YP_367917.1| prolyl-tRNA synthetase [Burkholderia sp. 383] gi|114152177|sp|Q39JU3|SYP_BURS3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|77965893|gb|ABB07273.1| Prolyl-tRNA synthetase [Burkholderia sp. 383] Length = 578 Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats. Identities = 136/288 (47%), Positives = 182/288 (63%), Gaps = 5/288 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR G IE+ +P +Q A+LW ESGR++ YG E+LR DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGGIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKDNDFVIGPTHEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD G SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDAAGLNESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y+RIF RLGL+ + A+SG IGG+ SHEF V+ADTGE + +F E + Sbjct: 181 YVRIFTRLGLEFRAVAADSGSIGGNFSHEFHVIADTGEDAIAYCPT-SEFAANIEAAEAL 239 Query: 240 ---DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 + + +E+ P A + E L L + + Sbjct: 240 PLIAERAAPAEAMEKVATPGKAKCEAVAELLAIPLERTIKSIVLATDN 287 Score = 166 bits (419), Expect = 9e-39, Method: Composition-based stats. Identities = 71/179 (39%), Positives = 101/179 (56%), Gaps = 3/179 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +DV N K D P+ K V RGIEVGH+F GTKYS M ATF GK + Sbjct: 382 PEPDVADVRNVKKGDPSPDGKGVIDICRGIEVGHVFQLGTKYSEAMGATFLDESGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YG+G R++ A IE + D KGIIWP+S+APF++ L + + R+ +K+YA Sbjct: 442 LMGCYGVGVTRILGAAIEQNFDDKGIIWPESIAPFEVVLCPMGYDRSDMVRETADKLYAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L G DV DD GE+ G FA +L+G P ++++G + + + K+E + R + Sbjct: 502 LVAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKEGKIEYQGRRDAEATLLP 560 >gi|221633051|ref|YP_002522276.1| threonyl-tRNA synthetase [Thermomicrobium roseum DSM 5159] gi|221156502|gb|ACM05629.1| threonyl-tRNA synthetase [Thermomicrobium roseum DSM 5159] Length = 596 Score = 243 bits (620), Expect = 5e-62, Method: Composition-based stats. Identities = 83/442 (18%), Positives = 152/442 (34%), Gaps = 39/442 (8%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E R D +L L + G+ WLP G K L+ + R+E + G Sbjct: 183 YLHRLEEAERRDHRRLGRELELF--HFDPTAPGMPYWLPKGLKILNLLLDFWRQEHEKRG 240 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E++ P + LW SG +D Y + M + P + ++ +SY Sbjct: 241 YQEIAAPLINDKSLWEVSGHWDHYRENMFLIQLDEHLTYGVKPMNCPNAMIVYNLKKRSY 300 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R E G++R R+F DA+ F T + + + ++ Sbjct: 301 RDLPLRLSDCDILHRYERSGTLHGLLRVRKFQQDDAHIFV-TEDQIEEEFARILEIAQLF 359 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + GL+ +R + P E A+ ++ Sbjct: 360 YGIFGLRY-TLRLGTRPADFMGDPETWDKAEAALQRILDRHAG---------------PG 403 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ E D+L + ++ F ++ T+ Sbjct: 404 NYLIGEGEGAFYGPKIDILME---DALGRQWQTGTIQLD----FQLPRRF----GCTYTD 452 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + + G++ ++ G +W V I + Sbjct: 453 RDGTEKTPVVIHRVIYGSLERFIGILIEHFAGAFPVWLAPVQATIIPIA------DRHLP 506 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ RL G V DD E++ ++ A L P ++VG + V++ + ++ R Sbjct: 507 YAYRVRDRLRDAGLRVEVDDGDERMQAKIRSAQLQKIPYMLVVGDREVNEESLAVRLRTN 566 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS+E I + Sbjct: 567 ENIGSMSIERFITMVQRLVAEK 588 >gi|94498868|ref|ZP_01305406.1| prolyl-tRNA synthetase [Oceanobacter sp. RED65] gi|94428500|gb|EAT13472.1| prolyl-tRNA synthetase [Oceanobacter sp. RED65] Length = 584 Score = 243 bits (620), Expect = 5e-62, Method: Composition-based stats. Identities = 118/223 (52%), Positives = 159/223 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y + L+E+P DA + SH+LMLR GMI + + G+Y+WLPLG K L V ++REE Sbjct: 1 MRASQYLVATLKESPSDAVVVSHQLMLRAGMIRKLASGLYTWLPLGLKTLRKVEKVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P +Q A+LW ESGR+ YG E+LRL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MDAAGAQEVLMPAVQPAELWEESGRWFEYGGELLRLKDRHNRDFCVGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE RPRFGVMRSREF+MKDAYSF + + + +Y++M + Sbjct: 121 ELNSYKQLPSNFYQIQTKFRDETRPRFGVMRSREFIMKDAYSFHIDGDSLQQTYDRMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC 223 Y IF RLGL P+ A++G IGG +SHEF VLA +GE + Sbjct: 181 YTNIFTRLGLDFRPVAADTGSIGGAVSHEFHVLAQSGEDDIAF 223 Score = 146 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 70/184 (38%), Positives = 104/184 (56%), Gaps = 5/184 (2%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A D+ N D+ P+ + RGIEVGHIF GTKYS + A +GK Sbjct: 383 ERDAHIDRIEDLRNVVEGDASPDGQGTLEIKRGIEVGHIFQLGTKYSEALGAKVLDENGK 442 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEK 367 + + MG YGIG RVVAA IE +HD +GIIWP+++APF++S++ I A + E+ Sbjct: 443 EKTMMMGCYGIGVSRVVAAAIEQNHDDRGIIWPEAIAPFQVSIVQIDAQKSEDVVKYSEE 502 Query: 368 IYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +Y L+ +G DVF DD + G +FA ++L+G P +V++ S+ + K E KHR Sbjct: 503 LYESLTALGVDVFLDDRDKKTSPGVKFADSELMGIPHRVVLSSRGLKAGKAEYKHRKDSK 562 Query: 426 REDM 429 + Sbjct: 563 DGIV 566 >gi|114319700|ref|YP_741383.1| prolyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1] gi|122312397|sp|Q0AB94|SYP_ALHEH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114226094|gb|ABI55893.1| prolyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1] Length = 568 Score = 243 bits (620), Expect = 5e-62, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 159/235 (67%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S + L +E P DAEI SH+LMLR GMI + + G+Y+W PLG + L V I+REE Sbjct: 1 MRASLFPLSTSKETPADAEIVSHQLMLRAGMIRKLAAGLYTWTPLGLRVLRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P +Q A+LW ES R+D YG E+LRL DR+++ +GPTHEEV+TD R Sbjct: 61 MDRAGAHELLMPAVQPAELWQESTRWDKYGPELLRLKDRHERDFCFGPTHEEVITDYVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE+RPRFGVMR+REFLMKDAYSF L + +Y M+ + Sbjct: 121 EVKSYRQLPLNLYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLDDDCLARTYQVMYET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R GL + A+SG IGG +SHEF VLA++GE V S D+ E Sbjct: 181 YTRIFERTGLVFRAVAADSGNIGGSVSHEFHVLAESGEDAVAFSD-ESDYAANVE 234 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 72/205 (35%), Positives = 104/205 (50%), Gaps = 3/205 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D I +D+ D P+ + ARGIEVGHIF G +YS M Sbjct: 363 DDAHYFGINWGRDVALPEVADLREVVAGDPSPDGRGTLEIARGIEVGHIFQLGREYSEKM 422 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH- 357 AT G V MG YGIG RVVAA IE +HD GIIWP +APF+++L+ I + Sbjct: 423 KATVLNEAGDAQTVTMGCYGIGVSRVVAAAIEQNHDDNGIIWPAPIAPFQLALVPIGMNR 482 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + + EK+YA L G +VF+DD + G +FA +L+G P ++++G + + + VE Sbjct: 483 SEAVTEQAEKLYAELQAEGVEVFFDDRDARPGVKFADMELIGIPHRLVIGDRGLKNGVVE 542 Query: 418 IKHRLTGIREDMSLEEVINYASHRF 442 + R D+ L E+ + R Sbjct: 543 YRGRRDSESTDVPLAELSAFLRERL 567 >gi|238897616|ref|YP_002923295.1| proline tRNA synthetase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259511602|sp|C4K3K4|SYP_HAMD5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|229465373|gb|ACQ67147.1| proline tRNA synthetase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 579 Score = 243 bits (620), Expect = 5e-62, Method: Composition-based stats. Identities = 142/413 (34%), Positives = 206/413 (49%), Gaps = 36/413 (8%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L L+E P DAEI SH+LMLR GMI + + G+Y+WLP G + L + I+REE Sbjct: 1 MRTTQYLLSTLKELPADAEIISHQLMLRAGMIRKLASGLYTWLPTGTRVLKKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q ADLW ES R++ YG E+LR ADR+++ + GPTHEEV+TD+ R+ Sbjct: 61 MNKAGAIEVVMPIVQPADLWQESERWEHYGPELLRFADRSERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFG+MR+REFLMKDAYSF T E + +Y M+ + Sbjct: 121 EISSYKQLPLNFFQIQTKFRDEIRPRFGIMRAREFLMKDAYSFHNTLESLQETYQTMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN---- 236 Y +IF R+ L ++A++G IGG SHEF VLAD+GE ++ DF E Sbjct: 181 YTKIFERMQLNFRAVQADTGSIGGSRSHEFQVLADSGEDEIVF-STVSDFAANIELAEAL 239 Query: 237 ---------------TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARG 281 D + +++ +VEQ++ P T K ++ Sbjct: 240 VPHEKRASPCETLRIIDTPNAKTIDQLVEQFSIPIEKTLKTLIVYAHKDSGH-KLLALLV 298 Query: 282 IEVGHIFYFGTKYSLP--MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 I + S TF + ++ G +G + + +I Sbjct: 299 RGDHLINKVKAEKSPQVAKPLTFASEEDIRAHIGAGPGSLGPLHLKMPIIADRAVAVMSD 358 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYA-------------RLSKVGCDV 379 + I + E + L K G +V Sbjct: 359 FSAGSNKEDQHYFGINWERDLPLPIIEDLRNVVEGDPSPDGKGTLLIKRGIEV 411 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 115/196 (58%), Gaps = 5/196 (2%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P D+ N D P+ K + RGIEVGHIF GTKYS M A +G +G+ + Sbjct: 380 PLPIIEDLRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSQAMGAKVQGENGRQQMM 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R+VAA IE HD GI+WP+++APF+++++ I R E++YA Sbjct: 440 IMGCYGIGVSRLVAAAIEQHHDQHGILWPEAIAPFQVAILPIHLKKSDAVRQEAERLYAE 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR--LTGIREDM 429 LS +G DV +DD E+ G FA +L+G P +I+G + + ++++E ++R ++ + Sbjct: 500 LSSLGMDVIFDDRQERPGVMFADMELIGIPHTLIIGDRDLENNELEYRYRGIDDHKKQQL 559 Query: 430 SLEEVINYASHRFSNN 445 + +V+++ + +++ Sbjct: 560 KISDVVSFLLEKINSH 575 >gi|227327749|ref|ZP_03831773.1| prolyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 572 Score = 243 bits (620), Expect = 5e-62, Method: Composition-based stats. Identities = 124/235 (52%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYMLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLWVESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWVESGRWDQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 EVSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQVTYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+ L ++A++G IGG+ SHEF VLA +GE + D+ E Sbjct: 181 YSKIFSRMDLDFRAVQADTGSIGGNASHEFQVLATSGEDDIVF-STESDYAANIE 234 Score = 176 bits (447), Expect = 6e-42, Method: Composition-based stats. Identities = 70/187 (37%), Positives = 109/187 (58%), Gaps = 3/187 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGHIF G+KYS + AT +G DG++ + MG Sbjct: 384 VADIRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGSKYSEALKATVQGEDGRNQTLTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKV 375 YGIG RVVAA IE +HD +GIIWPD++APF ++++ + H ++ E IY +L Sbjct: 444 YGIGVTRVVAAAIEQNHDERGIIWPDAIAPFHVAILPMNMHKSFRVKEVAEDIYQQLRAK 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + ++E K+R G ++ + E+I Sbjct: 504 GIEVLLDDRKERPGVMFADMELIGVPHTIVIGDRNLDSEEIEYKNRRGGEKQMIKTSEII 563 Query: 436 NYASHRF 442 ++ Sbjct: 564 DFLLANI 570 >gi|332289599|ref|YP_004420451.1| prolyl-tRNA synthetase [Gallibacterium anatis UMN179] gi|330432495|gb|AEC17554.1| prolyl-tRNA synthetase [Gallibacterium anatis UMN179] Length = 568 Score = 243 bits (620), Expect = 5e-62, Method: Composition-based stats. Identities = 125/252 (49%), Positives = 167/252 (66%), Gaps = 1/252 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPTDAEVVSHQLMLRAGMIRKLAAGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GAIE+ +P +Q ADLW ES R++ YG E+LR DR D+ + GPTHEEV+TD+ R Sbjct: 61 MNKSGAIEVVMPVVQPADLWQESQRWEQYGPELLRFTDRGDRPFVLGPTHEEVITDLARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKD YSF L E + +Y+ M + Sbjct: 121 ELSSYKQLPINLYQIQTKFRDEVRPRFGVMRSREFIMKDGYSFHLDKESLQQTYDVMHQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF+RLGL P++A++G IGG SHEF VLAD+GE + D+ E + Sbjct: 181 YCNIFNRLGLDFRPVQADNGSIGGSGSHEFQVLADSGEDDIVF-STESDYAANIEMAEAV 239 Query: 241 DIISLNSIVEQW 252 + + E+ Sbjct: 240 ALGERQAATEEL 251 Score = 181 bits (460), Expect = 2e-43, Method: Composition-based stats. Identities = 69/192 (35%), Positives = 108/192 (56%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D + + RGIEVGHIF G KYS M AT +G DGK + Sbjct: 377 PTPQIADIRNVVEGDPSPCGKGTLLIKRGIEVGHIFQLGKKYSEAMKATVQGEDGKPQTM 436 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYAR 371 MG YGIG RVVAA IE SHD +GIIW D++APF+++++ + + E++Y Sbjct: 437 MMGCYGIGITRVVAAAIEQSHDERGIIWSDALAPFQVAIVPMNMHKSAAVQQYAEELYQT 496 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G +V +DD E+ G FA +L+G P +I+G K + ++E K R +G ++ + Sbjct: 497 LLAQGIEVLFDDRKERPGVMFADMELIGIPHMIIIGEKNLEKGEIEYKSRRSGEKQMVDK 556 Query: 432 EEVINYASHRFS 443 ++++ + + + Sbjct: 557 QQLVKFITEKLK 568 >gi|330815470|ref|YP_004359175.1| Prolyl-tRNA synthetase [Burkholderia gladioli BSR3] gi|327367863|gb|AEA59219.1| Prolyl-tRNA synthetase [Burkholderia gladioli BSR3] Length = 578 Score = 243 bits (620), Expect = 5e-62, Method: Composition-based stats. Identities = 129/235 (54%), Positives = 170/235 (72%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR+ DR D + GPTHEEV+TDI R+ Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRIKDRKDNDFVIGPTHEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD G K SY KM+ + Sbjct: 121 QIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDQAGLKESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y+R+F R+GL+ + A++G IGG SHEF V+ADTGE + +F E Sbjct: 181 YVRVFTRIGLEFRAVAADNGSIGGSGSHEFHVIADTGEDAIAYC-PSSEFAANVE 234 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 107/196 (54%), Gaps = 7/196 (3%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N + D P+ K V RGIEVGH+F GTKYS M +TF GK + Sbjct: 382 PEPEVADLRNVQKGDPSPDGKGVLDICRGIEVGHVFQLGTKYSKAMGSTFLDEGGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 +MG YGIG R++ A IE + D KGIIWP+S+APF++ L + + R+A ++++A Sbjct: 442 EMGCYGIGITRILGAAIEQNFDDKGIIWPESIAPFEVVLCPMGYDRSEAVRNAADQLHAD 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD GE+ G FA +L+G P ++++G + + D K+E + R + Sbjct: 502 LLAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGRRDTEASLLPA 561 Query: 432 E----EVINYASHRFS 443 E VI + Sbjct: 562 EGAALTVIEKVREALA 577 >gi|260062396|ref|YP_003195476.1| threonyl-tRNA synthetase [Robiginitalea biformata HTCC2501] gi|88783959|gb|EAR15130.1| threonyl-tRNA synthetase [Robiginitalea biformata HTCC2501] Length = 646 Score = 243 bits (620), Expect = 5e-62, Method: Composition-based stats. Identities = 77/444 (17%), Positives = 162/444 (36%), Gaps = 39/444 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L T H+ +G+ WLP G + + +++ Q + G Sbjct: 231 YLHMLEEAKKRDHRKLGKELELFT-FSHKVGQGLPLWLPKGAALRERLEQFLKKAQKKAG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIK 123 + P + +L+V SG Y YG++ + R D+ + P + +IF + Sbjct: 290 YEMVVTPHIGQKELYVTSGHYAKYGEDSFQPIHTPREDEEFLLKPMNCPHHCEIFNATPV 349 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP F + +R E G+ R R F DA+ F + + + + L Sbjct: 350 SYRDLPKRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTHDQLDEE-FKNVIDLSL 408 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + LG ++ + + D + + + + + Sbjct: 409 YVLGSLGFENFTAQVS--------------IRDPEKPEKYIGEVENWEKAEAAIIHAATE 454 Query: 243 ISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 L+ ++E A Y D + D+L ++ ++ T Sbjct: 455 KGLDFVIEPGEAAFYGPKLDFM---VKDALGRQWQLGTIQVDYTLP--------ERFDLT 503 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +KG+D + H + G+M A++ G +W + + + Sbjct: 504 YKGSDNELHRPVMIHRAPFGSMERFVALLLEHTGGNFPLWLTPQQAIVLPV------SEK 557 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + +K+ L D E +G + A++ +P +IVG + ++D + ++ Sbjct: 558 HENYAQKVLNSLENHEIRALLDARSETVGKKIREAEMGKYPFMIIVGDQEMTDGTISVRR 617 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 +++E + ++ Sbjct: 618 HGGEDLGSITVEALSGLVKEEINS 641 >gi|114799933|ref|YP_761871.1| threonyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444] gi|123027650|sp|Q0BXC2|SYT_HYPNA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|114740107|gb|ABI78232.1| threonyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444] Length = 657 Score = 243 bits (620), Expect = 5e-62, Method: Composition-based stats. Identities = 81/450 (18%), Positives = 152/450 (33%), Gaps = 52/450 (11%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L ++G W P G + A IR +Q+ G Sbjct: 234 LTRLEEAEKRDHRKLGAQLDLF--HFQPEAQGSVFWHPKGFMIWRELEAYIRRQQDADGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADR-------------NDKAMIYGPTHEEV 113 +E+ P L ++ W +SG + + + M + D + M P + Sbjct: 292 VEVKTPQLLNSVFWEKSGHWSKFRENMFVVPDEIPSTESDAPILSGEGELMALKPMNCPA 351 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IF++ +SYR+LP + R+E G+MR R+ DA+ F + + Sbjct: 352 HVQIFKNAQRSYRDLPIRMAEFGCCHRNEAHGALHGLMRVRQMTQDDAHIFCREDQIADE 411 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 + + + ++ GL I + + P + E D Sbjct: 412 T-LRFLKLFETVYGDFGLSEISYKLATRPEMRAGTDE-----------------TWDRAE 453 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + SI E A Y + H L D++ + F Sbjct: 454 KALADALTAAGMTFSIAEGEGAFYGPKLEFH---LTDAIGRTWQCG--------TFQLDY 502 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + A + G+DG H + G ++ ++ G +W Sbjct: 503 VLPERLDAEYTGSDGAKHRPVMLHRAVFGTFERFMGILIENYAGSFPLW------MSPVQ 556 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + + A D E+ A L K G V D E I + + P+ +VG++ Sbjct: 557 VVVAAITDAAGDYAEEAAAALRKAGLRVEVDKRNETINYKVREHSVQKVPVIAVVGAREA 616 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHR 441 D K+ ++ + ++ +SL+E + + Sbjct: 617 EDRKLALRRLGSNGQQIISLDEALVALADE 646 >gi|295687966|ref|YP_003591659.1| threonyl-tRNA synthetase [Caulobacter segnis ATCC 21756] gi|295429869|gb|ADG09041.1| threonyl-tRNA synthetase [Caulobacter segnis ATCC 21756] Length = 658 Score = 243 bits (620), Expect = 5e-62, Method: Composition-based stats. Identities = 74/437 (16%), Positives = 141/437 (32%), Gaps = 39/437 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD + L I + KG+ W P G + +R + G Sbjct: 237 YLKRIEEAEKRDHRKLGKTMDLF--HIQEEGKGMVFWHPKGWALYRVLEDYMRRRLDAAG 294 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG + +G M + + P + IF KSY Sbjct: 295 YKEVKTPQILDKSLWEKSGHAEKFGHAMFMCESAEGEVLAVKPMNCPGHIQIFNVGQKSY 354 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R E G+MR R F DA+ F + ++ S + + Sbjct: 355 RELPLRMAEFGACHRYEPSGAMHGIMRVRAFTQDDAHIFCREEQVTEES-ARFIELLRSV 413 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 ++ LG+ + + P + E D + + + Sbjct: 414 YNDLGMTLADTKFSTRPDLRAGTDE-----------------VWDKAESALSAAAEAAGE 456 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D++ + ++ F + + A + Sbjct: 457 TLVLQPGEGAFYGPKLEF---SLKDAIGRVWQCGTLQLD----FVLPER----LDAEYVS 505 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + +G+ ++ + G +W ++ D Sbjct: 506 EDGSKKRPVMLHRAILGSFERFIGILLENFAGALPVWLAPTQVVVATIT------SDADD 559 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L+K+G D E+I + L P+ +VG K ++ ++ Sbjct: 560 YAREVVETLTKLGMRAELDLRNEKINYKIREHSLAKVPVIAVVGRKEAETRQLALRRLGG 619 Query: 424 GIREDMSLEEVINYASH 440 + +SLEE I+ + Sbjct: 620 EGQSILSLEEAISVLTS 636 >gi|293611014|ref|ZP_06693313.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826666|gb|EFF85032.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 571 Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+Y+WLP+G + L V+AI+REE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGTRVLKKVDAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GA+E+ +P Q A LW ESGRY+ YG E+LR DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLRFKDRHTNPFVLGPTHEEVITDMARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ + Sbjct: 121 ELKSYKQLPVNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHATQESLQETYDVMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P++A++G IGG SHEF VLA +GE + D+ E Sbjct: 181 YSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLAASGEDDIAF-STESDYAANVE 234 Score = 166 bits (421), Expect = 6e-39, Method: Composition-based stats. Identities = 73/192 (38%), Positives = 105/192 (54%), Gaps = 3/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A + D+ N D P+ K RGIEVGHIF GTKYS + G DGK Sbjct: 379 ERDAQISEIFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGTKYSEALGCKVLGEDGK 438 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEK 367 V MG YGIG RVVAA IE ++D KGIIWP ++APF+I+++ + A +A E Sbjct: 439 PFTVTMGCYGIGVTRVVAAAIEQNYDDKGIIWPQAIAPFEIAIVPMNAHKSPRTLEAAES 498 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +YA L G DV DD E+ G +F+ +L+G P ++++G K + E K R Sbjct: 499 LYAELQAQGFDVLLDDRNERPGVKFSDLELMGIPHRIVIGEKGLDAGTFEYKGRRDAEAS 558 Query: 428 DMSLEEVINYAS 439 +++ EE++ + Sbjct: 559 NLTKEELLAKLA 570 >gi|13471046|ref|NP_102615.1| threonyl-tRNA synthetase [Mesorhizobium loti MAFF303099] gi|22654133|sp|Q98LR2|SYT_RHILO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|14021790|dbj|BAB48401.1| threonyl-tRNA synthetase [Mesorhizobium loti MAFF303099] Length = 658 Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 80/445 (17%), Positives = 148/445 (33%), Gaps = 39/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + + +L+E RD ++ L + G+ W G K N+ +R + Sbjct: 233 EAYQTMLEEAEKRDHRKLGREMDLF--HFQEEGPGVVFWHAKGWKMFQNLVNYMRRRLDE 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 291 QGYQEVNAPQVLDKSLWETSGHWGWYRDAMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F + + Sbjct: 351 KHGLKSYRDLPVKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQLASECLRIN 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L + G I ++ + P + E A+ M + + T Sbjct: 411 -DLILSTYADFGFDEISVKLSTRPDKRVGTDEAWDHAEA----------IMGSVLETIRT 459 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + I SI A Y + L D++ + ++ FG Sbjct: 460 RSGNRIK-TSINPGEGAFYGPKFEY---VLKDAIGREWQCGTTQVDFNLPERFG------ 509 Query: 298 MSATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G K V + G+M ++ ++ G +W ++ Sbjct: 510 --AFYIGSDSEKKQPVMVHRAICGSMERFLGILIENYSGHFPLWFAPQQVVVATIT---- 563 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 ++ A+L G D E+I + L P+ ++ G + + V Sbjct: 564 --SEADGYATEVVAKLKAAGLLAEADLRNEKINYKVREHSLAKVPVILVCGKREAEEQTV 621 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 I+ + +E + L E I + Sbjct: 622 NIRRLGSRDQESLGLAEAIAQLTEE 646 >gi|207721477|ref|YP_002251917.1| prolyl-trna synthetase protein [Ralstonia solanacearum MolK2] gi|206586637|emb|CAQ17223.1| prolyl-trna synthetase protein [Ralstonia solanacearum MolK2] Length = 574 Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 127/277 (45%), Positives = 176/277 (63%), Gaps = 5/277 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G +A+ V I+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGIYTYMPVGLRAIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+EM +P +Q +LW E+GR+D G+E++R+ DR+++ ++ PT EEV+TDI R+ Sbjct: 61 MNAAGAVEMLMPVVQPGELWQETGRWDKMGEELMRVKDRHERDLVIQPTSEEVVTDIART 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ +P FYQIQ KFRDE RPRFG+MR REF MKDAYSFD EG K SY KMF + Sbjct: 121 EIRSYKQMPVNFYQIQNKFRDERRPRFGIMRGREFTMKDAYSFDRDVEGMKVSYQKMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GL + A++G IGG SHEF V+A+TGE + D+ E + Sbjct: 181 YTRIFQRFGLAFRAVAADNGAIGGSGSHEFHVIAETGEDAIVY-SPESDYAANIEAAEAL 239 Query: 241 DIISLNSIVEQWTA----PYAATSDVHNEKLFDSLPE 273 + S + A P A + E+L +L Sbjct: 240 VPAAPRSPAAEPLAKTPTPGRAKCEAVAEQLGIALQR 276 Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats. Identities = 68/172 (39%), Positives = 101/172 (58%), Gaps = 3/172 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N D P+ K RGIEVGH+F GT+YS MSATF +GK + Sbjct: 382 PEAEVADLRNVVEGDPSPDGKGSLAICRGIEVGHVFMLGTRYSESMSATFLDENGKTQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE ++D +GIIWP S+APF++ + + + R ++++A Sbjct: 442 VMGCYGIGITRILGAAIEQNYDARGIIWPVSIAPFEVVICPVGYDRSEAVRAEADRLHAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 L G DV DD GE+ G FA +L+G P +V+VG + + + K+E++ R Sbjct: 502 LVAAGIDVILDDRGERPGVMFADWELIGVPFRVVVGERGLKEGKLELQGRRD 553 >gi|167630335|ref|YP_001680834.1| prolyl-tRNA synthetase [Heliobacterium modesticaldum Ice1] gi|226701294|sp|B0THP0|SYP_HELMI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|167593075|gb|ABZ84823.1| prolyl-tRNA synthetase [Heliobacterium modesticaldum Ice1] Length = 575 Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 119/323 (36%), Positives = 171/323 (52%), Gaps = 5/323 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F P L+E P +AE+ SH+L+LR G I + S G+Y +LPLGQ+ L + AI+REE Sbjct: 1 MRMSRLFAPTLREIPAEAEVISHQLLLRAGFIRRSSAGVYHYLPLGQRVLQRIMAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N G E+ +P +Q A++W++SGR+ YG E+ RL DR+ + PTHEE +TD+ ++ Sbjct: 61 MNAAGGQELLMPIIQPAEIWLQSGRWHVYGDELFRLKDRHQRDFCLSPTHEESITDLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++ SYR+LP Y I K+RDE RPRFG+MR REF+MKD YSFD G SY KM+ + Sbjct: 121 NVSSYRDLPMLLYHITNKYRDERRPRFGLMRGREFIMKDLYSFDRDEAGLHESYMKMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGD-LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y+ IF R GL P+ A+ G IGG SHEF+VLA++GE ++ D+ +E + Sbjct: 181 YVNIFRRCGLTFRPVEADPGAIGGTGGSHEFMVLAESGEAEIVYCDAC-DYAANTEKAEC 239 Query: 240 D---DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 VEQ P T + L + + + + + Sbjct: 240 KPQVTPGLPPLPVEQVATPDQKTIEEVCNFLKVAPADTIKTMVFRADDDLVMALIRGDRE 299 Query: 297 PMSATFKGADGKDHYVQMGSYGI 319 K G Sbjct: 300 INEVKLKNLLGCLDLRMATEEEC 322 Score = 177 bits (448), Expect = 4e-42, Method: Composition-based stats. Identities = 70/189 (37%), Positives = 105/189 (55%), Gaps = 2/189 (1%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 AT+D+ + + P+ ARGIEVG +F GTKYS ++ TF G+++ + MG Sbjct: 379 ATADLRLVQAGEPCPQCGAPLKKARGIEVGQVFKLGTKYSKALNCTFLDEKGQENLMVMG 438 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YG+G R +AA IE +HD GI+WP ++APF++ ++ + D +A E IY L Sbjct: 439 CYGVGVSRTMAAAIEQNHDDNGIVWPMAIAPFQVLVVPVSNKDAAQMEAAEAIYKELIAK 498 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G D DD E+ G +F ADL+G P+++ VG+K SD VE+K R G + S E+V+ Sbjct: 499 GVDTLLDDRPERAGVKFKDADLIGIPVRITVGNKLASDGVVEVKLRRGGEQFTASREDVV 558 Query: 436 NYASHRFSN 444 Sbjct: 559 AQVQALIRE 567 >gi|268316191|ref|YP_003289910.1| threonyl-tRNA synthetase [Rhodothermus marinus DSM 4252] gi|262333725|gb|ACY47522.1| threonyl-tRNA synthetase [Rhodothermus marinus DSM 4252] Length = 662 Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 78/443 (17%), Positives = 139/443 (31%), Gaps = 38/443 (8%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E RD +L L T + G+ WLP G + + +REEQ R G Sbjct: 240 YLHRLEEARKRDHRRLGRELELFT-FSQKVGPGLPLWLPRGATLRETLINFLREEQIRRG 298 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA---DRNDKAMIYGPTHEEVMTDIFRSHI 122 + P + +L+ SG Y Y + + P + I+ Sbjct: 299 YQPVVTPHIARLELYKTSGHYPYYKDSQFPPMIENPETGEGYLLKPMNCPHHIMIYADRP 358 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR LP + +R E G+ R R F + DA+ F + + + Sbjct: 359 RSYRELPLRLAEFGQVYRYEQTGELSGLTRVRGFTIDDAHIFCRPDQVKDE-FKNVIDLT 417 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L +F LG + + + + + + Sbjct: 418 LYVFRSLGFDEFEAQISLRD-------------PNNREKYVGDDELWEQAEQAIREAAAE 464 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + A Y D + D+L ++ ++ Sbjct: 465 MGLQATEELGEAAFYGPKLDFM---VRDALGRRWQLGTVQLDYILP--------ERFDLY 513 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + GAD + H + G++ V+ G +W + + Sbjct: 514 YIGADNQKHRPVMIHRAPFGSLERFIGVLIEHCAGNFPLW------LAPVQVAVLPLSDE 567 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D E + RL + G V D E IG + A++ P +IVG + V ++ Sbjct: 568 LNDYAEAVGRRLLEAGFRVEVDTRTETIGYKIRQAEVQKIPYMLIVGRREREAGTVAVRK 627 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 G + +L+E I Sbjct: 628 HGEGDQGPATLDEFIERLRTEIE 650 >gi|187931727|ref|YP_001891712.1| threonyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica FSC147] gi|238691566|sp|B2SGS3|SYT_FRATM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|187712636|gb|ACD30933.1| threonyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica FSC147] Length = 634 Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 144/442 (32%), Gaps = 41/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD L L + S GI W G + V +R N+ G Sbjct: 230 YLNMLEEAEKRDHRKIGKVLDLF--HFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG Y + M ++ P + ++ + + SY Sbjct: 288 CSEIRTPLIADFSLWQKSGHASKYAENMF-ATKSENRDFAIRPMNCPTCVQVYNTKLHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F + + + + Sbjct: 347 RDLPIRMAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEV- 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++ P E D D Sbjct: 406 YKDFGFNDFAVKIALRPENRIGDDE-----------------TWDKSEQMLKNALDANNV 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ A Y + H L D++ + + ++ G AT+ Sbjct: 449 SYELLPGEGAFYGPKIEFH---LKDAIGRSWQCGTIQLDFSMPQRLG--------ATYID 497 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G+ V + +G++ ++ + G +W V + + N D Sbjct: 498 KNGEKQVPVMLHRAIVGSLERFIGMLIEHYAGNLPLWLAPVQVAVMGISN------NQDD 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C++++ L K G D E+IG + LL P VI+G + I+ Sbjct: 552 YCKEVFIMLEKNGIRAKLDLRNEKIGFKIREHTLLRVPYLVILGKNEQEQKIITIRKHSG 611 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS+++ + + Sbjct: 612 EDLGQMSVDDFCAFLDKQIQAK 633 >gi|261822741|ref|YP_003260847.1| prolyl-tRNA synthetase [Pectobacterium wasabiae WPP163] gi|261606754|gb|ACX89240.1| prolyl-tRNA synthetase [Pectobacterium wasabiae WPP163] Length = 572 Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 124/235 (52%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYMLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLWVESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWVESGRWDQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 EVSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQTTYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+ L ++A++G IGG+ SHEF VLA +GE + D+ E Sbjct: 181 YSKIFSRMDLDFRAVQADTGSIGGNASHEFQVLATSGEDDIVF-STESDYAANIE 234 Score = 173 bits (437), Expect = 8e-41, Method: Composition-based stats. Identities = 70/187 (37%), Positives = 109/187 (58%), Gaps = 3/187 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGHIF G+KYS + AT +G DG++ + MG Sbjct: 384 VADIRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGSKYSEALKATVQGEDGRNQTLTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKV 375 YGIG RVVAA IE +HD +GIIWPD++APF ++++ + H ++ E IY +L Sbjct: 444 YGIGVTRVVAAAIEQNHDERGIIWPDAIAPFHVAILPMNMHKSFRVKEVAEDIYQQLRAK 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + ++E K+R G ++ + E+I Sbjct: 504 GIEVLLDDRKERPGVMFADMELIGVPHTIVIGDRNLDSEEIEYKNRRIGEKQMIKTGEII 563 Query: 436 NYASHRF 442 ++ Sbjct: 564 DFLLANI 570 >gi|193211793|ref|YP_001997746.1| threonyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327] gi|193085270|gb|ACF10546.1| threonyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327] Length = 661 Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 68/443 (15%), Positives = 148/443 (33%), Gaps = 37/443 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + + RD +L L + + G+ WLP G + + ++ EQ + G + Sbjct: 249 RMEEARKRDHRKLGAELGLFM-LTPEVGSGLPIWLPNGAIIRNELETFLKAEQRKRGYVP 307 Query: 69 MSVPTLQSADLWVESGRYDSYGKEML---RLADRNDKA--MIYGPTHEEVMTDIFRSHIK 123 + P + + +L+ SG Y Y D + + P + I+ ++ Sbjct: 308 VYTPHIGNIELYKRSGHYPYYSDSQFPPLTYKDETGREEQYLLKPMNCPHHHLIYSQTLR 367 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + +R E G++R+R F D++ + + Sbjct: 368 SYRDLPIRLTEFGTVYRHEQSGELNGLVRARGFTQDDSHIYCRPDQLVDE-ICNAIDLTR 426 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +F+ LG + R +++ + + + D + Sbjct: 427 FVFNTLGFDDVETRLSLHD-------------PENQSKYGGTAEVWEQAEKDVKEAADRM 473 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I + Y D + D++ ++ ++ ++ Sbjct: 474 GIKYFIGIGEASFYGPKIDFI---VRDAIGRKWQLGTVQVDYVMP--------ERFDLSY 522 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G+DG+ H + I + +P +AP +++++ I + Sbjct: 523 IGSDGQKHRPVVIHRAPFGSMER--FIGVLIEHTAGNFPLWLAPVQVAVLPIA---EDVH 577 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D ++YA+L G D E+IG + A++ P +I+G +V ++ Sbjct: 578 DYAREVYAKLHAAGIRAELDLRSEKIGKKIREAEVSKIPAMLIIGRNEQEKGEVSLRRHR 637 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 G ++E+I Sbjct: 638 KGDEGSFGVDELIARLREEIDQR 660 >gi|260219598|emb|CBA26443.1| Threonyl-tRNA synthetase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 665 Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 85/444 (19%), Positives = 151/444 (34%), Gaps = 41/444 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + L +L+E RD +L L I +HS G W P G V +R+ Sbjct: 258 QQHLTMLEEAEKRDHRKLGRELDLF--HIDEHSPGTVFWHPKGWTLWQGVEQYMRKVYQD 315 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G +E+ P + LW ++G +D Y + M + + P + I++ IK Sbjct: 316 NGYLEVKGPQIIDKSLWEKTGHWDKYRENMFT-TESEKRDYALKPMNCPGHILIYKQGIK 374 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP F + R+E G+MR R F D + F T + + Sbjct: 375 SYRDLPLRFGEFGQCHRNEPSGGLHGIMRVRAFTQDDGHIFC-TEDQIQDEVKAFTTLLQ 433 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +++ G +I + + P + E D + Sbjct: 434 KVYKDFGFTNIIYKLSTRPEKRIGTEE-----------------GWDRAENALAEGLRAS 476 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + L D+L + ++ + A F Sbjct: 477 GCDFEYLPGEGAFYGPKIEY---TLKDALGRPWQCGTIQVDPNLP--------ERLDAEF 525 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DG H + +G++ ++ + P +AP +++++NI Sbjct: 526 VGEDGSRHRPVMLHRAIVGSLERFIGILI---EESAGALPAWLAPVQVAVLNIT---DAQ 579 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D + L G V D E+I + + P V++G K ++ V ++ R Sbjct: 580 ADYARSVAKTLQNQGLRVHLDLRNEKITYKIREHSMQKLPYLVVIGDKEMAAGAVAVRAR 639 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 M LE I + +N Sbjct: 640 GGQDLGAMPLESFIERITADIANK 663 >gi|124025364|ref|YP_001014480.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A] gi|166225477|sp|A2C155|SYT_PROM1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123960432|gb|ABM75215.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A] Length = 640 Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 78/445 (17%), Positives = 150/445 (33%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y I + RD KL L + + G+ W P G + IRE + Sbjct: 228 LKEYINRIEEAEKRDHRKLGKKLSLF--HFQEEAPGMIFWHPNGWTIYRVLQDFIRETIS 285 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + LW +SG +D + ++M +K P + +F + Sbjct: 286 KYDYQELKSPQIVCRSLWEKSGHWDKFKEDMFTTT-SENKEYAIKPMNCPCHVQVFNQGL 344 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + R+E G+MR R F+ D + F + + Sbjct: 345 KSYRDLPIRLSEFGSCHRNEPSGALHGLMRVRNFVQDDGHIFCTNEQIQEE-VQSFIDLV 403 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G SI ++ + P S D D + + D Sbjct: 404 FEVYKAFGFNSILIKLSTRPEKR-----------------VGSDDVWDKSEKALSDALDS 446 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 S++ A Y + L D L + ++ ++++ Sbjct: 447 KGLDWSLLPGEGAFYGPKIEF---SLKDCLNRVWQCGTIQVDFSMP--------ERLNSS 495 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + DGK + +G+ ++ ++ G IW + + + Sbjct: 496 YIDVDGKKQPPVMLHRAILGSFERFIGILIENYSGNLPIWLCPLQIVVMGIT------DR 549 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 DAC ++L K G D E++G + + P +I+G K ++++ ++ Sbjct: 550 NNDACLDTKSKLIKYGFRASVDTRNEKVGFKIREHTMQRIPFLIIIGDKEEENNEISVRT 609 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R M+L++ S Sbjct: 610 REGKDLGKMTLDKFKVIMDESISKK 634 >gi|325287305|ref|YP_004263095.1| threonyl-tRNA synthetase [Cellulophaga lytica DSM 7489] gi|324322759|gb|ADY30224.1| threonyl-tRNA synthetase [Cellulophaga lytica DSM 7489] Length = 647 Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 71/436 (16%), Positives = 151/436 (34%), Gaps = 36/436 (8%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L T + G+ WLP G + + +++ Q + G + P Sbjct: 239 AKQRDHRKLGKELELFT-FSQKVGAGLPLWLPKGAALRERLENFLKKAQKKAGYEMVVTP 297 Query: 73 TLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 + +L+V SG Y YG++ + + D+ + P + ++F SY++LP Sbjct: 298 HIGQKELYVTSGHYAKYGEDSFQPIKTPKMDEEFLLKPMNCPHHCEVFNFKPHSYKDLPK 357 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F + +R E G+ R R F DA+ F TP+ + + L + + LG Sbjct: 358 RFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFC-TPDQLDQEFKNVIDLSLYVLNSLG 416 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + + + S + + + + I Sbjct: 417 FTNFKAQVSVRDLN-------------NPDKYIGSVENWEKAENAIINAAKEKGLDYVIE 463 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D + D+L N ++ ++ T+KG+D +D Sbjct: 464 SGEAAFYGPKLDFM---VKDALGRNWQLGTIQVDYNLP--------ERFDLTYKGSDNED 512 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 H + G+M A++ G +W + + + +K+ Sbjct: 513 HRPVMIHRAPFGSMERFIALLLEHTGGNFPLWLIPDQAIVLPV------SEKYEKYAKKV 566 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 L D+ E +G + A++ P +I+G + + + ++ Sbjct: 567 LNSLENDEIRALLDNRNETVGKKIREAEMNKIPFMIIIGENEEATNTISVRKHGGEDLGS 626 Query: 429 MSLEEVINYASHRFSN 444 +S+++ + + ++ Sbjct: 627 ISIKDFSDLVTSEINS 642 >gi|257452295|ref|ZP_05617594.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|317058838|ref|ZP_07923323.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|313684514|gb|EFS21349.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] Length = 637 Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 80/439 (18%), Positives = 162/439 (36%), Gaps = 42/439 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 FL +++E RD +L L + ++ G +LP G + + + R E + G Sbjct: 230 FLRLMEEAEKRDHRKLGKELELF--FLSEYGPGFPFFLPKGMVLRNTLIDLWRAEHEKAG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +++ P + + +LW SG + +Y + M + +D P + F+ SY Sbjct: 288 YVQIDTPIMLNRELWEISGHWFNYRENMYTSS-IDDVDFAIKPMNCPGGVLAFKYQQHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ R E G+ R R F D++ F +T E + + + Sbjct: 347 RDLPARVAELGKVHRHEFSGALHGLFRVRAFTQDDSHIF-MTEEQIESEIIGVVNLIDKF 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + +L + + P + E A+T + + + Sbjct: 406 YSKLFGFQYSIELSTRPEKSIGTDEIWEKAET-----------------ALAGALNHLGR 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D K+ D++ + ++ F ++ T+ G Sbjct: 449 EFKINEGDGAFYGPKLDF---KIKDAIGRTWQCGTIQLD----FNLPERFD----VTYIG 497 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ ++ + G +W V +++ + C Sbjct: 498 EDGEKHRPVMIHRVIYGSIERFIGILIEHYAGAFPMWLAPVQVKVLTI------NDECAP 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++ A+L + G DD E IG + A+ P+QVI+G + +V ++ Sbjct: 552 YAKEVVAQLKEQGIRAELDDRSESIGYKIREANGRYKIPMQVIIGKNEIEKREVNVRRFG 611 Query: 423 TGIREDMSLEEVINYASHR 441 + +E M L+ + Sbjct: 612 SQAQESMELDAFLAMVKEE 630 >gi|71906284|ref|YP_283871.1| prolyl-tRNA synthetase [Dechloromonas aromatica RCB] gi|114152186|sp|Q47ID0|SYP_DECAR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|71845905|gb|AAZ45401.1| Prolyl-tRNA synthetase, bacterial [Dechloromonas aromatica RCB] Length = 576 Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 126/283 (44%), Positives = 169/283 (59%), Gaps = 1/283 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F L+E P DAE+ S K+MLR G I + + GIY+W+PLG + L V I+REE Sbjct: 1 MRTSQFFFTTLKEAPADAEVISQKMMLRAGYIKRAAAGIYTWMPLGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q A+LW ESGR++ YG E+LR DR+ + + GPTHEEV+TD+ R Sbjct: 61 MNNAGALELLMPAVQPAELWQESGRWEQYGPELLRFKDRHQREFVIGPTHEEVITDVVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE+RPRFGVMR REFLMKD YSF + + K Y M+ + Sbjct: 121 DVKSYRQLPIHLYQIQTKFRDEIRPRFGVMRGREFLMKDGYSFHASFDDLKREYGNMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSENTDF 239 Y RIF RLGLK + A++G IGG SHEF VLAD+GE + FC + Sbjct: 181 YSRIFSRLGLKFRAVAADTGSIGGTGSHEFHVLADSGEDDIAFCPDSGYAANVELAEAMA 240 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 + + + F LP ++ V + + Sbjct: 241 PNEARAAASTLMEKTHTPGKMACADVAKFLELPLDRIVKSIAV 283 Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats. Identities = 61/191 (31%), Positives = 101/191 (52%), Gaps = 3/191 (1%) Query: 255 PYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P D+ N D+ P+ K RGIEVGHIF KY+ ++ + GK + Sbjct: 383 PEPEVFDIRNVVAGDASPDGQGKLEILRGIEVGHIFQLRQKYAEALNCVYLDDSGKSQIM 442 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 +MG YGIG R+V A IE +D KGII P ++APF++ ++ + + + + +++YA Sbjct: 443 EMGCYGIGVSRIVGAAIEQGNDDKGIILPPAIAPFEVCIVPMGYHKSEAVKASADQLYAD 502 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L K+G DV DD E+ G FA +L+G P +V++G + + D E K R+ ++ Sbjct: 503 LKKIGVDVVLDDRNERPGVMFADMELIGIPHRVVIGERGLKDGLFEYKSRIDAEPTMVAQ 562 Query: 432 EEVINYASHRF 442 +++ + Sbjct: 563 TDIVTLLQGKL 573 >gi|325577191|ref|ZP_08147675.1| proline--tRNA ligase [Haemophilus parainfluenzae ATCC 33392] gi|325160773|gb|EGC72894.1| proline--tRNA ligase [Haemophilus parainfluenzae ATCC 33392] Length = 571 Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 141/433 (32%), Positives = 202/433 (46%), Gaps = 49/433 (11%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P +A I SH+LMLR GMI + G+Y+W+P G + L V IIREE Sbjct: 1 MRTSQYLFSTLKETPAEAAIVSHQLMLRAGMIRPLASGLYNWMPTGWRVLRKVEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +++GA+E+ +P +Q A+LW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MDKSGALEIKMPVVQPAELWEESGRWEQYGPELLRFEDRGNRHFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + +Y M+ + Sbjct: 121 EVSSYRQLPINLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHADHSSLQQTYEVMYQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP------- 233 Y IF+RLGL ++A++G IGG SHEF VLA++GE V D+ Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLANSGEDDVIF-STESDYAANIELAEAV 239 Query: 234 -----------SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 E D + ++ +VEQ+ P T K ++ + Sbjct: 240 AIGERAAPTKAMELVDTPNAKTIAELVEQFNLPIEKTVKTLIVK-----GASEEQPLVAL 294 Query: 283 EVGHIFYFGTKYSLP-----MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + + F + G +G + + VI Sbjct: 295 VIRGDHELNEIKAEKLPEVASPFEFADEAVIKAKIGAGVGSLGPVNLNIPVIIDRSVALV 354 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYA-------------RLSKVGCDV--FWD 382 + NI V I L K G +V + Sbjct: 355 SDFSAGANIDGKHYFNINWERDVALPKVADIRNVVEGDPSPDGKGTLLIKRGIEVGHIF- 413 Query: 383 DMGEQIGSQFAVA 395 Q+G +++ A Sbjct: 414 ----QLGKKYSEA 422 Score = 179 bits (453), Expect = 1e-42, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 113/207 (54%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D +I + +D+ N D P+ K + RGIEVGHIF G KYS M Sbjct: 364 DGKHYFNINWERDVALPKVADIRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGKKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 +AT +G DG+ V MG YGIG RVVAA IE D + + D +APF ++++ + Sbjct: 424 NATVQGEDGRPMVVTMGCYGIGVTRVVAAAIEQHFDERGIVWPTDEIAPFTVAVLPMNMH 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + ++ E++Y L G +V +DD E+ G FA +L+G P V++G K +++ ++ Sbjct: 484 KSESVQEYAEELYCTLQAQGVEVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K+R TG ++ ++ E+++++ + Sbjct: 544 EYKNRRTGEKQMIAKEQLLDFLKGQIK 570 >gi|310779473|ref|YP_003967806.1| threonyl-tRNA synthetase [Ilyobacter polytropus DSM 2926] gi|309748796|gb|ADO83458.1| threonyl-tRNA synthetase [Ilyobacter polytropus DSM 2926] Length = 640 Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 76/441 (17%), Positives = 158/441 (35%), Gaps = 42/441 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L L+E RD +L L + ++ G ++P G + + + R+E + Sbjct: 229 KAHLKFLEEAEKRDHRKIGKELGLF--FMSEYGPGFPFFMPKGMTIRNILIDLWRKEHTK 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G ++ P + + +LW SG + +Y + M ++ ++ P + ++ + Sbjct: 287 AGYEQIMTPIMLNKELWETSGHWYNYRENMYT-SEIDETEFAIKPMNCPGGVLAYKQEMH 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP ++ R E G+MR R F DA+ F +TPE + + Sbjct: 346 SYKDLPIRAGELGTVHRHEFSGALHGLMRVRSFTQDDAHIF-MTPEQIEDEIIGVIELID 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + + L + + P S E + + + Sbjct: 405 KFYSGLFGFEYNIELSTKPEKAIGSDE-----------------IWEKAESALEGAMKRL 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I A Y D K+ D++ + ++ F ++ + Sbjct: 448 GKEYKINPGDGAFYGPKLDF---KIKDAIGRTWQCGTIQLD----FNLPERFD----INY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DG+ H + G++ ++ + G +W + + I + Sbjct: 497 IGEDGEKHRPVMIHRVVYGSIERFIGILIEHYAGAFPLW------IAPTQVKILTINDEV 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEIKH 420 ++I A+L + D E IG + A+ P+QVI+G V++ +V ++ Sbjct: 551 VPYAKEIMAKLQEEEIRAEIDSRTESIGYKIREANGKFKVPVQVILGKDEVANREVNVRR 610 Query: 421 RLTGIREDMSLEEVINYASHR 441 + +E M L++ + Sbjct: 611 FGSKDQESMKLDDFVKMIKEE 631 >gi|134301672|ref|YP_001121640.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis WY96-3418] gi|166223343|sp|A4IX68|SYT_FRATW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|134049449|gb|ABO46520.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis WY96-3418] Length = 634 Score = 243 bits (619), Expect = 6e-62, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 144/442 (32%), Gaps = 41/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD L L + S GI W G + V +R N+ G Sbjct: 230 YLNMLEEAEKRDHRKIGKVLDLF--HFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG Y + M ++ P + ++ + + SY Sbjct: 288 CSEIRTPLIADFSLWQKSGHASKYAENMF-ATKSENRDFAIRPMNCPTCVQVYNTKLHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F + + + + Sbjct: 347 RDLPIRMAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEV- 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++ P E D D Sbjct: 406 YKDFGFNDFAIKIALRPENRIGDDE-----------------TWDKSEQMLKNALDANNV 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ A Y + H L D++ + + ++ G AT+ Sbjct: 449 SYELLPGEGAFYGPKIEFH---LKDAIGRSWQCGTIQLDFSMPQRLG--------ATYID 497 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G+ V + +G++ ++ + G +W V + + N D Sbjct: 498 KNGEKQVPVMLHRAIVGSLERFIGMLIEHYAGNLPLWLAPVQVAVMGISN------NQDD 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C++++ L K G D E+IG + LL P VI+G + I+ Sbjct: 552 YCKEVFIMLEKNGIRAKLDLRNEKIGFKIREHTLLRVPYLVILGKNEQEQKIITIRKHSG 611 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS+++ + + Sbjct: 612 EDLGQMSVDDFCAFLDKQIQAK 633 >gi|238021436|ref|ZP_04601862.1| hypothetical protein GCWU000324_01336 [Kingella oralis ATCC 51147] gi|237868416|gb|EEP69422.1| hypothetical protein GCWU000324_01336 [Kingella oralis ATCC 51147] Length = 611 Score = 243 bits (619), Expect = 6e-62, Method: Composition-based stats. Identities = 126/239 (52%), Positives = 165/239 (69%), Gaps = 1/239 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLMLR G+I ++ G+Y+W+P+G + L V AI+REE Sbjct: 45 MKASQFFISTLKEAPAEAVLASHKLMLRAGLIKANASGLYTWMPMGLRVLRKVEAIVREE 104 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q ADLW ESGR+D YG E+LR+ DR+D A + PT EE++TDI R Sbjct: 105 MNRAGAIELLMPVVQPADLWKESGRWDFYGDELLRITDRHDNAFCFSPTCEELITDIVRK 164 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE RPRFGVMR+REF+MKDAYSF E K +Y M+ + Sbjct: 165 EINSYKQLPKNFYHIQTKFRDERRPRFGVMRAREFVMKDAYSFHADFESLKATYQTMYDA 224 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y RIF+RLGL P+ A++G IGG SHEF VLAD+GE + S D+ E Sbjct: 225 YCRIFNRLGLDYRPVAADTGSIGGTGSHEFQVLADSGEDVIAYSD-ASDYAANVELAQT 282 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 3/221 (1%) Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS--LPENKRVS 278 + + DD A D+ N D + Sbjct: 388 KVYADFACEKGADWVIGANDDDHHYTGFNFGRDAAEPEFVDLRNVIAGDPSPCGKGSLKL 447 Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KYS ++A+F ++GK ++MG YGIG R+VAA IE ++D +GI Sbjct: 448 ARGIEVGHVFQLRDKYSAALNASFLDSNGKSQIMEMGCYGIGITRIVAAAIEQNNDERGI 507 Query: 339 IWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IW +++APF + ++ + R+A ++IYA L G DV DD E+ G ++L Sbjct: 508 IWTEAMAPFSVVIVPMNYKKSNSVREAADQIYADLQAAGVDVLLDDRDERAGVLLNDSEL 567 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 LG P ++++G + + + VE R +G + L E++ Sbjct: 568 LGIPHRIVIGDRALKEGNVEYAERRSGESISVPLNEIVAKI 608 >gi|56707928|ref|YP_169824.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis SCHU S4] gi|110670399|ref|YP_666956.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC198] gi|224457008|ref|ZP_03665481.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|254370416|ref|ZP_04986421.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874733|ref|ZP_05247443.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|73919791|sp|Q5NGL8|SYT_FRATT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123063497|sp|Q14I20|SYT_FRAT1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56604420|emb|CAG45450.1| Threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis SCHU S4] gi|110320732|emb|CAL08833.1| Threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC198] gi|151568659|gb|EDN34313.1| hypothetical protein FTBG_00181 [Francisella tularensis subsp. tularensis FSC033] gi|254840732|gb|EET19168.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|282159111|gb|ADA78502.1| Threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis NE061598] Length = 634 Score = 243 bits (619), Expect = 6e-62, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 144/442 (32%), Gaps = 41/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD L L + S GI W G + V +R N+ G Sbjct: 230 YLNMLEEAEKRDHRKIGKVLDLF--HFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG Y + M ++ P + ++ + + SY Sbjct: 288 CSEIRTPLIADFSLWQKSGHASKYAENMF-ATKSENRDFAIRPMNCPTCVQVYNTKLHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F + + + + Sbjct: 347 RDLPIRMAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEV- 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++ P E D D Sbjct: 406 YKDFGFNDFAVKIALRPENRIGDDE-----------------TWDKSEQMLKNALDANNV 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ A Y + H L D++ + + ++ G AT+ Sbjct: 449 SYELLPGEGAFYGPKIEFH---LKDAIGRSWQCGTIQLDFSMPQRLG--------ATYID 497 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G+ V + +G++ ++ + G +W V + + N D Sbjct: 498 KNGEKQVPVMLHRAIVGSLERFIGMLIEHYAGNLPLWLAPVQVAVMGISN------NQDD 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C++++ L K G D E+IG + LL P VI+G + I+ Sbjct: 552 YCKEVFIMLEKNGIRAKLDLRNEKIGFKIREHTLLRVPYLVILGKNEQEQKIITIRKHSG 611 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS+++ + + Sbjct: 612 EDLGQMSVDDFCAFLDKQIQAK 633 >gi|227114059|ref|ZP_03827715.1| prolyl-tRNA synthetase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 572 Score = 243 bits (619), Expect = 6e-62, Method: Composition-based stats. Identities = 124/235 (52%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYMLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLWVESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWVESGRWDQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 EVSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQVTYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+ L ++A++G IGG+ SHEF VLA +GE + D+ E Sbjct: 181 YSKIFSRMDLDFRAVQADTGSIGGNASHEFQVLATSGEDDIVF-STESDYAANIE 234 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 70/187 (37%), Positives = 109/187 (58%), Gaps = 3/187 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGHIF G+KYS + AT +G DG++ + MG Sbjct: 384 VADIRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGSKYSEALKATVQGEDGRNQTLTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKV 375 YGIG RVVAA IE +HD +GIIWPD++APF ++++ + H ++ E IY +L Sbjct: 444 YGIGVTRVVAAAIEQNHDERGIIWPDAIAPFHVAILPMNMHKSFRVKEVAEDIYQQLRAK 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + ++E K+R G ++ + E+I Sbjct: 504 GIEVLLDDRKERPGVMFADMELIGVPHTIVIGDRNLDSEEIEYKNRRVGEKQMIKTSEII 563 Query: 436 NYASHRF 442 ++ Sbjct: 564 DFLLANI 570 >gi|54296718|ref|YP_123087.1| prolyl-tRNA synthetase [Legionella pneumophila str. Paris] gi|81822631|sp|Q5X756|SYP_LEGPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|53750503|emb|CAH11897.1| Prolyl-tRNA synthetase (Proline--tRNA ligase)(ProRS)(Global RNA synthesis factor) [Legionella pneumophila str. Paris] Length = 569 Score = 243 bits (619), Expect = 6e-62, Method: Composition-based stats. Identities = 135/393 (34%), Positives = 200/393 (50%), Gaps = 11/393 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FL +E P DAEIASH+LMLR+GMI + G+Y+W+PLG + L V I+REE Sbjct: 1 MRASQWFLVTQKETPNDAEIASHQLMLRSGMIRKLGSGLYTWMPLGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+T A+E+ +P++Q A+LW E+GR++++G ++L + D N + +GPTHEEV+TDI R+ Sbjct: 61 MNKTHAMELLMPSVQPAELWQETGRWETFGGQLLTMKDSNQREYCFGPTHEEVITDIMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L+ E + +Y M+ + Sbjct: 121 ELQSYKQLPVNFYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHLSLESLQETYKDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GLK + A++G IGG SHEF VLA++GE +F S + T Sbjct: 181 YCRIFDRMGLKYRAVEADTGAIGGSASHEFQVLAESGEDLIFYSDASDYAANIEQATSLK 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF------GTKY 294 + + E T +E + + I G G Sbjct: 241 PPKANQACNETITLVDTPNQKTIDEVASFLGIASNQTIKTLIVKGKEHPMVALVLRGDDE 300 Query: 295 SLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + AT + ++ I +I + Sbjct: 301 LNEVKATKHPLVHSPLSFIDEELILKTLKTPLGSIGPIQLNIPVIVDHHALAMPSFVCGA 360 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 D+ +A + D +D + Sbjct: 361 NQADKHFINAAWE-----RDAKYDDAYDLRNVK 388 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 3/197 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A Y D+ N K D P+ + RGIEVGH+F G KY+ M+A+ G+ Sbjct: 373 ERDAKYDDAYDLRNVKEGDQSPDGRGTLHCCRGIEVGHVFQLGDKYAKAMNASVINEQGQ 432 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 + MG YG+G RVVAA IE HD GIIWP ++APF++++I + A Q ++ E Sbjct: 433 LQTMIMGCYGLGITRVVAAAIEQHHDEHGIIWPQALAPFQVNIIPLNGARSQTVKEQAES 492 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +Y +L G DV DD E+ G FA DL+G P +++V + + +E K R + + Sbjct: 493 LYQQLKSHGIDVLLDDRNERAGVLFADNDLIGIPHRLVVSERNLEQGCIEYKSRTSSETQ 552 Query: 428 DMSLEEVINYASHRFSN 444 ++L++V+N+ + Sbjct: 553 LINLDKVVNFIIELINK 569 >gi|307609489|emb|CBW98986.1| prolyl-tRNA synthetase [Legionella pneumophila 130b] Length = 569 Score = 243 bits (619), Expect = 6e-62, Method: Composition-based stats. Identities = 136/393 (34%), Positives = 200/393 (50%), Gaps = 11/393 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FL +E P DAEIASH+LMLR+GMI + G+Y+W+PLG + L V I+REE Sbjct: 1 MRASQWFLVTQKETPNDAEIASHQLMLRSGMIRKLGSGLYTWMPLGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+T A+E+ +P++Q A+LW E+GR++++G ++L + D N + +GPTHEEV+TDI R+ Sbjct: 61 MNKTHAMELLMPSVQPAELWQETGRWETFGGQLLTMKDSNQREYCFGPTHEEVITDIMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L+ E + +Y M+ + Sbjct: 121 ELQSYKQLPVNFYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHLSLESLQETYKDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GLK + A++G IGG SHEF VLA++GE +F S + T Sbjct: 181 YCRIFDRMGLKYRAVEADTGAIGGSTSHEFQVLAESGEDLIFYSDASDYAANIEQATSLK 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF------GTKY 294 + S E T +E + + I G G Sbjct: 241 PPKANQSCNETITLVDTPNKKTIDEVASFLGIASNQTIKTLIVKGKEHPMVALVLRGDDE 300 Query: 295 SLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + AT + ++ I +I + Sbjct: 301 LNEVKATKHPLVHSPLSFIDEELILKTLKTPLGSIGPVKLNIPVIVDHQALAMPSFVCGA 360 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 D+ +A + D +D + Sbjct: 361 NQADKHFINAAWE-----RDAKYDDAYDLRNVK 388 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 3/197 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A Y D+ N K D P+ + RGIEVGH+F G KY+ M+A+ G+ Sbjct: 373 ERDAKYDDAYDLRNVKEGDPSPDGRGTLHCCRGIEVGHVFQLGDKYAKAMNASVINEQGQ 432 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 + MG YG+G RVVAA IE HD GIIWP ++APF++++I + A Q ++ E Sbjct: 433 LQTMIMGCYGLGITRVVAAAIEQHHDEHGIIWPQALAPFQVNIIPLNGARSQAVKEQAES 492 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +Y +L G DV DD E+ G FA DL+G P +++V + + +E K R + + Sbjct: 493 LYQQLKSHGIDVLLDDRNERAGVLFADNDLIGIPHRLVVSERNLEQGCIEYKSRTSSETQ 552 Query: 428 DMSLEEVINYASHRFSN 444 ++L++V+N+ + Sbjct: 553 LINLDKVVNFIIELINK 569 >gi|71083144|ref|YP_265863.1| threonyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062] gi|123734387|sp|Q4FNH9|SYT_PELUB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|71062257|gb|AAZ21260.1| Threonyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062] Length = 638 Score = 243 bits (619), Expect = 6e-62, Method: Composition-based stats. Identities = 78/439 (17%), Positives = 147/439 (33%), Gaps = 39/439 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD ++ L + S G W G K + A +R Q + Sbjct: 231 EYLKRIEEAEKRDHRKLGKEMDLF--HFREESPGSVFWHEKGWKLFQKLVAYMRARQEKA 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E++ P + LW +SG ++ YG+ M ++K P + +F +KS Sbjct: 289 GYKEVNTPEILDRSLWEKSGHWEKYGEHMYTSQTPDEKIFAIKPMNCPGHVQVFNQGLKS 348 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + R E G++R R F DA+ F + + L Sbjct: 349 YRDLPLRISEFGKVHRYEPSGALHGLLRVRAFTQDDAHIFCTEDQITSECLIVT-NLILD 407 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I+ LG + + ++ P + D + Sbjct: 408 IYKDLGFEDVILKYSDRPDLR-----------------VGDDNVWDKAEKALLDAVKASK 450 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 +I + A Y + L D++ + + +++ A+F Sbjct: 451 LQYTINKGEGAFYGPKIEF---VLRDAIGRDWQCGTLQVDLNLPGRLD--------ASFV 499 Query: 304 GADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG K V + G++ ++ ++ GK W + + + Sbjct: 500 DKDGTKKIPVMLHRALFGSLERFIGILIENYAGKFPFW------IAPLQVVVIPISEEFD 553 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++ +++ G D + + L PL +I G K V + V I+ Sbjct: 554 SYAKEVNEKINNAGISSEVDLKNHNLNYKIREHSLSKIPLLLICGKKEVDSNSVTIRRLD 613 Query: 423 TGIREDMSLEEVINYASHR 441 T +E+M L + S Sbjct: 614 TNKQENMELNLFLETFSAL 632 >gi|83589892|ref|YP_429901.1| prolyl-tRNA synthetase [Moorella thermoacetica ATCC 39073] gi|114152213|sp|Q2RJN1|SYP_MOOTA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|83572806|gb|ABC19358.1| prolyl-tRNA synthetase [Moorella thermoacetica ATCC 39073] Length = 573 Score = 243 bits (619), Expect = 6e-62, Method: Composition-based stats. Identities = 116/245 (47%), Positives = 161/245 (65%), Gaps = 1/245 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ P L+E P +AEI SH+L+LR G I + + GIY++LPLG++ L + IIREE Sbjct: 1 MRASELLAPTLRETPAEAEIVSHQLLLRGGFIRKAAAGIYTYLPLGRRVLAKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G E+ +P +Q A+LW ESGR++ YG+EM RL DR+ + GPTHEE++T + RS Sbjct: 61 MDRAGGQEVVLPIIQPAELWQESGRWEVYGEEMFRLQDRHRRQFCLGPTHEEIITALVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ K+RDE RPRFG++R REF+MKD YSFDL EG SY KM+ + Sbjct: 121 EVTSYKQLPLLLYQIQNKYRDERRPRFGLLRGREFIMKDLYSFDLDQEGLNQSYRKMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F R GL P++A+SG IGG+ SHEF+ LA GE + ++ D+ E Sbjct: 181 YSNVFRRCGLDFRPVQADSGAIGGNYSHEFMALATAGEALLVYCREC-DYAANVEIAVAK 239 Query: 241 DIISL 245 + + Sbjct: 240 ALPMI 244 Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 67/188 (35%), Positives = 103/188 (54%), Gaps = 2/188 (1%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 A D+ + + P+ ARGIEVG +F GTKYS + A + A G++H + MG Sbjct: 379 AVVDIRQVEAGEPCPQCGAPLAQARGIEVGQVFQLGTKYSGALGANYTDARGQEHPIVMG 438 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R +AA++E HD +GIIWP SVAP+++ +I D R E +Y L+ Sbjct: 439 CYGIGVSRTMAAIVEQCHDDQGIIWPLSVAPYQVVIIPASLKDDGQRQVAEGLYRELAAA 498 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V +DD E+ G +F ADL+G+PL++ VG + ++ V++K R + LE + Sbjct: 499 GVEVVYDDRDERAGLKFVEADLIGYPLRITVGKRTITSGTVDVKWRSRKEETPLPLEGLS 558 Query: 436 NYASHRFS 443 + Sbjct: 559 AQIQALLA 566 >gi|227537393|ref|ZP_03967442.1| threonine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300] gi|227242771|gb|EEI92786.1| threonine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300] Length = 641 Score = 243 bits (619), Expect = 6e-62, Method: Composition-based stats. Identities = 80/444 (18%), Positives = 151/444 (34%), Gaps = 36/444 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 + Y I + RD +L L + G+ WLP G + ++ Q Sbjct: 228 LTDYLKFIEEAKKRDHRKLGKELELFA-FSEKVGMGLPLWLPKGAALRQKLIDFMQRAQL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRS 120 + G + P + L+V SG Y+ YG++ + + P + +I+++ Sbjct: 287 KAGYEPVVTPHIGHKQLYVTSGHYEKYGEDSFQPIKTPVEGEEFFLKPMNCPHHCEIYKT 346 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SY++LP F + +R E G+ R R F DA+ F P+ K + K+ Sbjct: 347 KPRSYKDLPVRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCR-PDQVKEEFKKVID 405 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L +F LG + + D + D + Sbjct: 406 LVLYVFGALGFEDYIAQVSLR--------------DPENRTKYIGSDENWVLAERAIIEA 451 Query: 240 DDIISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 D L ++VE A Y D + D+L ++ ++ F +Y+ Sbjct: 452 ADEKGLPTVVEYGEAAFYGPKLDFM---VKDALGRKWQLGTIQVDYNLPERFELEYTGSD 508 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 +A V + G++ AV+ G+ +W + + Sbjct: 509 NAK-------HRPVMIHRAPFGSLERFIAVLIEHCAGRFPLWLAPEQFIVLPV------S 555 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + + +K+ L+ D E++G + A++ P +IVG K V + Sbjct: 556 EKYEEYAQKLLESLNNSDIRGLIDLRDEKVGRKIRDAEVKKLPYMLIVGEKEAESGTVSV 615 Query: 419 KHRLTGIREDMSLEEVINYASHRF 442 + +G M+ EE Sbjct: 616 RKHGSGDVGSMTPEEFREVLIKEI 639 >gi|89895282|ref|YP_518769.1| hypothetical protein DSY2536 [Desulfitobacterium hafniense Y51] gi|114152191|sp|Q24UG7|SYP_DESHY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|89334730|dbj|BAE84325.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 575 Score = 243 bits (619), Expect = 6e-62, Method: Composition-based stats. Identities = 126/398 (31%), Positives = 186/398 (46%), Gaps = 15/398 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ P L+E P +AE+ SH+L++R G+I + + GIY++LPLG + L + I+REE Sbjct: 1 MRVSQILNPTLREVPAEAEVVSHQLLVRAGLIRKSAAGIYTYLPLGLRVLRKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P +Q A+LW ESGR+D YG+E++RL DR+++ GPTHEE++TD+ R Sbjct: 61 MDAKGGQEVLLPIIQPAELWRESGRWDLYGQELMRLNDRHNREFCLGPTHEEIITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP YQIQ K+RDE RPRFG+MR REF+MKD YSFD G SY KM+ + Sbjct: 121 EIRSYKQLPLLLYQIQNKYRDERRPRFGLMRGREFIMKDLYSFDRDEAGLAESYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAE-SGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y RIF R GL P+ A+ G +HEF+VLA++GE V D D+ E Sbjct: 181 YTRIFTRCGLSFRPVEADAGAIGGTGGTHEFMVLAESGEAAVVYCPDC-DYAANVEKA-- 237 Query: 240 DDIISLNSIVEQWTAPY-------AATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + V+ Y T + E L S + + + I Sbjct: 238 -ECKPAPMAVDAPIGAYRSVDTPGTKTIEQVAEFLKVSKSDLVKSLLYQGDDKLILVLVR 296 Query: 293 KYSLPMSATFKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 A G +Q G + + + + Sbjct: 297 GDREINEIKVNNALGPFINLQLAGPEAVLEKLGCEPGYVGPIGAPKNLTVVADLEVPLMA 356 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 + + + + + D D G Sbjct: 357 KAVCGANAEDKHYVDAVPE--KDFRIDQILDLRMVNAG 392 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 68/186 (36%), Positives = 104/186 (55%), Gaps = 2/186 (1%) Query: 261 DVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ + P+ ARGIEVG +F GTKYS ++A F +G +H MG YG Sbjct: 385 DLRMVNAGEPCPQCGSPLKEARGIEVGQVFKLGTKYSKALNAVFLDENGAEHPCVMGCYG 444 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R +AA IE ++D GIIWP +AP+ + ++ + D R+ E +Y L K+G + Sbjct: 445 IGVSRTMAAAIEQNNDKDGIIWPIPIAPYHVIVVPVNMKDDQVRETGEALYQELLKLGVE 504 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 DD E+ G +F ADL+G+PL+V VGSK +++ +VE++ R TG + + +EE+ Sbjct: 505 AVLDDRDERPGVKFKDADLVGYPLRVTVGSKTLANGEVELRDRKTGEVQLVKVEELAGRI 564 Query: 439 SHRFSN 444 Sbjct: 565 QGMIRE 570 >gi|126650283|ref|ZP_01722511.1| threonyl-tRNA synthetase [Bacillus sp. B14905] gi|126592933|gb|EAZ86915.1| threonyl-tRNA synthetase [Bacillus sp. B14905] Length = 637 Score = 243 bits (619), Expect = 6e-62, Method: Composition-based stats. Identities = 73/442 (16%), Positives = 151/442 (34%), Gaps = 43/442 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +YF+ + + R+ +L L M + + G+ +L GQ + + + +R Q + Sbjct: 232 QYFVFLDEAEKRNHRKLGKELSLF--MFSEEAPGMPFYLANGQILRNELESYLRNLQAKY 289 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + + LW +SG +D Y M +D++ P + IF++ + S Sbjct: 290 DYREVRTPLMMNQRLWEQSGHWDHYKDNM-YFTQVDDQSFALKPMNCPGHMLIFKNSLHS 348 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + R E G++R R F DA+ F TP+ ++ Sbjct: 349 YRDLPIRMAEFGQVHRHEFSGALNGLLRVRSFCQDDAHIF-ATPQQIENEIALALKIIDE 407 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 +++ G + V T D + ++ Sbjct: 408 VYNVFGFQYS------------------VELSTRPDDYMGELSLWDQAEEALENVLTNLG 449 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 +I E A Y D+H + D++ + + + ++ F K+ T+ Sbjct: 450 IDYTINEGDGAFYGPKIDIH---IKDAIQRSHQCATVQLD----FQLPEKFD----LTYI 498 Query: 304 GADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + + + R + +IE I Sbjct: 499 NEHNEKVRPVVIHRAVFGSIDRFLGILIEHFGGAFPIWLAPQQVQVIAVA-------DAH 551 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +D +++ L V DD E++G + A L P +++G + + V ++ Sbjct: 552 QDYAKQVVKALQHEQIRVQLDDRQEKLGKKIREAQLHKIPYILVIGDRETAHQNVSVRRH 611 Query: 422 LTGIREDMSLEEVINYASHRFS 443 + S+ ++I + Sbjct: 612 GQQATVEYSISQLIEEMTEAIK 633 >gi|187251094|ref|YP_001875576.1| prolyl-tRNA synthetase [Elusimicrobium minutum Pei191] gi|226701286|sp|B2KCB2|SYP_ELUMP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|186971254|gb|ACC98239.1| Prolyl-tRNA synthetase [Elusimicrobium minutum Pei191] Length = 573 Score = 243 bits (619), Expect = 6e-62, Method: Composition-based stats. Identities = 117/264 (44%), Positives = 157/264 (59%), Gaps = 3/264 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++Y+LP L+E P+DA+ S KLMLR G+I + + GIY WLPLG K L V I+REE Sbjct: 1 MKLTQYYLPTLKEAPKDADTISAKLMLRAGLIRKTASGIYEWLPLGLKVLKKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P +Q +LW ESGR+ YGKE+LR+ DR + PT EEV+TD+ R Sbjct: 61 MDAAGAHEVWLPLIQPKELWEESGRWTYYGKELLRIKDRKGAEFCFAPTAEEVITDVVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQ KFRDE+RPRFGVMR+REF MKDAYSF T E Y K F + Sbjct: 121 DVTSYKQLPVALYQFASKFRDEIRPRFGVMRAREFYMKDAYSFHATEESINEWYLKFFEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y ++ R G K + A++G IGG+ SHEF+VLADTGE ++ Sbjct: 181 YKKVCTRCGFKFKAVEADTGAIGGNFSHEFMVLADTGENEIADCDCGYAANTEKAEIFKP 240 Query: 241 DIISLN---SIVEQWTAPYAATSD 261 + +E+ P A T + Sbjct: 241 KFPAAKEELKTIEKVNTPNATTIE 264 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 67/184 (36%), Positives = 96/184 (52%), Gaps = 3/184 (1%) Query: 260 SDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ D + + RGIEVGH F GTKYS M A F + K H MG Y Sbjct: 385 ADLKIASEGDLCGKCGKKFNFTRGIEVGHTFKLGTKYSQSMKAEFLDENQKSHPFLMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVG 376 GIG R+VAA IE SHD GIIWP +APF I L++I + ++ + IY +L++ G Sbjct: 445 GIGISRIVAAAIEQSHDENGIIWPAPLAPFDIYLVSIDTDINPKVKEETDSIYNQLTQAG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G +F ADL+G P ++++ S+ V + E K R + L ++ Sbjct: 505 LNVLLDDRNERPGIKFKDADLIGLPHRIVISSRTVETGEYEYKQRTSKEAIRRKLADISE 564 Query: 437 YASH 440 Sbjct: 565 QIKE 568 >gi|242242946|ref|ZP_04797391.1| threonyl-tRNA synthetase [Staphylococcus epidermidis W23144] gi|242233547|gb|EES35859.1| threonyl-tRNA synthetase [Staphylococcus epidermidis W23144] Length = 645 Score = 243 bits (619), Expect = 6e-62, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 151/444 (34%), Gaps = 31/444 (6%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD L L T G+ WLP G + I +++ Sbjct: 229 KAHLKMLEERRERDHRKIGKDLELFTNN-QLVGAGLPLWLPNGATIRREIERYIVDKEVS 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHI 122 G + P L + DL+ SG +D Y ++M ++ M+ P + I+++ Sbjct: 288 MGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPAMKLDEDEAMVLRPMNCPHHMMIYKNKP 347 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ R E ++ + + + P+ K + ++ Sbjct: 348 HSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQ 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G + R + D E + D++ Sbjct: 408 DVYKDFGFEDYRFRLS-----YRDPEDKHKYFDDDEM--------WEKAESMLKEASDEL 454 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y DV ++ ++ + + +S ++ F ++ T+ Sbjct: 455 GLTYEEAIGEAAFYGPKLDV---QVKTAMGKEETLSTAQLD----FLLPERFD----LTY 503 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG+ H + G+ + + + +I +N+ H Sbjct: 504 IGQDGEQHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPMQVEIIPVNVDLH----Y 559 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D + L G V DD E++G + A + P Q++VG K V + +V ++ Sbjct: 560 DYARLLQDELKSQGVRVEIDDRNEKMGYKIREAQMKKIPYQIVVGDKEVENQEVNVRKYG 619 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 + +E + +E I + Sbjct: 620 SEKQESVEKDEFIWNVIDEIRLKK 643 >gi|301155393|emb|CBW14859.1| prolyl-tRNA synthetase [Haemophilus parainfluenzae T3T1] Length = 571 Score = 243 bits (619), Expect = 6e-62, Method: Composition-based stats. Identities = 141/433 (32%), Positives = 203/433 (46%), Gaps = 49/433 (11%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P +A I SH+LMLR GMI + G+Y+W+P G + L V IIREE Sbjct: 1 MRTSQYLFSTLKETPAEAAIVSHQLMLRAGMIRPLASGLYNWMPTGWRVLRKVEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +++GA+E+ +P +Q A+LW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MDKSGALEIKMPVVQPAELWEESGRWEQYGPELLRFEDRGNRHFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + +Y+ M+ + Sbjct: 121 EVSSYRQLPINLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHADHASLQQTYDVMYQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP------- 233 Y IF+RLGL ++A++G IGG SHEF VLA++GE V D+ Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLANSGEDDVIF-STESDYAANIELAEAV 239 Query: 234 -----------SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 E D + ++ +VEQ+ P T K ++ + Sbjct: 240 AIGERAAPTKAMELVDTPNAKTIAELVEQFNLPIEKTVKTLIVK-----GASEEQPLVAL 294 Query: 283 EVGHIFYFGTKYSLP-----MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 + + F + G +G + + VI Sbjct: 295 VIRGDHELNEIKAEKLPEVASPFEFADEAVIKAKIGAGVGSLGPVNLNIPVIIDRSVALV 354 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYA-------------RLSKVGCDV--FWD 382 + NI V I L K G +V + Sbjct: 355 SDFSAGANIDGKHYFNINWERDVALPKVADIRNVVEGDPSPDGKGTLLIKRGIEVGHIF- 413 Query: 383 DMGEQIGSQFAVA 395 Q+G +++ A Sbjct: 414 ----QLGKKYSEA 422 Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D +I + +D+ N D P+ K + RGIEVGHIF G KYS M Sbjct: 364 DGKHYFNINWERDVALPKVADIRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGKKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 +AT +G DG+ V MG YGIG RVVAA IE D + + D +APF ++++ + Sbjct: 424 NATVQGEDGRPMVVTMGCYGIGVTRVVAAAIEQHFDERGIVWPTDEIAPFTVAVVPMNMH 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + ++ E++Y L G +V +DD E+ G FA +L+G P V++G K +++ ++ Sbjct: 484 KSESVQEYAEELYRTLQAQGVEVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K+R TG ++ ++ ++++++ + Sbjct: 544 EYKNRRTGEKQMIAKDQLLDFLKGQIK 570 >gi|220904224|ref|YP_002479536.1| prolyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254782896|sp|B8IZD1|SYP_DESDA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|219868523|gb|ACL48858.1| prolyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 574 Score = 243 bits (619), Expect = 6e-62, Method: Composition-based stats. Identities = 117/237 (49%), Positives = 165/237 (69%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S ++P L+E+P DAE+ SHKL+LR GM+ + + G+Y +LPLG + ++ + +REE Sbjct: 1 MRFSSCYIPTLKESPADAEVISHKLLLRAGMVRRLTSGLYIYLPLGLRVINKIARTVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P +Q DLW E+GR++ YGKE+LR DRN++ GPTHEEV+TD+ R Sbjct: 61 MEKAGFRELLMPMVQPGDLWKETGRWEHYGKELLRFKDRNEREYCLGPTHEEVITDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQ+Q KFRDE+RPRFG+MR REF+MKD YSFD T EG++ SY M+ + Sbjct: 121 EVRSYRQLPVRLYQVQTKFRDEIRPRFGLMRGREFMMKDGYSFDATAEGAEESYKIMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y+ IF RLGL+ + A++G IGG+ SHEF+VLADTGE + D ++ E Sbjct: 181 YMSIFSRLGLRFRAVEADTGSIGGNFSHEFMVLADTGEDTIAFCHDC-EYAANVERA 236 Score = 163 bits (412), Expect = 6e-38, Method: Composition-based stats. Identities = 75/184 (40%), Positives = 101/184 (54%), Gaps = 2/184 (1%) Query: 253 TAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A A +D+ D P + RGIEVGHIF G KYS M A F +GK+ Sbjct: 373 DAAVTAWADLRAITADDQCPRCGGRMELTRGIEVGHIFMLGLKYSEAMHAVFLDENGKER 432 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + MG YGIG RV AA IE +HD GI++P VAPF+ L+N+ + E+IYA Sbjct: 433 TMIMGCYGIGVSRVAAAAIEQNHDEHGIVFPPPVAPFECVLLNLDPRSEEVNAKVEEIYA 492 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L +G +V DD E+ G +F ADLLG P+Q++VG K + VE K R TG + ++S Sbjct: 493 LLQGMGIEVLLDDREERPGVKFKDADLLGIPMQLVVGGKGLGRGIVECKDRRTGEKGELS 552 Query: 431 LEEV 434 + Sbjct: 553 AASL 556 >gi|119899055|ref|YP_934268.1| prolyl-tRNA synthetase [Azoarcus sp. BH72] gi|152074747|sp|A1K976|SYP_AZOSB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|119671468|emb|CAL95381.1| unnamed protein product [Azoarcus sp. BH72] Length = 581 Score = 243 bits (619), Expect = 6e-62, Method: Composition-based stats. Identities = 131/259 (50%), Positives = 171/259 (66%), Gaps = 4/259 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++F+ L+E P DAE+ S KLMLR GMI + + GIY++LP+G K++ V IIREE Sbjct: 1 MRARQFFISTLKEAPADAEVVSQKLMLRAGMIRKVAAGIYNYLPMGLKSIRKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+++P +Q ++LW E+GR+D G EMLR DR+++ PT EEV+TDI R Sbjct: 61 MNRAGALELTMPLVQPSELWQETGRWDKMGPEMLRFKDRHERDFALQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP FYQIQ KFRDE RPRFGVMR REF MKDAYSFD + E + SY+ M+ + Sbjct: 121 ELKSYRQLPKNFYQIQTKFRDERRPRFGVMRGREFTMKDAYSFDRSAEAAGESYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL + A++G IGGD SHEF V+ADTGE + D N + Sbjct: 181 YSRIFDRLGLTYRAVAADTGAIGGDRSHEFQVIADTGEDAIVYCPDSSYAA----NIELA 236 Query: 241 DIISLNSIVEQWTAPYAAT 259 + +SL +AP A T Sbjct: 237 EALSLLPARAGASAPLAKT 255 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 70/188 (37%), Positives = 104/188 (55%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGH+FY GTKYS M+ATF DGK + +MG Sbjct: 393 VADIRNVVEGDPSPDGKGKLAIQRGIEVGHVFYLGTKYSKAMNATFLDVDGKPKHFEMGC 452 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R++ A IE +HD +GIIWP S+APF++ + + + + RD +K+Y L Sbjct: 453 YGIGVTRILGAAIEQNHDERGIIWPASIAPFEVVICPVGWSKSEAVRDEAQKLYDALVAA 512 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G FA +L+G P +V +G + + + E + R +++ E+ Sbjct: 513 GVDVILDDRDERPGVMFADWELIGVPHRVTIGDRGLKEGVAEYQGRRDPEASRVAVAEIA 572 Query: 436 NYASHRFS 443 + R Sbjct: 573 PHLISRLR 580 >gi|300772848|ref|ZP_07082717.1| threonine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861] gi|300759019|gb|EFK55846.1| threonine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861] Length = 641 Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats. Identities = 80/444 (18%), Positives = 151/444 (34%), Gaps = 36/444 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 + Y I + RD +L L + G+ WLP G + ++ Q Sbjct: 228 LTDYLKFIEEAKKRDHRKLGKELELFA-FSEKVGMGLPLWLPKGAALRQKLIDFMQRAQL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRS 120 + G + P + L+V SG Y+ YG++ + + P + +I+++ Sbjct: 287 KAGYEPVVTPHIGHKQLYVTSGHYEKYGEDSFQPIKTPVEGEEFFLKPMNCPHHCEIYKT 346 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SY++LP F + +R E G+ R R F DA+ F P+ K + K+ Sbjct: 347 KPRSYKDLPVRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCR-PDQVKEEFKKVID 405 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L +F LG + + D + D + Sbjct: 406 LVLYVFGALGFEDYIAQVSLR--------------DPENRTKYIGSDENWALAERAIIEA 451 Query: 240 DDIISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 D L ++VE A Y D + D+L ++ ++ F +Y+ Sbjct: 452 ADEKGLPTVVEYGEAAFYGPKLDFM---VKDALGRKWQLGTIQVDYNLPERFELEYTGSD 508 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 +A V + G++ AV+ G+ +W + + Sbjct: 509 NAK-------HRPVMIHRAPFGSLERFIAVLIEHCAGRFPLWLAPEQFIVLPV------S 555 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + + +K+ L+ D E++G + A++ P +IVG K V + Sbjct: 556 EKYEEYAQKLLESLNNSDIRGLIDLRDEKVGRKIRDAEVKKLPYMLIVGEKEAESGTVSV 615 Query: 419 KHRLTGIREDMSLEEVINYASHRF 442 + +G M+ EE Sbjct: 616 RKHGSGDVGSMTPEEFREVLIKEI 639 >gi|254489788|ref|ZP_05102983.1| threonyl-tRNA synthetase [Methylophaga thiooxidans DMS010] gi|224464873|gb|EEF81127.1| threonyl-tRNA synthetase [Methylophaga thiooxydans DMS010] Length = 673 Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats. Identities = 77/444 (17%), Positives = 150/444 (33%), Gaps = 41/444 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + G W G + L + A +R Q + G Sbjct: 242 YLHQMEEAEKRDHRRLGKQLDLF--HFQEEAPGSVFWHHKGWQILQELIAYLRRRQQQEG 299 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 IE++ P + LW SG + +Y M + + P + ++R ++ SY Sbjct: 300 YIEVNSPDVMDRSLWETSGHWQNYRDHMFTTETADGRFFALKPMNCPGSVLLYRQNLTSY 359 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R E G++R R F DA+ + T + L + Sbjct: 360 RDLPIRMSEFGKVHRYEPSGTLHGLLRVRHFTQDDAHIYC-TQSQMQDECMSAIRFILDV 418 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + +LG I ++ + P + E D + +++ Sbjct: 419 YDQLGFHDIKIKLSTRPEHRIGTDE-----------------TWDLLEETLIESLNELKL 461 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D++ + + +++ + Sbjct: 462 DYQTNPGEGAFYGPKLEF---VLQDAIKRDWQCGTLQVDMNLP--------ERFDLDYVD 510 Query: 305 ADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G K V + G++ ++ ++GK +W + I A Sbjct: 511 NNGLKQRPVMLHRALFGSLERFIGILLEHYEGKLPVW------LMPIQLVICAISDANAT 564 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E++ L G V D E+IG + L P + G K + + + I+ + Sbjct: 565 YVEQLATVLRYHGLRVSTDTRSEKIGYKIRQHTLQRIPYIAVAGDKEQASNTLSIRQQNG 624 Query: 424 GIREDMSLEEVINYASHRFSNNRP 447 +S++E IN S + +P Sbjct: 625 DTMGSLSIKETINTLSE--AAQKP 646 >gi|269216980|ref|ZP_06160834.1| threonine--tRNA ligase [Slackia exigua ATCC 700122] gi|269129787|gb|EEZ60871.1| threonine--tRNA ligase [Slackia exigua ATCC 700122] Length = 587 Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats. Identities = 76/438 (17%), Positives = 141/438 (32%), Gaps = 43/438 (9%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD ++ L M+ G WLP G + +++ + Q+ G ++ Sbjct: 189 EAEKRDHRRIGREMELF--MMADEGPGFPFWLPNGMRLKNSLMQYWMDMQDAYGYEQVDT 246 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + + LW SG +D Y + M + + + P + I++S +SYR+LP Sbjct: 247 PIILNKSLWETSGHWDHYKENMYT-TEIDGEEYAVKPMNCPGACLIYKSKPRSYRDLPLK 305 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + R EL+ G+ R R F DA+ + P+ + + G Sbjct: 306 LAEAGKDHRHELKGALHGLFRVRAFTQDDAH-LFIRPDQITEQVTDTAHLISTYYEQFGF 364 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + + P S E + + + + E Sbjct: 365 PY-RVELSTRPEDSMGSDE-----------------DWELAEAGLRAALEAMGVDYILNE 406 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D H L D L + ++ F + ADG Sbjct: 407 GDGAFYGPKIDFH---LQDCLGRTWQCGTIQLD----FQLPQ----NFELEYTDADGMKK 455 Query: 311 YV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + G G+ ++ + GK W + + + R+ +Y Sbjct: 456 RPIMIHRAGFGSFERFIGMLTEQYAGKFPTW------LSPCQVKVLPVSEKHREYARGVY 509 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLL-GFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 L G D+ E+IG + A + P +I+G K + + ++ R + + Sbjct: 510 DALRAAGIRAKLDERDEKIGYKIREARGIDRVPYMLILGEKEENAGNISVRDR-SNETVE 568 Query: 429 MSLEEVINYASHRFSNNR 446 L E I + R Sbjct: 569 RDLGEFIADVTAEIEERR 586 >gi|328954064|ref|YP_004371398.1| Prolyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] gi|328454388|gb|AEB10217.1| Prolyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] Length = 573 Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats. Identities = 123/237 (51%), Positives = 158/237 (66%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK LP L+E P +AE SH+L+LR GMI + + GIY +LPLG L V AI+REE Sbjct: 1 MYYSKMLLPTLKETPAEAETVSHQLLLRAGMIRKLTSGIYDYLPLGLMVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E+ +P +Q A+LW ESGR+ YGKE+LR DR+D+ +GPTHEEV+TD+ R Sbjct: 61 MNCAGAQELLLPAVQPAELWQESGRWQIYGKELLRFQDRHDRDYCFGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP YQIQ KFRDE+RPRFG++R REF+MKD YSFD+ G+ +Y M+ + Sbjct: 121 EVHSYRQLPLNLYQIQTKFRDEIRPRFGLIRGREFIMKDGYSFDIDEAGADQTYRAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R GL+ + A+SGPIGG SHEF+VLA+TGE V + E Sbjct: 181 YTRIFSRCGLRFKTVEADSGPIGGSFSHEFMVLAETGEDVVVSCTACA-YAANLEKA 236 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 2/188 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ D P RGIEVGH+F G KYS + ATF G++ Y+ MG Sbjct: 379 GFADLRQASNSDPCPRCGAALEFLRGIEVGHVFKLGYKYSKALKATFLDDQGREQYMFMG 438 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R+VAA IE +HD GII+P +APF++ L+ I A+D ++Y + Sbjct: 439 CYGIGVSRIVAAAIEQNHDLDGIIFPMPLAPFQVLLVPIAANDVDTMAVASRLYQEIRAA 498 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V +DD E+ G +F DLLG P++V++G K ++ E++ R + + + L ++ Sbjct: 499 GIEVLFDDRNERPGIKFKDGDLLGIPVRVVLGPKTLAQGAAEVRQRRSRAVQLIPLASLV 558 Query: 436 NYASHRFS 443 Y Sbjct: 559 AYLQDHIQ 566 >gi|157375257|ref|YP_001473857.1| threonyl-tRNA synthetase [Shewanella sediminis HAW-EB3] gi|189083624|sp|A8FV56|SYT_SHESH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157317631|gb|ABV36729.1| threonyl-tRNA synthetase [Shewanella sediminis HAW-EB3] Length = 642 Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats. Identities = 73/439 (16%), Positives = 141/439 (32%), Gaps = 40/439 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + + + G+ W G + IR++ + Sbjct: 233 LNRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWSLFLELEKFIRQKLGQYTY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M + ++ P + IF +KSYR Sbjct: 291 QEVKGPLMMDRVLWERSGHWDKYADAMFT-TNSENREYAIKPMNCPGHVQIFNQGLKSYR 349 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F T + + + + Sbjct: 350 DLPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHVFC-TEDQVQQEVSACIKMVYDTY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G K I ++ + P D D + Sbjct: 409 ETFGFKDIVVKLSTRPEKR-----------------IGDDDMWDRSEEALKQALTANGIA 451 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I+ A Y + L D L + ++ G AT+ Sbjct: 452 YEILPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDYALPGRLG--------ATYVAE 500 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D + +G++ ++ + GK W + +++ D Sbjct: 501 DNSRQTPVMIHRAILGSLERFLGILIEEYAGKFPTWLAPMQVVVMNIT------DKQSDY 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ + G D E+IG + L P ++VG + + + +V ++ R Sbjct: 555 VDEVVNIFKESGIRASKDLRNEKIGFKIREHTLRRVPYLLVVGDQEMDNKEVAVRTRDGV 614 Query: 425 IREDMSLEEVINYASHRFS 443 M +E+ + + + S Sbjct: 615 DLGKMRIEDFASKINEQIS 633 >gi|229823243|ref|ZP_04449312.1| hypothetical protein GCWU000282_00541 [Catonella morbi ATCC 51271] gi|229787409|gb|EEP23523.1| hypothetical protein GCWU000282_00541 [Catonella morbi ATCC 51271] Length = 647 Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats. Identities = 87/444 (19%), Positives = 170/444 (38%), Gaps = 36/444 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 FL + QE RD +L + M+ + G+ WLP G + I +++ Sbjct: 231 FLRLRQEAKERDHRKLGKELGIF--MVSKEVGSGLPFWLPKGATIRRVIERYIMDKEISL 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + DL+ SG + Y +M D D M + P + I+++ I Sbjct: 289 GYDHVYTPIMAKVDLYQTSGHWAHYKDDMFPPMDMGDGEMLVLRPMNCPHHMMIYKNDIH 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ + R E G+ R RE + DA+ F P+ K + ++ Sbjct: 349 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDAHIFVR-PDQIKEEFIRVLDLIK 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDD 241 ++H G+ R D + + D M + D+ Sbjct: 408 AVYHDFGITDYRFRLS--------------YRDPENKEKYFDDDAMWEKAQAMLKEAMDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y D+ + ++ + +S ++ F ++ T Sbjct: 454 LGLDYFEAIGEAAFYGPKLDI---QFKTAIGLEETMSTIQLD----FLLPERFD----LT 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + G DG+D++ + + G + + + + +P +AP +++L+ + + Sbjct: 503 YVGEDGQDNHRPVVIHR-GVVSTMERFVAYLIEEYKGAFPTWLAPVQVALLPVSL--EAH 559 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++IY L G V D E++G + A P Q+++G + VS+ V ++H Sbjct: 560 SDRVQEIYEDLKAKGFRVDMDLRNEKLGYKIRSAQTAKIPYQIVIGDQEVSEGTVNVRHY 619 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + E S ++ + S +N Sbjct: 620 GSAKSESYSYDDFVRLLSEDVANK 643 >gi|319400998|gb|EFV89217.1| threonyl-tRNA synthetase [Staphylococcus epidermidis FRI909] Length = 645 Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 151/444 (34%), Gaps = 31/444 (6%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD L L T G+ WLP G + I +++ Sbjct: 229 KAHLKMLEERRERDHRKIGKDLELFTNN-QLVGAGLPLWLPNGATIRREIERYIVDKEVS 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHI 122 G + P L + DL+ SG +D Y ++M ++ M+ P + I+++ Sbjct: 288 MGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPAMKLDEDEAMVLRPMNCPHHMMIYKNKP 347 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ R E ++ + + + P+ K + ++ Sbjct: 348 HSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQ 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G + R + D E + D++ Sbjct: 408 DVYKDFGFEDYRFRLS-----YRDPEDKHKYFDDDEM--------WEKAESMLKEASDEL 454 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y DV ++ ++ + + +S ++ F ++ T+ Sbjct: 455 GLTYEEAIGEAAFYGPKLDV---QVKTAMGKEETLSTAQLD----FLLPERFD----LTY 503 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG+ H + G+ + + + +I +N+ H Sbjct: 504 IGQDGEQHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPMQVEIIPVNVDLH----Y 559 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D + L G V DD E++G + A + P Q++VG K V + +V ++ Sbjct: 560 DYARLLQDELKSQGVRVEIDDRNEKMGYKIREAQMKKIPYQIVVGDKEVENQEVNVRKYG 619 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 + +E + +E I + Sbjct: 620 SEKQESVEKDEFIWNVIDEIRLKK 643 >gi|54293678|ref|YP_126093.1| prolyl-tRNA synthetase [Legionella pneumophila str. Lens] gi|81822437|sp|Q5WYK5|SYP_LEGPL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|53753510|emb|CAH14965.1| Prolyl-tRNA synthetase (Proline--tRNA ligase)(ProRS)(Global RNA synthesis factor) [Legionella pneumophila str. Lens] Length = 569 Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats. Identities = 136/393 (34%), Positives = 200/393 (50%), Gaps = 11/393 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FL +E P DAEIASH+LMLR+GMI + G+Y+W+PLG + L V I+REE Sbjct: 1 MRASQWFLVTQKETPNDAEIASHQLMLRSGMIRKLGSGLYTWMPLGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+T A+E+ +P++Q A+LW E+GR++++G ++L + D N + +GPTHEEV+TDI R+ Sbjct: 61 MNKTHAMELLMPSVQPAELWQETGRWETFGGQLLTMKDSNQREYCFGPTHEEVITDIMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L+ E + +Y M+ + Sbjct: 121 ELQSYKQLPVNFYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHLSLESLQETYKDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GLK + A++G IGG SHEF VLA++GE +F S + T Sbjct: 181 YCRIFDRMGLKYRAVEADTGAIGGSASHEFQVLAESGEDLIFYSDASDYAANIEQATSLK 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF------GTKY 294 + S E T +E + + I G G Sbjct: 241 PPKANQSCNETITLVDTPNKKTIDEVASFLGIASNQTIKTLIVKGKEHPMVALVLRGDDE 300 Query: 295 SLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + AT + ++ I +I + Sbjct: 301 LNEVKATKHPLVHSPLSFIDEELILKTLKTPLGSIGPVKLNIPVIVDHQALAMPSFVCGA 360 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 D+ +A + D +D + Sbjct: 361 NQADKHFINAAWE-----RDAKYDDAYDLRNVK 388 Score = 173 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 107/197 (54%), Gaps = 3/197 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A Y D+ N K D P+ + RGIEVGH+F G KY+ M+A+ G+ Sbjct: 373 ERDAKYDDAYDLRNVKEGDPSPDGRGTLHCCRGIEVGHVFQLGDKYAKAMNASVINEQGQ 432 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 + MG YG+G RVVAA IE HD GIIWP ++APF++++I + A ++ E Sbjct: 433 LQTMIMGCYGLGITRVVAAAIEQHHDEHGIIWPQALAPFQVNIIPLNGARSHAVKEQAES 492 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +Y +L G DV DD E+ G FA DL+G P +++V + + +E K R + + Sbjct: 493 LYQQLKSHGIDVLLDDRNERAGVLFADNDLIGIPHRLVVSERNLEQGCIEYKSRTSSETQ 552 Query: 428 DMSLEEVINYASHRFSN 444 ++L++V+N+ + Sbjct: 553 LINLDKVVNFIIELINK 569 >gi|256826891|ref|YP_003150850.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Cryptobacterium curtum DSM 15641] gi|256583034|gb|ACU94168.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Cryptobacterium curtum DSM 15641] Length = 586 Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats. Identities = 82/438 (18%), Positives = 146/438 (33%), Gaps = 43/438 (9%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD ++ L M+ G WLP G + + + E Q G ++ Sbjct: 189 EAEKRDHRKIGREMELF--MMADEGPGFPFWLPNGMRLKNALTQYWMEMQEAYGYEQVDT 246 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + S LW SG +D Y + M +D+ P + I++S +SYR+LP Sbjct: 247 PIILSRKLWETSGHWDHYKENMYT-TVIDDEDYAVKPMNCPGACLIYKSKPRSYRDLPLK 305 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + R EL+ G+ R R F DA+ + P+ + + G Sbjct: 306 LAEAGKDHRHELKGALHGLFRVRAFTQDDAH-LFIRPDQITEQVTDTAHLITAYYEQFGF 364 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + + P S E LA+ G + + ++ E Sbjct: 365 PY-RVELSTRPDDSMGSDEDWALAEEG-----------------LRQALEAMGVDYTLNE 406 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D H L D L + ++ F + +DG Sbjct: 407 GDGAFYGPKIDFH---LQDCLGRTWQCGTIQLD----FQLPQ----NFELEYTDSDGSKK 455 Query: 311 YVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + G G+ ++ + GK W + + + + R+ +I Sbjct: 456 RPILIHRAGFGSFERFIGMLTEQYAGKFPTWLSPLQVKVLPV------SEKHREYSRQIA 509 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVA-DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L + G V D+ E+IG + A + P +I+G + ++ R + Sbjct: 510 DKLRQAGVRVKVDERDEKIGYKIREARSVDRVPYMLILGEVEEEAGNISVRDR-SNETVQ 568 Query: 429 MSLEEVINYASHRFSNNR 446 SL++ I S R Sbjct: 569 RSLDDFITDIQAEISERR 586 >gi|169632514|ref|YP_001706250.1| prolyl-tRNA synthetase [Acinetobacter baumannii SDF] gi|226695258|sp|B0VRW9|SYP_ACIBS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|169151306|emb|CAP00010.1| prolyl-tRNA synthetase [Acinetobacter baumannii] Length = 571 Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats. Identities = 127/253 (50%), Positives = 172/253 (67%), Gaps = 1/253 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+Y+WLP+G + L V+AI+REE Sbjct: 1 MRTSRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGTRVLKKVDAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GA+E+ +P Q A LW ESGRY+ YG +LR DR+D + GPTHEEV+TD+ R+ Sbjct: 61 MNRSGAMEVFMPVTQPASLWEESGRYEQYGPGLLRFKDRHDNPFVLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +YN M+ + Sbjct: 121 ELKSYKQLPVNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHATQESLQETYNVMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P++A++G IGG SHEF VLA +GE + D+ E + Sbjct: 181 YSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLAASGEDDIAF-STESDYAANVEMAEAV 239 Query: 241 DIISLNSIVEQWT 253 + + +++ Sbjct: 240 LVGERAAPTQEFK 252 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 72/192 (37%), Positives = 103/192 (53%), Gaps = 3/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSAR--GIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A D+ N D P+ K GIEVGHIF GTKYS + G DGK Sbjct: 379 ERDAQITEVFDLRNVVEGDPSPDGKGTLQIKCGIEVGHIFQLGTKYSEALGCKVLGEDGK 438 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEK 367 V MG YGIG RVVAA IE ++D KGIIWP ++APF+I+++ + A +A E Sbjct: 439 PFTVTMGCYGIGVTRVVAAAIEQNYDDKGIIWPQAIAPFEIAIVPMNAHKSPRTLEAAEA 498 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +YA L G DV DD E+ G +F+ +L+G P ++++G K + E K R Sbjct: 499 LYAELQAQGFDVLLDDRNERPGVKFSDLELMGIPHRIVIGEKGLDAGTFEYKGRRDAEAS 558 Query: 428 DMSLEEVINYAS 439 +++ EE++ + Sbjct: 559 NLTKEELLAKLA 570 >gi|304413226|ref|ZP_07394699.1| Prolyl-tRNA synthetase [Candidatus Regiella insecticola LSR1] gi|304284069|gb|EFL92462.1| Prolyl-tRNA synthetase [Candidatus Regiella insecticola LSR1] Length = 597 Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats. Identities = 130/282 (46%), Positives = 175/282 (62%), Gaps = 4/282 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAE SHKLMLR GMI Q + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLATQKEIPADAESISHKLMLRAGMIQQVTSGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR+D YG E+LR DR+++ + GPTHEEV+T + R+ Sbjct: 61 MNNAGAIEVSMPMVQPADLWQESGRWDKYGLELLRFVDRHERHFVLGPTHEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP +QIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M + Sbjct: 121 QIKSYKQLPLNLFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQKTYDTMHAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+GL ++A++G IGG SHEF VLAD+GE + +F E Sbjct: 181 YSKIFSRIGLDFRAVQADTGSIGGSRSHEFQVLADSGEDDIVF-STTSNFAANIE---LA 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 ++ + T H + + D + + K + + Sbjct: 237 KAVAPTQSRAEATEALRIIDTPHVKTIADLVTQFKMPIEKTV 278 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 115/195 (58%), Gaps = 3/195 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N + D+ P+ + + RGIEVGHIF GT+YS M+AT + +GK + Sbjct: 385 PLPQVADIRNVVVGDASPDGQGTLLLKRGIEVGHIFQLGTQYSKIMNATIENKEGKKQAI 444 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYAR 371 MG YGIG R+VAA IE ++D GI+WP+++APF+++++ + H ++ E +Y Sbjct: 445 TMGCYGIGVSRIVAAAIEQNYDEDGILWPEAIAPFQVAILPMNMHKSFRVQEQAEALYKA 504 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 LS G +V DD E+ G F +L+G P +++ + + +VE K+R +G + + Sbjct: 505 LSDHGVEVILDDRCERPGVMFTDMELIGVPNSIVISERNHDNQEVEYKNRRSGETQMIKS 564 Query: 432 EEVINYASHRFSNNR 446 +++I++ + + +R Sbjct: 565 DKIIDFLIAQITKHR 579 >gi|62078861|ref|NP_001014086.1| probable prolyl-tRNA synthetase, mitochondrial precursor [Rattus norvegicus] gi|73919763|sp|Q5M7W7|SYPM_RAT RecName: Full=Probable prolyl-tRNA synthetase, mitochondrial; AltName: Full=Proline--tRNA ligase; Short=ProRS; Flags: Precursor gi|56789529|gb|AAH88403.1| Prolyl-tRNA synthetase 2, mitochondrial (putative) [Rattus norvegicus] gi|149035787|gb|EDL90468.1| rCG50302 [Rattus norvegicus] Length = 475 Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats. Identities = 147/454 (32%), Positives = 227/454 (50%), Gaps = 44/454 (9%) Query: 4 SKYFLPI-LQENP--------RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVN 54 S+ F P L+E+ D S +LML+ G+I S G Y +P +A++ + Sbjct: 43 SRMFQPQNLREDQVLSLEGRASDLTCKSQRLMLQVGLILPASPGCYHLMPYTVRAVEKLV 102 Query: 55 AIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM 114 +I +E G ++++P+L A+LW +GR+D G+E+LRL DR+ K GPTHEE + Sbjct: 103 RVIDQEMQAIGGQKINMPSLSPAELWRATGRWDLMGRELLRLKDRHGKEYCLGPTHEEAV 162 Query: 115 T-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 T + SY+ LP YQ+ KFRDE RPRFG++R REF MKD Y+FD + E ++ + Sbjct: 163 TALVASQKKLSYKQLPLLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSSEAAQET 222 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y+ + +Y R+F RLGL+ + RA+ G IGG +SHEF + D GE ++ Sbjct: 223 YSLVCDAYCRLFDRLGLRWMKARADVGSIGGTMSHEFQLPVDIGEDRLVVCPSC------ 276 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 A T V + + +GIEVGH FY GTK Sbjct: 277 --------------------HFSANTEIVDLSQKICPDCQGPLTETKGIEVGHTFYLGTK 316 Query: 294 YSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 YS +A F A G+ +MG YG+G R++AA IE I WP +AP+++ +I Sbjct: 317 YSSIFNAHFTNAHGESLLAEMGCYGLGVTRILAAAIEVLSTEDCIRWPSLLAPYQVCIIP 376 Query: 354 IKA--HDQVCRDACEKIYAR----LSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIV 406 K + + E++Y L ++ +V DD IG++ A+ LG+P +I Sbjct: 377 PKKGSKEAAATEIVERLYDDVTEALPQLRGEVLLDDRTHLTIGNRLKDANKLGYPFVIIA 436 Query: 407 GSKFVSDSK-VEIKHRLTGIREDMSLEEVINYAS 439 + + D E+ + TG ++ E V+ + Sbjct: 437 SKRALEDPAHFEVWSQNTGEVVFLTKEGVMELLT 470 >gi|281357061|ref|ZP_06243551.1| threonyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548] gi|281316619|gb|EFB00643.1| threonyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548] Length = 591 Score = 242 bits (618), Expect = 8e-62, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 147/443 (33%), Gaps = 40/443 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + RD +L L + G+ W P G +EE + G Sbjct: 184 YLKQQEEAAKRDHRKLGVELDLFS-FSDNVGPGLVLWHPKGAFIRHTFETFWKEEHYKNG 242 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + + LW SG Y M ++K P + ++++S ++SY Sbjct: 243 YELLYTPHIGQSVLWETSGHLSFYKDGMYSPMQIDEKDYYVKPMNCPFHIEVYQSRLRSY 302 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + ++ +R E G++R R F D++ TPE + ++ L I Sbjct: 303 RELPLRWAELGTVYRYEKSGALHGLLRVRGFTQDDSHIIC-TPEQIEDEIAEVLRFSLYI 361 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I + P + + + + S D + Sbjct: 362 WKSFGFTEIKPYLSTRP-----------------AKAVGEPERWEKALVSLRKAIDKLGL 404 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D+ K+ D++ + + + F ++ + T+ G Sbjct: 405 ECEVDEGGGAFYGPKIDL---KVKDAIGREWQTATIQFD----FNLPERFDM----TYIG 453 Query: 305 ADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DGK H M + R +IE + A Sbjct: 454 EDGKKHRPYMVHRALMGSLERFFGILIEQYAGAFPLWLAPEQARILPV-------SDRQH 506 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 DA + L G V D +G++ A P ++VG + +D + +++R Sbjct: 507 DAAMALKKELRLKGFRVEVDVKAASLGAKIKDARKERIPYMLVVGEREAADGTMAVRNRR 566 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 G M+L++++ N Sbjct: 567 EGELGTMTLDQLVEKMRFEVDNK 589 >gi|254456038|ref|ZP_05069467.1| threonyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211] gi|207083040|gb|EDZ60466.1| threonyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211] Length = 638 Score = 242 bits (618), Expect = 8e-62, Method: Composition-based stats. Identities = 79/439 (17%), Positives = 150/439 (34%), Gaps = 39/439 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD ++ L + S G W G + +R Q+ Sbjct: 231 EYLKRIEEAEKRDHRKLGKEMDLF--HFREESPGSVFWHEKGWALFQKLINYMRSRQDAA 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E++ P + LW +SG ++ YG+ M ++K P + +F +KS Sbjct: 289 GYREVNTPEILDRQLWEKSGHWEKYGENMYTSETPDEKVFAIKPMNCPGHIQVFNQGLKS 348 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + R E G++R R F DA+ F + + L Sbjct: 349 YRDLPIRIAEFGKVHRYEPSGALHGLLRVRAFTQDDAHIFCSEDQITSECLEVT-NLILD 407 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I+ LG +++ ++ P E D S Sbjct: 408 IYKDLGFENVILKYADRPEVRVGDDE-----------------IWDKAEASLLEAVKASK 450 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 SI + A Y + L D++ + + +++ A++ Sbjct: 451 LEYSINKGEGAFYGPKIEF---VLRDAIGRDWQCGTLQVDLNLPGRLD--------ASYV 499 Query: 304 GADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG V + G++ ++ + +P ++P + +I I + Sbjct: 500 DKDGTKKVPVMLHRALFGSLERFIGILI---ENYAGKFPFWISPLQTMVIPI---SEEFN 553 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D ++ ++ KVG D + + L P+ +I G K V + V I+ Sbjct: 554 DYAVEVSKKIKKVGISSAVDLKNNNLNYKIRDHSLAKIPVLLICGKKEVDSNSVTIRRLD 613 Query: 423 TGIREDMSLEEVINYASHR 441 + +E+M E+ + S Sbjct: 614 SNKQENMDTEQFLKTFSAL 632 >gi|114777677|ref|ZP_01452637.1| prolyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1] gi|114551893|gb|EAU54427.1| prolyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1] Length = 572 Score = 242 bits (618), Expect = 8e-62, Method: Composition-based stats. Identities = 115/237 (48%), Positives = 151/237 (63%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S F+P L++ P DAE+ SH+L+LR G I + + G+Y +LPL + L + AIIREE Sbjct: 1 MRYSNCFVPTLRDVPADAEVISHQLLLRAGYIRRVTSGVYDYLPLALRVLRRIEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA E+ +P +Q +LW +SGR YG E+LR DR+ GPTHEEV+ D+ Sbjct: 61 MERAGAQELLMPMVQPTELWEKSGRLAKYGPELLRFEDRHAHQSCLGPTHEEVICDLMSR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E Y MF + Sbjct: 121 ELRSYKQLPLNLYQIQNKFRDEIRPRFGLMRGREFVMKDAYSFHADDESLMAEYRNMFDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF RLGL+ P+ A++G IGG SHEF VLAD+GE V + ++ E Sbjct: 181 YTRIFDRLGLRFRPVEADTGSIGGSDSHEFHVLADSGE-DVIAHCESCEYAANVEKA 236 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 66/191 (34%), Positives = 104/191 (54%), Gaps = 4/191 (2%) Query: 257 AATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A D+ + D P +RGIEVG +F G +Y+ PM F+ GK M Sbjct: 379 AQLVDLRETRAGDGCPRCGGTIALSRGIEVGQVFALGRRYTEPMEVVFQNQQGKREVATM 438 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G YGIG R++AAV+E HD GI WPD +APF + L+++ D +A +IY +L Sbjct: 439 GCYGIGVSRLMAAVVEQCHDDGGIAWPDVLAPFPVILVSMGKSD-AVLEASGEIYKQLQT 497 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV WD+ E+ G +F A+L+G PLQ+++G + + + E R + R ++++ +V Sbjct: 498 AGIDVLWDERNERPGVKFKDAELIGIPLQIVIGDRGLKEGVAEFGRRGS-DRREVAIADV 556 Query: 435 INYASHRFSNN 445 + A+ +N Sbjct: 557 VAMATTELANR 567 >gi|301065031|ref|ZP_07205376.1| proline--tRNA ligase [delta proteobacterium NaphS2] gi|300440880|gb|EFK05300.1| proline--tRNA ligase [delta proteobacterium NaphS2] Length = 575 Score = 242 bits (618), Expect = 8e-62, Method: Composition-based stats. Identities = 130/267 (48%), Positives = 174/267 (65%), Gaps = 6/267 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S YF+P +E P DAEI SH+LM+R GMI + + GIY++LP+G K++ V I+REE Sbjct: 1 MRYSSYFIPTKKEIPADAEIISHQLMIRAGMIRKLTSGIYTYLPVGLKSIRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG+E+LR DR+D+ GPTHEEV+TD+ R Sbjct: 61 MNRAGAIEVLMPAVQPAELWQESGRWEYYGRELLRFKDRHDRDACMGPTHEEVITDLVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ +P YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ G+ SY M+ + Sbjct: 121 EIHSYKQMPINLYQIQTKFRDEIRPRFGIMRGREFIMKDAYSFDVDEAGANRSYEAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP------IPS 234 Y RIF R GLK + A+SG IGG SHEF+VLAD+GE Q+ + + Sbjct: 181 YERIFQRCGLKFRAVEADSGTIGGSYSHEFMVLADSGEDQIVNCATCSYAANLERAEVKA 240 Query: 235 ENTDFDDIISLNSIVEQWTAPYAATSD 261 E ++ +E+ P T D Sbjct: 241 EENMTPPDLNELMGLERVETPGQRTID 267 Score = 162 bits (411), Expect = 8e-38, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 102/192 (53%), Gaps = 6/192 (3%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ D P + RGIEVGH+F G KYS M A F GK+ + MG YG Sbjct: 384 DLRTIAEGDPCPRCGGAMSFGRGIEVGHVFKLGVKYSEAMKALFLNEQGKELPMIMGCYG 443 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R VAA IE +HD GI++P VAPF++S++ ++ H+ +A +KIY L K G D Sbjct: 444 IGIGRTVAAAIEQNHDENGIVFPIPVAPFEVSILPLQMHNDHVVNAADKIYEELMKSGID 503 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI--- 435 DD E+ G +F ADLLG P+++ VGS+ + + +VE+K R + L+ Sbjct: 504 ALLDDRDERAGVKFNDADLLGIPVRITVGSRGLKNGEVEVKLRSEAESFTVPLDNAAIAI 563 Query: 436 -NYASHRFSNNR 446 + + + Sbjct: 564 GKTVKDLYDSLK 575 >gi|307731045|ref|YP_003908269.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1003] gi|307585580|gb|ADN58978.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1003] Length = 578 Score = 242 bits (618), Expect = 8e-62, Method: Composition-based stats. Identities = 137/288 (47%), Positives = 181/288 (62%), Gaps = 5/288 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPIGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEKYGPELLRFKDRKQSDFVIGPTHEEVVTDIARG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD G + SY KM+ + Sbjct: 121 QIKSYRQLPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDAAGLRESYRKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD-- 238 Y+RIF RLGL + A++G IGG SHEF V+ADTGE + DF E + Sbjct: 181 YVRIFTRLGLDFRAVAADNGSIGGSGSHEFHVIADTGEDAIAYCPT-SDFAANVEAAEAL 239 Query: 239 --FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 + + + +++ P A + E L L + E Sbjct: 240 PLYAERAAPTEQLKKTPTPGKAKCEAVAELLNIPLERTIKSIVLATEN 287 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 71/192 (36%), Positives = 107/192 (55%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K V RGIEVGH+F GTKYS M+AT +GK + Sbjct: 382 PEPVVADIRNVKKGDPSPDGKGVLDICRGIEVGHVFQLGTKYSEAMNATCLDENGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 +MG YGIG R++ A IE + D KGIIWP+S+APF++ L + + R+ +K+Y + Sbjct: 442 EMGCYGIGITRILGAAIEQNFDEKGIIWPESIAPFEVVLCPMGYDRSEAVREQADKLYTQ 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD GE+ G FA +L+G P ++++G + + D K+E + R + + Sbjct: 502 LVDAGIDVILDDRGERPGVMFADWELIGVPHRLVIGDRGLKDGKLEYQGRRDAEATLLPV 561 Query: 432 EEVINYASHRFS 443 +E + Sbjct: 562 DEAAQAVIAKVR 573 >gi|189501972|ref|YP_001957689.1| threonyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2] gi|189497413|gb|ACE05960.1| hypothetical protein Aasi_0559 [Candidatus Amoebophilus asiaticus 5a2] Length = 644 Score = 242 bits (618), Expect = 8e-62, Method: Composition-based stats. Identities = 80/444 (18%), Positives = 155/444 (34%), Gaps = 37/444 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E R+ + +L L T + G+ WLP G + + +R Q + Sbjct: 233 KAYLELLEEAQKRNHQKIGKELKLFT-FSEKVGIGLPLWLPRGTVLREQLEQFLRRAQVK 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSH 121 G + P + +L++ SG YD YG++ + + P + +I++ Sbjct: 292 AGYQPVVTPHIGHKELYMTSGHYDKYGEDSFQPIRTPHEGEEFFLKPMNCPHHCEIYKHE 351 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SYR+LP + +R E G++R+R F DA+ F + + + K+ Sbjct: 352 PRSYRDLPVRLAEFGTVYRYEQHGELHGLVRTRGFTQDDAHIFCRNDQVREE-FAKVIDL 410 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 +F LG R + ++ D + Sbjct: 411 VTYVFSALGFSDYTARLS-------------FRDPEQLHKYIGDQEDWDKAEEAIEEVAK 457 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + A Y D + D+L N ++ ++ F Sbjct: 458 LRKLNTTKALGEAAFYGPKLDFM---VKDALGRNWQLGTVQLDYQLPVRFD--------L 506 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 ++ GAD K H + G++ A++ GK +W + I + Sbjct: 507 SYTGADNKKHRPVMIHRAPFGSLERFIAILLEHTAGKLPLW------LAPEQVAILPISE 560 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 E++ L F D E+IG + A+L P I+G K + V ++ Sbjct: 561 KFAAYAEEVNQNLRNKDIRCFIDHRDEKIGKKIREAELSKIPYMFIIGEKEQLERTVSVR 620 Query: 420 HRLTGIREDMSLEEVINYASHRFS 443 + G + +++++ S Sbjct: 621 KQGAGDQGSFPIDKLVQEIVEDIS 644 >gi|148360654|ref|YP_001251861.1| prolyl-tRNA synthase [Legionella pneumophila str. Corby] gi|296106282|ref|YP_003617982.1| prolyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy] gi|166980133|sp|A5IGL5|SYP_LEGPC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|148282427|gb|ABQ56515.1| prolyl-tRNA synthase [Legionella pneumophila str. Corby] gi|295648183|gb|ADG24030.1| prolyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy] Length = 569 Score = 242 bits (618), Expect = 8e-62, Method: Composition-based stats. Identities = 135/393 (34%), Positives = 200/393 (50%), Gaps = 11/393 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FL +E P DAEIASH+LMLR+GMI + G+Y+W+PLG + L V I+REE Sbjct: 1 MRASQWFLVTQKETPNDAEIASHQLMLRSGMIRKLGSGLYTWMPLGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+T A+E+ +P++Q A+LW E+GR++++G ++L + D N + +GPTHEEV+TDI R+ Sbjct: 61 MNKTHAMELLMPSVQPAELWQETGRWETFGGQLLTMKDSNQREYCFGPTHEEVITDIMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L+ E + +Y M+ + Sbjct: 121 ELQSYKQLPVNFYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHLSIESLQETYKDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GLK + A++G IGG SHEF VLA++GE +F S + T Sbjct: 181 YCRIFDRMGLKYRAVEADTGAIGGSASHEFQVLAESGEDLIFYSDASDYAANIEQATSLK 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF------GTKY 294 + + E T +E + + I G G Sbjct: 241 PPKANQACNETITLVDTPNQKTIDEVASFLGIASNQTIKTLIVKGKEHPMVALVLRGDDE 300 Query: 295 SLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + AT + ++ I +I + Sbjct: 301 LNEVKATKHPLVHSPLSFIDEELILKTLKTPLGSIGPIQLNIPVIVDHHALAMPSFVCGA 360 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 D+ +A + D +D + Sbjct: 361 NQADKHFINAAWE-----RDAKYDDAYDLRNVK 388 Score = 173 bits (438), Expect = 6e-41, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 106/197 (53%), Gaps = 3/197 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A Y D+ N K D P RGIEVGH+F G KY+ M+A+ G+ Sbjct: 373 ERDAKYDDAYDLRNVKEGDPSPDGRGMLHCCRGIEVGHVFQLGDKYAKAMNASVINEQGQ 432 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 + MG YG+G RVVAA IE HD GIIWP ++APF++++I + A Q ++ E Sbjct: 433 LQTMIMGCYGLGITRVVAAAIEQHHDEHGIIWPQALAPFQVNIIPLNGARSQTVKEQAES 492 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +Y +L G DV DD E+ G FA DL+G P +++V + + +E K R + + Sbjct: 493 LYQQLKSHGIDVLLDDRNERAGVLFADNDLIGIPHRLVVSERNLEQGCIEYKSRTSSETQ 552 Query: 428 DMSLEEVINYASHRFSN 444 ++L++V+N+ + Sbjct: 553 LINLDKVVNFIIELINK 569 >gi|296331396|ref|ZP_06873868.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676383|ref|YP_003868055.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] gi|296151511|gb|EFG92388.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414627|gb|ADM39746.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] Length = 638 Score = 242 bits (618), Expect = 8e-62, Method: Composition-based stats. Identities = 74/442 (16%), Positives = 145/442 (32%), Gaps = 44/442 (9%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E RD +L L M + + G+ +LP GQ + + RE Q + G Sbjct: 235 LHTLEEAAKRDHRKLGKQLELF--MFSEEAPGMPFYLPKGQIIRNELERFSRELQTKAGY 292 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + + LW +SG +D Y M ++ +D P + IF++ + SYR Sbjct: 293 EEVRTPFMMNQRLWEQSGHWDHYRDNM-YFSEVDDTRFAMKPMNCPGHMLIFKNSLYSYR 351 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R E G++R R F DA+ F + + + Sbjct: 352 DLPIRMAEFGQVHRHEYSGALNGMLRVRTFCQDDAHIFVREDQIESEIKEAIRLI----- 406 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + E+ V T + + +++ Sbjct: 407 --------------DEVYRTFGFEYSVELSTRPEDSLGDDSLWEASERALAYVLEELNLS 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + + A Y D H + D+L + + + ++ F K+ T+ Sbjct: 453 YEVNKGDGAFYGPKIDFH---IKDALKRSHQCATIQLD----FQMPEKFD----LTYINE 501 Query: 306 DGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + R +IE + V D Sbjct: 502 HNEKVRPVVIHRAVFGSIDRFFGILIEHFGGAFPVWLAPIQVQIIPV-------SHVHWD 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C K+ A L ++G D+ E++G + + + P +++G V ++ Sbjct: 555 YCRKVQAELKRLGIRARIDERNEKLGYKIRESQVQKIPYVLVLGDHEEQKDAVNVRQFGD 614 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + E + + + + N Sbjct: 615 QLIEHVPFQTFKDKLVKQVKNR 636 >gi|260463880|ref|ZP_05812076.1| threonyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075] gi|259030255|gb|EEW31535.1| threonyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075] Length = 658 Score = 242 bits (618), Expect = 8e-62, Method: Composition-based stats. Identities = 78/443 (17%), Positives = 149/443 (33%), Gaps = 39/443 (8%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + +L+E RD ++ L + G+ W G K N+ +R + G Sbjct: 235 YQTMLEEAEKRDHRKLGREMDLF--HFQEEGPGVVFWHAKGWKMFQNLVNYMRRRLDEQG 292 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIFRS 120 E++ P + LW SG + Y M ++ +D+ P + IF+ Sbjct: 293 YQEVNAPQVLDKSLWETSGHWGWYRDAMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKH 352 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R E G+MR R F DA+ F + + Sbjct: 353 GLKSYRDLPVKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQLAAECLRIN-D 411 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L + G + + ++ + P + E A+ M + + T Sbjct: 412 LILSTYADFGFEEVSVKLSTRPDKRVGTDEAWDHAEA----------IMGNVLETIRTRS 461 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + I SI A Y + L D++ + ++ FG Sbjct: 462 GNRIK-TSINPGEGAFYGPKFEY---VLKDAIGREWQCGTTQVDFNLPERFG-------- 509 Query: 300 ATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + G K V + G+M ++ ++ G +W + ++ Sbjct: 510 AFYIGSDSEKKQPVMVHRAICGSMERFLGILIENYSGHFPLWFAPLQVVVATIT------ 563 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 ++ A+L G D E+I + L P+ ++ G + + V I Sbjct: 564 SEADGYATEVVAKLKAAGLLAEADLRNEKINYKVREHSLAKVPVILVCGKREAEEQTVNI 623 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + ++ + L E I + Sbjct: 624 RRLGSRDQQSLGLAEAIAQLTEE 646 >gi|254496505|ref|ZP_05109377.1| prolyl-tRNA synthase [Legionella drancourtii LLAP12] gi|254354272|gb|EET12935.1| prolyl-tRNA synthase [Legionella drancourtii LLAP12] Length = 577 Score = 242 bits (618), Expect = 8e-62, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 169/235 (71%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FL L+E P DAEI SH+LMLRTGMI + G+Y+W+PLG K L V I+REE Sbjct: 9 MRASQWFLATLKETPNDAEIVSHQLMLRTGMIRKLGSGLYTWMPLGLKVLRKVEHIVREE 68 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR ++E+ +P +Q A+LW E+GR++++G ++L + D N + YGPTHEEV+TDI R+ Sbjct: 69 MNRINSVELLMPAVQPAELWQETGRWETFGGQLLTMKDSNGREYCYGPTHEEVITDIMRN 128 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L E +++Y M+ + Sbjct: 129 ELQSYKQLPRCFYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHLNLESLQNTYKDMYQA 188 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R+GLK + A++G IGG SHEF VLAD+GE +F S D+ E Sbjct: 189 YCRIFDRMGLKYRAVEADTGAIGGSASHEFQVLADSGEDLIFYSD-ASDYAANIE 242 Score = 164 bits (414), Expect = 4e-38, Method: Composition-based stats. Identities = 69/186 (37%), Positives = 100/186 (53%), Gaps = 3/186 (1%) Query: 261 DVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N K D P+ K S RGIEVGH+F G KY+ M+A G+ + MG YG Sbjct: 391 DLRNVKEGDISPDGKGTLHSCRGIEVGHVFQLGDKYAKAMNAAVINEQGQLETMMMGCYG 450 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGC 377 +G RVVAA IE HD +GIIWP ++APF++ +I + Q +D + +Y + G Sbjct: 451 LGITRVVAAAIEQHHDEQGIIWPSNIAPFQVVIIPLNGHKSQAVKDQADVLYKQFRNAGI 510 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 DV DD E+ G+ FA DL+G P +++V + + + VE K R TG + + L + Sbjct: 511 DVLLDDRNERAGALFADHDLIGVPHRLVVSDRNLEQNCVEYKSRATGETKSLDLNTAVAE 570 Query: 438 ASHRFS 443 S Sbjct: 571 IVSLVS 576 >gi|269467800|gb|EEZ79555.1| prolyl-tRNA synthetase [uncultured SUP05 cluster bacterium] Length = 560 Score = 242 bits (618), Expect = 8e-62, Method: Composition-based stats. Identities = 121/241 (50%), Positives = 164/241 (68%), Gaps = 1/241 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ + +P +E P DA+I SH+LM+R G+I + + G+YS+LP+G + L V AIIREE Sbjct: 1 MKTTNLLIPTQKEAPNDAQIISHQLMIRAGLISKLASGLYSYLPMGLRVLKKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GA E+ +P Q A+LW ESGR++ YG E+LR DR+++ GPTHEEV+T + Sbjct: 61 MNKSGAQEVLMPVAQPAELWQESGRWEQYGPELLRFNDRHNRKFCLGPTHEEVITHLAAQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I+SY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF L + +++ M + Sbjct: 121 YIRSYKQLPMNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHLDQNSLQQTFDVMHQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF+RLGL P+ A+SG IGGD S EF VLAD+GE + C D D+ E F Sbjct: 181 YCNIFNRLGLDYRPVLADSGSIGGDNSVEFHVLADSGEDAI-CFSDRSDYAANIEKVAFS 239 Query: 241 D 241 Sbjct: 240 K 240 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 68/194 (35%), Positives = 104/194 (53%), Gaps = 3/194 (1%) Query: 252 WTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 W +D+ N D P+ K + RGIEVGHIF GTKYS M A G GK Sbjct: 366 WQGIEFNEADLRNAVEGDVSPDGKGRLLIKRGIEVGHIFQLGTKYSQAMKANVIGESGKA 425 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKI 368 MG YGIG RV+AA IE +HD +GII+P+S+APF++ ++ I +D +++ Sbjct: 426 VTTTMGCYGIGVTRVIAASIEQNHDDRGIIFPESIAPFQVVIVPINYNKSTRVKDLADQL 485 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 Y + G +V DD E+ G FA ++LLG P ++++ + VE K R + + Sbjct: 486 YRQCLDAGIEVLLDDRKERAGIMFADSELLGIPHRMVLSDTHADNGNVEYKARNNPDKVE 545 Query: 429 MSLEEVINYASHRF 442 + +EV+++ + Sbjct: 546 VKFDEVLSFIQSKL 559 >gi|91762425|ref|ZP_01264390.1| Threonyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002] gi|91718227|gb|EAS84877.1| Threonyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002] Length = 638 Score = 242 bits (618), Expect = 8e-62, Method: Composition-based stats. Identities = 78/439 (17%), Positives = 146/439 (33%), Gaps = 39/439 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD ++ L + S G W G K + A +R Q + Sbjct: 231 EYLKRIEEAEKRDHRKLGKEMDLF--HFREESPGSVFWHEKGWKLFQKLVAYMRARQEKA 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E++ P + LW +SG ++ YG+ M ++K P + +F +KS Sbjct: 289 GYKEVNTPEILDRSLWEKSGHWEKYGEHMYTSQTPDEKIFAIKPMNCPGHVQVFNQGLKS 348 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + R E G++R R F DA+ F + + L Sbjct: 349 YRDLPLRISEFGKVHRYEPSGALHGLLRVRAFTQDDAHIFCTEDQITSECLIVT-NLILD 407 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I+ LG + + ++ P + D + Sbjct: 408 IYKDLGFEDVILKYSDRPDLR-----------------VGDDNVWDKAEKALLDAVKASK 450 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 +I + A Y + L D++ + + +++ A+F Sbjct: 451 LQYTINKGEGAFYGPKIEF---VLRDAIGRDWQCGTLQVDLNLPGRLD--------ASFV 499 Query: 304 GADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG K V + G++ ++ ++ GK W + + Sbjct: 500 DKDGTKKIPVMLHRALFGSLERFIGILIENYAGKFPFW------IAPLQAVVIPISEEFD 553 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++ +++ G D + + L PL +I G K V + V I+ Sbjct: 554 TYAKEVNEKINNAGISSEVDLKNHNLNYKIREHSLSKIPLLLICGKKEVDSNSVTIRRLD 613 Query: 423 TGIREDMSLEEVINYASHR 441 T +E+M L + S Sbjct: 614 TNKQENMELNLFLETFSAL 632 >gi|85709956|ref|ZP_01041021.1| threonyl-tRNA synthetase [Erythrobacter sp. NAP1] gi|85688666|gb|EAQ28670.1| threonyl-tRNA synthetase [Erythrobacter sp. NAP1] Length = 671 Score = 242 bits (618), Expect = 8e-62, Method: Composition-based stats. Identities = 84/460 (18%), Positives = 150/460 (32%), Gaps = 54/460 (11%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ L L+E RD ++ L + + + G W P G + + A +R + Sbjct: 236 KQLNAHLHRLEEAAKRDHRKLGREMDLF--HLQEEAHGSVFWHPKGYRIWRELEAYMRRK 293 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADR------------------NDK 102 + G E+ P L W +SG + Y + M + D + Sbjct: 294 MDGGGYREIKTPQLMDVRQWTQSGHWGKYAENMFAVPDIVPDVDDSGEAEASPKVADDAD 353 Query: 103 AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAY 161 M P + +F+ I SYR+LP ++ R+E G+MR R+F DA+ Sbjct: 354 WMAIKPMNCPAHVLVFKQGITSYRDLPIRLGEMGCCHRNEPHGALHGLMRVRQFTQDDAH 413 Query: 162 SFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV 221 F + + + F + +R S ++ P S E A+ Sbjct: 414 IFCTEDQVVEE--VRKFCALADSVYRDFGFSYHVKLALRPEKRFGSEEDWDKAEQELRDA 471 Query: 222 FCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARG 281 + E + A YA + H L D++ +V Sbjct: 472 VAEAGMDNEEYGWEE------------LPGEGAFYAPKLEWH---LTDAIGRTWQVGTIQ 516 Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIW 340 + AT+ G DG+ H + G+ ++ G+ W Sbjct: 517 GDRVLPDRLD--------ATYVGEDGEKHRPVMLHRAIFGSYERFIGILIEHFAGRLPSW 568 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 V +++ D + A+L G V D E+I + L Sbjct: 569 LAPVQAVVATIV------SDADDYANEATAKLQAAGIRVESDLRNEKINYKVREHSLAKV 622 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 P ++VG + + V ++ + MSL+E I Sbjct: 623 PHLLVVGKREAEEGTVAVRTLGEKEQRVMSLDEAIAMLRD 662 >gi|323142328|ref|ZP_08077160.1| proline--tRNA ligase [Phascolarctobacterium sp. YIT 12067] gi|322413212|gb|EFY04099.1| proline--tRNA ligase [Phascolarctobacterium sp. YIT 12067] Length = 569 Score = 242 bits (618), Expect = 9e-62, Method: Composition-based stats. Identities = 123/361 (34%), Positives = 186/361 (51%), Gaps = 10/361 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + P L+E P +AEI SH+L+LR G + + + G+Y++LPL + + + IIREE Sbjct: 1 MKVSKMYAPTLREVPSEAEIPSHQLLLRAGFMRKSTNGMYTYLPLAWRVIKKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P +Q A++W ESGR+D+YG EM+RL DR+ GPTHEE++T + ++ Sbjct: 61 MDHAGCQEIMMPIMQPAEIWKESGRWDAYGAEMVRLKDRHGHEYCLGPTHEEMVTTLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE RPRFG+MRSR+F+MKD YSFD G SY M+ + Sbjct: 121 DVRSYRQLPLNLYQIQDKFRDERRPRFGLMRSRDFIMKDGYSFDRDEAGLDVSYKAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R GL P+ A+SG IGG SHEF+VLAD+GE ++ D+ E + Sbjct: 181 YDKIFTRCGLNFRPVEADSGAIGGTGSHEFMVLADSGEAEITYCTKC-DYAADIEKAELY 239 Query: 241 DIISLNSIVEQWT---APYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I + +++ + P T L + ++ + A E G + F Sbjct: 240 PIKAPAEEMQELSEVETPNCKTIADVCAFLNAPIEKSVKAVAYQCEKGLVLCFVRGDHEV 299 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + G + + V + + + H Sbjct: 300 NETKVQNTVGAVELEMAEAELLAKAGTVGGYMG------PVGLDPEKVIIVCDATVMNMH 353 Query: 358 D 358 + Sbjct: 354 N 354 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 73/233 (31%), Positives = 114/233 (48%), Gaps = 4/233 (1%) Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 D + + C M+ + + +N+ + P +D+ D P Sbjct: 337 DPEKVIIVCDATVMNMHNVCCGANHEGFHYINANPGRDFTP-TYVADIRLMAEGDPCPHC 395 Query: 275 KRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 A RGIE G +F TKYS M T+ +GK+ + MG YGIG R +AA +E S Sbjct: 396 GAPIAKARGIEAGQVFKLHTKYSAAMKCTYLDENGKEQPMVMGCYGIGVGRTMAACVEQS 455 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 HD G+IWP ++AP+++ ++ + D+ EKIY L K G +V DD E+ G +F Sbjct: 456 HDADGMIWPVAIAPYEVLVVPVNVKDEASFAKAEKIYNELHKAGVEVVIDDRKERPGVKF 515 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE-EVINYASHRFSN 444 ADL+G+PL+V+VG K + ++E+K R TG + L+ + I Sbjct: 516 KDADLIGYPLRVVVGPKTLQTGELEVKVRKTGEVSMLPLDGDYITAIKEMLQK 568 >gi|172054921|ref|YP_001806248.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142] gi|171701202|gb|ACB54182.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142] Length = 644 Score = 242 bits (618), Expect = 9e-62, Method: Composition-based stats. Identities = 83/442 (18%), Positives = 158/442 (35%), Gaps = 39/442 (8%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +L +E R D +L L + I + G+ W P G + R+ Sbjct: 236 YLQQQEEAKRRDHRKLGKELKLFS--IQENAGGGLVFWHPRGATMRYLIEDYWRKAHLDG 293 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + + +LW SG +D Y + M D ++A P + +++ + S Sbjct: 294 GYELLYTPHVANLELWKTSGHFDFYRENMFDSMDIEEQAYQIKPMNCPFHVLTYKNDLHS 353 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR P + ++ +R E G+MR R F DA+ F L + + + + Sbjct: 354 YREFPLRWAELGTVYRYERSGVLHGLMRVRGFTQDDAHIFCLPTQIASE-ILGVLNLTEK 412 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I G K + + P + E + + + Sbjct: 413 ILSDFGFKDYEVNLSTRPEKSVGTDE-----------------GWELATQALVEALNSKS 455 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y D+ K+ D++ + S ++ F ++ + A Sbjct: 456 WEYIEDKGGGAFYGPKIDI---KIKDAIGRTWQCSTIQVD----FNLPERFDMEYVAA-- 506 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + G++ ++ + +P +AP ++ L+ + + R+ Sbjct: 507 -DGSRQRPIMIHRAIFGSLERFYGILI---ENYAGDFPLWLAPIQLRLLPV---SEAQRE 559 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E + A L + G V D GE++G Q A+L P+ IVG+K V + I+ R Sbjct: 560 YGEAVVATLKEAGYRVEIDCTGERLGKQIRNAELEKIPVVAIVGNKEVETQSLSIRTRQQ 619 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G M L E+ +N Sbjct: 620 GDIGTMDLTELKKSLDDAIANK 641 >gi|114563918|ref|YP_751432.1| prolyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400] gi|122299171|sp|Q07ZH1|SYP_SHEFN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114335211|gb|ABI72593.1| prolyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400] Length = 571 Score = 242 bits (617), Expect = 9e-62, Method: Composition-based stats. Identities = 124/237 (52%), Positives = 166/237 (70%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+Y+WLP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYTWLPSGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+TGAIE+ +P +Q ADLWVE+GR+D +G E+LR DRN++ + GPTHEEV+TD+ R Sbjct: 61 MNKTGAIEILMPLVQPADLWVETGRWDKFGPELLRFQDRNNRDFVLGPTHEEVITDLVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP T YQ+Q KFRDE+RPRFGVMR+REFLMKDAYSF L E ++Y+ M + Sbjct: 121 ELSSYKQLPLTLYQVQTKFRDEVRPRFGVMRAREFLMKDAYSFHLDQETMDNTYHAMHTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y I R+GL P+ A++G IGG +SHEF VLA++GE + D+ E Sbjct: 181 YSNILTRMGLSFRPVLADTGSIGGSMSHEFHVLANSGEDLIAY-STGSDYAANIEKA 236 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 68/189 (35%), Positives = 107/189 (56%), Gaps = 3/189 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N + P+ ARGIEVGHIF GT YS M+AT +GK + Sbjct: 379 PLATAADIRNVVEGEPTPDGLGTYAMARGIEVGHIFQLGTSYSKSMNATVLDENGKAQVL 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYAR 371 MG YG+G R+VAA IE ++D +GI WP+++APF + ++ + D EK+Y Sbjct: 439 LMGCYGVGVSRIVAAAIEQNNDDRGITWPEAIAPFTVGILPMNMHKSHRVADIAEKLYQD 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G +V DD E+ G FA +L+G P V++G + + E K+R TG ++D+ Sbjct: 499 LADAGVEVLMDDRKERPGVMFADMELIGLPHVVVIGDRNIDAGVFEYKNRRTGEKQDIPF 558 Query: 432 EEVINYASH 440 +E++ + ++ Sbjct: 559 DEIVAFLTN 567 >gi|212635267|ref|YP_002311792.1| threonyl-tRNA synthetase [Shewanella piezotolerans WP3] gi|226701407|sp|B8CME8|SYT_SHEPW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|212556751|gb|ACJ29205.1| Threonyl-tRNA synthetase, class IIa [Shewanella piezotolerans WP3] Length = 642 Score = 242 bits (617), Expect = 9e-62, Method: Composition-based stats. Identities = 73/439 (16%), Positives = 138/439 (31%), Gaps = 40/439 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + + + G+ W G + IR++ + Sbjct: 233 LNRLEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHNDGWSLFLELEKFIRQKLGQYTY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG +D Y M + + P + IF +KSYR Sbjct: 291 QEVKGPLMMDRVLWERSGHWDKYADGMFT-TNSESREYAIKPMNCPGHVQIFNQGLKSYR 349 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F + + + + Sbjct: 350 DLPLRMAEFGCCHRNEPSGSLHGLMRVRGFTQDDAHVFCTEEQVQQE-VSACIQMVYDTY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G K+I ++ + P D D + Sbjct: 409 ETFGFKNIVVKLSTRPEKR-----------------IGDDDMWDRAEEALKQALKSNDIE 451 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I+ A Y + L D L + ++ G AT+ Sbjct: 452 FEILPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDYALPGRLG--------ATYVAE 500 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D + +G++ ++ + GK W +++ D Sbjct: 501 DNSRQTPVMIHRAILGSLERFLGILIEEYAGKFPTWLAPQQVVVMNIT------DKQSDY 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++ + G D E+IG + L P ++VG + + + +V ++ R Sbjct: 555 AEEVVNLFKEHGIRATKDLRNEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRTREGV 614 Query: 425 IREDMSLEEVINYASHRFS 443 M ++E ++ S Sbjct: 615 DLGKMQIQEFATKLKNQIS 633 >gi|167752344|ref|ZP_02424471.1| hypothetical protein ALIPUT_00588 [Alistipes putredinis DSM 17216] gi|167660585|gb|EDS04715.1| hypothetical protein ALIPUT_00588 [Alistipes putredinis DSM 17216] Length = 651 Score = 242 bits (617), Expect = 9e-62, Method: Composition-based stats. Identities = 95/451 (21%), Positives = 164/451 (36%), Gaps = 42/451 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L + +G+ WLP G D + +R Q Sbjct: 229 EYLAMMEEAKKRDHRKLGKELELF-CFSQRVGQGLPLWLPKGAALRDRLEQFLRGVQKEY 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRN--DKAMIYGPTHEEVMTDIFRSHI 122 G ++ P + + +L+V SG Y YGK+ + + + P + +I+RS Sbjct: 288 GYQQVITPHIGNKELYVTSGHYAKYGKDSFQPIHTPIEGEEYLLKPMNCPHHCEIYRSKP 347 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY+ LP + +R E G+ R R F DA+ F + + + K+ Sbjct: 348 RSYKELPVRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHMFVRPDQLLEE-FEKVIDIV 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L IF L + + D + + D S Sbjct: 407 LYIFKTLKFDNYTAQISLR--------------DPNNKEKYIGSDENWEKAESAIIQAAK 452 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 LN+++E A Y D + D++ ++ ++ Sbjct: 453 EKGLNTVIEYGEAAFYGPKLDFM---VRDAIGRKWQLGTIQVDYNLP--------ERFDL 501 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 T+KGAD K H + G+M AV+ GK +W + + + Sbjct: 502 TYKGADDKMHRPIMIHRAPFGSMERFVAVLLEHTGGKFPLW------LSPDQVVVLPISE 555 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D EK+ A L+K DD E+IG + +L P +IVG K ++ V ++ Sbjct: 556 KFNDYAEKVSAYLNKYDIRSQVDDRNEKIGRKIRDNELKRIPYLLIVGEKEEAEGLVSVR 615 Query: 420 HRLTGIREDMSLEEVINY----ASHRFSNNR 446 + G + M+LE +Y SH N+ Sbjct: 616 AQGEGDKGQMTLEAFRDYMTDLVSHEIDANK 646 >gi|258405882|ref|YP_003198624.1| prolyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692] gi|257798109|gb|ACV69046.1| prolyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692] Length = 579 Score = 242 bits (617), Expect = 9e-62, Method: Composition-based stats. Identities = 128/279 (45%), Positives = 172/279 (61%), Gaps = 2/279 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S ++P L+E P +AE+ SHKL++R GMI + + GIY++LPLG +ALD + ++REE Sbjct: 1 MRLSNAYIPTLKEEPAEAEVVSHKLLVRAGMIRKVTSGIYTFLPLGLRALDKIAHVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR G E+ +P +Q DLW E+GR++ YGKE+LRL DR+D+ GPTHEEV+T + R Sbjct: 61 MNRAGCQEIFMPMVQPGDLWKETGRWEYYGKELLRLKDRHDRDYCLGPTHEEVVTSLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD G++ SY MF + Sbjct: 121 EVRSYRQLPLNLYQIQTKFRDEIRPRFGLMRCREFIMKDAYSFDRDEAGAQKSYQTMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP--IPSENTD 238 Y R F RLGL+ + A+SG IGG +SHEF+VLA TGE + +E Sbjct: 181 YTRAFQRLGLQFRAVEADSGAIGGSVSHEFMVLAATGEDTIASCAACEFAANLEKAEVVV 240 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV 277 D E P V F + ++ V Sbjct: 241 PTDHPVGLCEAEASEVPTPGKHTVDEVATFLGVGADRIV 279 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 74/192 (38%), Positives = 111/192 (57%), Gaps = 2/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 Q A A +D+ + D P + +GIEVGH+F GTKYS PM A + +GK Sbjct: 373 QRDAAITAYADLRDVTSGDPCPRCGGELRFPQGIEVGHVFNLGTKYSAPMQALYLDENGK 432 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + + MG YGIG R++AA IE +HD GI++P S+AP++I+L+ + ++ R E Sbjct: 433 EREMVMGCYGIGVSRILAAAIEQNHDASGIMFPPSIAPYEIALLCLDTKNEEVRTKAEAF 492 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 Y L + G DV +DD E+ G +F ADL+G PLQV+ G K V+ VE+K R TG + + Sbjct: 493 YETLQEQGVDVLYDDRVERPGFKFKDADLMGLPLQVVFGGKGVARGIVEVKDRRTGEKAE 552 Query: 429 MSLEEVINYASH 440 + L+ + + Sbjct: 553 LPLDGLAEAFAS 564 >gi|291280439|ref|YP_003497274.1| prolyl-tRNA synthetase [Deferribacter desulfuricans SSM1] gi|290755141|dbj|BAI81518.1| prolyl-tRNA synthetase [Deferribacter desulfuricans SSM1] Length = 573 Score = 242 bits (617), Expect = 9e-62, Method: Composition-based stats. Identities = 130/282 (46%), Positives = 179/282 (63%), Gaps = 1/282 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLP L+E+P +AE+ SHK MLR GMI + + GIY++LP G K + V I+R+ Sbjct: 1 MRLSQYFLPTLREDPSEAEVVSHKFMLRAGMIRKVAAGIYNYLPAGLKVIKKVENIVRKY 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P + A+LW+ESGR++ YGKE+LRL DR+D+ GPTHEEV+TDI R+ Sbjct: 61 MNEAGAIELLMPAVVPAELWIESGRWNVYGKELLRLKDRHDRDFCIGPTHEEVVTDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ EG++ SY M+ + Sbjct: 121 EVKSYKQLPLNLYQIQTKFRDEVRPRFGLMRGREFIMKDAYSFDVDDEGAEKSYMLMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF GL+ + + A+SG IGG+ SHEF+V ADTGE V + DF E Sbjct: 181 YCKIFEACGLEYVVVEADSGAIGGNFSHEFMVTADTGEDFVISCTNC-DFAANIEKAPIL 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 D ++ + + + D L + + Sbjct: 240 DEGVVSDEPLKEPEIVTTKNIKKVVDVADYLGIPPHKHVKTL 281 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 75/234 (32%), Positives = 115/234 (49%), Gaps = 10/234 (4%) Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 + ++ K+F+ + + + + V+ + D N D K Sbjct: 343 YADYEIKYMKNFVLGVNEKDKHQINSNLGRDFEVDGFG-------DFRNAVPGDKCARCK 395 Query: 276 R---VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 + +GIEVGHIF GTKYS M+A + DGK + MG YGIG R AA IE + Sbjct: 396 KGEYKITKGIEVGHIFKLGTKYSKAMNAYYLDKDGKQKLMVMGCYGIGIGRTAAAAIEQN 455 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 HD KGIIWP +APF++ ++ I + + + E +Y +L DV DD E+ G +F Sbjct: 456 HDEKGIIWPVQIAPFEVVIVPINTNSEDVVNLSETLYLKLKNNNVDVLIDDRDERAGVKF 515 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 ADL+G+PL++ VG+K ++ VEI R T ++ E+ I + R Sbjct: 516 NDADLVGYPLRINVGAKALAKGNVEIFIRKTKETVEVKKEDAIAKTMQLLDDLR 569 >gi|115315107|ref|YP_763830.1| threonine--tRNA ligase [Francisella tularensis subsp. holarctica OSU18] gi|122324891|sp|Q0BL41|SYT_FRATO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|115130006|gb|ABI83193.1| threonine--tRNA ligase [Francisella tularensis subsp. holarctica OSU18] Length = 634 Score = 242 bits (617), Expect = 9e-62, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 143/442 (32%), Gaps = 41/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD L L + S GI W G + V +R N+ G Sbjct: 230 YLNMLEEAEKRDHRKIGKVLDLF--HFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG Y + M ++ P + ++ + + SY Sbjct: 288 CSEIRTPLIADFSLWQKSGHASKYAENMF-ATKSENRDFAIRPMNCPTCVQVYNTKLHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F + + + + Sbjct: 347 RDLPIRMAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEV- 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++ P E D D Sbjct: 406 YKDFGFNDFAVKIALRPENRIGDDE-----------------TWDKSEQILKNALDANNV 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + H L D++ + + ++ G AT+ Sbjct: 449 SYELFPGEGAFYGPKIEFH---LKDAIGRSWQCGTIQLDFSMPQRLG--------ATYID 497 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G+ V + +G++ ++ + G +W V + + N D Sbjct: 498 KNGEKQVSVMLHRAIVGSLERFIGMLIEHYAGNLPLWLAPVQVAVMGISN------NQDD 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C++++ L K G D E+IG + LL P VI+G + I+ Sbjct: 552 YCKEVFIMLEKNGIRAKLDLRNEKIGFKIREHTLLRVPYLVILGKNEQEQKIITIRKHSG 611 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS+++ + + Sbjct: 612 EDLGQMSVDDFCAFLDKQIQAK 633 >gi|89256700|ref|YP_514062.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica LVS] gi|156502860|ref|YP_001428925.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010452|ref|ZP_02275383.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica FSC200] gi|254368007|ref|ZP_04984027.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica 257] gi|290954131|ref|ZP_06558752.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica URFT1] gi|295312449|ref|ZP_06803221.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica URFT1] gi|122999730|sp|Q2A2J0|SYT_FRATH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166223341|sp|A7NDB6|SYT_FRATF RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|89144531|emb|CAJ79846.1| Threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica LVS] gi|134253817|gb|EBA52911.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica 257] gi|156253463|gb|ABU61969.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 634 Score = 242 bits (617), Expect = 9e-62, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 143/442 (32%), Gaps = 41/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD L L + S GI W G + V +R N+ G Sbjct: 230 YLNMLEEAEKRDHRKIGKVLDLF--HFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG Y + M ++ P + ++ + + SY Sbjct: 288 CSEIRTPLIADFSLWQKSGHASKYAENMF-ATKSENRDFAIRPMNCPTCVQVYNTKLHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F + + + + Sbjct: 347 RDLPIRMAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEV- 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++ P E D D Sbjct: 406 YKDFGFNDFAVKIALRPENRIGDDE-----------------TWDKSEQILKNALDANNV 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + H L D++ + + ++ G AT+ Sbjct: 449 SYELFPGEGAFYGPKIEFH---LKDAIGRSWQCGTIQLDFSMPQRLG--------ATYID 497 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G+ V + +G++ ++ + G +W V + + N D Sbjct: 498 KNGEKQVSVMLHRAIVGSLERFIGMLIEHYAGNLPLWLAPVQVAVMGISN------NQDD 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C++++ L K G D E+IG + LL P VI+G + I+ Sbjct: 552 YCKEVFIMLEKNGIRAKLDLRNEKIGFKIREHTLLRVPYLVILGKNEQEQKIITIRKHSG 611 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS+++ + + Sbjct: 612 EDLGQMSVDDFCAFLDKQIQAK 633 >gi|160880797|ref|YP_001559765.1| threonyl-tRNA synthetase [Clostridium phytofermentans ISDg] gi|160429463|gb|ABX43026.1| threonyl-tRNA synthetase [Clostridium phytofermentans ISDg] Length = 584 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 87/438 (19%), Positives = 162/438 (36%), Gaps = 42/438 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +E RD +L L T M + G +LP G + + R+ R G Sbjct: 184 YLKQQEEAKLRDHRKLGKELELFTFM--EEGPGFPFFLPKGMVIKNLLLDYWRKLHEREG 241 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+S P + + +LW SG +D Y + M +D+ P + ++ S +SY Sbjct: 242 YVEISTPMMLNRNLWETSGHWDHYKENM-YQTKIDDEIYAIKPMNCPGGMLVYGSKPRSY 300 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 + LP F ++ L R E + G+MR R F DA+ +T E K + + Sbjct: 301 KELPLRFGELGLVHRHEKSGQLHGLMRVRCFTQDDAH-LFMTEEQIKDEIKGVVRLIDEV 359 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + + P S E + + +++ Sbjct: 360 YKKFGFTY-HVELSTRPENSIGSLE-----------------DWEIATDALKMALEEMEL 401 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D H L DS+ + + ++ F ++ + G Sbjct: 402 PYLINEGDGAFYGPKIDFH---LKDSIGRTWQCGSIQLD----FQLPLRF----GIEYIG 450 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + G++ ++ + G+ W V +++ + D Sbjct: 451 ADGEAHRPIMIHRVIFGSIERFFGILIEHYAGRFPTWLAPVQVKILTV------SEQFND 504 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + I L + G V D E++G + A L P +I+G + + +V + +R Sbjct: 505 YAQDILMELKQQGIRVSLDSRSEKLGYKVREARLDKIPYVLIIGQMEMENKQVSVWNREE 564 Query: 424 GIREDMSLEEVINYASHR 441 G +E++I+ Sbjct: 565 GDLGGYVVEDLISLIKKE 582 >gi|297565426|ref|YP_003684398.1| threonyl-tRNA synthetase [Meiothermus silvanus DSM 9946] gi|296849875|gb|ADH62890.1| threonyl-tRNA synthetase [Meiothermus silvanus DSM 9946] Length = 652 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 74/443 (16%), Positives = 144/443 (32%), Gaps = 33/443 (7%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + RD +L L T + + KG+ WLP G + + E++ G Sbjct: 241 YLWRQEEAKKRDHRKLGAELELFT-ISEEVGKGLPLWLPKGAFIRKQLEQYMYEKEQEYG 299 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + S+ L+ SG Y +M + + P + I+++ ++SY Sbjct: 300 YDYVITPHIASSKLYYTSGHLPYYKDDMYAPIEIEGEEYYLKPMNCPHHHMIYKARLRSY 359 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + +R EL G+ R R F DA+ + + + + + + Sbjct: 360 RDLPLRLAEFGTVYRFELSGTLSGLARVRGFTQNDAHIYCSKSQVTDEFIK-VIQLFDEV 418 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G+ R + + D I + + + Sbjct: 419 YKDFGISDYWFRLSLPDF------------ENNPEKFGQPGPHWDEAIAAIRAALEQTGA 466 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 Y DV + L + + ++ ++ FG F Sbjct: 467 QFVEGIGEATFYGPKLDVQIRSV---LGKEESIATNQLDFISGQRFG--------LEFTN 515 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 G+ V + +G+ A G +W I + Sbjct: 516 EKGEKEVPVIIHRAIMGSFDRFFAFYLEHTAGNFPLW------LSPIQAVIVPIADRHLE 569 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +I + V DD E++ ++ A+L PL ++VG K + + ++ R Sbjct: 570 YARQIAQAMKAAKLRVEVDDRPERMNAKIRDAELQKIPLILVVGDKEQEEGTINLRERQA 629 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 + + LEE+I R N + Sbjct: 630 KAQRTLKLEELIGEMQERVRNRK 652 >gi|126658692|ref|ZP_01729837.1| Threonyl-tRNA synthetase, class IIa [Cyanothece sp. CCY0110] gi|126619954|gb|EAZ90678.1| Threonyl-tRNA synthetase, class IIa [Cyanothece sp. CCY0110] Length = 642 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 84/442 (19%), Positives = 157/442 (35%), Gaps = 39/442 (8%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +L +E R D +L L + I + G+ W P G + R+ Sbjct: 234 YLKQQEEAKRRDHRKLGKELKLFS--IQEGAGGGLVFWHPRGATMRYIIEDYWRKAHLDG 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + + +LW SG +D Y + M D ++A P + +++ + S Sbjct: 292 GYELLYTPHVANLELWKTSGHFDFYRENMFDSMDIEEQAYQIKPMNCPFHVLTYKNDLHS 351 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR P + ++ +R E G+MR R F DA+ F L P + + Sbjct: 352 YREFPLRWAELGTVYRYERSGVLHGLMRVRGFTQDDAHIFCL-PTQIAAEILGVLNLTEK 410 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I G K + + P + E + + + Sbjct: 411 ILSDFGFKDYEVNLSTRPEKSVGTDE-----------------GWELATQALVEALNSKS 453 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y D+ K+ D++ + S ++ F ++ + A Sbjct: 454 WEYIEDKGGGAFYGPKIDI---KIKDAIGRTWQCSTIQVD----FNLPERFDMEYVAA-- 504 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + G++ ++ + +P +AP ++ L+ + + R+ Sbjct: 505 -DGSRQRPIMIHRAIFGSLERFYGILI---ENYAGDFPLWLAPIQLRLLPV---SEAQRE 557 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E + A L + G V D GE++G Q A+L P+ IVG+K V + I+ R Sbjct: 558 YGETVVATLKEAGYRVEIDCTGERLGKQIRKAELEKIPVVAIVGNKEVETQSLSIRTRQQ 617 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G M L E+ +N Sbjct: 618 GDIGTMDLTELKKSLDDAIANK 639 >gi|319935875|ref|ZP_08010301.1| threonyl-tRNA synthetase [Coprobacillus sp. 29_1] gi|319809142|gb|EFW05623.1| threonyl-tRNA synthetase [Coprobacillus sp. 29_1] Length = 581 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 160/444 (36%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L L+E RD + +L L M+ +++ G+ +LP G + + +E + Sbjct: 173 QAYLDFLEEAKKRDHKKLGRELDLF--MMSEYAPGMPFFLPHGMLLRNELEKFWYDEHTK 230 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + S +LW SG + +Y + M +++ P + ++++ + Sbjct: 231 EGYEFIKTPIMMSKELWEVSGHWYNYKENMYTSL-VDEREFAIKPMNCPGSLLVYKNGLH 289 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP ++ R E G+ R R F DA+ F +TP+ + ++ Sbjct: 290 SYKDLPIRMGELGQVHRHEASGALNGLFRVRTFTQDDAHIF-MTPDQIESEVVRLIAFID 348 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 R++ LGL + P E + + + + Sbjct: 349 RVYSMLGLSYDI-ELSTRP----------------EEKYIGELEIWEKSEAALAAACQAA 391 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I A Y D H + DSL + +++ T+ Sbjct: 392 GKDYKINPGDGAFYGPKLDFH---VKDSLGRVWQCGTIQLDMNLP--------ERFDLTY 440 Query: 303 KGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 +G+ V + G++ ++ G +W + I ++ Sbjct: 441 VDQNGEKVRPVMVHRVIFGSIERFIGILIEHFAGAFPLWLA-----PAQVKVIPVKNEYH 495 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++I+ L G V DD E++G + A + P Q+++G K + V + Sbjct: 496 LDYSQEIFKLLEAKGIRVEIDDREEKLGYRIREAQMKKIPYQLVLGDKERDERTVTYRQY 555 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +SL+E I + + Sbjct: 556 GEQKQTTVSLDEFICMILKQIEDK 579 >gi|319892730|ref|YP_004149605.1| Threonyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03] gi|317162426|gb|ADV05969.1| Threonyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03] gi|323464237|gb|ADX76390.1| threonyl-tRNA synthetase [Staphylococcus pseudintermedius ED99] Length = 645 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 72/445 (16%), Positives = 153/445 (34%), Gaps = 31/445 (6%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD ++ L T G+ WLP G + I +++ Sbjct: 229 KAHLQLLEERKERDHRRIGKEMELFTNN-QLVGAGLPLWLPNGATIRREIERYIVDKEIS 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHI 122 G + P + + DL+ SG +D Y ++M D+AM+ P + I+ + Sbjct: 288 LGYDHVYTPVMANVDLYKTSGHWDHYQEDMFPPMQLDADEAMVLRPMNCPHHMMIYANKP 347 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ R E ++ + + + P+ K + ++ L Sbjct: 348 HSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDAHIFVRPDQIKEEFKRVVQMIL 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G + R + + + D + D++ Sbjct: 408 DVYEDFGFEDYKFRLS-------------YRDKADKEKYYDDDDMWNTAEAMLKEAVDEM 454 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y DV ++ ++ + + +S ++ F T+ Sbjct: 455 NLPYEEAIGEAAFYGPKLDV---QVKTAMGKEETLSTAQLD----FLLP----KKFELTY 503 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG+ H + G+ + + + + I ++ + Sbjct: 504 IGKDGEHHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPQQVE----IIPVNNDLHY 559 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D +I+ L G V DD E++G + A + P Q++VG K + +++V ++ Sbjct: 560 DYARQIHDELKSQGVRVHIDDRNEKMGYKIREAQMKKIPYQLVVGDKELENNEVNVRQYG 619 Query: 423 TGIREDMSLEEVINYASHRFSNNRP 447 + ++ + + I + Sbjct: 620 SKDQKTVEKDTFIWDLVDEIRLKKQ 644 >gi|319783887|ref|YP_004143363.1| threonyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169775|gb|ADV13313.1| threonyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 658 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 79/445 (17%), Positives = 151/445 (33%), Gaps = 39/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + + +L+E RD ++ L + G+ W G K N+ +R + Sbjct: 233 EAYQTMLEEAEKRDHRKIGREMDLF--HFQEEGPGVVFWHAKGWKMFQNLVNYMRRRLDE 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 291 QGYQEVNAPQVLDKSLWETSGHWGWYRDAMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F + + Sbjct: 351 KHGLKSYRDLPVKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQLAAECLRIN 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L + G I ++ + P + E A+ M + + T Sbjct: 411 -DLILSTYADFGFDEISVKLSTRPDKRVGTDEAWDHAEA----------IMGGVLETIRT 459 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + I SI A Y + L D++ + ++ FG Sbjct: 460 RSGNRIK-TSINPGEGAFYGPKFEY---VLKDAIGREWQCGTTQVDFNLPERFG------ 509 Query: 298 MSATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G K V + G+M ++ ++ G +W + ++ Sbjct: 510 --AFYIGSDSEKKQPVMVHRAICGSMERFLGILIENYSGHFPLWFAPLQVVVATIT---- 563 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++ A+L G D E+I + L P+ ++ G + + V Sbjct: 564 --SDADDYATEVVAKLKAAGLLAEADLRNEKINYKVREHSLAKVPVILVCGKREAEEQTV 621 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + +E + L++ I + Sbjct: 622 NMRRLGSRDQESLGLDQAIAQLTEE 646 >gi|57867165|ref|YP_188820.1| threonyl-tRNA synthetase [Staphylococcus epidermidis RP62A] gi|251811076|ref|ZP_04825549.1| threonyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060] gi|282875897|ref|ZP_06284764.1| threonine--tRNA ligase [Staphylococcus epidermidis SK135] gi|71153576|sp|Q5HNM1|SYT_STAEQ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|57637823|gb|AAW54611.1| threonyl-tRNA synthetase [Staphylococcus epidermidis RP62A] gi|251805411|gb|EES58068.1| threonyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060] gi|281294922|gb|EFA87449.1| threonine--tRNA ligase [Staphylococcus epidermidis SK135] Length = 645 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 151/444 (34%), Gaps = 31/444 (6%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD L L T G+ WLP G + I +++ Sbjct: 229 KAHLKMLEERRERDHRKIGKDLELFTNN-QLVGAGLPLWLPNGATIRREIERYIVDKEVS 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHI 122 G + P L + DL+ SG +D Y ++M ++ M+ P + I+++ Sbjct: 288 MGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPAMKLDEDEAMVLRPMNCPHHMMIYKNKP 347 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ R E ++ + + + P+ K + ++ Sbjct: 348 HSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQ 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G + R + D E + D++ Sbjct: 408 DVYKDFGFEDYRFRLS-----YRDPEDKHKYFDDDEM--------WEKAESMLKEASDEL 454 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y DV ++ ++ + + +S ++ F ++ T+ Sbjct: 455 GLTYEEAIGEAAFYGPKLDV---QVKTAMGKEETLSTAQLD----FLLPERFD----LTY 503 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG+ H + G+ + + + +I +NI H Sbjct: 504 IGQDGEQHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPMQVEIIPVNIDLH----Y 559 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D + L G V DD E++G + A + P Q++VG + V + +V ++ Sbjct: 560 DYARLLQDELKSQGVRVEIDDRNEKMGYKIREAQMKKIPYQIVVGDQEVENQEVNVRKYG 619 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 + +E + +E I + Sbjct: 620 SEKQESVEKDEFIWNVIDEIRLKK 643 >gi|223041831|ref|ZP_03612021.1| prolyl-tRNA synthetase [Actinobacillus minor 202] gi|223017400|gb|EEF15821.1| prolyl-tRNA synthetase [Actinobacillus minor 202] Length = 317 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 122/243 (50%), Positives = 159/243 (65%), Gaps = 1/243 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFNDRGNRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHVDKASLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V DF E + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDFAANIELAEAV 239 Query: 241 DII 243 + Sbjct: 240 AVG 242 >gi|153947724|ref|YP_001400022.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758] gi|170023340|ref|YP_001719845.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII] gi|166980172|sp|A7FFJ4|SYP_YERP3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701362|sp|B1JQI5|SYP_YERPY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|152959219|gb|ABS46680.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758] gi|169749874|gb|ACA67392.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII] Length = 572 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 122/235 (51%), Positives = 161/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EINSYKQLPLNFFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+ L + A++G IGG SHEF VLA++GE + D+ E Sbjct: 181 YSKIFSRMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVF-STGSDYAANIE 234 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 72/188 (38%), Positives = 110/188 (58%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGHIF GTKYS M AT +G DG++ + MG Sbjct: 384 VADLRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRNQVMTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKV 375 YGIG RVVAA IE +HD +GIIWPD++APF+++++ + H ++ E++Y L Sbjct: 444 YGIGVSRVVAAAIEQNHDDRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYTTLRSH 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G FA +L+G P +++G + + +VE K+R G ++ + E++ Sbjct: 504 GIDVILDDRKERPGVMFADMELIGVPHNIVIGDRNLDSEEVEYKNRRVGEKQMIKTSEIV 563 Query: 436 NYASHRFS 443 + + Sbjct: 564 EFLLSQIK 571 >gi|49475537|ref|YP_033578.1| threonyl-tRNA synthetase [Bartonella henselae str. Houston-1] gi|73919770|sp|Q6G3K1|SYT_BARHE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|49238343|emb|CAF27567.1| Threonyl-tRNA synthetase [Bartonella henselae str. Houston-1] Length = 658 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 81/445 (18%), Positives = 156/445 (35%), Gaps = 39/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD ++ L + G+ W G K N+ +R + Sbjct: 233 KAYLHMLEEAEKRDHRRLGREMNLF--HFQEEGPGMIFWHKKGWKMFQNLINYMRRRLDD 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-----MIYGPTHEEVMTDIF 118 E++ P + LW SG ++ Y + M + + P + IF Sbjct: 291 HQYAEVNAPQVLDRSLWEISGHWEWYKENMFKAIPAAEDWDNENVYALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + + R E G+MR R F DA+ F + + N Sbjct: 351 KHGLKSYRDLPTRIAEFGVVHRYEPSGSLHGLMRVRCFTQDDAHIFCTDEQLADECLNIN 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L + G K I ++ + P S A+ + M+ + + T Sbjct: 411 -DLILSTYADFGFKEISLKLSTRPEKRVGSDALWDHAE----------NIMESVLKTIET 459 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I SI+ A Y + L D++ + ++ F ++ Sbjct: 460 KSAGQIK-TSILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQLD----FNLPERF--- 508 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 +A + D + + G+M ++ + G +W ++ Sbjct: 509 -NAFYIDKDSEKRQPVMIHRAIFGSMERFLGILIENFSGHMPLWFAPEQIVVATIT---- 563 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + +K+ A+L VG D E+I + L P+ ++ G + + V Sbjct: 564 --SEANEYAKKLTAKLKSVGLSTTLDLRNEKINYKIREHSLQKVPVILVCGKRESETNSV 621 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + + +S+EEVI + Sbjct: 622 NMRRLGSTEQIFLSVEEVIEQLKNE 646 >gi|87198229|ref|YP_495486.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Novosphingobium aromaticivorans DSM 12444] gi|123749972|sp|Q2GBX1|SYT_NOVAD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|87133910|gb|ABD24652.1| Ser-tRNA(Thr) hydrolase [Novosphingobium aromaticivorans DSM 12444] Length = 664 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 83/450 (18%), Positives = 141/450 (31%), Gaps = 48/450 (10%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +++ L + Q + G W P G + A +R + G Sbjct: 240 LTRLEEAAKRDHRKLGNEMDLF--HLQQEAHGSVFWHPKGYLIWRELEAYMRRAIDGAGY 297 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLAD-------------RNDKAMIYGPTHEEV 113 E+ P + A W +SG + Y + M + D + M P + Sbjct: 298 REVKTPQVMDARQWEQSGHWGKYRENMFVIPDEVPNVDDEGPIVSNDADWMALKPMNCPA 357 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IFR IKSYR LP Y+ R+E G+MR R+F DA+ F + Sbjct: 358 HVLIFRQGIKSYRELPLRLYENGCCHRNEPHGALHGLMRVRQFTQDDAHIFCREDQIVSE 417 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 RI+ G + P + E A+ Sbjct: 418 -VQAFCELADRIYKHFGFTYSI-KLALRPEKRFGTEEMWDKAERELRDAVVRAGLATEEY 475 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 E + A YA + H L D++ +V + Sbjct: 476 GWEE------------LPGEGAFYAPKLEWH---LTDAIGRTWQVGTIQSDRVLP----- 515 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + A++ G DG+ H + G+ ++ G+ +W V ++ Sbjct: 516 ---ERLDASYIGEDGEKHRPVMLHRAIFGSYERFIGILIEHFAGRLPVWLAPVQAVVATI 572 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + D A+L G D E+I + L P ++VG + Sbjct: 573 V------SDADDYARDALAKLKAAGIRADTDLRNEKINYKVREHSLQKVPYLLVVGKREA 626 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHR 441 + V I+ ++ M L+E I Sbjct: 627 EEGTVAIRILGEQHQKVMPLDEAIALLKGE 656 >gi|254369559|ref|ZP_04985570.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica FSC022] gi|157122513|gb|EDO66648.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica FSC022] Length = 634 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 143/442 (32%), Gaps = 41/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD L L + S GI W G + V +R N+ G Sbjct: 230 YLNMLEEAEKRDHRKIGKVLDLF--HFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG Y + M ++ P + ++ + + SY Sbjct: 288 CSEIRTPLIADFSLWQKSGHASKYAENMF-ATKSENRDFAIRPMNCPTCVQVYNTKLHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F + + + + Sbjct: 347 RDLPIRMAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEV- 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++ P E D D Sbjct: 406 YKDFGFNDFAVKIALRPENRIGDDE-----------------TWDKSEQMLKNALDANNV 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + H L D++ + + ++ G AT+ Sbjct: 449 SYELFPGEGAFYGPKIEFH---LKDAIGRSWQCGTIQLDFSMPQRLG--------ATYID 497 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G+ V + +G++ ++ + G +W V + + N D Sbjct: 498 KNGEKQVSVMLHRAIVGSLERFIGMLIEHYAGNLPLWLAPVQVAVMGISN------NQDD 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C++++ L K G D E+IG + LL P VI+G + I+ Sbjct: 552 YCKEVFIMLEKNGIRAKLDLRNEKIGFKIREHTLLRVPYLVILGKNEQEQKIITIRKHSG 611 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS+++ + + Sbjct: 612 EDLGQMSVDDFCAFLDKQIQAK 633 >gi|145598925|ref|YP_001163001.1| prolyl-tRNA synthetase [Yersinia pestis Pestoides F] gi|166980173|sp|A4TL66|SYP_YERPP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|145210621|gb|ABP40028.1| prolyl-tRNA synthetase [Yersinia pestis Pestoides F] Length = 572 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 122/235 (51%), Positives = 161/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EINSYKQLPLNFFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+ L + A++G IGG SHEF VLA++GE + D+ E Sbjct: 181 YSKIFSRMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVF-STGSDYAANIE 234 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 72/188 (38%), Positives = 110/188 (58%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGHIF GTKYS M AT +G DG++ + MG Sbjct: 384 VADLRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGTKYSEVMKATVQGEDGRNQVMTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKV 375 YGIG RVVAA IE +HD +GIIWPD++APF+++++ + H ++ E++Y L Sbjct: 444 YGIGVSRVVAAAIEQNHDDRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYTTLRSH 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G FA +L+G P +++G + + +VE K+R G ++ + E++ Sbjct: 504 GIDVILDDRKERPGVMFADMELIGVPHNIVIGDRNLDSEEVEYKNRRVGEKQMIKTSEIV 563 Query: 436 NYASHRFS 443 + + Sbjct: 564 EFLLSQIK 571 >gi|253689709|ref|YP_003018899.1| prolyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259511609|sp|C6DDF6|SYP_PECCP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|251756287|gb|ACT14363.1| prolyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 572 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYMLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLWVESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWVESGRWDQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 EISSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQVTYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+ L ++A++G IGG+ SHEF VLA +GE + D+ E Sbjct: 181 YSQIFSRMDLDFRAVQADTGSIGGNASHEFQVLAASGEDDIVF-STDSDYAANIE 234 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 70/187 (37%), Positives = 109/187 (58%), Gaps = 3/187 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGHIF G+KYS + AT +G DG++ + MG Sbjct: 384 VADIRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGSKYSEALKATVQGEDGRNQTLTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKV 375 YGIG RVVAA IE +HD +GIIWPD++APF ++++ + H ++ E IY +L Sbjct: 444 YGIGVTRVVAAAIEQNHDERGIIWPDAIAPFHVAILPMNMHKSFRVKEVAEDIYQQLRAK 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G FA +L+G P +++G + + ++E KHR G ++ + E++ Sbjct: 504 GIEVLLDDRKERPGVMFADMELIGVPHTIVIGDRNLDSEEIEYKHRRIGEKQMIKTNEIV 563 Query: 436 NYASHRF 442 ++ Sbjct: 564 DFLLANI 570 >gi|156548890|ref|XP_001606543.1| PREDICTED: similar to ENSANGP00000011343 [Nasonia vitripennis] Length = 430 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 134/453 (29%), Positives = 219/453 (48%), Gaps = 38/453 (8%) Query: 2 RRSKYFLPILQENPR-----DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAI 56 R SK F P + D S++LM+ G+I + G+Y++LPLG ++L + + Sbjct: 6 RVSKLFQPSIVIPKSSLPKIDLTSKSYQLMINAGIISNVATGMYAFLPLGLRSLQKLINL 65 Query: 57 IREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTD 116 I +E GA ++ +P L +LW ++ R E+ L DR+ K + PT+EE +++ Sbjct: 66 IDQEMTAIGAQKILLPVLTQTNLWQQTARLKQAQSELFMLNDRHGKEFLLSPTYEESISN 125 Query: 117 IFRS-HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 + + LP YQ K+RDE++PR G++RSREF+MKD Y+FDL + +K +Y Sbjct: 126 MISQVGPLQRKQLPLRLYQTSSKWRDEIKPRLGLLRSREFIMKDLYTFDLDADSAKCTYE 185 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 ++ +Y +IF R+G+ + A++G IGG +SHE+ ++D GE + K Sbjct: 186 EVSDAYKKIFERIGIPYKKVIADTGIIGGSISHEYHYVSDIGEDVILSCKSCKYE----- 240 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 V K E +S IEVGH F GTKYS Sbjct: 241 -----------------------VDKVDEPKTRCPKCEEPLISTNSIEVGHTFLLGTKYS 277 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 P+ ATF ++ K +++MG YG+G R++A IE I WP +AP I +I K Sbjct: 278 KPLKATFVDSNCKKQFLEMGCYGLGLTRILATAIEILSTNLEIRWPLELAPHSICVIPPK 337 Query: 356 A--HDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVS 412 ++ +Y+ + DV +DD IG +F A G+P+ +I+G ++ Sbjct: 338 KGSKEEAKAQLAYDVYSTIQNCNLDVIFDDRVDMTIGKRFIDARKTGYPVVIIIGKSCLA 397 Query: 413 DS-KVEIKHRLTGIREDMSLEEVINYASHRFSN 444 D VE+ + +++LE V+ + Sbjct: 398 DKPLVEVHNVYKASHVNLALENVVEHVKGLLKK 430 >gi|113461448|ref|YP_719517.1| prolyl-tRNA synthetase [Haemophilus somnus 129PT] gi|123031424|sp|Q0I4S8|SYP_HAES1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|112823491|gb|ABI25580.1| prolyl-tRNA synthetase [Haemophilus somnus 129PT] Length = 571 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 121/243 (49%), Positives = 163/243 (67%), Gaps = 1/243 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSKYLLSTLKETPNDAQVVSHQLMLRAGMIRPLASGLYNWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GAIE+ +P +Q A+LW ES R++ YG E+LR DR ++ + GPTHEEV+TD+ Sbjct: 61 MNKSGAIEVEMPVVQPAELWQESQRWEQYGPELLRFVDRGNRDFVLGPTHEEVITDLVHR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR REFLMKDAYSF + E +++Y+ M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRGREFLMKDAYSFHTSKECLQNTYDVMYRT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE + S + D+ E + Sbjct: 181 YNNIFTRLGLDFRAVQADTGSIGGSASHEFQVLAKSGEDDIVFSSN-SDYAANIELAEAV 239 Query: 241 DII 243 I Sbjct: 240 AIG 242 Score = 175 bits (443), Expect = 2e-41, Method: Composition-based stats. Identities = 71/189 (37%), Positives = 107/189 (56%), Gaps = 4/189 (2%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGHIF GTKYS M AT +G DG+ + MG Sbjct: 382 VADLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRPQTMIMGC 441 Query: 317 YGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSK 374 YGIG RVVAA IE HD K I D +APF +++I + + + E++Y L Sbjct: 442 YGIGVSRVVAATIEQCHDEKGIIWSSDEIAPFTVAIIPMNMYKSKNVQIFAEELYQSLLN 501 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 DV +DD E+ G FA +L+G P +++G K + ++E K+R TG ++ ++ E+V Sbjct: 502 KNVDVIFDDRKERPGVMFADMELIGVPHMIVIGEKNLEKGEIEYKNRRTGEKQIIAKEQV 561 Query: 435 INYASHRFS 443 +++ + R + Sbjct: 562 LDFLAQRVN 570 >gi|170718445|ref|YP_001783662.1| prolyl-tRNA synthetase [Haemophilus somnus 2336] gi|189083500|sp|B0UWK9|SYP_HAES2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|168826574|gb|ACA31945.1| prolyl-tRNA synthetase [Haemophilus somnus 2336] Length = 571 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 121/243 (49%), Positives = 163/243 (67%), Gaps = 1/243 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSKYLLSTLKETPNDAQVVSHQLMLRAGMIRPLASGLYNWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GAIE+ +P +Q A+LW ES R++ YG E+LR DR ++ + GPTHEEV+TD+ Sbjct: 61 MNKSGAIEVEMPVVQPAELWQESQRWEQYGPELLRFVDRGNRDFVLGPTHEEVITDLVHR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR REFLMKDAYSF + E +++Y+ M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRGREFLMKDAYSFHTSKECLQNTYDVMYRT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE + S + D+ E + Sbjct: 181 YNNIFTRLGLDFRAVQADTGSIGGSASHEFQVLAKSGEDDIVFSSN-SDYAANIELAEAV 239 Query: 241 DII 243 I Sbjct: 240 AIG 242 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 71/189 (37%), Positives = 107/189 (56%), Gaps = 4/189 (2%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGHIF GTKYS M AT +G DG+ + MG Sbjct: 382 VADLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRPQTMIMGC 441 Query: 317 YGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSK 374 YGIG RVVAA IE HD K I D +APF +++I + + + E++Y L Sbjct: 442 YGIGVSRVVAATIEQCHDEKGIIWSSDEIAPFTVAIIPMNMYKSKNVQIFAEELYQSLLN 501 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 DV +DD E+ G FA +L+G P +++G K + ++E K+R TG ++ ++ E+V Sbjct: 502 KNVDVIFDDRKERPGVMFADIELIGVPHMIVIGEKNLEKGEIEYKNRRTGEKQIIAKEQV 561 Query: 435 INYASHRFS 443 +++ + R + Sbjct: 562 LDFLAQRVN 570 >gi|260901781|ref|ZP_05910176.1| threonine--tRNA ligase [Vibrio parahaemolyticus AQ4037] gi|308108104|gb|EFO45644.1| threonine--tRNA ligase [Vibrio parahaemolyticus AQ4037] Length = 386 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 72/417 (17%), Positives = 137/417 (32%), Gaps = 38/417 (9%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + Q + G+ W G ++ +R++ N E+ P + LW SG +D Y Sbjct: 1 MQQEAPGMVFWHHNGWSIFRDLEVFVRDKLNEYDYQEVKGPLMMDRVLWERSGHWDKYAD 60 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVM 150 M ++ P + IF +KSYR+LP + R+E G+M Sbjct: 61 AMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIM 119 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F T + + G +I ++ + P S E Sbjct: 120 RVRGFTQDDAHIFC-TESQIQEEVTSCIKMVYDTYQTFGFDNIVVKLSTRPEKRVGSDE- 177 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 D + + + I E A Y + L+D Sbjct: 178 ----------------IWDQSEEALKQSLESMEIPYEIQEGEGAFYGPKIEF---TLYDC 218 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD-HYVQMGSYGIGAMRVVAAVI 329 L + ++ G AT+ G + + V + +G++ ++ Sbjct: 219 LDRAWQCGTVQLDFNLPGRLG--------ATYVGENNERLVPVMIHRAILGSLERFIGIL 270 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 + G W +++ ++I +L K G D E+IG Sbjct: 271 IEEYAGFFPTWLAPEQAVLMNIT------DKQSGYVQEIVQKLQKSGIRAKADLRNEKIG 324 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 + L P ++VG + + ++ ++ R +++ I Y S+ + Sbjct: 325 FKIREHTLKRVPYMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDEISSRK 381 >gi|302342263|ref|YP_003806792.1| threonyl-tRNA synthetase [Desulfarculus baarsii DSM 2075] gi|301638876|gb|ADK84198.1| threonyl-tRNA synthetase [Desulfarculus baarsii DSM 2075] Length = 627 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 79/439 (17%), Positives = 140/439 (31%), Gaps = 39/439 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD +L L + + G+ W G + R E R Sbjct: 216 KQYLHMLEEAKKRDHRKLGKELDLFSFH-EEIGPGMVVWHNRGMMLRMVLEDFERREHLR 274 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P L +LW SG YD+Y + M + + A P + I++S + Sbjct: 275 RGYQIVQGPQLLKRELWERSGHYDNYRENM-YFTEVDGTAYGVKPMNCLAHMLIYKSKMH 333 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP +++ R E G+ R R F DA+ + + Sbjct: 334 SYRDLPIRMFELGTVHRHEKSGVLGGLTRVRAFTQDDAHILCRPDQLEGE-IMGVMDFVG 392 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + G + P S E + + + Sbjct: 393 EVMAIFGFDYGM-ELSTRPDKSIGSDE-----------------DWERATNALRKALEAS 434 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I E A Y D KL D+L + + + F ++ L A Sbjct: 435 GRPYEINEGDGAFYGPKIDF---KLKDALGRQWQCATIQCD----FTLPERFDLTYIA-- 485 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + R + +IE A + Sbjct: 486 PDDSRQRPVMIHRVILGSLERFIGVLIEHYAGRFPFWLAPEQARVLTVT-------ERAD 538 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D +++A L G V D E++G++ A LL P +++G + V + +V + R Sbjct: 539 DWAREVFAALKNAGYRVEMDLRNEKLGAKVREAQLLKVPYMLVIGDREVDERQVAPRLRS 598 Query: 423 TGIREDMSLEEVINYASHR 441 + L ++ + + Sbjct: 599 GKNLPPLDLAGLLALFAEQ 617 >gi|22126985|ref|NP_670408.1| prolyl-tRNA synthetase [Yersinia pestis KIM 10] gi|45442549|ref|NP_994088.1| prolyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001] gi|108806542|ref|YP_650458.1| prolyl-tRNA synthetase [Yersinia pestis Antiqua] gi|108813091|ref|YP_648858.1| prolyl-tRNA synthetase [Yersinia pestis Nepal516] gi|149366930|ref|ZP_01888963.1| prolyl-tRNA synthetase [Yersinia pestis CA88-4125] gi|162418775|ref|YP_001607747.1| prolyl-tRNA synthetase [Yersinia pestis Angola] gi|165927072|ref|ZP_02222904.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. F1991016] gi|165939831|ref|ZP_02228371.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. IP275] gi|166011913|ref|ZP_02232811.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. E1979001] gi|166211331|ref|ZP_02237366.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. B42003004] gi|167400131|ref|ZP_02305649.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419446|ref|ZP_02311199.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425324|ref|ZP_02317077.1| prolyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470133|ref|ZP_02334837.1| prolyl-tRNA synthetase [Yersinia pestis FV-1] gi|218928237|ref|YP_002346112.1| prolyl-tRNA synthetase [Yersinia pestis CO92] gi|229837776|ref|ZP_04457936.1| prolyl-tRNA synthetase [Yersinia pestis Pestoides A] gi|229840998|ref|ZP_04461157.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843099|ref|ZP_04463249.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India 195] gi|229903534|ref|ZP_04518647.1| prolyl-tRNA synthetase [Yersinia pestis Nepal516] gi|270487315|ref|ZP_06204389.1| proline--tRNA ligase [Yersinia pestis KIM D27] gi|294503084|ref|YP_003567146.1| prolyl-tRNA synthetase [Yersinia pestis Z176003] gi|116256081|sp|Q7CH25|SYP_YERPE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|123246276|sp|Q1CFH2|SYP_YERPN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|123372686|sp|Q1CAK9|SYP_YERPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701361|sp|A9R371|SYP_YERPG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|21960030|gb|AAM86659.1|AE013912_3 proline tRNA synthetase [Yersinia pestis KIM 10] gi|45437414|gb|AAS62965.1| prolyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001] gi|108776739|gb|ABG19258.1| prolyl-tRNA synthetase [Yersinia pestis Nepal516] gi|108778455|gb|ABG12513.1| prolyl-tRNA synthetase [Yersinia pestis Antiqua] gi|115346848|emb|CAL19734.1| prolyl-tRNA synthetase [Yersinia pestis CO92] gi|149290544|gb|EDM40620.1| prolyl-tRNA synthetase [Yersinia pestis CA88-4125] gi|162351590|gb|ABX85538.1| prolyl-tRNA synthetase [Yersinia pestis Angola] gi|165912234|gb|EDR30871.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. IP275] gi|165920968|gb|EDR38192.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. F1991016] gi|165989179|gb|EDR41480.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. E1979001] gi|166207102|gb|EDR51582.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. B42003004] gi|166962187|gb|EDR58208.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050839|gb|EDR62247.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055724|gb|EDR65508.1| prolyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229679304|gb|EEO75407.1| prolyl-tRNA synthetase [Yersinia pestis Nepal516] gi|229689975|gb|EEO82034.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India 195] gi|229697364|gb|EEO87411.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229704153|gb|EEO91165.1| prolyl-tRNA synthetase [Yersinia pestis Pestoides A] gi|262361122|gb|ACY57843.1| prolyl-tRNA synthetase [Yersinia pestis D106004] gi|262365363|gb|ACY61920.1| prolyl-tRNA synthetase [Yersinia pestis D182038] gi|270335819|gb|EFA46596.1| proline--tRNA ligase [Yersinia pestis KIM D27] gi|294353543|gb|ADE63884.1| prolyl-tRNA synthetase [Yersinia pestis Z176003] gi|320014203|gb|ADV97774.1| prolyl-tRNA synthetase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 572 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 122/235 (51%), Positives = 161/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EINSYKQLPLNFFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+ L + A++G IGG SHEF VLA++GE + D+ E Sbjct: 181 YSKIFSRMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVF-STGSDYAANIE 234 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 72/188 (38%), Positives = 110/188 (58%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGHIF GTKYS M AT +G DG++ + MG Sbjct: 384 VADLRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGTKYSEVMKATVQGEDGRNQVMTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKV 375 YGIG RVVAA IE +HD +GIIWPD++APF+++++ + H ++ E++Y L Sbjct: 444 YGIGVSRVVAAAIEQNHDDRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYTTLRSH 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G FA +L+G P +++G + + +VE K+R G ++ + E++ Sbjct: 504 GIDVILDDRKERPGVMFADMELIGVPHNIVIGDRNLDSEEVEYKNRRVGEKQMIKTSEIV 563 Query: 436 NYASHRFS 443 + + Sbjct: 564 EFLLSQIK 571 >gi|51597293|ref|YP_071484.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953] gi|186896398|ref|YP_001873510.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+] gi|81825738|sp|Q667L4|SYP_YERPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701360|sp|B2JZ09|SYP_YERPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|51590575|emb|CAH22216.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953] gi|186699424|gb|ACC90053.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+] Length = 572 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 123/235 (52%), Positives = 161/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDELRPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EINSYKQLPLNFFQIQTKFRDELRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+ L + A++G IGG SHEF VLA++GE + D+ E Sbjct: 181 YSKIFSRMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVF-STGSDYAANIE 234 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 72/188 (38%), Positives = 110/188 (58%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGHIF GTKYS M AT +G DG++ + MG Sbjct: 384 VADLRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRNQVMTMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKV 375 YGIG RVVAA IE +HD +GIIWPD++APF+++++ + H ++ E++Y L Sbjct: 444 YGIGVSRVVAAAIEQNHDDRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYTTLRSH 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G FA +L+G P +++G + + +VE K+R G ++ + E++ Sbjct: 504 GIDVILDDRKERPGVMFADMELIGVPHNIVIGDRNLDSEEVEYKNRRVGEKQMIKTSEIV 563 Query: 436 NYASHRFS 443 + + Sbjct: 564 EFLLSQIK 571 >gi|253999985|ref|YP_003052048.1| prolyl-tRNA synthetase [Methylovorus sp. SIP3-4] gi|253986664|gb|ACT51521.1| prolyl-tRNA synthetase [Methylovorus sp. SIP3-4] Length = 574 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 170/235 (72%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ +E P++AE+ SH+LMLR G+I + G+Y+W+PLG + L V ++R+E Sbjct: 1 MRASQFFIATQKEAPQEAELPSHRLMLRAGLIKRLGSGLYTWMPLGLRVLRKVETVVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A+LW E+GR+D +G +ML++ DR++++ +GPTHEEV+TD+ R Sbjct: 61 MNKAGALELLMPAVQPAELWQETGRWDVFGPQMLKITDRHERSFCFGPTHEEVITDLARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + E + +Y M+ + Sbjct: 121 EIKSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFVMKDAYSFHTSLESLEATYASMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +F+RLGLK +RA++G IGGD SHEF VLAD+GE + D+ E Sbjct: 181 YSNVFNRLGLKFRAVRADTGAIGGDGSHEFHVLADSGEDALAYC-PASDYAANVE 234 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 67/188 (35%), Positives = 108/188 (57%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K V RGIEVGHIF TKY+ M+AT++ +G+ ++MG Sbjct: 387 VADIRNVINGDPSPDGKGVLELCRGIEVGHIFQLRTKYAEAMNATYQAENGELKIMEMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKV 375 YGIG R+V A IE +D +GII+P ++APF +++ I +DA +YA L + Sbjct: 447 YGIGVSRIVGAAIEQGNDARGIIFPAAMAPFSVAIAPIGMDRSDAVKDAALALYAELQQA 506 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD GE+ G FA +L+G P +V++G + + + +VE + R + ++L E++ Sbjct: 507 GIDVLLDDRGERPGVMFADLELIGIPHRVVIGDRGLKEGQVEYQARTDEQAQSVALSEIV 566 Query: 436 NYASHRFS 443 + + Sbjct: 567 SKLKQALA 574 >gi|161723258|ref|YP_094730.2| prolyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|114152207|sp|Q5ZXN7|SYP_LEGPH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 569 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 134/398 (33%), Positives = 205/398 (51%), Gaps = 21/398 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FL +E P DAEIASH+LMLR+GMI + G+Y+W+PLG + L V I+REE Sbjct: 1 MRASQWFLVTQKETPNDAEIASHQLMLRSGMIRKLGSGLYTWMPLGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+T A+E+ +P++Q A+LW E+GR++++G ++L + D N + +GPTHEEV+TDI R+ Sbjct: 61 MNKTHAMELLMPSVQPAELWQETGRWETFGGQLLTMKDSNQREYCFGPTHEEVITDIMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L+ E + +Y M+ + Sbjct: 121 ELQSYKQLPVNFYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHLSLESLQETYKDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GLK + A++G IGG SHEF VLA++GE +F S + T Sbjct: 181 YCRIFDRMGLKYRAVEADTGAIGGSASHEFQVLAESGEDLIFYSDASDYAANIEQATSLK 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + E T D N+K D + +++ I + + Sbjct: 241 PLKANQPCNETIT-----LVDTPNQKTIDEVASFLGIASNQTIKTLIVKGKEHPMVALVL 295 Query: 301 TFKGADGKDHYVQM-----------GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 + ++ + ++ I +I Sbjct: 296 RGDDELNEVKAIKHPLVHAPLSFIDEELILKTLKTPLGSIGPIQLNIPVIVDHHALAMPS 355 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 + D+ +A + D +D + Sbjct: 356 FVCGANQADKHFINAAWE-----RDAKYDDAYDLRNVK 388 Score = 174 bits (441), Expect = 3e-41, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 109/197 (55%), Gaps = 3/197 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A Y D+ N K D P+ K RGIEVGH+F G KY+ M+A+ G+ Sbjct: 373 ERDAKYDDAYDLRNVKEGDPSPDGKGTLHCCRGIEVGHVFQLGDKYAKAMNASVINEQGQ 432 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 + MG YG+G RVVAA IE HD GIIWP ++APF++++I + A Q ++ E Sbjct: 433 LQTMIMGCYGLGITRVVAAAIEQHHDEHGIIWPQALAPFQVNIIPLNGARSQAVKEQAES 492 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +Y +L G DV DD E+ G FA DL+G P +++V + + VE K R++ + Sbjct: 493 LYQQLKSHGIDVLLDDRNERAGVLFADNDLIGIPHRLVVSERNLEQGCVEYKARISSETQ 552 Query: 428 DMSLEEVINYASHRFSN 444 ++L++V+N+ + Sbjct: 553 LINLDKVVNFIIELINK 569 >gi|30249296|ref|NP_841366.1| prolyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718] gi|81838727|sp|Q82UZ8|SYP_NITEU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|30180615|emb|CAD85228.1| Prolyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718] Length = 568 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 127/292 (43%), Positives = 175/292 (59%), Gaps = 3/292 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FL L+E P +AE+ SH+LMLR G+I + G+Y+W+PLG + L + IIREE Sbjct: 1 MRVSQFFLATLKEAPAEAELISHRLMLRAGLIKRLGSGLYTWMPLGLRILHKIEHIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N +GA+E+ +P + A+LW E+GR+D +G +ML++ DR+ +GPTHEEV+ DI R Sbjct: 61 MNNSGALELLMPAVHPAELWQETGRWDVFGPQMLKIQDRHKHDFCFGPTHEEVIVDIARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + + +Y M + Sbjct: 121 EIKSYRQLPINFYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHADVDSLEQTYRLMQET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GLK + A++G IGG SHEF VLAD+GE + D+ E + Sbjct: 181 YSRIFTRIGLKFRAVAADTGAIGGSGSHEFHVLADSGEDAIAFC-PASDYAANIELAEAV 239 Query: 241 DIISLNSIVEQWTAPYAATSD--VHNEKLFDSLPENKRVSARGIEVGHIFYF 290 A A + F +P + + A + G FY Sbjct: 240 PHGIPRKEPAGIMAKIATPDRKSCQDVADFLGIPVEQTLKALAVTAGGKFYL 291 Score = 159 bits (403), Expect = 7e-37, Method: Composition-based stats. Identities = 69/183 (37%), Positives = 103/183 (56%), Gaps = 3/183 (1%) Query: 261 DVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P+ K V RGIEVGH+F TKYS M AT+ G+ ++MG YG Sbjct: 382 DIRNIVAGDPSPDGKGVLEICRGIEVGHVFQLRTKYSEKMKATYLDESGQTRIMEMGCYG 441 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGC 377 IG R+VAA IE ++D +GII+P ++APF++S+I + Q R EK+Y G Sbjct: 442 IGVSRIVAAAIEQNYDERGIIFPQTIAPFQLSIIPVGYHKSQQVRTEAEKLYQACRSAGI 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V DD E+ G FA +L+G P ++++G + + + VE + RL + +SL E + Sbjct: 502 EVLLDDREERPGVMFADQELIGIPHRIVIGERNLREGMVEYQGRLDKTPQMLSLSEAASI 561 Query: 438 ASH 440 S Sbjct: 562 ISK 564 >gi|258543749|ref|ZP_05703983.1| proline--tRNA ligase [Cardiobacterium hominis ATCC 15826] gi|258520985|gb|EEV89844.1| proline--tRNA ligase [Cardiobacterium hominis ATCC 15826] Length = 567 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 132/304 (43%), Positives = 177/304 (58%), Gaps = 5/304 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+++L +E P DAE+ SH+LMLR GMI Q++ G+YSWLPLG + L V IIREE Sbjct: 1 MRLSRFWLTTQKETPADAEVISHQLMLRAGMIRQNALGVYSWLPLGLRVLRKVEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR G++E+ +P +Q +LW ESGR+ YG E+LR DR+++ GPTHEEV+TD+ R Sbjct: 61 MNRAGSLELLMPGVQPGELWQESGRWQDYGPELLRFLDRHEREYCLGPTHEEVITDLMRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR REFLMKDAYSF L + +Y M+ + Sbjct: 121 DLSSYKQLPLNVYQIQTKFRDEIRPRFGVMRGREFLMKDAYSFHLDEASLQATYQDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y RIF RLGL P+ A++G IGG SHEF VLA TGE + S + E + Sbjct: 181 YCRIFDRLGLDYRPVLADNGSIGGTGSHEFHVLAATGEDAIVFSSSGS-YAANLEKAEAL 239 Query: 240 ---DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + + +E+ P T EK + + G I + Sbjct: 240 RPTAPRPAPAAAMEKRPTPDCKTIAALVEKHGVPIERTIKTLMVAGAEGGIVALVIRGDH 299 Query: 297 PMSA 300 ++A Sbjct: 300 ELNA 303 Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats. Identities = 72/203 (35%), Positives = 107/203 (52%), Gaps = 3/203 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLP 297 +D +I + P +D+ N D P+ RGIEVGHIF G KYS Sbjct: 362 EDDYHYFNINWERDVPLGKVADLRNIVEGDPAPDGSGTLAIRRGIEVGHIFQLGKKYSEA 421 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA- 356 M + DG MG YGIG RVVAA IE +HD +GIIWP ++APF ++++ + A Sbjct: 422 MGLKIQLEDGGSAIPLMGCYGIGVTRVVAAAIEQNHDERGIIWPQAIAPFTVAILPLNAA 481 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 A E +Y +L G DV DD G++ G FA DL+G P +V++ K +++ +V Sbjct: 482 KSPEVMAAAEALYQKLLAAGVDVVLDDRGKRPGFMFADMDLIGIPARVVISDKTLANGEV 541 Query: 417 EIKHRLTGIREDMSLEEVINYAS 439 E K R + E ++L+ + + + Sbjct: 542 EYKERRSDSAEMVALDAIYDRLT 564 >gi|271501814|ref|YP_003334840.1| prolyl-tRNA synthetase [Dickeya dadantii Ech586] gi|270345369|gb|ACZ78134.1| prolyl-tRNA synthetase [Dickeya dadantii Ech586] Length = 572 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 126/235 (53%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYMLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR D+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRFVDRGDRPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EISSYKQLPLNFYQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQVTYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+ L P++A++G IGG+ SHEF VLA +GE + D+ E Sbjct: 181 YGKIFSRMDLDFRPVQADTGSIGGNASHEFQVLASSGEDDIVF-STESDYAANIE 234 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 70/185 (37%), Positives = 111/185 (60%), Gaps = 3/185 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K + RGIEVGHIF G KYS + AT +G DG++ + MG Y Sbjct: 385 ADIRNVVEGDRSPDGKGTLLIKRGIEVGHIFQLGKKYSEALKATVQGEDGRNQTLTMGCY 444 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVG 376 GIG RV+AA IE +HD +GIIWPD++APF+++++ + H ++ E IY +L G Sbjct: 445 GIGVTRVIAAAIEQNHDDRGIIWPDAIAPFQVAILPMNMHKSFRVQEVAEGIYQQLRANG 504 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD E+ G FA +L+G P +++G + + + ++E KHR G +E + +++ Sbjct: 505 IDVLLDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDEIEYKHRRKGEKEMIKAGDIVE 564 Query: 437 YASHR 441 + + Sbjct: 565 FLLSQ 569 >gi|240850680|ref|YP_002972080.1| threonyl-tRNA synthetase [Bartonella grahamii as4aup] gi|240267803|gb|ACS51391.1| threonyl-tRNA synthetase [Bartonella grahamii as4aup] Length = 658 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 84/445 (18%), Positives = 156/445 (35%), Gaps = 39/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD ++ L + G+ W G K N+ +R + Sbjct: 233 KAYLHMLEEAEKRDHRRLGREMDLF--HFQEEGPGMIFWHKKGWKMFQNLINYMRRRLDD 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD-----RNDKAMIYGPTHEEVMTDIF 118 E++ P + LW SG + Y + M ++ + P + IF Sbjct: 291 HQYAEVNAPQVLDRSLWEISGHWGWYKENMFKVIPVAENSDHGNVYALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + L R E G+MR R F DA+ F + + + Sbjct: 351 KHGLKSYRDLPIRLAEFGLVHRYEPSGSLHGLMRVRGFTQDDAHIFCTDEQLADECLSIN 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L + G K I ++ + P S A++ M+ + + T Sbjct: 411 -DLILSTYADFGFKEISLKLSTRPEKRVGSDALWDHAES----------IMESVLKTIET 459 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 F I SI+ A Y + L D++ + I+ FG Sbjct: 460 KFAGQIK-TSILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQIDFNLPERFG------ 509 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + D + + G+M ++ + G +W ++ Sbjct: 510 --AFYIDKDSEKRQPVMIHRAIFGSMERFLGILIENFAGHMPLWLAPEQVVVATIT---- 563 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + +KI A+L +G D E+I + L P+ ++ G + + V Sbjct: 564 --SEANEYAQKITAKLRAIGLSATIDLRNEKINYKIREHSLQKVPVILVCGKREAETNSV 621 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + + +S+E+VI S+ Sbjct: 622 NMRRLGSTNKTLLSVEDVIKQLSNE 646 >gi|119774298|ref|YP_927038.1| prolyl-tRNA synthetase [Shewanella amazonensis SB2B] gi|152016599|sp|A1S4R2|SYP_SHEAM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|119766798|gb|ABL99368.1| prolyl-tRNA synthetase [Shewanella amazonensis SB2B] Length = 572 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 135/306 (44%), Positives = 182/306 (59%), Gaps = 5/306 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YS+LP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVVSHQLMLRAGMIRRNASGLYSYLPTGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q DLWVE+GR+D +G E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MNKAGAIEILMPMVQPGDLWVETGRWDQFGPELLRFTDRHNRDFVLGPTHEEVITDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREFLMKDAYSF LT E +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHLTQETLDETYQAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R+GL P+ A++G IGG +SHEF VLA +GE + D+ E + Sbjct: 181 YSNIFSRMGLAFRPVLADTGSIGGSVSHEFHVLAQSGEDLIAY-STGSDYAANIEKAEAP 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + T D N K L E V+ I T+ + ++ Sbjct: 240 ----LPTEPRGEATEALRTVDTPNAKTIAELVEQFGVAIEKTIKTLIVKGATEEAPLVAL 295 Query: 301 TFKGAD 306 +G Sbjct: 296 LVRGDH 301 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 113/207 (54%), Gaps = 3/207 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLP 297 +D I + P +D+ N ++ P+ K A RGIEVGHIF G KYS Sbjct: 364 EDGKHFFGINWERDLPLVQGADIRNVVEGEATPDGKGTYAFARGIEVGHIFQLGNKYSEA 423 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA- 356 M+AT +GK + MG YG+G R+VAA IE ++D +GI+WP+++APF + ++ + Sbjct: 424 MNATVLDENGKSQIMLMGCYGVGVSRIVAAAIEQNNDERGIVWPEAIAPFTVGILPMNMH 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D E +Y L++ G +V +DD E+ G FA +LLG P V++G + + Sbjct: 484 KSHRVTDTAEALYKELTEAGFEVLFDDRKERPGVMFADMELLGIPHTVVIGDRNIDTGVY 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K+R TG + ++ E++++ +F Sbjct: 544 EYKNRRTGEKTEVPFAELVSFLKAQFQ 570 >gi|329724705|gb|EGG61211.1| threonine--tRNA ligase [Staphylococcus epidermidis VCU144] Length = 645 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 151/444 (34%), Gaps = 31/444 (6%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD L L T G+ WLP G + I +++ Sbjct: 229 KAHLKMLEERRERDHRKIGKDLELFTNN-QLVGAGLPLWLPNGATIRREIERYIVDKEVS 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHI 122 G + P L + DL+ SG +D Y ++M ++ M+ P + I+++ Sbjct: 288 MGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPAMKLDEDEAMVLRPMNCPHHMMIYKNKP 347 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ R E ++ + + + P+ K + ++ Sbjct: 348 HSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQ 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G K R + D E + D++ Sbjct: 408 DVYKDFGFKDYRFRLS-----YRDPEDKHKYFDDDEM--------WEKAESMLKEASDEL 454 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y DV ++ ++ + + +S ++ F ++ T+ Sbjct: 455 GLTYEEAIGEAAFYGPKLDV---QVKTAMGKEETLSTAQLD----FLLPERFD----LTY 503 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG+ H + G+ + + + +I +N+ H Sbjct: 504 IGQDGEQHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPMQVEIIPVNVDLH----Y 559 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D + L G V DD E++G + A + P Q++VG + V + +V ++ Sbjct: 560 DYARLLQDELKSQGVRVEIDDRNEKMGYKIREAQMKKIPYQIVVGDQEVENQEVNVRKYG 619 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 + +E + +E I + Sbjct: 620 SEKQESVEKDEFIWNVIDEIRLKK 643 >gi|73662391|ref|YP_301172.1| threonyl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123761534|sp|Q49YB4|SYT_STAS1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|72494906|dbj|BAE18227.1| threonyl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 645 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 77/446 (17%), Positives = 156/446 (34%), Gaps = 33/446 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD +L L + G+ WLP G + I +++ Sbjct: 229 KAHLQMLEERKERDHRKIGKELELFSNNPL-VGAGLPLWLPNGATIRREIERYIVDKEVS 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHI 122 G + P + + DL+ SG +D Y ++M ++ M+ P + I+ + Sbjct: 288 MGYDHVYTPVMANVDLYKTSGHWDHYQEDMFPTMKLDEYEEMVLRPMNCPHHMMIYANKP 347 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ R E ++ + + + P+ K + ++ + Sbjct: 348 HSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDAHIFVRPDQIKEEFKRVVNLII 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDD 241 +++ ++ R D + + + D M S D+ Sbjct: 408 DVYNDFNFENYSFRLS--------------YRDPEDKEKYFDDDEMWIKAESMLKEAVDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y DV ++ ++ + + +S ++ F K+ T Sbjct: 454 LGLDYEEAIGEAAFYGPKLDV---QVQTAMGKEETLSTAQLD----FLLPQKF----ELT 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + G DG+ H + G+ + + + +I +N+ H Sbjct: 503 YIGNDGEQHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPKQVEIIPVNVDLH---- 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D I L G V DD E++G + A + P Q++VG K V + +V ++ Sbjct: 559 YDYARLIQDELKSQGVRVEIDDRNEKMGYKIREAQMQKIPYQLVVGDKEVENKEVNVRKY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNNRP 447 + +E + +E I + Sbjct: 619 GSQDQETLEKDEFIWNLVDEIRLKKQ 644 >gi|209521097|ref|ZP_03269827.1| prolyl-tRNA synthetase [Burkholderia sp. H160] gi|209498480|gb|EDZ98605.1| prolyl-tRNA synthetase [Burkholderia sp. H160] Length = 578 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 135/277 (48%), Positives = 178/277 (64%), Gaps = 5/277 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIISHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR G IE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGGIELLMPAVQPAELWQESGRWEKYGPELLRFKDRKQADFVMGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQIQ KFRDE+RPRFGVMR REF+MKD+YSFD EG + SY KM+ + Sbjct: 121 QIKSYRQLPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDSYSFDKDAEGLRESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y+RIF RLGL+ + A++G IGG SHEF V+AD GE + DF E D Sbjct: 181 YVRIFTRLGLEFRAVAADNGSIGGSGSHEFHVIADIGEDAIAYCPT-SDFAANVEAADAL 239 Query: 240 ---DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + +++ P A + E L L Sbjct: 240 PLIAQRAAPAEDMKKTATPGKAKCEAVAELLNIPLER 276 Score = 176 bits (446), Expect = 7e-42, Method: Composition-based stats. Identities = 72/192 (37%), Positives = 105/192 (54%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K V RGIEVGH+F GTKYS M+AT GK + Sbjct: 382 PEPVVADIRNVKKGDPSPDGKGVLDICRGIEVGHVFQLGTKYSEAMNATCLDETGKPRPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 +MG YGIG R++ A IE + D KGIIWP+S+APF++ L + R+ +K+YA Sbjct: 442 EMGCYGIGITRILGAAIEQNFDEKGIIWPESIAPFEVVLCPMGYDRSDAVREQADKLYAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD GE+ G FA +L+G P ++++G + + D K+E + R + + Sbjct: 502 LVAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGDRGLKDGKIEYQGRRDTEATLLPV 561 Query: 432 EEVINYASHRFS 443 E+ + Sbjct: 562 EDAAQTVIDKVR 573 >gi|33152900|ref|NP_874253.1| prolyl-tRNA synthetase [Haemophilus ducreyi 35000HP] gi|81836009|sp|Q7VKI5|SYP_HAEDU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|33149125|gb|AAP96642.1| prolyl-tRNA synthetase [Haemophilus ducreyi 35000HP] Length = 571 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 126/250 (50%), Positives = 161/250 (64%), Gaps = 1/250 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVISHQLMLRAGMIRPTAAGLYNWLPTGVKILKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ES R++ YG E+LR ADR + + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEILMPVVQPAELWQESSRWEQYGPELLRFADRGKRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF TPE + +Y M+ Sbjct: 121 ELSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHTTPESLQQTYEVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL ++A++G IGG SHEF VLA +GE + DF E + Sbjct: 181 YHRIFTRLGLDFRTVQADTGSIGGSASHEFQVLASSGEDDIVF-STESDFAANIELAEAV 239 Query: 241 DIISLNSIVE 250 + E Sbjct: 240 AMGESKPATE 249 Score = 176 bits (446), Expect = 7e-42, Method: Composition-based stats. Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 4/187 (2%) Query: 261 DVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N + D P+ + + RGIEVGHIF G KYS M+AT +G DGK + MG YG Sbjct: 384 DLRNVVVGDPSPDGRGILLIKRGIEVGHIFQLGQKYSAAMNATVQGEDGKPLVMTMGCYG 443 Query: 319 IGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKVG 376 IG RVVAA IE HD + I D +APF ++++ + + E++Y L G Sbjct: 444 IGVTRVVAAAIEQHHDERGIIWPTDEIAPFTVAIVPMNMFKSASVQAFAEQLYTDLMAQG 503 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD E+ G FA +L+G P +++G K + + +VE K+R TG + ++ ++++ Sbjct: 504 VDVILDDRKERPGVMFADMELIGVPHMIVIGEKNLENGEVEYKNRRTGEKTMIAKDQLLA 563 Query: 437 YASHRFS 443 Y + Sbjct: 564 YLAQNVR 570 >gi|198275235|ref|ZP_03207766.1| hypothetical protein BACPLE_01394 [Bacteroides plebeius DSM 17135] gi|198271818|gb|EDY96088.1| hypothetical protein BACPLE_01394 [Bacteroides plebeius DSM 17135] Length = 646 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 152/445 (34%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L KG+ WLP G + +R Q R Sbjct: 230 EYLVMLEEAKKRDHRKIGKEMDLFM-FSDTVGKGLPMWLPKGTALRIRLQDFLRRIQARY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + L+V SG Y YGK+ + + P + I+++ Sbjct: 289 DYQEVMCPPIGNKLLYVTSGHYAKYGKDAFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP + R E G+ R R F DA+ F + + ++ Sbjct: 349 RSYRDLPLRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDE-FLRVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F +GL++ + D + + D + + Sbjct: 408 SIVFTSMGLENFEAQISLR--------------DKENREKYIGSDENWEKAEQAIVEACE 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + VE A Y D + D++ ++ ++ Sbjct: 454 EKGLKAKVEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFQL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G+D + H + G+M AV+ GK +W + I + Sbjct: 503 EYMGSDNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LTPDQVAILPISE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D +K+ L K DD E+IG + ++ P +IVG K + +V ++ Sbjct: 557 KFNDYADKVRMELKKYDVRALVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVAVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M +EE + N Sbjct: 617 KQGEGDKGTMKIEEFAKNIAEEVHN 641 >gi|89891844|ref|ZP_01203345.1| threonyl-tRNA synthetase [Flavobacteria bacterium BBFL7] gi|89515749|gb|EAS18550.1| threonyl-tRNA synthetase [Flavobacteria bacterium BBFL7] Length = 648 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 78/436 (17%), Positives = 153/436 (35%), Gaps = 36/436 (8%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L T + +G+ WLP G + + +++ Q + G + P Sbjct: 238 AKKRDHRKLGKELQLFT-FSQRVGQGLPLWLPKGAALRERLEDFLKKAQKKAGYEMVVSP 296 Query: 73 TLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 + S +L+V SG Y+ YG + + +D+ + P + +I++S SYR+LP Sbjct: 297 HIGSKELYVTSGHYEKYGADSFQPIKTPSDDEEFLLKPMNCPHHCEIYKSSQWSYRDLPK 356 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F + +R E G+ R R F DA+ F + + K + + L +F LG Sbjct: 357 RFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCMPEQLDKE-FKAVIDLVLYVFGSLG 415 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 ++ + + + + + + D I Sbjct: 416 FENFTAQVS-------------IRDPKKPEKYIGDTKNWEIAENAIISAAKDKGLDYVIE 462 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 E A Y D + D+L + ++ ++ +KGAD + Sbjct: 463 EGEAAFYGPKLDFM---VKDALGRSWQLGTIQVDYNLP--------ERFDLWYKGADNES 511 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 H + G+M A++ G +W +SL + + +++ Sbjct: 512 HRPVMIHRAPFGSMERFIAILLEHTGGNFPLWLMPEQCTILSL------SEKYENYAKQV 565 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 L D+ E +G + A++ P +IVG + D + ++ Sbjct: 566 ANSLENNEIRTTIDNRAETMGKKIREAEMNKLPYMLIVGEQEEKDGTISVRKHGGDDLGS 625 Query: 429 MSLEEVINYASHRFSN 444 MS+E ++ Sbjct: 626 MSVETFSQLIKDEIAS 641 >gi|222151594|ref|YP_002560750.1| threonyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402] gi|222120719|dbj|BAH18054.1| threonyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402] Length = 642 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 78/447 (17%), Positives = 167/447 (37%), Gaps = 32/447 (7%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K L IL+E RD +L L T G+ WLP G + I ++ Sbjct: 226 KALKEHLKILEERKERDHRKIGKELELFTT-SQLVGAGLPLWLPNGATIRRELERYIVDK 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G + P + S DL+ SG +D Y ++M + ++A++ P + ++++ Sbjct: 285 EVALGYDHVYTPIMGSVDLYKTSGHWDHYQEDMFPPMEMENEALVLRPMNCPHHMMVYKN 344 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SYR LP ++ + R E ++ + + + P+ K + ++ Sbjct: 345 KPHSYRELPIRIAELGMMHRYEASGAVSGLQRVRGMTLNDAHIFVRPDQIKEEFIRVVQL 404 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDF 239 + ++ K R D+ +T+ + D + Sbjct: 405 VIDVYKDFKFKEYKFRLS--------------YRDSEDTEKYFQDDEMWERAQLMLKEAV 450 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D++ A Y DV ++ +L + + +S ++ F ++ Sbjct: 451 DEMGLDYEEAPGEAAFYGPKLDV---QVKTALGKEETLSTVQLD----FLLPERFD---- 499 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G+DG+ H + G + + + + +P +AP ++ +I + ++ Sbjct: 500 LEYIGSDGEKHRPVVIHR--GVISTMERFVAFLTEEYKGAYPLWLAPNQLEIIPV--SNE 555 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 V D K+Y L G DD E++G + A + P QV+VG K + +++V ++ Sbjct: 556 VHYDYARKLYDELKSQGVRCHIDDREEKMGYKIREAQMHKVPYQVVVGDKEIENNEVNVR 615 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + + ++ I + Sbjct: 616 QYGKKESKTIDRDDFIWSIVDEIRLKK 642 >gi|167042805|gb|ABZ07523.1| putative tRNA synthetase class II core domain (G, H, P, S and T) [uncultured marine microorganism HF4000_ANIW137I15] Length = 627 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 84/444 (18%), Positives = 150/444 (33%), Gaps = 37/444 (8%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD + +L L Q G+ WLP G + +E R G Sbjct: 217 LAHLEEARRRDHRVLGKELGLFLIH-EQAGSGLVYWLPHGAVLRKVIERFWEDEHVRRGY 275 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + +P L + L+ SG YD Y + M L + + + + P + I+++ +SYR Sbjct: 276 ELVVIPHLVHSRLFRTSGHYDFYKENMFTL-EVDGEEYVAKPMNCPGHILIYQNERRSYR 334 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + ++ +R+E G++R R F DA+ F + + L + Sbjct: 335 DLPIRYAEMGTVYRNERSGVLHGMLRVRGFTQDDAHIFCTPEQLPGE-ILGVLDMTLFML 393 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G + + V + S D S D+ Sbjct: 394 ATFGFERFEIELS-------------VRDPAHPEKYAGSDDEWKAAEASLVQALDERSLP 440 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E Y DV K+ D+L + S + F ++ + GA Sbjct: 441 YRRCEGEAVFYGPKIDV---KIVDALGRGWQASTIQFD----FNLPRRFD----LKYVGA 489 Query: 306 DGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG H M + R V A+IE + + + D Sbjct: 490 DGDFHTPYMVHRALLGSLERFVGALIEHTAGAFPLWLSPVQVKVLPIT-------ERNHD 542 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ A L + G V DD E++G + L P +++G + +V ++ R Sbjct: 543 HARRVAASLKESGLRVDVDDRNEKLGYKIRQGRLERTPYLLVIGDREQESQQVAVRDRTE 602 Query: 424 GIREDMSLEEVINYASHRFSNNRP 447 G M L+ ++ + P Sbjct: 603 GNLGAMGLDAFLDRVQPEMAPRTP 626 >gi|159028099|emb|CAO87176.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 618 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 74/443 (16%), Positives = 152/443 (34%), Gaps = 38/443 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNR 63 Y + RD KL L + I + G+ W P G + R+ Sbjct: 209 NYLQQKEEAQRRDHRKLGQKLKLFS--IQEDAGGGLVFWHPRGATMRYLIEDYWRQAHLE 266 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P L + DLW SG +D Y M + ++ P + +++ + Sbjct: 267 AGYQFLYTPHLANLDLWKTSGHWDFYRDNMFEAIELEQQSYQIKPMNCPFHVLTYQNDLH 326 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR P + ++ +R E G+MR R F DA+ F L + + + Sbjct: 327 SYREFPLRWAELGTVYRYERSGVLHGLMRVRGFTQDDAHIFCLPEQIAAE-ILGVLNLTE 385 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +I G + + + P S + + + Sbjct: 386 KILSDFGFTNYQINLSTRPSKS-----------------VGSDSVWELATAALIEALNAK 428 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y D+ K+ D++ + S ++ F ++ + A Sbjct: 429 KWDYIEDQGGGAFYGPKIDI---KIQDAIGRMWQCSTIQVD----FNLPERFDMQYVAR- 480 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 ++ + + G++ ++ + +P +AP ++ L+ + + Sbjct: 481 --DGSRERPIMIHRAIFGSLERFFGILI---ENYAGDFPLWLAPIQVRLLPV---SDEQQ 532 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 ++ +L + G V D GE++G Q +L P+ ++G + VS + I+ R Sbjct: 533 HYALEVAVQLKQAGYRVEIDKSGERLGKQIRTGELEKIPVLAVIGKREVSSKTLSIRTRQ 592 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 G M+L +++ + Sbjct: 593 GGDLGSMTLADLLEKMQTAILSK 615 >gi|52628042|gb|AAU26783.1| prolyl-tRNA synthase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 589 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 134/398 (33%), Positives = 205/398 (51%), Gaps = 21/398 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FL +E P DAEIASH+LMLR+GMI + G+Y+W+PLG + L V I+REE Sbjct: 21 MRASQWFLVTQKETPNDAEIASHQLMLRSGMIRKLGSGLYTWMPLGLRVLRKVENIVREE 80 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+T A+E+ +P++Q A+LW E+GR++++G ++L + D N + +GPTHEEV+TDI R+ Sbjct: 81 MNKTHAMELLMPSVQPAELWQETGRWETFGGQLLTMKDSNQREYCFGPTHEEVITDIMRN 140 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L+ E + +Y M+ + Sbjct: 141 ELQSYKQLPVNFYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHLSLESLQETYKDMYQA 200 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GLK + A++G IGG SHEF VLA++GE +F S + T Sbjct: 201 YCRIFDRMGLKYRAVEADTGAIGGSASHEFQVLAESGEDLIFYSDASDYAANIEQATSLK 260 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + E T D N+K D + +++ I + + Sbjct: 261 PLKANQPCNETIT-----LVDTPNQKTIDEVASFLGIASNQTIKTLIVKGKEHPMVALVL 315 Query: 301 TFKGADGKDHYVQM-----------GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 + ++ + ++ I +I Sbjct: 316 RGDDELNEVKAIKHPLVHAPLSFIDEELILKTLKTPLGSIGPIQLNIPVIVDHHALAMPS 375 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 + D+ +A + D +D + Sbjct: 376 FVCGANQADKHFINAAWE-----RDAKYDDAYDLRNVK 408 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 109/197 (55%), Gaps = 3/197 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A Y D+ N K D P+ K RGIEVGH+F G KY+ M+A+ G+ Sbjct: 393 ERDAKYDDAYDLRNVKEGDPSPDGKGTLHCCRGIEVGHVFQLGDKYAKAMNASVINEQGQ 452 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 + MG YG+G RVVAA IE HD GIIWP ++APF++++I + A Q ++ E Sbjct: 453 LQTMIMGCYGLGITRVVAAAIEQHHDEHGIIWPQALAPFQVNIIPLNGARSQAVKEQAES 512 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +Y +L G DV DD E+ G FA DL+G P +++V + + VE K R++ + Sbjct: 513 LYQQLKSHGIDVLLDDRNERAGVLFADNDLIGIPHRLVVSERNLEQGCVEYKARISSETQ 572 Query: 428 DMSLEEVINYASHRFSN 444 ++L++V+N+ + Sbjct: 573 LINLDKVVNFIIELINK 589 >gi|110638045|ref|YP_678253.1| threonyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406] gi|123354610|sp|Q11UK3|SYT_CYTH3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|110280726|gb|ABG58912.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Cytophaga hutchinsonii ATCC 33406] Length = 645 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 86/444 (19%), Positives = 162/444 (36%), Gaps = 39/444 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L IL+E RD +L L + G+ WLP G + + +++ Q R G Sbjct: 231 YLTILEEAKKRDHRKLGKELELFA-FSEKVGMGLPLWLPKGALLRERLENFLKKAQVRAG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHIK 123 + P + + L+V SG +D YGK+ + + + P + +I+++ + Sbjct: 290 YQPVVTPHIGNKQLYVTSGHFDKYGKDSFQPIFTPHEGEQFLLKPMNCPHHCEIYKTKPR 349 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP F + +R E G+ R R F DA+ F P+ K + K+ L Sbjct: 350 SYKDLPIRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCR-PDQVKEEFLKVIDLVL 408 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +F LG + D + +D + Sbjct: 409 YVFKVLGFNDYTAQISLR--------------DPENKDKYIGEDEQWQKAEQAIIEASAE 454 Query: 243 ISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 L+++ E A Y D + D+L ++ ++ ++ Sbjct: 455 KGLSTVTELGEAAFYGPKLDFM---VKDALGRKWQLGTIQVDY----QLPNRF----ELE 503 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G+D + H + G++ AV+ G +W I I + Sbjct: 504 YTGSDNQKHRPVMLHRAPFGSLERFIAVLIEHVAGNFPLW------LSPDQIAILPISEK 557 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D + +Y RL F D+ E+IG + ++ P +++G K V++ K+ I+ Sbjct: 558 FNDYAQDVYDRLLVKDIRGFIDNRDEKIGKKIRDTEVKKVPFMLVIGEKEVNEGKIAIRK 617 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 M +E+ I Y + Sbjct: 618 HGGEDLGSMLVEDFIQYFESEIAK 641 >gi|255994452|ref|ZP_05427587.1| threonine--tRNA ligase [Eubacterium saphenum ATCC 49989] gi|255993165|gb|EEU03254.1| threonine--tRNA ligase [Eubacterium saphenum ATCC 49989] Length = 581 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 85/445 (19%), Positives = 149/445 (33%), Gaps = 43/445 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD ++ L M + G +LP G + R+E + Sbjct: 176 EYIDRIEEAKKRDHRKIGKEMDLFALM--EEGPGFPFFLPNGMILRTELENYWRQEHRKR 233 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + S +LW SG YD Y + M +D P + ++ + S Sbjct: 234 GYDEIKTPLILSEELWHTSGHYDHYKENM-YFTSIDDAEYAIKPMNCPGAMLTYKRKLYS 292 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+ P ++ R EL G+MR R F DA+ F +TP+ K ++ Sbjct: 293 YRDFPIRLAELGQVHRHELHGALHGLMRVRTFTQDDAHIF-MTPDIVKDEIKRVVSFIDD 351 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 +++ G K + P + E + I S ++ Sbjct: 352 VYNLFGFKYHI-ELSTRPEDSMGTDE-----------------EWNHAIDSLEAAIKEMG 393 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E A Y D H E DSL + ++ F K+ T+ Sbjct: 394 KDYVINEGDGAFYGPKLDFHLE---DSLGRTWQCGTIQLD----FQMPQKFD----LTYV 442 Query: 304 GADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G+DG+ H + I R + +IE + + Sbjct: 443 GSDGEKHRPIIIHRVIFGSIERFIGILIEHFAGKFPLWLAPEQVRLLTVT-------EKF 495 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 EK+ L+K G V D E+IG + ++G + + ++ Sbjct: 496 VPYAEKVSKELAKHGIRVKVDARNEKIGYKLRQGRNERVSYLAVIGEREAEADTLSVRSS 555 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 G +S+++ I+ + + Sbjct: 556 KEGDLGSLSIDKFIDALCDEIATKK 580 >gi|302879510|ref|YP_003848074.1| prolyl-tRNA synthetase [Gallionella capsiferriformans ES-2] gi|302582299|gb|ADL56310.1| prolyl-tRNA synthetase [Gallionella capsiferriformans ES-2] Length = 569 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 131/301 (43%), Positives = 183/301 (60%), Gaps = 4/301 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ L+E P +AE+ SH LM+R G I + + G+Y+W+PLG +AL V AI+REE Sbjct: 1 MRVSQFFISTLKEAPSEAELPSHILMMRAGYIRKLASGLYTWMPLGLRALRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N +GAIE+ +P +Q A+LW E+GR++ +G +ML++ DR++ +GPTHEEV+TDI R Sbjct: 61 MNNSGAIELLMPAVQPAELWDETGRWEVFGPQMLKIKDRHNNQFCFGPTHEEVITDIARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF + + +Y M+ + Sbjct: 121 EIRSYRQLPVNFYQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHADFDSLEQTYAVMYQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS---KDFMDFPIPSENT 237 Y RIF RLGLK + A++G IGG SHEF VLAD+GE + + + T Sbjct: 181 YSRIFTRLGLKFRAVAADTGAIGGSGSHEFHVLADSGEDALAYCPNSSYAANVELAEAVT 240 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN-KRVSARGIEVGHIFYFGTKYSL 296 + + P T + E L L K ++ + HI +SL Sbjct: 241 PDSPRAAPAEALRNVDTPKQTTCEQVAELLGIPLQRTVKLLALVANDQLHIILLRGDHSL 300 Query: 297 P 297 Sbjct: 301 N 301 Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 67/187 (35%), Positives = 103/187 (55%), Gaps = 3/187 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGHIF TKY+ M ATF A GK ++MG Sbjct: 383 VADIRNVVTGDISPDGKGTLEICRGIEVGHIFQLRTKYAADMKATFLDAQGKAQTLEMGC 442 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKV 375 YGIG R+VAA IE +HD +GI P ++APF+++L+ I + R A E++YA L Sbjct: 443 YGIGVSRIVAAAIEQNHDPRGITLPAAIAPFQVALVPIGMNKSEAVRAAAEQLYAELKAS 502 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +V +DD E+ G FA +L+G P +++VG + + + +E + R + L+ + Sbjct: 503 DIEVLFDDRDERPGVMFADMELIGIPHRIVVGDRGLKEGLIEYQGRRDDAALSIPLQNAL 562 Query: 436 NYASHRF 442 + + Sbjct: 563 EFIQSKL 569 >gi|163854968|ref|YP_001629266.1| prolyl-tRNA synthetase [Bordetella petrii DSM 12804] gi|226699121|sp|A9I4I5|SYP_BORPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|163258696|emb|CAP40995.1| proS [Bordetella petrii] Length = 576 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 120/224 (53%), Positives = 160/224 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P +AE+ASH+LM R GMI + + GIY+++PLG K + + AI+R E Sbjct: 1 MRASTYHLNTLKEAPAEAEVASHRLMTRAGMIRKLAGGIYTYMPLGLKVIRKIEAIVRAE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE+ +P +Q A+LW ESGR++ YG E+LR+ DR+ + + PT EEV+TDI R+ Sbjct: 61 MDAAGAIELLMPVVQPAELWQESGRWEQYGAELLRIKDRHQRDFVLQPTSEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD G++ SY+KM+ + Sbjct: 121 EIHSYRQLPLNFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDEAGAQQSYDKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y+RIF RLGL+ + A++G IGG SHEF V+ADTGE + + Sbjct: 181 YMRIFERLGLQFRAVAADTGSIGGSRSHEFQVIADTGEDLLVYN 224 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 99/189 (52%), Gaps = 3/189 (1%) Query: 259 TSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + RGIEVGH+F+ GTKYS + ATF GK +QMG Sbjct: 387 VADLRNVVEGDPAPDGAGRLAIQRGIEVGHVFFLGTKYSEALKATFLDETGKPALLQMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+ A IE +HD +GIIWP ++APF++ + + ++ R+ K+Y L Sbjct: 447 YGIGITRIAGAAIEQNHDERGIIWPRAIAPFEVVICPVGWGKNETVRNESVKLYDALRAR 506 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD + G FA +L+G PL+V VG + ++D VE++ R + + Sbjct: 507 GVDVILDDRDARPGVMFAEWELIGVPLRVTVGERGLNDGVVELQARRESTAAKIPAGSAL 566 Query: 436 NYASHRFSN 444 + Sbjct: 567 EQVLAKLET 575 >gi|290473678|ref|YP_003466550.1| proline tRNA synthetase [Xenorhabdus bovienii SS-2004] gi|289172983|emb|CBJ79754.1| proline tRNA synthetase [Xenorhabdus bovienii SS-2004] Length = 573 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 128/278 (46%), Positives = 175/278 (62%), Gaps = 18/278 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SHKLMLR GM + + G+Y+W+P G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVVSHKLMLRAGMTRKLASGLYNWMPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR + + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFEDRGARPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + E + +Y+KM+ + Sbjct: 121 EVTSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQESLQETYDKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC---------------SK 225 Y +IF R+GL + A++G IGG SHEF VLAD+GE + Sbjct: 181 YSKIFTRIGLDFRAVLADTGSIGGSASHEFQVLADSGEDDIAFSTESNYAANIELAEAVM 240 Query: 226 DFMDFPIPSENTDF---DDIISLNSIVEQWTAPYAATS 260 + +PSE+ + ++ +VEQ+ P T Sbjct: 241 PSHERAVPSEDMHLVETPNAKTIAELVEQFNLPIEKTV 278 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 78/208 (37%), Positives = 119/208 (57%), Gaps = 3/208 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D I + P +D+ N D+ P+ + + RGIEVGHIF GTKYS + Sbjct: 366 DDKHYFGINWERDLPLPEIADIRNVLEGDASPDGQGTLLIKRGIEVGHIFQLGTKYSDAL 425 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 AT + DG + V MG YGIG R+VAA IE +HD +GIIWPD++APF+++L+ + H Sbjct: 426 KATVQNEDGHNQVVSMGCYGIGVTRIVAAAIEQNHDDRGIIWPDAIAPFQVALLPMNMHK 485 Query: 359 QV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 ++ EK+YA L G DV +DD E+ G FA +L+G P +++G + + + +VE Sbjct: 486 SYRVKEVAEKLYADLRANGIDVIFDDRKERPGVMFADMELIGVPHTLVIGDRNLDNGEVE 545 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 K+R G ++ + LE +I Y + + Sbjct: 546 YKYRRNGDKQMLKLEGIIEYLKEQIKQH 573 >gi|187925415|ref|YP_001897057.1| prolyl-tRNA synthetase [Burkholderia phytofirmans PsJN] gi|226699128|sp|B2SYU8|SYP_BURPP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|187716609|gb|ACD17833.1| prolyl-tRNA synthetase [Burkholderia phytofirmans PsJN] Length = 578 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 135/288 (46%), Positives = 182/288 (63%), Gaps = 5/288 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR G IE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ Sbjct: 61 MNRAGGIELLMPAVQPAELWQESGRWEKYGPELLRFKDRRQSDFVIGPTHEEVVTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD +G + SY KM+ + Sbjct: 121 QIKSYRQLPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDMDGLRESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD-- 238 Y+RIF RLGL + A++G IGG SHEF V+A+TGE + DF E + Sbjct: 181 YVRIFTRLGLDFRAVAADNGSIGGSGSHEFHVIAETGEDAIAYCPT-SDFAANVEAAEAL 239 Query: 239 --FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 + + + +++ P A + E L L + E Sbjct: 240 PLYAERAAPTEEMKKTPTPGKAKCEAVAELLNIPLERTIKSIILATEN 287 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 71/192 (36%), Positives = 105/192 (54%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K V RGIEVGH+F GTKYS M AT GK + Sbjct: 382 PEPVVADIRNVKKGDPSPDGKGVLDICRGIEVGHVFQLGTKYSEAMGATCLDETGKPRPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 +MG YGIG R++ A IE + D KGIIWP+S+APF++ L + + R +K+YA Sbjct: 442 EMGCYGIGVTRILGAAIEQNFDDKGIIWPESIAPFEVVLCPMGYDRSEAVRAEADKLYAA 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L + G DV DD GE+ G FA +L+G P ++++G + + + K+E + R + + Sbjct: 502 LVEAGIDVILDDRGERPGVMFADWELIGVPHRLVIGDRGLKEGKLEYQGRRDAEATLLPV 561 Query: 432 EEVINYASHRFS 443 E+ + Sbjct: 562 EDAAQTVIGKVR 573 >gi|218886086|ref|YP_002435407.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226701453|sp|B8DPN2|SYT_DESVM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|218757040|gb|ACL07939.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 644 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 82/435 (18%), Positives = 151/435 (34%), Gaps = 41/435 (9%) Query: 8 LPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L ++E R D +L L + G+ W P G + +R+E + G Sbjct: 231 LHQIEEAKRRDHRKLGQQLDLFAFH-EDVAPGMVYWHPKGMLLRTILEDFLRKEHLKRGY 289 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L ++W +SG YD+Y + M +D A P + I++SH++SYR Sbjct: 290 ELVQGPQLLRREVWEKSGHYDNYRENM-YFTVIDDNAYGVKPMNCVSHMLIYKSHLRSYR 348 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP +++ + R E G++R R+F DA+ + Sbjct: 349 DLPRRMFELGVVHRHEKSGVLHGLLRVRQFTQDDAHILCRPDQLEAEII----------- 397 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + A + G ++ ++ T + S + D + Sbjct: 398 --------GVIALVRDLMGLFGFDYRIVISTRPEKSIGSDEDWDRATNALIGAVATAGLS 449 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 ++I E A Y D+ K+ D++ ++S ++ F ++ + G Sbjct: 450 HTINEGDGAFYGPKIDI---KVTDAIGREWQLSTIQVD----FTLPDRFD----LVYIGQ 498 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H + +G++ V+ G W + D Sbjct: 499 DGERHRPVMVHRAILGSLERFIGVLTEHFAGAFPTW------IVPVQARLLTVTDAQNDF 552 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +L G V D E++G + A L P ++VG K V V ++ R Sbjct: 553 AMGARDQLVAAGLRVEADTRNEKLGYKVREAQLEKIPYILVVGDKEVEAGGVNVRLRNGE 612 Query: 425 IREDMSLEEVINYAS 439 +L EV Sbjct: 613 NLGLKTLAEVAEMIR 627 >gi|254374591|ref|ZP_04990072.1| threonyl-tRNA synthetase [Francisella novicida GA99-3548] gi|151572310|gb|EDN37964.1| threonyl-tRNA synthetase [Francisella novicida GA99-3548] Length = 634 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 143/442 (32%), Gaps = 41/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD L L + S GI W G + V +R N+ G Sbjct: 230 YLNMLEEAEKRDHRKIGKVLDLF--HFQEDSPGIAFWHDNGVRIWRQVEDYMRASNNKYG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG Y + M ++ P + ++ + + SY Sbjct: 288 CSEIRTPLIADFSLWQKSGHASKYAENMF-ATKSENRDFAIRPMNCPTCVQVYNTKLHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G++R R F D + F + + + + Sbjct: 347 RDLPIRIAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEV- 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++ P E D D Sbjct: 406 YKDFGFNDFAVKIALRPENRIGDDE-----------------TWDKSEQMLKNALDANNV 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ A Y + H L D++ + + ++ G AT+ Sbjct: 449 SYELLPGEGAFYGPKIEFH---LKDAIGRSWQCGTIQLDFSMPQRLG--------ATYID 497 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G+ V + +G++ ++ + G +W V + + N D Sbjct: 498 KNGEKQVPVMLHRAIVGSLERFIGMLIEHYAGNLPLWLAPVQVAVMGISN------NQDD 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C++++ L K G D E+IG + LL P VI+G + I+ Sbjct: 552 YCKEVFTMLEKNGIRAKLDLRNEKIGFKIREHTLLRVPYLVILGKNEQEQKIITIRKHSG 611 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS+ + + + Sbjct: 612 EDLGQMSVYDFCAFLDKQIQAK 633 >gi|255320540|ref|ZP_05361720.1| prolyl-tRNA synthetase [Acinetobacter radioresistens SK82] gi|262379097|ref|ZP_06072253.1| prolyl-tRNA synthetase [Acinetobacter radioresistens SH164] gi|255302390|gb|EET81627.1| prolyl-tRNA synthetase [Acinetobacter radioresistens SK82] gi|262298554|gb|EEY86467.1| prolyl-tRNA synthetase [Acinetobacter radioresistens SH164] Length = 571 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 124/235 (52%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+Y+WLP+G + L+ V AI+REE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGVRVLNKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E +P Q A LW ESGRY YG E+LR DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNRAGALETFMPVTQPASLWEESGRYVQYGPELLRFNDRHTNPFVLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ + Sbjct: 121 ELKSYKQLPINFYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHVDQASLQETYDVMYET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P++A++G IGG SHEF VLA +GE + D+ E Sbjct: 181 YCRIFSRLGLDFRPVQADTGSIGGSGSHEFHVLASSGEDDIAF-STESDYAANIE 234 Score = 160 bits (404), Expect = 5e-37, Method: Composition-based stats. Identities = 67/193 (34%), Positives = 102/193 (52%), Gaps = 3/193 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A + D+ N D P+ K RGIEVGHIF G KYS + G DGK Sbjct: 379 ERDASFTEVYDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGKKYSEALGCKVLGEDGK 438 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEK 367 V MG YGIG RV+A+ IE ++D KGIIWP ++APF+++++ + A +A E Sbjct: 439 PLTVTMGCYGIGVTRVIASAIEQNYDEKGIIWPAAIAPFEVAIVPMNAHKSPRTLEAAEA 498 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +Y L G DV DD E+ G +F+ +L G P ++++G K + E K R Sbjct: 499 LYIELQAQGFDVLLDDRNERPGVKFSDLELTGIPHRIVIGEKGLDAGTFEYKGRTDIESV 558 Query: 428 DMSLEEVINYASH 440 +++ +E++ + Sbjct: 559 NINKDELLAKLAK 571 >gi|255531804|ref|YP_003092176.1| threonyl-tRNA synthetase [Pedobacter heparinus DSM 2366] gi|255344788|gb|ACU04114.1| threonyl-tRNA synthetase [Pedobacter heparinus DSM 2366] Length = 641 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 81/445 (18%), Positives = 156/445 (35%), Gaps = 38/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y I + RD +L L + G+ WLP G + + + Q Sbjct: 228 LTEYLHMIEEAKKRDHRKLGKELELFA-FSEKVGMGLPLWLPKGAALRERLVQFLTRAQA 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRS 120 + G ++ P + +L++ SG Y+ YGK+ + + + P + +I+++ Sbjct: 287 KAGYEQVVTPHIGHKNLYITSGHYEKYGKDAFQPIKTPQEGEEFFLKPMNCPHHCEIYKT 346 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SY++LP F + +R E G+ R R F DA+ F P+ K + K+ Sbjct: 347 KPRSYKDLPLRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCR-PDQVKEEFKKVID 405 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L +F LG + D + D + + Sbjct: 406 LVLYVFKSLGFDDYTAQVSLR--------------DPENKAKYIGSDENWRLAETAIIEA 451 Query: 240 DDIISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 D L ++VE A Y D + D+L ++ ++ Sbjct: 452 ADEKGLPTVVEYGEAAFYGPKLDFM---VKDALGRKWQLGTIQVDYNLP--------ERF 500 Query: 299 SATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + G+D + H + G++ AV+ G +W I Sbjct: 501 ELEYTGSDNQKHRPVMIHRAPFGSLERFIAVLIEHCAGNFPLW------LSPEQFIILPI 554 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + D +K+ L+ D E+IG + A++ P +I+G K +++ K Sbjct: 555 SEKYEDYAKKVSDELNNSDIRGLIDFRDEKIGRKIRDAEVKKIPYMLIIGEKEMAEGKAS 614 Query: 418 IKHRLTGIREDMSLEEVINYASHRF 442 ++ G +M+L+E Sbjct: 615 VRKHGEGDLGEMTLQEFSELLIKEI 639 >gi|332286931|ref|YP_004418842.1| prolyl-tRNA synthetase [Pusillimonas sp. T7-7] gi|330430884|gb|AEC22218.1| prolyl-tRNA synthetase [Pusillimonas sp. T7-7] Length = 577 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 120/276 (43%), Positives = 174/276 (63%), Gaps = 3/276 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SKY + L+E P +AE+ SH+LM R GMI + + GIY+++PLG K L + I+R+E Sbjct: 1 MHASKYHINTLKEAPAEAEVKSHQLMTRAGMIRKAAGGIYTYMPLGLKVLRKIENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GAIE+ +P +Q A+LWVESGR++ YG E+LR+ DR+ + + PT EEV+TDI R+ Sbjct: 61 MDQAGAIELLMPVVQPAELWVESGRWEQYGAELLRIKDRHQRDFVLQPTSEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I S+R LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD ++ SY+ M+ + Sbjct: 121 EIHSWRQLPLNFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDEASAQSSYDTMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS---KDFMDFPIPSENT 237 Y+RIF RLGL + A++G IGG SHEF V+ADTGE + + + + + Sbjct: 181 YMRIFQRLGLTFRAVAADTGSIGGSRSHEFQVIADTGEDLIVYNPNTQYAANIELAEAAC 240 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + + + + P A ++ ++L L + Sbjct: 241 LIPQRGAATETLNKTSTPDAPKCEIVAQQLGKPLSD 276 Score = 162 bits (411), Expect = 8e-38, Method: Composition-based stats. Identities = 71/192 (36%), Positives = 109/192 (56%), Gaps = 2/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV-SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 P A +D+ N D P+ ++ RGIEVGH+F+ G KYS ++ATF DGK +Q Sbjct: 385 PEATVADLRNVVAGDPDPQGGQLAIQRGIEVGHVFFLGDKYSKALNATFLETDGKPALLQ 444 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARL 372 MG YGIG R+ AA IE HD KGIIWP S+APF++ + + + R+ E++Y L Sbjct: 445 MGCYGIGISRIAAAAIEQCHDEKGIIWPKSIAPFELVICPMGWHKSETVRNTAEELYQSL 504 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G +V DD + G FA +L+G PL++ +G + + + VEI+ R I +++ Sbjct: 505 KAQGVEVMLDDRDVRPGIMFADWELIGVPLRITIGDRGLKEGIVEIQARRQEITNKVAVA 564 Query: 433 EVINYASHRFSN 444 + ++YA + Sbjct: 565 DALDYALELLQS 576 >gi|329849735|ref|ZP_08264581.1| threonyl-tRNA synthetase [Asticcacaulis biprosthecum C19] gi|328841646|gb|EGF91216.1| threonyl-tRNA synthetase [Asticcacaulis biprosthecum C19] Length = 640 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 75/435 (17%), Positives = 140/435 (32%), Gaps = 37/435 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD + L + + +G+ W P G + A +R + +G Sbjct: 230 YIQRIEEAEKRDHRKIGRAMDLF--HMQEEGRGMVFWHPKGWVLWRVLEAYMRRRLDASG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + W +SG ++ Y M + + P + IF+ ++SY Sbjct: 288 YVEVKTPQVLDRSFWEQSGHWEKYRANMFVCETVEGETLSLKPMNCPGHVQIFKVGLRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 + LP + R E G+MR R F DA+ F + + + + ++ I Sbjct: 348 KELPIRMAEFGACHRYEPSGSLHGLMRVRGFTQDDAHIFCREDQIVEETAKFVRLT-KLI 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 LG+++ + + P S F D Sbjct: 407 HADLGMETAYINLATRPEIRAGSDAF-----------------WDKAEGMLAEAAKQAGV 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A YA D + D++ ++ + A + Sbjct: 450 EPVIAEGDGAFYAPKLDFI---VKDAIGREWTCGTLQLDYVLP--------ERLDAEYVA 498 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG M I + I + +P +AP ++ + I Sbjct: 499 EDGSRQRPVMLHRAI--LGSFERFIGIMIENFAGKFPLWLAPVQVVVAPIT---SDANPY 553 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 EK+ L G V D E+I + + P+ +VG K +V ++ + Sbjct: 554 AEKVTQSLRAAGLRVEADLRNEKINYKVREHSVAKVPVIAVVGRKEAETGEVALRFLGSD 613 Query: 425 IREDMSLEEVINYAS 439 + +SL + + Sbjct: 614 GQTILSLADAVQRLQ 628 >gi|326800360|ref|YP_004318179.1| threonyl-tRNA synthetase [Sphingobacterium sp. 21] gi|326551124|gb|ADZ79509.1| threonyl-tRNA synthetase [Sphingobacterium sp. 21] Length = 641 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 75/449 (16%), Positives = 154/449 (34%), Gaps = 41/449 (9%) Query: 2 RRSKY--FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 + S+ +L +++E RD +L L + G+ WLP G + ++ Sbjct: 224 KASELADYLHMIEEAKKRDHRKLGKELELFA-FSERVGMGLPLWLPKGAALRQKLVDFLQ 282 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTD 116 Q + G + P + +L+V SG Y+ YG + + + + + P + + Sbjct: 283 RAQMKAGYEPVVTPHIGHKNLYVTSGHYEKYGADSFQPIRTPQEGEEFLLKPMNCPHHCE 342 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 I+++ +SY++LP F + +R E G+ R R F DA+ F + + Sbjct: 343 IYKTKPRSYKDLPVRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQVKDE-FK 401 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 K+ L +F LG + D + + + Sbjct: 402 KVIDLVLYVFKALGFDDYTAQISLR--------------DPENKGKYIGSEENWLLAEAA 447 Query: 236 NTDFDDIISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY 294 + + L ++ E A Y D + D+L ++ ++ Sbjct: 448 IVEAAEEKGLKTVTELGEAAFYGPKLDFM---VKDALGRKWQLGTIQVDYNLP------- 497 Query: 295 SLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 + G+D + H + G++ AV+ G+ +W Sbjct: 498 -ERFELEYTGSDNQKHRPVMIHRAPFGSLERFVAVLIEHCAGEFPLW------LTPEQFI 550 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 I + + +K+ L+ D E++G + A++ P +IVG K V + Sbjct: 551 ILPVSEKYEEYAKKLLESLNNTDIRGLIDLRDEKVGRKIRDAEVKKIPYMLIVGEKEVEN 610 Query: 414 SKVEIKHRLTGIREDMSLEEVINYASHRF 442 + ++ G M++E Sbjct: 611 GTISVRKHGEGDLGSMTIEAFSKQLIEEI 639 >gi|313899489|ref|ZP_07832999.1| threonine--tRNA ligase [Clostridium sp. HGF2] gi|312955777|gb|EFR37435.1| threonine--tRNA ligase [Clostridium sp. HGF2] Length = 579 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 72/441 (16%), Positives = 148/441 (33%), Gaps = 38/441 (8%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD + +L L M+ + + G+ +LP G + + EE + Sbjct: 174 LHLLEEAKKRDHKKLGRELGLF--MMSEFAPGMPFFLPNGMIIRNLLENFWYEEHTKENY 231 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P + S +LW SG +++Y + M +D+ P + +F++ + SY+ Sbjct: 232 QFIKTPIMMSKELWEVSGHWENYKENMYTTM-VDDREFAIKPMNCPGSLLVFKNGLHSYK 290 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ R E G+ R R F DA+ F + ++ R++ Sbjct: 291 DLPLRMGELGQVHRHEASGALNGLFRVRTFTQDDAHIFMRPDQIESE-VMQLIQFIDRVY 349 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 GL + P E + + + Sbjct: 350 SVFGLSYRI-ELSTRP----------------EKKYIGDLAIWEQSEKALADACVHAGKD 392 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + A Y D H + DSL + +++ F Y + Sbjct: 393 YKVNPGDGAFYGPKLDFH---IKDSLGREWQCGTIQLDMNLPERFDLTYVEKDGSKV--- 446 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 V + G++ ++ G +W + + H + Sbjct: 447 ----RPVMLHRVIFGSIERFIGILIEHFAGHFPVWLA-----PQQVSVVPVHHEKHLGYA 497 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +++ +L +G D E++G + A L P Q+++G + + V ++ + Sbjct: 498 NEVHEKLCALGFRSKLDARNEKLGYRIREAQLSKIPYQLVIGDGEIENRSVTLRRAQSRE 557 Query: 426 REDMSLEEVINYASHRFSNNR 446 MSL++ I + Sbjct: 558 SITMSLDDFIAMMEKAVKEKK 578 >gi|242278211|ref|YP_002990340.1| prolyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638] gi|259511591|sp|C6BYX7|SYP_DESAD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|242121105|gb|ACS78801.1| prolyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638] Length = 580 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 127/238 (53%), Positives = 172/238 (72%), Gaps = 1/238 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y++P L+E+P +AE+ SHKL++R GMI + + GIY++LPLG K+++ V AI+REE Sbjct: 1 MRLSRYYIPTLKEDPSEAEVVSHKLLMRAGMIRKLTSGIYNYLPLGLKSVNKVAAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q DLW E+GR+D YGKE+LR+ DR+ + GPTHEEV+TD+ R Sbjct: 61 MNRAGALEVLMPMVQPGDLWQETGRWDYYGKELLRVKDRHGRDYCLGPTHEEVITDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD G++ SY MF + Sbjct: 121 EVKSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFDKDEAGAEESYRGMFEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSENT 237 Y + F R+GL P++A+SG IGGD SHEF VLADTGE + C + + E Sbjct: 181 YKKAFSRIGLNFRPVQADSGAIGGDFSHEFHVLADTGEDTIAVCKDEKCGYAANLEKA 238 Score = 170 bits (431), Expect = 4e-40, Method: Composition-based stats. Identities = 71/225 (31%), Positives = 119/225 (52%), Gaps = 9/225 (4%) Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 + ++ D++ + + + +EQ+ D+ D PE Sbjct: 349 ADHELLTETDWIAGANKGDTHIKHLSLGRDCKIEQFA-------DLRVITEADPCPECGA 401 Query: 277 VS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 +GIEVGH+F G+KYS M ATF +GK + MG YGIG R+VA+ IE ++D Sbjct: 402 AIEFTKGIEVGHVFKLGSKYSKSMEATFLDENGKTQPMVMGCYGIGVSRIVASAIEQNND 461 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 G I+P ++APF++ +I++ D+ + E+ Y L ++G D +DD E+ G +FA Sbjct: 462 ENGAIFPPTIAPFELCVISLGGKDEAVNEKAEEFYNELMEMGIDAAYDDRKERPGVKFAD 521 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 ADL+G+P+Q+++G K + + VE K+R TG + ++ LE Sbjct: 522 ADLIGYPMQLVIGGKGLKNGIVEAKNRKTGEKIELPLEGFTEAFK 566 >gi|226951685|ref|ZP_03822149.1| prolyl-tRNA synthetase [Acinetobacter sp. ATCC 27244] gi|294651367|ref|ZP_06728686.1| proline--tRNA ligase [Acinetobacter haemolyticus ATCC 19194] gi|226837601|gb|EEH69984.1| prolyl-tRNA synthetase [Acinetobacter sp. ATCC 27244] gi|292822769|gb|EFF81653.1| proline--tRNA ligase [Acinetobacter haemolyticus ATCC 19194] Length = 571 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+YSWLP+G + L V+AI+REE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYSWLPMGTRVLKKVDAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GA+E+ +P Q A LW ESGR++ YG E+LR DR++ + GPTHEEV+TD+ R+ Sbjct: 61 MNRSGALEVFMPVTQPAALWEESGRFEQYGPELLRFKDRHNNDFVLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF E + +Y+ M+ + Sbjct: 121 ELKSYKQLPLNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHANQESLQETYDVMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P++A++G IGG SHEF VLA +GE + D+ E Sbjct: 181 YSRIFSRLGLDFRPVQADTGSIGGSASHEFHVLAASGEDDIAF-STESDYAANVE 234 Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 72/189 (38%), Positives = 100/189 (52%), Gaps = 3/189 (1%) Query: 253 TAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A + D+ N D P+ K RGIEVGHIF GTKYS + G DGK Sbjct: 381 DATFTEVYDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGTKYSEALGCKVLGEDGKPF 440 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIY 369 V MG YGIG RVVAA IE + D KGIIWP ++APF ++++ + A +A E +Y Sbjct: 441 TVTMGCYGIGVTRVVAAAIEQNFDDKGIIWPQAIAPFDVAIVPMNAHKSPRTVEAAEALY 500 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 A L G DV DD E+ G +F+ +L+G P ++++G K + E K R ++ Sbjct: 501 AELQAQGYDVLLDDRNERPGVKFSDLELMGIPHRIVIGEKGLDAGTFEYKGRRDAEASNL 560 Query: 430 SLEEVINYA 438 + EE+ Sbjct: 561 NKEELFAKL 569 >gi|269836488|ref|YP_003318716.1| threonyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745] gi|269785751|gb|ACZ37894.1| threonyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745] Length = 596 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 84/443 (18%), Positives = 155/443 (34%), Gaps = 41/443 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E R D +L L + G+ W P G + EE G Sbjct: 183 YLHRLEEAQRRDHRRLGRELDLFSVN-EDIGAGLILWHPKGAMIRHLIERFETEEHLARG 241 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + S D++ +SG ++Y + M D P + I+ S ++SY Sbjct: 242 YQLVYTPHIASGDIYRKSGHLETYQENMYSPMDIEGAPYYLKPMNCPGHIMIYNSQVRSY 301 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ +R E G++R R F DA+ F P+ + + L Sbjct: 302 RDLPIRLAELGTVYRYERSGTLHGMLRVRGFTQDDAHIFCR-PDQLEDEIKGVLDLALYF 360 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G +E+ T + S + + + ++ Sbjct: 361 ARVFG------------------YEYEAFLATRPEKSIGSDENWERATETLANALRNMGI 402 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I A Y D+ K DSL ++ F ++ AT+ G Sbjct: 403 PYEIDPGAGAFYGPKIDI---KFLDSLGREWTGPTIQVD----FNLPERFD----ATYVG 451 Query: 305 ADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H V + +G+M + + +P +AP + +I I Sbjct: 452 EDGERHRVVMVHRTVLGSMERFVGGLI---EHYAGAFPVWLAPVQAEVIPIADRH---VP 505 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ ARL + V +D +++ ++ A L P ++VG K V ++ R Sbjct: 506 YAHEVAARLKEADLRVEVNDSNDRMQAKIRRAQLQRIPYMLVVGDKEAEAGTVAVRLRTN 565 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 M ++E I + ++ + Sbjct: 566 ENLGAMPVDEFIA-LAKEMNDTK 587 >gi|251797797|ref|YP_003012528.1| prolyl-tRNA synthetase [Paenibacillus sp. JDR-2] gi|247545423|gb|ACT02442.1| prolyl-tRNA synthetase [Paenibacillus sp. JDR-2] Length = 571 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 123/272 (45%), Positives = 166/272 (61%), Gaps = 2/272 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ LP L+E P +AE SH+LMLR G+I Q + GIY++LP G+ L + IIREE Sbjct: 1 MRQSQLLLPTLREAPSEAEAVSHQLMLRAGLIRQLAAGIYTYLPAGRLVLRKLEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P +Q ADLW +SGRY+ YG E++RL DR+D+ GPTHEEV+TD+ R Sbjct: 61 MDNAGCQEVFMPAMQPADLWRQSGRYEKYGPELVRLKDRHDREFALGPTHEEVITDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP T YQIQ KFRDE RPR+G++R REF+MKDAYSFD EG SY +M+ + Sbjct: 121 EVNSYRQLPVTLYQIQTKFRDEKRPRYGLLRGREFMMKDAYSFDADWEGLNESYQRMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGD-LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y RIF R GL P+ A++G IGG+ +HEF+ LAD GE + + E + Sbjct: 181 YHRIFSRCGLHFRPVEADAGTIGGEGGTHEFMALADIGEDTIAACDHCR-YAANLEKAGY 239 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + + P N + D L Sbjct: 240 RIPEGEINTGDSEAYPELEKIHTPNVRKIDEL 271 Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 109/210 (51%), Gaps = 5/210 (2%) Query: 239 FDDIISLNSIVEQWTAPYAA-TSDVHNEKLFDSLP---ENKRVSARGIEVGHIFYFGTKY 294 ++ V AA DV N L D P E K RGIEVG +F GTKY Sbjct: 363 ANETDYHWKHVRPGAHFVAARLRDVRNAVLGDGCPNCAEGKLRMFRGIEVGQVFKLGTKY 422 Query: 295 SLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 S M A + A G + + MG YGIG RV++AV+E HD +GI WP +AP+++ ++ + Sbjct: 423 SEVMQANYLDATGSEKPIIMGCYGIGISRVMSAVVEQHHDEQGIRWPLELAPYQVHVVPV 482 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 A D D K+Y L G +V DD E+ G +F +DL+G P++++VG + +D Sbjct: 483 SAKDGQQMDVAGKLYRELMSAGFEVLLDDRDERPGVKFKDSDLIGIPVRIVVGRQ-AADG 541 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRFSN 444 VE+K+R G + EE + + F + Sbjct: 542 VVELKYRNEGEVLQATTEEALGLVTGYFRS 571 >gi|219669716|ref|YP_002460151.1| prolyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2] gi|254782897|sp|B8FR28|SYP_DESHD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|219539976|gb|ACL21715.1| prolyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2] Length = 575 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 112/240 (46%), Positives = 157/240 (65%), Gaps = 2/240 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ P L+E P +AE+ SH+L++R G+I + + GIY++LPLG + L + I+REE Sbjct: 1 MRVSQILNPTLREVPAEAEVVSHQLLVRAGLIRKSAAGIYTYLPLGLRVLRKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P +Q A+LW ESGR+D YG+E++RL DR+++ GPTHEE++TD+ R Sbjct: 61 MDAKGGQEVLLPIIQPAELWRESGRWDLYGQELMRLNDRHNREFCLGPTHEEIITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP YQIQ K+RDE RPRFG+MR REF+MKD YSFD G SY KM+ + Sbjct: 121 EIRSYKQLPLLLYQIQNKYRDERRPRFGLMRGREFIMKDLYSFDRDEAGLAESYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAE-SGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y RIF R GL P+ A+ G +HEF+VLA++GE V D D+ E + Sbjct: 181 YTRIFTRCGLTFRPVEADAGAIGGTGGTHEFMVLAESGEAAVVYCPDC-DYAANVEKAEC 239 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 68/186 (36%), Positives = 104/186 (55%), Gaps = 2/186 (1%) Query: 261 DVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ + P+ ARGIEVG +F GTKYS ++A F +G +H MG YG Sbjct: 385 DLRMVNAGEPCPQCGSPLKEARGIEVGQVFKLGTKYSKALNAVFLDENGAEHPCVMGCYG 444 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R +AA IE ++D GIIWP +AP+ + ++ + D R+ E +Y L K+G + Sbjct: 445 IGVSRTMAAAIEQNNDKDGIIWPIPIAPYHVIVVPVNMKDDQVRETGEALYQELLKLGVE 504 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 DD E+ G +F ADL+G+PL+V VGSK +++ +VE++ R TG + + +EE+ Sbjct: 505 AVLDDRDERPGVKFKDADLVGYPLRVTVGSKTLANGEVELRDRKTGEVQLVKVEELAGRI 564 Query: 439 SHRFSN 444 Sbjct: 565 QGMIRE 570 >gi|326795786|ref|YP_004313606.1| prolyl-tRNA synthetase [Marinomonas mediterranea MMB-1] gi|326546550|gb|ADZ91770.1| Prolyl-tRNA synthetase [Marinomonas mediterranea MMB-1] Length = 577 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 129/382 (33%), Positives = 193/382 (50%), Gaps = 28/382 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L++ P DA + SH+LM+R GMI Q SKG+Y+WLP G + L V I+R+E Sbjct: 1 MRASNYLFSTLRDAPTDAVVTSHQLMVRAGMIRQISKGLYTWLPTGLRVLKKVENIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW ESGR+ YG E+LR+ DR+++ GPTHEEV+T++ R+ Sbjct: 61 MEKAGALEVMMPGVQPAELWEESGRWQKYGPELLRMKDRHNRDYCLGPTHEEVITELARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M + Sbjct: 121 ELTSYKQLPINFFQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHSNSDSLRQTYDVMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F R+GL P++A++G IGG SHEF VLA +GE + S Sbjct: 181 YCNVFDRIGLDYRPVQADTGSIGGAYSHEFHVLAQSGEDDIAFSDSSEFAANVELAEAVC 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 S ++ ++ + + +K+ D L K + ++ + G S + A Sbjct: 241 SKKSPDTPTQEVSEEFTPDCKT-IQKVADYL---KLPVEKTVKTMLVKGQGPDESETIVA 296 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + + + V+ DS+ S+ Sbjct: 297 LVL--------RGDHNINEVKVEKIDGVLSPFEFATEQDIVDSIGCTPGSIGPQG----- 343 Query: 361 CRDACEKIYARLSKVGCDVFWD 382 L + G V D Sbjct: 344 -----------LKEKGIRVIVD 354 Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats. Identities = 73/191 (38%), Positives = 110/191 (57%), Gaps = 3/191 (1%) Query: 258 ATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T D+ N D P+ + V RGIEVGHIF G +YS + A+ +GK + MG Sbjct: 387 ETKDIRNVVEGDPSPDGEGHIVIKRGIEVGHIFQLGQQYSEALRASVLDENGKAQTMWMG 446 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSK 374 YGIG R+VAA IE + D KGI+WP+S+ PF +++I + + RD C+ +Y L + Sbjct: 447 CYGIGVSRIVAAAIEQNFDDKGILWPESITPFSVAIIAMNYDKSEAVRDECDHLYNELKQ 506 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +G DV DD E+ G +FA +LLG P +++VG K + ++ +E K+R TG ED+ +E Sbjct: 507 LGIDVLLDDRKERPGVKFADCELLGIPHRLVVGDKGLKNNSLEYKYRKTGEGEDVPKDEA 566 Query: 435 INYASHRFSNN 445 + + N Sbjct: 567 VKFIRKVLQAN 577 >gi|251772034|gb|EES52606.1| threonyl-tRNA synthetase [Leptospirillum ferrodiazotrophum] Length = 587 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 80/445 (17%), Positives = 140/445 (31%), Gaps = 47/445 (10%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIH---QHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +L L+E RD + G ++ G+ WLP G + + I + + Sbjct: 178 YLARLEEIRQRDHRKIGKE----QGFFRTLDENGAGMVLWLPRGARIRRVIEEIWKTRHD 233 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 R G + P + DLW +SG +D Y + M + P + IF+ + Sbjct: 234 RHGYQYVYTPHIARLDLWKQSGHWDFYRESMFSPMEIEGSEFELKPMNCPFHILIFKEAV 293 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP ++ +R E G++R R F DA+ F + + K+ Sbjct: 294 KSYRDLPVRLAELGTVYRYERSGTLHGLLRVRGFTQDDAHIFCRPEDIASE-IGKVLTLV 352 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + G + + + P G S E + + Sbjct: 353 DEMLLPFGFTNRSVYLSTRPEGSVGSDENWA-----------------LATGALEEALKN 395 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I Y D+ K D L ++S ++ F K+ T Sbjct: 396 AGIPYEIDPGEGVFYGPKIDM---KFHDVLGRTWQLSTIQVD----FNLPEKFD----IT 444 Query: 302 FKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 ++ + G D M + R ++E + Sbjct: 445 YRDSSGNDVRPIMIHRALLGSVERFFGILVEHFKGAFPLWLAPEQVTILPIA-------D 497 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 KI L + G V D E+IG++ A L+ P ++G + D + I+ Sbjct: 498 RHIPYARKIAETLEQEGVRVVTDFRNEKIGAKIRDAQLMKIPQMWVLGDREAQDETISIR 557 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 HR + E + Sbjct: 558 HRDGQAGGTLPWREALVAIKEEIRT 582 >gi|297583666|ref|YP_003699446.1| threonyl-tRNA synthetase [Bacillus selenitireducens MLS10] gi|297142123|gb|ADH98880.1| threonyl-tRNA synthetase [Bacillus selenitireducens MLS10] Length = 649 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 79/441 (17%), Positives = 166/441 (37%), Gaps = 33/441 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L + + +G+ WLP G V I + + R G Sbjct: 234 YLQLLEERKERDHRKLGKELGIFAV-SQKVGQGLPLWLPKGATVRRQVERYIVDIEERLG 292 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P L S DL+ SG +D Y +M + +++ ++ P + I+++ SY Sbjct: 293 YDHVYTPVLGSVDLYKTSGHWDHYQDDMFPVLQMDNEDLVLRPMNCPHHMMIYKNEKHSY 352 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 RNLP ++ R E+ G+ R R + DA+ F + + ++ + Sbjct: 353 RNLPLRIAELGTMHRHEMSGALAGLQRVRAMTLNDAHIFCRPDQLKDE-FIRVVELIQAV 411 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + +K R + + + + + D++ Sbjct: 412 YKDFQIKDYYFRLS-------------YRDPEDKEKYVDNDEMWEKAQAMLKEAVDEMGV 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y DV ++ +L +++ +S ++ F+ ++ T+ G Sbjct: 459 EYIEADGEAAFYGPKLDV---QVKTALGKDETLSTVQLD----FHLPNRFD----LTYTG 507 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DGKDH + G + + + + +P +AP + LI + V D Sbjct: 508 EDGKDHRPVVIHR--GVVSTMERFVAFLLEEYKGAFPTWLAPVQAELIPVN---DVHLDY 562 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ L + G V D E++G + A + P +++G + ++ V ++ Sbjct: 563 VRQVEDELKRAGVRVHVDVRNEKLGYKIREAQMQKVPYLLVLGDQERDNASVNVRRYGQK 622 Query: 425 IREDMSLEEVINYASHRFSNN 445 E++SL+ + + Sbjct: 623 DSEEVSLDVFVKSITEDIRTY 643 >gi|262371768|ref|ZP_06065047.1| prolyl-tRNA synthetase [Acinetobacter junii SH205] gi|262311793|gb|EEY92878.1| prolyl-tRNA synthetase [Acinetobacter junii SH205] Length = 571 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 125/253 (49%), Positives = 171/253 (67%), Gaps = 1/253 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+YSWLP+G + L V+AI+REE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYSWLPMGTRVLKKVDAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GA+E+ +P Q A LW ESGR++ YG E+LR DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNRSGALEVFMPVTQPAALWEESGRFEQYGPELLRFKDRHTNDFVLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF E + +Y+ M+ + Sbjct: 121 ELKSYKQLPLNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHANQESLQETYDVMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P++A++G IGG SHEF VLA +GE + D+ E + Sbjct: 181 YSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLASSGEDDIAF-STESDYAANVEMAEAV 239 Query: 241 DIISLNSIVEQWT 253 + + +++ Sbjct: 240 LVGERLAATQEFK 252 Score = 173 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 75/192 (39%), Positives = 105/192 (54%), Gaps = 3/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A Y+ D+ N D P+ K RGIEVGHIF GTKYS + G DGK Sbjct: 379 ERDAKYSEVYDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGTKYSEALGCKVLGEDGK 438 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEK 367 V MG YGIG RVVAA IE + D KGIIWP ++APF+++++ + A +A E Sbjct: 439 PFTVTMGCYGIGVTRVVAAAIEQNFDDKGIIWPQAIAPFEVAIVPMNAHKSPRTLEAAEA 498 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +YA L G DV DD E+ G +F+ +L+G P ++++G K + E K R Sbjct: 499 LYAELQAQGYDVLLDDRNERPGVKFSDLELMGIPHRIVIGEKGLDAGTFEYKGRRDEEST 558 Query: 428 DMSLEEVINYAS 439 ++S EE+I + Sbjct: 559 NLSKEELIKKLA 570 >gi|148555657|ref|YP_001263239.1| threonyl-tRNA synthetase [Sphingomonas wittichii RW1] gi|148500847|gb|ABQ69101.1| threonyl-tRNA synthetase [Sphingomonas wittichii RW1] Length = 690 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 82/439 (18%), Positives = 147/439 (33%), Gaps = 47/439 (10%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD ++ L + ++G W P G + + A +R + + G Sbjct: 264 LTRLEEAAKRDHRRIGQEMDLF--HLQSEAQGSVFWHPKGFRLWRALEAYMRRKLDAAGY 321 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-------------MIYGPTHEEV 113 +E+ P L A W +SG + Y + M + D A M P + Sbjct: 322 VEVKTPQLMDARQWEQSGHWGKYRENMFVVPDEIPNAEEEGPVLSGESELMALKPMNCPA 381 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IFR IKSYR+LP + R+E G+MR R+F DA+ F + Sbjct: 382 HVLIFRQGIKSYRDLPIRMAEFGCCHRNEPHGALHGIMRVRQFTQDDAHIFVREDQLIAE 441 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 ++ LG + ++ P S E A+ + Sbjct: 442 -IKDFCDLLDAVYRDLGFEQYAIKLALRPEKRFGSEEMWDKAEQTLRDAVAASGRATEAF 500 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 E +E A YA + H L D++ +V + Sbjct: 501 GWEE------------LEGEGAFYAPKLEFH---LTDAIGRTWQVGTIQADTVLP----- 540 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + A++ G DG+ H + +G ++ H G+ +W V ++ Sbjct: 541 ---ERLDASYVGEDGERHRPVMLHRAILGTFERFIGILIEHHAGRFPLWLAPVQAVVATI 597 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + D ++ A+L+ G V D E+I + L P ++VG + Sbjct: 598 V------SDADDYAREVEAKLAAAGLRVESDLRNEKINYKVREHSLAKVPALLVVGKREA 651 Query: 412 SDSKVEIKHRLTGIREDMS 430 + V I+ + + Sbjct: 652 EEGTVAIRRLGEQAQTVLP 670 >gi|323527403|ref|YP_004229556.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1001] gi|323384405|gb|ADX56496.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1001] Length = 578 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 136/288 (47%), Positives = 180/288 (62%), Gaps = 5/288 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPIGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEKYGPELLRFKDRKQSDFVIGPTHEEVVTDIARG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD G + SY KM+ + Sbjct: 121 QIKSYRQLPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDAAGLRESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD-- 238 Y+RIF RLGL + A++G IGG SHEF V+A+TGE + DF E + Sbjct: 181 YVRIFTRLGLDFRAVAADNGSIGGSGSHEFHVIAETGEDAIAYCPT-SDFAANVEAAEAL 239 Query: 239 --FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 + + +++ P A + E L L + E Sbjct: 240 PLCAERAAPAEELKKTPTPGKAKCEAVAEYLNIPLERTIKSIVLATEN 287 Score = 174 bits (441), Expect = 3e-41, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 107/192 (55%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K V RGIEVGH+F GTKYS M+AT +GK + Sbjct: 382 PEPVVADIRNVKKGDPSPDGKGVLDICRGIEVGHVFQLGTKYSEAMNATCLDENGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 +MG YG+G R++ A IE + D KGIIWP+S+APF++ L + + R+ +K+YA Sbjct: 442 EMGCYGVGITRILGAAIEQNFDEKGIIWPESIAPFEVVLCPMGYDRSEAVREQADKLYAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD GE+ G FA +L+G P ++++G + + + K+E + R + + Sbjct: 502 LVDAGIDVILDDRGERPGVMFADWELIGVPHRLVIGDRGLKEGKLEYQGRRDAEATLLPV 561 Query: 432 EEVINYASHRFS 443 +E + Sbjct: 562 DEAAQAVIAKVR 573 >gi|148244484|ref|YP_001219178.1| prolyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA] gi|166980170|sp|A5CX68|SYP_VESOH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|146326311|dbj|BAF61454.1| prolyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA] Length = 560 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 117/241 (48%), Positives = 164/241 (68%), Gaps = 1/241 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ +K +P +E P DA+I SH+LM+R G+I + + G+YS+LP+G + L V IIR+E Sbjct: 1 MKTTKLLIPTQKEAPNDAKIISHQLMIRAGLISKLALGLYSYLPIGIRVLQKVENIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GA E+ +P +Q A+LW ESGR++ YG E+LR DR+ + GPTHEEV+T + R Sbjct: 61 MNKSGAQEVLMPIVQPAELWKESGRWNKYGAELLRFIDRHQREFCLGPTHEEVITHLARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY+ LP FYQIQ KFRDE+RPRFGV+R REF+MKDAYSF + + +Y M+ + Sbjct: 121 YLRSYKQLPMNFYQIQTKFRDEIRPRFGVIRMREFIMKDAYSFHIDEASLQETYEVMYKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF+RLGL + A+SG IGG+ SHEF VLAD+GE + C D D+ E F Sbjct: 181 YCNIFNRLGLNYRIVLADSGSIGGNTSHEFHVLADSGEDTI-CFSDKSDYAANIEKVTFF 239 Query: 241 D 241 Sbjct: 240 K 240 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 70/231 (30%), Positives = 110/231 (47%), Gaps = 9/231 (3%) Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 D + + DF + D+ I ++ A D+ N D P+ Sbjct: 335 DIDLIVDYSASVLCDFVCGANECDYHLIGVNWQGIKFIDA------DLRNAVDGDYSPDG 388 Query: 275 K--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 K + RGIEVGHIF GTKYS M A G GK MG YGIG R++AA IE + Sbjct: 389 KGKLMIKRGIEVGHIFQLGTKYSSVMKANVIGESGKAVTTTMGCYGIGVTRIIAAFIEQN 448 Query: 333 HDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 HD KGII+ ++APF+I ++ I + +++Y + K DV DD E +G Sbjct: 449 HDDKGIIFSQAIAPFQIVIVPINYNKSTRVKALADRLYQQFIKASIDVLLDDRKEHVGIM 508 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 FA ++LLG P ++++ + VE K R + ++ ++ +++ + Sbjct: 509 FADSELLGIPHRIVISDTHADNGSVEYKARNKTNKIEVKFDDALSFIQTKM 559 >gi|300724773|ref|YP_003714098.1| proline tRNA synthetase [Xenorhabdus nematophila ATCC 19061] gi|297631315|emb|CBJ92010.1| proline tRNA synthetase [Xenorhabdus nematophila ATCC 19061] Length = 573 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 122/235 (51%), Positives = 166/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SHKLMLR GMI + + G+Y+W+P G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVVSHKLMLRAGMIRKLASGLYNWMPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW+ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWLESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ KFRDE+RPRFGVMRSREF+MKDAYSF + E + +Y+KM+ + Sbjct: 121 EVTSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQESLQETYDKMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL P+ A++G IGG SHEF VLA++GE + ++ E Sbjct: 181 YSKIFTRIGLDFRPVLADTGSIGGSASHEFQVLAESGEDDIVF-STESNYAANIE 234 Score = 183 bits (463), Expect = 6e-44, Method: Composition-based stats. Identities = 78/206 (37%), Positives = 117/206 (56%), Gaps = 3/206 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D I + P +D+ N D+ P+ K + RGIEVGHIF GTKYS + Sbjct: 366 DDKHYFGINWERDLPLPEIADIRNVVEGDASPDGKGTLLIKRGIEVGHIFQLGTKYSDAL 425 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 AT + DG + V MG YGIG R+VAA IE SHD +GIIW D++APF+++++ + H Sbjct: 426 KATVQNEDGHNQVVTMGCYGIGVTRIVAAAIEQSHDDRGIIWSDAIAPFQVAILPMNMHK 485 Query: 359 QV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 ++ EK+YA L G DV +DD E+ G FA +L+G P +++G + + + ++E Sbjct: 486 SYRVKEVAEKLYADLRASGIDVIFDDRKERPGVMFADMELIGVPHTLVIGDRNLDNGEIE 545 Query: 418 IKHRLTGIREDMSLEEVINYASHRFS 443 K R TG ++ + LE +I Y + Sbjct: 546 YKCRRTGDKQMLKLESIIEYLKGQIQ 571 >gi|157691545|ref|YP_001486007.1| threonyl-tRNA synthetase [Bacillus pumilus SAFR-032] gi|157680303|gb|ABV61447.1| threonine--tRNA ligase [Bacillus pumilus SAFR-032] Length = 643 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 77/444 (17%), Positives = 166/444 (37%), Gaps = 39/444 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + + RD +L L M + + G+ +LP Q + + A RE ++ Sbjct: 233 LAEYLHFMEEASKRDHRKLGKQLSLF--MFSEEAPGMPFYLPKSQIVRNELMAFSREVRS 290 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+S P + + +LW +SG +D Y + M ++ + + P + +F++ + Sbjct: 291 KAQYEEVSTPFMMNQELWEKSGHWDHYHENM-YFSEVDHTSFALKPMNCPGHMLMFKNSL 349 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+LP + R E G+ R R F DA+ F L + + ++F Sbjct: 350 FSYRDLPIRMAEFGQVHRHEFSGALNGLFRVRTFCQDDAHIF-LREDQIEAEIKRIFQLV 408 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G E+ V T + D + D Sbjct: 409 DHVYRTFG------------------FEYSVELSTRPEKALGDDAIWDISESALKNVLDR 450 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + E A Y D H + D+L + + + ++ F K+ T Sbjct: 451 LKVDYQLNEGDGAFYGPKIDFH---IKDALQRSHQCATIQLD----FQMPEKFD----LT 499 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + + + I + + +P +AP ++ +I + + Sbjct: 500 YINEKNEKVRPVVIHSAIFGSLDR--FLGILIEHFAGAFPLWLAPVQVQIIPVSK---IH 554 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D C ++ +L K+G V D+ E++G + A + P ++G + + + I+ Sbjct: 555 LDHCLEVQQQLRKIGIRVTIDERDEKLGYKMREAQMQKIPYIAVIGDTEMQEKTLNIRQH 614 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 +S+++ + A+ + + Sbjct: 615 GEKTSNQLSIDDFQHMAAQQIKDR 638 >gi|91787975|ref|YP_548927.1| threonyl-tRNA synthetase [Polaromonas sp. JS666] gi|123059945|sp|Q12BR3|SYT_POLSJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|91697200|gb|ABE44029.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Polaromonas sp. JS666] Length = 635 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 82/443 (18%), Positives = 147/443 (33%), Gaps = 40/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L I H+ G+ W P G V +R+ Sbjct: 230 QYLTMLEEAEKRDHRKLGKELDLF--HIDDHAPGLVFWHPKGWTIWQGVEQYMRKVYQDN 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + LW ++G +D Y M + + P + IF+ IKS Sbjct: 288 GYQEVKGPQVIDKTLWEKTGHWDKYRDNMFT-TESEKREYALKPMNCPGHILIFKQGIKS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + + R+E G+MR R F D + F + K + + Sbjct: 347 YRDLPLRYGEFGQCHRNEPSGGLHGIMRVRGFTQDDGHIFCTEEQILKECVDYTT-LLQK 405 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G K+I + + P S E D + Sbjct: 406 VYTDFGFKNIIYKVATRPDARIGSDE-----------------SWDKAEQALIESLRASG 448 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I A Y + L D++ + ++ + A + Sbjct: 449 CEFEISPGEGAFYGPKIEY---TLKDAIGRQWQCGTMQVDFSMP--------ERLDAEYV 497 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG H + +G++ ++ + P +AP ++S++NI Sbjct: 498 GEDGARHRPVMLHRAIVGSLERFIGILI---EEHAGALPTWLAPIQVSVLNITDS---QA 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + ++ L G V D E+I + L P ++VG K + V ++ R Sbjct: 552 EYAREVAKTLQNQGLRVNLDLRNEKITYKIREHSLQKLPYILVVGDKEKAAGAVAVRARG 611 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 MS+E + + Sbjct: 612 NKDLGVMSIEAFAQQIASDIAQK 634 >gi|301760003|ref|XP_002915815.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like [Ailuropoda melanoleuca] gi|281353585|gb|EFB29169.1| hypothetical protein PANDA_003827 [Ailuropoda melanoleuca] Length = 475 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 152/456 (33%), Positives = 228/456 (50%), Gaps = 44/456 (9%) Query: 3 RSKYFLPI-LQEN---PRDAEI-----ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNV 53 S+ F P L+E+ P + S +LML+ G+IH S G Y LP +A++ + Sbjct: 42 LSRVFQPQNLREDQVLPLEDRSGNLTCKSQRLMLQVGLIHPASPGCYHLLPYTVRAMEKL 101 Query: 54 NAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEV 113 +I +E G ++++P+L A+LW + R+D GKE+LRL DR+ K GPTHEE Sbjct: 102 ERVIDQEMQAIGGQKVNMPSLSPAELWRATNRWDLMGKELLRLRDRHGKEYCLGPTHEEA 161 Query: 114 MT-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKH 172 +T + SY+ LPF YQ+ KFRDE RPRFG++R REF MKD Y+FD +PE ++H Sbjct: 162 VTALVASQKTMSYKQLPFLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSPEAARH 221 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 +Y + +Y +F RLGL+ + ++A+ G IGG SHEF + AD GE + Sbjct: 222 TYGLVCEAYGSLFRRLGLRCVRVQADVGSIGGTASHEFQLPADIGEDRFAVCPSC----- 276 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 A T + + + ARGIEVGH FY GT Sbjct: 277 ---------------------GFSANTETLRSSQTDCPTCRGPLTKARGIEVGHTFYLGT 315 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 KYS +A F A GK +MG YG+G R++AA IE I WP +AP+++ LI Sbjct: 316 KYSSIFNAQFTDAQGKPCLAEMGCYGLGVTRILAAAIEVLSTEDCIRWPGLLAPYQVCLI 375 Query: 353 NIKA--HDQVCRDACEKIYARLSKV----GCDVFWDDMGE-QIGSQFAVADLLGFPLQVI 405 K ++ + +Y +++ +V DD IG++ A+ G+P +I Sbjct: 376 PPKKGSKEEAAAELMGHLYDLITEAVPQLHGEVLLDDRTHLTIGNRLKDANKFGYPFVII 435 Query: 406 VGSKFVSDSK-VEIKHRLTGIREDMSLEEVINYASH 440 G + + D E+ + T ++ E V + S Sbjct: 436 AGKRALEDPAHFEVWSQNTSEVVFLTREGVTEFLSQ 471 >gi|158523204|ref|YP_001531074.1| threonyl-tRNA synthetase [Desulfococcus oleovorans Hxd3] gi|238686905|sp|A9A078|SYT_DESOH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|158512030|gb|ABW68997.1| threonyl-tRNA synthetase [Desulfococcus oleovorans Hxd3] Length = 637 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 151/442 (34%), Gaps = 41/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + H+ + G+ + P G K + + R E G Sbjct: 227 YLTLIEEAKKRDHRKLGAELDLFS--FHEEAAGMPFFHPNGMKLWNALLDYWRLEHRAAG 284 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG +++Y + M ++ +D P + +++ SY Sbjct: 285 YVEVKTPVMLDRALWEKSGHWENYRENM-YVSVIDDNQYAIKPMNCPGGMLLYKEKRYSY 343 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP +I L R EL G+ R R F DA+ F +TP+ + + I Sbjct: 344 RDLPLRVAEIGLVHRHELSGVLSGLFRVRAFHQDDAHIF-MTPDQIEQEIFGVLKLVETI 402 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + GL + + P + E V A G D Sbjct: 403 YSTFGLGF-HLELSTRPAKSIGTDEQWVKATAG-----------------LRAALDAYGK 444 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ E A Y DVH + D+L + +++ ++ Sbjct: 445 GYAVNEGDGAFYGPKIDVH---IKDALGRTWQCGTIQLDMSLP--------ERFDLSYID 493 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 A + + G++ ++ + +P +AP + L+ + Sbjct: 494 AGSEKQRPVMIHRVIYGSIERFLGILI---EHFAGKFPLWLAPTQAVLLPLN---DDMIP 547 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ + G DD E + + A + PL + +G K + ++ Sbjct: 548 YAREVRQEFEQAGIRTEIDDRSESLNKKVRQAQIDKIPLIITLGGKEKEARTLSVRTLDG 607 Query: 424 GIREDMSLEEVINYASHRFSNN 445 +R +S E A + Sbjct: 608 QVRHGVSHEAFFAVAKEHIAKR 629 >gi|157826951|ref|YP_001496015.1| threonyl-tRNA synthetase [Rickettsia bellii OSU 85-389] gi|166225492|sp|A8GVV1|SYT_RICB8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157802255|gb|ABV78978.1| threonyl-tRNA synthetase [Rickettsia bellii OSU 85-389] Length = 633 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 77/440 (17%), Positives = 158/440 (35%), Gaps = 41/440 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD +L L + ++G+ W G + + IR + + Sbjct: 229 ESYLFMLEEAEKRDHRKLGKELDLF--HFQEEAQGMVFWHDKGWSVYNTIEQYIRRKIRK 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G IE+ P L LW SG ++ + +M + +DK + P + IF+ IK Sbjct: 287 NGYIEVKTPVLVDKSLWELSGHWEKFRDDMF-ALETDDKTLALKPMNCPCHVQIFKQGIK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + L R+E G+MR R + DA+ F + + + + Sbjct: 346 SYRDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETVSF-CKLLT 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G I ++ P S E D + + Sbjct: 405 EVYKDFGFTDIKVKFSDRPEVRAGSSE-----------------TWDKAENALKEAVEKA 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 ++ A Y + L D++ + ++ F + + A++ Sbjct: 448 GYSYTLNPGEGAFYGPKLEF---VLTDAIGRQWQCGTLQMD----FVLPER----LDASY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 A G+ + +G++ ++ + G+ +W + I Sbjct: 497 VAASGEKKRPVMLHRAILGSLERFIGILIEEYAGRFPLW------LAPVQVAIATITSDL 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ L + G V + ++I + P+ ++G + + +V I+ Sbjct: 551 NDYALEVQKALIESGVRVDINISPDKINYKIREFSNQKVPMIAVIGKQEKENKQVTIRRL 610 Query: 422 LTGIREDMSLEEVINYASHR 441 T +E +S+E++I Y Sbjct: 611 GTTEQEVLSIEQLIEYIREE 630 >gi|212691282|ref|ZP_03299410.1| hypothetical protein BACDOR_00773 [Bacteroides dorei DSM 17855] gi|237712289|ref|ZP_04542770.1| threonyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA] gi|237726428|ref|ZP_04556909.1| threonyl-tRNA synthetase [Bacteroides sp. D4] gi|212666514|gb|EEB27086.1| hypothetical protein BACDOR_00773 [Bacteroides dorei DSM 17855] gi|229434954|gb|EEO45031.1| threonyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4] gi|229453610|gb|EEO59331.1| threonyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA] Length = 646 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 156/445 (35%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L KG+ WLP G + +R Q R Sbjct: 230 EYLVMLEEAKKRDHRKIGKEMDLFM-FTDMVGKGLPMWLPKGTALRIRLQDFLRRIQARY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + +L++ SG Y YGK+ + + P + I+++ Sbjct: 289 DYQEVMCPPIGNKNLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F P+ K + ++ Sbjct: 349 RSYKDLPLRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHLFCR-PDQVKEEFLRVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + +++ + D + + D + + Sbjct: 408 NIVFKSMNFENVEAQISLR--------------DKVNREKYIGSDENWEKAEQAIIEACE 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + VE A Y D + D++ ++ ++ Sbjct: 454 EKGLTAKVEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFQL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G+D + H + G+M AV+ GK +W + I + Sbjct: 503 EYMGSDNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LTPDQVAILPISE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L K DD E+IG + ++ P +IVG K + +V ++ Sbjct: 557 KFNEYAEKVKAELRKFDVRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVAVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M +EE + SN Sbjct: 617 KQGEGDKGTMKIEEFGKNIAEEVSN 641 >gi|301629493|ref|XP_002943874.1| PREDICTED: prolyl-tRNA synthetase-like [Xenopus (Silurana) tropicalis] Length = 657 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 123/259 (47%), Positives = 167/259 (64%), Gaps = 4/259 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ SHKLMLR G+I + GIYS++P+G + + V AI+REE Sbjct: 1 MKASQFFISTLKEAPADAEVVSHKLMLRAGLIKKLGAGIYSYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E ++P +Q A+LW E+GR++ G E+LR+ DR+D+ + PT EEV+TDI R Sbjct: 61 MDRAGAAECAMPVVQPAELWQETGRFEKMGPELLRIKDRHDRDFVVQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP FYQIQ KFRDE RPRFG+MR REF+MKDAYSFD P +K SY M + Sbjct: 121 ELRSYKQLPRNFYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDPASAKASYQVMAAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GL+ + A+SG IGGDLS EF V+A TGE + + E Sbjct: 181 YCRIFDRFGLRYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYCPQSH-YAANMEKA--- 236 Query: 241 DIISLNSIVEQWTAPYAAT 259 + ++ AP A T Sbjct: 237 EALAPAGPRPGAAAPMAKT 255 Score = 43.2 bits (100), Expect = 0.079, Method: Composition-based stats. Identities = 25/54 (46%), Positives = 30/54 (55%), Gaps = 2/54 (3%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 +D+ N D P+ + R IEVGH+FY GTKYS M ATF G DGK Sbjct: 392 VVADLRNVVAGDKSPDGAGELCIERAIEVGHVFYLGTKYSKAMGATFLGEDGKP 445 >gi|258543038|ref|YP_003188471.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01] gi|256634116|dbj|BAI00092.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01] gi|256637176|dbj|BAI03145.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03] gi|256640228|dbj|BAI06190.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07] gi|256643285|dbj|BAI09240.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22] gi|256646340|dbj|BAI12288.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26] gi|256649393|dbj|BAI15334.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32] gi|256652379|dbj|BAI18313.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655437|dbj|BAI21364.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12] Length = 645 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 79/438 (18%), Positives = 152/438 (34%), Gaps = 41/438 (9%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E RD ++ L + + G W G + + +R Q R G Sbjct: 235 LHQLEEAEKRDHRRIGKEMGLF--HFQEEAVGQVFWHAKGWRLYTALQDYMRRAQTRHGY 292 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L LW SG +D Y M + +K + P + IFR ++SY Sbjct: 293 QEVRTPQLVDRALWEASGHWDKYRHHMFIATVEDENKTLALKPMNCPCHVQIFRHGLRSY 352 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R E G+MR R F DA+ F + + + + + Sbjct: 353 RELPLRMAEFGACHRYEPSGALHGLMRVRGFTQDDAHIFCTEDQIADETV-RFVKMLHDV 411 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + LG + + ++ P S E D + Sbjct: 412 YQDLGFEHVRVKFADRPEQRAGSDE-----------------VWDKAENALKEACTVAGV 454 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D++ + + +++ + A++ G Sbjct: 455 EYEHNPGEGAFYGPKLEF---VLRDAIGRDWQCGTLQVDLVLP--------ERLDASYIG 503 Query: 305 AD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D G+ V + +G+ ++ H G+ +W V S++ Sbjct: 504 EDSGRHRPVMLHRAILGSFERFLGILIEQHAGRFPLWLAPVQVVVASIV------SDAAP 557 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E++ A L + G V D ++I ++ + P+ ++VG + + V ++ T Sbjct: 558 YAEEVAAALREAGLAVEADVRNDKINAKVREHSVARVPVILVVGRREAEERTVAMRRLGT 617 Query: 424 GIREDMSLEEVINYASHR 441 ++E +SL++ + + Sbjct: 618 QVQETLSLDDAVARLKNE 635 >gi|114331243|ref|YP_747465.1| prolyl-tRNA synthetase [Nitrosomonas eutropha C91] gi|123026746|sp|Q0AGN2|SYP_NITEC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114308257|gb|ABI59500.1| prolyl-tRNA synthetase [Nitrosomonas eutropha C91] Length = 568 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 129/292 (44%), Positives = 175/292 (59%), Gaps = 3/292 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++FL L+E P +AE+ASH+LMLR G+I + G+Y+W+PLG + L + IIREE Sbjct: 1 MRVSQFFLSTLKEAPAEAELASHRLMLRAGLIKRLGSGLYTWMPLGLRILHKIEHIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N +GA+E+ +P + A+LW ESGR+D +G +ML++ DR+ +GPTHEEV+ DI R Sbjct: 61 MNSSGALELLMPAVHPAELWQESGRWDVFGPQMLKIQDRHQHDFCFGPTHEEVIVDIARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M + Sbjct: 121 EIKSYRQLPINFYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHADLGSLEQTYQLMHET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GLK + A++G IGG SHEF VLAD+GE + D D+ E + Sbjct: 181 YSRIFTRIGLKFRAVAADTGAIGGSGSHEFHVLADSGEDAIAFCPD-SDYAANIELAEAI 239 Query: 241 DIISLNSIVEQWTAPYAATSD--VHNEKLFDSLPENKRVSARGIEVGHIFYF 290 L A + F S+P + + + FY Sbjct: 240 SHGILRKDPAGVMKKIATPDRKSCSDVAEFLSVPIEQTLKTLAVIADGRFYL 291 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 72/183 (39%), Positives = 102/183 (55%), Gaps = 3/183 (1%) Query: 261 DVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P+ K RGIEVGHIF TKYS M AT+ G+ ++MG YG Sbjct: 382 DIRNVVTGDPSPDGKGMLEICRGIEVGHIFQLRTKYSEKMKATYLDESGQTQILEMGCYG 441 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA-CEKIYARLSKVGC 377 IG R+VAA IE + D +GII+P ++APF++S+I I H + A EK+Y G Sbjct: 442 IGVSRIVAAAIEQNCDERGIIFPVAIAPFQLSIIPIGYHKNLQIQAEVEKLYRACRAAGI 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V DD E+ G FA +L+G P ++++G + + D VE + RL +SL+EVI Sbjct: 502 EVLLDDREERPGVMFADQELIGIPHRIVIGERNLRDGMVEYQGRLDKTSRLLSLQEVIPV 561 Query: 438 ASH 440 Sbjct: 562 IRE 564 >gi|94986834|ref|YP_594767.1| prolyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00] gi|114152206|sp|Q1MRD0|SYP_LAWIP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|94731083|emb|CAJ54446.1| Prolyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00] Length = 575 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 142/389 (36%), Positives = 196/389 (50%), Gaps = 8/389 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ ++P L+E P DAE+ SHKL++R GMI + + GIY+WLPLG K L+ +IIR E Sbjct: 1 MRWSQCYIPTLKEAPGDAELLSHKLLIRAGMIRKLTSGIYTWLPLGLKTLNKAISIIRSE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P +Q ADLW ESGR+D YGKE+LR+ DR+D+ GPTHEEV+T + R Sbjct: 61 MNRIGAEEILMPMVQPADLWKESGRWDQYGKELLRIKDRHDREYCLGPTHEEVVTHLLRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR+REFLMKDAYSFD EG+ SY+ MF + Sbjct: 121 EVRSYRQLPINVYQIQTKFRDEIRPRFGLMRAREFLMKDAYSFDQDNEGADISYHTMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSENTDF 239 Y IF + L + A+SG IGG+ SHEF+V+AD+GE + FC K I T Sbjct: 181 YKAIFTCMALDFRAVEADSGSIGGNFSHEFMVIADSGEDTIAFCRKCDWAANIEHAATLP 240 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR--GIEVGHIFYFGTKYSLP 297 +L + F ++PE + + I+ + Sbjct: 241 PQTKALTLEKSMEEVVTPGQHTIKAVSTFLTIPEQQIIKTILYTIDNKPVAVLVRGDREV 300 Query: 298 MSATFKGADGKDHYVQMG----SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 K GA A + + V + N Sbjct: 301 NEVKVKNMLDATVITMATPEQVHQWTGAPVGFAGPVGFTAGPIIADHELMVYNDWVVGAN 360 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWD 382 + D + ++ + D Sbjct: 361 KPDKHILHVDLARDVQN-ITFADIRLITD 388 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 75/177 (42%), Positives = 106/177 (59%), Gaps = 2/177 (1%) Query: 260 SDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ D P R +GIEVGH+F GTKYS M+A F +G++ + MG Y Sbjct: 381 ADIRLITDADGCPSCGREIALTKGIEVGHVFKLGTKYSKSMNAFFLDENGEEQLMVMGCY 440 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG RV+AA IE ++D GII+P +APF+I LIN+ D+ +IY G Sbjct: 441 GIGVSRVIAACIEQNNDKYGIIFPPPLAPFEIMLINLDPRDESVVMKASEIYQFFLSEGI 500 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +VF DD E+ G +F ADLLGFP+QVI+G+K +++ +E+K+R TG + SLE Sbjct: 501 EVFLDDREERPGIKFNDADLLGFPIQVIIGAKSLANGIIEVKNRKTGEKSSFSLERF 557 >gi|172057852|ref|YP_001814312.1| prolyl-tRNA synthetase [Exiguobacterium sibiricum 255-15] gi|226701289|sp|B1YI68|SYP_EXIS2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|171990373|gb|ACB61295.1| prolyl-tRNA synthetase [Exiguobacterium sibiricum 255-15] Length = 566 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 121/319 (37%), Positives = 175/319 (54%), Gaps = 5/319 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L+E P DAE SH+L+LR G + Q++ GIYS+LPL ++ L + IIR+E Sbjct: 1 MKQSKLFMPTLREVPSDAEAISHQLLLRAGFMRQNAAGIYSYLPLAKRVLSKIETIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P +Q A+LW E+GR+D YG E++RL DR+D+ G THEE++T I R Sbjct: 61 MEGAGAQELLMPAIQPAELWEETGRWDIYGPELMRLTDRHDRRFALGATHEELITSIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ+K+RDE RPRFG++R REF+MKDAYSF T E + Y MF + Sbjct: 121 ELNSYKKLPVNLFQIQMKYRDERRPRFGLLRGREFIMKDAYSFHSTQESLEEEYQNMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+GL+ P+ A+SG IGG +HEF LA GE + S D+ E + Sbjct: 181 YTKIFTRVGLEFRPVVADSGAIGGSGTHEFHALAAIGEDTIVYSDQ-SDYAANLEMAESV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI----EVGHIFYFGTKYSL 296 D + + E + L ++ S + + E G + Sbjct: 240 DQYTKQDKAPEALEEVHTGDAKTIEAVSSVLGLPEQESIKTVVFKTEQGLVMALVRGDHE 299 Query: 297 PMSATFKGADGKDHYVQMG 315 K G + Sbjct: 300 VNDIKLKNYLGALDIMMAT 318 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 72/225 (32%), Positives = 114/225 (50%), Gaps = 6/225 (2%) Query: 224 SKDFMDFPIPSEN---TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR--VS 278 K D+ + + + + V+ A +D+ + D P+ + Sbjct: 340 MKIVADYAVRALTNSVCGANKSETHYVHVDPSRDFEAEYTDLRFVEEGDVSPDGQGHVKF 399 Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVG +F GT+YS M+ATF GK + MG YGIG R ++AV+E +D +GI Sbjct: 400 ARGIEVGQVFKLGTRYSEGMNATFLDEGGKAQPLIMGCYGIGVSRTMSAVVEQHYDERGI 459 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP ++APF + LI + + + E +Y L+ G V +DD E+ G +FA ADL+ Sbjct: 460 IWPKAIAPFDVHLIAVNGKNAEQLEVAETVYRELTAAGFSVLFDDRKERAGVKFADADLI 519 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G P+++ VG K D VE+K R G E++ +++ + Sbjct: 520 GLPVRINVGKK-APDGIVELKARRGGEAEEIQQADLLEAVRSLYE 563 >gi|319404307|emb|CBI77900.1| Threonyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498] Length = 654 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 83/445 (18%), Positives = 151/445 (33%), Gaps = 39/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD ++ L + S G+ W P G K N+ + +R + Sbjct: 233 KAYLHMLEEAEKRDHRRLGREMDLF--HFQEESPGMIFWHPKGWKMFQNLISYMRRRLDN 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA---DRNDKAMIY--GPTHEEVMTDIF 118 E+ P + LW SG + Y + M + D + Y P + IF Sbjct: 291 HKYAEVQAPQVLDKSLWEISGHWGWYKENMFKTIPAADDWNDEYTYALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + L R E G+MR R F DA+ F + + + Sbjct: 351 KHGLKSYRDLPVRLAEFGLVHRYEPSGSLHGLMRVRSFTQDDAHIFCTEEQLADECLSIN 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L + G K I ++ + P S E A+ T V E + Sbjct: 411 -DLILSTYADFGFKEISLKLSTRPEKRVGSDELWDHAENIMTSVL--------KTIEEKS 461 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 IS+ + A Y + L D++ + ++ FG Sbjct: 462 SGCVKISI---LPGEGAFYGPKFEY---TLTDAIGREWQCGTTQVDFNLPERFG------ 509 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + D + + G+M ++ + G W ++ Sbjct: 510 --AFYIDKDSEKRQPVMIHRAIFGSMERFLGILIENFAGHIPFWLAPQQIVVATIT---- 563 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + +KI +L +G D E+I + L P+ ++ G + + V Sbjct: 564 --SDANEYAKKITEKLKALGLSAKLDSRNEKINYKIREHSLQKVPVILVCGKQEAQTNSV 621 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + + + +E+V Sbjct: 622 NMRRLGSIEQTFLPIEKVFAQLLDE 646 >gi|254516715|ref|ZP_05128774.1| prolyl-tRNA synthetase [gamma proteobacterium NOR5-3] gi|219675138|gb|EED31505.1| prolyl-tRNA synthetase [gamma proteobacterium NOR5-3] Length = 571 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 121/241 (50%), Positives = 164/241 (68%), Gaps = 1/241 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ + +E P DAEI SH+LMLR G+I + S G+Y+W+P+G K L V ++REE Sbjct: 1 MRSSEFLITTHKETPADAEIVSHRLMLRAGLIRKLSSGLYTWMPMGLKVLRKVERVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM++P +Q A+LW ESGR++ YG E+LR+ DR+++ GPTHEEV+TDI R+ Sbjct: 61 MDAAGALEMAMPMVQPAELWQESGRWEQYGPELLRIQDRHNRDFCLGPTHEEVITDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K RDE+RPRFG+MR+REFLMKDAYSF + +Y M + Sbjct: 121 EISSYKQLPLNLYQIQNKVRDEIRPRFGIMRAREFLMKDAYSFHSDQASLEETYQVMHGA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y R+F RLGL P+ A+SG IGG+ SHEF VLAD+GE + S D+ E + Sbjct: 181 YSRVFERLGLDFRPVMADSGSIGGNTSHEFHVLADSGEDAIAFSDS-SDYAANIERAETL 239 Query: 241 D 241 D Sbjct: 240 D 240 Score = 166 bits (419), Expect = 9e-39, Method: Composition-based stats. Identities = 61/187 (32%), Positives = 110/187 (58%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ + D P+ + RGIEVGHIF GTKYS M+A +G++ + MG Y Sbjct: 382 ADLRSVVSGDPSPDGQGSLQIRRGIEVGHIFQLGTKYSEAMNARVLDENGRNVTISMGCY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVG 376 GIG R+VAA IE +HD +GIIWP+++ PF+++++ + H +A E ++A+ + G Sbjct: 442 GIGVSRIVAAAIEQNHDDRGIIWPNAMTPFQLAIVPLNMHKSTAVAEAAEALHAQCLEEG 501 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD E+ G +FA +LLG P ++++G + +++ ++E + R + + + + + Sbjct: 502 IDVLMDDRNERPGVKFADMELLGIPHRIVIGDRSLAEGELEYQGRRDSEAQRVPVAQAMK 561 Query: 437 YASHRFS 443 + + + Sbjct: 562 FLTDQLE 568 >gi|91205350|ref|YP_537705.1| threonyl-tRNA synthetase [Rickettsia bellii RML369-C] gi|122990926|sp|Q1RJ48|SYT_RICBR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|91068894|gb|ABE04616.1| Threonyl-tRNA synthetase [Rickettsia bellii RML369-C] Length = 635 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 159/444 (35%), Gaps = 41/444 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD +L L + ++G+ W G + + IR + + Sbjct: 229 ESYLFMLEEAEKRDHRKLGKELDLF--HFQEEAQGMVFWHDKGWSVYNTIEQYIRRKIRK 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G IE+ P L LW SG ++ + +M + +DK + P + IF+ IK Sbjct: 287 NGYIEVKTPVLVDKSLWELSGHWEKFRDDMF-ALETDDKTLALKPMNCPCHVQIFKQGIK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + L R+E G+MR R + DA+ F + + + + Sbjct: 346 SYRDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETVSF-CKLLT 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G I ++ P S E D + + Sbjct: 405 EVYKDFGFTDIKVKFSDRPEVRAGSSE-----------------TWDKAENALKEAVEKA 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 ++ A Y + L D++ + ++ F + + A++ Sbjct: 448 GYSYTLNPGEGAFYGPKLEF---VLTDAIGRQWQCGTLQMD----FVLPER----LDASY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 A G+ + +G++ ++ + G+ +W + I Sbjct: 497 VAASGEKKRPVMLHRAILGSLERFIGILIEEYAGRFPLW------LAPVQVAIATITSDL 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ L + G V + ++I + P+ ++G + + +V I+ Sbjct: 551 NDYALEVQKALIESGVRVDINISPDKINYKIREFSNQKVPMIAVIGKQEKENKQVTIRRL 610 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 T +E +S+E++I Y S Sbjct: 611 GTTEQEVLSIEQLIEYIREENSKY 634 >gi|313202757|ref|YP_004041414.1| ser-tRNA(thr) hydrolase; threonyL-tRNA synthetase [Paludibacter propionicigenes WB4] gi|312442073|gb|ADQ78429.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Paludibacter propionicigenes WB4] Length = 648 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 79/446 (17%), Positives = 151/446 (33%), Gaps = 40/446 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +Y + + + RD +L L M + KG+ WLP G + +++ Q R Sbjct: 230 EYLVLLEEAKKRDHRKIGKELELF--MFSEMVGKGLPMWLPRGTALRLRLEDFLKKIQRR 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSH 121 ++ P + + L+V SG Y YGK+ + + + P + +I++ Sbjct: 288 FDYQQVMTPHIGNKQLYVTSGHYAKYGKDSFQPIHTPEEGEEYLLKPMNCPHHCEIYKFK 347 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SY+ LP + +R E G+ R R F DA+ F + + K+ Sbjct: 348 PRSYKELPVRLAEFGTVYRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDE-FLKVMDI 406 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 IF+ L ++ + D + + D + Sbjct: 407 IFIIFNALEFENFEAQISLR--------------DPNNREKYIGSDENWEKAEQSIIEAC 452 Query: 241 DIISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L + VE A Y D + D++ ++ ++ Sbjct: 453 AEKGLKARVETGEAAFYGPKLDFM---VRDAIGRKWQLGTIQVDYNLP--------ERFE 501 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + G D + H + G+M AV+ GK +W + I Sbjct: 502 LEYTGEDNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LTPDQVVILPIS 555 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + D +I ++ V DD E+IG + +L P +IVG K + +V + Sbjct: 556 EKFNDYAFQIAKEMNAQDIRVQVDDRNEKIGRKIRDNELKRIPYMLIVGEKEAENGEVSV 615 Query: 419 KHRLTGIREDMSLEEVINYASHRFSN 444 + + G + M + + + Sbjct: 616 RRQGEGDKGTMKVADFSKLILDEVDS 641 >gi|82523942|emb|CAI78664.1| prolyl-tRNA synthetase [uncultured delta proteobacterium] Length = 574 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 126/237 (53%), Positives = 166/237 (70%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ LP L+E P DAE+ SHKLM+R GMI + + GIYS+LPLG + + V I+REE Sbjct: 1 MRYSEMHLPTLREIPSDAEVVSHKLMIRAGMIRKLTSGIYSYLPLGYRVIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P +Q ++LW ESGR+ YGKE+LR DR+D+ +GPTHEEV+TD+ R+ Sbjct: 61 MNKAGAQEVFMPMVQPSELWEESGRWVHYGKELLRFRDRHDRPYCFGPTHEEVITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +K+YR LP YQIQ KFRDE+RPRFGVMR REF MKDAYSFD G+++SY KMF + Sbjct: 121 DVKTYRQLPLNLYQIQTKFRDEVRPRFGVMRCREFGMKDAYSFDADEAGAQNSYEKMFTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF R GL+ P+ A+SG IGG SHEF+V+AD+GE + + + E Sbjct: 181 YNNIFRRCGLRFRPVEADSGSIGGKYSHEFMVMADSGEDAMVFCEKCS-YAANLEKA 236 Score = 177 bits (448), Expect = 4e-42, Method: Composition-based stats. Identities = 71/191 (37%), Positives = 112/191 (58%), Gaps = 2/191 (1%) Query: 256 YAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 A +D+ + DS P K ARGIEVGH+F GTKYS M A + DG++ + Sbjct: 378 VEAYTDLRVVEENDSCPRCAGKIKFARGIEVGHVFKLGTKYSKAMKAVYLDKDGQEKVMI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA IE ++D +GI+WP +AP+ + + + +D+ D E +Y ++ Sbjct: 438 MGCYGIGIGRTVAACIEQNYDDQGIVWPVPLAPYHVIITPVNVNDKSISDVAENLYNKMQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +V DD E+ G +F ADL+G PL+V++G K ++ +KVE+K R TG + ++++E Sbjct: 498 DKKIEVILDDRDERAGVKFNDADLIGIPLRVVIGQKNLAQNKVELKIRKTGENKLIAVDE 557 Query: 434 VINYASHRFSN 444 ++N + Sbjct: 558 IVNEVKEFVNK 568 >gi|56459994|ref|YP_155275.1| prolyl-tRNA synthetase [Idiomarina loihiensis L2TR] gi|81821672|sp|Q5QW31|SYP_IDILO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|56179004|gb|AAV81726.1| Prolyl-tRNA synthetase [Idiomarina loihiensis L2TR] Length = 567 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 123/235 (52%), Positives = 161/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAEI SH+LMLR GMI + + G+Y+W P G + L V ++REE Sbjct: 1 MRSSKYLLSTLKETPSDAEIVSHQLMLRAGMIRKVAAGLYTWTPTGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+E+ +P +Q ADLW ESGR+D YG E+LR+ DRN + + GPTHEE+++ + R Sbjct: 61 MEAINALEILMPMVQPADLWQESGRWDDYGPELLRIKDRNQRDFLLGPTHEEIISQLVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP T +QIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT E + +Y+ M+ + Sbjct: 121 EVSSYKQLPLTLFQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDESLQKTYDDMYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P+ A++G IGG SHEF VLA +GE + S D+ E Sbjct: 181 YCRIFERLGLDYRPVIADTGSIGGSHSHEFHVLASSGEDAIAFSDS-SDYAANVE 234 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 68/187 (36%), Positives = 106/187 (56%), Gaps = 3/187 (1%) Query: 259 TSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 D+ N D + K ARGIEVGHIF G KYS M GK + MG Sbjct: 381 VVDIRNVVAGDPSPCGQGKVKIARGIEVGHIFQLGKKYSDAMKVGVLSESGKHETLTMGC 440 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV 375 YGIG R+VAA IE ++D +GI WP+++APF++ ++ + H ++A EK+Y L Sbjct: 441 YGIGVSRIVAAAIEQNNDERGICWPEALAPFQVVIVPMNMHKSARVQEAAEKLYTDLKAQ 500 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV +DD E+ G F +L+G P QV+VG + + +++VE + R G ++ ++L++ I Sbjct: 501 GIDVLFDDRKERPGVMFTDMELIGIPHQVVVGERNLDENQVEYQSRKGGEKQKINLDDCI 560 Query: 436 NYASHRF 442 ++ + Sbjct: 561 SFIQQQL 567 >gi|330896119|gb|EGH28340.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 571 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 117/237 (49%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + +Y+WLP G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASVLYTWLPRGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E + +Y++M ++ Sbjct: 121 ELNSYKQLPINLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADHESLQVTYDRMHLA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF RLGLK P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YSNIFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSD-GSDYAANIEKA 236 Score = 159 bits (402), Expect = 8e-37, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 111/207 (53%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ K RGIEVGHIF GTKYS M Sbjct: 364 DDKHYFGVNWERDLPVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGTKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK + MG YGIG RVVAA IE + D GIIW D +APF+I+L+ ++ Sbjct: 424 KCQVLGENGKPVNLAMGCYGIGVSRVVAAAIEQNSDENGIIWNDILAPFQIALVPLRYET 483 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 R+A +K+YA L+ G +V DD + G +FA +L+G P +++V + +++ + Sbjct: 484 DAVREATDKLYADLTAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNL 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K R + +++ +V+++ + + Sbjct: 544 EYKSRTESQPQAIAVADVLSFIQGKVN 570 >gi|206889512|ref|YP_002249047.1| threonyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741450|gb|ACI20507.1| threonyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 617 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 84/444 (18%), Positives = 154/444 (34%), Gaps = 41/444 (9%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E RD +L L + + G+ WLP G + ++E + G Sbjct: 211 YLNFLEEVKKRDHRRLGKQLRLFE-ISEEVGPGLIIWLPNGAIVRKIIEDFWKDEHLKAG 269 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + DLW +SG D Y + M + ++ A P + +++S ++SY Sbjct: 270 YQLLYTPHIARLDLWRKSGHLDFYRENMYSPMEIDEIAYQLKPMNCPFHIQVYKSELRSY 329 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP F ++ +R E G++R R F DA+ F T E + K+ + I Sbjct: 330 RELPLRFAELGTVYRYERSGVLHGLLRVRGFTQDDAHIFC-TEEQLEEEIQKVLDFTVFI 388 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G + + + P S E + + Sbjct: 389 LSTFGFTAYDIYISTRPEKYVGSIE-----------------NWEKATFALEEALKTRNL 431 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I Y D+ K+ D L + + S ++ T++G Sbjct: 432 PYQIDPGEGVFYGPKIDI---KIKDVLNRSWQCSTIQVDFNIP--------ERFDITYRG 480 Query: 305 ADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DGK+H M + R + +IE + + Sbjct: 481 KDGKEHRPIMIHRALMGSLERFMGVLIEHYAGAFPLWLAPVQIEVMSI-------SEKHA 533 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D ++Y +L V + E+IG + A L P VI+G K + ++ + ++ R Sbjct: 534 DYAARVYRQLINNDFRVKLNIDNEKIGYKIRNATLNKVPYMVIIGDKEIENNAITVRKRD 593 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 E + E+ I + + + + Sbjct: 594 GENFELIKFEKFIEFLVNDIKDKK 617 >gi|91786735|ref|YP_547687.1| prolyl-tRNA synthetase [Polaromonas sp. JS666] gi|123356060|sp|Q12FA3|SYP_POLSJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|91695960|gb|ABE42789.1| prolyl-tRNA synthetase [Polaromonas sp. JS666] Length = 580 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 119/237 (50%), Positives = 157/237 (66%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SH+LM+R GMI + GIYS++P+G + + V AI+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHQLMMRAGMIKKLGAGIYSYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+EM++P +Q A+ W E+GR++ G E+LR+ DR+ + + PT EEV+TD+ R Sbjct: 61 MNRAGAVEMTMPVIQPAEFWQETGRFEKMGPELLRIKDRHGRDFVVQPTSEEVITDVMRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE RPRFG+MR REF MKDAYSFD +K SY M + Sbjct: 121 DIKSYKQLPKNLYQIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDQASAKASYQIMAQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R GL + A+SG IGGDLS EF V+A TGE + D+ E Sbjct: 181 YRRIFDRFGLTYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYC-PGSDYAANMEKA 236 Score = 163 bits (413), Expect = 5e-38, Method: Composition-based stats. Identities = 70/188 (37%), Positives = 108/188 (57%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N + P+ K V RGIEVGH+FY GTKYS M+ATF +GK +++MG Sbjct: 392 VADLRNVVAGNPSPDGKGVLAIERGIEVGHVFYLGTKYSQAMNATFLDENGKPQFLEMGC 451 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD-QVCRDACEKIYARLSKV 375 YGIG R+ AA IE +HD +GIIWPD++APF + + I + A +K+Y L Sbjct: 452 YGIGITRLPAAAIEQNHDERGIIWPDAIAPFTVVICPISPDRFADVKAAADKLYGELLAA 511 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD GE+ G+ FA +L+G P +V +G + + + ++E +HR + + Sbjct: 512 GVDVILDDRGERPGAMFADWELIGVPHRVTIGDRGLKEGQLEYQHRRDAASSKVDAATAL 571 Query: 436 NYASHRFS 443 ++ + + Sbjct: 572 DFLKGKLA 579 >gi|51893696|ref|YP_076387.1| threonyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863] gi|73919833|sp|Q67LA3|SYT_SYMTH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|51857385|dbj|BAD41543.1| threonyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863] Length = 651 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 83/442 (18%), Positives = 157/442 (35%), Gaps = 41/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + G WL G + + R+ Q G Sbjct: 234 YLFRLEEARRRDHRRLGPELGLYR--FEEVAPGFAFWLDKGYRLYRELENWSRKLQEARG 291 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+S P + S+ L+ SG + Y + M D+ P + +++S I+SY Sbjct: 292 YEEVSTPWIVSSKLYETSGHWQHYRQNMF-EIRAEDQDFATKPMNCPCHCVLYKSQIRSY 350 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R E G++R R F DA+ + P+ + ++ I Sbjct: 351 RDLPLKIAEYGPLSRFEASGTLHGLLRVRGFHQDDAH-LFVRPDQIEEQIREVIGLVDTI 409 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + LGL+ + + P E + + D + Sbjct: 410 YGTLGLEYEI-KLSTRPEDFMGDIE-----------------LWNEAEAALARALDGMGR 451 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y D + D+L + + ++ F K+ T+ G Sbjct: 452 SYKLNPGDGAFYGPKLDFD---VTDALGRKWQCATVQLD----FQLPIKFD----LTYIG 500 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DGK+H + +G + ++ + +P +AP + ++ I Sbjct: 501 EDGKEHRPVMIHRAIMGTLERFIGILT---EHYAGNFPLWMAPVQARVLPITDRHH---A 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ A+L + G V D E++G + A+LL P ++VG K V ++ R Sbjct: 555 YAGEVVAKLQEAGLRVEGDYRNEKVGYKIREAELLKIPFILVVGDKEAEAGAVAVRRRGM 614 Query: 424 GIREDMSLEEVINYASHRFSNN 445 M L + + A ++ Sbjct: 615 KDLGPMPLADFLALAQSEIASK 636 >gi|304415438|ref|ZP_07396087.1| threonyl-tRNA synthetase [Candidatus Regiella insecticola LSR1] gi|304282702|gb|EFL91216.1| threonyl-tRNA synthetase [Candidatus Regiella insecticola LSR1] Length = 652 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 78/452 (17%), Positives = 145/452 (32%), Gaps = 50/452 (11%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + + G+ W G + + +R + Sbjct: 232 YLQKIEEAAKRDHRKIGKQLDLY--HMQEEAPGMVFWHHNGWTIFRELESFVRAKLQEYQ 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y + M ++ P + IF +KSY Sbjct: 290 YQEVKGPLMMDRLLWAKTGHWENYAENMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F T + + N + Sbjct: 349 RDLPLRMAEFGSCHRNESSGALHGLMRVRAFTQDDAHIFC-TEQQVRAEVNNCIAMIYDM 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + I ++ + P S E A+ + Sbjct: 408 YRVFGFEKIEVKLSTRPEKRIGSDEIWTAAE-----------------NDLAAALTENGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D L + ++ G A++ Sbjct: 451 AFDWQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFSLPGRLG--------ASYID 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + V + +G++ ++ + +P +AP + +INI D Sbjct: 500 ENSQRTVPVMIHRAILGSIERFIGILI---EEYAGCFPTWLAPVQAVVINITDKH---VD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS-KVEIKHRL 422 +KI L G V D E++G + L P ++ G K V KV ++ Sbjct: 554 YAKKISTALQHAGIRVKTDLRNEKVGLKIREHTLRRVPYMLVCGDKEVESGNKVSVRTLG 613 Query: 423 T---------GIREDMSLEEVINYASHRFSNN 445 T L+ ++ N Sbjct: 614 TRTRSGAYHSKDLGSCDLDVILERLLTEIGNR 645 >gi|34496029|ref|NP_900244.1| prolyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472] gi|81834766|sp|Q7P0J3|SYP_CHRVO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|34101883|gb|AAQ58250.1| prolyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472] Length = 568 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 123/235 (52%), Positives = 161/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ L+E P DA+I S KLM+R G I + + GIYSW+P+G + + V IIREE Sbjct: 1 MRASQFFISTLKEAPADADITSQKLMIRAGFIRKQAAGIYSWMPMGLRVVRKVETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR G IE+S+P +Q A+LW E+GR+D+ G E+LR DR+++ PT EEV+TDI R Sbjct: 61 MNRAGGIEVSLPVVQPAELWQETGRWDAMGAELLRFKDRHERDFALQPTAEEVITDIARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP FYQIQ KFRDE RPRFGVMR REF MKDAYSFD + E + SY+ M+ + Sbjct: 121 ELRSYRALPKNFYQIQTKFRDERRPRFGVMRGREFTMKDAYSFDRSAEDAGKSYDNMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL + A++G IGGD SHEF V+ADTGE + ++ E Sbjct: 181 YRRIFDRLGLTYRAVAADTGAIGGDRSHEFQVIADTGEDAIVYCPT-SEYAANIE 234 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 109/196 (55%), Gaps = 3/196 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 D+ N D P+ + RGIEVGH+FY GTKYS M+ATF DGK Sbjct: 373 GRDCAEPEVFDIRNVVEGDPSPDGQGALAIQRGIEVGHVFYLGTKYSAAMNATFLDEDGK 432 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 +MG YGIG R++ A IE ++D KG+IWPDS+APF + + + + ++A +K Sbjct: 433 PKPFEMGCYGIGVTRILGAAIEQNYDDKGMIWPDSIAPFAVVVCPVGYDRSEAVKEAADK 492 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +YA L G DV DD GE+ G+ FA +L+G P +V +G + + + KVE +HR Sbjct: 493 LYADLQARGVDVMLDDRGERPGAMFADWELIGAPHRVTIGDRGLKEGKVEYQHRRDSEAT 552 Query: 428 DMSLEEVINYASHRFS 443 ++ + ++ + + + Sbjct: 553 AVAADAILEHVLSKLA 568 >gi|303326973|ref|ZP_07357415.1| proline--tRNA ligase [Desulfovibrio sp. 3_1_syn3] gi|302862961|gb|EFL85893.1| proline--tRNA ligase [Desulfovibrio sp. 3_1_syn3] Length = 580 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 125/261 (47%), Positives = 170/261 (65%), Gaps = 1/261 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S ++P L+E+P DAE+ SHKL+LR GM+ + + G+Y +LPLG K +D + ++REE Sbjct: 1 MRFSSCYIPTLKESPADAEVVSHKLLLRAGMVRRLTSGLYIYLPLGLKIIDKIARVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N +G E+ +P +Q ADLW E+GR++ YGKE+LR DRN++ GPTHEEV+TD+ R Sbjct: 61 INASGFQELLMPMVQPADLWKETGRWEHYGKELLRFKDRNERDYCLGPTHEEVITDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKD YSFD G++ SY M+ + Sbjct: 121 EVRSYRQLPVRLYQIQSKFRDEIRPRFGLMRGREFMMKDGYSFDADIAGAEESYKLMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGLK + A++G IGG+ SHEF+VLADTGE + D D+ E + Sbjct: 181 YTRIFKRLGLKFRAVEADTGSIGGNFSHEFMVLADTGEDTIAFCHDC-DYAANVERAEVV 239 Query: 241 DIISLNSIVEQWTAPYAATSD 261 + P D Sbjct: 240 WKGEACTEACAGACPDYEKVD 260 Score = 162 bits (411), Expect = 7e-38, Method: Composition-based stats. Identities = 74/180 (41%), Positives = 100/180 (55%), Gaps = 2/180 (1%) Query: 253 TAPYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A A +D+ D P +GIEVGHIF G KYS M A F +GK+ Sbjct: 377 DAAITAWADLRAITPEDVCPRCGGRIELTKGIEVGHIFMLGLKYSESMHAAFLDENGKEK 436 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + MG YGIG RV AA IE +HD GI++P VAPF+ L+N+ + E+IYA Sbjct: 437 LMIMGCYGIGVSRVAAAAIEQNHDENGIVFPPPVAPFECILLNLDPRNAEVTAKAEEIYA 496 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L +G DV DD E+ G +F ADLLG P+Q++VG K ++ VE K R +G + ++S Sbjct: 497 MLRDMGVDVLLDDREERPGVKFKDADLLGAPMQLVVGGKGLARGIVECKDRRSGEKGELS 556 >gi|325478873|gb|EGC81983.1| threonine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13] Length = 640 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 148/442 (33%), Gaps = 42/442 (9%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + + +E RD ++ L H+ G + P G ++ + + N G Sbjct: 232 YEELQKEIEKRDHRKIGREMNLFA--FHEEGPGFPFFHPNGMILMNELLGWWTDVLNENG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW SG +D Y + M + + +A P + + ++ SY Sbjct: 290 YGEIKTPLILNEALWHRSGHWDHYKENM-YFTEIDGEAYAVKPMNCPGSVLTYAANQHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R EL G+ R R F DA+ + TP K +M + Sbjct: 349 RDLPIRLAEYGQVHRHELSGTLHGLFRVRTFTQDDAHVYC-TPNQIKEEVYRMIDLADLL 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K + P DF ++ Sbjct: 408 YSTFGFKYTI-ELSTRP-----------------DDFMGDIKDWDFAEEQLKKALEERGI 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I A Y D H L D+ + ++ F + T+ Sbjct: 450 EYEINPGDGAFYGPKIDFH---LLDAAKREWQCGTIQLD----FQLPQNFD----LTYID 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G+ + +G++ V+ G+ +W + I D Sbjct: 499 ENGEKQRPVMLHRALLGSIERFIGVLTEHFAGRFPLW------LNPQQVEIIPVSDKFID 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E++ ++ + G V D E +G + A L+ ++VG K + K+ +++R Sbjct: 553 YAEELKQKIKEAGFRVNIDYRNEGVGYKIRQAQLMRTNYMLVVGEKEETSGKLTVRNRDG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 D+SL+E I S ++ Sbjct: 613 EETPDVSLDEFIEKISEEKASK 634 >gi|313201958|ref|YP_004040616.1| prolyl-tRNA synthetase [Methylovorus sp. MP688] gi|312441274|gb|ADQ85380.1| prolyl-tRNA synthetase [Methylovorus sp. MP688] Length = 574 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 116/233 (49%), Positives = 169/233 (72%), Gaps = 1/233 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ +E P++AE+ SH+LMLR G+I + G+Y+W+PLG + L V ++R+E Sbjct: 1 MRASQFFIATQKEAPQEAELPSHRLMLRAGLIKRLGSGLYTWMPLGLRVLRKVETVVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q A+LW E+GR+D +G +ML++ DR++++ +GPTHEEV+TD+ R Sbjct: 61 MNKAGALELLMPAVQPAELWQETGRWDVFGPQMLKITDRHERSFCFGPTHEEVITDLARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + E + +Y M+ + Sbjct: 121 EIKSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFVMKDAYSFHTSLESLEATYATMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y +F+RLGLK +RA++G IGGD SHEF VLAD+GE + D+ Sbjct: 181 YSNVFNRLGLKFRAVRADTGAIGGDGSHEFHVLADSGEDALAYC-PASDYAAN 232 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 67/188 (35%), Positives = 108/188 (57%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K V RGIEVGHIF TKY+ M+AT++ +G+ ++MG Sbjct: 387 VADIRNVINGDPSPDGKGVLELCRGIEVGHIFQLRTKYAEAMNATYQAENGELKIMEMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKV 375 YGIG R+V A IE +D +GII+P ++APF +++ I +DA +YA L + Sbjct: 447 YGIGVSRIVGAAIEQGNDARGIIFPAAMAPFSVAIAPIGMDRSDAVKDATLALYAELQQA 506 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD GE+ G FA +L+G P +V++G + + + +VE + R + ++L E++ Sbjct: 507 GIDVLLDDRGERPGVMFADLELIGIPHRVVIGDRGLKEGQVEYQARTDEQAQSVALSEIV 566 Query: 436 NYASHRFS 443 + + Sbjct: 567 SKLKQALA 574 >gi|167624874|ref|YP_001675168.1| prolyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4] gi|189083514|sp|B0TNJ5|SYP_SHEHH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|167354896|gb|ABZ77509.1| prolyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4] Length = 570 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 122/240 (50%), Positives = 164/240 (68%), Gaps = 1/240 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YSWLP G + L + AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVVSHQLMLRAGMIRRNASGLYSWLPTGLRVLRKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ G++E+ +P +Q ADLWVE+GR++ +G E+LR DR+++ + GPTHEEV+TDI R Sbjct: 61 MNKAGSVEILMPMVQPADLWVETGRFEKFGPELLRFQDRHNRDFVLGPTHEEVITDIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E +Y MF + Sbjct: 121 EVNSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHIDQETMDETYEAMFQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y I RLGL P+ A++G IGG +SHEF VLA++GE + D+ E + Sbjct: 181 YNNILTRLGLSFRPVMADTGSIGGSMSHEFHVLANSGEDLIAY-STESDYAANIEKCEAP 239 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 71/190 (37%), Positives = 110/190 (57%), Gaps = 3/190 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P AA D+ N + P K V A RGIEVGHIF GT YS M+A +GK + Sbjct: 379 PEAAAFDLRNIIEGEPSPCGKGVIALLRGIEVGHIFQLGTNYSEAMNANVLDQNGKSKTL 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYAR 371 MG YG+G R+VAA IE ++D +GIIWPD++APF + ++ + +D E++Y Sbjct: 439 LMGCYGVGVSRMVAAAIEQNNDDRGIIWPDAIAPFTVGILPMNMHKSHRVKDIAEQLYQD 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G +V +DD E+ G FA +L+G P V++G + + + E K+R TG ++D+ L Sbjct: 499 LNDAGIEVMFDDRKERPGVMFADMELIGIPHVVVIGDRNIDNGMFEYKNRRTGEKQDIPL 558 Query: 432 EEVINYASHR 441 +++ + + Sbjct: 559 GDIVEFLKAQ 568 >gi|296132879|ref|YP_003640126.1| prolyl-tRNA synthetase [Thermincola sp. JR] gi|296031457|gb|ADG82225.1| prolyl-tRNA synthetase [Thermincola potens JR] Length = 579 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 120/265 (45%), Positives = 172/265 (64%), Gaps = 5/265 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ P L+E P +AE+ SH LMLR G I + + GIY++LPL + + V+ I+REE Sbjct: 1 MRASEILAPTLREVPAEAEVISHILMLRAGFIRKSASGIYTYLPLANRVIKKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G E+ +P +Q A+LW ESGR+D YG E+ RL DR+ ++ GPTHEE++TD+ R+ Sbjct: 61 MDRKGGQELILPIMQPAELWQESGRWDVYGDELFRLKDRHGRSFALGPTHEEIITDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ +P YQIQ K+RDE RPRFG+MR REF+MKD YSFD G SYNKMF + Sbjct: 121 EIRSYKQMPMLLYQIQNKYRDERRPRFGLMRGREFIMKDLYSFDRDEAGLDESYNKMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y R+F R GLK P+ A+SG IGG +HEF+VLA++GE + + ++ E + Sbjct: 181 YTRVFSRCGLKFRPVEADSGAIGGSSTHEFMVLAESGEAAIVYCTEC-EYAANVEKAEAC 239 Query: 241 DIISLNSI----VEQWTAPYAATSD 261 + ++ + +E+ P A T + Sbjct: 240 SVDTVTPMDMLPMEEVATPNARTIE 264 Score = 183 bits (463), Expect = 6e-44, Method: Composition-based stats. Identities = 76/188 (40%), Positives = 112/188 (59%), Gaps = 2/188 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ + + P ARGIEVG IF GTKYS + A F +GK+ Y+ MG Sbjct: 380 EADIRIVQAGEPCPRCNGTLAMARGIEVGQIFKLGTKYSKALGAKFLDENGKEQYIVMGC 439 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R VAA IE +HD GIIWP S+APF++ ++ + A + E+IY++L + G Sbjct: 440 YGIGITRTVAAAIEQNHDQDGIIWPMSIAPFQVIVVPVSAKSSEQVELAERIYSQLLEAG 499 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G +F ADL+G+P++V VG+K V + +VE++ R TG D+ +EEV+ Sbjct: 500 IEVIIDDRNERPGVKFKDADLIGYPIRVTVGNKAVDEGRVEVRLRKTGDTRDLPVEEVVT 559 Query: 437 YASHRFSN 444 Y + Sbjct: 560 YVKNLVDE 567 >gi|217969648|ref|YP_002354882.1| prolyl-tRNA synthetase [Thauera sp. MZ1T] gi|217506975|gb|ACK53986.1| prolyl-tRNA synthetase [Thauera sp. MZ1T] Length = 582 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 127/235 (54%), Positives = 164/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L L+E P DAE+ S KLMLR GMI + + GIYS++P+G +A+ V AI+REE Sbjct: 1 MRASQFHLFTLKEAPSDAEVVSQKLMLRAGMIRKVAAGIYSYMPMGLRAIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW E+GR+D G E+LR DR+++ PT EEV+TDI R Sbjct: 61 MDRAGAMELIMPMVQPAELWDETGRWDKMGDELLRFKDRHERDFALQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP FYQIQ KFRDE RPRFGVMR REF MKDAYSFD + E + SY+ MF + Sbjct: 121 ELKSYRQLPKNFYQIQTKFRDERRPRFGVMRGREFTMKDAYSFDRSEEAAGRSYDIMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL+ + A++G IGGD SHEF V+ADTGE + D D+ E Sbjct: 181 YKRIFDRLGLEYRAVAADTGAIGGDRSHEFQVIADTGEDAIVYCPD-SDYAANIE 234 Score = 166 bits (419), Expect = 8e-39, Method: Composition-based stats. Identities = 69/188 (36%), Positives = 104/188 (55%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + V RGIEVGH+FY GTKYS M+ATF DGK + +MG Sbjct: 393 VADLRNVVEGDPSPDGRGVLAIQRGIEVGHVFYLGTKYSKAMNATFLDEDGKPKHFEMGC 452 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R++ A IE +HD +GI+WP ++APF++ + + Q RD +K+Y L Sbjct: 453 YGIGVTRILGAAIEQNHDARGIVWPRAIAPFEVVVCPVGWGKSQAVRDEAQKLYDALVAT 512 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G D DD E+ G FA +L+G P +V +G + + + +E + R + EV+ Sbjct: 513 GVDAILDDRDERPGVMFADWELIGVPHRVTIGDRGLKEGVIEYQGRRDAEAAKLPAGEVL 572 Query: 436 NYASHRFS 443 + R + Sbjct: 573 GHVLERLN 580 >gi|251793646|ref|YP_003008376.1| prolyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700] gi|247535043|gb|ACS98289.1| hypothetical protein NT05HA_1971 [Aggregatibacter aphrophilus NJ8700] Length = 571 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 122/243 (50%), Positives = 161/243 (66%), Gaps = 1/243 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L+E P +A + SH+LMLR GMI + G+Y+WLP G + L V IIR+E Sbjct: 1 MRTSKYLFSTLKETPAEAAVVSHQLMLRAGMIRPLASGLYNWLPTGLRVLKKVENIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GAIE+ +P +Q A+LW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKSGAIEVEMPVVQPAELWQESGRWEQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP YQIQ KFRDE+RPRFGVMR REFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 EVSSYRQLPLNLYQIQTKFRDEVRPRFGVMRGREFLMKDAYSFHTSKESLQETYDVMYQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA++GE V D+ E + Sbjct: 181 YSNIFSRLGLDFRAVQADTGSIGGSASHEFQVLANSGEDDVIF-STESDYAANIELAEAV 239 Query: 241 DII 243 I Sbjct: 240 AIG 242 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 113/207 (54%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D +I + +D+ N D P+ K + RGIEVGHIF G KYS M Sbjct: 364 DGKHYFNINWERDVALPKVADIRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGDKYSKAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 +AT +G DG+ + MG YGIG RVVAA IE HD + I D +APF ++++ + Sbjct: 424 NATVQGEDGRPMVLTMGCYGIGVTRVVAAAIEQHHDERGIIWPCDEMAPFTVAIVPMNMH 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + ++ E +Y L G +V +DD E+ G FA +L+G P V++G K +++ ++ Sbjct: 484 KSESVQEFAEDLYRTLLAQGVEVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K+R TG ++ ++ ++++++ + Sbjct: 544 EYKNRRTGEKQMIAKDQLLDFLKSQVK 570 >gi|85375301|ref|YP_459363.1| threonyl-tRNA synthetase [Erythrobacter litoralis HTCC2594] gi|123293655|sp|Q2N6X5|SYT_ERYLH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|84788384|gb|ABC64566.1| threonyl-tRNA synthetase [Erythrobacter litoralis HTCC2594] Length = 672 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 81/455 (17%), Positives = 151/455 (33%), Gaps = 49/455 (10%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ L L+E RD ++ L + + + G W P G K + A +R + Sbjct: 241 KQLNAHLHRLEEAAKRDHRKLGREMDLF--HLQEEAHGSVFWHPQGYKIWRELEAYMRRK 298 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD-------------RNDKAMIYG 107 + G E+ P + A W +SG + Y + M + D ++ M Sbjct: 299 MDGAGYREIKTPQVMDARQWEQSGHWGKYRENMFVIPDEIPNTEDEGELVSKDADWMALK 358 Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLT 166 P + +F+ I SYR+LP ++ R+E G+MR R+F DA+ F Sbjct: 359 PMNCPAHVLVFKQGITSYRDLPIRLGEMGCCHRNEPHGALHGLMRVRQFTQDDAHIFCTE 418 Query: 167 PEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 + + + F +R ++ P S E A+ Sbjct: 419 DQVVEE--VRAFCKLADEVYRDFGFDYDVKLALRPEQRFGSEEDWDKAEQELRDAVAEAG 476 Query: 227 FMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGH 286 + E + A YA + H L D++ +V + Sbjct: 477 MANDDYGWEE------------LPGEGAFYAPKLEWH---LTDAIGRTWQVGTIQGDRVL 521 Query: 287 IFYFGTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 + AT+ G DG H + G+ ++ G+ +W Sbjct: 522 P--------ERLDATYVGEDGGKHRPVMLHRAIFGSYERFIGILIEHFAGRLPVWLAPTQ 573 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405 +++ ++ A+L G V D E+I + L P ++ Sbjct: 574 AVVATIV------SDADGYAKEAVAKLEAAGIRVDGDLRNEKINFKVREHSLAKVPHLLV 627 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 VG + + V ++ ++ MSL++ I Sbjct: 628 VGKREAEEGTVAVRTLGEKEQQVMSLDDAIAMLKD 662 >gi|154249367|ref|YP_001410192.1| prolyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1] gi|171769336|sp|A7HKV2|SYP_FERNB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|154153303|gb|ABS60535.1| prolyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1] Length = 574 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 107/261 (40%), Positives = 161/261 (61%), Gaps = 3/261 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+++ P L+E P DAE+ S +L+ R G I + + G+Y++LPLG++ L + I+REE Sbjct: 1 MRFSQFYAPTLKEAPADAEVPSQELLTRAGFIRKIAAGVYTYLPLGRRVLLKIEKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P +Q A+LW +SGR++ YG EM++L DR+ + GPTHEE++T + ++ Sbjct: 61 MDNIGANEILMPIIQPAELWKQSGRWEDYGPEMMKLKDRHGRDFTLGPTHEELVTFLVQN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP T YQ+ K+RDE+RPRFGV+R+REF+MKD YSF E +Y + Sbjct: 121 ELNSYKQLPITLYQMANKYRDEIRPRFGVLRAREFIMKDGYSFHSDWESLDETYKAHRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y I R+GLK + A SG IGG+ SHEF+ ADTGE+ V + + E + Sbjct: 181 YSNIMERIGLKYAVVEASSGAIGGNESHEFVAFADTGESNVLFCECG--YAGNDERVPYT 238 Query: 241 -DIISLNSIVEQWTAPYAATS 260 +II N ++ Y Sbjct: 239 GEIIYDNEELKGMEKVYTPNV 259 Score = 143 bits (360), Expect = 7e-32, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 101/193 (52%), Gaps = 7/193 (3%) Query: 260 SDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ + D P + +GIE+GHIF GTKYS M + + DG+ MG Y Sbjct: 380 ADLIVTREGDPCPVCGKPLNAKKGIELGHIFKLGTKYSEAMGSKYMDKDGQLKPFIMGCY 439 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G G R + A++E HD KGIIWP SVAPF + + + ++++ E++Y L + G Sbjct: 440 GWGVSRTLGAIVEQLHDEKGIIWPLSVAPFAVVITPV-SNNENLMKFSEELYNFLVEKGE 498 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS--LEEVI 435 +V DD G +F ADL+G P +V VG K +S+ VEIK R TG + + LEE+ Sbjct: 499 EVLLDDRNISPGMKFNDADLIGIPFRVTVG-KALSEGMVEIKWR-TGQQFKVKATLEEIY 556 Query: 436 NYASHRFSNNRPV 448 + P Sbjct: 557 EFLQKSKQEYDPH 569 >gi|87309081|ref|ZP_01091218.1| threonyl-tRNA synthetase [Blastopirellula marina DSM 3645] gi|87288072|gb|EAQ79969.1| threonyl-tRNA synthetase [Blastopirellula marina DSM 3645] Length = 668 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 145/442 (32%), Gaps = 39/442 (8%) Query: 11 LQENPR-DAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 L+E R D +L L I+ +G+ WLP G + + E+ + Sbjct: 238 LEEAKRRDHRTLGKQLELFA--INPLVGQGLILWLPKGAVVRQQLTDFVSEQLKKHEYES 295 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 + P + DL+ SG Y Y +D+ + P + I+++ +SYR Sbjct: 296 VFTPNIGKVDLYKTSGHYPYYKDSQFPPIHVSDDEEYLLKPMNCPHHIMIYKNRPRSYRE 355 Query: 128 LPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP + +R E G+ R R F DA+ F + E + + K + + Sbjct: 356 LPVRLSEFGTVYRYEQSGELNGMTRVRGFCQDDAHIFCM-EEQVEEEFRKCIEMTQYVLN 414 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 LGL +R D + + D S + ++ Sbjct: 415 SLGLTDYRVRL--------------GFRDPDNGKYVGNSKVWDRAEQSLVSVCKNMGIDA 460 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 A Y +D + D L ++ ++ + + + GAD Sbjct: 461 VAEAGEAAFYGPKADF---VVNDCLGREWQLGTVQLDYNLP------STERFALEYVGAD 511 Query: 307 GKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + H M R + +IE + + Q + Sbjct: 512 NQMHRPVMIHRAPFGSLERFMGVLIEHFAGAFPLWLAPEQVRVLVV-------SQKFEEY 564 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 K+ A L + G V D E+IGS+ A L P ++G + + V ++ R+ G Sbjct: 565 ARKVEAELKQAGFRVKGDYRPEKIGSKIRDAQLELIPYMFVIGGREMETESVAVRDRIDG 624 Query: 425 IREDMSLEEVINYASHRFSNNR 446 M + E I+ + + Sbjct: 625 DLGSMKVAEAIDKLKQEVAERK 646 >gi|257463827|ref|ZP_05628214.1| threonyl-tRNA synthetase [Fusobacterium sp. D12] gi|317061364|ref|ZP_07925849.1| threonyl-tRNA synthetase [Fusobacterium sp. D12] gi|313687040|gb|EFS23875.1| threonyl-tRNA synthetase [Fusobacterium sp. D12] Length = 637 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 79/439 (17%), Positives = 157/439 (35%), Gaps = 42/439 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 FL +++E RD +L L + ++ G +LP G + + + R E + G Sbjct: 230 FLKLMEEAEKRDHRKLGKELELF--FLSEYGPGFPFFLPKGMVLRNTLIDLWRAEHEKAG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +++ P + + +LW SG + +Y + M + +D P + F+ SY Sbjct: 288 YVQIDTPIMLNRELWEISGHWFNYRENMYTSS-IDDVDFAIKPMNCPGGVLAFKYQQHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ R E G+ R R F D++ F +T E + + + Sbjct: 347 RDLPARVAELGKVHRHEFSGALHGLFRVRAFTQDDSHIF-MTEEQIESEIIGVVNLIDKF 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + +L + + P + E + + + Sbjct: 406 YSKLFGFQYSIELSTRPEKSIGTDE-----------------IWEKAEAALAGALHHLGR 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D K+ D++ + ++ F ++ T+ G Sbjct: 449 EFKINEGDGAFYGPKLDF---KIKDAIGRTWQCGTIQLD----FNLPERFD----VTYVG 497 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + G++ ++ + G +W V +++ + C Sbjct: 498 EDGEKHRPVMIHRVIYGSIERFIGILIEHYAGAFPMWLAPVQIKVLTI------NDDCVS 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEIKHRL 422 ++I +L + G DD E IG + A+ P+QVI+G + +V I+ Sbjct: 552 YAKEIVEKLKEQGIRAELDDRSESIGYKIREANGRYKIPMQVIIGKNEIEKKEVNIRRFG 611 Query: 423 TGIREDMSLEEVINYASHR 441 + +E M L + Sbjct: 612 SQAQESMDLNAFLAMVKEE 630 >gi|56965736|ref|YP_177470.1| threonyl-tRNA synthetase [Bacillus clausii KSM-K16] gi|56911982|dbj|BAD66509.1| threonyl-tRNA synthetase [Bacillus clausii KSM-K16] Length = 637 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 74/442 (16%), Positives = 150/442 (33%), Gaps = 41/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 YF + + R+ +L L M + + G+ +L GQ + + + +R Q + Sbjct: 233 YFAFLEEAEKRNHRKLGKELELF--MFSEEAPGMPFYLANGQIIRNELESFLRNLQAKYD 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW +SG +D Y + M +++ P + IF++ + SY Sbjct: 291 YKEVRTPIMMNQRLWEQSGHWDHYKENM-YFTQVDEQQFALKPMNCPGHMLIFKNGLHSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R E G++R R F DA+ F TP+ + + Sbjct: 350 RDLPIRMAEFGQVHRHEFSGALNGLLRVRTFCQDDAHIFV-TPQQIEEEITLALKIIDHV 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K + P S+ + + + Sbjct: 409 YQVFGFKYEI-ELSTRP-----------------DDFMGSEHLWEQAETALENVLQKLNY 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D+H + D++ + + + ++ F K+ T+ Sbjct: 451 AYKVNEGDGAFYGPKIDIH---IKDAIQRSHQCATVQLD----FQLPEKFD----LTYID 499 Query: 305 ADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + G++ ++ G +W + I V D Sbjct: 500 KQNEKKRPVVIHRAVFGSIDRFLGILIEHFAGAFPVW------LAPVQVQIVPVSHVHLD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C I + L +VG V D+ E++G + A + P +++G + + V ++ Sbjct: 554 YCLTIQSELKQVGVRVNIDESDEKLGYKIRKAQMQKIPCTIVLGDNELKEETVTVRQYGK 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 E + E + Sbjct: 614 PETERVPFEYFKEKLVRQIKER 635 >gi|323344262|ref|ZP_08084488.1| threonine--tRNA ligase [Prevotella oralis ATCC 33269] gi|323094991|gb|EFZ37566.1| threonine--tRNA ligase [Prevotella oralis ATCC 33269] Length = 654 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 79/444 (17%), Positives = 153/444 (34%), Gaps = 36/444 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L T + KG+ WLP G + + ++R+ Q R Sbjct: 232 EYLVMLEEAKKRDHRKIGKEMELFT-FSERVGKGLPIWLPKGTELRLRLQDMLRKIQKRF 290 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P + S +L+V SG Y YGK+ + D+ + P + ++F Sbjct: 291 GYQEVITPHIGSKNLYVTSGHYAHYGKDSFQPIHTPEEDEEYMLKPMNCPHHCEVFAWKP 350 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + +R E G+ R R F DA+ F + + ++ Sbjct: 351 RSYKDLPLRIAEFGTVYRYEKSGELHGLTRVRSFTQDDAHIFCRPDQVKSE-FLRVMDII 409 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + + + + + + + + Sbjct: 410 QTVFKIFNFDNFEAQISLRD-------------PKDREKYIGADEVWEESEQAIKEACAE 456 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I A Y D + D++ ++ ++ F Sbjct: 457 KGLDAKIAYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLPQRF--------KLE 505 Query: 302 FKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D K V + G++ AV+ G +W + I + Sbjct: 506 YTDEDNVKKTPVMIHRAPFGSLERFTAVLIEHTAGHFPLW------LTPDQVAILPISEK 559 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ G DD E+IG + +L+ P VIVG K +D V ++ Sbjct: 560 YNDYAKKVSKYFDAQGVRATIDDRNEKIGRKIRDNELMRVPYMVIVGEKEAADGLVSMRK 619 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 + G + M++EE + + Sbjct: 620 QGGGEQATMTMEEFAKRINGEVAE 643 >gi|117925064|ref|YP_865681.1| prolyl-tRNA synthetase [Magnetococcus sp. MC-1] gi|152112926|sp|A0L8I2|SYP_MAGSM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|117608820|gb|ABK44275.1| prolyl-tRNA synthetase [Magnetococcus sp. MC-1] Length = 576 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 123/238 (51%), Positives = 163/238 (68%), Gaps = 1/238 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +A++ SHKLMLR G+I Q GIY+WLP+G K L V I+R+E Sbjct: 1 MRFSQTLIPTLKEEPSEAQVISHKLMLRAGLIRQLGAGIYTWLPMGLKVLRKVETIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P++Q A+LW ESGR+ YGKE+LR+ DR++++ YGPTHEEV++D+ R Sbjct: 61 MDRAGAQEVLMPSIQPAELWEESGRWKMYGKELLRITDRHNRSFCYGPTHEEVISDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFG+MR REFLMKDAYSFD+ SY MF + Sbjct: 121 EIHSYKQLPANFYQIQTKFRDEVRPRFGIMRGREFLMKDAYSFDIDEAALDKSYRLMFEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 Y +IF+RL LK P+ A++G IGG SHEF VLA +GE + + E Sbjct: 181 YNKIFNRLDLKFRPVEADTGAIGGASSHEFHVLAQSGEDVIASCTHCQ-YAANLEKAF 237 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 70/195 (35%), Positives = 106/195 (54%), Gaps = 3/195 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK---RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 P D+ N + D P +RGIEVGH+F G KYS M DGK+ Sbjct: 380 PKPEFVDLRNVEEGDGCPRCGPGSMELSRGIEVGHVFKLGYKYSEAMGVKVLDEDGKEKP 439 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + MG YGIG R+VAA IE +HD GIIWP ++APF++ ++ + ++ + E+I A+ Sbjct: 440 LIMGCYGIGVSRIVAAAIEQNHDENGIIWPLAIAPFEVEVVVMNPNESDAMEKAEEITAQ 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L +V DD E+ GS+F ADLLG P +V+VG + + E+K+R +G+ E + + Sbjct: 500 LQAGQLEVLLDDRDERAGSKFKDADLLGAPYRVLVGGRAFKEGVCEVKNRRSGVVEKIPV 559 Query: 432 EEVINYASHRFSNNR 446 E V+ + + Sbjct: 560 ESVVETLLQWLAQEK 574 >gi|225852573|ref|YP_002732806.1| threonyl-tRNA synthetase [Brucella melitensis ATCC 23457] gi|256263936|ref|ZP_05466468.1| threonyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9] gi|254783511|sp|C0RJ44|SYT_BRUMB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|225640938|gb|ACO00852.1| threonyl-tRNA synthetase [Brucella melitensis ATCC 23457] gi|263094080|gb|EEZ18002.1| threonyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9] Length = 658 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 152/445 (34%), Gaps = 40/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD ++ L + G+ W G K N+ + +R + Sbjct: 233 QAYLHMLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 291 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F + + Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLQIN 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G + I ++ + P S E A++ V E Sbjct: 411 -DHILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVL------------EQI 457 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I+ A Y + L D++ + ++ FG Sbjct: 458 RQQSNNIKTGILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------ 508 Query: 298 MSATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G K V + G+M ++ + G +W V ++ Sbjct: 509 --AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATIT---- 562 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + ++ A+L G V D E+I + L P+ ++ G + + V Sbjct: 563 --SDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHSLQKVPVILVCGKREAEEKTV 620 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + +E M+L+E I Sbjct: 621 NMRRLGSRDQESMTLDEAIARLCEE 645 >gi|157376262|ref|YP_001474862.1| prolyl-tRNA synthetase [Shewanella sediminis HAW-EB3] gi|157318636|gb|ABV37734.1| prolyl-tRNA synthetase [Shewanella sediminis HAW-EB3] Length = 584 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 124/240 (51%), Positives = 164/240 (68%), Gaps = 1/240 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P DAE+ SH+LMLR GMI +++ G+YSWLP G + L V AI+REE Sbjct: 16 MRVSKYLLSTQKETPADAEVISHQLMLRAGMIRRNASGLYSWLPTGLRVLRKVEAIVREE 75 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ G++E+ +P +Q ADLWVE+GR++ +G E+LR DR+++ + GPTHEEV+TDI R Sbjct: 76 MNKAGSVEILMPMVQPADLWVETGRFEKFGPELLRFQDRHNRDFVLGPTHEEVITDIVRK 135 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ KFRDE+RPRFGVMRSREFLMKDAYSF L E +Y MF + Sbjct: 136 EVNSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHLDQETMDETYETMFQA 195 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y I RLGL P+ A++G IGG +SHEF VLA++GE + D+ E + Sbjct: 196 YNNILTRLGLAFRPVMADTGSIGGSMSHEFHVLANSGEDLIAY-STESDYAANIEKAEAP 254 Score = 165 bits (417), Expect = 2e-38, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 3/203 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPM 298 D I + P A D+ N ++ P + A RGIEVGHIF G YS M Sbjct: 380 DDKHYFGINWERDLPEAEAFDLRNIIEGEASPCGQGTIALLRGIEVGHIFQLGKNYSEAM 439 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 +A +GK + MG YG+G R+VAA IE +HD +GI WPD++APF++ ++ + Sbjct: 440 NANVLDHNGKAQTLLMGCYGVGVSRMVAAAIEQNHDDRGITWPDAIAPFRVGILPMNMHK 499 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 +D EK+Y + G +V +DD E+ G FA +L+G P V++G + + + E Sbjct: 500 SHRVKDMAEKLYQDMQDAGFEVLFDDRKERAGVMFADMELVGLPHVVVIGDRNIDNGVFE 559 Query: 418 IKHRLTGIREDMSLEEVINYASH 440 K+R TG ++++ +++I++ Sbjct: 560 YKNRRTGEKQEIPFDQIIDFLKS 582 >gi|88705599|ref|ZP_01103309.1| prolyl-tRNA synthetase [Congregibacter litoralis KT71] gi|88700112|gb|EAQ97221.1| prolyl-tRNA synthetase [Congregibacter litoralis KT71] Length = 571 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 121/241 (50%), Positives = 164/241 (68%), Gaps = 1/241 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ + +E P DAEI SH+LMLR G+I + S G+Y+W+P+G + L V ++REE Sbjct: 1 MRSSEFLITTHKETPADAEIISHRLMLRAGLIRKLSSGLYTWMPMGLRVLRKVERVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + +GA+E+++P +Q A+LW ESGR++ YG E+LR+ DR+ + GPTHEEV+TDI R+ Sbjct: 61 MDASGALELAMPMVQPAELWEESGRWEQYGPELLRIQDRHQRDFCLGPTHEEVITDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K RDE+RPRFGVMR+REFLMKDAYSF + +Y M + Sbjct: 121 EISSYKQLPLNLYQIQNKVRDEIRPRFGVMRAREFLMKDAYSFHADATSLEATYGVMHGA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A+SG IGG+ SHEF VLAD+GE + S D+ E + Sbjct: 181 YTRIFERLGLDFRPVMADSGSIGGNTSHEFHVLADSGEDAIAFSD-GSDYAANIERAETV 239 Query: 241 D 241 D Sbjct: 240 D 240 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 63/188 (33%), Positives = 110/188 (58%), Gaps = 3/188 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K RGIEVGHIF GTKYS M+A G++ + MG Y Sbjct: 382 ADLRNVVAGDPSPDGKGQLQIRRGIEVGHIFQLGTKYSEAMNARVLDETGRNVTLSMGCY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKVG 376 GIG R+VAA IE +HD +GIIWP ++APF+++++ + +A E ++ +G Sbjct: 442 GIGVSRIVAAAIEQNHDDRGIIWPSAMAPFQLAIVPLNMHKSAAVAEAAETLHQECLALG 501 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G +FA +LLG P ++++G + +++ ++E + R + ++L E ++ Sbjct: 502 IEVLMDDRNERPGVKFADMELLGIPHRIVIGDRSLAEGEIEYQGRRDADSQRVALTEAMS 561 Query: 437 YASHRFSN 444 + + + ++ Sbjct: 562 FITAQLTS 569 >gi|311103966|ref|YP_003976819.1| prolyl-tRNA synthetase [Achromobacter xylosoxidans A8] gi|310758655|gb|ADP14104.1| prolyl-tRNA synthetase [Achromobacter xylosoxidans A8] Length = 575 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 124/235 (52%), Positives = 163/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y + L+E P +AE+ASH+LM R GMI + + GIY+++PLG K + V AI+REE Sbjct: 1 MRASNYHINTLKEAPSEAEVASHQLMTRAGMIRKLAGGIYTYMPLGLKVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q A+LW ESGR++ YG E+LR+ DR+ + + PT EEV+TDI R+ Sbjct: 61 MNAAGAIELLMPVVQPAELWQESGRWEQYGAELLRIKDRHQRDFVLQPTSEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD G++ SY+ M+ + Sbjct: 121 EIHSYRQLPVNFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDEAGAQASYDTMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y+RIF RLGL + A++G IGG SHEF V+ADTGE + + D D+ E Sbjct: 181 YMRIFGRLGLGFRAVAADTGSIGGTRSHEFQVIADTGEDLLVYNADT-DYAANIE 234 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 69/189 (36%), Positives = 101/189 (53%), Gaps = 3/189 (1%) Query: 259 TSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGH+FY G KYS + ATF GK ++MG Sbjct: 386 VADLRNVVAGDPSPDGKGTLSIQRGIEVGHVFYLGKKYSEALKATFLDETGKPAVLEMGC 445 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+V A IE +HD +GIIWP ++APF++ + + + RD +K+Y L Sbjct: 446 YGIGVTRIVGAAIEQNHDARGIIWPRAIAPFEVVICPVGWGKSETVRDTAQKLYESLLAR 505 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD + G FA +L+G PL+V VG + ++D VE++ R + +E + Sbjct: 506 GVDVILDDRDARPGVMFAEWELIGAPLRVTVGERGLNDGVVELQARRETEAAKIPVESAL 565 Query: 436 NYASHRFSN 444 + Sbjct: 566 EAVLTKLDT 574 >gi|238759923|ref|ZP_04621077.1| Prolyl-tRNA synthetase [Yersinia aldovae ATCC 35236] gi|238701830|gb|EEP94393.1| Prolyl-tRNA synthetase [Yersinia aldovae ATCC 35236] Length = 572 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 122/235 (51%), Positives = 161/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L +E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTQKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP F+QIQ KFRDE+RPRFGVMR+REFLMKDAYSF T E + +Y+ M+ + Sbjct: 121 EINSYKQLPLNFFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+ L + A++G IGG SHEF VLA++GE + D+ E Sbjct: 181 YSKIFARMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVF-STESDYAANIE 234 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 115/206 (55%), Gaps = 3/206 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D I + P +D+ N D P+ K RGIEVGHIF GTKYS M Sbjct: 366 DDKHYFGINWERDLPLPQVADLRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGTKYSEAM 425 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 AT +G DG++ + MG YGIG RVVAA IE ++D +GIIWPD++APF+++++ + H Sbjct: 426 KATVQGEDGRNQVMTMGCYGIGVSRVVAAAIEQNYDERGIIWPDAIAPFQVAILPMNMHK 485 Query: 359 Q-VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 ++ E++YA L G DV DD E+ G FA +L+G P +++G + + +VE Sbjct: 486 SFRVKELAEELYATLRSHGIDVILDDRKERPGVMFADMELIGVPHNIVIGDRNLDSEEVE 545 Query: 418 IKHRLTGIREDMSLEEVINYASHRFS 443 K+R G ++ + E+I + + Sbjct: 546 YKNRRIGEKQMIKTSEIIEFLLSQIK 571 >gi|118602380|ref|YP_903595.1| prolyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|152016598|sp|A1AW17|SYP_RUTMC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|118567319|gb|ABL02124.1| prolyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 559 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 117/239 (48%), Positives = 162/239 (67%), Gaps = 1/239 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ +K +P +E P DA+I SH+LM+R G+I + + G+YS+LP+G + L V IIR+E Sbjct: 1 MKTTKLLIPTQKEVPNDAQIISHQLMIRAGLISKLASGLYSYLPMGVRVLHKVENIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GA E+ +P +Q A+LW SGR+D YG E+LR DR+ + GPTHEEV+T + Sbjct: 61 MNKSGAQEVFMPVVQPAELWKTSGRWDKYGTELLRFTDRHQREFCLGPTHEEVITHLAAQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF L + +Y+ M+ + Sbjct: 121 YLRSYKQLPMNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHLDQYSLQQTYDVMYQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y IF RL L + A+SG IGGD SHEF VLA++GE + C D ++ E F Sbjct: 181 YCNIFDRLSLDYHAVLADSGSIGGDASHEFHVLAESGEDTI-CFSDESNYAANIEKVSF 238 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 99/194 (51%), Gaps = 3/194 (1%) Query: 252 WTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 W +D+ + D P+ K + RGIEVGHIF GTKYS M G GK Sbjct: 366 WQGIEFVDADLRSAVEGDYSPDGKGKLIIKRGIEVGHIFQLGTKYSSAMKVNVIGESGKA 425 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKI 368 MG YGIG R++AA IE ++D KGII+P ++APF++ ++ I + +K+ Sbjct: 426 ITTTMGCYGIGVTRIIAASIEQNYDDKGIIFPQAIAPFQVVIVPINYNKSTRVKALSDKL 485 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 Y + G +V DD E+ G FA ++LLG P ++++ + VE K R + Sbjct: 486 YQQFIGAGIEVLLDDRKERAGIMFADSELLGIPHRMVISDTHADNGNVEYKARDKIDKMQ 545 Query: 429 MSLEEVINYASHRF 442 M ++ +++ + Sbjct: 546 MKFDDALSFIQFKL 559 >gi|67920215|ref|ZP_00513735.1| Threonyl-tRNA synthetase, class IIa [Crocosphaera watsonii WH 8501] gi|67857699|gb|EAM52938.1| Threonyl-tRNA synthetase, class IIa [Crocosphaera watsonii WH 8501] Length = 642 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 82/442 (18%), Positives = 155/442 (35%), Gaps = 38/442 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y + RD +L L + I + G+ W P G K + R+ Sbjct: 234 YLKQREEAKRRDHRKLGKELKLFS--IQENAGGGLVFWHPRGAKMRYVIEDYWRKAHLDG 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + + DLW SG +D Y + M ++A P + +++ + S Sbjct: 292 GYELLYTPHVANLDLWKTSGHFDFYRENMFDSMKIEEQAYQIKPMNCPFHVLTYKNELHS 351 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR P + ++ +R E G+MR R F DA+ F L + + + + Sbjct: 352 YREFPLRWAELGTVYRYERSGVLHGLMRVRGFTQDDAHVFCLPTQIASE-ILGVLNLTEK 410 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I G K + + P + E + + + Sbjct: 411 ILSDFGFKDYEVNLSTRPDKSVGTDE-----------------GWELATQALVEALNGKG 453 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y D+ K+ D++ + S ++ F ++ + A Sbjct: 454 WDYIEDKGGGAFYGPKIDI---KIKDAIGRTWQCSTIQVD----FNLPERFDMEYVAV-- 504 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + G++ ++ + +P +AP ++ L+ + + + Sbjct: 505 -DGSRQRPIMIHRAIFGSLERFYGILI---ENYAGDFPLWLAPIQLRLLPV---SEAQIE 557 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E + A L + G V D GE++G Q A+L P+ IVG K V + I+ R Sbjct: 558 YGETVVATLKQAGYRVEIDCTGERLGKQIRNAELEKIPVVAIVGKKEVETQTLSIRTRQQ 617 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G M+L E+ +N Sbjct: 618 GDIGTMTLTELKESFKSAITNK 639 >gi|312623109|ref|YP_004024722.1| prolyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002] gi|312203576|gb|ADQ46903.1| prolyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002] Length = 572 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 122/265 (46%), Positives = 163/265 (61%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F+P L+E P DAEI SHKLMLR+G + Q S GIY +LPLG + L + I+REE Sbjct: 1 MKVSELFMPTLKETPSDAEIESHKLMLRSGFMRQLSSGIYVYLPLGYRVLRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +++GA E+ + L +LW ESGR+ +G EM R+ DRN++ GPTHEE T I R+ Sbjct: 61 MDKSGAQEVHMSALMPKELWEESGRWAVFGPEMFRVKDRNEREYCLGPTHEEAFTYIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR+LP YQIQ KFRDE RPRFGVMR REF MKDAYSFD+ +G SY KM+ + Sbjct: 121 EISSYRDLPKILYQIQTKFRDERRPRFGVMRCREFTMKDAYSFDVDEKGLDISYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+RIF R GL + A++G +GG SHEF+V + GE ++ K + D Sbjct: 181 YVRIFKRCGLDVKIVEADTGAMGGASSHEFMVPSSVGEAEIAYCKACGYAANLEKAECLD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 + I N +++ Y E Sbjct: 241 EPIENNEELKEKQEVYTPNVRTIEE 265 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 68/194 (35%), Positives = 103/194 (53%), Gaps = 4/194 (2%) Query: 256 YAATSDVHNEKLFDSLPEN---KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 +D+ N D P+ K RGIEVGHIF GTKY+ + + G+ + Sbjct: 375 VTKFADLRNITQDDLCPKCCSQKVTIERGIEVGHIFKLGTKYTQAFNCVYTDEKGEKKLM 434 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R AA+IE HD GIIWP +VAP+++ ++ + D+ +IY L Sbjct: 435 IMGCYGIGINRTAAAIIEQMHDEDGIIWPITVAPYEVIIVPVNVKDENQNRIAFEIYENL 494 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 + G +V DD E+ G +F ADL+G P +V VG K +S+ K+EI++R T ++ +E Sbjct: 495 QRNGVEVLIDDRDERAGVKFKDADLIGIPFRVTVGKK-ISEGKLEIRNRRTKESFEVEIE 553 Query: 433 EVINYASHRFSNNR 446 + I + + Sbjct: 554 KAIEVVINLIREEK 567 >gi|95930704|ref|ZP_01313437.1| prolyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684] gi|95133184|gb|EAT14850.1| prolyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684] Length = 571 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 125/239 (52%), Positives = 166/239 (69%), Gaps = 1/239 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y LP L+ENP DAEI SH+LM+R GMI + + GIY++LPLG +++ V I+REE Sbjct: 1 MRLTEYLLPTLKENPADAEIVSHQLMMRAGMIRKVAAGIYTYLPLGLRSIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P + A LW ESGR++ YGKE+LR+ DR D GPTHEEV+TD+ R Sbjct: 61 MDRAGAMELLMPMVVPAGLWEESGRWEQYGKELLRIRDRKDTEFCLGPTHEEVITDVVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFDL G+ +Y KM+ + Sbjct: 121 TVRSYRQLPLNLYQIQGKFRDEIRPRFGLMRGREFIMKDAYSFDLEDAGADTAYEKMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y RIF R GLK + A++G IGG SHEF+VLA++GE + D+ E Sbjct: 181 YQRIFKRCGLKFRAVEADTGNIGGSSSHEFMVLAESGEDAIVSCDQC-DYAANVEKAQM 238 Score = 166 bits (419), Expect = 9e-39, Method: Composition-based stats. Identities = 68/190 (35%), Positives = 106/190 (55%), Gaps = 2/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 A +D+ + D P RGIEVGH+F GTKYS + AT A+GK+ + Sbjct: 377 VEAYADLRQAQAGDGCPRCDGTLQMWRGIEVGHVFKLGTKYSEALGATVLNAEGKEAPLV 436 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA IE +HD +G+I+P +APF++ + + D+ A ++Y +L Sbjct: 437 MGCYGIGIGRTVAAAIEQNHDDQGVIFPMPIAPFQVIITLLNPKDEQVMQAGSELYQQLM 496 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G +V DD E+ GS+F A+L+G P++V VG++ + + E++ RL G R M + E Sbjct: 497 DAGVEVLLDDRDERPGSKFKDAELIGIPIRVTVGNRALKEGAFEVQKRLEGERMMMPVAE 556 Query: 434 VINYASHRFS 443 +++ Sbjct: 557 TLSWLVDEVK 566 >gi|329113775|ref|ZP_08242547.1| Threonyl-tRNA synthetase [Acetobacter pomorum DM001] gi|326696901|gb|EGE48570.1| Threonyl-tRNA synthetase [Acetobacter pomorum DM001] Length = 640 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 79/439 (17%), Positives = 143/439 (32%), Gaps = 40/439 (9%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + RD ++ L + G W P G + A +R Q +E Sbjct: 233 RQEEAARRDHRRLGREMDLF--HFQPEAPGAVFWHPNGWTLFQTLLAYLRARQQAENYVE 290 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 ++ P + LW SG ++ +G+ M + + P + +FR +KSYR+L Sbjct: 291 INTPDIMDLSLWQASGHWEKFGENMFT-TETEGRTYALKPMNCPGGVQVFRHGLKSYRDL 349 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P + R E G+MR R F DA+ F TPE + ++ L I+ Sbjct: 350 PLRMAEFGKVHRFEPSGALHGLMRVRAFTQDDAHIFC-TPEQMEAETQRICHLVLSIYKD 408 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 G ++ ++ P S E D + + + Sbjct: 409 FGFNNVRIKFSDRPEKRVGSDE-----------------IWDRSEDALRRGVEASGLSYT 451 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 A Y + L D++ + + +++ A + GADG Sbjct: 452 RNPGEGAFYGPKLEF---VLRDAIGRDWQCGTVQVDLNLPQRLD--------AHYVGADG 500 Query: 308 KDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 H + G++ ++ H G W V ++ + + Sbjct: 501 DKHPPVMLHRALFGSLERFIGILLEHHAGHLPFWLAPVQVVVATIT------AAADEYAD 554 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + L + G V D E+I + L P+ +IVG K V I+ Sbjct: 555 DLIKALRQRGVRVVPDLRNEKIAYKIREHSLAKVPVLLIVGKKEAQAGTVSIREYGNPDA 614 Query: 427 EDMSLEEVINYASHRFSNN 445 +++E IN + + Sbjct: 615 PTIAMETAINLLADASRSR 633 >gi|326409092|gb|ADZ66157.1| threonyl-tRNA synthetase [Brucella melitensis M28] Length = 660 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 152/445 (34%), Gaps = 40/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD ++ L + G+ W G K N+ + +R + Sbjct: 235 QAYLHMLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 292 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 293 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 352 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F + + Sbjct: 353 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLQIN 412 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G + I ++ + P S E A++ V E Sbjct: 413 -DHILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVL------------EQI 459 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I+ A Y + L D++ + ++ FG Sbjct: 460 RQQSNNIKTGILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------ 510 Query: 298 MSATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G K V + G+M ++ + G +W V ++ Sbjct: 511 --AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATIT---- 564 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + ++ A+L G V D E+I + L P+ ++ G + + V Sbjct: 565 --SDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHSLQKVPVILVCGKREAEEKTV 622 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + +E M+L+E I Sbjct: 623 NMRRLGSRDQESMTLDEAIARLCEE 647 >gi|157962683|ref|YP_001502717.1| prolyl-tRNA synthetase [Shewanella pealeana ATCC 700345] gi|189083515|sp|A8H6J5|SYP_SHEPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157847683|gb|ABV88182.1| prolyl-tRNA synthetase [Shewanella pealeana ATCC 700345] Length = 570 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 122/240 (50%), Positives = 164/240 (68%), Gaps = 1/240 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YSWLP G + L + AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVVSHQLMLRAGMIRRNASGLYSWLPTGLRVLRKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ G++E+ +P +Q ADLWVE+GR++ +G E+LR DR+++ + GPTHEEV+TDI R Sbjct: 61 MNKAGSVEILMPMVQPADLWVETGRFEKFGPELLRFQDRHNRDFVLGPTHEEVITDIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E +Y MF + Sbjct: 121 EVNSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHIDQETMDETYEAMFQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y I RLGL P+ A++G IGG +SHEF VLA++GE + D+ E + Sbjct: 181 YSNILTRLGLAFRPVMADTGSIGGSMSHEFHVLANSGEDLIAY-STESDYAANIEKCEAP 239 Score = 176 bits (447), Expect = 5e-42, Method: Composition-based stats. Identities = 68/190 (35%), Positives = 109/190 (57%), Gaps = 3/190 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A D+ N + P K A RGIEVGHIF GT YS M+A +GK + Sbjct: 379 PEAPAFDLRNIIEGEPSPCGKGTIALLRGIEVGHIFQLGTNYSEAMNANVLDQNGKSQTL 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYAR 371 MG YG+G R+VAA IE ++D +GIIWP+++APF + ++ + +D E++Y Sbjct: 439 LMGCYGVGVSRMVAAAIEQNNDDRGIIWPEAIAPFTVGILPMNMHKSHRVKDIAEQLYQD 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G +V +DD E+ G FA +L+G P V++G + + + E K+R TG ++D+ L Sbjct: 499 LNDAGIEVMFDDRKERPGVMFADMELIGIPHVVVIGDRNIDNGMFEYKNRRTGEKQDIPL 558 Query: 432 EEVINYASHR 441 ++++ + + Sbjct: 559 DQIVEFLKAQ 568 >gi|56551661|ref|YP_162500.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4] gi|260752754|ref|YP_003225647.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|73919847|sp|Q5NPH1|SYT_ZYMMO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56543235|gb|AAV89389.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4] gi|258552117|gb|ACV75063.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 659 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 82/456 (17%), Positives = 145/456 (31%), Gaps = 52/456 (11%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K L L+E RD ++ L + Q ++G W P G + A +R Sbjct: 233 KQLKAHLERLEEAQKRDHRRLGQEMDLF--HLQQEAQGSVFWHPNGYTIWLQLEAYLRRR 290 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADR-------------NDKAMIYG 107 E+ P L A LW SG + + + M + D M Sbjct: 291 MKNANYKEVKTPQLMDAALWEASGHWGKFRENMFVVPDEIPSTDPDKPVLSGKGNLMALK 350 Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLT 166 P + IF+ I+SYR LP + R+E G+MR R+ DA+ F Sbjct: 351 PMNCPAHIQIFKQGIRSYRELPLRMLEFGCCHRNEAHGALHGLMRVRQLTQDDAHIFCTA 410 Query: 167 PEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 + + I+ LG S ++ P E A+ G Sbjct: 411 EQIVTET-KDFVNLLDSIYRDLGFTSYAVKLSLRPELRAGDDELWDNAENGLRSALEQVG 469 Query: 227 FMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGH 286 D+ + A Y + H L D++ + ++ Sbjct: 470 ITDYEE----------------LPGEGAFYGPKLEFH---LTDAIGRTWQCGTLQLDYVL 510 Query: 287 IFYFGTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 + A++ DG + IG ++ H G+ +W V Sbjct: 511 P--------ERLDASYVAEDGSRKRPVMLHRAIIGTFERFIGILIEHHAGRFPLWMAPVQ 562 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405 +++ E + ++ G V D E+I + L P ++ Sbjct: 563 AVVATIV------SEADSFAESVVEKMKAAGLRVVSDIRNEKINYKIREHSLTKVPNILV 616 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 VG + + KV I+ + + +S++E I Sbjct: 617 VGKREAEEGKVAIRKLGSRDQIILSVDEAIALLLEE 652 >gi|71279026|ref|YP_269920.1| prolyl-tRNA synthetase [Colwellia psychrerythraea 34H] gi|114152184|sp|Q47Z50|SYP_COLP3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|71144766|gb|AAZ25239.1| prolyl-tRNA synthetase [Colwellia psychrerythraea 34H] Length = 569 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 121/237 (51%), Positives = 157/237 (66%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P +AE+ SH+LMLR G++ + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPANAEVISHQLMLRAGLVRNLASGLYTWLPTGLRVLKKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G E+ +P +Q ADLW ESGR D YG E+LR+ DR+ + + GPTHEEV+T + + Sbjct: 61 MQRAGGNEILMPMVQPADLWQESGRLDDYGPELLRINDRHKRPFVLGPTHEEVVTKLVAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +QIQ KFRDE+RPRFGVMR REFLMKDAYSF L E + +Y MF + Sbjct: 121 ELSSYKQLPLNVFQIQSKFRDEIRPRFGVMRGREFLMKDAYSFHLEDECLEKTYQIMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF RL L P+ A++G IGG+ SHEF VLAD+GE + S DF E Sbjct: 181 YCRIFERLELNFRPVLADTGSIGGEKSHEFHVLADSGEDDIAFSD-ASDFAANIEKA 236 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 112/203 (55%), Gaps = 3/203 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLP 297 +D L + Q + D+ N D + RGIEVGHIF G KY+ Sbjct: 367 EDDAHLTGVNWQRDCNEISVHDIRNVVAGDPSPCGQGNIEIKRGIEVGHIFQLGRKYAEA 426 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA- 356 M+ GK+ + MG YGIG R+VAA IE +HD GI WP ++APF+++++ + Sbjct: 427 MNCAVLNEGGKNQTLTMGCYGIGVSRIVAAAIEQNHDKYGIKWPKAIAPFQVAIVPMNMA 486 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 ++ E +Y L++ G +V +DD E+ G FA +L+G PL +I+G + + ++ Sbjct: 487 KSARVKETAEALYESLNQAGIEVLFDDRKERPGVMFADHELMGTPLLLIIGERNLDAQQI 546 Query: 417 EIKHRLTGIREDMSLEEVINYAS 439 E+K+R+TG + ++++EV++ + Sbjct: 547 ELKNRITGEKSLIAIDEVMSLFN 569 >gi|256113621|ref|ZP_05454441.1| threonyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] gi|265994988|ref|ZP_06107545.1| threonyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] gi|262766101|gb|EEZ11890.1| threonyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] Length = 658 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 151/445 (33%), Gaps = 40/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD ++ L + G+ W G K N+ + +R + Sbjct: 233 QAYLHMLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D P + IF Sbjct: 291 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDHVFALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F + + Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLQIN 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G + I ++ + P S E A++ V E Sbjct: 411 -DLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVL------------EQI 457 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I+ A Y + L D++ + ++ FG Sbjct: 458 RQQSNNIKTGILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------ 508 Query: 298 MSATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G K V + G+M ++ + G +W V ++ Sbjct: 509 --AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATIT---- 562 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + ++ A+L G V D E+I + L P+ ++ G + + V Sbjct: 563 --SDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHSLQKVPVILVCGKREAEEKTV 620 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + +E M+L+E I Sbjct: 621 NMRRLGSRDQESMTLDEAIARLCEE 645 >gi|218288925|ref|ZP_03493176.1| threonyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1] gi|218241014|gb|EED08191.1| threonyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1] Length = 648 Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats. Identities = 71/434 (16%), Positives = 157/434 (36%), Gaps = 34/434 (7%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L + T + + +G+ WLP G K + I + + G + Sbjct: 239 EARERDHRRLGKELEIFT-LSPEVGQGLPLWLPNGAKIRRIIERYIVDLEESLGYQHVYT 297 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P L + +L+ SG ++ Y +M +++ ++ P + +++ + SYR LP Sbjct: 298 PHLANVELYKISGHWEHYKDDMYPPMKIDNEELVLRPMNCPHHMMVYKHRLHSYRELPIR 357 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 ++ R E+ G+ R R + DA+ F P+ + + + R++ G+ Sbjct: 358 IAELGTMHRYEMSGALAGLQRVRAMTLNDAHIFCR-PDQIEQEFTGVVRLIQRVYKDFGI 416 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 R + + + + + D+ E Sbjct: 417 DDYYHRLS-------------YRDPKNTEKYVQNDEMWELAQSTLRKVMLDLGLEFVEAE 463 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y DV ++ +L +++ +S ++ F+ ++ + + G DG+ H Sbjct: 464 GEAAFYGPKLDV---QVRTALGKDETLSTIQLD----FHLPNRF----NLEYVGEDGERH 512 Query: 311 YVQMGSYG-IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + G +G M A + + G W + + + + E++ Sbjct: 513 RPVVIHRGVVGTMERFVAFLIEQYKGAFPTW------LAPTQVVVASVADEFAGYAEEVA 566 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 A+L ++G D +IG + A P ++VG++ + V ++ G M Sbjct: 567 AKLRELGIRAEADVSDNKIGYKIRQAQTHKIPYTLVVGAREREEGTVSVRKYHAGDLGVM 626 Query: 430 SLEEVINYASHRFS 443 L++ + Sbjct: 627 PLDQFVRQIQDEIE 640 >gi|282877699|ref|ZP_06286514.1| threonine--tRNA ligase [Prevotella buccalis ATCC 35310] gi|281300271|gb|EFA92625.1| threonine--tRNA ligase [Prevotella buccalis ATCC 35310] Length = 654 Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats. Identities = 80/445 (17%), Positives = 154/445 (34%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y L + + RD ++ L + KG+ WLP G + + ++R+ Q R Sbjct: 232 EYLLMLEEAKKRDHRKIGKEMELFM-FSDRVGKGMPIWLPKGTELRLRLQEMLRKIQKRF 290 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P + S +L+V SG Y YGK+ + +D+ + P + ++F Sbjct: 291 GYQEVITPHIGSKNLYVTSGHYAHYGKDSFQPIHTPEDDEEYMLKPMNCPHHCEVFACKP 350 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + +R E G+ R R F DA+ F + M Sbjct: 351 RSYKDLPLRIAEFGTVYRYEKSGELHGLTRVRSFTQDDAHIFCRPDQVKNEFLRVM---- 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++A D I L D + + + D + + Sbjct: 407 -----------DIIQAVFTIFNFDNFEAQISLRDPNDKEKYIGSDEVWAESEQAIIEACK 455 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L++ V A Y D + D++ ++ ++ F Sbjct: 456 EKGLDAKVAYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLPQRF--------KL 504 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D + G++ AV+ G +W + I + Sbjct: 505 EYTAEDNTKQTPVMVHRAPFGSLERFTAVLIEHTAGHFPLW------LTPEQVAILPISE 558 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +++ ++ DD E+IG + +L P VIVG K ++ V ++ Sbjct: 559 KFNGYAQQVVKYFTEQDIRATIDDRNEKIGRKIRDNELKRVPYMVIVGEKEAAEGLVSMR 618 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M +E+ ++ S Sbjct: 619 KQGGGEQATMKMEDFAARINNEVSE 643 >gi|265751997|ref|ZP_06087790.1| threonyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA] gi|263236789|gb|EEZ22259.1| threonyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA] Length = 646 Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 156/445 (35%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L KG+ WLP G + +R Q R Sbjct: 230 EYLVMLEEAKKRDHRKIGKEMDLFM-FTDMVGKGLPMWLPKGTALRIRLQDFLRRIQARY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + +L++ SG Y YGK+ + + P + I+++ Sbjct: 289 DYQEVMCPPIGNKNLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F P+ K + ++ Sbjct: 349 RSYKDLPLRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHLFCR-PDQVKEEFLRVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + +++ + D + + D + + Sbjct: 408 NIVFKSMNFENVEAQISLR--------------DKVNREKYIGSDENWEKAEQAIIEACE 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + VE A Y D + D++ ++ ++ Sbjct: 454 EKGLTAKVEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFQL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G+D + H + G+M AV+ GK +W + I + Sbjct: 503 EYMGSDNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LTPDQVAILPISE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L K DD E+IG + ++ P +IVG K + +V ++ Sbjct: 557 KFNEYAEKVKAELRKYDVRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVAVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M +EE + SN Sbjct: 617 KQGEGDKGTMKIEEFGKNLAEEVSN 641 >gi|261855252|ref|YP_003262535.1| prolyl-tRNA synthetase [Halothiobacillus neapolitanus c2] gi|261835721|gb|ACX95488.1| prolyl-tRNA synthetase [Halothiobacillus neapolitanus c2] Length = 568 Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats. Identities = 121/235 (51%), Positives = 163/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L L+E P +AEI SH+LMLR GMI + + G+Y+W PLG + L V A++REE Sbjct: 1 MRSSQFPLNTLKETPTEAEIISHQLMLRAGMIRRLASGLYTWSPLGLRVLRKVEAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA+E+ +P +Q A+LW ESGR+ YG E+LR+ DR+D+ GPTHEEV++D R Sbjct: 61 MEGIGALELLMPAIQPAELWQESGRWQKYGPELLRVKDRHDREFCVGPTHEEVISDYARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP +YQ+Q KFRDE+RPRFGVMR+REF+MKDAYSF E + +Y M+ + Sbjct: 121 ELKSYRQLPICYYQVQTKFRDEIRPRFGVMRAREFIMKDAYSFHADVESLRVTYQAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGLK + A++G IGG SHEF VLAD+GE + + + D+ E Sbjct: 181 YTRIFTRLGLKFRAVEADTGSIGGKGSHEFHVLADSGEDAIAYAVNG-DYAANVE 234 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 3/207 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLP 297 +D + + P T+D+ N D P+ K ARGIEVGH+F GT YS Sbjct: 362 EDGWHITGVNWGRDLPEPETADLRNAVEGDPAPDGQDKLAIARGIEVGHVFQLGTTYSEK 421 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 M F GK MG YGIG R+VAA IE +HD GI+WP +APF+++++ I H Sbjct: 422 MHCEFLDEHGKPATAIMGCYGIGVSRIVAAAIEQNHDDNGIVWPVPLAPFEVAIVPINGH 481 Query: 358 DQ-VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + E++ A L+ G +V DD G + G FA +L+G PL+++V + ++ + Sbjct: 482 RAPAVQAEAERLEAELTAQGFNVLLDDRGLRPGVAFADMELIGIPLRIVVSERGLAAGEY 541 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E + R + + ++++ + Sbjct: 542 ETRLRWESENKSIIADQLLAWIGQNLK 568 >gi|170695316|ref|ZP_02886462.1| prolyl-tRNA synthetase [Burkholderia graminis C4D1M] gi|170139716|gb|EDT07898.1| prolyl-tRNA synthetase [Burkholderia graminis C4D1M] Length = 578 Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats. Identities = 136/288 (47%), Positives = 180/288 (62%), Gaps = 5/288 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPIGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEKYGPELLRFKDRKQSDFVIGPTHEEVVTDIARG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD G + SY KM+ + Sbjct: 121 QIKSYRQLPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDAAGLRESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD-- 238 Y+RIF RLGL + A++G IGG SHEF V+A+TGE + DF E + Sbjct: 181 YVRIFTRLGLDFRAVAADNGSIGGSGSHEFHVIAETGEDAIAYCPT-SDFAANVEAAEAL 239 Query: 239 --FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 + + +++ P A + E L L + E Sbjct: 240 PLYAQRAAPAEELKKTPTPGKAKCEAVAEYLNIPLERTIKSIVLATEN 287 Score = 175 bits (443), Expect = 2e-41, Method: Composition-based stats. Identities = 69/192 (35%), Positives = 108/192 (56%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ + K D P+ K V RGIEVGH+F GTKYS M+AT +GK + Sbjct: 382 PEPVVADIRDVKKGDPSPDGKGVLDICRGIEVGHVFQLGTKYSEAMNATCLDENGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 +MG YG+G R++ A IE + D KGIIWP+S+APF++ L + + R+ +K+YA Sbjct: 442 EMGCYGVGITRILGAAIEQNFDDKGIIWPESIAPFEVVLCPMGYDRSEAVREQADKLYAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L + G DV DD GE+ G FA +L+G P ++++G + + + K+E + R + + Sbjct: 502 LVEAGIDVILDDRGERPGVMFADWELIGVPHRLVIGDRGLKEGKLEYQGRRDAEATLLPV 561 Query: 432 EEVINYASHRFS 443 +E + Sbjct: 562 DEAAQTVIAKVR 573 >gi|239905697|ref|YP_002952436.1| threonyl-tRNA synthetase [Desulfovibrio magneticus RS-1] gi|259516431|sp|C4XL11|SYT_DESMR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|239795561|dbj|BAH74550.1| threonyl-tRNA synthetase [Desulfovibrio magneticus RS-1] Length = 647 Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats. Identities = 81/434 (18%), Positives = 153/434 (35%), Gaps = 40/434 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 Y I + RD +L L + + G+ W P G+ + R E Sbjct: 228 LKTYLHHIEEAKKRDHRKLGAQLDLFS-FSEEVGAGMCIWHPKGELIRTIIEDFERREHL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 R G + P + +LW SG YD+Y + M + ++++ P + I++S + Sbjct: 287 RRGYDLVRGPLILRRELWERSGHYDNYRENM-YFTEIDEQSYGIKPMNCLSHMLIYKSRV 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP ++++ + R E G++R R+F DA+ + + + Sbjct: 346 RSYRDLPQRYFELGVVHRHEKSGVLHGLLRVRQFTQDDAHILCRPDQLQEEITGVVRFV- 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + G +F T + S + D + + Sbjct: 405 ------------------QDVVGLFGFDFEAELSTRPEKSIGSDEDWDRATKALVDAMES 446 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I + E A Y D+ KL D+L + + + F ++ Sbjct: 447 IGLPYEVNEGDGAFYGPKIDI---KLKDALDRRWQCATIQCD----FTLPERFD----LV 495 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + ADG+ + +GA+ V+ G W V + + Sbjct: 496 YTDADGERKRPVMLHRVILGAVERFLGVLIEHTAGALPTWLSPVQARILIVT------DA 549 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ++ E+ ARL + G V DD E++G + A + P ++ G K + ++ Sbjct: 550 QKEFAEQALARLKEAGIRVELDDRNEKLGFKVREAQVEKIPYMLVAGDKEKELGGLNVRL 609 Query: 421 RLTGIREDMSLEEV 434 R +L+EV Sbjct: 610 RSGENLGVKTLDEV 623 >gi|304315915|ref|YP_003851060.1| prolyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777417|gb|ADL67976.1| prolyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 570 Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats. Identities = 118/265 (44%), Positives = 164/265 (61%), Gaps = 1/265 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +AEI SH LML+ M+ + + G+Y +LPLG++ L + I+REE Sbjct: 1 MRLSQLLIPTLREVPAEAEIPSHTLMLKAAMMRKLASGVYIYLPLGKRVLKKIEEIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P + A+L ESGR+D +G EM +L DRND+ GPTHEEV TD+ R+ Sbjct: 61 MDRAGAQEVLMPAIIPAELLKESGRWDVFGPEMFKLKDRNDREFCLGPTHEEVFTDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP T YQIQ K+RDE RPRFGVMRSREF+MKDAYSFD+ +G S++KM+ + Sbjct: 121 EVKSYRQLPLTIYQIQTKYRDERRPRFGVMRSREFIMKDAYSFDVDWDGLDASFDKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK + A+SG +GG S EF+V + GE + + E + Sbjct: 181 YCRIFDRCGLKYTVVEADSGAMGGKDSKEFMVTSSVGEAVIAYCDSC-GYAANEEKAECT 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 + ++ Y +E Sbjct: 240 VEHKSDEEIKPLEKIYTPDVRTIDE 264 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 103/190 (54%), Gaps = 3/190 (1%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 SD+ D P RGIEVGHIF GTKYS + A + +G + + MG Sbjct: 381 VVSDIRKVVDGDKCPRCGNPLKLERGIEVGHIFKLGTKYSDALGANYIDENGNEKPMIMG 440 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R+ AA IE +HD KGIIWP S+AP+ ++ + + R+ EKIY LSK Sbjct: 441 CYGIGLNRIAAAAIEQNHDDKGIIWPMSIAPYHAIVVPVNVSNDAQRNLAEKIYDELSKA 500 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G + DD + G +F ADLLG P+++ VG K SD+ VE+K R +++ +EV+ Sbjct: 501 GIETLIDDRDLRAGVKFNDADLLGIPIRITVGKK-ASDNIVELKLRRDENSIELNYDEVV 559 Query: 436 NYASHRFSNN 445 N N+ Sbjct: 560 NKVKELIINS 569 >gi|269119306|ref|YP_003307483.1| prolyl-tRNA synthetase [Sebaldella termitidis ATCC 33386] gi|268613184|gb|ACZ07552.1| prolyl-tRNA synthetase [Sebaldella termitidis ATCC 33386] Length = 571 Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats. Identities = 127/281 (45%), Positives = 174/281 (61%), Gaps = 1/281 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK F+ +E P++AE+ SHKLMLR MI + + G+YS+LPLG + L V I+REE Sbjct: 1 MRLSKAFVKTYKEAPKEAEVISHKLMLRASMIKRLASGVYSYLPLGNRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +++GA E+ +P LQ ADLW ESGR+ +YG E++R+ DR+++ GPTHEEV+TDI R+ Sbjct: 61 MDKSGAQEVFMPVLQPADLWKESGRWIAYGPELMRMKDRHEREFALGPTHEEVVTDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF T E Y M + Sbjct: 121 EINSYKDLPMNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHTTHESLDEEYLNMKTT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG IGGD++HEF+VLA++GE V + T Sbjct: 181 YENIFTRCGLDFRAVEADSGSIGGDVTHEFMVLAESGEDDVLYCDSCDYAANKEKATSKA 240 Query: 241 DIISLNSIVEQWTAPYAA-TSDVHNEKLFDSLPENKRVSAR 280 D + + T + + F ++P +K V A Sbjct: 241 DFKESDEEAKSIELVETPNTWTIEDVAAFFNIPTSKTVKAI 281 Score = 160 bits (404), Expect = 5e-37, Method: Composition-based stats. Identities = 72/191 (37%), Positives = 106/191 (55%), Gaps = 3/191 (1%) Query: 256 YAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 Y T D+ K + P ARGIEVGHIF GTKYS M A +GK ++ Sbjct: 382 YDMTGDIREAKEGEKCPRCGGTLKIARGIEVGHIFELGTKYSEAMKANVLDENGKQATLK 441 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R+++A IE ++D GIIWP ++AP+++ +I D+ E +Y L Sbjct: 442 MGCYGIGVSRIMSAAIEQNYDENGIIWPVNIAPYEVDVIIPNIKDKDQVRVAEDVYQLLK 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 DV DD E+ G +F ADL+GFP+++I G K +++ KVE+K R TG E + + Sbjct: 502 DHNIDVILDDRDERAGFKFKDADLIGFPMKIITG-KSIAEGKVEVKDRKTGNTEIVEIGT 560 Query: 434 VINYASHRFSN 444 +++Y + Sbjct: 561 LLDYVKNHLGK 571 >gi|310815279|ref|YP_003963243.1| threonyl-tRNA synthetase [Ketogulonicigenium vulgare Y25] gi|308754014|gb|ADO41943.1| threonyl-tRNA synthetase [Ketogulonicigenium vulgare Y25] Length = 648 Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 152/441 (34%), Gaps = 45/441 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + +L+E RD ++ L + + + G W P G + +R Q + Sbjct: 234 KAHMTMLEEAAKRDHRRLGREMDLF--HMQEEAPGQVFWHPNGWTVYTALQDYMRRRQRK 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G +E++ P + + LW +SG +++Y M + + P + IF Sbjct: 292 DGYVEVNTPQVVNRVLWEKSGHWENYRDNMFIVEVDEEGAKEKVVNALKPMNCPCHVQIF 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR LP + R E G+MR R F D + F T + + K Sbjct: 352 NHGLKSYRELPLRMAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFC-TEDQIESETKKF 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 ++ LG +S ++ + P + E A+ C K D+ + Sbjct: 411 IEFLASVYADLGFESWRVKLSTRPEKRIGTEESWDHAEQSLGN-ACRKAGYDYELQ---- 465 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 E A Y + L D++ + + ++ Sbjct: 466 ------------EGEGAFYGPKLEF---VLTDAIGRDWQCGTLQVDPNLP--------ER 502 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + A + G DG H + +G+ ++ + GK W S++ Sbjct: 503 LDANYIGQDGAKHRPIMLHRACLGSFERFVGILIENFAGKLPFWLAPRQVVVASIV---- 558 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++ A LS G D E+I + L PL + +G++ V + V Sbjct: 559 --SDADDYVHEVVAALSAAGVRAEADTRNEKINYKVREHSLGKVPLILAIGAREVEERTV 616 Query: 417 EIKHRLTGIREDMSLEEVINY 437 ++ MSL+ ++ Sbjct: 617 TVRRLGENQTATMSLDAILAE 637 >gi|254881560|ref|ZP_05254270.1| threonyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA] gi|294778842|ref|ZP_06744259.1| threonine--tRNA ligase [Bacteroides vulgatus PC510] gi|254834353|gb|EET14662.1| threonyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA] gi|294447295|gb|EFG15878.1| threonine--tRNA ligase [Bacteroides vulgatus PC510] Length = 646 Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats. Identities = 81/445 (18%), Positives = 156/445 (35%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L KG+ WLP G + +R Q R Sbjct: 230 EYLVMLEEAKKRDHRKIGKEMDLFM-FTDMVGKGLPMWLPKGTALRIRLQDFLRRIQARY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + +L++ SG Y YGK+ + + P + I+++ Sbjct: 289 DYQEVMCPPIGNKNLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F P+ K + ++ Sbjct: 349 RSYKDLPLRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHLFCR-PDQVKEEFLRVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + +++ + D + + D + + Sbjct: 408 NIVFKSMNFENVEAQISLR--------------DKVNREKYIGSDENWEKAEQAIIEACE 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + VE A Y D + D++ ++ ++ Sbjct: 454 EKGLTAKVEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFQL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G+D + H + G+M AV+ GK +W + I + Sbjct: 503 EYMGSDNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LTPDQVAILPISE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + E++ A L K DD E+IG + ++ P +IVG K + +V ++ Sbjct: 557 KFNEYAEQVKAELRKFDVRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVAVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M +EE + SN Sbjct: 617 KQGEGDKGTMKIEEFGKNLAEEVSN 641 >gi|330752453|emb|CBL87403.1| threonyl-tRNA synthetase [uncultured Flavobacteria bacterium] Length = 646 Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats. Identities = 77/439 (17%), Positives = 152/439 (34%), Gaps = 36/439 (8%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD +L L T + +G+ WLP G + +++ Q + G + Sbjct: 235 LEEAKKRDHRKLGKQLELFT-FSKKVGQGLPLWLPNGAALRSRLEDFLKKAQVKAGYEMV 293 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 S P + +L+V SG Y+ YG++ + + ++ + P + +I+ SY+ Sbjct: 294 STPHIGQKELYVTSGHYEKYGEDSFQPIETPKAEEEFLLKPMNCPHHCEIYNFKPYSYKE 353 Query: 128 LPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP + + +R E G+ R R F DA+ F TP+ + + L +F Sbjct: 354 LPKRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFC-TPDQLDSEFKNVIDLVLYVFR 412 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 LG ++ + + S D D + +D Sbjct: 413 SLGFENFTAQVSLRD-------------PKTPEKYIGSVDNWDKSEKAIINAAEDKGLDY 459 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 I A Y D + D+L + ++ ++ T+KGAD Sbjct: 460 VIETGEAAFYGPKLDFM---VKDALGRSWQLGTIQVDYNLP--------ERFDLTYKGAD 508 Query: 307 GKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 + H + G++ A++ G +W + I + Sbjct: 509 NESHRPVMIHRAPFGSLERFVAILLEHTAGNFPLW------LMPQQVVILTISENYEKYA 562 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +K+ L DD E +G + A++ P +IVG + + + ++ Sbjct: 563 QKVLNLLEINEIRGLIDDRSETMGKKIRDAEIKKIPYMIIVGEQEEKSATLSVRQHGGED 622 Query: 426 REDMSLEEVINYASHRFSN 444 ++SLE + + Sbjct: 623 LGNLSLEAFVKVVKAEINK 641 >gi|304309881|ref|YP_003809479.1| Threonyl-tRNA synthetase [gamma proteobacterium HdN1] gi|301795614|emb|CBL43813.1| Threonyl-tRNA synthetase [gamma proteobacterium HdN1] Length = 647 Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats. Identities = 80/428 (18%), Positives = 147/428 (34%), Gaps = 41/428 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD L L + + G+ W P G V +R+ Sbjct: 241 KAHLTLLEEAAKRDHRRIGKDLDLF--HQQEEAPGMVFWHPKGWAIWQKVEQYVRKVYRE 298 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 +G E+ P + LW +SG +++Y + M + + P + I+ + + Sbjct: 299 SGYQEVRGPQILDVSLWKKSGHWENYQENMF-FTESEKRTYAVKPMNCPGHVQIYNNTLH 357 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP + + R+E G+MR R F D + F + + Sbjct: 358 SYRELPIRYAEFGGCHRNEPSGALHGIMRVRAFTQDDGHIFCTEDQVQAEVTAFHRQ-AM 416 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +++ G ++I ++ P + + A+ G + +P E Sbjct: 417 KVYADFGFENISVKLALRPDKRIGTEDAWDKAENGLRAALAAAGVAWEELPGE------- 469 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + H L DS+ R ++G I F ++A + Sbjct: 470 ----------GAFYGPKIEYH---LKDSIG-------RAWQMGTI-QFDPMMPERLNAEY 508 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + + + +G+M V+ G +W V ++ Sbjct: 509 VDENSQRQRPIMLHRAIVGSMERFIGVLIEHFAGNFPLWLSPVPVVVATIT------DDA 562 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 RD E + A+L G D E+IG + P +VG + ++ KV I+ Sbjct: 563 RDWAETVVAQLKAAGIQAEADLRNEKIGYKVREHSNAKIPQIWVVGKQEAAEQKVAIRRL 622 Query: 422 LTGIREDM 429 + E + Sbjct: 623 GSQQNEVV 630 >gi|299533556|ref|ZP_07046932.1| threonyl-tRNA synthetase [Comamonas testosteroni S44] gi|298718462|gb|EFI59443.1| threonyl-tRNA synthetase [Comamonas testosteroni S44] Length = 639 Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats. Identities = 82/442 (18%), Positives = 140/442 (31%), Gaps = 36/442 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L I +HS G W P G V +R G Sbjct: 231 YLFRLEEAEKRDHRKLGRELDLF--HIDEHSPGTVFWHPKGWAVWQQVEQYMRRVYQDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D Y + M D + P + IF+ IKSY Sbjct: 289 YQEVKAPQILDKGLWEKTGHWDKYRENMFT-TDSEKREYALKPMNCPGHIIIFKQGIKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F + R+E G+MR R F D + F T + + ++ Sbjct: 348 RDLPLRFGEFGNCHRNEPTGSLHGIMRVRAFTQDDGHIFC-TEDQIQAEVTAFTSLLQKV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G +I R + P + E D + Sbjct: 407 YADFGFTNILYRLSTRPEKRIGTDE-----------------AWDKAENALAEGLRASGC 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D+L + ++ + A F G Sbjct: 450 EFEYLPGEGAFYGPKIEY---TLKDALGREWQCGTIQVDPNMP--------ERLDAEFVG 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + +G++ ++ H G W L A ++ Sbjct: 499 EDGERHRPIMLHRAILGSLERFIGILVEHHSGALPAWL--APVQAAVLNITDAQADYAQE 556 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +K+ L V D E+I + + P ++ G K + V ++ R Sbjct: 557 VAQKLQKALPNQSLRVVTDLRNEKITYKIREHSMQKLPYILVAGDKEKAAGAVAVRARGN 616 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS++ I + + Sbjct: 617 KDLGVMSVDAFIELLAKDIAAK 638 >gi|150006539|ref|YP_001301283.1| threonyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482] gi|319642944|ref|ZP_07997580.1| threonyl-tRNA synthetase [Bacteroides sp. 3_1_40A] gi|166223322|sp|A6L7J7|SYT_BACV8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|149934963|gb|ABR41661.1| threonyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482] gi|317385492|gb|EFV66435.1| threonyl-tRNA synthetase [Bacteroides sp. 3_1_40A] Length = 646 Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats. Identities = 81/445 (18%), Positives = 156/445 (35%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L KG+ WLP G + +R Q R Sbjct: 230 EYLVMLEEAKKRDHRKIGKEMDLFM-FTDMVGKGLPMWLPKGTALRIRLQDFLRRIQARY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + +L++ SG Y YGK+ + + P + I+++ Sbjct: 289 DYQEVMCPPIGNKNLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F P+ K + ++ Sbjct: 349 RSYKDLPLRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHLFCR-PDQVKEEFLRVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + +++ + D + + D + + Sbjct: 408 NIVFKSMNFENVEAQISLR--------------DKVNREKYIGSDENWEKAEQAIIEACE 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + VE A Y D + D++ ++ ++ Sbjct: 454 EKGLTAKVEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFQL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G+D + H + G+M AV+ GK +W + I + Sbjct: 503 EYMGSDNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LTPDQVAILPISE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + E++ A L K DD E+IG + ++ P +IVG K + +V ++ Sbjct: 557 KFNEYAEQVKAELRKFDVRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVAVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M +EE + SN Sbjct: 617 KQGEGDKGTMKIEEFGKNLAEEVSN 641 >gi|146329716|ref|YP_001210021.1| prolyl-tRNA synthetase [Dichelobacter nodosus VCS1703A] gi|166980118|sp|A5EXK9|SYP_DICNV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|146233186|gb|ABQ14164.1| prolyl-tRNA synthetase [Dichelobacter nodosus VCS1703A] Length = 572 Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats. Identities = 128/237 (54%), Positives = 166/237 (70%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+++L +E+P +AE+ SH+LMLR GMI Q + GIYSWLPLG + L+ V+AIIREE Sbjct: 1 MRLSQFWLVTKKESPAEAEVISHQLMLRAGMIRQTAVGIYSWLPLGLRVLNKVSAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P Q A+LW ESGR+ +YG E+ R DR+ + GPTHEEV+TD+ R Sbjct: 61 MDRAGALEVVMPAAQPAELWQESGRWHAYGPELQRFIDRHQRDYCIGPTHEEVVTDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR REF+MKD YSFDL G K+SY KM+ + Sbjct: 121 DLSSYKQLPVNLYQIQTKFRDEIRPRFGVMRGREFVMKDGYSFDLDVAGMKNSYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF RLGL P+ A++G IGG SHEF VLA+TGE + + D+ E Sbjct: 181 YCRIFDRLGLNYRPVIADNGAIGGTGSHEFHVLAETGEDSIAF-SNASDYAANIEKA 236 Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 70/194 (36%), Positives = 100/194 (51%), Gaps = 3/194 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A T+D+ N D P+ + + RGIEVGH+F G KYS M+ T DG Sbjct: 376 ERDAEITRTADIRNVVEGDPSPDGQGTLLIRRGIEVGHVFQLGEKYSKAMNLTVPLEDGT 435 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 MG YGIG RV+AA IE +HD GIIW +APF ++++ I + RDA E Sbjct: 436 LCTPLMGCYGIGVTRVIAAAIEQNHDENGIIWSKELAPFSVAILPINADKSEAVRDAAEA 495 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +Y + + G DV DD + G FA DL+G P ++++ K ++ VE K R Sbjct: 496 LYQKFLQAGVDVVLDDRNRRAGVMFADIDLIGIPARIVISDKTLATGSVEFKRRNEQETF 555 Query: 428 DMSLEEVINYASHR 441 +SLEE++ Sbjct: 556 HISLEEIVAQFCAE 569 >gi|126663528|ref|ZP_01734525.1| threonine--tRNA ligase (threonine tRNA synthetase) [Flavobacteria bacterium BAL38] gi|126624476|gb|EAZ95167.1| threonine--tRNA ligase (threonine tRNA synthetase) [Flavobacteria bacterium BAL38] Length = 633 Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats. Identities = 81/445 (18%), Positives = 161/445 (36%), Gaps = 39/445 (8%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E R D +L L + +G+ WLP G D + +++ Q + G Sbjct: 216 YLELLEEAKRRDHRKLGKELDLFH-FSPKVGQGLPLWLPKGAALRDRLEQFLKKAQKKAG 274 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIK 123 ++ P + DL+V SG Y YG + + + + P + +I+ + Sbjct: 275 YEQVVTPHIGMKDLYVTSGHYAKYGADSFQPIHTPAEGEEFLLKPMNCPHHCEIYNARPW 334 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP + + +R E G+ R R F DA+ F TP+ + + L Sbjct: 335 SYKDLPKRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFC-TPDQLDTEFKNVIDLVL 393 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +F LG ++ + + + S + + + + D Sbjct: 394 YVFGSLGFENFTAQVSVRDLD-------------NPDKYIGSVENWEKAENAIISAAKDK 440 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I A Y D + D+L + ++ ++ T+ Sbjct: 441 GLNYVIEAGEAAFYGPKLDFM---VKDALGRSWQLGTIQVDYNLP--------ERFELTY 489 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 KG+D K H + G+M A++ G IW +SL + Sbjct: 490 KGSDDKLHRPVMIHRAPFGSMERFIAILLEHTAGNFPIWLMPEQAIILSL------SEKY 543 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + +K+ L D+ E IG + A++ +P +IVG + + + ++ R Sbjct: 544 ENYAKKVLDLLENHEIRALIDNRNETIGKKIREAEMNKYPFMLIVGEEEEKNGTISVRQR 603 Query: 422 LTGIREDMS--LEEVINYASHRFSN 444 + ++S +E+ + + Sbjct: 604 GQEGKGNISVTIEQFAAMINEEINK 628 >gi|121603656|ref|YP_980985.1| prolyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2] gi|152112939|sp|A1VK86|SYP_POLNA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|120592625|gb|ABM36064.1| prolyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2] Length = 581 Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats. Identities = 119/237 (50%), Positives = 160/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SH+LM+R G+I + GIY+++P+G + + V AI+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHQLMMRAGLIKKLGAGIYNYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIEMS+P +Q A+LW E+GR+++ G E+LR+ DR+ + + PT EEV+TD+ R Sbjct: 61 MNRAGAIEMSMPVIQPAELWQETGRFEAMGPELLRIKDRHGRDFVVQPTSEEVVTDVMRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP YQIQ KFRDE RPRFG+MR REF+MKDAYSFD +K SY M + Sbjct: 121 DIRSYKQLPKNLYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDQTAAKVSYQNMAEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R GL + A+SG IGGDLS EF V+A TGE + D+ E Sbjct: 181 YRRIFDRFGLTYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYCPT-SDYAANMEKA 236 Score = 154 bits (389), Expect = 3e-35, Method: Composition-based stats. Identities = 71/187 (37%), Positives = 107/187 (57%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K RGIEVGH+FY GTKYS M+ATF G +GK +++MG Y Sbjct: 394 ADIRNVVAGDPSPDGKGLLAIERGIEVGHVFYLGTKYSRAMNATFLGENGKPQFLEMGCY 453 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD-QVCRDACEKIYARLSKVG 376 GIG R+ AA IE +HD +GIIWPD++APF + + I + A +K+Y+ L G Sbjct: 454 GIGITRLPAAAIEQNHDERGIIWPDAIAPFTVVICPITPERFPDVKAAADKLYSELLGAG 513 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD GE+ G+ FA +L+G P +V +G + + + +E +HR + + Sbjct: 514 VDVILDDRGERPGAMFADWELIGVPHRVTIGDRGLKEGHIEYQHRRDTAASKVEAAAAFD 573 Query: 437 YASHRFS 443 + + + Sbjct: 574 FLKGKLA 580 >gi|241761215|ref|ZP_04759303.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374122|gb|EER63619.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 659 Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats. Identities = 82/456 (17%), Positives = 145/456 (31%), Gaps = 52/456 (11%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K L L+E RD ++ L + Q ++G W P G + A +R Sbjct: 233 KQLKVHLERLEEAQKRDHRRLGQEMDLF--HLQQEAQGSVFWHPNGYTIWLQLEAYLRRR 290 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADR-------------NDKAMIYG 107 E+ P L A LW SG + + + M + D M Sbjct: 291 MKNANYKEVKTPQLMDAALWEASGHWGKFRENMFVVPDEIPSTDPDKPVLSGKGNLMALK 350 Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLT 166 P + IF+ I+SYR LP + R+E G+MR R+ DA+ F Sbjct: 351 PMNCPAHIQIFKQGIRSYRELPLRMLEFGCCHRNEAHGALHGLMRVRQLTQDDAHIFCTA 410 Query: 167 PEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 + + I+ LG S ++ P E A+ G Sbjct: 411 EQIVTET-KDFVNLLDSIYRDLGFTSYAVKLSLRPELRAGDDELWDNAENGLRSALEQVG 469 Query: 227 FMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGH 286 D+ + A Y + H L D++ + ++ Sbjct: 470 ITDYEE----------------LPGEGAFYGPKLEFH---LTDAIGRTWQCGTLQLDYVL 510 Query: 287 IFYFGTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 + A++ DG + IG ++ H G+ +W V Sbjct: 511 P--------ERLDASYVAEDGSRKRPVMLHRAIIGTFERFIGILIEHHAGRFPLWMAPVQ 562 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405 +++ E + ++ G V D E+I + L P ++ Sbjct: 563 AVVATIV------SEADSFAESVVEKMKAAGLRVVSDIRNEKINYKIREHSLTKVPNILV 616 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 VG + + KV I+ + + +S++E I Sbjct: 617 VGKREAEEGKVAIRKLGSRDQIILSVDEAIALLLEE 652 >gi|326538797|gb|ADZ87012.1| threonyl-tRNA synthetase [Brucella melitensis M5-90] Length = 661 Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 152/445 (34%), Gaps = 40/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD ++ L + G+ W G K N+ + +R + Sbjct: 236 QAYLHMLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 293 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 294 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 353 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F + + Sbjct: 354 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLQIN 413 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G + I ++ + P S E A++ V E Sbjct: 414 -DHILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVL------------EQI 460 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I+ A Y + L D++ + ++ FG Sbjct: 461 RQQSNNIKTGILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------ 511 Query: 298 MSATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G K V + G+M ++ + G +W V ++ Sbjct: 512 --AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATIT---- 565 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + ++ A+L G V D E+I + L P+ ++ G + + V Sbjct: 566 --SDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHSLQKVPVILVCGKREAEEKTV 623 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + +E M+L+E I Sbjct: 624 NMRRLGSRDQESMTLDEAIARLCEE 648 >gi|312877991|ref|ZP_07737931.1| prolyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A] gi|311795226|gb|EFR11615.1| prolyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A] Length = 572 Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats. Identities = 122/265 (46%), Positives = 162/265 (61%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F+P L+E P DAEI SHKLMLR+G + Q S GIY +LPLG + L + I+REE Sbjct: 1 MKVSELFMPTLKETPSDAEIESHKLMLRSGFMRQLSSGIYVYLPLGYRVLRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ + L +LW ESGR+ +G EM R+ DRN++ GPTHEE T I R+ Sbjct: 61 MDRSGAQEVHMSALMPKELWEESGRWAVFGPEMFRIKDRNEREYCLGPTHEEAFTYIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR+LP YQIQ KFRDE RPRFGVMR REF MKDAYSFD+ +G SY KM+ + Sbjct: 121 EITSYRDLPKILYQIQTKFRDERRPRFGVMRCREFTMKDAYSFDIDEKGLDISYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+RIF R GL + A++G +GG SHEF+V + GE ++ K + D Sbjct: 181 YVRIFKRCGLDVKIVEADTGAMGGASSHEFMVPSSVGEAEIAYCKSCGYAANLEKAECLD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 + N +++ Y E Sbjct: 241 TPVENNEELKEKQEVYTPNVRTIEE 265 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 68/194 (35%), Positives = 103/194 (53%), Gaps = 4/194 (2%) Query: 256 YAATSDVHNEKLFDSLPEN---KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 +D+ N D P+ K RGIEVGHIF GTKY+ + + G+ + Sbjct: 375 VTKFADLRNITQDDLCPKCRSQKVTIERGIEVGHIFKLGTKYTQAFNCVYTDEKGEKKLM 434 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R AA+IE HD GIIWP +VAP+++ ++ + D+ +IY L Sbjct: 435 IMGCYGIGINRTAAAIIEQMHDEDGIIWPITVAPYEVIIVPVNVKDEAQNKIAFEIYENL 494 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 K G +V DD E+ G +F ADL+G P +V VG K VS+ K+EI++R T ++ ++ Sbjct: 495 QKNGVEVLIDDRDERAGVKFKDADLIGIPFRVTVGKK-VSEGKLEIRNRRTKESFEVEID 553 Query: 433 EVINYASHRFSNNR 446 + + + + Sbjct: 554 NAVEFIINLIKQEK 567 >gi|284048708|ref|YP_003399047.1| prolyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731] gi|283952929|gb|ADB47732.1| prolyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731] Length = 571 Score = 240 bits (611), Expect = 4e-61, Method: Composition-based stats. Identities = 134/364 (36%), Positives = 187/364 (51%), Gaps = 6/364 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ + P L+E P +A I SHKLMLR G I + + G+YS+LPL ++L + IIREE Sbjct: 1 MRVSQLYAPTLREVPAEAVIESHKLMLRAGYIRKVAGGLYSYLPLAWRSLRKIEEIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 TGA E+ +P +Q +++W ESGR+ +YG EM +L DR+ + GPTHEE++T + R Sbjct: 61 MVPTGAQEIMMPIVQPSEIWQESGRWPAYGAEMFKLKDRHGRDFCLGPTHEELVTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP T YQIQ KFRDE RPRFG+MRSREF+MKDAYSFD EG SY + + Sbjct: 121 DLRSYRQLPVTLYQIQSKFRDEKRPRFGLMRSREFIMKDAYSFDKDAEGLDKSYQDEYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP--IPSENTD 238 Y RIF R GL P+ A+SG IGG SHEF+ LAD+GE + +E Sbjct: 181 YSRIFTRCGLDYRPVEADSGAIGGKGSHEFMALADSGEAGIVYCDTCEYAADVEKAECAA 240 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN-KRVSARGIEVGHIFYFGTKYSLP 297 + +E+ P +T + + L + ++ K V+ E + F Sbjct: 241 IEAPAEEPKELEKKATPDCSTIEAVCQYLGSPIEKSVKAVAFVTDEGKLVLCFVRGDKEV 300 Query: 298 MSATFKGADGKD---HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 A G + G + I + D I+ +V Sbjct: 301 NDTKVVNAVGCNEVDMAPDDLIREAGTVPGFMGPIGLNKDKAIILIDHTVMHMHNVCCGA 360 Query: 355 KAHD 358 D Sbjct: 361 NEKD 364 Score = 152 bits (385), Expect = 9e-35, Method: Composition-based stats. Identities = 67/192 (34%), Positives = 101/192 (52%), Gaps = 3/192 (1%) Query: 256 YAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 Y +D+ D P + ARGIEVG +F TKYS + AT+ DGK+H + Sbjct: 378 YTQVADISTAVAGDKCPHCDGHLKEARGIEVGQVFKLNTKYSEALHATYLDVDGKEHPLV 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R +AA IE HD GII P ++AP+++ ++ + D+ +I+ L+ Sbjct: 438 MGCYGIGVGRTLAAAIEQHHDKDGIIMPRNIAPYQVMVLAMNVKDEESWQKAVEIHDALN 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE- 432 + G D DD E+ G +F ADL+G PL++++G K + + +E K R G D+S E Sbjct: 498 QAGIDTLLDDRDERAGVKFKDADLIGCPLRIVIGPKTMKRNAMETKLRCNGEMADVSFEG 557 Query: 433 EVINYASHRFSN 444 + I Sbjct: 558 DWIQAIRDILDK 569 >gi|254511025|ref|ZP_05123092.1| threonyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11] gi|221534736|gb|EEE37724.1| threonyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11] Length = 652 Score = 240 bits (611), Expect = 4e-61, Method: Composition-based stats. Identities = 86/443 (19%), Positives = 148/443 (33%), Gaps = 45/443 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD ++ L + + + G W P G K + +R Q+R Sbjct: 238 KAHLHMLEEAAKRDHRKLGREMDLF--HMQEEAPGQIFWHPNGWKIYTTLQDYMRRMQDR 295 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIY-----GPTHEEVMTDIF 118 G +E++ P + LW SG +D Y + M + + A P + +F Sbjct: 296 DGYVEVNTPQVVDRKLWEASGHWDKYQENMFIVEVDEEHAREKAINALKPMNCPCHVQVF 355 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F D + F + + + K Sbjct: 356 NQGLKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFC-SEDQIESETAKF 414 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +++ LG ++ + P S E D + Sbjct: 415 IAFLSKVYADLGFHDWTIKLSTRPEKRIGSDE-----------------SWDIVEKALGD 457 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 ++E A Y + L D++ + + ++ Sbjct: 458 ACKAAGYDYEVLEGEGAFYGPKLEF---TLTDAIGRDWQCGTLQVDPNLP--------ER 506 Query: 298 MSATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + A F GADG H + +G+ ++ H GK W S+ Sbjct: 507 LDANFIGADGAKHRPFMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASIT---- 562 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++ L G D E+I + + P+ + VG + V + V Sbjct: 563 --SEADDYVMEVVDTLKAAGIRAEADIRNEKINYKVREHSVSKVPVILAVGHREVEERTV 620 Query: 417 EIKHRLTGIREDMSLEEVINYAS 439 I+ + SLE V N S Sbjct: 621 TIRRLGEKQTQVQSLETVTNELS 643 >gi|293400866|ref|ZP_06645011.1| threonine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305892|gb|EFE47136.1| threonine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 577 Score = 240 bits (611), Expect = 4e-61, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 149/442 (33%), Gaps = 40/442 (9%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD + ++ L M+ +++ G+ +LP G + + EE + Sbjct: 172 LHMLEEAKKRDHKKLGREMGLF--MMSEYAPGMPFFLPNGMIIRNLLENFWYEEHTKENY 229 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P + S +LW SG + +Y + M +D+ P + +F++ + SY+ Sbjct: 230 KFIKTPIMMSKELWEVSGHWANYKENMYTTM-VDDREFAIKPMNCPGSLLVFKNGLHSYK 288 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ R E G+ R R F DA+ F + ++ R++ Sbjct: 289 DLPLRMGELGQVHRHEASGALNGLFRVRTFTQDDAHIFMRPDQIESE-VKELINFIDRVY 347 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 GL + P E + + + Sbjct: 348 SIFGLSYRI-ELSTRP----------------EKKYIGDLAIWEKSEKALADACVSAGKD 390 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + A Y D H + DSL + +++ T+ Sbjct: 391 YKVNPGDGAFYGPKLDFH---IKDSLGREWQCGTIQLDMNLP--------ERFDLTYVEK 439 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG V + G++ ++ + G W ++ + H + A Sbjct: 440 DGTKVRPVMLHRVIFGSIERFIGILIEHYAGHFPTWLA-----PTQVMVVPVHYERHAQA 494 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 I +L +G D E++G + A L P Q+++G V + V ++ + Sbjct: 495 ANAINEKLLAMGFRSKSDARNEKLGYRIREAQLAKIPYQLVIGDGEVEANTVTVRRAQSK 554 Query: 425 IREDMSLEEVINYASHRFSNNR 446 M +EE I S R Sbjct: 555 ESVTMPVEEFIAKLSAEVKEKR 576 >gi|118580173|ref|YP_901423.1| prolyl-tRNA synthetase [Pelobacter propionicus DSM 2379] gi|166980138|sp|A1APU5|SYP_PELPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|118502883|gb|ABK99365.1| prolyl-tRNA synthetase [Pelobacter propionicus DSM 2379] Length = 576 Score = 240 bits (611), Expect = 5e-61, Method: Composition-based stats. Identities = 127/237 (53%), Positives = 164/237 (69%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M S+YF+P ++E P DAE+ SH+LMLR GMI + + GIY++LPLG +++ AI+REE Sbjct: 1 MFYSRYFIPTIKETPSDAEVVSHQLMLRAGMIRKLAAGIYNYLPLGLRSIRKFEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIEM +P++Q A+LW ESGR+ YGKE+LR DR D GPTHEEV+TD+ R Sbjct: 61 MNRAGAIEMLMPSVQPAELWEESGRWSFYGKELLRFRDRKDGEFCMGPTHEEVITDMVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ + SY MF + Sbjct: 121 EIKSYRQMPVNFYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFDVDSAAADGSYELMFQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y+RIF R GL + A++G IGG SHEF+VLAD+GE + + E Sbjct: 181 YMRIFERCGLNFRAVEADTGTIGGSSSHEFMVLADSGEDAIVSCDSCR-YAANVEKA 236 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 77/184 (41%), Positives = 109/184 (59%), Gaps = 3/184 (1%) Query: 258 ATSDVHNEKLFDSLPEN---KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N + D P K RGIEVGH+F GTKYS + AT+ ADGK+ + M Sbjct: 381 RFVDLRNVEAGDPCPRCEGGKLEMWRGIEVGHVFKLGTKYSQALGATYLDADGKEQVIFM 440 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G YGIG R VAA IE +HD GII+P +APF S++ + D+ A E++Y RL + Sbjct: 441 GCYGIGIGRTVAAAIEQNHDDNGIIFPLPLAPFHCSVVALNTKDKGVMAAAEEMYFRLEQ 500 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD E+ G +F DL+G PL+++VGSK +S+ KVE+K R +G +S +E Sbjct: 501 QGIEVLFDDRDERPGVKFKDNDLIGIPLRIVVGSKGLSEGKVEVKIRASGEMLLLSPDEA 560 Query: 435 INYA 438 + Sbjct: 561 VETI 564 >gi|121609349|ref|YP_997156.1| prolyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2] gi|152112961|sp|A1WKI1|SYP_VEREI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|121553989|gb|ABM58138.1| prolyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2] Length = 581 Score = 240 bits (611), Expect = 5e-61, Method: Composition-based stats. Identities = 118/237 (49%), Positives = 161/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L++ P DAE+ SH+LM+R G+I + GIYS++P+G + L + AI+REE Sbjct: 1 MKASRFFVSTLKDAPADAEVVSHQLMMRAGLIKKLGAGIYSYMPMGLRVLRKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+++P +Q A+LW E+GR+D G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 61 MNRAGAVELTMPVVQPAELWQETGRFDKMGPELLRIQDRHGRDFVVQPTSEEVITDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP FYQIQ KFRDE RPRFG+MR REF+MKDAYSFD P +K SY M + Sbjct: 121 ELRSYKQLPKNFYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDPAAAKASYLVMEQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R GL + A+SG IGGDLS EF V+A TGE + D+ E Sbjct: 181 YRRIFDRFGLTYRAVAADSGAIGGDLSEEFQVVAATGEDAIVYCPQ-SDYAANMEKA 236 Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats. Identities = 69/184 (37%), Positives = 106/184 (57%), Gaps = 3/184 (1%) Query: 259 TSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K V RGIEVGH+FY GTKYS M+A+F +GK ++MG Sbjct: 393 VADLRNVVAGDRSPDGKGVLAIERGIEVGHVFYLGTKYSRAMNASFLDENGKPQPLEMGC 452 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKV 375 YGIG R+ AA IE +HD +GIIWPD++APF + I + A +K+YA Sbjct: 453 YGIGITRLPAAAIEQNHDARGIIWPDAIAPFTAVICPIGMERSAAVQAAADKLYADFLAA 512 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD GE+ G+ FA +L+G P +V++ + + + ++E +HR ++ +++ Sbjct: 513 GIDVLLDDRGERPGAMFADWELIGVPHRVVISERGLKEDQLEYQHRRDQSATKVAAADIL 572 Query: 436 NYAS 439 + Sbjct: 573 AHVK 576 >gi|169830802|ref|YP_001716784.1| prolyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C] gi|226699139|sp|B1I2J1|SYP_DESAP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|169637646|gb|ACA59152.1| prolyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C] Length = 566 Score = 240 bits (611), Expect = 5e-61, Method: Composition-based stats. Identities = 121/321 (37%), Positives = 177/321 (55%), Gaps = 5/321 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y +P L+E P +AE+ SH+L+L+ G I + + G+Y+ LPL + L + IIREE Sbjct: 1 MRASEYLIPTLREIPAEAEVVSHRLLLKAGFIRKAASGVYTLLPLAHRVLRKIMRIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G E+ +P +Q A+LW+ SGR+ YG E+ RL DR+ + GPTHEE++T++ Sbjct: 61 MDRQGGQEILLPIMQPAELWLRSGRWHVYGPELFRLKDRHGRDFCLGPTHEEIITELVMG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++S++ LP YQIQ K+RDE RPRFG++R REF+MKD YSFD G + SY KMF + Sbjct: 121 DVRSHKQLPLLLYQIQNKYRDERRPRFGLLRGREFIMKDLYSFDRDEAGLEVSYRKMFEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGET-QVFCSKDFMDFPIPSENT-- 237 Y R+F R GL+ P+ A+SGPIGG +SHEF+VLA +GE V+C +D + E Sbjct: 181 YQRVFSRCGLEFRPVEADSGPIGGSVSHEFMVLAGSGEALVVYCPEDACGYAANVEKAES 240 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR--GIEVGHIFYFGTKYS 295 + + + P V + F + + V + G Sbjct: 241 RAERPKTKEDPLALELLPTPGKRTVEDVCAFLGVGPEQIVKTILYETDRGPCAALVRGDR 300 Query: 296 LPMSATFKGADGKDHYVQMGS 316 + A G H G Sbjct: 301 EVNEVKLQNAIGAMHLEMAGP 321 Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 72/192 (37%), Positives = 106/192 (55%), Gaps = 3/192 (1%) Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 P +D+ + D P+ R ++ARGIEVG +F GTKYS M T+ G Sbjct: 373 PGRDFPLQVVTDLRLVREEDPCPQCGRPLLAARGIEVGQVFKLGTKYSEVMGLTYLDEHG 432 Query: 308 KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + V MG YGIG R +AA +E +HD +GIIWP ++APF + ++ + D+V EK Sbjct: 433 TERPVVMGCYGIGVTRTLAAAVEQNHDEQGIIWPTAIAPFAVVVVPVNVRDEVQSALAEK 492 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 Y LS+ G +V DD E+ G +F ADL+G+PL+V VG K D VE++ R G Sbjct: 493 AYTVLSEAGVEVLLDDRPERPGVKFKDADLVGYPLRVTVG-KTAVDGLVELRLRKNGDTR 551 Query: 428 DMSLEEVINYAS 439 + + E+++ Sbjct: 552 LVGIGELVDTVR 563 >gi|145630468|ref|ZP_01786248.1| frataxin-like protein [Haemophilus influenzae R3021] gi|144983858|gb|EDJ91300.1| frataxin-like protein [Haemophilus influenzae R3021] Length = 572 Score = 240 bits (611), Expect = 5e-61, Method: Composition-based stats. Identities = 147/428 (34%), Positives = 204/428 (47%), Gaps = 39/428 (9%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWEQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y IF+RLGL ++A++G IGG SHEF VLA +GE V DF E Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDFAANIELAEAV 239 Query: 236 -------------NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 D + ++ +VEQ+ P T K D + RG Sbjct: 240 AIGERQAPTAEMCLVDTPNAKTIAELVEQFNLPIEKTVKTLIVKGADENQPLVALIIRGD 299 Query: 283 EVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 + + F + G +GA+ + I + Sbjct: 300 HELNEIKAQKHPLVADPLEFADETEIKAKIGAGVGSLGAVNLNIPAIIDRTVALMSDFSC 359 Query: 343 SVAPFKISLINIKAHDQVCRDACEKIYA------------RLS-KVGCDV--FWDDMGEQ 387 N+ V + L K G +V + Q Sbjct: 360 GANIDGKHYFNVNWERDVAIPKVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIF-----Q 414 Query: 388 IGSQFAVA 395 +G +++ A Sbjct: 415 LGKKYSEA 422 Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 110/208 (52%), Gaps = 4/208 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D ++ + D+ N D P+ K RGIEVGHIF G KYS M Sbjct: 364 DGKHYFNVNWERDVAIPKVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGKKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 AT +G DGK + MG YGIG RVVA+ IE HD + I D +APF ++++ + Sbjct: 424 KATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQHHDERGIIWPSDEIAPFTVAIVPMNMH 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + E++Y L G DV +DD E+ G FA +L+G P V++G K + + ++ Sbjct: 484 KSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLDNGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSN 444 E K+R TG +E +S +++++ + + N Sbjct: 544 EYKNRRTGEKEMISKDKLLSVLNEKLGN 571 >gi|313893443|ref|ZP_07827015.1| proline--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412] gi|313442084|gb|EFR60504.1| proline--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412] Length = 572 Score = 240 bits (611), Expect = 5e-61, Method: Composition-based stats. Identities = 112/235 (47%), Positives = 160/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M +K + P L+E P DA++ S +LMLR G + + + G+YS+LPLG +++ + AI+REE Sbjct: 1 MLATKLYAPTLREVPSDADVVSQQLMLRAGFMRKTANGLYSFLPLGWRSIKKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R A E+ +P LQ A++W ESGR+++YG EM+R+ DR+D GPTHEE++T + ++ Sbjct: 61 MDRASAQEIMMPILQPAEIWKESGRWNAYGAEMMRINDRHDNEFCLGPTHEEIITTLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP YQIQ KFRDE RPR+G+MRSREF+MKDAYSFD+ G + SY M+ + Sbjct: 121 EINSYRQLPVNLYQIQSKFRDERRPRYGLMRSREFIMKDAYSFDVDEAGLEESYKSMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF+R GL P+ A+SG IGG +HEF+ +A+ GE + D+ E Sbjct: 181 YTRIFNRCGLTFRPVEADSGAIGGSGTHEFMAIAEAGEADIVYCTKC-DYAANIE 234 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 69/178 (38%), Positives = 100/178 (56%), Gaps = 2/178 (1%) Query: 269 DSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P A+GIEVG +F GTKYS + ATF +G+ + + MG YGIG R +A Sbjct: 394 DVCPTCGGSLEHAKGIEVGQVFKLGTKYSEALQATFLDQNGRPNPMIMGCYGIGVSRTLA 453 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A IE HD GIIWP S+APF+ ++ I A D+ E IY+ L + G DV DD + Sbjct: 454 AAIEQYHDENGIIWPRSIAPFEAVIVPINAKDEALMSTSETIYSALQEAGVDVLLDDRKD 513 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 + G +F ADL+G+PL++ V + +++VEI+ R TG +++ V + N Sbjct: 514 RAGVKFKDADLIGYPLRITVSKNTLENNEVEIQIRKTGEALSCAIDSVATKVTELLQN 571 >gi|256848462|ref|ZP_05553904.1| threonyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN] gi|256714729|gb|EEU29708.1| threonyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN] Length = 601 Score = 240 bits (611), Expect = 5e-61, Method: Composition-based stats. Identities = 73/441 (16%), Positives = 153/441 (34%), Gaps = 36/441 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + RD + ++L L + + G+ WLP G + I + + G Sbjct: 189 KRQEAKERDHRVIGNQLDLF--FVDPKVGAGLPYWLPKGAAIRRTIERYIIDREVADGYE 246 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYR 126 + P L + D + SG ++ Y +M D D M P + +++ H++SYR Sbjct: 247 HVYTPVLMNLDAYKTSGHWEHYRDDMFPPMDMGDGEMLELRPMNCPSHIQVYKHHLRSYR 306 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ + R E G+ R RE + D ++F + + K+ + ++ Sbjct: 307 DLPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIRSE-FAKILKLIMSVY 365 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + R + + + + + DD+ Sbjct: 366 KDFDITDYSFRLSLRD-------------PKNVKKYYANDEMWEKSQSMLKQAMDDLSLD 412 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y D+ + +L ++ +S ++ F ++ T+ G Sbjct: 413 YYEAEGEAAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----GLTYVGK 461 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG++H + +G M A + + G W I D D Sbjct: 462 DGQEHMPVMIHRGVVGTMERFVAYLTEIYKGAFPTWLAPEQVH-----IIPVSDDKHGDY 516 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ A L V D E++G + A P ++VG +++ V ++ Sbjct: 517 ADQLGAELRAAKIRVNVDHRNEKMGYKIREAQTQKVPYTLVVGDDEMANGSVSVRKYGEK 576 Query: 425 IREDMSLEEVINYASHRFSNN 445 + MS ++ ++ ++ Sbjct: 577 EQNSMSKQDFMDELLADIASY 597 >gi|161510954|ref|YP_089255.2| prolyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E] gi|114152209|sp|Q65QU0|SYP_MANSM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 571 Score = 240 bits (611), Expect = 5e-61, Method: Composition-based stats. Identities = 123/243 (50%), Positives = 163/243 (67%), Gaps = 1/243 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L+ V IIREE Sbjct: 1 MRTSKYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPSGIRVLEKVKNIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GAIE+ +P +Q A+LW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKSGAIEVLMPVVQPAELWQESGRWEQYGLELLRFNDRGNRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTKESLQATYDVMYQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V D+ E + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDYAANIELAEAI 239 Query: 241 DII 243 + Sbjct: 240 AVG 242 Score = 177 bits (448), Expect = 4e-42, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 112/207 (54%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D +I + +D+ N D P+ K + RGIEVGHIF G KYS M Sbjct: 364 DGKHYFNINWERDVALPKIADLRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGQKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 +AT +G DGK + MG YGIG RVVA+ IE HD + I D++APF ++++ + Sbjct: 424 NATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQHHDERGIIWPSDAIAPFTVAIVPMNMH 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + E++Y L G +V +DD E+ G FA +L+G P VI+G K + + ++ Sbjct: 484 KSESVQAYAEELYQTLLAQGVEVIFDDRKERPGVMFADMELIGVPHMVIIGEKNLENGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K+R T ++ ++ ++++++ + Sbjct: 544 EYKNRRTSEKQMIAKDQLLDFLKANVN 570 >gi|152977868|ref|YP_001343497.1| prolyl-tRNA synthetase [Actinobacillus succinogenes 130Z] gi|171472919|sp|A6VKR5|SYP_ACTSZ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|150839591|gb|ABR73562.1| prolyl-tRNA synthetase [Actinobacillus succinogenes 130Z] Length = 571 Score = 240 bits (611), Expect = 5e-61, Method: Composition-based stats. Identities = 148/429 (34%), Positives = 203/429 (47%), Gaps = 41/429 (9%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRSMASGLYNWLPTGVKVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +QSA+LW ESGR++ YG E+LR +DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQSAELWQESGRWEQYGPELLRFSDRGNRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHTTQESLQQTYEVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP------- 233 Y IF RLGL ++A++G IGG SHEF VLA +GE V DF Sbjct: 181 YTNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDFAANIELAEAI 239 Query: 234 -----------SENTDFDDIISLNSIVEQWTAPYAATSDVHNEK-LFDSLPENKRVSARG 281 E D + ++ +VEQ+ P T K + P + Sbjct: 240 AVGERQAPGKAMELVDTPNAKTIAELVEQFNLPIEKTVKTLIVKGATEDAPLVALIIRGD 299 Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 E+ I + F + G +G + + I + Sbjct: 300 HELNEI-KAQKHPLVADPLEFADETEIKAKIGAGVGSLGPVNLNIPAIIDRSVALMSDFG 358 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYA------------RLS-KVGCDV--FWDDMGE 386 NI + L K G +V + Sbjct: 359 AGANIDGKHYFNINWERDAAMPEAFDLRNVAEGDPSPDGKGTLQIKRGIEVGHIF----- 413 Query: 387 QIGSQFAVA 395 Q+G +++ A Sbjct: 414 QLGKKYSEA 422 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D +I + A D+ N D P+ K RGIEVGHIF G KYS M Sbjct: 364 DGKHYFNINWERDAAMPEAFDLRNVAEGDPSPDGKGTLQIKRGIEVGHIFQLGKKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 +AT +G DGK + MG YGIG RVVAA IE HD + I D +APF ++++ + Sbjct: 424 NATVQGEDGKPLVMTMGCYGIGVTRVVAAAIEQHHDERGIIWPTDEIAPFTVAIVPMNMH 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + R E++Y L G DV +DD E+ G FA +L+G P V++G K + ++ Sbjct: 484 KSESVRAFAEELYQTLKAQGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLDKGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K+R G ++ ++ + ++ + + Sbjct: 544 EYKNRRNGEKQMIAKDRLLAFLAENVK 570 >gi|256830760|ref|YP_003159488.1| threonyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028] gi|256579936|gb|ACU91072.1| threonyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028] Length = 644 Score = 240 bits (611), Expect = 5e-61, Method: Composition-based stats. Identities = 76/437 (17%), Positives = 149/437 (34%), Gaps = 40/437 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 I + RD +L L + + G+ W P G + + +E R G Sbjct: 230 LAMIEEAKKRDHRKLGPQLDLFSFH-ERGGAGMAYWHPKGGLVRTILEDFVNKEMIRRGY 288 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P + DLW SG Y +Y + M + ++ P + I+ + +SYR Sbjct: 289 GIVRTPQILKRDLWETSGHYANYRENM-YFTEIDEVPYGVKPMNCVAHMLIYNTSQRSYR 347 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ + R EL G+MR R+F DA+ + + Sbjct: 348 DLPVRLFEFGVVHRHELSGVLHGLMRVRQFTQDDAHIICRPDQLLDE-----IKGVMTWI 402 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 L E+ + T + S + + + Sbjct: 403 QDLMGVFG--------------FEYSMEISTRPEKSIGSDADWERATSALMDAMGQMELP 448 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 +I E A Y DV KL D L + S ++ F ++ + G Sbjct: 449 YTINEGDGAFYGPKIDV---KLRDCLGRQWQCSTIQVD----FTLPDRFD----LLYVGE 497 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG+ H + +G++ ++ + +P +AP + ++ + + + Sbjct: 498 DGERHRPVMVHRAIMGSVERFIGILT---EHFAGAFPAWLAPVQARILTVTDNHD---EF 551 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 K L + G V D E++G + A + P +++G + V + V ++ Sbjct: 552 ARKCQDALQREGVRVELDLRNEKLGYKVREAQMEKVPYALVIGDQEVEQACVNVRMLGGN 611 Query: 425 IREDMSLEEVINYASHR 441 MS++ ++ Sbjct: 612 NLGVMSVDAFADHLRQE 628 >gi|15604092|ref|NP_220607.1| threonyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E] gi|2501061|sp|O05947|SYT_RICPR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|2073475|emb|CAA72469.1| threonyl-tRNA synthetase [Rickettsia prowazekii] gi|3860783|emb|CAA14684.1| THREONYL-TRNA SYNTHETASE (thrS) [Rickettsia prowazekii] gi|292571818|gb|ADE29733.1| Threonyl-tRNA synthetase [Rickettsia prowazekii Rp22] Length = 635 Score = 240 bits (611), Expect = 5e-61, Method: Composition-based stats. Identities = 78/443 (17%), Positives = 157/443 (35%), Gaps = 40/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y + + RD +L L + ++G+ W G + + IR++ + Sbjct: 230 NYLFMLEEAEKRDHRKIGKELDLF--HFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKN 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G IE+ P L LW SG + + +M L + +DK + P + IF+ IKS Sbjct: 288 GYIEVKTPVLVDKSLWEASGHWAKFRCDMFTL-ETDDKTLALKPMNCPCHVQIFKQGIKS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + L R+E G+MR R + DA+ F + + + + Sbjct: 347 YRDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETV-RFCKLLTE 405 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G I ++ + E D + T + Sbjct: 406 VYKDFGFTDIKVKFSDRSEICAGNDE-----------------VWDKAENALKTAIEKAG 448 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + ++ A Y + L D++ + ++ F + + A + Sbjct: 449 FIYTLNPGEAAFYGPKIEF---VLTDAIGRQWQCGTLQMD----FVLPER----LDANYI 497 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 A G+ + +G++ ++ + GK IW V ++ N Sbjct: 498 AASGEKKRPVMLHRAILGSLERFIGILIEEYAGKFPIWLAPVQVAIATITN------DLN 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D ++ L G + ++I + P+ ++G + ++ +V I+ Sbjct: 552 DYALEVQKTLIDNGVRTDINISPDKINYKIREFSNQKIPIIAVIGKQEQANKQVTIRKLG 611 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 T +E +S+E++I SN Sbjct: 612 TIEQEILSIEQLIAMIKKENSNY 634 >gi|32035109|ref|ZP_00135161.1| COG0442: Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209292|ref|YP_001054517.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20] gi|166980093|sp|A3N3C6|SYP_ACTP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|126098084|gb|ABN74912.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 571 Score = 240 bits (611), Expect = 5e-61, Method: Composition-based stats. Identities = 130/284 (45%), Positives = 169/284 (59%), Gaps = 19/284 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHVDKASLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y IF RLGL ++A++G IGG SHEF VLA +GE V DF E Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDFAANIELAEAV 239 Query: 236 -------------NTDFDDIISLNSIVEQWTAPYAATSDVHNEK 266 D + ++N +VEQ+ P T K Sbjct: 240 AVGERQAPTAEMQLVDTPNAKTINELVEQFNLPIGKTVKTLIVK 283 Score = 180 bits (456), Expect = 5e-43, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 112/207 (54%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPM 298 D ++ + A +D+ N D P+ K V RGIEVGHIF GTKYS M Sbjct: 364 DGKHYFNVNWERDAAMPEVADLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 AT +G DGK + MG YGIG RVVAA IE HD + I D +APF ++++ + Sbjct: 424 KATVQGEDGKPLVMTMGCYGIGVTRVVAAAIEQHHDERGIIWPSDEIAPFTVAIVPMNMH 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + E++Y L G DV +DD E+ G FA +L+G P V++G K +++ ++ Sbjct: 484 KSESVQQFSEELYRTLKAQGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K+R TG ++ ++ ++++ + Sbjct: 544 EYKNRRTGEKQMIAKDQLLAFLKENVK 570 >gi|27468275|ref|NP_764912.1| threonyl-tRNA synthetase 1 [Staphylococcus epidermidis ATCC 12228] gi|293366369|ref|ZP_06613048.1| threonine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|38258358|sp|Q8CS74|SYT_STAES RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|27315821|gb|AAO04956.1|AE016748_190 threonyl-tRNA synthetase 1 [Staphylococcus epidermidis ATCC 12228] gi|291319494|gb|EFE59861.1| threonine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|329733742|gb|EGG70068.1| threonine--tRNA ligase [Staphylococcus epidermidis VCU045] gi|329737259|gb|EGG73513.1| threonine--tRNA ligase [Staphylococcus epidermidis VCU028] Length = 645 Score = 240 bits (611), Expect = 5e-61, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 150/444 (33%), Gaps = 31/444 (6%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD L L T G+ WLP G + I +++ Sbjct: 229 KAHLKMLEERRERDHRKIGKDLELFTNN-QLVGAGLPLWLPNGATIRREIERYIVDKEVS 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHI 122 G + P L + DL+ SG +D Y ++M ++ M+ P + I+++ Sbjct: 288 MGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPAMKLDEDEAMVLRPMNCPHHMMIYKNKP 347 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ R E ++ + + + P+ K + ++ Sbjct: 348 HSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQ 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G + R + D E + D++ Sbjct: 408 DVYKDFGFEDYRFRLS-----YRDPEDKHKYFDDDEM--------WEKAESMLKEASDEL 454 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y DV ++ ++ + + +S ++ F ++ T+ Sbjct: 455 GLTYEEAIGEAAFYGPKLDV---QVKTAMGKEETLSTAQLD----FLLPERFD----LTY 503 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG+ H + G+ + + + +I +NI H Sbjct: 504 IGQDGEQHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPMQVEIIPVNIDLH----Y 559 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D + L G V DD E++G + A + P Q++VG + V +V ++ Sbjct: 560 DYARLLQDELKSQGVRVEIDDRNEKMGYKIREAQMKKIPYQIVVGDQEVEHQEVNVRKYG 619 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 + +E + +E I + Sbjct: 620 SEKQESVEKDEFIWNVIDEIRLKK 643 >gi|255035014|ref|YP_003085635.1| threonyl-tRNA synthetase [Dyadobacter fermentans DSM 18053] gi|254947770|gb|ACT92470.1| threonyl-tRNA synthetase [Dyadobacter fermentans DSM 18053] Length = 647 Score = 240 bits (611), Expect = 5e-61, Method: Composition-based stats. Identities = 87/437 (19%), Positives = 168/437 (38%), Gaps = 38/437 (8%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD +L L + +G+ WLP G + + A + + Q+R G + + Sbjct: 240 MEEAKKRDHRRLGKELELFA-FSEKVGQGLPLWLPKGAMLRERLQAFLSKAQSRAGYVPV 298 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 P + S DL+V SG +D YGK+ + D+ + P + +I+++ +SY++ Sbjct: 299 ITPHIGSKDLYVTSGHWDKYGKDSFQPIKTPNLDEEYMLKPMNCPHHCEIYKTSPRSYKD 358 Query: 128 LPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP F + +R E G+ R R F DA+ F P+ K + ++ L +F Sbjct: 359 LPLRFSEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCR-PDQVKEEFIRVIDLVLYVFK 417 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 LG + D + + KD S + L+ Sbjct: 418 SLGFNDYSAQISLR--------------DPNNKEKYIGKDEDWEKAESAIIEAAAERGLS 463 Query: 247 SIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 ++ E A Y D + D+L ++ ++ ++ + G+ Sbjct: 464 TVTELGEAAFYGPKLDFM---VRDALGRKWQLGTIQVDY----QLPQRF----QLEYTGS 512 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 D + H + G+M A++ + G+ +W I I + D Sbjct: 513 DNQKHRPVMIHRAPFGSMERFTAILIENTAGQFPLW------LSPDQIAILPISEKFADY 566 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E+++ +L F D E+IG + A++ P +IVG K ++ K+ ++ + G Sbjct: 567 AEEVFFQLQDHDIRGFVDHRDEKIGRKIRDAEVTKVPFMLIVGEKEAAEGKLSVRRKGEG 626 Query: 425 IREDMSLEEVINYASHR 441 M++EE + Sbjct: 627 DLGSMTIEEFAAFFKKE 643 >gi|52308170|gb|AAU38670.1| ProS protein [Mannheimia succiniciproducens MBEL55E] Length = 589 Score = 240 bits (611), Expect = 5e-61, Method: Composition-based stats. Identities = 123/243 (50%), Positives = 163/243 (67%), Gaps = 1/243 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L+ V IIREE Sbjct: 19 MRTSKYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPSGIRVLEKVKNIIREE 78 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GAIE+ +P +Q A+LW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 79 MNKSGAIEVLMPVVQPAELWQESGRWEQYGLELLRFNDRGNRDFVLGPTHEEVITDLVRR 138 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ + Sbjct: 139 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTKESLQATYDVMYQT 198 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V D+ E + Sbjct: 199 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDYAANIELAEAI 257 Query: 241 DII 243 + Sbjct: 258 AVG 260 Score = 176 bits (447), Expect = 5e-42, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 112/207 (54%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D +I + +D+ N D P+ K + RGIEVGHIF G KYS M Sbjct: 382 DGKHYFNINWERDVALPKIADLRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGQKYSEAM 441 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 +AT +G DGK + MG YGIG RVVA+ IE HD + I D++APF ++++ + Sbjct: 442 NATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQHHDERGIIWPSDAIAPFTVAIVPMNMH 501 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + E++Y L G +V +DD E+ G FA +L+G P VI+G K + + ++ Sbjct: 502 KSESVQAYAEELYQTLLAQGVEVIFDDRKERPGVMFADMELIGVPHMVIIGEKNLENGEI 561 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K+R T ++ ++ ++++++ + Sbjct: 562 EYKNRRTSEKQMIAKDQLLDFLKANVN 588 >gi|42523121|ref|NP_968501.1| hypothetical protein Bd1617 [Bdellovibrio bacteriovorus HD100] gi|73919772|sp|Q6MML0|SYT_BDEBA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|39575326|emb|CAE79494.1| thrS [Bdellovibrio bacteriovorus HD100] Length = 656 Score = 240 bits (611), Expect = 5e-61, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 148/442 (33%), Gaps = 38/442 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y I + RD +L + ++ + G + G +++ +RE T Sbjct: 239 TYLHNIEEAKKRDHRKLGKELGMF--YFNELAPGSPFFTGKGATVYNSLQTYLRELYFET 296 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + +L+ SG Y +Y + M +++ P + ++ S S Sbjct: 297 GYQEVITPQIFDVNLFHTSGHYQNYKENMF-FTKVDERDFASKPMNCPSHCLLYNSEKYS 355 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP R E G+ R R F DA+ F + + K R Sbjct: 356 YRDLPIKMADFGRLHRYEKSGAMHGLTRVRTFCQDDAHIFCRMDQLQEE-IAKFMNLLNR 414 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ +LG+ + + + P S E+ D + + Sbjct: 415 VYDKLGMGNYKIFLSTRPDNRMGSEEY-----------------WDMAEGALAEALKSLN 457 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y D+ D+L ++ ++ F + Sbjct: 458 LPFELNPGDGAFYGPKLDIMFV---DALNRPWQLGTLQVDPNLPQAFD--------LKYT 506 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 G D K+H M I I + P + P +++++N+ Sbjct: 507 GEDNKEHRPVMLHRAILGSLER--FIGVYLEHTAGHLPPWMMPVQVAILNVTDR---VNS 561 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 CE++ L V +D E++ + A L P +IVG K V ++ R Sbjct: 562 FCEELQNSLKGHSVRVEFDRRNEKLNYKIREAQLQKIPYMIIVGDKEAESRTVSLRLRDG 621 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + +++++V+N + Sbjct: 622 SEHKGLTVDQVMNLITTDIKTR 643 >gi|17987198|ref|NP_539832.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|256044731|ref|ZP_05447635.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|260564073|ref|ZP_05834559.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|265991152|ref|ZP_06103709.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|22654120|sp|Q8YH89|SYT_BRUME RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|17982868|gb|AAL52096.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|260154089|gb|EEW89181.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|263001936|gb|EEZ14511.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] Length = 658 Score = 240 bits (611), Expect = 5e-61, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 152/445 (34%), Gaps = 40/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD ++ L + G+ W G K N+ + +R + Sbjct: 233 QAYLHMLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 291 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F + + Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLQIN 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G + I ++ + P S E A++ V E Sbjct: 411 -DLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVL------------EQI 457 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I+ A Y + L D++ + ++ FG Sbjct: 458 RQQSNNIKTGILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------ 508 Query: 298 MSATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G K V + G+M ++ + G +W V ++ Sbjct: 509 --AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATIT---- 562 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + ++ A+L G V D E+I + L P+ ++ G + + V Sbjct: 563 --SDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHSLQKVPVILVCGKREAEEKTV 620 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + +E M+L+E I Sbjct: 621 NMRRLGSRDQESMTLDEAIARLCEE 645 >gi|86143057|ref|ZP_01061479.1| threonyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217] gi|85830502|gb|EAQ48961.1| threonyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217] Length = 648 Score = 240 bits (611), Expect = 6e-61, Method: Composition-based stats. Identities = 80/437 (18%), Positives = 150/437 (34%), Gaps = 40/437 (9%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L T + +G+ WLP G + + ++ Q + G + P Sbjct: 238 AKKRDHRKLGKELQLFT-FSQKVGQGLPLWLPKGAALRERLENFLKAAQKKAGYEMVVSP 296 Query: 73 TLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 + +L+V SG Y YG++ + + + P + +IF + SYR+LP Sbjct: 297 HIGQKELYVTSGHYAKYGEDSFQPITTPAEGEEFLLKPMNCPHHCEIFNATQWSYRDLPK 356 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F + +R E G+ R R F DA+ F TP+ + K+ L +F LG Sbjct: 357 RFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFC-TPDQLDDEFMKVIDLVLYVFGSLG 415 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 ++ + D + + D + + LN +V Sbjct: 416 FENFTAQVSLR--------------DPENKEKYIGTDENWAKAENAIINAAKAKGLNYVV 461 Query: 250 E-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTKYSLPMSATFKGAD 306 E A Y D + D+L + ++ ++ F K S Sbjct: 462 ETGEAAFYGPKLDFM---VKDALGRSWQLGTIQVDYNLPERFELAYKGSDNE-------- 510 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + V + G+M A++ G +W ++L + + + Sbjct: 511 -EHRPVMIHRAPFGSMERFVAILLEHTGGNFPLWLMPEQATVLTL------SENYENYAQ 563 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + L DD GE +G + A++ P +I+G K +D V ++ Sbjct: 564 NVLTLLENHDVRATIDDRGETMGRKIREAEMQKTPYMLIIGEKEANDGTVSVRKHGGEDL 623 Query: 427 EDMSLEEVINYASHRFS 443 M++ + + Sbjct: 624 GTMTVADFAKIIEAEIA 640 >gi|62289987|ref|YP_221780.1| threonyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941] gi|82699915|ref|YP_414489.1| threonyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308] gi|189024229|ref|YP_001934997.1| threonyl-tRNA synthetase [Brucella abortus S19] gi|254689295|ref|ZP_05152549.1| threonyl-tRNA synthetase [Brucella abortus bv. 6 str. 870] gi|254697431|ref|ZP_05159259.1| threonyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|254730329|ref|ZP_05188907.1| threonyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] gi|256257545|ref|ZP_05463081.1| threonyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] gi|260545263|ref|ZP_05821004.1| threonyl-tRNA synthetase [Brucella abortus NCTC 8038] gi|260883825|ref|ZP_05895439.1| threonyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] gi|73919775|sp|Q57D65|SYT_BRUAB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123740930|sp|Q2YQ07|SYT_BRUA2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238689368|sp|B2S5S6|SYT_BRUA1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|62196119|gb|AAX74419.1| ThrS, threonyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941] gi|82616016|emb|CAJ11049.1| tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase, class IIa:Threonyl-tRNA synthetase, class IIa:TGS domain:A [Brucella melitensis biovar Abortus 2308] gi|189019801|gb|ACD72523.1| threonyl-tRNA synthetase [Brucella abortus S19] gi|260096670|gb|EEW80545.1| threonyl-tRNA synthetase [Brucella abortus NCTC 8038] gi|260873353|gb|EEX80422.1| threonyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] Length = 658 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 153/445 (34%), Gaps = 40/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD ++ L + G+ W G K N+ + +R + Sbjct: 233 QAYLHMLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 291 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F + + + Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLHIN 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G + I ++ + P S E A++ V E Sbjct: 411 -DLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVL------------EQI 457 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I+ A Y + L D++ + ++ FG Sbjct: 458 RQQSNNIKTGILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------ 508 Query: 298 MSATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G K V + G+M ++ + G +W V ++ Sbjct: 509 --AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATIT---- 562 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + ++ A+L G V D E+I + L P+ ++ G + + V Sbjct: 563 --SDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHSLQKVPVILVCGKREAEEKTV 620 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + +E M+L+E I Sbjct: 621 NMRRLGSRDQESMTLDEAIARLCEE 645 >gi|254693779|ref|ZP_05155607.1| threonyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya] gi|261214058|ref|ZP_05928339.1| threonine-tRNA ligase [Brucella abortus bv. 3 str. Tulya] gi|260915665|gb|EEX82526.1| threonine-tRNA ligase [Brucella abortus bv. 3 str. Tulya] Length = 658 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 153/445 (34%), Gaps = 40/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD ++ L + G+ W G K N+ + +R + Sbjct: 233 QAYLHMLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 291 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F + + + Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLHIN 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G + I ++ + P S E A++ V E Sbjct: 411 -DLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVL------------EQI 457 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I+ A Y + L D++ + ++ FG Sbjct: 458 RQQSNNIKTGILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------ 508 Query: 298 MSATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G K V + G+M ++ + G +W V ++ Sbjct: 509 --AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATIT---- 562 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + ++ A+L G V D E+I + L P+ ++ G + + V Sbjct: 563 --SDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHSLQKVPVILVCGKREAEEKTV 620 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + +E M+L+E I Sbjct: 621 NMRRLGSRDQESMTLDEAIARLCEE 645 >gi|264679166|ref|YP_003279073.1| threonyl-tRNA synthetase [Comamonas testosteroni CNB-2] gi|262209679|gb|ACY33777.1| threonyl-tRNA synthetase [Comamonas testosteroni CNB-2] Length = 687 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 82/442 (18%), Positives = 140/442 (31%), Gaps = 36/442 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L I +HS G W P G V +R G Sbjct: 279 YLFRLEEAEKRDHRKLGRELDLF--HIDEHSPGTVFWHPKGWAVWQQVEQYMRRVYQDNG 336 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D Y + M D + P + IF+ IKSY Sbjct: 337 YQEVKAPQILDKGLWEKTGHWDKYRENMFT-TDSEKREYALKPMNCPGHIIIFKQGIKSY 395 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F + R+E G+MR R F D + F T + + ++ Sbjct: 396 RDLPLRFGEFGNCHRNEPTGSLHGIMRVRAFTQDDGHIFC-TEDQIQAEVTAFTSLLQKV 454 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G +I R + P + E D + Sbjct: 455 YADFGFTNILYRLSTRPEKRIGTDE-----------------AWDKAENALAEGLRASGC 497 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D+L + ++ + A F G Sbjct: 498 EFEYLPGEGAFYGPKIEY---TLKDALGREWQCGTIQVDPNMP--------ERLDAEFVG 546 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + +G++ ++ H G W L A ++ Sbjct: 547 EDGERHRPIMLHRAILGSLERFIGILVEHHSGALPAWL--APVQAAVLNITDAQADYAQE 604 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +K+ L V D E+I + + P ++ G K + V ++ R Sbjct: 605 VAQKLQKALPNQSLRVVTDLRNEKITYKIREHSMQKLPYILVAGDKEKAAGAVAVRARGN 664 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MS++ I + + Sbjct: 665 KDLGVMSVDAFIELLAKDIAAK 686 >gi|218885229|ref|YP_002434550.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226699140|sp|B8DNM5|SYP_DESVM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|218756183|gb|ACL07082.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 575 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 132/279 (47%), Positives = 175/279 (62%), Gaps = 2/279 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S ++P L+E P DAE+ SHKL+ R GMI + + GIY ++PLG KA++ AI+REE Sbjct: 1 MRWSNCYIPTLKEAPADAEVVSHKLLTRAGMIRKLTSGIYIYMPLGLKAIEKTAAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+S+P +Q ADLW ESGR++ YGKE+LR DRN + GPTHEEV+TD+ R Sbjct: 61 MNRAGALELSMPMVQPADLWQESGRWEFYGKELLRFQDRNGRDYCLGPTHEEVITDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD G+ SY M+ + Sbjct: 121 EVRSYRQLPINLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFDRDEAGADKSYWAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP--IPSENTD 238 Y +F RLGL+ + A+SG IGG SHEF+VLADTGE + +E Sbjct: 181 YQNVFKRLGLRFRAVEADSGSIGGSFSHEFMVLADTGEDTIAACTGCQYAANVERAEVAP 240 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV 277 +L ++ P V F +P++ V Sbjct: 241 PAVPATLPAVGAIEEVPTPGKHTVEEVCAFLGVPQSALV 279 Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 73/189 (38%), Positives = 101/189 (53%), Gaps = 2/189 (1%) Query: 253 TAPYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A +D+ D+ P + RGIEVGH+F GTKYS P+ TF DGK+ Sbjct: 375 DAKIERYADLRVITPADACPRCGQPIELTRGIEVGHVFKLGTKYSEPLKCTFLDEDGKEK 434 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + MG YGIG RVVA+ IE +HD GI++P +APF+ L + + E+ YA Sbjct: 435 VMVMGCYGIGVSRVVASCIEQNHDADGIVFPPPIAPFEAVLCCLDPKNGETLGKAEEFYA 494 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L G DV DD E+ G +F ADL+G PLQ++VG K ++ VE K R TG + ++ Sbjct: 495 ELKAQGVDVILDDRDERPGVKFKDADLVGMPLQLVVGGKGLARGIVEAKDRRTGEKTELP 554 Query: 431 LEEVINYAS 439 +E Sbjct: 555 VEGFAEAFR 563 >gi|150024985|ref|YP_001295811.1| threonine--tRNA ligase [Flavobacterium psychrophilum JIP02/86] gi|166223340|sp|A6GY22|SYT_FLAPJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|149771526|emb|CAL42995.1| Threonine--tRNA ligase [Flavobacterium psychrophilum JIP02/86] Length = 648 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 82/446 (18%), Positives = 159/446 (35%), Gaps = 41/446 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E R D +L L + +G+ WLP G D + +++ Q + G Sbjct: 229 YLELLEEAKRRDHRKLGKELELFA-FSQKVGQGLPLWLPKGAALRDRLEQFLKKAQKKGG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIK 123 ++ P + +L+V SG Y YG + + + + P + +I+ Sbjct: 288 YEQVVTPHIGQKELYVTSGHYAKYGADSFQPISTPTEGEEFLLKPMNCPHHCEIYNVRPW 347 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP + + +R E G+ R R F DA+ F TP+ + K+ L Sbjct: 348 SYKDLPKRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFC-TPDQLDEEFKKVIDLVL 406 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +F LG ++ + D + D + + Sbjct: 407 YVFGSLGFENFTAQISLR--------------DKENRDKYIGSDENWEKAENAIINAARD 452 Query: 243 ISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 +LN++VE A Y D + D+L + ++ ++ T Sbjct: 453 KNLNTVVEYGEAAFYGPKLDFM---VKDALGRSWQLGTIQVDYNLP--------ERFELT 501 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +KG+D + H + G+M A++ G +W + L Sbjct: 502 YKGSDDQLHRPVMIHRAPFGSMERFIAILLEHTAGNFPLWLMPEQAIILCL------SDK 555 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 +K+ L D+ E IG + A++ P +IVG + ++ + I+ Sbjct: 556 YEIYAKKVLNLLENHEIRALIDNRNESIGRKIRDAEMQKTPFMLIVGEEEEKNNTISIRR 615 Query: 421 RLTGIRE--DMSLEEVINYASHRFSN 444 + +++EE + S Sbjct: 616 HGQEGKGNITVTIEEFARIVNDEISK 641 >gi|312794183|ref|YP_004027106.1| prolyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181323|gb|ADQ41493.1| prolyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 572 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 122/265 (46%), Positives = 162/265 (61%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F+P L+E P DAEI SHKLMLR+G + Q S GIY +LPLG + L + I+REE Sbjct: 1 MKVSELFMPTLKETPSDAEIESHKLMLRSGFMRQLSSGIYVYLPLGYRVLRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ + L +LW ESGR+ +G EM R+ DRN++ GPTHEE T I R+ Sbjct: 61 MDRSGAQEVHMSALMPKELWEESGRWAVFGPEMFRIKDRNEREYCLGPTHEEAFTYIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR+LP YQIQ KFRDE RPRFGVMR REF MKDAYSFD+ +G SY KM+ + Sbjct: 121 EITSYRDLPKILYQIQTKFRDERRPRFGVMRCREFTMKDAYSFDIDEKGLDISYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+RIF R GL + A++G +GG SHEF+V + GE ++ K + D Sbjct: 181 YVRIFKRCGLDVKIVEADTGAMGGASSHEFMVPSSVGEAEIAYCKSCGYAANLEKAECLD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 + N +++ Y E Sbjct: 241 TPVENNEELKEKQEVYTPNVRTIEE 265 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 70/194 (36%), Positives = 106/194 (54%), Gaps = 4/194 (2%) Query: 256 YAATSDVHNEKLFDSLPEN---KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 +D+ N D P+ K RGIEVGHIF GTKY+ + + G+ + Sbjct: 375 VTKFADLRNITQDDLCPKCRSQKVTIERGIEVGHIFKLGTKYTQAFNCVYTDEKGEKKLM 434 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R AA+IE HD GIIWP +VAP+++ ++ + +D+ +IY +L Sbjct: 435 IMGCYGIGINRTAAAIIEQMHDEDGIIWPITVAPYEVIVVPVNVNDENQNKIAFEIYEKL 494 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 K G +V DD E+ G +F ADL+G P +V VG K VS+ K+EI++R T ++ +E Sbjct: 495 QKNGVEVLIDDRDERAGVKFKDADLIGIPFRVTVGKK-VSEGKLEIRNRRTKESFEVEIE 553 Query: 433 EVINYASHRFSNNR 446 + I + + + Sbjct: 554 KAIEFVINLIKEEK 567 >gi|254462954|ref|ZP_05076370.1| threonyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083] gi|206679543|gb|EDZ44030.1| threonyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083] Length = 643 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 75/435 (17%), Positives = 150/435 (34%), Gaps = 39/435 (8%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD ++ L + + G W P G + + A +R Q+ G Sbjct: 237 LTFLEEAAKRDHRKLGREMGLF--HFEEVAPGSVIWHPNGWRVFQTLIAYMRRRQDVAGY 294 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 +E++ P + LW SG + +Y + M ++D+ P + ++ ++SYR Sbjct: 295 VEVNTPDIMDRALWETSGHWFNYKENMFLAQTQDDRDYALKPMNCPGHMMVYNHSLRSYR 354 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R E G++R R F DA+ + + + L I+ Sbjct: 355 DLPVKIAEFGKVHRYEPSGALHGLLRVRSFTQDDAHIYCSPEQLTDECLKVN-DLILSIY 413 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G + + ++ + P S E D + T + Sbjct: 414 KDFGFEDVHVKLSTRPENRIGSDE-----------------SWDLSEGALKTALERAGMS 456 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 +I E A Y + L D++ + + ++ FG+ T+ A Sbjct: 457 YTIFEGEGAFYGPKLEY---VLRDAIGRDWQCGTLQVDYNLPERFGS--------TYVSA 505 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 G+ V + G++ ++ + +GK W S+I D Sbjct: 506 SGEKLAPVMLHRALFGSLERFIGILIENWEGKLPFWLAPRQVVVASII------SDADDY 559 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + L G D E+I + + P+ + +G++ V + V ++ Sbjct: 560 VYEAVDALKAAGVQAEADIRNEKINYKVREHSVGKVPVILAIGAREVEERTVTVRRLGEK 619 Query: 425 IREDMSLEEVINYAS 439 + +LE VI+ S Sbjct: 620 QTKVEALESVISALS 634 >gi|260754807|ref|ZP_05867155.1| threonine-tRNA ligase [Brucella abortus bv. 6 str. 870] gi|260758029|ref|ZP_05870377.1| threonine-tRNA ligase [Brucella abortus bv. 4 str. 292] gi|260761852|ref|ZP_05874195.1| threonine-tRNA ligase [Brucella abortus bv. 2 str. 86/8/59] gi|297248387|ref|ZP_06932105.1| threonyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196] gi|260668347|gb|EEX55287.1| threonine-tRNA ligase [Brucella abortus bv. 4 str. 292] gi|260672284|gb|EEX59105.1| threonine-tRNA ligase [Brucella abortus bv. 2 str. 86/8/59] gi|260674915|gb|EEX61736.1| threonine-tRNA ligase [Brucella abortus bv. 6 str. 870] gi|297175556|gb|EFH34903.1| threonyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196] Length = 660 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 153/445 (34%), Gaps = 40/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD ++ L + G+ W G K N+ + +R + Sbjct: 235 QAYLHMLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 292 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 293 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 352 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F + + + Sbjct: 353 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLHIN 412 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G + I ++ + P S E A++ V E Sbjct: 413 -DLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVL------------EQI 459 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I+ A Y + L D++ + ++ FG Sbjct: 460 RQQSNNIKTGILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------ 510 Query: 298 MSATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G K V + G+M ++ + G +W V ++ Sbjct: 511 --AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATIT---- 564 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + ++ A+L G V D E+I + L P+ ++ G + + V Sbjct: 565 --SDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHSLQKVPVILVCGKREAEEKTV 622 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + +E M+L+E I Sbjct: 623 NMRRLGSRDQESMTLDEAIARLCEE 647 >gi|329115645|ref|ZP_08244367.1| Threonyl-tRNA synthetase [Acetobacter pomorum DM001] gi|326695073|gb|EGE46792.1| Threonyl-tRNA synthetase [Acetobacter pomorum DM001] Length = 645 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 79/438 (18%), Positives = 150/438 (34%), Gaps = 41/438 (9%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E RD ++ L + + G W G + + +R Q R G Sbjct: 235 LHQLEEAEKRDHRRIGKEMGLF--HFQEEAVGQVFWHAKGWRLYTALQDYMRRAQTRHGY 292 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L LW SG +D Y M + +K + P + IFR ++SY Sbjct: 293 QEVRTPQLVDRALWEASGHWDKYRHHMFIATVEDENKTLALKPMNCPCHVQIFRHGLRSY 352 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R E G+MR R F DA+ F + + + + + Sbjct: 353 RELPLRMAEFGACHRYEPSGALHGLMRVRGFTQDDAHIFCTEDQIADETV-RFVKMLHDV 411 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + LG + + ++ P S E D + Sbjct: 412 YQDLGFEHVRVKFADRPEQRAGSDE-----------------VWDKAENALKEACTVAGV 454 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D++ + + +++ + A++ G Sbjct: 455 EYEHNPGEGAFYGPKLEF---VLRDAIGRDWQCGTLQVDLVLP--------ERLDASYIG 503 Query: 305 AD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D G+ V + +G+ ++ H G+ +W V S++ Sbjct: 504 EDSGRHRPVMLHRAILGSFERFLGILIEQHAGRFPLWLAPVQVVVASIV------SDAAP 557 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E++ A L + G V D ++I ++ + P+ ++VG + + V ++ T Sbjct: 558 YAEEVAAALREAGLAVEADVRNDKINAKVREHSVARVPVILVVGRREAEERTVAMRRLGT 617 Query: 424 GIREDMSLEEVINYASHR 441 +E +SL + + + Sbjct: 618 QAQETLSLNDAVARLKNE 635 >gi|146276901|ref|YP_001167060.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025] gi|166225490|sp|A4WQU1|SYT_RHOS5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|145555142|gb|ABP69755.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodobacter sphaeroides ATCC 17025] Length = 646 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 78/443 (17%), Positives = 149/443 (33%), Gaps = 45/443 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD ++ L + + + G+ W P G + + +R + Sbjct: 234 KAYLHMLEEAAKRDHRKLGKEMELF--HLQEEAPGMVFWHPNGWQIYRTLEDYMRGRLRK 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-----MIYGPTHEEVMTDIF 118 G E+ P + LW SG +++Y + M + + A P + ++ Sbjct: 292 AGYKEIRTPQVVDRKLWEASGHWEAYKENMFLVEVEEEHAKEKRINALKPMNCPCHVQVY 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F+ DA+ F T + + Sbjct: 352 NQGLKSYRDLPLRLAEFGSCHRYESSGSMHGLMRVRGFVQDDAHIFC-TEDQIEGECAAF 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 ++ LG S ++ + P S E +T + Sbjct: 411 IELLSSVYKDLGFDSFEIKLSTRPEVRIGSDEAWDKVET-----------------ALEN 453 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + + I A Y D KL D++ + ++ G Sbjct: 454 AIKKVGAAYEIDPGEGAFYGPKLDF---KLTDAIGRKWQCGTFQVDPNLPTRLG------ 504 Query: 298 MSATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G DG H + +G+ ++ ++ GK W S++ Sbjct: 505 --AEYIGEDGAKHRPYMLHRAILGSFERFIGILIENYAGKLPFWLAPRQVVVASIV---- 558 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 ++ A L G D E+I + + P+ + +G + V V Sbjct: 559 --SDADPYVAEVVAALRARGVRAEADTRNEKINYKVREHSVGKVPVILAIGMQEVEGRTV 616 Query: 417 EIKHRLTGIREDMSLEEVINYAS 439 ++ E L++V+ + Sbjct: 617 SVRRLGETGTESAPLDQVVERLA 639 >gi|312128280|ref|YP_003993154.1| prolyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108] gi|311778299|gb|ADQ07785.1| prolyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108] Length = 572 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 122/265 (46%), Positives = 163/265 (61%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F+P L+E P DAEI SHKLMLR+G + Q S GIY +LPLG + L + I+REE Sbjct: 1 MKVSELFMPTLKETPSDAEIESHKLMLRSGFMRQLSSGIYVYLPLGYRVLRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ + L +LW ESGR+ +G EM R+ DRN++ GPTHEE T I R+ Sbjct: 61 MDRSGAQEVHMSALMPKELWEESGRWAVFGPEMFRIKDRNEREYCLGPTHEEAFTYIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR+LP YQIQ KFRDE RPRFGVMR REF MKDAYSFD+ +G SY KM+ + Sbjct: 121 EISSYRDLPKILYQIQTKFRDERRPRFGVMRCREFTMKDAYSFDIDEKGLDISYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+RIF R GL + A++G +GG SHEF+V + GE ++ K + D Sbjct: 181 YVRIFKRCGLDVKIVEADTGAMGGASSHEFMVPSSVGEAEIAYCKACGYAANLEKAECLD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 + + N +++ Y E Sbjct: 241 EPVENNEELKEKQEVYTPNVRTIEE 265 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 69/194 (35%), Positives = 104/194 (53%), Gaps = 4/194 (2%) Query: 256 YAATSDVHNEKLFDSLPEN---KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 +D+ N D P+ K RGIEVGHIF GTKY+ + + G+ + Sbjct: 375 VTKFADLRNITQDDLCPKCRSQKVTIERGIEVGHIFKLGTKYTQAFNCVYTDEKGEKKLM 434 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R AA+IE HD GIIWP +VAP+++ ++ + D+ +IY L Sbjct: 435 IMGCYGIGINRTAAAIIEQMHDEDGIIWPITVAPYEVIVVPVNVKDENQNKIAFEIYENL 494 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 K G +V DD E+ G +F ADL+G P +V VG K +S+ K+EI++R T ++ +E Sbjct: 495 QKNGVEVLIDDRDERAGVKFKDADLIGIPFRVTVGKK-ISEGKLEIRNRRTKESFEVEIE 553 Query: 433 EVINYASHRFSNNR 446 + I + + + Sbjct: 554 KAIEFVMNLIKEEK 567 >gi|85858497|ref|YP_460699.1| threonyl-tRNA synthetase [Syntrophus aciditrophicus SB] gi|85721588|gb|ABC76531.1| threonyl-tRNA synthetase [Syntrophus aciditrophicus SB] Length = 645 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 79/438 (18%), Positives = 154/438 (35%), Gaps = 41/438 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L IL+E RD L L + G+ + P G + ++E R G Sbjct: 241 YLKILEEAKKRDHRKLGKDLDLFQV-SEEAGAGLIIFHPKGTILRTIIEDWEKKEHLRRG 299 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + DLW +SG +D Y + M + ++ P + I+++ I+SY Sbjct: 300 YDMVMGPQILKVDLWKKSGHFDHYRENM-YFTEVEGQSYGIKPMNCLSHMLIYKTKIRSY 358 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++++ R E G++R+R+F DA+ + + + ++ Sbjct: 359 RDLPIRYFELGTVHRHEKTGVLHGLLRARQFTQDDAHILCTPEQLNSE--IRAIADFVGY 416 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 ++ + + P S + + D Sbjct: 417 AMKIFGFEYEVELSTRPDNS-----------------IGSDQDWELATSALENALKDNQM 459 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D KL D+L + + + F ++ T+ G Sbjct: 460 TYDINEGDGAFYGPKIDF---KLKDALKRKWQCATIQCD----FTLPERFD----LTYVG 508 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + +GA+ V+ + G +W V +S+ Sbjct: 509 ADGEKHRPVMLHRVILGAIERFMGVLIEHYGGAFPVWLAPVQAILLSVT------DRHIP 562 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + +Y +L G V D E++G + A P +++G K ++ +V ++ R Sbjct: 563 YGKTVYQQLMDAGIRVEGDFRNEKLGYKIREAQTQKIPYMLVIGDKEMASGEVAVRQRGG 622 Query: 424 GIREDMSLEEVINYASHR 441 + + I + Sbjct: 623 DNLGTLPVSAFIELVKEK 640 >gi|223984594|ref|ZP_03634721.1| hypothetical protein HOLDEFILI_02017 [Holdemania filiformis DSM 12042] gi|223963441|gb|EEF67826.1| hypothetical protein HOLDEFILI_02017 [Holdemania filiformis DSM 12042] Length = 590 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 151/443 (34%), Gaps = 39/443 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y + + RD + +L L M+ ++ G +LP G + + EE + Sbjct: 182 NYLNFLEEAKKRDHKKLGRELDLF--MMSEYGPGFPFFLPNGMILRNVLENYWYEEHTKE 239 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + S DLW SG + +Y M +D+ P + ++++ + S Sbjct: 240 GYQFIKTPIMLSKDLWELSGHWANYQDNMYTTM-IDDREFAIKPMNCPGGILVYKNGLHS 298 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 Y++LP ++ R E G+ R R F DA+ F + ++ R Sbjct: 299 YKDLPLRIGELGQVHRHEASGALNGLFRVRTFTQDDAHIFMREDQIESE-VVRLINFIDR 357 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ GL + P E + S + D + Sbjct: 358 VYSVFGLSYEI-ELSTRP----------------EKKYIGSIEIWDKAEAALEAACHAAG 400 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I A Y D H L DSL + +++ T+ Sbjct: 401 KACKINPGDGAFYGPKLDFH---LTDSLGRVWQCGTIQLDMNLP--------ERFDLTYV 449 Query: 304 GADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 ADG K + + G++ ++ + G +W ++ + H + Sbjct: 450 DADGSKKRPIMLHRVIFGSIERFIGILIEHYAGAFPMWLA-----PQQVVIVPVHHERHL 504 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D +++ A L G V D E++G + A P+Q++VG V ++ ++ Sbjct: 505 DYAKELEAMLLAKGVRVKVDGRNEKLGYRVREAQTHKIPMQIVVGDGEVENNTATVRRYG 564 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 +S EE++ + Sbjct: 565 KKDSVTLSKEELLESILNEIETK 587 >gi|88798124|ref|ZP_01113711.1| prolyl-tRNA synthetase [Reinekea sp. MED297] gi|88779321|gb|EAR10509.1| prolyl-tRNA synthetase [Reinekea sp. MED297] Length = 573 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 139/389 (35%), Positives = 194/389 (49%), Gaps = 19/389 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L ++E P DA I SHKLMLR G++ + + G+Y+WLP G++ L+ + IIREE Sbjct: 1 MRASRYLLATVKETPADAVIVSHKLMLRAGLVRKLASGLYNWLPTGRRVLNKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ +PT+Q A+LW ESGR D +ML++ DR+ + +YGPTHEEV+TDI R+ Sbjct: 61 LDRSGAQEVLMPTIQPAELWEESGRIDKMEGQMLKMQDRHQRDFVYGPTHEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE RPRFGVMRSREF+MKD YSF + E Y+ M+ + Sbjct: 121 ELTSYKQLPMNFYQIQNKFRDEFRPRFGVMRSREFVMKDGYSFHVDQECLNKEYDNMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP--------- 231 Y RIF RLGL P+ A++G +GG SHEF VLAD+GE + S D Sbjct: 181 YCRIFDRLGLDYRPVLADTGAMGGSASHEFQVLADSGEDYIVYSTDSSYAANIEQAEAPM 240 Query: 232 ---------IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 D + ++ +V Q+ P T K D + + Sbjct: 241 PAGERAAPTAEMTEVDTPNAKTIEDLVSQFGLPIEKTVKTLMVKASDEVDSDLVALLIRG 300 Query: 283 EVGHIFYFGTK-YSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 + K + T + + G +G + I K + Sbjct: 301 DHELNEVKAEKLPQVAAPLTMATDEEIRAVMGAGPGSLGPVNASVPCIIDRTVSKMSDFG 360 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYA 370 NI V A E + Sbjct: 361 AGANIDGKHYFNINWERDVALPAVEDLRN 389 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 71/206 (34%), Positives = 109/206 (52%), Gaps = 5/206 (2%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D +I + A D+ N D P+ + +GIEVGHIF G YS + Sbjct: 366 DGKHYFNINWERDVALPAVEDLRNVVEGDPSPDGQGTLKILKGIEVGHIFQLGDTYSKSL 425 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 A +GK +QMG YGIG R+VAA IE +HD GIIWPD++APF + ++ + A Sbjct: 426 KAEVLDQNGKSQAMQMGCYGIGVTRIVAAAIEQNHDENGIIWPDAIAPFHVGIVPLNAHK 485 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + EK+YA L G DV DD + G +FA +L+G P +++V + ++D K Sbjct: 486 SPEVMEVAEKLYADLQAAGYDVLLDDRDKKTSPGVKFADMELVGVPHRIVVSDRGLADGK 545 Query: 416 VEIKHRLTGIREDMSLEEVINYASHR 441 VE K R +E+++L +++ + + Sbjct: 546 VEYKARRASDKEEIALTDILAHIQQQ 571 >gi|116252274|ref|YP_768112.1| threonyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841] gi|123261550|sp|Q1MGA7|SYT_RHIL3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|115256922|emb|CAK08016.1| putative threonyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841] Length = 661 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 71/441 (16%), Positives = 142/441 (32%), Gaps = 41/441 (9%) Query: 7 FLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L + RD ++ L + G+ W G + + A +R Sbjct: 234 YLHMLAEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHGKGWRVFQTLVAYMRRRL-AGD 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIFRS 120 E++ P + LW SG + Y M ++ +D+ P + IF+ Sbjct: 291 YQEVNAPQVLDKSLWETSGHWGWYRDSMFKVTVAGDDTDDDRVFALKPMNCPGHIQIFKH 350 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR LP + R E G+MR R F DA+ F + + Sbjct: 351 GLKSYRELPIRLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKIN-D 409 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L ++ G + ++ + P S E A++ V E Sbjct: 410 LILSVYKDFGFDEVTIKLSTRPDKRVGSDELWDRAESVMMGVL------------ETIQQ 457 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 I+ A Y + L D++ + ++ FG Sbjct: 458 QSNNIKTGILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG-------- 506 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + ++ + + G+M ++ + G +W + ++ Sbjct: 507 AFYIDSNSEKTQPVMIHRAICGSMERFLGILIENFAGHMPLWVSPLQVVVATIT------ 560 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 ++ L + G +V D E+I + + P+ ++ G K + V I Sbjct: 561 SEADAYGLEVAEALREAGLNVETDFRNEKINYKIREHSVTKVPVIIVCGRKEAEERTVNI 620 Query: 419 KHRLTGIREDMSLEEVINYAS 439 + + + M L+ + + Sbjct: 621 RRLGSQDQVSMGLDAAVESLA 641 >gi|329767326|ref|ZP_08258851.1| threonyl-tRNA synthetase [Gemella haemolysans M341] gi|328836015|gb|EGF85706.1| threonyl-tRNA synthetase [Gemella haemolysans M341] Length = 647 Score = 239 bits (610), Expect = 7e-61, Method: Composition-based stats. Identities = 77/446 (17%), Positives = 157/446 (35%), Gaps = 35/446 (7%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++ + + + RD +L + T + G+ WLP G + I +++ Sbjct: 228 MEQHLVRLQEARERDHRKLGKELGIFTT-SQKVGAGLPLWLPNGATIRRTIERYIVDKEV 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P + S DL++ SG +D Y ++M + + + M+ P + ++++ Sbjct: 287 ELGYDHVYTPIMGSKDLYITSGHWDHYQEDMFPPMEMDHETMVLRPMNCPHHMMVYKNER 346 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ + R E ++ + + + P+ K + Sbjct: 347 HSYRELPIRIAELGMMHRYEASGAVSGLQRVRGMTLNDAHIFVRPDQLKDEFKLTVGLIE 406 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDD 241 + LG+K+ R D T+ + D + D+ Sbjct: 407 EAYKDLGIKNFSYRLS--------------YRDPENTEKYFDDDAMWNNAQQMLKETADE 452 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y DV E ++ + + +S ++ F ++ Sbjct: 453 LGLDYVEAEGEAAFYGPKLDVQVET---AIGKQETLSTIQLD----FLLPERF----ELE 501 Query: 302 FKGADGKDHYVQMGSYGIG--AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G DGK H + GI R+VA ++E + I ++ Sbjct: 502 YIGEDGKAHRPVVIHRGIVSTMERMVAFLLEEYKGDLPTWLSPNQVRI------IPVNND 555 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++I L K G V DD E++G + A P +++G K V + V ++ Sbjct: 556 YHYDYSKEIMQELKKAGVKVAIDDRDEKLGYKIREAASKKIPYTLVIGDKEVENRNVNVR 615 Query: 420 HRLTGIREDMSLEEVINYASHRFSNN 445 + +++ S E + Sbjct: 616 TFGSHDQKEESFAEFKENILKEINER 641 >gi|213403436|ref|XP_002172490.1| threonyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275] gi|212000537|gb|EEB06197.1| threonyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275] Length = 699 Score = 239 bits (610), Expect = 7e-61, Method: Composition-based stats. Identities = 78/453 (17%), Positives = 145/453 (32%), Gaps = 35/453 (7%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+Y + + RD + L H+ S G +LP G + + + A IRE+ Sbjct: 272 MSEYKKFLAEAAKRDHRKIGREQDLF--FFHELSPGSCFFLPHGARIYNQLIAWIREQYK 329 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P + + DLW SG +++Y + M DK P + I++S Sbjct: 330 IRGFQEVITPNMYNVDLWKTSGHWNNYAENMFSFEIEKDK-FALKPMNCPGHCLIYKSRD 388 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP+ + R+E G+ R R F DA+ F + F Sbjct: 389 RSYRDLPWRCADFGVLHRNEFSGALTGLTRVRRFQQDDAHIFCRPDQVRSE-IENCFDFL 447 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G + + P E + + + D Sbjct: 448 KYVYGVFGFTF-HLELSTRP----------------EEKYLGDLETWNKAEAQLKAALDA 490 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS-LPMSA 300 + E A Y D+ +FD+L + + ++ F ++ Sbjct: 491 SGYEWELNEGDGAFYGPKIDI---TVFDALKRQHQCATIQLD----FQLPERFELEFHGT 543 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW-PDSVAPFKISLINIKAHDQ 359 T + R + +E + +++ Sbjct: 544 TEGDEAADSTNKNKYIRPVMIHRAILGSVERMIAILTEHYGGKWPFWLSPRQVSVVPVSA 603 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D K+ RL G D + + A L + +VG++ + V I+ Sbjct: 604 AAFDYANKVQKRLFDAGLFADVDTSDNTLPKKIRNAQLSQYNFIFVVGAEEEKTNSVNIR 663 Query: 420 HRLTGIRE----DMSLEEVINYASHRFSNNRPV 448 +R ++ + L+EV+ PV Sbjct: 664 NRDDPKKQAKTATVPLDEVVAKLVALKETKNPV 696 >gi|262376731|ref|ZP_06069959.1| prolyl-tRNA synthetase [Acinetobacter lwoffii SH145] gi|262308441|gb|EEY89576.1| prolyl-tRNA synthetase [Acinetobacter lwoffii SH145] Length = 572 Score = 239 bits (610), Expect = 7e-61, Method: Composition-based stats. Identities = 119/253 (47%), Positives = 169/253 (66%), Gaps = 1/253 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+Y+WLP+G + L+ V AI+REE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGVRVLNKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G++++ +P Q A LW ESGRY YG E+LR DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MDKVGSLQVYMPVTQPASLWEESGRYVQYGPELLRFNDRHGNPFVLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQ+Q KFRDE+RPRFGVMRSREF+MKDAYSF E + +Y+ M+ + Sbjct: 121 ELKSYKQLPANFYQVQTKFRDEIRPRFGVMRSREFIMKDAYSFHANQESLQQTYDDMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF RLGL P++A++G IGG SHEF VLA +GE + D+ E + Sbjct: 181 YCKIFTRLGLNFRPVQADTGSIGGSGSHEFHVLASSGEDDIAF-STESDYAANIEMAEAV 239 Query: 241 DIISLNSIVEQWT 253 + + +++ Sbjct: 240 LVGERAAPIQELK 252 Score = 169 bits (429), Expect = 7e-40, Method: Composition-based stats. Identities = 71/193 (36%), Positives = 102/193 (52%), Gaps = 3/193 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A + D+ N D P+ K RGIEVGHIF G KYS + G DGK Sbjct: 380 ERDAQFTEVYDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGQKYSEALGCKVLGEDGK 439 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEK 367 V MG YGIG RVVA+ IE + D KGIIWP ++APF+++++ + A +A E Sbjct: 440 PFTVTMGCYGIGVTRVVASAIEQNFDEKGIIWPTAIAPFEVAIVPMNAHKSPRTMEAAEA 499 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +YA L G DV DD E+ G +F+ +L G P ++++G K + E K R Sbjct: 500 LYAELQAAGFDVLLDDRNERPGVKFSDLELTGIPHRIVIGEKGLDAGTFEYKGRRDAESV 559 Query: 428 DMSLEEVINYASH 440 ++S EE++ + Sbjct: 560 NISKEELLAKIAK 572 >gi|300214322|gb|ADJ78738.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS) [Lactobacillus salivarius CECT 5713] Length = 649 Score = 239 bits (610), Expect = 7e-61, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 152/443 (34%), Gaps = 37/443 (8%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 L +E RD + ++L L + + G+ W+P G + I +++ G Sbjct: 235 LQRQKEARERDHRVIGNELDLF--FVDPKVGAGLPYWMPNGATIRRVIERYIIDKEVAWG 292 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKS 124 + P L + +L+ +SG +D Y ++M D D M P + ++ H +S Sbjct: 293 FQHVYTPVLANLNLYKQSGHWDHYREDMFPPMDMGDGEMLELRPMNCPSHIQVYNHHKRS 352 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR LP ++ + R E + + + + P+ + + + Sbjct: 353 YRELPLRIAELGMMHRYEKSGALTGLSRVREMTLNDGHDFIEPDHIEDEIKTLIKLMTEV 412 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS-ENTDFDDII 243 ++ + R D T+ + D M S DD+ Sbjct: 413 YNDFDITDYRFRLS--------------YRDPKNTEKYFDDDEMWEKSQSKLKAAMDDMG 458 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 E A Y DV + +L + +S ++ F ++ + Sbjct: 459 LEYFEAEGEAAFYGPKIDVQTKT---ALGGEETLSTIQLD----FLLPERFD----LKYI 507 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 GADG++H + + M A + + G W + I + + Sbjct: 508 GADGEEHRPVMVHRGIVSTMERFTAYLTEMYKGAFPTWLAPHQ-----VDIIPVKNDLHM 562 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D + ++L G V DD E++G + A + P +++G + VS+ V ++ Sbjct: 563 DYVNDLSSKLRAHGIRVTVDDRNEKMGYKIRQAQVNKIPYTLVIGDEEVSNGTVTVRKYG 622 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 M+ +E N N Sbjct: 623 EEKTNTMTKDEFKNLLFEDIENY 645 >gi|296208047|ref|XP_002750943.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like [Callithrix jacchus] Length = 475 Score = 239 bits (610), Expect = 7e-61, Method: Composition-based stats. Identities = 144/456 (31%), Positives = 227/456 (49%), Gaps = 44/456 (9%) Query: 3 RSKYFLPI-LQENP--------RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNV 53 S+ F P L+E+ D S +LML+ G+I+ S G Y LP +A++ + Sbjct: 42 LSRVFQPQNLREDQVLSLEGRSGDLTCKSQRLMLQVGLIYPASPGCYHLLPYTVRAMEKL 101 Query: 54 NAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEV 113 +I +E G ++++P+L A+LW + R+D GKE+LRL DR+ K GPTHEE Sbjct: 102 VRVIDQEMQVIGGQKVNMPSLSPAELWQATNRWDLMGKELLRLRDRHGKEYCLGPTHEEA 161 Query: 114 MT-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKH 172 +T I SY+ LPF YQ+ KFRDE RPRFG++R REF MKD Y+FD +PE ++ Sbjct: 162 ITALIASQKKLSYKQLPFLLYQVTRKFRDEPRPRFGLLRCREFYMKDMYTFDSSPEAAQQ 221 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 +Y+ + +Y +F+RLGL+ + ++A G IGG +SHEF + D GE + Sbjct: 222 TYSLVCDAYCSLFNRLGLRFVKVQANVGSIGGTMSHEFQLPMDIGEDWLAICPSC----- 276 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + A + ++ + +GIEVGH FY GT Sbjct: 277 ---------------------SFSANMETLDVSQMNCPACQGPLTKTKGIEVGHTFYLGT 315 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 KYS +A F GK +MG YG+G R++AA IE + WP +AP++ LI Sbjct: 316 KYSSIFNAQFTNVYGKPSLAEMGCYGLGVTRILAAAIEVLSTEDCVRWPSLLAPYQACLI 375 Query: 353 NIKA--HDQVCRDACEKIYARLSKV----GCDVFWDDMGE-QIGSQFAVADLLGFPLQVI 405 K ++ + ++Y +++ +V DD IG++ A G+P +I Sbjct: 376 PPKKGSKEEAASELAGQLYDHITEAVPQLHGEVLLDDRTHLTIGNRLKDASKFGYPFVII 435 Query: 406 VGSKFVSDSK-VEIKHRLTGIREDMSLEEVINYASH 440 G + + D E+ + TG ++ + V++ + Sbjct: 436 AGKRALEDPAHFEVWCQNTGEVVFLTKDGVMDLLTQ 471 >gi|158336193|ref|YP_001517367.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017] gi|158306434|gb|ABW28051.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017] Length = 616 Score = 239 bits (610), Expect = 7e-61, Method: Composition-based stats. Identities = 79/450 (17%), Positives = 152/450 (33%), Gaps = 39/450 (8%) Query: 2 RRSKYFLPILQENPR-DAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIRE 59 ++ K +L +E R D + L L + I G+ W P G + + R+ Sbjct: 203 KQLKAYLHQKEEAQRRDHRLLGKNLKLFS--IEDNAGGGLVFWHPRGARIRQVIETYWRQ 260 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 + G + P + + DLW SG +D Y M + +A P + ++ Sbjct: 261 AHTQGGYELLYTPHMANLDLWKTSGHFDFYRDSMFDQMEVETQAYQIKPMNCPFHVLTYQ 320 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + SYR P + ++ +R E G+MR R F DA+ F L + + + Sbjct: 321 HDLHSYREFPLRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPDQVADE-ILAVL 379 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 + G + + + P S E D T Sbjct: 380 DLTETVLSDFGFRDYEVNLSTRPDKSVGSDE-----------------IWDLATQDLRTA 422 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 D E A Y D+ K+ D++ + S ++ F ++ + Sbjct: 423 LDRKGWEYLTDEGGGAFYGPKIDL---KIRDAIGRLWQCSTIQVD----FNLPERFKMEY 475 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + + + G++ ++ ++ G +W V + + Sbjct: 476 VAA---DGTRQRPIMIHRAIFGSLERFFGILIENYAGDFPLWLAPVQIRLLVV------S 526 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 R ++ +L + G D GE++G Q + L P+ +VG K V + I Sbjct: 527 DAQRPYALEVLEQLQQKGFRAEIDQTGERLGKQIRQSALEKIPVVAVVGQKEVEAQTLNI 586 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNNRPV 448 + R + +E + L E+ + + Sbjct: 587 RTRHSEEQELLKLPELCEKMQSAIDAKQHI 616 >gi|121593268|ref|YP_985164.1| prolyl-tRNA synthetase [Acidovorax sp. JS42] gi|222109990|ref|YP_002552254.1| prolyl-tRNA synthetase [Acidovorax ebreus TPSY] gi|152074743|sp|A1W4B3|SYP_ACISJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782898|sp|B9ME00|SYP_DIAST RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|120605348|gb|ABM41088.1| prolyl-tRNA synthetase [Acidovorax sp. JS42] gi|221729434|gb|ACM32254.1| prolyl-tRNA synthetase [Acidovorax ebreus TPSY] Length = 581 Score = 239 bits (610), Expect = 7e-61, Method: Composition-based stats. Identities = 117/237 (49%), Positives = 160/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ SH+LM+R G+I + GIY+++P+G + + V AI+REE Sbjct: 1 MKASQFFISTLKEAPADAEVVSHQLMMRAGLIKKLGAGIYNYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E ++P +Q A+LW E+GR+D G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 61 MNRAGAVECTMPVVQPAELWQETGRFDKMGPELLRIHDRHGRDFVIQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ KFRDE RPRFG+MR REF+MKDAYSFD G+K SY M + Sbjct: 121 ELRSYKQLPKNLYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDQAGAKASYQVMAQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R GL+ + A+SG IGGDLS EF V+A TGE + D+ E Sbjct: 181 YRRIFDRFGLRYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYC-PASDYAANMEKA 236 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 73/188 (38%), Positives = 109/188 (57%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ + RGIEVGH+FY GTKYS M+ATF G DGK + +MG Sbjct: 393 VADLRNVVAGDLSPDGQGELAIERGIEVGHVFYLGTKYSKAMNATFLGEDGKPAFFEMGC 452 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKV 375 YGIG R+ AA IE +HD +GIIWPD++APF + + + + + E +YA L Sbjct: 453 YGIGVTRLPAAAIEQNHDERGIIWPDAIAPFTVVICPVGMDRSEAVKAQAESLYADLLAA 512 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD GE+ G+ FA +L+G P +V +G K + + +VE +HR + + +++ Sbjct: 513 GVDVILDDRGERPGAMFADWELIGVPHRVTIGDKSLKEGQVEYQHRRDASATKVGVADIL 572 Query: 436 NYASHRFS 443 + R + Sbjct: 573 AHVKERLA 580 >gi|146295842|ref|YP_001179613.1| prolyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|166980111|sp|A4XHN7|SYP_CALS8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|145409418|gb|ABP66422.1| prolyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 572 Score = 239 bits (610), Expect = 7e-61, Method: Composition-based stats. Identities = 123/285 (43%), Positives = 166/285 (58%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F+P ++E P DAEI SHKLMLR+G + Q S GIY +LPLG + L + I+REE Sbjct: 1 MKVSELFMPTMKETPSDAEIESHKLMLRSGFMRQLSSGIYVYLPLGYRVLRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ + L +LW ESGR+ +G EM ++ DRN++ GPTHEE T I R+ Sbjct: 61 MDRAGAQEVHMSALMPKELWEESGRWAVFGPEMFKIKDRNEREYCLGPTHEEAFTYIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR+LP YQIQ KFRDE RPRFGVMR REF MKDAYSFD+ EG SY KM+ + Sbjct: 121 EVTSYRDLPKILYQIQTKFRDERRPRFGVMRCREFTMKDAYSFDMNEEGLDISYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+RIF R GL + A++G +GG SHEF+V + GE ++ K + D Sbjct: 181 YVRIFKRCGLDVKIVEADTGAMGGSNSHEFMVPSSVGEAEIAYCKACGYAANLEKAECLD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 + + ++Q Y E + + KR I Sbjct: 241 EPVENTEEIKQMQEVYTPNVRTIEELVNFLNIDAKRFVKTMIYRA 285 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 4/194 (2%) Query: 256 YAATSDVHNEKLFDSLPEN---KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 +D+ N D P+ K RGIEVGHIF GTKY+ + + G+ + Sbjct: 375 VTKFADLRNITQDDLCPKCLSQKVTIERGIEVGHIFKLGTKYTEAFNCVYTDEKGEKKLM 434 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R AA+IE HD GIIWP +VAP+++ ++ + D+ +IY L Sbjct: 435 IMGCYGIGINRTAAAIIEQMHDEDGIIWPITVAPYEVIVVPVNIKDEQQSKIAFEIYEDL 494 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 K G +V DD E+ G +F ADL+G P +V +G K ++D ++E+++R T ++ +E Sbjct: 495 QKKGVEVLIDDRDERAGVKFKDADLIGIPFRVTIGRK-IADGRIEVRNRRTKESVEVDIE 553 Query: 433 EVINYASHRFSNNR 446 + + + + + Sbjct: 554 SAVEFILNLINEEK 567 >gi|110598676|ref|ZP_01386941.1| threonyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031] gi|110339729|gb|EAT58239.1| threonyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031] Length = 657 Score = 239 bits (610), Expect = 7e-61, Method: Composition-based stats. Identities = 73/453 (16%), Positives = 151/453 (33%), Gaps = 42/453 (9%) Query: 2 RRSKYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K ++ +L+E R D +L L + + G+ WLP G + + + ++EE Sbjct: 237 KQLKEYVTLLEEAKRRDHRKLGAELELFM-LSAEVGSGLPIWLPKGAIIRNELESFLKEE 295 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-----MIYGPTHEEVMT 115 Q + G + + P + + +L+ SG Y Y +D+ + P + Sbjct: 296 QRKRGYLPVYTPHIGNIELYKRSGHYPYYSDSQFPPLTYHDEEGRKEQYLLKPMNCPHHH 355 Query: 116 DIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSY 174 I+ S ++SYR+LP + +R E G++R+R F D++ + + Sbjct: 356 LIYSSKMRSYRDLPIRLTEFGTVYRHEQSGELNGLVRARGFTQDDSHIYCRPDQLVDE-I 414 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIP 233 +F LG + R + D + + + Sbjct: 415 CSAIELTQFVFGTLGFNDVQTRLS--------------MHDPENQTKYGGTAEVWAQAEK 460 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 D + I + Y D + D+L ++ ++ Sbjct: 461 DVKEAADRMGIEYFIGIGEASFYGPKIDFI---VRDALGRKWQLGTVQVDYVMP------ 511 Query: 294 YSLPMSATFKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 T+ G+D + H + G+M V+ G +W V + + Sbjct: 512 --ERFDLTYIGSDSQKHRPVVIHRAPFGSMERFIGVLIEHTAGNFPLWLAPVQAVVLPIA 569 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 + D + + L G D E+IG + A+L P +++G K Sbjct: 570 ------EDVHDYAKSVQQALLGAGIRSELDTRNEKIGKKIREAELAKVPCMIVIGQKEKE 623 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 +V ++ G ++ + + Sbjct: 624 SGEVSLRRHRIGDEGCFTVTGLTEKLLKEIAAR 656 >gi|319775327|ref|YP_004137815.1| prolyl-tRNA synthetase [Haemophilus influenzae F3047] gi|319897767|ref|YP_004135964.1| prolyl-tRNA synthetase [Haemophilus influenzae F3031] gi|329122677|ref|ZP_08251255.1| proline--tRNA ligase [Haemophilus aegyptius ATCC 11116] gi|317433273|emb|CBY81648.1| prolyl-tRNA synthetase [Haemophilus influenzae F3031] gi|317449918|emb|CBY86130.1| prolyl-tRNA synthetase [Haemophilus influenzae F3047] gi|327472551|gb|EGF17981.1| proline--tRNA ligase [Haemophilus aegyptius ATCC 11116] Length = 572 Score = 239 bits (610), Expect = 7e-61, Method: Composition-based stats. Identities = 146/428 (34%), Positives = 205/428 (47%), Gaps = 39/428 (9%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V ++REE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y IF+RLGL ++A++G IGG SHEF VLA +GE V DF E Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDFAANIELAEAI 239 Query: 236 -------------NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 D ++ ++ +VEQ+ P T K D + RG Sbjct: 240 AIGERQAPTAEMCLVDTPNVKTIAELVEQFNLPIEKTVKTLIVKGADENQPLVALIIRGD 299 Query: 283 EVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 + + F + G +GA+ + I + Sbjct: 300 HELNEIKAQKHPLVADPLEFADETEIKAKIGAGVGSLGAVNLNIPAIIDRTVALMSDFSC 359 Query: 343 SVAPFKISLINIKAHDQVCRDACEKIYA------------RLS-KVGCDV--FWDDMGEQ 387 N+ V + L K G +V + Q Sbjct: 360 GANINGKHYFNVNWERDVAMPEVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIF-----Q 414 Query: 388 IGSQFAVA 395 +G +++ A Sbjct: 415 LGKKYSEA 422 Score = 176 bits (445), Expect = 9e-42, Method: Composition-based stats. Identities = 70/188 (37%), Positives = 106/188 (56%), Gaps = 4/188 (2%) Query: 261 DVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P+ K RGIEVGHIF G KYS M AT +G DGK + MG YG Sbjct: 384 DLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGKKYSEAMKATVQGEDGKPLVMTMGCYG 443 Query: 319 IGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKVG 376 IG RVVA+ IE HD + I D +APF ++++ + + + E++Y L G Sbjct: 444 IGVTRVVASAIEQHHDDRGIIWPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQG 503 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV +DD E+ G FA +L+G P V++G K + + ++E K+R TG +E +S +++++ Sbjct: 504 VDVIFDDRKERPGVMFADMELVGVPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLS 563 Query: 437 YASHRFSN 444 + + N Sbjct: 564 VLNEKLGN 571 >gi|186477394|ref|YP_001858864.1| prolyl-tRNA synthetase [Burkholderia phymatum STM815] gi|226699127|sp|B2JHD3|SYP_BURP8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|184193853|gb|ACC71818.1| prolyl-tRNA synthetase [Burkholderia phymatum STM815] Length = 578 Score = 239 bits (610), Expect = 7e-61, Method: Composition-based stats. Identities = 136/288 (47%), Positives = 182/288 (63%), Gaps = 5/288 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE Sbjct: 1 MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPIGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R Sbjct: 61 MNRAGAIELLMPAVQPAELWQESGRWEKYGPELLRFKDRKQSDFVIGPTHEEVVTDIARG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQ+Q KFRDE+RPRFGVMR REF+MKDAYSFD +G + SY KM+ + Sbjct: 121 QIKSYRQLPVNFYQVQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDMDGLRESYRKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y+RIF RLGL + A++G IGG SHEF V+ADTGE + DF E + Sbjct: 181 YVRIFTRLGLDFRAVAADNGSIGGSGSHEFHVIADTGEDDIAYCPT-SDFASNVEAAEAL 239 Query: 240 ---DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 + + + + + P A + E L L + + E Sbjct: 240 PLIAERAAPKEELRKTSTPGKAKCEAVAEHLNIPLEKTIKSIILATEN 287 Score = 173 bits (437), Expect = 8e-41, Method: Composition-based stats. Identities = 72/191 (37%), Positives = 105/191 (54%), Gaps = 3/191 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K V RGIEVGH+F GTKYS M+ATF GK + Sbjct: 382 PEPVVADIRNVKKDDPSPDGKGVIDICRGIEVGHVFQLGTKYSEAMNATFLDESGKPQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 QMG YGIG R++ A IE + D KGIIWP+S+APF++ L + R+ +K++ Sbjct: 442 QMGCYGIGITRILGAAIEQNFDDKGIIWPESIAPFEVVLCPMGYDRSDAVREQADKLHDE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R + + Sbjct: 502 LTAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGRRDAEATLLPV 561 Query: 432 EEVINYASHRF 442 E + Sbjct: 562 EAAAQAVIDKI 572 >gi|167856063|ref|ZP_02478806.1| prolyl-tRNA synthetase [Haemophilus parasuis 29755] gi|219871797|ref|YP_002476172.1| prolyl-tRNA synthetase [Haemophilus parasuis SH0165] gi|254782903|sp|B8F7C2|SYP_HAEPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|167852812|gb|EDS24083.1| prolyl-tRNA synthetase [Haemophilus parasuis 29755] gi|219692001|gb|ACL33224.1| prolyl-tRNA synthetase [Haemophilus parasuis SH0165] Length = 571 Score = 239 bits (610), Expect = 7e-61, Method: Composition-based stats. Identities = 146/412 (35%), Positives = 197/412 (47%), Gaps = 36/412 (8%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPLASGMYNWLPTGLRVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++GA+E+ +P +Q ADLWVES R++ YG E+LR DR D+ + GPTHEEV+TD+ R Sbjct: 61 MNKSGALEVEMPVVQPADLWVESERWEDYGPELLRFKDRGDRPFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR REFLMKDAYSF + E + +Y+ M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRGREFLMKDAYSFHTSKESLQETYDVMHQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y IF RLGL P+ A++G IGG SHEF VLA +GE V D+ E Sbjct: 181 YSNIFTRLGLDFRPVAADTGSIGGSASHEFQVLAQSGEDDVVF-STESDYAANIELAEAI 239 Query: 236 -------------NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS--AR 280 D + ++ +VEQ+ P T K + E V+ R Sbjct: 240 AVGERQAPTAEMTLVDTPNAKTIAELVEQFNLPIEKTVKTLIVK--GASEEQPLVALVIR 297 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 G + + F + G +G + + VI + Sbjct: 298 GDHELNEIKAVKCEEVAEPFEFADEAEIKAKIGAGIGSLGPVNMPIPVIIDRSVALMSDF 357 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYA-------------RLSKVGCDV 379 NI V + L K G +V Sbjct: 358 GAGANIDGKHYFNINWERDVALPKIADLRNVVEGDPSPDGKGTLLIKRGIEV 409 Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 113/207 (54%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D +I + +D+ N D P+ K + RGIEVGHIF GTKYS M Sbjct: 364 DGKHYFNINWERDVALPKIADLRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 AT +G DG+ + MG YGIG RVVAA IE HD + I D++APF ++++ + Sbjct: 424 KATVQGEDGRPQTMIMGCYGIGVTRVVAAAIEQHHDERGIIWPTDAIAPFTVAVVPMNMH 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + E +Y L G DV +DD E+ G FA +L+G P +++G K + + ++ Sbjct: 484 KSESVQTFAEDLYKTLRSQGVDVIFDDRKERPGVMFADMELIGVPHMLVIGEKNLENGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K+R TG ++ ++ ++++++ R + Sbjct: 544 EYKNRRTGEKQMIAKDQLLDFLKGRIN 570 >gi|325103180|ref|YP_004272834.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Pedobacter saltans DSM 12145] gi|324972028|gb|ADY51012.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Pedobacter saltans DSM 12145] Length = 642 Score = 239 bits (609), Expect = 7e-61, Method: Composition-based stats. Identities = 80/446 (17%), Positives = 158/446 (35%), Gaps = 38/446 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y I + RD +L L T + G+ WLP G + + + +++ Q Sbjct: 228 LTEYIQRIEEAKKRDHRKLGKELELFT-FSEKVGLGLPLWLPKGTALRERLVSFLQKAQQ 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRS 120 + G ++ P + +L++ SG YD YG + + + + P + +I++S Sbjct: 287 KAGYDQVITPHIGHKNLYITSGHYDKYGADSFQPIKTPQEGEEFFLKPMNCPHHCEIYKS 346 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SY++LP + +R E G+ R R F DA+ F P+ K + K+ Sbjct: 347 KPRSYKDLPVRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCR-PDQVKEEFKKVID 405 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L +F LG + D + D + + Sbjct: 406 LVLYVFKALGFDEYIAQVSLR--------------DPENKSKYIGSDENWILAENAIIEA 451 Query: 240 DDIISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 L ++VE A Y D + D+L ++ ++ Sbjct: 452 AAEKGLPTVVETGEAAFYGPKLDFM---VKDALGRKWQLGTIQVDYNLP--------ERF 500 Query: 299 SATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + G+D + H + G++ AV+ G +W + + Sbjct: 501 ELEYTGSDNQKHRPVMIHRAPFGSLERFVAVLIEHCAGNFPLWLTPEQFIVLPI------ 554 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + + +K+ L+ D E+IG + A++ P +I+G K + D V Sbjct: 555 SEKFEEYGKKVLDSLNNSDIRGLIDLRDEKIGRKIRDAEVKKLPYMLIIGEKEMQDGMVS 614 Query: 418 IKHRLTGIREDMSLEEVINYASHRFS 443 ++ G + M++EE + Sbjct: 615 VRKHGEGDKGSMTIEEFKSLLLDEIK 640 >gi|296282100|ref|ZP_06860098.1| threonyl-tRNA synthetase [Citromicrobium bathyomarinum JL354] Length = 669 Score = 239 bits (609), Expect = 7e-61, Method: Composition-based stats. Identities = 79/453 (17%), Positives = 147/453 (32%), Gaps = 48/453 (10%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +++ + + RD ++ L + + + G W P G K + + +R + + Sbjct: 237 LNEHLHRLEEAAKRDHRKLGREMDLF--HLQEEAHGSVFWHPQGYKIWRQLESYMRRKMD 294 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD-------------RNDKAMIYGPT 109 G E+ P + A W +SG + Y + M + D ++ M P Sbjct: 295 GAGYREIKTPQVMDARQWEQSGHWGKYRENMFVIPDEVPNTEDEGELVSKDADWMALKPM 354 Query: 110 HEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPE 168 + +F+ I SYR LP ++ R+E G+MR R+F DA+ F T + Sbjct: 355 NCPAHVLVFKQGITSYRELPIRLGEMGCCHRNEPHGALHGLMRVRQFTQDDAHIFC-TEK 413 Query: 169 GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFM 228 ++ G K + P S A+ M Sbjct: 414 QVVEEVRAFIELADAVYRDFGFKYAI-KLALRPEQRFGSDADWDKAEQELRDAVAEAGMM 472 Query: 229 DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIF 288 + E + A YA + H L D++ +V + Sbjct: 473 NDEYGWEE------------LPGEGAFYAPKLEWH---LTDAIGRTWQVGTIQGDRVLP- 516 Query: 289 YFGTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 + A++ G DG+ H + G+ ++ GK +W Sbjct: 517 -------ERLDASYIGEDGEKHRPVMLHRAIFGSYERFIGILIEHFAGKLPVWLAPTQAV 569 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 +++ D + A+L G D E+I + L P ++VG Sbjct: 570 VATIV------SDADDYASEALAKLRAAGIRAESDLRNEKINYKVREHSLAKVPHLLVVG 623 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 + + V ++ + MSL+E I Sbjct: 624 KREAEEGTVAVRTLGEREQRVMSLDEAIAMLRD 656 >gi|262276749|ref|ZP_06054542.1| threonyl-tRNA synthetase [alpha proteobacterium HIMB114] gi|262223852|gb|EEY74311.1| threonyl-tRNA synthetase [alpha proteobacterium HIMB114] Length = 637 Score = 239 bits (609), Expect = 8e-61, Method: Composition-based stats. Identities = 80/448 (17%), Positives = 147/448 (32%), Gaps = 44/448 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD L L + S G W G ++ +R++Q Sbjct: 231 EYLHRIEEAEKRDHRKLGKALDLF--HFQEESPGAVFWHQKGWSLFQSLVKFMRDKQTDA 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G +E++ P + LW +SG ++ + + M D ++K P + +F +KS Sbjct: 289 GYLEVNTPEMLDKTLWEKSGHWEKFQEHMYT-TDADEKTFAIKPMNCPGHIQVFNQGLKS 347 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 Y++LP + R E G+MR R F DA+ F + ++ S L Sbjct: 348 YKDLPLKISEFGKVHRYEPSGALHGLMRVRAFTQDDAHIFCTEEQITEESLKVT-NLILD 406 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I+ G K++ ++ P + + Sbjct: 407 IYKSFGFKNVKLKFSDRPEKR-----------------VGDDKIWNKSEKALLDAIKTSG 449 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I + A Y + L D++ + + ++ G A++ Sbjct: 450 LKYEINKGEGAFYGPKIEF---VLIDAIGRDWQCGTLQVDFNLPGRLG--------ASYV 498 Query: 304 GADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 DG M + R + +IE Sbjct: 499 ANDGSKKIPVMLHRAMFGSLERFIGILIEHHTGKFPFWLSPEQVAVLPI-------SNKQ 551 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D K+ L K G DD E+I + + P+ +I G+K V ++ + I+ Sbjct: 552 NDYASKVKLLLEKKGLRSIIDDRNEKINYKIREHSVSKIPVLMICGAKEVQNNTITIRRL 611 Query: 422 LTGIREDMSLEEVINYASHRFSNNRPVL 449 ++ +SLEE + S +N P + Sbjct: 612 GQTNQQTVSLEEAVTNLS--LESNTPSI 637 >gi|148698861|gb|EDL30808.1| prolyl-tRNA synthetase (mitochondrial)(putative), isoform CRA_a [Mus musculus] gi|148698862|gb|EDL30809.1| prolyl-tRNA synthetase (mitochondrial)(putative), isoform CRA_a [Mus musculus] Length = 475 Score = 239 bits (609), Expect = 8e-61, Method: Composition-based stats. Identities = 147/456 (32%), Positives = 226/456 (49%), Gaps = 46/456 (10%) Query: 3 RSKYFLPI-LQENP--------RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNV 53 S+ F P L+E+ D S +LML+ G+I S G Y +P +A++ + Sbjct: 42 LSRMFQPQNLREDQVLSLEGRASDLTCKSQRLMLQVGLILPASPGCYHLMPYTVRAVEKL 101 Query: 54 NAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEV 113 +I +E G ++++P+L A+LW + R+D G+E+LRL DR+ K GPTHEE Sbjct: 102 VRVIDQEMQAIGGQKINMPSLSPAELWRATSRWDLMGRELLRLRDRHGKEYCLGPTHEEA 161 Query: 114 MT-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKH 172 +T + SY+ LP YQ+ KFRDE RPRFG++R REF MKD Y+FD + E ++ Sbjct: 162 VTALVASQKKLSYKQLPLLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSSEAAQE 221 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 +Y + +Y R+F RLGL+ + RA+ G IGG +SHEF + D GE ++ Sbjct: 222 TYGLVCDAYCRLFDRLGLQWMKARADVGSIGGTMSHEFQLPVDIGEDRLVVCPSC----- 276 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 A T + + + +GIEVGH FY GT Sbjct: 277 ---------------------HFSANTEILDLSQKICPDCQGPLTETKGIEVGHTFYLGT 315 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 KYS +A F A G+ +MG YG+G R++AA IE I WP +AP+++ +I Sbjct: 316 KYSSIFNALFTNAHGESLLAEMGCYGLGVTRILAAAIEVLSTEDCIRWPRLLAPYQVCVI 375 Query: 353 NIKA--HDQVCRDACEKIYARLSKV-----GCDVFWDDMGE-QIGSQFAVADLLGFPLQV 404 K + + EK+Y + + G +V DD IG++ A+ LG+P + Sbjct: 376 PPKKGSKETAATEIVEKLYDDVMEAVPQLRG-EVLLDDRTHLTIGNRLKDANKLGYPFVI 434 Query: 405 IVGSKFVSDSK-VEIKHRLTGIREDMSLEEVINYAS 439 I G + + D E+ + TG ++ E V+ + Sbjct: 435 IAGKRALEDPAHFEVWSQNTGEVVFLTKEGVMELLT 470 >gi|94676542|ref|YP_588910.1| threonyl-tRNA synthetase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|123081480|sp|Q1LT04|SYT_BAUCH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|94219692|gb|ABF13851.1| threonyl-tRNA synthetase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 642 Score = 239 bits (609), Expect = 8e-61, Method: Composition-based stats. Identities = 74/447 (16%), Positives = 139/447 (31%), Gaps = 40/447 (8%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ Y + + RD +L L I + + G+ W G + IR + Sbjct: 227 MQLKCYLQSLQEVKKRDHRKIGQQLDLY--HIQEEAPGMVFWHVDGWIIFRELETFIRSK 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 E+ P + LW ++G + +Y E + ++ P + IF Sbjct: 285 LQTYKYQEVKSPVMIDRTLWEQTGHWSNY-AEHIFTTSSENREYCIKPMNCPGHVQIFNQ 343 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 I SYR+LP + +R+E G+MR R F DA+ F + N Sbjct: 344 QINSYRDLPLRMAEFGSCYRNEPSGSLHGLMRVRNFTQDDAHIFCTEEQVCDE-INNNIK 402 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++H G K I + + P + D T Sbjct: 403 MLYEVYHTFGFKKILVNLSTRPAHR-----------------IGNDKIWDKAEQDLATTL 445 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + L A Y + L DS + ++ F ++ + Sbjct: 446 TNNGILFKYNVGAGAFYGPKIEF---TLLDSFDRAWQCGTIQLD----FSLPSR----LK 494 Query: 300 ATFKGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + + + V + +G++ ++ + G W +++ Sbjct: 495 AFYINKNNQRLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPTQVVLMNI------S 548 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + ++ +LS D E+IG + L P +I G + + KV I Sbjct: 549 DNQSNYVIQLMQKLSTANIRAKIDLRNEKIGFKIREHTLRRVPYMLICGDQEIKMGKVTI 608 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R + I H ++ Sbjct: 609 RTRYGKNLGMFEMNNFIEKLQHEINHR 635 >gi|164685792|ref|ZP_01945930.2| prolyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177'] gi|165918393|ref|ZP_02218479.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 334] gi|164601306|gb|EAX33436.2| prolyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177'] gi|165917899|gb|EDR36503.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 334] Length = 564 Score = 239 bits (609), Expect = 8e-61, Method: Composition-based stats. Identities = 130/237 (54%), Positives = 168/237 (70%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++FL ++E P DA +ASH+LM+R GM + + G+Y+WLPLG + L V ++REE Sbjct: 1 MKVSQFFLATVKETPADAVLASHQLMIRAGMFRKLASGLYTWLPLGLRVLQKVADVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A LW ESGR+++YG E+LR+ DR+ +GPTHEEV+TDI R Sbjct: 61 MNRAGALELLMPIVQPASLWQESGRWEAYGAELLRIMDRHQNGFCFGPTHEEVITDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSFDL +G + +Y KMF + Sbjct: 121 ELKSYKQLPLNFYQIQTKFRDEIRPRFGVMRSREFLMKDAYSFDLDEKGMQAAYEKMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF RLGL + A++G IGGD SHEF VLAD GE V S D+ E Sbjct: 181 YRRIFTRLGLNFRAVLADTGAIGGDYSHEFQVLADVGEDTVVYSD-ESDYAANIEKA 236 Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 82/203 (40%), Positives = 112/203 (55%), Gaps = 4/203 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLP 297 DD +N E+ P + +D+ D P+ K ARGIEVG +F G KYS Sbjct: 363 DDFHWINVNWER-DVPLGSVADIRKVVEGDISPDGKGRLRFARGIEVGQVFQLGDKYSRK 421 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 M+AT GK Y+QMG YGIG R VAA IE +HD +GIIWP +APF I+L+ + H Sbjct: 422 MNATVVDELGKSRYLQMGCYGIGVSRTVAAAIEQNHDERGIIWPTPMAPFFIALVPVNMH 481 Query: 358 DQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 R+ACEK+Y L G +V WDD E+ G FA DL+G P ++++ + V Sbjct: 482 KSYRVREACEKLYNELIDAGYEVLWDDRKERPGVMFADMDLIGIPHRLVISESGLDRGIV 541 Query: 417 EIKHRLTGIREDMSLEEVINYAS 439 E K R + E++SLE V++ Sbjct: 542 EYKARKSKEAENVSLENVLSVFR 564 >gi|282850156|ref|ZP_06259535.1| proline--tRNA ligase [Veillonella parvula ATCC 17745] gi|282579649|gb|EFB85053.1| proline--tRNA ligase [Veillonella parvula ATCC 17745] Length = 572 Score = 239 bits (609), Expect = 8e-61, Method: Composition-based stats. Identities = 112/235 (47%), Positives = 158/235 (67%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M +K + P L+E P DA++ S +LMLR G + + + G+YS+LPLG +++ + AI+REE Sbjct: 1 MLATKLYAPTLREVPSDADVVSQQLMLRAGFMRKTANGLYSFLPLGWRSIKKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R A E+ +P LQ A++W ESGR+++YG EM+R+ DR+D GPTHEE++T + ++ Sbjct: 61 MDRASAQEIMMPILQPAEIWKESGRWNAYGAEMMRINDRHDNEFCLGPTHEEMITTLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP YQIQ KFRDE RPR+G+MRSREF+MKDAYSFD+ G SY M+ + Sbjct: 121 EINSYRQLPVNLYQIQSKFRDERRPRYGLMRSREFIMKDAYSFDVDEAGLDESYKSMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R GL P+ A+SG IGG +HEF+ +A+ GE + D+ E Sbjct: 181 YTRIFTRCGLTFRPVEADSGAIGGSGTHEFMAIAEAGEADIVYCTKC-DYAANIE 234 Score = 165 bits (417), Expect = 2e-38, Method: Composition-based stats. Identities = 67/178 (37%), Positives = 100/178 (56%), Gaps = 2/178 (1%) Query: 269 DSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+ A+GIEVG +F GTKYS + ATF +G+ + + MG YGIG R +A Sbjct: 394 DVCPKCGGALEHAKGIEVGQVFKLGTKYSEALQATFLDQNGRPNPMIMGCYGIGVSRTLA 453 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A IE HD GIIWP S+APF+ ++ I A D+ + IY L G DV DD + Sbjct: 454 AAIEQYHDENGIIWPRSIAPFEAVIVPINAKDEALMSTSQTIYTALQNAGVDVLLDDRKD 513 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 + G +F ADL+G+PL++ V + +++VEI+ R +G +++ V + + N Sbjct: 514 RAGVKFKDADLIGYPLRITVSKNTLENNEVEIQIRKSGEALPCAIDSVADKVTELLQN 571 >gi|160946146|ref|ZP_02093357.1| hypothetical protein PEPMIC_00108 [Parvimonas micra ATCC 33270] gi|158447669|gb|EDP24664.1| hypothetical protein PEPMIC_00108 [Parvimonas micra ATCC 33270] Length = 648 Score = 239 bits (609), Expect = 8e-61, Method: Composition-based stats. Identities = 85/444 (19%), Positives = 168/444 (37%), Gaps = 37/444 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +L L++ RD +L + MI Q G+ WLP G V I +++ Sbjct: 234 YLEFLEDAKQRDHRKIGKELGIF--MISQNVGAGLPFWLPKGATIRRVVERYIVDKEIEC 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHIK 123 G + P L + DL+ SG +D Y M D + ++ P + +I+ + + Sbjct: 292 GYEHVYTPILANVDLYKTSGHWDHYQDSMFPPMDLGNGELLVLRPMNCPHHMEIYNNDVH 351 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY+ P ++ + R E+ G+ R RE + DA+ F P+ K + ++ Sbjct: 352 SYKEFPIRIAELGMMHRYEMSGTLSGLQRVREMTLNDAHIFVR-PDQIKEEFTRVVNLMK 410 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDD 241 ++ +K+ R D + + D M + + DD Sbjct: 411 SVYEDFDIKNFRFRLS--------------YRDPENKEKYFDDDEMWNNAEAMLKSAMDD 456 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + A Y DV ++ ++ + +S ++ F ++ T Sbjct: 457 LGYEYFEAKGEAAFYGPKLDV---QVKTAIGLEETLSTIQLD----FLLPERFD----LT 505 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + G DGK+ + + + G + + + + +P +AP ++ ++ I Sbjct: 506 YVGEDGKNTHRPVVIHR-GIVSTMERFVAYLIEEYKGAFPTWLAPEQVKILPISDK---F 561 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ +K V DD E+IG + A L P +IVG V++ V ++ R Sbjct: 562 NDYAYELQKEFAKKDIRVAVDDRTEKIGLKIREAQLAKIPYSLIVGENEVNERTVSVRKR 621 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 G + M E ++ ++ Sbjct: 622 GEGDKGSMKFEAFLDKILEEVNSK 645 >gi|73919762|sp|Q8CFI5|SYPM_MOUSE RecName: Full=Probable prolyl-tRNA synthetase, mitochondrial; AltName: Full=Proline--tRNA ligase; Short=ProRS; Flags: Precursor gi|24416455|gb|AAH38817.1| Prolyl-tRNA synthetase (mitochondrial)(putative) [Mus musculus] Length = 475 Score = 239 bits (609), Expect = 8e-61, Method: Composition-based stats. Identities = 147/456 (32%), Positives = 226/456 (49%), Gaps = 46/456 (10%) Query: 3 RSKYFLPI-LQENP--------RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNV 53 S+ F P L+E+ D S +LML+ G+I S G Y +P +A++ + Sbjct: 42 LSRMFQPQNLREDQVLSLEGRASDLTCKSQRLMLQVGLILPASPGCYHLMPYTVRAVEKL 101 Query: 54 NAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEV 113 +I +E G ++++P+L A+LW + R+D G+E+LRL DR+ K GPTHEE Sbjct: 102 VRVIDQEMQAIGGQKINMPSLSPAELWRATSRWDLMGRELLRLRDRHGKEYCLGPTHEEA 161 Query: 114 MT-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKH 172 +T + SY+ LP YQ+ KFRDE RPRFG++R REF MKD Y+FD + E ++ Sbjct: 162 VTALVASQKKLSYKQLPLLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSSEAAQE 221 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 +Y + +Y R+F RLGL+ + RA+ G IGG +SHEF + D GE ++ Sbjct: 222 TYGLVCDAYCRLFDRLGLRWMKARADVGSIGGTMSHEFQLPVDIGEDRLVVCPSC----- 276 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 A T + + + +GIEVGH FY GT Sbjct: 277 ---------------------HFSANTEILDLSQKICPDCQGPLTETKGIEVGHTFYLGT 315 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 KYS +A F A G+ +MG YG+G R++AA IE I WP +AP+++ +I Sbjct: 316 KYSSIFNALFTNAHGESLLAEMGCYGLGVTRILAAAIEVLSTEDCIRWPRLLAPYQVCVI 375 Query: 353 NIKA--HDQVCRDACEKIYARLSKV-----GCDVFWDDMGE-QIGSQFAVADLLGFPLQV 404 K + + EK+Y + + G +V DD IG++ A+ LG+P + Sbjct: 376 PPKKGSKETAATEIVEKLYDDVMEAVPQLRG-EVLLDDRTHLTIGNRLKDANKLGYPFVI 434 Query: 405 IVGSKFVSDSK-VEIKHRLTGIREDMSLEEVINYAS 439 I G + + D E+ + TG ++ E V+ + Sbjct: 435 IAGKRALEDPAHFEVWSQNTGEVVFLTKEGVMELLT 470 >gi|319788986|ref|YP_004150619.1| prolyl-tRNA synthetase [Thermovibrio ammonificans HB-1] gi|317113488|gb|ADU95978.1| prolyl-tRNA synthetase [Thermovibrio ammonificans HB-1] Length = 568 Score = 239 bits (609), Expect = 9e-61, Method: Composition-based stats. Identities = 115/254 (45%), Positives = 163/254 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F+P +E+P DAEI SHKL++R G I + + G+Y LPLG + + + +IR+E Sbjct: 1 MRFSRAFIPTKKESPADAEIPSHKLLVRAGFIRKVASGLYDILPLGARVIRKIEQVIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA E+ +P + A+LW ESGR+D YGKEM++ DR+++ GPT EE++TD+ R Sbjct: 61 MERAGAQEVILPIMHPAELWQESGRWDVYGKEMIKFKDRHERDYALGPTAEEMITDLVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQI KFRDE+RPRFG+MRSREF+MKDAYSF + E ++ Y MF + Sbjct: 121 EVKSYKELPLNLYQIGRKFRDEIRPRFGLMRSREFIMKDAYSFHASDEDAEREYWNMFET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL+ + A++G IGG SHEF+V+ADTGE+++ + + Sbjct: 181 YSRIFKRLGLEFKAVEADTGEIGGSFSHEFMVIADTGESKLVYCPECGYAASTEKAQQVR 240 Query: 241 DIISLNSIVEQWTA 254 + N E Sbjct: 241 PEVPPNREGEFEAV 254 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 76/189 (40%), Positives = 105/189 (55%), Gaps = 3/189 (1%) Query: 256 YAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 A DV + + P+ V RGIEVGHIF GTKYS M ATF G + + Sbjct: 378 VAEFVDVTEVRGGEPCPKCGAPLVEKRGIEVGHIFKLGTKYSEAMGATFVDEQGNEKPMV 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG RV+AA +E HD GIIWP +APF++ +I + + +A E++Y+ L Sbjct: 438 MGCYGIGVTRVMAAAVEQGHDENGIIWPVEIAPFEVIVIPVNVKKEEIVEAAERVYSELM 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G DV DD + G +F ADL+G P QVIVG K S+ VE+K R +G R ++ ++ Sbjct: 498 EAGFDVLLDDRNARPGFKFKDADLIGIPYQVIVGKK-ASEGVVELKIRRSGERLELPVDG 556 Query: 434 VINYASHRF 442 V+ Sbjct: 557 VVGKLRELI 565 >gi|238019359|ref|ZP_04599785.1| hypothetical protein VEIDISOL_01223 [Veillonella dispar ATCC 17748] gi|237864058|gb|EEP65348.1| hypothetical protein VEIDISOL_01223 [Veillonella dispar ATCC 17748] Length = 572 Score = 239 bits (609), Expect = 9e-61, Method: Composition-based stats. Identities = 112/235 (47%), Positives = 158/235 (67%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M +K + P L+E P DA++ S +LMLR G + + + G+YS+LPLG +++ + AI+REE Sbjct: 1 MLATKLYAPTLREVPSDADVVSQQLMLRAGFMRKTANGLYSFLPLGWRSIKKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R A E+ +P LQ A++W ESGR+++YG EM+R+ DR+D GPTHEE++T + ++ Sbjct: 61 MDRASAQEIMMPILQPAEIWKESGRWNAYGAEMMRINDRHDNEFCLGPTHEEMITTLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP YQIQ KFRDE RPR+G+MRSREF+MKDAYSFD+ G SY M+ + Sbjct: 121 EINSYRQLPVNLYQIQSKFRDERRPRYGLMRSREFIMKDAYSFDVDEAGLDESYKSMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R GL P+ A+SG IGG +HEF+ +A+ GE + D+ E Sbjct: 181 YTRIFTRCGLTFRPVEADSGAIGGSGTHEFMAIAEAGEADIVYCTKC-DYAANIE 234 Score = 163 bits (413), Expect = 5e-38, Method: Composition-based stats. Identities = 64/189 (33%), Positives = 102/189 (53%), Gaps = 1/189 (0%) Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 A + ++ + + A+GIEVG +F GTKYS + ATF +G+ + + MG Sbjct: 384 VAPIRLITDDDVCPTCG-GTLEHAKGIEVGQVFKLGTKYSEALQATFLDQNGRPNPMIMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R +AA IE HD GIIWP ++APF+ ++ I A D+ + IY L Sbjct: 443 CYGIGVSRTLAAAIEQYHDENGIIWPRAIAPFEAVIVPINAKDEALMSTSQTIYTALQDA 502 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD ++ G +F ADL+G+PL++ V + +++VEI+ R +G +++ V Sbjct: 503 GVDVLLDDRKDRAGVKFKDADLIGYPLRITVSKNTLENNEVEIQIRKSGEAITCAIDSVA 562 Query: 436 NYASHRFSN 444 + + Sbjct: 563 TKVTELLQD 571 >gi|294791808|ref|ZP_06756956.1| proline--tRNA ligase [Veillonella sp. 6_1_27] gi|294793669|ref|ZP_06758806.1| proline--tRNA ligase [Veillonella sp. 3_1_44] gi|294455239|gb|EFG23611.1| proline--tRNA ligase [Veillonella sp. 3_1_44] gi|294457038|gb|EFG25400.1| proline--tRNA ligase [Veillonella sp. 6_1_27] Length = 572 Score = 239 bits (609), Expect = 9e-61, Method: Composition-based stats. Identities = 112/235 (47%), Positives = 158/235 (67%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M +K + P L+E P DA++ S +LMLR G + + + G+YS+LPLG +++ + AI+REE Sbjct: 1 MLATKLYAPTLREVPSDADVVSQQLMLRAGFMRKTANGLYSFLPLGWRSIKKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R A E+ +P LQ A++W ESGR+++YG EM+R+ DR+D GPTHEE++T + ++ Sbjct: 61 MDRASAQEIMMPILQPAEIWKESGRWNAYGAEMMRINDRHDNEFCLGPTHEEMITTLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP YQIQ KFRDE RPR+G+MRSREF+MKDAYSFD+ G SY M+ + Sbjct: 121 EINSYRQLPVNLYQIQSKFRDERRPRYGLMRSREFIMKDAYSFDVDEAGLDESYKSMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R GL P+ A+SG IGG +HEF+ +A+ GE + D+ E Sbjct: 181 YTRIFTRCGLTFRPVEADSGAIGGSGTHEFMAIAEAGEADIVYCTKC-DYAANIE 234 Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 71/232 (30%), Positives = 113/232 (48%), Gaps = 3/232 (1%) Query: 216 TGETQVFCSKDFMD-FPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 T E + + M+ + + D + + + + D P+ Sbjct: 340 TEEFAIVVDESVMETYNVCGGANKKDAHYVNINPKRDFNVEDIIVAPIRLITKDDVCPKC 399 Query: 275 K--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 A+GIEVG +F GTKYS + ATF +G+ + + MG YGIG R +AA IE Sbjct: 400 GGALEHAKGIEVGQVFKLGTKYSEALQATFLDQNGRPNPMIMGCYGIGVSRTLAAAIEQY 459 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 HD GIIWP S+APF+ ++ I A D+ + IY L G DV DD ++ G +F Sbjct: 460 HDENGIIWPRSIAPFEAVIVPINAKDEALMSTSQTIYTALQNAGVDVLLDDRKDRAGVKF 519 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 ADL+G+PL++ V + +++VEI+ R +G +++ V + + N Sbjct: 520 KDADLIGYPLRITVSKNTLENNEVEIQIRKSGEALPCAIDSVSDKVTELLQN 571 >gi|148826625|ref|YP_001291378.1| prolyl-tRNA synthetase [Haemophilus influenzae PittEE] gi|166980127|sp|A5UDZ4|SYP_HAEIE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|148716785|gb|ABQ98995.1| prolyl-tRNA synthetase [Haemophilus influenzae PittEE] Length = 572 Score = 239 bits (609), Expect = 9e-61, Method: Composition-based stats. Identities = 127/265 (47%), Positives = 167/265 (63%), Gaps = 1/265 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWEQYGPELLRFEDRGNRNFVLGPTHEEVITDLIRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF+RLGL ++A++G IGG SHEF VLA +GE V DF E + Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDFAANIELAEAV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 I + + T + NE Sbjct: 240 AIGERQAPTAEMTLVDTPNAKTINE 264 Score = 175 bits (443), Expect = 2e-41, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 110/208 (52%), Gaps = 4/208 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D ++ + D+ N D P+ K RGIEVGHIF G KYS M Sbjct: 364 DGKHYFNVNWERDVAMPEVFDLRNVVEGDRSPDGKGTLQIKRGIEVGHIFQLGKKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 AT +G DGK + MG YGIG RVVA+ IE HD + I D +APF ++++ + Sbjct: 424 KATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQHHDDRGIIWPSDEIAPFTVAIVPMNMH 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + E++Y L G DV +DD E+ G FA +L+G P V++G K + + ++ Sbjct: 484 KSESVQKYAEELYRTLQSQGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLDNGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSN 444 E K+R +G +E +S +++++ + + N Sbjct: 544 EYKNRRSGEKEMISKDKLLSVLNEKLGN 571 >gi|332247927|ref|XP_003273115.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial [Nomascus leucogenys] Length = 475 Score = 239 bits (609), Expect = 9e-61, Method: Composition-based stats. Identities = 139/433 (32%), Positives = 221/433 (51%), Gaps = 35/433 (8%) Query: 17 DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS 76 D S +LML+ G+I+ S G Y LP +A++ + +I +E G ++++P+L Sbjct: 65 DLTCKSQRLMLQVGLIYPASPGCYHLLPYTVRAMEKLVRVIDQEMQAIGGQKVNMPSLSP 124 Query: 77 ADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMT-DIFRSHIKSYRNLPFTFYQI 135 A+LW + R+D GKE+LRL DR+ K GPTHEE +T I SY+ LPF YQ+ Sbjct: 125 AELWQATNRWDLMGKELLRLRDRHGKEYCLGPTHEEAITALIASQKKLSYKQLPFLLYQV 184 Query: 136 QLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 KFRDE RPRFG++R REF MKD Y+FD +PE ++ +Y+ + +Y +F+RLGL + + Sbjct: 185 TRKFRDEPRPRFGLLRGREFYMKDMYTFDSSPEAAQQTYSLVCDAYCSLFNRLGLPFVKV 244 Query: 196 RAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP 255 +A+ G IGG +SHEF + D GE ++ + Sbjct: 245 QADVGTIGGTVSHEFQLPVDIGEDRLAICPRC--------------------------SF 278 Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 A + ++ + +GIEVGH FY GTKYS +A F GK +MG Sbjct: 279 SANMETLDFSQMNCPACQGPLTKTKGIEVGHTFYLGTKYSSIFNAQFTNVYGKPTLAEMG 338 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA--HDQVCRDACEKIYARLS 373 YG+G R++AA IE + WP +AP++ LI K ++ + ++Y ++ Sbjct: 339 CYGLGVTRILAAAIEVLSTEDCVRWPSLLAPYQACLIPPKKGSKEEAASELIGQLYDHIT 398 Query: 374 KV----GCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSK-VEIKHRLTGIRE 427 + +V DD IG++ A+ G+P +I G + + D E+ + TG Sbjct: 399 EAVPQLHGEVLLDDRTHLTIGNRLKDANKFGYPFVIIAGKRALEDPAYFEVWCQNTGEVV 458 Query: 428 DMSLEEVINYASH 440 ++ + V++ + Sbjct: 459 FLTKDGVMDLLTQ 471 >gi|300690369|ref|YP_003751364.1| proline--tRNA ligase [Ralstonia solanacearum PSI07] gi|299077429|emb|CBJ50055.1| Proline--tRNA ligase [Ralstonia solanacearum PSI07] Length = 574 Score = 239 bits (609), Expect = 9e-61, Method: Composition-based stats. Identities = 118/233 (50%), Positives = 163/233 (69%), Gaps = 1/233 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SHKLM+R GMI + GIY+++P+G +A+ V I+REE Sbjct: 1 MKASQFFISTLKEAPADAEIVSHKLMMRAGMIKKLGAGIYTYMPVGLRAIRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+EM +P +Q +LW E+GR+D G+E++R+ DR+++ ++ PT EEV+TDI R+ Sbjct: 61 MNAAGAVEMLMPVVQPGELWQETGRWDKMGEELMRVKDRHERDLVIQPTSEEVVTDIART 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ +P FYQIQ KFRDE RPRFG+MR REF MKDAYSFD EG K SY KM+ + Sbjct: 121 EIRSYKQMPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDVEGMKVSYGKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y RIF R GL+ + A++G IGG SHEF V+A+TGE + D+ Sbjct: 181 YTRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIAETGEDAIVY-SPESDYAAN 232 Score = 159 bits (402), Expect = 8e-37, Method: Composition-based stats. Identities = 67/172 (38%), Positives = 102/172 (59%), Gaps = 3/172 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N D P+ K RGIEVGH+F GT+YS M+ATF +GK + Sbjct: 382 PEAEVADLRNVVEGDPSPDGKGALALCRGIEVGHVFMLGTRYSESMNATFLDENGKTQPM 441 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE ++D +GIIWP S+APF++ + + + R ++++A Sbjct: 442 VMGCYGIGITRILGAAIEQNYDARGIIWPVSIAPFEVVICPVGYDRSEAVRAEADRLHAE 501 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 L+ G DV DD GE+ G FA +L+G P +V+VG + + + K+E++ R Sbjct: 502 LAAAGIDVILDDRGERPGVMFADWELIGVPFRVVVGERGLKEGKLELQGRRD 553 >gi|262197045|ref|YP_003268254.1| prolyl-tRNA synthetase [Haliangium ochraceum DSM 14365] gi|262080392|gb|ACY16361.1| prolyl-tRNA synthetase [Haliangium ochraceum DSM 14365] Length = 584 Score = 239 bits (609), Expect = 9e-61, Method: Composition-based stats. Identities = 114/254 (44%), Positives = 154/254 (60%), Gaps = 1/254 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S F+P L+E+P DA++ SH M+R G + + + G+Y++LPLG + + + I+REE Sbjct: 1 MRLSWAFIPTLKESPADAQVVSHVYMVRGGYMRRLAAGVYTFLPLGWRVIRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P +LW ESGR+ YG E+LR DR +GPTHEEV+ D+ R Sbjct: 61 MDAAGAQEVLMPAAIPGELWQESGRWSKYGPELLRFQDRKGADFCFGPTHEEVVVDMVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 KSYR LP T YQIQ KFRDELRPR G+MR REF+MKDAYSFD++ E + HSY M+ + Sbjct: 121 DTKSYRELPLTLYQIQSKFRDELRPRAGLMRGREFIMKDAYSFDVSEEAAMHSYTGMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPSENTDF 239 Y RIF R GL P+ A++G IGG SHEF VLA++GE + C + Sbjct: 181 YERIFRRCGLDFRPVEADTGAIGGSRSHEFQVLAESGEDAIVSCDACEYAANVEEAKVPA 240 Query: 240 DDIISLNSIVEQWT 253 + E Sbjct: 241 PSEPGIVHQGEGEA 254 Score = 179 bits (454), Expect = 9e-43, Method: Composition-based stats. Identities = 71/184 (38%), Positives = 110/184 (59%), Gaps = 3/184 (1%) Query: 269 DSLPEN---KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVV 325 D P + + RGIEVGH+FY GT YS PM TF G++ ++MG YGIG R+ Sbjct: 396 DRCPRCDSGRLRAHRGIEVGHVFYLGTTYSAPMGCTFLDEAGQETAMEMGCYGIGITRIA 455 Query: 326 AAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMG 385 AA IE +HD GI+WP S+AP++++++ ++ D+ A E +YA+L + G +V DD Sbjct: 456 AAAIEQNHDEGGIVWPLSIAPYEVAILPLQMKDEDVAAAGETLYAKLKECGIEVLLDDRA 515 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 E+ G++F ADL+G PL+V +G + + D KVE+K R G E + + + + + + Sbjct: 516 ERPGAKFKDADLIGIPLRVAIGKRSLDDGKVEVKWRKGGDAELVPVADAVEHVAGLIRAE 575 Query: 446 RPVL 449 R L Sbjct: 576 RERL 579 >gi|94986656|ref|YP_594589.1| threonyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00] gi|122988800|sp|Q1MRV8|SYT_LAWIP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|94730905|emb|CAJ54268.1| Threonyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00] Length = 642 Score = 239 bits (609), Expect = 9e-61, Method: Composition-based stats. Identities = 78/442 (17%), Positives = 156/442 (35%), Gaps = 41/442 (9%) Query: 2 RRSKYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K +L L+E R D +L L + G+ W P G + +R+E Sbjct: 223 KLLKTYLTQLEEAKRRDHRKLGKELNLFEFH-EDIAPGMVFWQPNGMLLRTILEDFLRKE 281 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G + P L +LW +SG Y +Y + M + + P + ++++ Sbjct: 282 HLKRGYQLVQGPQLLRRELWEKSGHYTNYKENM-YFTEIEEDVYGIKPMNCVSHMLLYKT 340 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 H+ SYR LP ++++ + R E G++R R+F DA+ + + + Sbjct: 341 HLHSYRELPQRYFELGVVHRHEKSGVLHGLLRVRQFTQDDAHIICMPEQLEEEIIQ---- 396 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + L + ++ T + S + + Sbjct: 397 -VITFVRDLMSLFDFN--------------YHIVISTRPEKSIGSDYAWELATSALIQAV 441 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + I SI A Y D+ K+ D++ ++S + F ++ Sbjct: 442 EKINLPYSINHGDGAFYGPKIDI---KVTDAIGREWQLSTIQCD----FTLPERF----E 490 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + G DGK H + G++ ++ + G W + +++ Sbjct: 491 LEYVGQDGKRHQPVMIHRAIFGSIERFIGILTEHYAGAFPTWLTPIQVKILTVT------ 544 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + +Y++L VG V D E++G + A L P +++G K + V + Sbjct: 545 DAQTPFAKHVYSQLQDVGIRVGLDIRNEKLGFKIREAQLAKIPYILVIGQKELELESVNV 604 Query: 419 KHRLTGIREDMSLEEVINYASH 440 + R S+ E I + Sbjct: 605 RLRTGENIGMQSVTEFIKLVEN 626 >gi|189461814|ref|ZP_03010599.1| hypothetical protein BACCOP_02480 [Bacteroides coprocola DSM 17136] gi|189431408|gb|EDV00393.1| hypothetical protein BACCOP_02480 [Bacteroides coprocola DSM 17136] Length = 646 Score = 239 bits (609), Expect = 9e-61, Method: Composition-based stats. Identities = 82/444 (18%), Positives = 152/444 (34%), Gaps = 39/444 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD ++ L KG+ WLP G + +R Q R Sbjct: 231 YLALLEEAKKRDHRKIGKEMDLFM-FSDTVGKGLPMWLPKGTALRIRLQDFLRRIQARYD 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P + + L+V SG Y YGK+ + + P + I+++ + Sbjct: 290 YQEVMCPPIGNKLLYVTSGHYAKYGKDAFQPIHTPEEGEEYFLKPMNCPHHCMIYKNTPR 349 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R E G+ R R F DA+ F + + ++ Sbjct: 350 SYRDLPLRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDE-FLRVMDIIS 408 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +F +GL++ + D + + D + + Sbjct: 409 IVFKSMGLENFEAQISLR--------------DKVNREKYIGSDENWEKAEQAIVEACEE 454 Query: 243 ISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 L + VE A Y D + D++ ++ ++ Sbjct: 455 KGLKAKVEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFQLE 503 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G+D + H + G+M AV+ GK +W + I + Sbjct: 504 YMGSDNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LTPDQVAILPISEK 557 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ L K DD E+IG + ++ P +IVG K + +V ++ Sbjct: 558 FNDYANQVRLELKKSDIRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVAVRK 617 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 + G + M +E+ + N Sbjct: 618 QGEGDKGTMKIEDFAKNVAEEVHN 641 >gi|260914628|ref|ZP_05921094.1| proline-tRNA ligase [Pasteurella dagmatis ATCC 43325] gi|260631227|gb|EEX49412.1| proline-tRNA ligase [Pasteurella dagmatis ATCC 43325] Length = 571 Score = 239 bits (609), Expect = 9e-61, Method: Composition-based stats. Identities = 120/250 (48%), Positives = 161/250 (64%), Gaps = 1/250 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P +A I SH+LMLR GMI + G+Y+WLP G + L+ V IIREE Sbjct: 1 MRTSQYLFSTLKETPAEASIVSHQLMLRAGMIRPLASGLYTWLPTGLRVLNKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +++GA+E+ + Q A+LW ESGR++ YG E+LR DR D+ + GPT+EEV+TD+ R Sbjct: 61 MDKSGALEVKMAVTQPAELWQESGRWEEYGPELLRFKDRGDRDFVIGPTNEEVITDLIRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY+ LP Y IQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ + Sbjct: 121 ECASYKQLPLNLYHIQTKFRDEVRPRFGVMRSREFVMKDAYSFHTTHECLQKTYDVMYET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF+RLGL ++A++G IGG SHEF VLA +GE V DF E + Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVF-STESDFAANIELAEAV 239 Query: 241 DIISLNSIVE 250 + + E Sbjct: 240 ALGERGAPTE 249 Score = 181 bits (460), Expect = 2e-43, Method: Composition-based stats. Identities = 73/192 (38%), Positives = 116/192 (60%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K V RGIEVGHIF GTKYS M+AT +G DG+ + Sbjct: 379 PLPQIADLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSAAMNATVQGEDGRPQTM 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYAR 371 MG YGIG RV+AA IE HD +GIIWP+++APFK++++ + + + E++Y Sbjct: 439 IMGCYGIGVTRVIAAAIEQHHDERGIIWPENIAPFKVAIVPMNMHKSESVQQFAEELYRT 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G +V +DD E+ G FA +L+G P +++G K + ++E K+R +G +E ++ Sbjct: 499 LMAQGVEVIFDDRKERPGVMFADMELIGVPHMIVIGEKNLEKGEIEYKNRRSGEKEMIAK 558 Query: 432 EEVINYASHRFS 443 E++++ +F+ Sbjct: 559 EQLLDVLKAKFN 570 >gi|240947869|ref|ZP_04752309.1| prolyl-tRNA synthetase [Actinobacillus minor NM305] gi|240297831|gb|EER48267.1| prolyl-tRNA synthetase [Actinobacillus minor NM305] Length = 571 Score = 239 bits (609), Expect = 9e-61, Method: Composition-based stats. Identities = 123/243 (50%), Positives = 160/243 (65%), Gaps = 1/243 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V I+REE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFNDRGNRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V DF E + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVIF-STESDFAANIELAEAV 239 Query: 241 DII 243 + Sbjct: 240 AVG 242 Score = 179 bits (455), Expect = 7e-43, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 111/207 (53%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPM 298 D ++ + T D+ N D P+ K V RGIEVGHIF G KYS M Sbjct: 364 DGKHYFNVNWERDVALPETFDLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGKKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 +AT +G DGK + MG YGIG RVVAA IE HD + I D +APF ++++ + Sbjct: 424 NATVQGEDGKPLVMTMGCYGIGVTRVVAAAIEQHHDERGIIWPSDEIAPFTVAIVPMNMH 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + E++Y L G DV +DD E+ G FA +L+G P V++G K + + ++ Sbjct: 484 KSEKVQAFAEELYKTLKAQGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLENGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K+R TG ++ ++ E+++ + + Sbjct: 544 EYKNRRTGEKQMIAKEQLLAFLAENVK 570 >gi|74152256|dbj|BAE32409.1| unnamed protein product [Mus musculus] Length = 511 Score = 239 bits (609), Expect = 9e-61, Method: Composition-based stats. Identities = 147/456 (32%), Positives = 226/456 (49%), Gaps = 46/456 (10%) Query: 3 RSKYFLPI-LQENP--------RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNV 53 S+ F P L+E+ D S +LML+ G+I S G Y +P +A++ + Sbjct: 78 LSRMFQPQNLREDQVLSLEGRASDLTCKSQRLMLQVGLILPASPGCYHLMPYTVRAVEKL 137 Query: 54 NAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEV 113 +I +E G ++++P+L A+LW + R+D G+E+LRL DR+ K GPTHEE Sbjct: 138 VRVIDQEMQAIGGQKINMPSLSPAELWRATSRWDLMGRELLRLRDRHGKEYCLGPTHEEA 197 Query: 114 MT-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKH 172 +T + SY+ LP YQ+ KFRDE RPRFG++R REF MKD Y+FD + E ++ Sbjct: 198 VTALVASQKKLSYKQLPLLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSSEAAQE 257 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 +Y + +Y R+F RLGL+ + RA+ G IGG +SHEF + D GE ++ Sbjct: 258 TYGLVCDAYCRLFDRLGLRWMKARADVGSIGGTMSHEFQLPVDIGEDRLVVCPSC----- 312 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 A T + + + +GIEVGH FY GT Sbjct: 313 ---------------------HFSANTEILDLSQKICPDCQGPLTETKGIEVGHTFYLGT 351 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 KYS +A F A G+ +MG YG+G R++AA IE I WP +AP+++ +I Sbjct: 352 KYSSIFNALFTNAHGESLLAEMGCYGLGVTRILAAAIEVLSTEDCIRWPRLLAPYQVCVI 411 Query: 353 NIKA--HDQVCRDACEKIYARLSKV-----GCDVFWDDMGE-QIGSQFAVADLLGFPLQV 404 K + + EK+Y + + G +V DD IG++ A+ LG+P + Sbjct: 412 PPKKGSKETAATEIVEKLYDDVMEAVPQLRG-EVLLDDRTHLTIGNRLKDANKLGYPFVI 470 Query: 405 IVGSKFVSDSK-VEIKHRLTGIREDMSLEEVINYAS 439 I G + + D E+ + TG ++ E V+ + Sbjct: 471 IAGKRALEDPAHFEVWSQNTGEVVFLTKEGVMELLT 506 >gi|189345705|ref|YP_001942234.1| threonyl-tRNA synthetase [Chlorobium limicola DSM 245] gi|238692169|sp|B3EEC1|SYT_CHLL2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189339852|gb|ACD89255.1| threonyl-tRNA synthetase [Chlorobium limicola DSM 245] Length = 657 Score = 239 bits (609), Expect = 9e-61, Method: Composition-based stats. Identities = 77/453 (16%), Positives = 153/453 (33%), Gaps = 42/453 (9%) Query: 2 RRSKYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E R D +L L + + G+ WLP G + ++EE Sbjct: 237 KLLKEHIARQEEAKRRDHRKLGTELELFM-LSPEIGSGLPVWLPKGAVIRSELETFLKEE 295 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-----MIYGPTHEEVMT 115 Q + G + + P + + +L+ SG Y Y +D+ + P + Sbjct: 296 QRKRGYLPVYTPHIGNIELYKRSGHYPYYSDSQFPPLTYHDEDGKQEQYLLKPMNCPHHH 355 Query: 116 DIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSY 174 I+ S ++SYR+LP + +R E G++R+R F D++ + + Sbjct: 356 LIYSSKLRSYRDLPIRLTEFGTVYRHEQSGELNGLVRARGFTQDDSHIYCTPEQLVDE-I 414 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIP 233 +F LG + R + D Q + + + + Sbjct: 415 CNAIDLTQFVFGTLGFSEVQTRLS--------------MHDPANQQKYGGTAEIWEQAEK 460 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 D + I + Y D + D+L ++ ++ Sbjct: 461 DVREAADRMGIDYFIGVGEASFYGPKIDFI---VRDALGRKWQLGTVQVDYVMP------ 511 Query: 294 YSLPMSATFKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 ++ G+DG+ H + G+M V+ G +W V + + Sbjct: 512 --ERFDLSYIGSDGQKHRPVVIHRAPFGSMERFIGVLIEHTAGNFPLWLAPVQAVVLPIA 569 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 + D + I+ L G V D E+IG + A++ P +IVG K Sbjct: 570 ------EEVHDYAKTIHTALLAAGIRVEIDTRNEKIGRKIREAEIGKIPCMIIVGQKERD 623 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ ++ +G ++ +I+ S Sbjct: 624 SGEISLRRHRSGDMGSFTVPGLIDILKKEISER 656 >gi|312870359|ref|ZP_07730484.1| threonine--tRNA ligase [Lactobacillus oris PB013-T2-3] gi|311094060|gb|EFQ52379.1| threonine--tRNA ligase [Lactobacillus oris PB013-T2-3] Length = 600 Score = 239 bits (609), Expect = 9e-61, Method: Composition-based stats. Identities = 76/441 (17%), Positives = 154/441 (34%), Gaps = 36/441 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + D + ++L L + + G+ W+P G + I + + G Sbjct: 188 KRQEAREHDHRVIGNQLDLF--FVDPKVGAGLPYWMPKGATIRRTIERYIIDREVADGYE 245 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYR 126 + P L + D + SG ++ Y +M D D M P + I++ HI+SYR Sbjct: 246 HVYTPVLMNLDAYKTSGHWEHYRDDMFPPMDMGDGEMLEIRPMNCPSHIQIYKHHIRSYR 305 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ + R E G+ R RE + D ++F + + K+ + ++ Sbjct: 306 DLPMRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVAVDQIRDE-FAKILNLIMDVY 364 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + R + + + + + D DD+ Sbjct: 365 KDFDITDYSFRLSLRD-------------PKNKEKYYGNDEMWDESQKLLKAAMDDLNLD 411 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y D+ + +L ++ +S ++ FG ++ G Sbjct: 412 YYEAEGEAAFYGPKLDIQTKT---ALGNDETMSTIQLDFMQPDRFG--------LSYVGK 460 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DGK+H + +G M A + + G W I ++ D Sbjct: 461 DGKEHMPVMIHRGIVGTMERFVAYLTEIYKGAFPTWLAPEQVH-----IIPVSEEKHGDY 515 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +K+ ++ V DD E++G + A P ++VG V ++ V ++ Sbjct: 516 AQKLADKMKAAQIRVVVDDRNEKMGYKIREAQTQKVPYTLVVGDDEVKNNAVSVRKYGED 575 Query: 425 IREDMSLEEVINYASHRFSNN 445 + MS ++ +N ++ Sbjct: 576 AQNSMSQDDFMNEILADIASY 596 >gi|212219440|ref|YP_002306227.1| prolyl-tRNA synthetase [Coxiella burnetii CbuK_Q154] gi|212013702|gb|ACJ21082.1| prolyl-tRNA synthetase [Coxiella burnetii CbuK_Q154] Length = 566 Score = 239 bits (609), Expect = 9e-61, Method: Composition-based stats. Identities = 130/237 (54%), Positives = 168/237 (70%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++FL ++E P DA +ASH+LM+R GM + + G+Y+WLPLG + L V ++REE Sbjct: 3 MKVSQFFLATVKETPADAVLASHQLMIRAGMFRKLASGLYTWLPLGLRVLQKVADVVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A LW ESGR+++YG E+LR+ DR+ +GPTHEEV+TDI R Sbjct: 63 MNRAGALELLMPIVQPASLWQESGRWEAYGAELLRIMDRHQNGFCFGPTHEEVITDIARQ 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSFDL +G + +Y KMF + Sbjct: 123 ELKSYKQLPLNFYQIQTKFRDEIRPRFGVMRSREFLMKDAYSFDLDEKGMQAAYEKMFDA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF RLGL + A++G IGGD SHEF VLAD GE V S D+ E Sbjct: 183 YRRIFTRLGLNFRAVLADTGAIGGDYSHEFQVLADVGEDTVVYSD-ESDYAANIEKA 238 Score = 164 bits (414), Expect = 4e-38, Method: Composition-based stats. Identities = 82/203 (40%), Positives = 112/203 (55%), Gaps = 4/203 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLP 297 DD +N E+ P + +D+ D P+ K ARGIEVG +F G KYS Sbjct: 365 DDFHWINVNWER-DVPLGSVADIRKVVEGDISPDGKGRLRFARGIEVGQVFQLGDKYSRK 423 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 M+AT GK Y+QMG YGIG R VAA IE +HD +GIIWP +APF I+L+ + H Sbjct: 424 MNATVVDELGKSRYLQMGCYGIGVSRTVAAAIEQNHDERGIIWPTPMAPFFIALVPVNMH 483 Query: 358 DQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 R+ACEK+Y L G +V WDD E+ G FA DL+G P ++++ + V Sbjct: 484 KSYRVREACEKLYNELIDAGYEVLWDDRKERPGVMFADMDLIGIPHRLVISESGLDRGIV 543 Query: 417 EIKHRLTGIREDMSLEEVINYAS 439 E K R + E++SLE V++ Sbjct: 544 EYKARKSKEAENVSLENVLSVFR 566 >gi|149276293|ref|ZP_01882437.1| threonine--tRNA ligase (threonine tRNA synthetase) [Pedobacter sp. BAL39] gi|149232813|gb|EDM38188.1| threonine--tRNA ligase (threonine tRNA synthetase) [Pedobacter sp. BAL39] Length = 641 Score = 239 bits (609), Expect = 9e-61, Method: Composition-based stats. Identities = 81/444 (18%), Positives = 154/444 (34%), Gaps = 36/444 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y I + RD +L L + G+ WLP G + + + Q Sbjct: 228 LTEYLHMIEEAKKRDHRKLGKELELFA-FSEKVGMGLPLWLPKGAALRERLVQFLTRAQA 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRS 120 ++G ++ P + +L++ SG Y+ YGK+ + + + P + +I++ Sbjct: 287 KSGYEQVVTPHIGHKNLYITSGHYEKYGKDSFQPIKTPQEGEEFFLKPMNCPHHCEIYKV 346 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SY++LP F + +R E G+ R R F DA+ F P+ K + K+ Sbjct: 347 KPRSYKDLPLRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCR-PDQVKEEFKKVID 405 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L +F LG + D + D S + Sbjct: 406 LVLYVFKSLGFNDYIAQVSLR--------------DPDNKAKYIGSDENWQLAESAIIEA 451 Query: 240 DDIISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 L ++VE A Y D + D+L ++ ++ F +Y+ Sbjct: 452 AAEKGLPTVVEYGEAAFYGPKLDFM---VKDALGRKWQLGTIQVDYNLPERFELEYTGSD 508 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + V + G++ AV+ G +W I Sbjct: 509 NLK-------HRPVMIHRAPFGSLERFIAVLIEHCAGNFPLW------LSPEQFIILPIS 555 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + D +K+ L+ D E+IG + A++ P +I+G K +++ KV + Sbjct: 556 EKYEDYAKKVSDELNNSDIRGLIDFRDEKIGRKIRDAEVKKIPYMLIIGEKEMAEGKVSV 615 Query: 419 KHRLTGIREDMSLEEVINYASHRF 442 + G M+ +E Sbjct: 616 RKHGEGDLGAMTQQEFSELLIKEI 639 >gi|329768866|ref|ZP_08260294.1| threonyl-tRNA synthetase [Gemella sanguinis M325] gi|328837229|gb|EGF86866.1| threonyl-tRNA synthetase [Gemella sanguinis M325] Length = 647 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 156/444 (35%), Gaps = 35/444 (7%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 ++ + + RD +L + T + G+ WLP G + I +++ Sbjct: 230 QHLHRLQEARERDHRKLGKELGIFTT-SQKVGAGLPLWLPNGATIRRTIERYIVDKEVEL 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + S DL++ SG +D Y ++M + + + M+ P + ++++ S Sbjct: 289 GYDHVYTPIMGSKDLYITSGHWDHYQEDMFPPMEMDHETMVLRPMNCPHHMMVYKNERHS 348 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR LP ++ + R E ++ + + + P+ K + Sbjct: 349 YRELPIRIAELGMMHRYEASGAVSGLQRVRGMTLNDAHVFVRPDQLKDEFKLTVGLIQEA 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-SKDFMDFPIPSENTDFDDII 243 + LG+K+ R D T+ + + + D++ Sbjct: 409 YKDLGIKNFSYRLS--------------YRDPENTEKYFDDDNMWNNAQQMLKETADELG 454 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 E A Y DV E ++ + + +S ++ F ++ + Sbjct: 455 LDYVEAEGEAAFYGPKLDVQVET---AIGKQETLSTIQLD----FLLPERF----ELEYI 503 Query: 304 GADGKDHYVQMGSYGIG--AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DGK H + GI R+VA ++E + I ++ Sbjct: 504 GEDGKAHRPVVIHRGIVSTMERMVAFLLEEYKGDLPTWLAPNQVRI------IPVNNDYH 557 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++I L K G V DD E++G + A P +++G K V + V ++ Sbjct: 558 YDYSKEIMQELKKAGVKVTIDDRDEKLGYKIREAANKKIPYTLVIGDKEVENKAVNVRTF 617 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +++ S E + Sbjct: 618 GSHDQKEESFVEFKENILKEINER 641 >gi|139948347|ref|NP_758476.2| probable prolyl-tRNA synthetase, mitochondrial isoform 1 [Mus musculus] gi|123239922|emb|CAM27480.1| prolyl-tRNA synthetase (mitochondrial)(putative) [Mus musculus] Length = 475 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 146/456 (32%), Positives = 225/456 (49%), Gaps = 46/456 (10%) Query: 3 RSKYFLPI-LQENP--------RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNV 53 S+ F P L+E+ D S +LML+ G+I S G Y +P +A++ + Sbjct: 42 LSRMFQPQNLREDQVLSLEGRASDLTCKSQRLMLQVGLILPASPGCYHLMPYTVRAVEKL 101 Query: 54 NAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEV 113 +I +E G ++++P+L A+LW + R+D G+E+LRL DR+ K GPTHEE Sbjct: 102 VRVIDQEMQAIGGQKINMPSLSPAELWRATSRWDLMGRELLRLRDRHGKEYCLGPTHEEA 161 Query: 114 MT-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKH 172 +T + SY+ LP YQ+ KFRDE RPRFG++R REF MKD Y+FD + E ++ Sbjct: 162 VTALVASQKKLSYKQLPLLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSSEAAQE 221 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 +Y + +Y R+F RLGL+ + RA+ G IGG +SHEF + D GE ++ Sbjct: 222 TYGLVCDAYCRLFDRLGLQWMKARADVGSIGGTMSHEFQLPVDIGEDRLVVCPSC----- 276 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 A T + + + +GIEVGH FY T Sbjct: 277 ---------------------HFSANTEILDLSQKICPDCQGPLTETKGIEVGHTFYLST 315 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 KYS +A F A G+ +MG YG+G R++AA IE I WP +AP+++ +I Sbjct: 316 KYSSIFNALFTNAHGESLLAEMGCYGLGVTRILAAAIEVLSTEDCIRWPRLLAPYQVCVI 375 Query: 353 NIKA--HDQVCRDACEKIYARLSKV-----GCDVFWDDMGE-QIGSQFAVADLLGFPLQV 404 K + + EK+Y + + G +V DD IG++ A+ LG+P + Sbjct: 376 PPKKGSKETAATEIVEKLYDDIMEAVPQLRG-EVLLDDRTHLTIGNRLKDANKLGYPFVI 434 Query: 405 IVGSKFVSDSK-VEIKHRLTGIREDMSLEEVINYAS 439 I G + + D E+ + TG ++ E V+ + Sbjct: 435 IAGKRALEDPAHFEVWSQNTGEVVFLTKEGVMELLT 470 >gi|237744663|ref|ZP_04575144.1| threonyl-tRNA synthetase [Fusobacterium sp. 7_1] gi|229431892|gb|EEO42104.1| threonyl-tRNA synthetase [Fusobacterium sp. 7_1] Length = 637 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 78/443 (17%), Positives = 161/443 (36%), Gaps = 41/443 (9%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + K+ + + RD +L L + ++ G +LP G + + + R+E Sbjct: 226 KLKKHLKLVEEAEKRDHRKLGKELELF--FLSEYGPGFPFFLPKGMIVRNVLVDLWRKEH 283 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + +++ P + + +LW SG + +Y + M ++ ++ P + F+ Sbjct: 284 EKAEYLQLETPIMLNKELWEISGHWFNYRENMYT-SEIDEVEFAIKPMNCPGGVLAFKHQ 342 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP ++ R E G+MR R F D++ F + + Sbjct: 343 LHSYKDLPARLAELGKVHRHEFSGALHGLMRVRSFTQDDSHIFMTPEQVQDE-IIGVVNL 401 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + + +L + + P S E D + D Sbjct: 402 IDKFYSKLFGFEYEIELSTKPEKAIGSQE-----------------IWDMAESALAGALD 444 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I A Y D K+ D++ + ++ F ++ Sbjct: 445 KLGRKYKINPGDGAFYGPKLDF---KIKDAIGRMWQCGTIQLD----FNLPERFD----V 493 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 T+ G DG+ H + G++ ++ + G +W V +++ + Sbjct: 494 TYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFPMWLAPVQVKVMTI------ND 547 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEI 418 C ++I A+L ++G DD E IG + A+ P+Q+I+G V + +V I Sbjct: 548 ECVPYAKEIMAKLDELGIRAELDDRTETIGYKIREANGRYRIPMQLIIGKNEVENKEVNI 607 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + + SL+E NY Sbjct: 608 RRFGSKDQFSKSLDEFYNYVVDE 630 >gi|258512139|ref|YP_003185573.1| threonyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478865|gb|ACV59184.1| threonyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 648 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 71/434 (16%), Positives = 157/434 (36%), Gaps = 34/434 (7%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L + T + + +G+ WLP G K + I + + G + Sbjct: 239 EARERDHRRLGKELEIFT-LSPEVGQGLPLWLPNGAKIRRIIERYIVDLEESLGYQHVYT 297 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P L + +L+ SG ++ Y +M +++ ++ P + +++ + SYR LP Sbjct: 298 PHLANVELYKISGHWEHYKDDMYPPMKIDNEELVLRPMNCPHHMMVYKHRLHSYRELPIR 357 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 ++ R E+ G+ R R + DA+ F P+ + + + R++ G+ Sbjct: 358 IAELGTMHRYEMSGALAGLQRVRAMTLNDAHIFCR-PDQIEQEFTGVVRLIQRVYKDFGI 416 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 R + + + + + D+ E Sbjct: 417 DDYYHRLS-------------YRDPKNTEKYVQNDEMWELAQSTLRKVMLDLGLEFVEAE 463 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y DV ++ +L +++ +S ++ F+ ++ + + G DG+ H Sbjct: 464 GEAAFYGPKLDV---QVRTALGKDETLSTIQLD----FHLPNRF----NLEYVGEDGERH 512 Query: 311 YVQMGSYG-IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + G +G M A + + G W + + + + E++ Sbjct: 513 RPVVIHRGVVGTMERFVAFLIEQYKGAFPTW------LAPTQVVVASVADEFAGYAEEVA 566 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 A+L ++G D +IG + A P ++VG++ + V ++ G M Sbjct: 567 AKLRELGIRAEADVSDNKIGYKIRQAQTHKIPYTLVVGAREREEGSVSVRKYQAGDLGAM 626 Query: 430 SLEEVINYASHRFS 443 L++ + Sbjct: 627 PLDQFVRQIQDEIE 640 >gi|293603409|ref|ZP_06685836.1| proline--tRNA ligase [Achromobacter piechaudii ATCC 43553] gi|292818182|gb|EFF77236.1| proline--tRNA ligase [Achromobacter piechaudii ATCC 43553] Length = 576 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 125/265 (47%), Positives = 172/265 (64%), Gaps = 5/265 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y + L+E P +AE+ASH+LM R GMI + + GIY+++PLG K + V AI+REE Sbjct: 1 MRASNYHINTLKEAPSEAEVASHQLMTRAGMIRKLAGGIYTYMPLGLKIIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N +GAIE+ +P +Q A+LW ESGR++ YG E+LR+ DR+ + + PT EEV+TDI R+ Sbjct: 61 MNASGAIELLMPVVQPAELWQESGRWEQYGAELLRIKDRHQRDFVLQPTSEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD G+ SY+ M+ + Sbjct: 121 EIHSYRQLPLNFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDEAGALKSYDTMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD-- 238 Y+RIF+RLGL+ + A++G IGG SHEF V+A+TGE + + D+ E + Sbjct: 181 YMRIFNRLGLQFRAVAADTGSIGGTRSHEFQVIAETGEDLLVYNA-ETDYAANIELAEAV 239 Query: 239 --FDDIISLNSIVEQWTAPYAATSD 261 + + + P AA + Sbjct: 240 ALYPTRGAATQTMADVATPGAAKCE 264 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 69/189 (36%), Positives = 101/189 (53%), Gaps = 3/189 (1%) Query: 259 TSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGH+FY G KYS + ATF GK ++MG Sbjct: 387 VADLRNVVAGDPSPDGKGTLSIQRGIEVGHVFYLGKKYSEALKATFLDETGKPAVLEMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+V A IE +HD +GIIWP ++APF++ + + + RD +K+Y L Sbjct: 447 YGIGVTRIVGAAIEQNHDARGIIWPRAIAPFEVVICPVGWGKSETVRDTAQKLYESLLAR 506 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD + G FA +L+G PL+V VG + ++D VE++ R + +E + Sbjct: 507 GVDVILDDRDARPGVMFAEWELIGAPLRVTVGERGLNDGVVELQARRETEAAKIPVESAL 566 Query: 436 NYASHRFSN 444 + Sbjct: 567 EAVLTKLDT 575 >gi|222528589|ref|YP_002572471.1| prolyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725] gi|254782881|sp|B9MPD7|SYP_ANATD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|222455436|gb|ACM59698.1| prolyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725] Length = 572 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 121/265 (45%), Positives = 160/265 (60%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F+P L+E P DAEI SHKLMLR+G + Q S GIY +LPLG + L + I+REE Sbjct: 1 MKVSELFMPTLKETPSDAEIESHKLMLRSGFMRQLSSGIYVYLPLGYRVLRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ + L +LW ESGR+ +G EM R+ DRN++ GPTHEE T I R+ Sbjct: 61 MDRSGAQEVHMSALMPKELWEESGRWAVFGPEMFRIKDRNEREYCLGPTHEEAFTYIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR+LP YQIQ KFRDE RPRFGVMR REF MKDAYSFD+ G SY KM+ + Sbjct: 121 EISSYRDLPKILYQIQTKFRDERRPRFGVMRCREFTMKDAYSFDIDENGLDISYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+RIF R GL + A++G +GG SHEF+V + GE ++ K + D Sbjct: 181 YVRIFKRCGLDVKIVEADTGAMGGASSHEFMVPSSVGEAEIAYCKACGYAANLEKAECLD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 + + ++ Y E Sbjct: 241 EPVENKEEPKEKQEVYTPNVRTIEE 265 Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 68/189 (35%), Positives = 103/189 (54%), Gaps = 4/189 (2%) Query: 261 DVHNEKLFDSLPEN---KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ N D P+ K RGIEVGHIF GTKY+ + + G+ + MG Y Sbjct: 380 DLRNITQDDLCPKCRSQKVTIERGIEVGHIFKLGTKYTQAFNCVYTDEKGEKKLMIMGCY 439 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R AA+IE HD GIIWP +VAP+++ ++ + D+ + +IY L + G Sbjct: 440 GIGINRTAAAIIEQMHDEDGIIWPITVAPYEVIIVPVNVKDENQKKIAFEIYENLQRNGV 499 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V DD E+ G +F ADL+G P +V VG K +S+ K+EI++R T ++ +E+ I Sbjct: 500 EVLIDDRDERAGVKFKDADLIGIPFRVTVGKK-ISEGKLEIRNRRTKESFEVEIEKAIEV 558 Query: 438 ASHRFSNNR 446 + + Sbjct: 559 VINLIREEK 567 >gi|325915741|ref|ZP_08178043.1| prolyl-tRNA synthetase, family II [Xanthomonas vesicatoria ATCC 35937] gi|325538005|gb|EGD09699.1| prolyl-tRNA synthetase, family II [Xanthomonas vesicatoria ATCC 35937] Length = 564 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 155/235 (65%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 1 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR++ +G ++L+++DR + Y PT EE D R Sbjct: 61 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKISDRKQQEFCYSPTAEEAAADFARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT Y+ M + Sbjct: 121 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDADMAREYDNMRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL+ ++A+SG IGGD S EF V+AD+GE + D+ E Sbjct: 181 YTRIFTRLGLEFRAVQADSGAIGGDASQEFHVIADSGEDSLAF-STASDYAANVE 234 Score = 96.0 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 1/166 (0%) Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 + ARGIEVGH+F G++Y+ + AT GK ++MG YGIG R+VAA IE +H Sbjct: 397 GELRLARGIEVGHVFQLGSQYAQALQATVIDESGKPAVLKMGCYGIGISRIVAAAIEQNH 456 Query: 334 DGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 D GI+WP +AP+++ + I D A + + L G D DD G + G+ F Sbjct: 457 DDAGILWPAPMAPWQVVVCVINPKQDAQVVAAAQALLDELLAAGLDAALDDRGLRPGAMF 516 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 A +LLG P +V+V + ++ E + R E++ + + Sbjct: 517 ADMELLGIPHRVVVSERGLAAGTFEYRARTAEAAENLDKAGLFSRL 562 >gi|144899402|emb|CAM76266.1| Threonyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1] Length = 638 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 72/438 (16%), Positives = 150/438 (34%), Gaps = 40/438 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD ++ L + + + G W G V + +R Sbjct: 233 YLHMLEEAEKRDHRRLGREMNLF--HLQEEAVGAVFWHQKGWALYRTVESYMRNRLEAEN 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L LW SG D + + M + ++++ + P + IFR IKSY Sbjct: 291 YQEVKTPQLVDFSLWEASGHADKFSESMFTIKTQDERHLAVKPMNCPCHVQIFRQGIKSY 350 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R E G+MR R F DA+ F + + + + Sbjct: 351 RDLPLRMAEFGSCHRYEPSGALHGIMRVRAFTQDDAHIFCTEDQITSETIAF-CQLLKLV 409 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + ++ P S E D + Sbjct: 410 YQDFGFTDVRVKFSDRPEKRAGSDE-----------------TWDKAESALLAAAQAAGL 452 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ A Y + L D++ + + ++ F + + A++ Sbjct: 453 ETTLNPGEGAFYGPKLEF---VLRDAIGRDWQCGTLQVD----FVLPER----LDASYTA 501 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + +G+ ++ + G+ +W + +++ D Sbjct: 502 EDGSRRRPVMLHRAVLGSFERFIGILIENFAGRFPLWLSPIQVVVATIV------SDADD 555 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + A+L G V D E+I + A P+ ++VG + + V ++ + Sbjct: 556 YAQSVAAKLRGAGLRVETDLRNEKINKKVAEHSNAKVPVLLVVGRREAEEGTVAVRRLGS 615 Query: 424 GIREDMSLEEVINYASHR 441 +E ++L++ + + Sbjct: 616 QGQEFLALDQALATLVNE 633 >gi|301300332|ref|ZP_07206537.1| threonine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852068|gb|EFK79747.1| threonine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 649 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 150/443 (33%), Gaps = 37/443 (8%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 L +E RD + ++L L + + G+ W+P G + I +++ G Sbjct: 235 LQRQKEARERDHRVIGNELDLF--FVDPKVGAGLPYWMPNGATIRRVIERYIIDKEVAWG 292 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKS 124 + P L + L+ +SG +D Y ++M D D M P + ++ H +S Sbjct: 293 FQHVYTPVLANLSLYKQSGHWDHYREDMFPPMDMGDGEMLELRPMNCPSHIQVYNHHKRS 352 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR LP ++ + R E + + + + P+ + + + Sbjct: 353 YRELPLRIAELGMMHRYEKSGALTGLSRVREMTLNDGHDFIEPDHIEDEIKTLIKLMTEV 412 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS-ENTDFDDII 243 ++ + R D T+ + D M S DD+ Sbjct: 413 YNDFDITDYRFRLS--------------YRDPKNTEKYFDDDEMWEKSQSKLKAAMDDMG 458 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 E A Y DV + +L + +S ++ F ++ + Sbjct: 459 LEYFEAEGEAAFYGPKIDVQTKT---ALGGEETLSTIQLD----FLLPERFD----LKYI 507 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 GADG++H + + M A + + G W + I + + Sbjct: 508 GADGEEHRPVMVHRGIVSTMERFTAYLTEMYKGAFPTWLAPHQ-----VDIIPVKNDLHM 562 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D + ++L G V DD E++G + A + P +++G + VS+ V ++ Sbjct: 563 DYVNDLSSKLRAHGIRVTVDDRNEKMGYKIRQAQVNKIPYTLVIGDEEVSNGTVTVRKYG 622 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 M+ E N N Sbjct: 623 EEKTNTMTKAEFKNLLFEDIENY 645 >gi|253583421|ref|ZP_04860619.1| proline-tRNA ligase [Fusobacterium varium ATCC 27725] gi|251833993|gb|EES62556.1| proline-tRNA ligase [Fusobacterium varium ATCC 27725] Length = 569 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 131/297 (44%), Positives = 180/297 (60%), Gaps = 23/297 (7%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AE ASHKL+LR GMI + + G+Y++LPLG KAL V I+REE Sbjct: 1 MRFSKSYIKTLKETPKEAETASHKLLLRAGMIKKLTSGVYTYLPLGYKALRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR G+ E+ +P LQ A+LW ESGR+D G M++L DRN + + GPTHEEV+TD+ R+ Sbjct: 61 MNRAGSQEILMPVLQPAELWKESGRWDVMGPLMMKLQDRNKRDFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP + YQIQ KFRDE+RPRFG+MR REF+MKD YSF T E + M + Sbjct: 121 DISSYKSLPLSLYQIQTKFRDEIRPRFGLMRGREFVMKDGYSFHATVESLDEEFLNMRDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI-------- 232 Y RIF R GLK P+ A+SG IGG S EF VLAD+GE ++ Sbjct: 181 YSRIFSRCGLKFRPVEADSGAIGGSGSQEFHVLADSGEDEIIYCDSCSYAANVETAVSKV 240 Query: 233 ---------PSENTDFDDIISLNSIVEQWTAPYAATS------DVHNEKLFDSLPEN 274 +E D ++ ++ IV+ PY+ T D+ N++++ L Sbjct: 241 EAAPKEEIKNAELIDTPNVAKIDDIVQFLNIPYSKTVKAMMYRDMGNDQVYMVLIRG 297 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 70/189 (37%), Positives = 102/189 (53%), Gaps = 3/189 (1%) Query: 259 TSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +DV K ++ K SARGIEVGHIF G KYS M+ATF G+ + MG Sbjct: 382 VADVKTVKAGETCERCGGKLHSARGIEVGHIFKLGDKYSKAMNATFLDDKGESKVMIMGC 441 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R +A+ IE ++D GIIWP ++AP+ + +I ++ E+IY L G Sbjct: 442 YGIGVSRTLASAIEQNNDEFGIIWPTALAPYIVDVIPANIKNEEQVKVAEEIYEALLNDG 501 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + DD E+ G +F ADL+GFP +V+ G K + VE+K R TG ++S ++V++ Sbjct: 502 IEAMIDDRDERPGFKFKDADLIGFPFKVVSGKK-AGEGIVELKIRRTGETIELSKDDVVS 560 Query: 437 YASHRFSNN 445 Sbjct: 561 TVRELMKKY 569 >gi|297623866|ref|YP_003705300.1| threonyl-tRNA synthetase [Truepera radiovictrix DSM 17093] gi|297165046|gb|ADI14757.1| threonyl-tRNA synthetase [Truepera radiovictrix DSM 17093] Length = 665 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 80/443 (18%), Positives = 152/443 (34%), Gaps = 37/443 (8%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L + T + G+ WLP G ++ + + +E + R G Sbjct: 241 LWRLEEAKKRDHRKLGAELEIFT-LDDDIGPGLPLWLPRGAVIVEEIEKLAKEMERRAGY 299 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 ++ P + L+ SG Y + M + ++ P + IF + +SYR Sbjct: 300 QQVRTPHVTKEQLFTRSGHLPYYAESMFPPMELDNVRYYLKPMNCPFHHKIFAARPRSYR 359 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP + +R E G+MR R M DA+ + TPE + + + YL F Sbjct: 360 ELPLRLAEYGTCYRYEDHGALMGLMRVRSMQMNDAHIYC-TPEQFEDEFMGVIALYLEYF 418 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G++ MR + G + + + + + + + Sbjct: 419 RLFGIRDYVMRLS-------------KHSRAGLGKKYVNNPELWEQTEAMVRGALERGGI 465 Query: 246 NSI-VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 N I VE A Y DV +++ + ++ ++ FG + Sbjct: 466 NFIEVEDEAAFYGPKIDV---QIYSVIGREFTLATNQVDFAVPARFG--------LEYVA 514 Query: 305 ADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG + R+V ++E + Sbjct: 515 EDGSRKTPLCLHRAPLSTHERLVGFLLEHFAGDFPLWLAPEQVRVVPIA-------DRHN 567 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + + ARL++ G D GE++ ++ A+LL P VIVG K V + + R Sbjct: 568 AYAQSLKARLAEAGLRAEADLRGERMNAKVRDAELLKVPYTVIVGDKEVEAGALSFRSRK 627 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 ++ +S+E + + Sbjct: 628 EPEQKGVSVEAFVAHLQAHVGAR 650 >gi|217077729|ref|YP_002335447.1| threonyl-tRNA synthetase [Thermosipho africanus TCF52B] gi|217037584|gb|ACJ76106.1| threonyl-tRNA synthetase [Thermosipho africanus TCF52B] Length = 636 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 78/426 (18%), Positives = 153/426 (35%), Gaps = 43/426 (10%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +L +L+E RD KL L I+ + G+ +LP G L+ + + R+ Sbjct: 232 YLKMLEEAKKRDHRKLGPKLGLF--FINTDVAAGMPIFLPKGATILNELMSFSRQLHKEY 289 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + + LW +SG +D Y M ++ + P + I+++ + S Sbjct: 290 GYKEVMTPLIMNVKLWHQSGHWDHYKDNM-YFTEKEETEYAVKPMNCPGHILIYKNDVVS 348 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ R E G++R R F DA+ F + + V + Sbjct: 349 YRDLPIRLFEFGKVHRYERSGVLHGLLRVRAFTQDDAHIFCRQDQIEEE--VSSVVRLID 406 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ + + P E + + +DI Sbjct: 407 ELYKPFGFTYRATLSTMPEDHMGDEE-----------------TWEKATNALKKVLEDIK 449 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E A Y D H + DSL + + ++ F ++ + Sbjct: 450 LDFDIAEGEGAFYGPKVDFH---VKDSLGREWQCATIQLD----FQMPERFD----LKYV 498 Query: 304 GADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG + V + + G++ ++ + +P ++P ++ ++ + Sbjct: 499 DKDGIEKRPVMIHTAKYGSLERFFGILI---EHYAGAFPLWISPVQVLVLPVSDK---YI 552 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D +K+ LS+ V D E +G + A + P +IVG K+ ++ R Sbjct: 553 DYAKKVARLLSESNIRVEVDSRNETLGYKIREAQISKVPYMIIVGENEEKSGKISVRSRD 612 Query: 423 TGIRED 428 +D Sbjct: 613 GVEEKD 618 >gi|139948914|ref|NP_001077356.1| probable prolyl-tRNA synthetase, mitochondrial isoform 2 [Mus musculus] gi|159575933|emb|CAP19280.1| prolyl-tRNA synthetase (mitochondrial)(putative) [Mus musculus] Length = 511 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 146/456 (32%), Positives = 225/456 (49%), Gaps = 46/456 (10%) Query: 3 RSKYFLPI-LQENP--------RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNV 53 S+ F P L+E+ D S +LML+ G+I S G Y +P +A++ + Sbjct: 78 LSRMFQPQNLREDQVLSLEGRASDLTCKSQRLMLQVGLILPASPGCYHLMPYTVRAVEKL 137 Query: 54 NAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEV 113 +I +E G ++++P+L A+LW + R+D G+E+LRL DR+ K GPTHEE Sbjct: 138 VRVIDQEMQAIGGQKINMPSLSPAELWRATSRWDLMGRELLRLRDRHGKEYCLGPTHEEA 197 Query: 114 MT-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKH 172 +T + SY+ LP YQ+ KFRDE RPRFG++R REF MKD Y+FD + E ++ Sbjct: 198 VTALVASQKKLSYKQLPLLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSSEAAQE 257 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 +Y + +Y R+F RLGL+ + RA+ G IGG +SHEF + D GE ++ Sbjct: 258 TYGLVCDAYCRLFDRLGLQWMKARADVGSIGGTMSHEFQLPVDIGEDRLVVCPSC----- 312 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 A T + + + +GIEVGH FY T Sbjct: 313 ---------------------HFSANTEILDLSQKICPDCQGPLTETKGIEVGHTFYLST 351 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 KYS +A F A G+ +MG YG+G R++AA IE I WP +AP+++ +I Sbjct: 352 KYSSIFNALFTNAHGESLLAEMGCYGLGVTRILAAAIEVLSTEDCIRWPRLLAPYQVCVI 411 Query: 353 NIKA--HDQVCRDACEKIYARLSKV-----GCDVFWDDMGE-QIGSQFAVADLLGFPLQV 404 K + + EK+Y + + G +V DD IG++ A+ LG+P + Sbjct: 412 PPKKGSKETAATEIVEKLYDDIMEAVPQLRG-EVLLDDRTHLTIGNRLKDANKLGYPFVI 470 Query: 405 IVGSKFVSDSK-VEIKHRLTGIREDMSLEEVINYAS 439 I G + + D E+ + TG ++ E V+ + Sbjct: 471 IAGKRALEDPAHFEVWSQNTGEVVFLTKEGVMELLT 506 >gi|134299814|ref|YP_001113310.1| prolyl-tRNA synthetase [Desulfotomaculum reducens MI-1] gi|172044305|sp|A4J5Y2|SYP_DESRM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|134052514|gb|ABO50485.1| prolyl-tRNA synthetase [Desulfotomaculum reducens MI-1] Length = 569 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 113/252 (44%), Positives = 162/252 (64%), Gaps = 1/252 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +AE+ SH+L+LR G I + + G+Y++LPL Q+ L + IIREE Sbjct: 1 MRVSQMLVPTLREVPAEAEVVSHQLLLRAGFIRKTASGVYTYLPLAQRVLKKLRQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G E+ +P +Q A++W+ESGR+ YG E+ RL DR+D+ GPTHEEV+T + R Sbjct: 61 IDKQGGQELLMPIIQPAEMWLESGRWHVYGPELFRLKDRHDRNFCLGPTHEEVITILIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ +P YQIQ K+RDE RPRFG++R REF+MKD YSFD G SY KM + Sbjct: 121 EVRSYKQMPLLLYQIQNKYRDERRPRFGLLRGREFIMKDLYSFDRDEAGLDISYQKMHEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R G+K P+ A+SG IGG +HEF+VLA++GE + D D+ E Sbjct: 181 YTSIFSRCGVKFRPVEADSGAIGGSSTHEFMVLAESGEAAILYCSDC-DYAANVEKATTL 239 Query: 241 DIISLNSIVEQW 252 L+ ++Q Sbjct: 240 PAAGLDPAIQQL 251 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 69/186 (37%), Positives = 108/186 (58%), Gaps = 2/186 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 D+ K + P+ + ARGIEVG IF GTKYS + ATF +GK+ + MG Sbjct: 381 VEDIRMVKAGEPCPKCGAQLLEARGIEVGQIFKLGTKYSKALGATFLDENGKEQPIVMGC 440 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R +AA IE ++D GIIWP S+AP++ +I + D E++Y L++ G Sbjct: 441 YGIGVSRTMAAAIEQNYDKDGIIWPASIAPYQAIVIPVAPKDDNQMKIAEELYKALNQAG 500 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + DD E+ G +F ADL+G+PL+++VG+K V++ VEI+ R +G + +S+++ + Sbjct: 501 VETILDDRSERPGVKFKDADLIGYPLRIVVGNKAVTEGVVEIRQRRSGQTDLVSVKDSVP 560 Query: 437 YASHRF 442 Sbjct: 561 KILEIL 566 >gi|145219006|ref|YP_001129715.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265] gi|189083618|sp|A4SCK4|SYT_PROVI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|145205170|gb|ABP36213.1| Ser-tRNA(Thr) hydrolase [Chlorobium phaeovibrioides DSM 265] Length = 666 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 81/452 (17%), Positives = 153/452 (33%), Gaps = 40/452 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K L L+E RD +L L + + G+ WLP G + + ++EE Sbjct: 237 KLLKAHLSALEEAKKRDHRKLGTELELFM-LSPEIGSGLPVWLPKGAIIRQELESFLKEE 295 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-----MIYGPTHEEVMT 115 Q R G + + P + + DL+ SG Y Y +D+ + P + Sbjct: 296 QRRRGYLPVYTPHIGNIDLYKRSGHYPYYSDSQFPPLTYHDEEGKAEQYLLKPMNCPHHH 355 Query: 116 DIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSY 174 I+ S ++SYR+LP + +R E G++R+R F D++ + + Sbjct: 356 LIYSSKMRSYRDLPVRLAEFGTVYRHEQSGELNGLVRARGFTQDDSHIYCRPDQLVDE-I 414 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS 234 +F LG + R + ++ + D + Sbjct: 415 CNAIDLTRYVFATLGFTEVETRLS-------------MHDPLNPSKYGGTADVWEQAEKD 461 Query: 235 ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY 294 D + I + Y D + D+L ++ ++ Sbjct: 462 VREAADRMKINYFIGVGEASFYGPKIDFI---VRDALGRKWQLGTVQVDYVMP------- 511 Query: 295 SLPMSATFKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 ++ G+DG+ H + G+M V+ G +W V + + Sbjct: 512 -ERFDLSYVGSDGQKHRPIVIHRAPFGSMERFIGVLIEHTAGNFPLWLAPVQAVVLPIA- 569 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 + D ++ + + G V D E+IG + A+L P VIVG K Sbjct: 570 -----EDVHDYGSEVRDAMHRAGIRVELDVRNEKIGRKIREAELAKIPFMVIVGQKEKEG 624 Query: 414 SKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V ++ G S++E+ + + Sbjct: 625 GSVSLRRHRIGDEGAFSIQEMTEKLLNEIAAK 656 >gi|153009484|ref|YP_001370699.1| threonyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188] gi|151561372|gb|ABS14870.1| threonyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188] Length = 661 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 80/445 (17%), Positives = 151/445 (33%), Gaps = 40/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD ++ L + G+ W G K N+ + +R + Sbjct: 236 QAYLHMLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 293 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 294 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDETDDDRVFALKPMNCPGHVMIF 353 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F + + Sbjct: 354 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRIN 413 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G + I ++ + P S E A++ V E Sbjct: 414 -DLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMSVL------------EKI 460 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I+ A Y + L D++ + ++ FG Sbjct: 461 QQQSNNIKTGILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------ 511 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + D + + G+M ++ + G +W V ++ Sbjct: 512 --AFYIDKDSEKRQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATIT---- 565 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + A+L G V D E+I + L P+ ++ G + ++ V Sbjct: 566 --SDADEYAAQAAAKLKAAGLQVSTDLRNEKINYKVREHSLQKVPVILVCGKREAEENTV 623 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + +E M+L+E I Sbjct: 624 NMRRLGSRDQESMTLDEAIARLVEE 648 >gi|307257929|ref|ZP_07539683.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863576|gb|EFM95505.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 571 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 122/243 (50%), Positives = 158/243 (65%), Gaps = 1/243 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHVDKASLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V DF E + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDFAANIELAEAV 239 Query: 241 DII 243 + Sbjct: 240 AVG 242 Score = 179 bits (455), Expect = 6e-43, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 112/207 (54%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPM 298 D ++ + A +D+ N D P+ K V RGIEVGHIF GTKYS M Sbjct: 364 DGKHYFNVNWERDAAMPEVADLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 AT +G DGK + MG YGIG RVVAA IE HD + I D +APF ++++ + Sbjct: 424 KATVQGEDGKPLVMTMGCYGIGVTRVVAAAIEQHHDDRGIIWPSDEIAPFTVAIVPMNMH 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + E++Y L G DV +DD E+ G FA +L+G P V++G K +++ ++ Sbjct: 484 KSESVQQFSEELYRTLKAQGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K+R TG ++ ++ ++++ + Sbjct: 544 EYKNRRTGEKQMIAKDQLLAFLKENVK 570 >gi|190151185|ref|YP_001969710.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307264534|ref|ZP_07546118.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|226731421|sp|B3GZ82|SYP_ACTP7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|189916316|gb|ACE62568.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870133|gb|EFN01893.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 571 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 122/243 (50%), Positives = 158/243 (65%), Gaps = 1/243 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHVDKASLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V DF E + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDFAANIELAEAV 239 Query: 241 DII 243 + Sbjct: 240 AVG 242 Score = 177 bits (448), Expect = 4e-42, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 4/197 (2%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + +D+ N D P+ K V RGIEVGHIF GTKYS M AT +G DGK Sbjct: 374 ERDVAMPEVADLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSEAMKATVQGDDGK 433 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA-HDQVCRDACE 366 + MG YGIG RVVAA IE HD + I D +APF ++++ + + + E Sbjct: 434 PLVMTMGCYGIGVTRVVAAAIEQHHDERGIIWPSDEIAPFTVAIVPMNMHKSESVQQFSE 493 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 ++Y L G DV +DD E+ G FA +L+G P V++G K +++ ++E K+R TG + Sbjct: 494 ELYRTLKAQGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEK 553 Query: 427 EDMSLEEVINYASHRFS 443 + ++ ++++ + Sbjct: 554 QMIAKDQLLAFLKENVK 570 >gi|165977268|ref|YP_001652861.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|226731422|sp|B0BT03|SYP_ACTPJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|165877369|gb|ABY70417.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 571 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 121/243 (49%), Positives = 157/243 (64%), Gaps = 1/243 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQ Q KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQTQTKFRDEVRPRFGVMRSREFVMKDAYSFHVDKASLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V DF E + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDFAANIELAEAV 239 Query: 241 DII 243 + Sbjct: 240 AVG 242 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 111/207 (53%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPM 298 D ++ + +D+ N D P+ K V RGIEVGHIF GTKYS M Sbjct: 364 DGKHYFNVNWERDVAMPEVADLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 AT +G DGK + MG YGIG RVVAA IE HD + I D +APF ++++ + Sbjct: 424 KATVQGEDGKPLVMTMGCYGIGVTRVVAAAIEQHHDERGIIWPSDEIAPFTVAIVPMNMH 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + E++Y L G DV +DD E+ G FA +L+G P V++G K +++ ++ Sbjct: 484 KSESVQQFSEELYRTLKAQGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K+R TG ++ ++ ++++ + Sbjct: 544 EYKNRRTGEKQMIAKDQLLAFLKENVK 570 >gi|298206753|ref|YP_003714932.1| threonyl-tRNA synthetase [Croceibacter atlanticus HTCC2559] gi|83849384|gb|EAP87252.1| threonyl-tRNA synthetase [Croceibacter atlanticus HTCC2559] Length = 648 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 76/436 (17%), Positives = 152/436 (34%), Gaps = 36/436 (8%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L T + +G+ WLP G + + +++ Q + G + P Sbjct: 238 AKRRDHRKLGKELSLFT-FSQKVGQGLPLWLPKGAALRERLENFLKKAQKKAGYEMVVTP 296 Query: 73 TLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 + +L+V SG Y YG++ + + + P + +I+ + SYR+LP Sbjct: 297 HIGQKELYVTSGHYAKYGEDSFQPISTPAEGEEFLLKPMNCPHHCEIYNNSPWSYRDLPK 356 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + + +R E G+ R R F DA+ F TP+ + K+ + +F LG Sbjct: 357 RYAEFGTVYRYEQSGELHGLSRVRGFTQDDAHIFC-TPDQLDEEFKKVIDLTMYVFSSLG 415 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 ++ + + ++ + + + D + Sbjct: 416 FENFTTQVSLRD-------------PENPDKYIGKEENWEKAENAILSAVKDKGLNYIVE 462 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D + D+L + ++ ++ T+KG+D + Sbjct: 463 TGEAAFYGPKLDFM---VKDALGRSWQLGTIQVDYNLP--------ERFDLTYKGSDNEL 511 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 H + G+M A++ G +W +SL + + +K+ Sbjct: 512 HRPVMIHRAPFGSMERFVAILLEHTAGNFPLWLMPEQAIILSL------SEKYENYSKKV 565 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 L D E +G + A++ P +IVG + +D V ++ Sbjct: 566 LNLLENHEIRALTDHRSETMGKKIREAEVNKIPYMLIVGEQEENDGTVSVRKHGGEDLGT 625 Query: 429 MSLEEVINYASHRFSN 444 M++EE + S Sbjct: 626 MTVEEFSKLVNEEISK 641 >gi|224541524|ref|ZP_03682063.1| hypothetical protein CATMIT_00694 [Catenibacterium mitsuokai DSM 15897] gi|224525561|gb|EEF94666.1| hypothetical protein CATMIT_00694 [Catenibacterium mitsuokai DSM 15897] Length = 585 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 75/441 (17%), Positives = 156/441 (35%), Gaps = 34/441 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L + KG+ WLP G ++ I ++ G Sbjct: 172 LQLLEEAKERDHRKLGKELGIFM-FADIVGKGLPMWLPNGFTVRRLLSDYIMNKELELGY 230 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P+L + L+ +SG + Y +M + +D+A + P + +++S + SYR Sbjct: 231 EHVMTPSLGNVKLYKKSGHWAHYKDDMFPAMELDDEAYVLRPMNCPHHMVMYKSTLHSYR 290 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP +I FR E G+ R+R F D++ F + ++ + + L ++ Sbjct: 291 DLPVRIAEIANDFRFEASGALTGIERARAFTQNDSHIFCRPDQIAQE-FKNVAHLILDVY 349 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G K R + F + + + ++ Sbjct: 350 KDFGFKDYSFRLSLRDKNNKE-------------KYFGNDELWEKSENELREVLKEMDVE 396 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y DV ++ +L + +S ++ T+ Sbjct: 397 FYEAEGEAAFYGPKLDV---QVKSALGHDVTLSTIQLDYQLP--------ERFELTYVDE 445 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 +G V + +G++ A + G +W + I + + Sbjct: 446 NGDKVRPVVIHRAILGSLDRFIAFLLEETKGNLPLWLA-----PTQVQVIPVKLEYHDEY 500 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ A+L K V D+ E++G + A L P Q+++G + V + Sbjct: 501 AKEVVAKLRKAHFRVNNDNRDEKLGYRIREAQLKKIPYQLVLGDNERDNGTVTYRKHGEK 560 Query: 425 IREDMSLEEVINYASHRFSNN 445 + ++ +E + + N Sbjct: 561 KQTTVTFDEFVELLNTEVENK 581 >gi|310779485|ref|YP_003967818.1| prolyl-tRNA synthetase [Ilyobacter polytropus DSM 2926] gi|309748808|gb|ADO83470.1| prolyl-tRNA synthetase [Ilyobacter polytropus DSM 2926] Length = 570 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 121/246 (49%), Positives = 163/246 (66%), Gaps = 1/246 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S ++ L+E P+DAE+ SHKLMLR GMI + + G+Y++LPLG KAL V I+REE Sbjct: 1 MKFSNLYVKTLKETPKDAEVISHKLMLRAGMIKKLASGVYTYLPLGYKALRKVEKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G+ E+ +P LQ +++W ESGR+D+ G EM+R+ DR+D+ + GPTHEEV+TDI R+ Sbjct: 61 MERAGSQEIFMPVLQPSEIWQESGRWDTMGPEMMRIKDRHDREFVLGPTHEEVITDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP YQIQ KFRDE RPRFG+MRSREFLMKDAYSF + E + + M + Sbjct: 121 DISSYKSLPMNLYQIQTKFRDERRPRFGLMRSREFLMKDAYSFHASEECLDNEFENMKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK + A+SG IGG S EF VLA++GE ++ + E + Sbjct: 181 YTRIFERCGLKFRSVEADSGAIGGSGSQEFHVLAESGEDEIIYCDSC-GYAANLEKAESV 239 Query: 241 DIISLN 246 I Sbjct: 240 AFIPEY 245 Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 72/187 (38%), Positives = 100/187 (53%), Gaps = 3/187 (1%) Query: 261 DVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ K + P SARGIE GH+F GTKYS M ATF +GK + + MG YG Sbjct: 385 DIRTVKKDEGCPRCSGTLSSARGIETGHVFKLGTKYSESMKATFLDVNGKSNVMMMGCYG 444 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R AA IE ++D GIIWP ++AP+ + ++ ++ EKIY L + G D Sbjct: 445 IGVSRTTAAAIEQNYDENGIIWPSAIAPYVVDVVPANMKNKDQVALGEKIYTELLEAGID 504 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 DD E+ G +F ADL+GFP +V+ G + ++ +EIK R TG D+ EEV+ Sbjct: 505 TVLDDRNERPGFKFKDADLIGFPFKVVSGKQ-AAEGIIEIKIRKTGETLDVKSEEVVTTI 563 Query: 439 SHRFSNN 445 Sbjct: 564 KELMKKY 570 >gi|317153730|ref|YP_004121778.1| threonyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2] gi|316943981|gb|ADU63032.1| threonyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2] Length = 645 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 84/440 (19%), Positives = 151/440 (34%), Gaps = 40/440 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K+ + + RD +L L + G+ W P G + R+E Sbjct: 227 LKKHLDRLEEARKRDHRKLGVQLDLFSTH-EDVGGGMILWHPKGGLIRTILEDFERKEHL 285 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G + P + +LW +SG YD+Y + M + ++++ P + IF+ I Sbjct: 286 KRGYQIVQGPLILKRELWEKSGHYDNYRENM-YFTEIDEQSYGIKPMNCLSHMLIFKRKI 344 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP ++++ + R E G+MR R F DA+ + Sbjct: 345 QSYRDLPQRYFELGVVHRHEKSGVLHGLMRVRSFTQDDAHLICRPDQLQTEIIGVFNFV- 403 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I G EF T + + + + D Sbjct: 404 ------------------RDIMGLFGFEFEAEISTRPEKSVGTDADWELATAALKDALDA 445 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + ++ E A Y D+ L DSL + + + F ++ Sbjct: 446 LGKPYTVNEGDGAFYGPKIDII---LRDSLDRRWQCATIQCD----FTLPDRFD----LV 494 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G DG+ H + +G++ V+ G +W V +++ Sbjct: 495 YVGEDGERHRPVMLHRVILGSIERFIGVLIEHFAGALPVWLAPVQARLLNVT------DA 548 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + EK A L+ G V D E++G + A + P ++VG K V V I+ Sbjct: 549 QGEFTEKARAYLAGRGIRVEADTRNEKLGYKVREAQVEKIPYMLVVGDKEVEAGCVNIRS 608 Query: 421 RLTGIREDMSLEEVINYASH 440 R ++LEE Sbjct: 609 RDGDDPGLVTLEEAAQLILD 628 >gi|115475758|ref|NP_001061475.1| Os08g0295300 [Oryza sativa Japonica Group] gi|38175524|dbj|BAD01219.1| putative threonyl-tRNA synthetase [Oryza sativa Japonica Group] gi|38175707|dbj|BAD01414.1| putative threonyl-tRNA synthetase [Oryza sativa Japonica Group] gi|113623444|dbj|BAF23389.1| Os08g0295300 [Oryza sativa Japonica Group] gi|215687347|dbj|BAG91912.1| unnamed protein product [Oryza sativa Japonica Group] Length = 745 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 78/446 (17%), Positives = 159/446 (35%), Gaps = 38/446 (8%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R +Y + + RD + L HQ S G +LP G + + +R++ Sbjct: 337 RLKEYKHLLEEAKKRDHRLLGQTQDLF--FFHQLSPGSCFFLPHGAIIYNKLMDFLRQQY 394 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G E+ P + + LW SG +Y + M + + + P + +F Sbjct: 395 RDRGYQEVLSPNIYNMQLWETSGHAANYKENMF-VFEIEKQEFGLKPMNCPGHCLMFEHR 453 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP + R+EL G+ R R F DA+ F K + Sbjct: 454 VRSYRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCR-ESQIKDEVKAVLDF 512 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++ G K + + P E + + Sbjct: 513 INYVYEIFGFKYE-LELSTRPEKYLGDIE-----------------TWNKAEQQLTEALN 554 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I E A Y D+ +FD+L + + ++ F ++ L SA Sbjct: 555 EFGKPWQINEGDGAFYGPKIDIG---VFDALKRKFQCATLQLD----FQLPLRFKLTYSA 607 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + V + +G++ + A++ + WP ++P + + +I ++ Sbjct: 608 E--DEAKLERPVMIHRAILGSVERMFAILL---EHYNGKWPLWLSPRQAIVCSISSNS-- 660 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + +++ AR+ + G V D+ I + A L F ++VG++ +V ++ Sbjct: 661 -VEYAKQVRARIHEAGFHVAIDETDRTIQKKVREAQLAQFNYILVVGAQEAETGQVSVRV 719 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R +S++++I + + Sbjct: 720 RDKAELATVSIDDIITRFKEEVAAYK 745 >gi|307262323|ref|ZP_07543971.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306867986|gb|EFM99814.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 571 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 122/243 (50%), Positives = 158/243 (65%), Gaps = 1/243 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHVDKASLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V DF E + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDFAANIELAEAV 239 Query: 241 DII 243 + Sbjct: 240 AVG 242 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 111/207 (53%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPM 298 D ++ + +D+ N D P+ K V RGIEVGHIF GTKYS M Sbjct: 364 DGKHYFNVNWERDVAMPEVADLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 AT +G DGK + MG YGIG RVVAA IE HD + I D +APF ++++ + Sbjct: 424 KATVQGEDGKPLVMTMGCYGIGVTRVVAAAIEQHHDERGIIWPSDEIAPFTVAIVPMNMH 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + E++Y L G DV +DD E+ G FA +L+G P V++G K +++ ++ Sbjct: 484 KSESVQQFSEELYRTLKAQGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K+R TG ++ ++ ++++ + Sbjct: 544 EYKNRRTGEKQMIAKDQLLAFLKENVK 570 >gi|33598297|ref|NP_885940.1| prolyl-tRNA synthetase [Bordetella parapertussis 12822] gi|81836505|sp|Q7W481|SYP_BORPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|33566855|emb|CAE39070.1| prolyl-tRNA synthetase [Bordetella parapertussis] Length = 576 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 122/233 (52%), Positives = 162/233 (69%), Gaps = 1/233 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P +AEIASH+LM R GMI + + GIY+++PLG K + + I+REE Sbjct: 1 MRASKYHLNTLKEAPAEAEIASHQLMTRAGMIRKLAGGIYTYMPLGLKVIRKIEGIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+ +P +Q A+LW+ESGR++ YG E+LR+ DR+ + + PT EEV+TDI R+ Sbjct: 61 MNAAGAIELLMPVVQPAELWMESGRWEQYGAELLRIKDRHQRDFVLQPTSEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD G++ SY+ M+ + Sbjct: 121 EIQSYRQLPLNFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDEAGAQRSYDIMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y RIF RL L+ + A++G IGG SHEF V+ADTGE + + D+ Sbjct: 181 YQRIFQRLSLEFRAVAADTGSIGGSRSHEFQVIADTGEDLIVYN-PESDYAAN 232 Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats. Identities = 66/188 (35%), Positives = 102/188 (54%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGH+F+ GTKYS + ATF +GK +QMG Sbjct: 387 VADLRNVVEGDPSPDGKGALSIQRGIEVGHVFFLGTKYSEALKATFLDDNGKPAVLQMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+V A IE +HD +GIIWP ++AP+++ + + + RD +Y L Sbjct: 447 YGIGVTRIVGAAIEQNHDARGIIWPRAIAPYEVVICPVGWGKSETVRDTALALYEALRAR 506 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD + G FA +L+G PL+V VG + +++ VE++ R + +++ + Sbjct: 507 GVDVMLDDRDSRPGVMFAEWELIGVPLRVTVGERGLNEGVVELQARREAEAAKVPVDQAL 566 Query: 436 NYASHRFS 443 + Sbjct: 567 AQTLAKLD 574 >gi|329577159|gb|EGG58629.1| threonine--tRNA ligase [Enterococcus faecalis TX1467] Length = 412 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 75/439 (17%), Positives = 157/439 (35%), Gaps = 33/439 (7%) Query: 10 ILQENPRDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + RD +L L M+ + G+ WLP G + I +++ G Sbjct: 2 REEAKERDHRKLGKELDLF--MVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQH 59 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRN 127 + P + +L+ SG +D Y ++M D D M + P + ++++ I SYR Sbjct: 60 VYTPIMADVELYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIHSYRE 119 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 LP ++ + R E ++ + + + P+ K + + + ++ Sbjct: 120 LPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYAD 179 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIISLN 246 + R D T + D M + D++ Sbjct: 180 FNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKAAMDELELDY 225 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y DV ++ +L + +S ++ F ++ T+ G D Sbjct: 226 FEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTYVGED 274 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 G++ + + + G + + + + +P +AP + ++I + + + Sbjct: 275 GENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV--EAHSEYAY 331 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 +I RL G V DD E++G + + P Q++VG K + D+ V ++ + Sbjct: 332 EIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKVPYQLVVGDKEMEDATVNVRRYGSKET 391 Query: 427 EDMSLEEVINYASHRFSNN 445 L I+ + N Sbjct: 392 SVEDLSIFIDSMAAEVHNY 410 >gi|325283002|ref|YP_004255543.1| threonyl-tRNA synthetase [Deinococcus proteolyticus MRP] gi|324314811|gb|ADY25926.1| threonyl-tRNA synthetase [Deinococcus proteolyticus MRP] Length = 650 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 75/446 (16%), Positives = 152/446 (34%), Gaps = 38/446 (8%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E R D +L L G+ WLP G + I + + + G Sbjct: 237 YLHLLEEAKRRDHRRLGKELDLF-FTSDVIGPGLPIWLPSGATIRRELERFIVDVELKNG 295 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P L ++L+ SG +D Y ++M + + + ++ P + I+ SY Sbjct: 296 YQHVYSPALAKSELYKISGHWDHYQEDMFPIMHLDQEELVLRPMNCPHHIQIYAHKPHSY 355 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP ++ +R E + G+ R R + DA+ F + + + + + Sbjct: 356 RELPLKIAELGTMYRYEQSGQLTGLSRVRSMTLNDAHIFCRPDQIQEE-FKAVVRMIQEV 414 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS-KDFMDFPIPSENTDFDDII 243 + LG K R D +T+ + D D+ Sbjct: 415 YEVLGFKDYSYRLSLR--------------DPQDTEKYYQDDQMWDTAEAQLREALSDLG 460 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 A Y DV ++ +L +++ +S ++ F K+ L A Sbjct: 461 VDYYESPGDAAFYGPKLDV---QVRSALGKDETISTAQLD----FLLPQKFDLEYVAE-- 511 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + R+ A +IE++ Sbjct: 512 DGSRQRPVMIHRGVISTMERMTAFLIENTAGNFPFWLAPRQVMIIPIA-------DRHNA 564 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR-- 421 E++ A L G D +++ ++ A+L P+ +IVG K V ++ R Sbjct: 565 YAEELRAELVAAGLRAEVDTSSDRMNAKVRDAELKKIPVMLIVGDKEQEARAVSVRERTP 624 Query: 422 -LTGIREDMSLEEVINYASHRFSNNR 446 R+ ++ ++ + R+ + + Sbjct: 625 EGHQERKGVAFSDLKSELVTRYQSRQ 650 >gi|297539468|ref|YP_003675237.1| prolyl-tRNA synthetase [Methylotenera sp. 301] gi|297258815|gb|ADI30660.1| prolyl-tRNA synthetase [Methylotenera sp. 301] Length = 573 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 115/235 (48%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F +E P DAE+ SH LM+R G+I + G+YSW+PLG + L V I+R+E Sbjct: 1 MRASQFFFNTQKEAPNDAELPSHILMVRAGLIKRLGSGLYSWMPLGLRVLRKVETIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA+E+ +P +Q +LW E+GR+ +G +ML++ DR+ + +GPTHEEV+TDI RS Sbjct: 61 MNKAGALELLMPAVQPRELWDETGRWAVFGPQMLKITDRHSREFCFGPTHEEVITDIARS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 121 EVRSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFMMKDAYSFHTDFASLETTYANMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +F+RLGLK ++A++G IGGD SHEF VLAD+GE + D+ E Sbjct: 181 YSNVFNRLGLKFRAVKADTGAIGGDGSHEFHVLADSGEDGLAYCDT-SDYAANVE 234 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 69/185 (37%), Positives = 105/185 (56%), Gaps = 3/185 (1%) Query: 259 TSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D+ P+ K + RGIEVGHIF TKYS M+AT+ + ++MG Sbjct: 386 VADIRNVVEGDASPDGKGILSLCRGIEVGHIFQLRTKYSEAMNATYLDEASQTQVMEMGC 445 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+V A IE +D +GII+P S+APF +++ I + A KIYA L+ Sbjct: 446 YGIGVSRIVGAAIEQGNDARGIIFPKSMAPFTVTICPIGYDKSEAVSAAANKIYADLNAA 505 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G + DD GE+ G FA ADL+G P ++++G + ++D VE K R + ++L+ V+ Sbjct: 506 GIEALLDDRGERPGVMFAEADLMGIPHRLVIGERGLADGTVEYKGRTDAEAQMVALKNVV 565 Query: 436 NYASH 440 + Sbjct: 566 EFMQK 570 >gi|157825427|ref|YP_001493147.1| threonyl-tRNA synthetase [Rickettsia akari str. Hartford] gi|166225491|sp|A8GML4|SYT_RICAH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157799385|gb|ABV74639.1| threonyl-tRNA synthetase [Rickettsia akari str. Hartford] Length = 635 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 74/439 (16%), Positives = 151/439 (34%), Gaps = 40/439 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y L + + RD +L L + ++G+ W G + + IR++ + Sbjct: 230 NYLLMLEEAEKRDHRKLGKELDLF--HFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKN 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P L LW SG ++ + +M D +DK + P + IF+ IKS Sbjct: 288 GYTEVKTPVLVDKSLWEASGHWEKFRDDMF-ALDTDDKTLALKPMNCPCHVQIFKQGIKS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + L R+E G+MR R + DA+ F + + + + Sbjct: 347 YRDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCTEEQITDETVSF-CKLLTE 405 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G +I ++ P S D + + Sbjct: 406 VYKDFGFTNISVKFSDRPEVR-----------------AGSNGTWDKAENALKEAVEKAG 448 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 ++ A Y + L D++ + ++ F + + A++ Sbjct: 449 FTYTLNPGEGAFYGPKLEF---VLTDAIGRQWQCGTLQMD----FVLPER----LDASYI 497 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 A G+ + +G++ ++ + G +W + I Sbjct: 498 AASGEKKRPVMLHRAILGSLERFIGILIEEYAGCFPLW------LAPIQVAIATITSDLN 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D ++ L G + ++I + P+ ++G + + +V I+ Sbjct: 552 DYALEVQKALIDNGVRTDINISPDKINYKIREFYNQKIPMIAVIGKQEQENKQVTIRRLR 611 Query: 423 TGIREDMSLEEVINYASHR 441 T +E +SLE++I Sbjct: 612 TTEQEVLSLEQLITLIKEE 630 >gi|212704422|ref|ZP_03312550.1| hypothetical protein DESPIG_02477 [Desulfovibrio piger ATCC 29098] gi|212672143|gb|EEB32626.1| hypothetical protein DESPIG_02477 [Desulfovibrio piger ATCC 29098] Length = 648 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 88/442 (19%), Positives = 143/442 (32%), Gaps = 43/442 (9%) Query: 2 RRSKYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + +L L+E R D +L T + G+ WLP G + R E Sbjct: 229 KALNAYLKQLEEAKRRDHRKLGRELGFFTFH-EDVAPGMVFWLPKGMMMRTILEDFWRRE 287 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + + P L + W SG YD Y + M D P + I+R+ Sbjct: 288 HIKRNYDLVQGPQLLRVETWQRSGHYDHYRQNM-YFTQIEDDQYGIKPMNCISHMLIYRN 346 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 ++SYR+LP ++++ + R E G++R R+F DA+ + + Sbjct: 347 DLRSYRDLPQRYFELGVVHRHEKSGTLHGLLRVRQFTQDDAHILCTPEQLEGE-ILGVIH 405 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + H G V T + + + + Sbjct: 406 LIRDLMHLFGFDYK------------------VGISTRPKDSIGTDEAWELATNALIEAV 447 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 I E A Y DV L D + + S ++ F ++ Sbjct: 448 KKADMPYEINEGDGAFYGPKIDVR---LLDCIGREWQCSTIQVD----FTLPERFD---- 496 Query: 300 ATFKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ G DG+ H M I R + +IE A L AH Sbjct: 497 LTYVGQDGERHRPVMVHRAIMGSLERFIGVLIEQYAGAMPTWLAPEQARI---LTVTDAH 553 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 ++ ACE+ L +G V D E++G + A L P ++VG K V Sbjct: 554 NEAALKACEE----LKALGIRVTADTRNEKLGFKVREAQLAKVPYILVVGEKEAQAGGVN 609 Query: 418 IKHRLTGIREDMSLEEVINYAS 439 ++ R S+ EV Sbjct: 610 VRLRNGDNLGLKSVAEVAALIR 631 >gi|189499158|ref|YP_001958628.1| threonyl-tRNA synthetase [Chlorobium phaeobacteroides BS1] gi|238692225|sp|B3EKG9|SYT_CHLPB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189494599|gb|ACE03147.1| threonyl-tRNA synthetase [Chlorobium phaeobacteroides BS1] Length = 659 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 74/449 (16%), Positives = 151/449 (33%), Gaps = 37/449 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++ + + RD +L L + G+ WLP G + A ++EEQ Sbjct: 241 LKQHLARLEEAKKRDHRKLGAELELFM-LSQDVGSGLPIWLPKGAIIRSELEAFLKEEQR 299 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEML---RLADRNDKA--MIYGPTHEEVMTDI 117 + G + + P + + DL+ SG Y Y D + + P + I Sbjct: 300 KRGYVPVYTPHIGNIDLYKRSGHYPYYSDSQFPPLTYKDDLGREEQYLLKPMNCPHHHLI 359 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 + S ++SYR+LP + +R E G++R+R F D++ + + Sbjct: 360 YSSQLRSYRDLPIRMAEFGTVYRHEQSGELNGLIRARGFTQDDSHIYCRPDQLVDEICA- 418 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 +F LG I +R + +++ Sbjct: 419 AIDLTKFVFTTLGFDDIEVRLSLHDPENQG-------------KYGGTEEVWKQAEKDVR 465 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 D + I + Y D + D+L ++ ++ Sbjct: 466 EAADRMEINYVIGIGEASFYGPKIDFI---VRDALGRKWQLGTVQVDYVMP--------E 514 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 ++ G+DGK H + I + +P +AP +++++ I Sbjct: 515 RFDLSYIGSDGKPHRPVIIHRAPFGSMER--FIGVLIEHTAGNFPLWLAPVQVAVLPIT- 571 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + E+++ L G D E+IG + A++ P VI+G K ++ Sbjct: 572 --EEVHAYAERVHQMLIDNGIRADLDIRSEKIGKKIREAEVGKIPYMVIIGQKEADSEEI 629 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ G + ++L+ + + N Sbjct: 630 SLRRHRKGDQGSLTLQALKDMLVKEVRNK 658 >gi|148827919|ref|YP_001292672.1| prolyl-tRNA synthetase [Haemophilus influenzae PittGG] gi|166980128|sp|A5UHN3|SYP_HAEIG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|148719161|gb|ABR00289.1| prolyl-tRNA synthetase [Haemophilus influenzae PittGG] Length = 572 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 125/243 (51%), Positives = 161/243 (66%), Gaps = 1/243 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF+RLGL ++A++G IGG SHEF VLA +GE V DF E + Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDFAANIELAEAI 239 Query: 241 DII 243 I Sbjct: 240 AIG 242 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 70/188 (37%), Positives = 106/188 (56%), Gaps = 4/188 (2%) Query: 261 DVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P+ K RGIEVGHIF G KYS M AT +G DGK + MG YG Sbjct: 384 DLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGKKYSEAMKATVQGEDGKPLVMTMGCYG 443 Query: 319 IGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKVG 376 IG RVVA+ IE HD + I D +APF ++++ + + + E++Y L G Sbjct: 444 IGVTRVVASAIEQHHDERGIIWPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQG 503 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV +DD E+ G FA +L+G P V++G K + + ++E K+R TG +E +S +++++ Sbjct: 504 VDVIFDDRKERPGVMFADMELIGIPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLS 563 Query: 437 YASHRFSN 444 + + N Sbjct: 564 VLNEKLGN 571 >gi|307251435|ref|ZP_07533349.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306856519|gb|EFM88661.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 571 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 122/243 (50%), Positives = 158/243 (65%), Gaps = 1/243 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHVDKASLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V DF E + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDFAANIELAEAV 239 Query: 241 DII 243 + Sbjct: 240 AVG 242 Score = 177 bits (448), Expect = 4e-42, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 111/207 (53%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPM 298 D ++ + A +D+ N D P+ K V RGIEVGHIF GTKYS M Sbjct: 364 DGKHYFNVNWERDAAMPEVADLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 AT +G DGK + MG YGIG RVVAA IE HD + I D +APF ++++ + Sbjct: 424 KATVQGEDGKPLVMTMGCYGIGVTRVVAAAIEQHHDDRGIIWPSDEIAPFTVAIVPMNMH 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + E++Y L DV +DD E+ G FA +L+G P V++G K +++ ++ Sbjct: 484 KSESVQQFSEELYRTLKAQDVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K+R TG ++ ++ ++++ + Sbjct: 544 EYKNRRTGEKQMIAKDQLLAFLKENVK 570 >gi|146297790|ref|YP_001192381.1| threonyl-tRNA synthetase [Flavobacterium johnsoniae UW101] gi|189083608|sp|A5FP01|SYT_FLAJO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|146152208|gb|ABQ03062.1| threonyl-tRNA synthetase [Flavobacterium johnsoniae UW101] Length = 648 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 82/439 (18%), Positives = 153/439 (34%), Gaps = 40/439 (9%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L + +G+ WLP G D + ++ Q + G ++ P Sbjct: 236 AKRRDHRKLGKELELFA-FSQKVGQGLPLWLPKGAALRDRLEQFLKRAQKKAGYEQVVSP 294 Query: 73 TLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 + +L+V SG Y YG + + + + P + +I+ SY++LP Sbjct: 295 HIGQKELYVTSGHYAKYGADSFQPIHTPAEGEEFLLKPMNCPHHCEIYNVRPWSYKDLPK 354 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + + +R E G+ R R F DA+ F TPE + K+ L +F LG Sbjct: 355 RYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFC-TPEQLDEEFKKVIDLVLYVFGSLG 413 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 ++ + D + + + D + + LN++V Sbjct: 414 FENFTAQISLR--------------DQEDREKYIGTDENWEKAENAIINAAKDKGLNTVV 459 Query: 250 E-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 E A Y D + D+L ++ ++ T+KGAD + Sbjct: 460 EYGEAAFYGPKLDFM---VKDALGRQWQLGTIQVDYNLP--------ERFELTYKGADNE 508 Query: 309 DHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 H + G+M A++ G +W +SL + + +K Sbjct: 509 LHRPVMIHRAPFGSMERFIAILLEHTAGNFPLWLMPEQAIILSL------SEKYENYAKK 562 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + L D+ E IG + A++ P +IVG + + + I+ + Sbjct: 563 VLDLLENHEIRALIDNRNETIGKKIRDAEMQKIPFMLIVGEEEEKNGTISIRRHGQEGKG 622 Query: 428 --DMSLEEVINYASHRFSN 444 +S+EE + Sbjct: 623 NITVSIEEFASIVDEEIKK 641 >gi|262368848|ref|ZP_06062177.1| prolyl-tRNA synthetase [Acinetobacter johnsonii SH046] gi|262316526|gb|EEY97564.1| prolyl-tRNA synthetase [Acinetobacter johnsonii SH046] Length = 572 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 120/235 (51%), Positives = 161/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DAE+ SH+LMLR GMI + + G+Y+WLP+G + L+ V AI+ EE Sbjct: 1 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGVRVLNKVAAIVHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N G++E+ +P Q A LW ESGRY YG E+LR DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGSLEVLMPVTQPASLWEESGRYVQYGPELLRFKDRHGNPFVLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQ+Q KFRDE+RPRFGVMRSREF+MKDAYSF E + +Y+ M+ + Sbjct: 121 ELKSYKQLPANFYQVQTKFRDEIRPRFGVMRSREFIMKDAYSFHSNQESLQETYDIMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF RLGL P++A++G IGG SHEF VLA +GE + D+ E Sbjct: 181 YCKIFTRLGLDFRPVQADTGSIGGSGSHEFHVLASSGEDDIAF-STESDYAANVE 234 Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 75/217 (34%), Positives = 108/217 (49%), Gaps = 7/217 (3%) Query: 227 FMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEV 284 DF + D Q+T Y D+ N D P+ K RGIEV Sbjct: 360 LSDFVAGANEIDKHVTGLNWERDAQFTEVY----DLRNVVEGDPSPDGKGTLQIKRGIEV 415 Query: 285 GHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSV 344 GHIF G KYS + G DGK V MG YGIG RVVA+ IE + D KGIIWP ++ Sbjct: 416 GHIFQLGQKYSEALGCKVLGEDGKPFTVTMGCYGIGVTRVVASAIEQNFDEKGIIWPAAI 475 Query: 345 APFKISLINIKA-HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQ 403 APF+++++ + A +A E +YA L+ G DV DD E+ G +F+ +L G P + Sbjct: 476 APFEVAIVPMNAHKSPRSLEAAEALYAELTTAGYDVLLDDRNERPGVKFSDLELTGIPHR 535 Query: 404 VIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +++G K + E K R ++S +E++ + Sbjct: 536 IVIGEKGLDAGTFEYKGRRDAESVNISKDELLAKIAK 572 >gi|238898885|ref|YP_002924567.1| threonine tRNA synthetase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259516538|sp|C4K776|SYT_HAMD5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|229466645|gb|ACQ68419.1| threonine tRNA synthetase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 638 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 152/442 (34%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD L + + G+ W G + +IRE+ Sbjct: 232 YLNRLEEATKRDHRKIGKTQDLY--HFQEEAPGMVFWHENGWIVFRELEILIREKLKEYE 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +++Y + M ++ P + +IF+ +KSY Sbjct: 290 YQEVKGPFMMDRVLWEKTGHWENYSENMFT-TLSENREYCIKPMNCPGHLEIFKQGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G+MR R F DA+ F + K + I Sbjct: 349 RDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHIFCTEKQVRKE-VSNCIKMTYDI 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K I ++ + P S E A+ + + Sbjct: 408 YQTFGFKKIAVKLSTRPEKRIGSDEIWTQAE-----------------EDLASVLKEQGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L+D L + ++ F + ++A + Sbjct: 451 TFELQPGEGAFYGPKIEF---TLYDCLDRAWQCGTVQLD----FSLPVR----LNAFYID 499 Query: 305 ADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + V + +G++ ++ + +P +AP ++ LINI + D Sbjct: 500 ENSERQVPVMIHRAILGSIERFIGILT---EEYAGFFPVWLAPVQVMLINIT---EKQSD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +K+ L ++G D E+IG + L P ++ G K V +++ ++ Sbjct: 554 YVKKVAKNLQQLGVRAKVDLRNEKIGFKIRQHTLYRIPYILVCGDKEVESNQIAVRTHSG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 S+ + S+ Sbjct: 614 KDLGSFSVNVFADKLLEEISSR 635 >gi|302871195|ref|YP_003839831.1| prolyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47] gi|302574054|gb|ADL41845.1| prolyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47] Length = 572 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 122/265 (46%), Positives = 162/265 (61%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F+P L+E P DAEI SHKLMLR+G + Q S GIY +LPLG + L + I+REE Sbjct: 1 MKVSELFMPTLKETPSDAEIESHKLMLRSGFMRQLSSGIYVYLPLGYRVLRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ + L +LW ESGR+ +G EM R+ DRN++ GPTHEE T I R+ Sbjct: 61 MDRSGAQEVHMSALMPKELWEESGRWAIFGPEMFRIKDRNEREYCLGPTHEEAFTYIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR+LP YQIQ KFRDE RPRFGVMR REF MKDAYSFD+ +G SY KM+ + Sbjct: 121 EISSYRDLPKILYQIQTKFRDERRPRFGVMRCREFTMKDAYSFDIDEKGLDISYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+RIF R GL + A++G +GG SHEF+V + GE ++ K + D Sbjct: 181 YVRIFKRCGLDVKIVEADTGAMGGASSHEFMVPSSVGEAEIAYCKACGYAANLEKAECLD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 + N +++ Y E Sbjct: 241 IPVETNEDLKEKQEVYTPNVRTIEE 265 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 68/194 (35%), Positives = 102/194 (52%), Gaps = 4/194 (2%) Query: 256 YAATSDVHNEKLFDSLPEN---KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 +D+ N D P+ K RGIEVGHIF GTKY+ + G+ ++ Sbjct: 375 VTRFADLRNITQDDLCPKCRSQKVTIERGIEVGHIFKLGTKYTEAFGCVYTDEKGEKKFM 434 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R AA+IE HD GIIWP +VAP+++ ++ + D+ +IY L Sbjct: 435 IMGCYGIGINRTAAAIIEQMHDEDGIIWPITVAPYEVIVVPVNVKDENQSKIAFEIYENL 494 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 K G +V DD E+ G +F ADL+G P +V VG K VS+ K+EI++R T + ++ Sbjct: 495 QKNGVEVLIDDRDERAGVKFKDADLIGIPFRVTVGKK-VSEGKIEIRNRRTKESFEFEID 553 Query: 433 EVINYASHRFSNNR 446 + + + + Sbjct: 554 NAVEFIINLIKQEK 567 >gi|224823461|ref|ZP_03696570.1| prolyl-tRNA synthetase [Lutiella nitroferrum 2002] gi|224603916|gb|EEG10090.1| prolyl-tRNA synthetase [Lutiella nitroferrum 2002] Length = 571 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 125/235 (53%), Positives = 164/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F+ L+E P DA+I S KLMLR G I + + GIYSW+P+G K+L V AI+REE Sbjct: 1 MRASQFFISTLKEAPADADIVSQKLMLRAGFIRKAAAGIYSWMPMGLKSLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A LW E+GR+D+ G+EMLR DR+++ + PT EEV+TD+ R Sbjct: 61 MNRAGAIEVIMPIVQPAGLWQETGRWDTMGEEMLRFKDRHERDFVIQPTSEEVVTDLIRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP FYQIQ KFRDE RPRFGVMR REF MKDAYSFD + + + SY+ M+ + Sbjct: 121 DLKSYRALPKNFYQIQTKFRDERRPRFGVMRGREFTMKDAYSFDRSADAAGVSYDNMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL + A++G IGGD SHEF V+A TGE + D D+ E Sbjct: 181 YCKIFDRIGLTYRAVAADTGAIGGDRSHEFQVIAATGEDAIIYCPD-SDYAANIE 234 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 110/197 (55%), Gaps = 3/197 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 P +D+ N D P+ K V RGIEVGH+FY GTKYS M+ATF DGK Sbjct: 375 GRDCPEPIVADIRNVVAGDPSPDGKGVLAIERGIEVGHVFYLGTKYSQAMNATFLDEDGK 434 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 + +MG YGIG R++ A IE + D KGIIWPD++APF + L + + A ++ Sbjct: 435 PKFFEMGCYGIGVTRILGAAIEQNFDAKGIIWPDAIAPFTVVLCPVGYDRSAEVKAAADQ 494 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +YA L G DV DD GE+ G+ FA +L+G P +V +G + + + KVE +HR Sbjct: 495 LYAELVANGVDVILDDRGERPGAMFADWELIGVPHRVTIGDRGLKEGKVEYQHRRDSEAT 554 Query: 428 DMSLEEVINYASHRFSN 444 M+++ ++ + + Sbjct: 555 GMAVDAILEHVLVKLGK 571 >gi|299529723|ref|ZP_07043160.1| prolyl-tRNA synthetase [Comamonas testosteroni S44] gi|298722586|gb|EFI63506.1| prolyl-tRNA synthetase [Comamonas testosteroni S44] Length = 580 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 118/237 (49%), Positives = 160/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++ + L+E P DAE+ SHKLM+R GMI + GIY+++P+G + + V AI+REE Sbjct: 1 MKASQFLISTLKEAPADAEVVSHKLMMRAGMIKKLGAGIYNYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE ++P +Q A+LW E+GR++ G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 61 MNRAGAIETTMPVVQPAELWQETGRFEKMGPELLRIQDRHGRDFVIQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 KSY+ LP YQIQ KFRDE RPRFG+MR REF+MKDAYSFD + ++ SY M + Sbjct: 121 EFKSYKQLPKNLYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDKDRDAAQISYQTMREA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R GL+ +RA+SG IGGDLS EF V+A TGE + + D+ E Sbjct: 181 YKRIFDRFGLQYRAVRADSGAIGGDLSEEFQVIASTGEDAIVYCPN-SDYAANIEKA 236 Score = 166 bits (420), Expect = 7e-39, Method: Composition-based stats. Identities = 69/189 (36%), Positives = 106/189 (56%), Gaps = 3/189 (1%) Query: 257 AATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A +D+ N D P+ + RGIE+GH+FY GTKYS M ATF G +GK + +M Sbjct: 390 AVVADLRNVVAGDRSPDGAGELAIERGIEIGHVFYLGTKYSKAMEATFLGDNGKPQHFEM 449 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLS 373 G YGIG R+ AA +E +HD +G+IWPD++APF + + I + + EK+Y L Sbjct: 450 GCYGIGVTRLPAAAVEQNHDERGMIWPDAIAPFTVVICPIGMGRSEAVKTEAEKLYGELL 509 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G DV DD E+ G+ A +L+G P +V++G + + + VE + R ++ E Sbjct: 510 ALGVDVILDDRDERPGAMLADWELIGVPHRVVLGDRGLKEGVVEYQQRRDTEATKLATNE 569 Query: 434 VINYASHRF 442 V+ + R Sbjct: 570 VLAHLKSRL 578 >gi|114566427|ref|YP_753581.1| prolyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122318501|sp|Q0AYJ4|SYP_SYNWW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114337362|gb|ABI68210.1| prolyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 570 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 117/280 (41%), Positives = 179/280 (63%), Gaps = 4/280 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F P L+E P +AE+ SH+L+LR G I + + G+YS+LPL + L + I+REE Sbjct: 1 MKASELFFPTLREVPSEAEVLSHQLLLRAGFIRKATAGVYSYLPLANRVLKKIMNIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G E+ +P +Q A+LW +SGR++ YG EM RL DR+++ GPTHEE++T + + Sbjct: 61 MDRAGGQEVILPIIQPAELWKKSGRWEVYGDEMFRLKDRHNRDFALGPTHEEIITTLVDA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR+LP YQIQ K+RDE+RPRFG+MR REF+MKD YSFD+ EG SY+KM+ + Sbjct: 121 DVHSYRHLPLLLYQIQNKYRDEIRPRFGLMRGREFIMKDLYSFDIDEEGLDISYHKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y RIF RL L+ + A+SG IGG+ SHEF+VLA+ GE ++ K+ D+ +E Sbjct: 181 YNRIFQRLKLQYRVVEADSGAIGGNESHEFMVLAENGEAEIVYCKNC-DYGANTEKAVCS 239 Query: 240 --DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV 277 + ++ +E + + + ++P+ K++ Sbjct: 240 LEEPKVTEEEQLELEKVHTPGQRTIQDLVDYMNIPKEKQI 279 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 63/185 (34%), Positives = 99/185 (53%), Gaps = 2/185 (1%) Query: 257 AATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A +D+ N DS P S RGIEVGHIF GTKYS + A + G++ + M Sbjct: 378 AGINDIRNAVAGDSCPVCSAPLYSMRGIEVGHIFKLGTKYSEVLEANYLDQKGQEKPMVM 437 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G YGIG R +AA +E S D GI+WP + PF++ ++ + + ++ A +Y + Sbjct: 438 GCYGIGISRTMAAAVEQSADENGIVWPLPITPFEVIIVPVNSKNEEQMQAAWSLYEEFKQ 497 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G + DD E+ G +F ADL+G PL++ +G + + + +VE+K R E + L+ V Sbjct: 498 EGLETIVDDRDERAGVKFKDADLIGIPLRITIGPRSLQEKQVEVKKRSDKDIELVPLDAV 557 Query: 435 INYAS 439 + Sbjct: 558 SSRVK 562 >gi|254468329|ref|ZP_05081735.1| prolyl-tRNA synthetase [beta proteobacterium KB13] gi|207087139|gb|EDZ64422.1| prolyl-tRNA synthetase [beta proteobacterium KB13] Length = 561 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 122/293 (41%), Positives = 177/293 (60%), Gaps = 6/293 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P+DAE+ SH+LM+R G + + S G+Y+W+P+G + L + +IIREE Sbjct: 1 MKTSQFFISTLKEAPQDAELKSHQLMVRAGYVKRLSSGLYTWMPIGLRVLRKIESIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N +GA+E+ +P +Q A+LW E+GR+ +G +ML++ DR+ +GPTHEEV+TDI R Sbjct: 61 MNASGAVELLMPAIQPAELWQETGRWQQFGPQMLKINDRHQNEFCFGPTHEEVITDIARK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF + Y MF + Sbjct: 121 ELNSYKQLPINFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHANENCLQKMYELMFET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GL+ + A+SG IGGD SHEF VLAD+GE + S + + Sbjct: 181 YNRIFSRIGLQFRSVAADSGAIGGDASHEFHVLADSGEDVIAYSDQSEYAANIEKASTVF 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 S + V ++L E ++ + I +F + Sbjct: 241 KKASKENKVP------TEKVHTPEITTIEALQEFFKIDTKSILKAVVFNHDDE 287 Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 74/214 (34%), Positives = 109/214 (50%), Gaps = 3/214 (1%) Query: 232 IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE--NKRVSARGIEVGHIFY 289 I EN + D+ N D P+ K RGIEVGHIF Sbjct: 348 IEMENMVCGANEEHYHFTNFQSINTEKFVDITNVVEGDVSPDESGKLKFCRGIEVGHIFQ 407 Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 G KYS M A+ +GK + MG YGIG R+VAA IE ++D G+I P S+APF++ Sbjct: 408 LGKKYSESMQASILNEEGKSQTMTMGCYGIGVSRIVAAAIEQNNDENGMILPKSIAPFEL 467 Query: 350 SLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGS 408 ++ I + R KIYA L K G DV DD + G FA +DL+G P ++++G Sbjct: 468 IIVPIGYHKNDKVRAQANKIYADLLKSGIDVILDDRVARPGIMFAESDLIGIPNRLVIGE 527 Query: 409 KFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 K ++++KVE K R E +++ ++I++ + Sbjct: 528 KSLNENKVEFKSRSESNSEMINISDLIHFIKSKI 561 >gi|90417791|ref|ZP_01225703.1| threonyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1] gi|90337463|gb|EAS51114.1| threonyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1] Length = 659 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 76/426 (17%), Positives = 147/426 (34%), Gaps = 34/426 (7%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD ++ L + + G W P G + + + +R Q G Sbjct: 236 YLHMLEEAEKRDHRRLGREMDLF--HFQEDAPGTVFWHPKGWRLYQTLVSYVRRRQEAEG 293 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E++ P L LW SG ++ Y ++M +++ P + IF+ +KSY Sbjct: 294 YQEVNAPQLLERSLWETSGHWEKYHEDMFVTETEDERVFALKPMNCPGHVQIFKHGLKSY 353 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R E G+MR R F DA+ F + + S L I Sbjct: 354 RDLPLKIAEFGAVHRYEPSGALHGLMRVRAFTQDDAHVFCTEEQITAESLKIN-DLILSI 412 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + ++ + P S E A+ V ++ T Sbjct: 413 YRDFGFEDVLVKLSTRPEKRVGSDELWDKAEASMRDVLA---IIEEQGKGHITTA----- 464 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y + L D++ +V ++ FG A + Sbjct: 465 ---VAEGDGAFYGPKYEY---TLRDAIGRQWQVGTNQVDFNLPGRFG--------AFYID 510 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + + +G++ ++ + G +W + ++ D Sbjct: 511 RDSEKKTPVMLHRAMLGSVERFIGILIENCAGHLPLWLSPLQVVVATIT------SEADD 564 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L + G V D E+I + + P+ ++ G + + V I+ Sbjct: 565 YALQVAEELRQAGLQVETDLRNEKINYKVREHSMAKVPVIMVCGKREAEERTVNIRRLGA 624 Query: 424 GIREDM 429 + M Sbjct: 625 REQTPM 630 >gi|127513524|ref|YP_001094721.1| prolyl-tRNA synthetase [Shewanella loihica PV-4] gi|166980157|sp|A3QG64|SYP_SHELP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|126638819|gb|ABO24462.1| prolyl-tRNA synthetase [Shewanella loihica PV-4] Length = 569 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 124/240 (51%), Positives = 163/240 (67%), Gaps = 1/240 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L +E P +AE+ SH+LMLR GMI +++ G+YSWLP G + L V AI+REE Sbjct: 1 MRVSKYLLSTQKETPANAEVVSHQLMLRAGMIRRNASGLYSWLPSGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q ADLWVE+GR+D +G E+LR DR+++ + GPTHEEV+TDI R Sbjct: 61 MNNAGAVEILMPMVQPADLWVETGRWDKFGPELLRFQDRHNRDFVLGPTHEEVITDIIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREFLMKDAYSF L E +Y M+ + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHLDQETMDDTYQAMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y I R+GL P+ A++G IGG +SHEF VLA++GE + D+ E + Sbjct: 181 YSNILGRMGLAFRPVLADTGSIGGSMSHEFHVLANSGEDLIAY-STESDYAANIEKAEAP 239 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 70/189 (37%), Positives = 109/189 (57%), Gaps = 3/189 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P A +D+ N + P K RGIEVGHIF GT YS M A+ +GK + Sbjct: 379 PQAEVADLRNVIEGEPSPCGKGTIGLLRGIEVGHIFQLGTNYSKAMGASVLDENGKAQTL 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYAR 371 MG YG+G R+VAA IE +HD +GIIWP ++APFK+ ++ + +D EK+Y+ Sbjct: 439 LMGCYGVGVSRIVAAAIEQNHDDRGIIWPAAIAPFKVGILPMNMHKSHRIKDMAEKLYSD 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 LS G +V +DD E+ G FA +L+G P +++G + + + E K+R TG ++++ Sbjct: 499 LSDAGIEVLFDDRKERPGVMFADMELIGLPHVIVIGERNIDNGVFEYKNRRTGEKQEIPF 558 Query: 432 EEVINYASH 440 EE++++ Sbjct: 559 EEIVDFIKS 567 >gi|317402479|gb|EFV83047.1| ProS protein [Achromobacter xylosoxidans C54] Length = 576 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 127/265 (47%), Positives = 174/265 (65%), Gaps = 5/265 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y + L+E P +AE+ASH+LM R GMI + + GIY+++PLG K + V AI+REE Sbjct: 1 MRASNYHINTLKEAPSEAEVASHQLMTRAGMIRKLAGGIYTYMPLGLKIIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N +GAIE+ +P +Q A+LW+ESGR++ YG E+LR+ DR+ + + PT EEV+TDI R+ Sbjct: 61 MNASGAIELLMPVVQPAELWMESGRWEQYGAELLRIKDRHQRDFVLQPTSEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP FY IQ KFRDE RPRFG+MR REF MKDAYSFD G++ SY+ M+ + Sbjct: 121 EIHSYRQLPLNFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDEAGAQKSYDNMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+RIF RLGL+ + A++G IGG SHEF V+ADTGE + + D D+ E + Sbjct: 181 YMRIFGRLGLEFRAVAADTGSIGGTRSHEFQVIADTGEDLLVYNAD-SDYAANIELAEAP 239 Query: 241 ----DIISLNSIVEQWTAPYAATSD 261 + + + P AA + Sbjct: 240 GLYAERGAPTQPMADVATPGAAKCE 264 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 68/189 (35%), Positives = 100/189 (52%), Gaps = 3/189 (1%) Query: 259 TSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGH+FY G KYS + ATF GK ++MG Sbjct: 387 VADLRNVVAGDPSPDGKGTLSIQRGIEVGHVFYLGKKYSEALKATFLDETGKPAVLEMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+V A IE +HD +GIIWP ++APF++ + + + R+ K+Y L Sbjct: 447 YGIGITRIVGAAIEQNHDDRGIIWPRAIAPFEVVICPVGWGKSETVRNTSLKLYESLLAR 506 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD + G FA +L+G PL+V VG + ++D VE++ R + +E + Sbjct: 507 GVDVILDDRDARPGVMFAEWELIGAPLRVTVGERGLNDGVVELQARRETEAAKIPVESAL 566 Query: 436 NYASHRFSN 444 + Sbjct: 567 ETVLTKLDT 575 >gi|189083494|sp|A9KGU5|SYP_COXBN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 564 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 130/237 (54%), Positives = 169/237 (71%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++FL ++E P DA +ASH+LM+R GM+ + + G+Y+WLPLG + L V ++REE Sbjct: 1 MKVSQFFLATVKETPADAVLASHQLMIRAGMLRKLASGLYTWLPLGLRVLQKVADVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A LW ESGR+++YG E+LR+ DR+ +GPTHEEV+TDI R Sbjct: 61 MNRAGALELLMPIVQPASLWQESGRWEAYGAELLRIMDRHQNGFCFGPTHEEVITDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSFDL +G + +Y KMF + Sbjct: 121 ELKSYKQLPLNFYQIQTKFRDEIRPRFGVMRSREFLMKDAYSFDLDEKGMQAAYEKMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF RLGL + A++G IGGD SHEF VLAD GE V S D+ E Sbjct: 181 YRRIFTRLGLNFRAVLADTGAIGGDYSHEFQVLADVGEDTVVYSD-ESDYAANIEKA 236 Score = 164 bits (415), Expect = 3e-38, Method: Composition-based stats. Identities = 82/203 (40%), Positives = 112/203 (55%), Gaps = 4/203 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLP 297 DD +N E+ P + +D+ D P+ K ARGIEVG +F G KYS Sbjct: 363 DDFHWINVNWER-DVPLGSVADIRKVVEGDISPDGKGRLRFARGIEVGQVFQLGDKYSRK 421 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 M+AT GK Y+QMG YGIG R VAA IE +HD +GIIWP +APF I+L+ + H Sbjct: 422 MNATVVDELGKSRYLQMGCYGIGVSRTVAAAIEQNHDERGIIWPTPMAPFFIALVPVNMH 481 Query: 358 DQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 R+ACEK+Y L G +V WDD E+ G FA DL+G P ++++ + V Sbjct: 482 KSYRVREACEKLYNELIDAGYEVLWDDRKERPGVMFADMDLIGIPHRLVISESGLDRGIV 541 Query: 417 EIKHRLTGIREDMSLEEVINYAS 439 E K R + E++SLE V++ Sbjct: 542 EYKARKSKEAENVSLENVLSVFR 564 >gi|227543651|ref|ZP_03973700.1| threonine--tRNA ligase [Lactobacillus reuteri CF48-3A] gi|300908708|ref|ZP_07126171.1| threonine--tRNA ligase [Lactobacillus reuteri SD2112] gi|227186362|gb|EEI66433.1| threonine--tRNA ligase [Lactobacillus reuteri CF48-3A] gi|300894115|gb|EFK87473.1| threonine--tRNA ligase [Lactobacillus reuteri SD2112] Length = 627 Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats. Identities = 72/441 (16%), Positives = 155/441 (35%), Gaps = 36/441 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + RD + ++L L + + G+ WLP G + I + + G Sbjct: 215 KRQEAKERDHRVIGNQLDLF--FVDPKVGAGLPYWLPKGATIRRTIERYIIDREVADGYQ 272 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYR 126 + P L + D + SG ++ Y +M D D M P + +++ HI+SYR Sbjct: 273 HVYTPVLMNLDAYKTSGHWEHYRDDMFPPMDMGDGEMLELRPMNCPSHIQVYKHHIRSYR 332 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ + R E G+ R RE + D ++F + + K+ + ++ Sbjct: 333 DLPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVTLDQIRSE-FAKILKLIMSVY 391 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + R + + + + + + DD+ Sbjct: 392 EDFDITDYSFRLSLRD-------------PKNVKKYYANDEMWEKSQSMLKSAMDDLNLD 438 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y D+ + +L ++ +S ++ F ++ ++ G Sbjct: 439 YYEAEGEAAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----GLSYVGQ 487 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DGK+H + +G M A + + G W I +++ + Sbjct: 488 DGKEHQPVMIHRGVVGTMERFMAYLTEIYKGAFPTWLAPEQVH-----IIPVNEEAHGEY 542 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + ++ V D E++G + A P ++VG +++ V ++ Sbjct: 543 ADNLAKKMKAANIRVNVDHRNEKMGYKIREAQTQKVPYTLVVGDDEKNNNGVSVRKYGEK 602 Query: 425 IREDMSLEEVINYASHRFSNN 445 + +MS E +N ++ Sbjct: 603 EQNEMSQEAFMNEILEDIASY 623 >gi|194467309|ref|ZP_03073296.1| threonyl-tRNA synthetase [Lactobacillus reuteri 100-23] gi|194454345|gb|EDX43242.1| threonyl-tRNA synthetase [Lactobacillus reuteri 100-23] Length = 601 Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats. Identities = 72/441 (16%), Positives = 155/441 (35%), Gaps = 36/441 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + RD + ++L L + + G+ WLP G + I + + G Sbjct: 189 KRQEAKERDHRVIGNQLDLF--FVDPKVGAGLPYWLPKGATIRRTIERYIIDREVADGYQ 246 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYR 126 + P L + D + SG ++ Y +M D D M P + +++ HI+SYR Sbjct: 247 HVYTPVLMNLDAYKTSGHWEHYRDDMFPPMDMGDGEMLELRPMNCPSHIQVYKHHIRSYR 306 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ + R E G+ R RE + D ++F + + K+ + ++ Sbjct: 307 DLPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVTLDQIRSE-FAKILKLIMSVY 365 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + R + + + + + + DD+ Sbjct: 366 EDFDITDYSFRLSLRD-------------PKNVKKYYANDEMWEKSQSMLKSAMDDLNLD 412 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y D+ + +L ++ +S ++ F ++ ++ G Sbjct: 413 YYEAEGEAAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----GLSYVGQ 461 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DGK+H + +G M A + + G W I +++ + Sbjct: 462 DGKEHQPVMIHRGVVGTMERFMAYLTEIYKGAFPTWLAPEQVH-----IIPVNEEAHGEY 516 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + ++ V D E++G + A P ++VG +++ V ++ Sbjct: 517 ADNLAKKMKAANIRVNVDHRNEKMGYKIREAQTQKVPYTLVVGDDEKNNNGVSVRKYGEK 576 Query: 425 IREDMSLEEVINYASHRFSNN 445 + +MS E +N ++ Sbjct: 577 EQNEMSQEAFMNEILEDIASY 597 >gi|326404590|ref|YP_004284672.1| threonyl-tRNA synthetase [Acidiphilium multivorum AIU301] gi|325051452|dbj|BAJ81790.1| threonyl-tRNA synthetase [Acidiphilium multivorum AIU301] Length = 640 Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats. Identities = 80/437 (18%), Positives = 147/437 (33%), Gaps = 39/437 (8%) Query: 8 LPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E R D ++ L + + + G W G + V A +R Q G Sbjct: 233 LKQLEEAERRDHRKIGRQMDLF--HMQEEAVGSVFWHEKGWRLYRTVEAYMRRRQEEFGY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 IE+ P L LW SG +D+Y M + DK + P + IF ++SY Sbjct: 291 IEVRTPQLLDRKLWEASGHWDNYRSHMFIAEVEDEDKVLAVKPMNCPCHVQIFNHGLRSY 350 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R E G+MR R F DA+ F + + + + R+ Sbjct: 351 RELPLRMAEFGACHRYEPSGALHGIMRVRAFAQDDAHIFCTEDQIADETV-RFVEMLRRV 409 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++ P S E D + + + Sbjct: 410 YADFGFPEFAVKFADRPTPRSGSDE-----------------VWDKAEAALRSACETAGV 452 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ A Y + L D++ + + ++ F + Sbjct: 453 TFTVNPGEGAFYGPKLEF---VLRDAIGRDWQCGTLQVD----FVLPERLDASY---VTA 502 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 G+ V + +G+ ++ + G+ +W S++ D Sbjct: 503 ESGRARPVMLHRAIVGSFERFIGILIENCAGRFPLWLAPTQAAVASIVT------DANDY 556 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E + A+L + G V D E+I ++ L P ++VG + V I+ + Sbjct: 557 AETVAAKLKEAGLAVATDTRNEKINAKVRDLSLALVPNILVVGRREAEQQTVSIRRLGSD 616 Query: 425 IREDMSLEEVINYASHR 441 ++ M+L+E + Sbjct: 617 KQDSMTLDEAVATLKAE 633 >gi|294788637|ref|ZP_06753879.1| proline--tRNA ligase [Simonsiella muelleri ATCC 29453] gi|294483514|gb|EFG31199.1| proline--tRNA ligase [Simonsiella muelleri ATCC 29453] Length = 571 Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats. Identities = 119/240 (49%), Positives = 159/240 (66%), Gaps = 2/240 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLMLR G+I ++ G+Y+W+P+G + L V I+REE Sbjct: 1 MKASQFFISTLKEAPAEATLASHKLMLRAGLIKANASGLYTWMPMGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR G +E+ +P +QSADLW ESGR+ YG E+LR+ DR+D + PT EE++TDI R Sbjct: 61 MNRVGCVELLMPVIQSADLWKESGRWQFYGDELLRITDRHDNEFCFSPTCEEMITDIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLT-PEGSKHSYNKMFV 179 I SY+ LP FY I KFRDE RPRFGVMR+REF+MKDAYSF + Y M+ Sbjct: 121 EINSYKQLPKNFYHINTKFRDERRPRFGVMRAREFVMKDAYSFHADFESLVRDGYQPMYD 180 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 +Y RIF+RLGL P+ A++G IGG SHEF VLAD+GE + S D+ E Sbjct: 181 AYCRIFNRLGLNFRPVAADTGSIGGTGSHEFQVLADSGEDVIAYSDS-SDYAANVELAQT 239 Score = 164 bits (415), Expect = 3e-38, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 110/227 (48%), Gaps = 7/227 (3%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQW----TAPYAATSDVHNEKLFDS--LPENKRVS 278 K + DF + + A D+ N D Sbjct: 345 KVYADFATEKGADWVIGANQDDYHYTGFNFGRDAAEPEFVDLRNVVAGDPSPCGSGSLKL 404 Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F TKYS M+ATF +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 405 ARGIEVGHVFQLRTKYSEAMNATFLDNNGKSQIMEMGCYGIGVTRVVAAAIEQNNDEKGI 464 Query: 339 IWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IW D++APF + ++ + + A +KI+A L G DV DD E+ G A ++L Sbjct: 465 IWTDAMAPFTVVIVPMNYKKSADVKAAADKIHAELLAQGVDVLLDDRDERAGVLLADSEL 524 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 LG P ++++G + + + VE R G + +++ E++ + + Sbjct: 525 LGIPHRIVIGDRALKEGNVEYAERKVGESQSIAVNEIVGKIKNVLAK 571 >gi|315659856|ref|ZP_07912715.1| threonine--tRNA ligase [Staphylococcus lugdunensis M23590] gi|315495144|gb|EFU83480.1| threonine--tRNA ligase [Staphylococcus lugdunensis M23590] Length = 638 Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 146/442 (33%), Gaps = 41/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 YF + + R+ +L L M + + G+ +L GQ + + +RE Q + Sbjct: 232 YFEFLREAEARNHRKLGKQLKLF--MFSEEAPGMPFYLSNGQFVRNQMENFLREIQLKND 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW ESG +D Y + M ++ P + IF++ ++SY Sbjct: 290 YDEVRTPLMMNQKLWEESGHWDHYHENM-YFTKVDENDYALKPMNCPGHMLIFKNELRSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 ++LP + R E G++R R F DA+ F K L++ Sbjct: 349 KDLPLRMAEFGQVHRHEFSGALNGLLRVRTFCQDDAHIF-----IMKSQIKSEVEDILKL 403 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 I + + T + S D++ Sbjct: 404 ID--------------YIYSVFGFTYSIELSTRPEDYLGELKLWNEAEQSLANVLDELGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 +I E A Y DVH + D+L + + + ++ F K+ T+ Sbjct: 450 KYTINEGDGAFYGPKIDVH---IKDALNRSHQCATVQLD----FQMPEKFD----LTYIN 498 Query: 305 ADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + G++ ++ G +W +NI Sbjct: 499 EQNEKERPVVLHRAIFGSLDRFFGILIEHFKGAFPLW------MAPVQVNIIGVSDNNTA 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K++ L V DD E++G + + + P +++G ++ V + Sbjct: 553 YVNKVFEALQNNNIRVVIDDRDEKLGKKIRESQMKKIPYTLVLGDHEQENNVVSARKYSH 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 E M ++ I + Sbjct: 613 EDNEVMDIQNFIAQLQEEVESK 634 >gi|260583173|ref|ZP_05850953.1| prolyl-tRNA synthetase [Haemophilus influenzae NT127] gi|260093791|gb|EEW77699.1| prolyl-tRNA synthetase [Haemophilus influenzae NT127] Length = 572 Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats. Identities = 145/428 (33%), Positives = 204/428 (47%), Gaps = 39/428 (9%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V ++REE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWEQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y IF+RLGL ++A++G IGG SHEF VLA +GE V DF E Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDFAANIELAEAV 239 Query: 236 -------------NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 D + ++ +VEQ+ P T K D + RG Sbjct: 240 AIGERQAPTAEMCLVDTPNAKTIAELVEQFNLPIEKTVKTLIVKGADENQPLVALIIRGD 299 Query: 283 EVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 + + F + G +GA+ + I + Sbjct: 300 HELNEIKAQKHPLVADPLEFADETEIKAKIGAGVGSLGAVNLNIPAIIDRTVALMSDFSC 359 Query: 343 SVAPFKISLINIKAHDQVCRDACEKIYA------------RLS-KVGCDV--FWDDMGEQ 387 N+ V + L K G +V + Q Sbjct: 360 GANIDGKHYFNVNWERDVAIPKVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIF-----Q 414 Query: 388 IGSQFAVA 395 +G +++ A Sbjct: 415 LGKKYSEA 422 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 110/208 (52%), Gaps = 4/208 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D ++ + D+ N D P+ K RGIEVGHIF G KYS M Sbjct: 364 DGKHYFNVNWERDVAIPKVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGKKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 AT +G DGK + MG YGIG RVVA+ IE HD + I D +APF ++++ + Sbjct: 424 KATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQHHDDRGIIWPSDEIAPFTVAIVPMNMH 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + E++Y L G DV +DD E+ G FA +L+G P V++G K + + ++ Sbjct: 484 KSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMFADMELIGIPHMVVIGEKNLDNGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSN 444 E K+R TG +E +S +++++ + + N Sbjct: 544 EYKNRRTGEKEMISKDKLLSVLNEKLGN 571 >gi|229496081|ref|ZP_04389803.1| threonyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406] gi|229316977|gb|EEN82888.1| threonyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406] Length = 672 Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats. Identities = 75/444 (16%), Positives = 146/444 (32%), Gaps = 36/444 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L G+ WLP G + + +++ Q Sbjct: 252 EYLAVLEEAKKRDHRKIGKELELFA-FSQTVGAGLPLWLPRGTRLRLRLEDFLKKIQKDF 310 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 G ++ P + + +L+ SG Y YG + R + + + P + +I+R Sbjct: 311 GYQQVMTPHIGNIELYKTSGHYAKYGADSFRPITTPQEGEEFMLKPMNCPHHCEIYRIKP 370 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+LP + +R E G+ R R F DA+ F TPE K + K+ Sbjct: 371 HSYRDLPVRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFC-TPEQVKDEFLKVMDII 429 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 IF L ++ + + S + D + + Sbjct: 430 FIIFKALKFENFEAQISLRDKNNRE-------------KYIGSDENWDRAEQAIIEACQE 476 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y D + D++ ++ ++ Sbjct: 477 KGLPAVVEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFDLE 525 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G D + H + G+M AV+ G+ +W + + + Sbjct: 526 YTGEDNQKHRPVMIHRAPFGSMERFVAVLIEHTAGRFPLWLTPDQVVVLPIG------EN 579 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + K+ L+ DD E+IG + +L P +IVG++ + V ++ Sbjct: 580 FNEYAYKVRDFLANHDITATVDDRNEKIGRKIRDNELKRIPYLLIVGAQESENETVSVRK 639 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 + G + + L + Sbjct: 640 QGEGDQGSVKLSTFAEKICQEVDD 663 >gi|221066194|ref|ZP_03542299.1| threonyl-tRNA synthetase [Comamonas testosteroni KF-1] gi|220711217|gb|EED66585.1| threonyl-tRNA synthetase [Comamonas testosteroni KF-1] Length = 639 Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats. Identities = 82/437 (18%), Positives = 139/437 (31%), Gaps = 36/437 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L I +HS G W P G V +R G Sbjct: 231 YLFRLEEAEKRDHRKLGRELDLF--HIDEHSPGTVFWHPKGWAVWQQVEQYMRRVYQDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D Y + M D + P + IF+ IKSY Sbjct: 289 YQEVKAPQILDKGLWEKTGHWDKYRENMFT-TDSEKREYALKPMNCPGHIIIFKQGIKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F + R+E G+MR R F D + F T + + ++ Sbjct: 348 RDLPLRFGEFGNCHRNEPTGSLHGIMRVRAFTQDDGHIFC-TEDQIQAEVTAFTSLLQKV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G +I R + P + E D + Sbjct: 407 YADFGFTNILYRLSTRPEKRIGTDE-----------------AWDKAENALAEGLRASGC 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D+L + ++ + A F G Sbjct: 450 EFEYLPGEGAFYGPKIEY---TLKDALGREWQCGTIQVDPNMP--------ERLDAEFVG 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + +G++ ++ H G W L A ++ Sbjct: 499 EDGERHRPIMLHRAILGSLERFIGILVEHHSGALPAWL--APVQAAVLNITDAQADYAQE 556 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +K+ L V D E+I + + P ++ G K + V ++ R Sbjct: 557 VAQKLQKALPNQSLRVVTDLRNEKITYKIREHSMQKLPYILVAGDKEKAAGAVAVRARGN 616 Query: 424 GIREDMSLEEVINYASH 440 MS++ I + Sbjct: 617 KDLGVMSVDAFIELLAK 633 >gi|303251144|ref|ZP_07337328.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307253514|ref|ZP_07535384.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302649995|gb|EFL80167.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859015|gb|EFM91058.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 571 Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats. Identities = 122/243 (50%), Positives = 158/243 (65%), Gaps = 1/243 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHVDKASLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V DF E + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDFAANIELAEAV 239 Query: 241 DII 243 + Sbjct: 240 AVG 242 Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 70/194 (36%), Positives = 108/194 (55%), Gaps = 4/194 (2%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + +D+ N D P+ K V RGIEVGHIF GTKYS M AT +G DGK Sbjct: 374 ERDVAMPEVADLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGK 433 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA-HDQVCRDACE 366 + MG YGIG RVVAA IE HD + I D +APF ++++ + + + E Sbjct: 434 PLVMTMGCYGIGVTRVVAAAIEQHHDDRGIIWPSDEIAPFTVAIVPMNMHKSESVQQFSE 493 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 ++Y L G DV +DD E+ G FA +L+G P V++G K +++ ++E K+R TG + Sbjct: 494 ELYRTLKAQGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEIEYKNRRTGEK 553 Query: 427 EDMSLEEVINYASH 440 + ++ ++++ + Sbjct: 554 QMIAKDQLLAFLKE 567 >gi|269797927|ref|YP_003311827.1| prolyl-tRNA synthetase [Veillonella parvula DSM 2008] gi|269094556|gb|ACZ24547.1| prolyl-tRNA synthetase [Veillonella parvula DSM 2008] Length = 572 Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats. Identities = 113/235 (48%), Positives = 158/235 (67%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M +K + P L+E P DA++ S +LMLR G + + + G+YS+LPLG K++ + AI+REE Sbjct: 1 MLATKLYAPTLREVPSDADVVSQQLMLRAGFMRKTANGLYSFLPLGWKSIKKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R A E+ +P LQ A++W ESGR+++YG EM+R+ DR+D GPTHEE++T + ++ Sbjct: 61 MDRASAQEIMMPILQPAEIWKESGRWNAYGAEMMRINDRHDNEFCLGPTHEEMITTLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP YQIQ KFRDE RPR+G+MRSREF+MKDAYSFD+ G SY M+ + Sbjct: 121 EINSYRQLPVNLYQIQSKFRDERRPRYGLMRSREFIMKDAYSFDIDEAGLDESYKSMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R GL P+ A+SG IGG +HEF+ +A+ GE + D+ E Sbjct: 181 YTRIFTRCGLTFRPVEADSGAIGGSGTHEFMAIAEAGEADIVYCTKC-DYAANIE 234 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 70/232 (30%), Positives = 113/232 (48%), Gaps = 3/232 (1%) Query: 216 TGETQVFCSKDFMD-FPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 T E + + M+ + + D + + + + D P+ Sbjct: 340 TDEFAIVVDESVMETYNVCGGANKKDAHYVNINPKRDFNVEDIIVAPIRLITKDDVCPKC 399 Query: 275 K--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 A+GIEVG +F GTKYS + ATF +G+ + + MG YGIG R +AA IE Sbjct: 400 GGALEHAKGIEVGQVFKLGTKYSEALQATFLDQNGRPNPMIMGCYGIGVSRTLAAAIEQY 459 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 HD GIIWP S+APF+ ++ I A D+ + IY L G DV DD ++ G +F Sbjct: 460 HDENGIIWPRSIAPFEAVIVPINAKDEALMATSQTIYTALQNAGVDVLLDDRKDRAGVKF 519 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 ADL+G+PL++ V + +++VEI+ R +G +++ V + + + Sbjct: 520 KDADLIGYPLRITVSKNTLENNEVEIQIRKSGEALPCAIDSVADKVTELLQD 571 >gi|148545068|ref|YP_001272438.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Lactobacillus reuteri DSM 20016] gi|148532102|gb|ABQ84101.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Lactobacillus reuteri DSM 20016] Length = 601 Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats. Identities = 72/441 (16%), Positives = 155/441 (35%), Gaps = 36/441 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + RD + ++L L + + G+ WLP G + I + + G Sbjct: 189 KRQEAKERDHRVIGNQLDLF--FVDPKVGAGLPYWLPKGATIRRTIERYIIDREVADGYQ 246 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYR 126 + P L + D + SG ++ Y +M D D M P + +++ HI+SYR Sbjct: 247 HVYTPVLMNLDAYKTSGHWEHYRDDMFPPMDMGDGEMLELRPMNCPSHIQVYKHHIRSYR 306 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ + R E G+ R RE + D ++F + + K+ + ++ Sbjct: 307 DLPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVTLDQIRSE-FAKILKLIMSVY 365 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + R + + + + + + DD+ Sbjct: 366 EDFDITDYSFRLSLRD-------------PKNVKKYYANDEMWEKSQSMLKSAMDDLNLD 412 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y D+ + +L ++ +S ++ F ++ ++ G Sbjct: 413 YYEAEGEAAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----GLSYVGQ 461 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DGK+H + +G M A + + G W I +++ + Sbjct: 462 DGKEHQPVMIHRGVVGTMERFMAYLTEIYKGAFPTWLAPEQVH-----IIPVNEEAHGEY 516 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + ++ V D E++G + A P ++VG +++ V ++ Sbjct: 517 ADDLAKKMKAANIRVNVDHRNEKMGYKIREAQTQKVPYTLVVGDDEKNNNGVSVRKYGEK 576 Query: 425 IREDMSLEEVINYASHRFSNN 445 + +MS E +N ++ Sbjct: 577 EQNEMSQEAFMNEILEDIASY 597 >gi|184154400|ref|YP_001842741.1| threonyl-tRNA synthase [Lactobacillus reuteri JCM 1112] gi|227364219|ref|ZP_03848315.1| threonine--tRNA ligase [Lactobacillus reuteri MM2-3] gi|325683422|ref|ZP_08162938.1| threonine--tRNA ligase [Lactobacillus reuteri MM4-1A] gi|183225744|dbj|BAG26261.1| threonyl-tRNA synthase [Lactobacillus reuteri JCM 1112] gi|227070764|gb|EEI09091.1| threonine--tRNA ligase [Lactobacillus reuteri MM2-3] gi|324977772|gb|EGC14723.1| threonine--tRNA ligase [Lactobacillus reuteri MM4-1A] Length = 627 Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats. Identities = 72/441 (16%), Positives = 155/441 (35%), Gaps = 36/441 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + RD + ++L L + + G+ WLP G + I + + G Sbjct: 215 KRQEAKERDHRVIGNQLDLF--FVDPKVGAGLPYWLPKGATIRRTIERYIIDREVADGYQ 272 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYR 126 + P L + D + SG ++ Y +M D D M P + +++ HI+SYR Sbjct: 273 HVYTPVLMNLDAYKTSGHWEHYRDDMFPPMDMGDGEMLELRPMNCPSHIQVYKHHIRSYR 332 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ + R E G+ R RE + D ++F + + K+ + ++ Sbjct: 333 DLPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVTLDQIRSE-FAKILKLIMSVY 391 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + R + + + + + + DD+ Sbjct: 392 EDFDITDYSFRLSLRD-------------PKNVKKYYANDEMWEKSQSMLKSAMDDLNLD 438 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y D+ + +L ++ +S ++ F ++ ++ G Sbjct: 439 YYEAEGEAAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----GLSYVGQ 487 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DGK+H + +G M A + + G W I +++ + Sbjct: 488 DGKEHQPVMIHRGVVGTMERFMAYLTEIYKGAFPTWLAPEQVH-----IIPVNEEAHGEY 542 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + ++ V D E++G + A P ++VG +++ V ++ Sbjct: 543 ADDLAKKMKAANIRVNVDHRNEKMGYKIREAQTQKVPYTLVVGDDEKNNNGVSVRKYGEK 602 Query: 425 IREDMSLEEVINYASHRFSNN 445 + +MS E +N ++ Sbjct: 603 EQNEMSQEAFMNEILEDIASY 623 >gi|307246760|ref|ZP_07528828.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255744|ref|ZP_07537547.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260196|ref|ZP_07541905.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852335|gb|EFM84572.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861304|gb|EFM93295.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865741|gb|EFM97620.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 571 Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats. Identities = 122/243 (50%), Positives = 158/243 (65%), Gaps = 1/243 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHVDKASLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V DF E + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDFAANIELAEAV 239 Query: 241 DII 243 + Sbjct: 240 AVG 242 Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 112/207 (54%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPM 298 D ++ + A +D+ N D P+ K V RGIEVGHIF GTKYS M Sbjct: 364 DGKHYFNVNWERDAAMPEVADLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 AT +G DGK + MG YGIG RVVAA IE HD + I D +APF ++++ + Sbjct: 424 KATVQGEDGKPLVMTMGCYGIGVTRVVAAAIEQHHDERGIIWPSDEIAPFTVAIVPMNMH 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + E++Y L G DV +DD E+ G FA +L+G P V++G K +++ ++ Sbjct: 484 KSESVQQFSEELYRTLKAQGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K+R TG ++ ++ ++++ + Sbjct: 544 EYKNRRTGEKQMIAKDQLLAFLKENVK 570 >gi|303252707|ref|ZP_07338869.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248901|ref|ZP_07530912.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302648446|gb|EFL78640.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854596|gb|EFM86788.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 571 Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats. Identities = 122/243 (50%), Positives = 158/243 (65%), Gaps = 1/243 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHVDKASLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V DF E + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDFAANIELAEAV 239 Query: 241 DII 243 + Sbjct: 240 AVG 242 Score = 177 bits (448), Expect = 4e-42, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 111/207 (53%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPM 298 D ++ + A +D+ N D P+ K V RGIEVGHIF GTKYS M Sbjct: 364 DGKHYFNVNWERDAAMPEVADLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 AT +G DGK + MG YGIG RVVAA IE HD + I D +APF ++++ + Sbjct: 424 KATVQGEDGKPLVMTMGCYGIGVTRVVAAAIEQHHDDRGIIWPSDEIAPFTVAIVPMNMH 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + E++Y L DV +DD E+ G FA +L+G P V++G K +++ ++ Sbjct: 484 KSESVQQFSEELYRTLKAQDVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLANGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K+R TG ++ ++ ++++ + Sbjct: 544 EYKNRRTGEKQMIAKDQLLAFLKENVK 570 >gi|50751644|ref|XP_422493.1| PREDICTED: similar to Prolyl-tRNA synthetase (mitochondrial)(putative) [Gallus gallus] Length = 470 Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats. Identities = 151/430 (35%), Positives = 217/430 (50%), Gaps = 37/430 (8%) Query: 21 ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW 80 SH+LML+ G+IH S G Y LP ++++ + +I G ++++P+L SA+LW Sbjct: 64 RSHRLMLQGGLIHPASPGCYHLLPPAVRSMEKLIRLIDGAMRNIGGQKVNMPSLSSAELW 123 Query: 81 VESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMT-DIFRSHIKSYRNLPFTFYQIQLKF 139 SGR++ G E+ RLADR+ K GPTHEE +T + SYR LP YQ+ KF Sbjct: 124 RTSGRWEQMGPELFRLADRHGKEYCLGPTHEEAVTELVAAHSNLSYRQLPLRLYQVTRKF 183 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 RDE +PRFG++RSREF MKD Y+FD + E ++H+Y + +Y +F RLGL+ + +RA + Sbjct: 184 RDEPKPRFGLLRSREFYMKDMYTFDASEEAARHTYELVCTAYRSLFKRLGLRCVQVRAAT 243 Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 G IGG SHEF + AD GE ++ A Sbjct: 244 GTIGGTASHEFQLPADIGEDRLVLCPA--------------------------GHFAANV 277 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 V E+ K +RGIEVGH FY GTKYS +A F + K +MG YG+ Sbjct: 278 EMVDEEQTACPACGEKLTQSRGIEVGHTFYLGTKYSSVHNAAFYTPENKLQLAEMGCYGL 337 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC------EKIYARL- 372 G R++AA IE I WP +AP+++ I K + R A + + L Sbjct: 338 GVTRILAASIEVLSTEDSIRWPSLIAPYQVCFIPPKKGSREERGAALLEHLYDDVAEALP 397 Query: 373 SKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKV-EIKHRLTGIREDMS 430 G DV DD + IG + A+ LG+P V+ G + D V E+ + +G ++ Sbjct: 398 RLAG-DVVLDDRTQMTIGKRLKDANKLGYPYVVVAGRRVCEDPPVFEVWDQSSGTVLYLT 456 Query: 431 LEEVINYASH 440 E VI S Sbjct: 457 KEGVIELLSK 466 >gi|212213390|ref|YP_002304326.1| prolyl-tRNA synthetase [Coxiella burnetii CbuG_Q212] gi|212011800|gb|ACJ19181.1| prolyl-tRNA synthetase [Coxiella burnetii CbuG_Q212] Length = 566 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 130/237 (54%), Positives = 169/237 (71%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++FL ++E P DA +ASH+LM+R GM+ + + G+Y+WLPLG + L V ++REE Sbjct: 3 MKVSQFFLATVKETPADAVLASHQLMIRAGMLRKLASGLYTWLPLGLRVLQKVADVVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A LW ESGR+++YG E+LR+ DR+ +GPTHEEV+TDI R Sbjct: 63 MNRAGALELLMPIVQPASLWQESGRWEAYGAELLRIMDRHQNGFCFGPTHEEVITDIARQ 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSFDL +G + +Y KMF + Sbjct: 123 ELKSYKQLPLNFYQIQTKFRDEIRPRFGVMRSREFLMKDAYSFDLDEKGMQAAYEKMFDA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF RLGL + A++G IGGD SHEF VLAD GE V S D+ E Sbjct: 183 YRRIFTRLGLNFRAVLADTGAIGGDYSHEFQVLADVGEDTVVYSD-ESDYAANIEKA 238 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 82/203 (40%), Positives = 112/203 (55%), Gaps = 4/203 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLP 297 DD +N E+ P + +D+ D P+ K ARGIEVG +F G KYS Sbjct: 365 DDFHWINVNWER-DVPLGSVADIRKVVEGDISPDGKGRLRFARGIEVGQVFQLGDKYSRQ 423 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 M+AT GK Y+QMG YGIG R VAA IE +HD +GIIWP +APF I+L+ + H Sbjct: 424 MNATVVDELGKSRYLQMGCYGIGVSRTVAAAIEQNHDERGIIWPTPMAPFFIALVPVNMH 483 Query: 358 DQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 R+ACEK+Y L G +V WDD E+ G FA DL+G P ++++ + V Sbjct: 484 KSYRVREACEKLYNELIDAGYEVLWDDRKERPGVMFADMDLIGIPHRLVISESGLDRGIV 543 Query: 417 EIKHRLTGIREDMSLEEVINYAS 439 E K R + E++SLE V++ Sbjct: 544 EYKARKSKEAENVSLENVLSVFR 566 >gi|209364247|ref|YP_001425332.2| prolyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111] gi|207082180|gb|ABS76694.2| prolyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111] Length = 566 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 130/237 (54%), Positives = 169/237 (71%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++FL ++E P DA +ASH+LM+R GM+ + + G+Y+WLPLG + L V ++REE Sbjct: 3 MKVSQFFLATVKETPADAVLASHQLMIRAGMLRKLASGLYTWLPLGLRVLQKVADVVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A LW ESGR+++YG E+LR+ DR+ +GPTHEEV+TDI R Sbjct: 63 MNRAGALELLMPIVQPASLWQESGRWEAYGAELLRIMDRHQNGFCFGPTHEEVITDIARQ 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSFDL +G + +Y KMF + Sbjct: 123 ELKSYKQLPLNFYQIQTKFRDEIRPRFGVMRSREFLMKDAYSFDLDEKGMQAAYEKMFDA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF RLGL + A++G IGGD SHEF VLAD GE V S D+ E Sbjct: 183 YRRIFTRLGLNFRAVLADTGAIGGDYSHEFQVLADVGEDTVVYSD-ESDYAANIEKA 238 Score = 164 bits (415), Expect = 3e-38, Method: Composition-based stats. Identities = 82/203 (40%), Positives = 112/203 (55%), Gaps = 4/203 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLP 297 DD +N E+ P + +D+ D P+ K ARGIEVG +F G KYS Sbjct: 365 DDFHWINVNWER-DVPLGSVADIRKVVEGDISPDGKGRLRFARGIEVGQVFQLGDKYSRK 423 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 M+AT GK Y+QMG YGIG R VAA IE +HD +GIIWP +APF I+L+ + H Sbjct: 424 MNATVVDELGKSRYLQMGCYGIGVSRTVAAAIEQNHDERGIIWPTPMAPFFIALVPVNMH 483 Query: 358 DQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 R+ACEK+Y L G +V WDD E+ G FA DL+G P ++++ + V Sbjct: 484 KSYRVREACEKLYNELIDAGYEVLWDDRKERPGVMFADMDLIGIPHRLVISESGLDRGIV 543 Query: 417 EIKHRLTGIREDMSLEEVINYAS 439 E K R + E++SLE V++ Sbjct: 544 EYKARKSKEAENVSLENVLSVFR 566 >gi|160900913|ref|YP_001566495.1| prolyl-tRNA synthetase [Delftia acidovorans SPH-1] gi|226699138|sp|A9BP65|SYP_DELAS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|160366497|gb|ABX38110.1| prolyl-tRNA synthetase [Delftia acidovorans SPH-1] Length = 581 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 117/237 (49%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ SHKLM R G+I + GIY+++P+G + + V AI+REE Sbjct: 1 MKASQFFISTLKEAPADAEVVSHKLMTRAGLIKKLGAGIYNYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+++P +Q A++W E+GR++ G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 61 MNRAGAVEVTMPVVQPAEMWEETGRFEKMGPELLRIKDRHGRDFVIQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE RPRFG+MR REF+MKDAYSFD + ++ SY M + Sbjct: 121 ELKSYKQLPKNFYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDKDRDTAQISYQTMRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R GL+ +RA+SG IGGDLS EF V+A TGE + D+ E Sbjct: 181 YKRIFDRFGLQYRAVRADSGAIGGDLSEEFQVIASTGEDAIVYC-PSSDYAANIEKA 236 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 73/188 (38%), Positives = 110/188 (58%), Gaps = 3/188 (1%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + RGIEVGH+FY GTKYS M+ATF +GK +MG Sbjct: 392 VVADLRNVVAGDKSPDGAGELAIERGIEVGHVFYLGTKYSQAMNATFLAENGKPSLFEMG 451 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSK 374 YGIG R+ AA IE +HD +GIIWPD++APF + + I + ++A EK++A L Sbjct: 452 CYGIGVTRLPAAAIEQNHDERGIIWPDAIAPFTVVVCPIGMDRSEPVKEAAEKLHAELLA 511 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +G DV DD GE+ G+ FA +L+G P +V++ + + + +VE +HR M+ +V Sbjct: 512 LGVDVILDDRGERPGAMFADWELIGVPHRVVLSDRGLKEGQVEYQHRRDTEATKMAAADV 571 Query: 435 INYASHRF 442 + + R Sbjct: 572 LGHLKQRL 579 >gi|325298803|ref|YP_004258720.1| threonyl-tRNA synthetase [Bacteroides salanitronis DSM 18170] gi|324318356|gb|ADY36247.1| threonyl-tRNA synthetase [Bacteroides salanitronis DSM 18170] Length = 647 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 78/445 (17%), Positives = 150/445 (33%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L KG+ WLP G + +R Q R Sbjct: 231 EYLVMLEEAKKRDHRKIGKEMDLFM-FSDMVGKGLPMWLPKGTALRIRLQDFLRRIQARY 289 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + L+V SG Y YGK+ + + P + I+R+ Sbjct: 290 DYQEVMCPPIGNKLLYVTSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYRNSP 349 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP + R E G+ R R F DA+ F + + ++ Sbjct: 350 RSYRDLPLRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDE-FLRVMDII 408 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + ++ + D + + D + Sbjct: 409 SIVFKSMNFENFEAQISLR--------------DKVNREKYIGSDENWEKAEQAIVEACQ 454 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + VE A Y D + D++ ++ ++ Sbjct: 455 EKGLKAKVEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFQL 503 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GAD + H + G+M AV+ GK +W + + + Sbjct: 504 EYMGADNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LTPDQVAVLPISE 557 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + +++ L K DD E+IG + ++ P +IVG K ++ +V ++ Sbjct: 558 KFNEYADQVRLELKKYDIRALVDDRNEKIGRKIRDNEMKHIPYMLIVGEKEAANGEVSVR 617 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + + +EE + N Sbjct: 618 KQGEGDKGTVKIEEFAKNIAEEVHN 642 >gi|289550561|ref|YP_003471465.1| Threonyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] gi|315658055|ref|ZP_07910928.1| threonine--tRNA ligase [Staphylococcus lugdunensis M23590] gi|289180093|gb|ADC87338.1| Threonyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] gi|315496945|gb|EFU85267.1| threonine--tRNA ligase [Staphylococcus lugdunensis M23590] Length = 645 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 76/445 (17%), Positives = 154/445 (34%), Gaps = 33/445 (7%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD L L T G+ WLP G + I +++ Sbjct: 229 KAHLQLLEERRERDHRKIGKDLELFTNN-QLVGAGLPLWLPNGATIRREIERYIVDKEVS 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHI 122 G + P L + DL+ SG + Y +M ++ M+ P + I+++ Sbjct: 288 MGYDHVYTPVLANVDLYRTSGHWAHYRDDMFPPMKLDENEEMVLRPMNCPHHMMIYKNKP 347 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ R E ++ + + + P+ K + ++ Sbjct: 348 HSYRELPIRLAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKDEFKRVVHMIQ 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDD 241 ++ G + R D + + + D M S D+ Sbjct: 408 DVYKDFGFEDYTFRLS--------------YRDPEDKEKYMDDDDMWNKAESMLKEAVDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y DV ++ ++ + + +S ++ F ++ T Sbjct: 454 LGLPYVEAIGEAAFYGPKLDV---QVKTAMGKEETLSTAQLD----FLLPERF----ELT 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + G+DG+ H + G+ + + + +I +N+ H Sbjct: 503 YIGSDGEYHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPKQVEIIPVNVDLH---- 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D + L G V DD E++G + A + P Q++VG K V +++V ++ Sbjct: 559 YDYARNLQDELKSQGVRVEIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRQY 618 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + ++ + +E I + Sbjct: 619 GSQDQQTLERDEFIWNLVDEIRLKK 643 >gi|16272670|ref|NP_438888.1| prolyl-tRNA synthetase [Haemophilus influenzae Rd KW20] gi|260579822|ref|ZP_05847652.1| prolyl-tRNA synthetase [Haemophilus influenzae RdAW] gi|1174537|sp|P43830|SYP_HAEIN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|1573733|gb|AAC22388.1| prolyl-tRNA synthetase (proS) [Haemophilus influenzae Rd KW20] gi|260093106|gb|EEW77039.1| prolyl-tRNA synthetase [Haemophilus influenzae RdAW] Length = 572 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 146/428 (34%), Positives = 204/428 (47%), Gaps = 39/428 (9%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V ++REE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y IF+RLGL ++A++G IGG SHEF VLA +GE V DF E Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDFAANIELAEAI 239 Query: 236 -------------NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 D + ++ +VEQ+ P T K D + RG Sbjct: 240 AIGERQAPTAEMCLVDTPNAKTIAELVEQFNLPIEKTVKTLIVKGADENQPLVALIIRGD 299 Query: 283 EVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 + + F + G +GA+ + I + Sbjct: 300 HELNEIKAQKHPLVADPLEFADETEIKAKIGSGVGSLGAVNLNIPAIIDRTVALMSDFSC 359 Query: 343 SVAPFKISLINIKAHDQVCRDACEKIYA------------RLS-KVGCDV--FWDDMGEQ 387 N+ V + L K G +V + Q Sbjct: 360 GANIDGKHYFNVNWERDVAIPKVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIF-----Q 414 Query: 388 IGSQFAVA 395 +G +++ A Sbjct: 415 LGKKYSEA 422 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 110/208 (52%), Gaps = 4/208 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D ++ + D+ N D P+ K RGIEVGHIF G KYS M Sbjct: 364 DGKHYFNVNWERDVAIPKVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGKKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 AT +G DGK + MG YGIG RVVA+ IE HD + I D +APF ++++ + Sbjct: 424 KATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQHHDERGIIWPSDEIAPFTVAIVPMNMH 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + E++Y L G DV +DD E+ G FA +L+G P V++G K + + ++ Sbjct: 484 KSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLDNGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSN 444 E K+R TG +E +S +++++ + + N Sbjct: 544 EYKNRRTGEKEMISKDKLLSVLNEKLGN 571 >gi|253995828|ref|YP_003047892.1| prolyl-tRNA synthetase [Methylotenera mobilis JLW8] gi|253982507|gb|ACT47365.1| prolyl-tRNA synthetase [Methylotenera mobilis JLW8] Length = 573 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 115/235 (48%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F +E P +AE+ SH LM+R G+I + G+YSW+PLG + L V ++REE Sbjct: 1 MRASQFFFNTQKEAPNEAELQSHILMVRAGLIKRLGSGLYSWMPLGLRVLRKVERVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+ +P +Q +LW E+GR+ +G +ML++ DR+++ +GPTHEEV+TDI R Sbjct: 61 MNNAGALELLMPAVQPKELWEETGRWAVFGPQMLKIQDRHEREFCFGPTHEEVITDIARK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EIRSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFMMKDAYSFHTDFASLEQTYDTMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +F RLGLK ++A++G IGGD SHEF VLAD+GE + + DF E Sbjct: 181 YSNVFTRLGLKFRAVKADTGAIGGDGSHEFHVLADSGEDGLAYCET-SDFAANVE 234 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 70/186 (37%), Positives = 107/186 (57%), Gaps = 3/186 (1%) Query: 259 TSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D+ P+ K V RGIEVGHIF TKYS MSAT+ +G+ ++MG Sbjct: 387 VADIRNVVAGDASPDGKGVLSLCRGIEVGHIFQLRTKYSEAMSATYLDENGQTQVMEMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+V A IE +D +GII+P S+APF++ + I + + A +K++ L Sbjct: 447 YGIGVSRIVGAAIEQGNDERGIIFPKSMAPFEVVICAIGYDKSEAVQAATKKLHDELQAA 506 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD GE+ G FA ADL+G P ++++G + +++ VE K R + ++L V+ Sbjct: 507 GVDVLLDDRGERPGVMFAEADLMGIPHRLVIGERGLNEGNVEYKARTQADAQSVALASVV 566 Query: 436 NYASHR 441 + Sbjct: 567 EFVQKL 572 >gi|302121711|gb|ADK92877.1| threonyl-tRNA synthetase [Hypericum perforatum] Length = 721 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 79/445 (17%), Positives = 147/445 (33%), Gaps = 42/445 (9%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L +E R D L L + I + G+ W P G + ++ Sbjct: 312 KAYLHFKEEAKRRDHRRLGQDLDLFS--IQDEAGGGLVFWHPKGAIVRHIIEDAWKKMHI 369 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P + ADLW SG D Y + M D+ P + I++ Sbjct: 370 ANGYELLYTPHVAKADLWKISGHLDFYRENMFEQMKIEDEQYQLRPMNCPYHILIYKRKQ 429 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+ P ++ +R EL G+ R R F DA+ F L + + Sbjct: 430 NSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDE-IRGVLDLT 488 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I G + + P + + D + DD Sbjct: 489 EEILLLFGFSRYEVNLSTRP-----------------EKAVGGDEIWDKATNALRNALDD 531 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ K+ D+L + S ++ F ++ T Sbjct: 532 KGWDYEIDEGGGAFYGPKIDL---KIEDALGRKWQCSTIQVD----FNLPQRFD----IT 580 Query: 302 FKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + A + + +G++ V+ + +P + P ++ ++ + + Sbjct: 581 YVDATSEKKRPILIHRAVLGSLERFFGVLI---EHYAGDFPLWLTPIQVRVLPVTDN--- 634 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + C ++ +L G GE++ A+ PL +VG K V V ++ Sbjct: 635 QLEFCNEVTRKLKDSGVRAEV-CHGERLPKLIRNAEKQKVPLMAVVGPKEVETQTVTVRS 693 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R +G + +++ I+ Sbjct: 694 RSSGDVGTIDIDDFISRIKSTVEER 718 >gi|259502210|ref|ZP_05745112.1| threonine-tRNA ligase [Lactobacillus antri DSM 16041] gi|259169828|gb|EEW54323.1| threonine-tRNA ligase [Lactobacillus antri DSM 16041] Length = 600 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 77/441 (17%), Positives = 153/441 (34%), Gaps = 36/441 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + D + ++L L + + G+ W+P G + I + + G Sbjct: 188 KRQEAREHDHRVIGNQLDLF--FVDPKVGAGLPYWMPKGATIRRTIERYIIDREVADGYE 245 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYR 126 + P L + D + SG ++ Y +M D D M P + I++ HI+SYR Sbjct: 246 HVYTPVLMNLDAYKTSGHWEHYRDDMFPPMDMGDGEMLEIRPMNCPSHIQIYKHHIRSYR 305 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ + R E G+ R RE + D ++F + + K+ + ++ Sbjct: 306 DLPMRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVAVDQIRDE-FAKILNLIMDVY 364 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + R + + + + + D DD+ Sbjct: 365 KDFDITDYSFRLSLRD-------------PKNKEKYYGNDEMWDESQKLLKAAMDDLNLD 411 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y D+ + +L ++ +S ++ FG ++ G Sbjct: 412 YYEAEGEAAFYGPKLDIQTKT---ALGNDETMSTIQLDFMQPDRFG--------LSYVGK 460 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DGK+H + +G M A + + G W I D+ D Sbjct: 461 DGKEHMPVMIHRGIVGTMERFVAYLTEIYKGAFPTWLAPEQVH-----IIPVSDEKHGDY 515 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ ++ V DD E++G + A P ++VG V D+ V ++ Sbjct: 516 AKQLADKMKAAQIRVVVDDRNEKMGYKIREAQTQKVPYTLVVGDDEVKDNAVSVRKYGEE 575 Query: 425 IREDMSLEEVINYASHRFSNN 445 + MS + +N ++ Sbjct: 576 AQNSMSQDAFMNEILADIASY 596 >gi|204636657|gb|ACI01751.1| putative threonyl-tRNA synthetase [Escherichia coli] Length = 652 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 72/436 (16%), Positives = 141/436 (32%), Gaps = 39/436 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + + RD +L L ++ G W P G ++ A +R G Sbjct: 243 WLEKTAEAEKRDHRKLGRELDLF--HFQDNAPGAVFWHPRGWTIFQSLIAYMRSRHEVAG 300 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E++ P + LW SG +D+Y M + + P + +F+ IKSY Sbjct: 301 YVEVNTPDVMDRSLWEISGHWDNYRDHMFTTQTEDGRNFALKPMNCPGAVSLFKYGIKSY 360 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R E G++R R F DA+ F + + L I Sbjct: 361 RDLPVRLSEFGKVHRYEPSGSLHGLLRVRHFTQDDAHIFCTLQQVEGEC-KSILQLVLDI 419 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + + ++ + P S D + + + Sbjct: 420 YKQFGFEEVAIKLSTRPEKR-----------------MGSDADWDRLENALSASLEAQGL 462 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 S+ A Y + L D++ + + +++ + Sbjct: 463 QWSVNPGEGAFYGPKLEF---VLRDAIGRDWQCGTLQVDMNLP--------ERFDIGYIA 511 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + G++ ++ + P ++P + ++ I Sbjct: 512 EDGSTKRPVMLHRALFGSLERFTGILL---EHYVGKLPAWLSPVQAVVMTITDK---QHH 565 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E++ L K G D E+IG + L P +IVG + ++V ++ R Sbjct: 566 YAEQVLKALRKKGLRCEADLRNEKIGFKIREQTLARIPYLLIVGDAEENAARVTVRDRTG 625 Query: 424 GIREDMSLEEVINYAS 439 + L E + Sbjct: 626 RCMGTLLLNEAADAIK 641 >gi|308272327|emb|CBX28933.1| Threonyl-tRNA synthetase [uncultured Desulfobacterium sp.] Length = 637 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 69/443 (15%), Positives = 141/443 (31%), Gaps = 41/443 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + R+ L L + H + G+ + P G + + + + E G Sbjct: 227 YLHFIEEAKKRNHRKIGMVLDLFS--FHDEAPGMPFFHPKGMSVWEALISYWKIEHRAAG 284 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E P + + LW SG +++Y + M ++ P + +F SY Sbjct: 285 YVETKTPIMLNRSLWERSGHWENYRENMYTSV-VDETEYAIKPMNCPGGMLLFGMKPHSY 343 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 ++LP +I L R EL G+ R R F DA+ F + L++ Sbjct: 344 KDLPLRSAEIGLVHRHELSGVLSGLFRVRAFHQDDAHIFMTP-----EQIESEILGVLKL 398 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 R+ F + T + + + + Sbjct: 399 VERIYSTFGLS--------------FHLELSTRPEKSIGNDEQWAVATKGLESALKTYGV 444 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y D+H + D+L + +++ ++ Sbjct: 445 DYKTNEGDGAFYGPKIDIH---IKDALGRTWQCGTVQLDMALP--------ERFDLSYID 493 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + G++ ++ + +P +AP + +L+ I Sbjct: 494 KNNEKCRPIMIHRVIYGSIERFFGILI---EHFAGKFPLWMAPVQAALLPIN---DELIP 547 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 I L K G D E + + A L PL + G K + V +++ Sbjct: 548 YAAGIRDVLEKEGIRTELDSRTESLKKKIRDAQLSYVPLIITCGPKEMESGTVSVRNLSG 607 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 I+ +++E+ + + + Sbjct: 608 KIKYGVTIEDFVKIVLFQIKERK 630 >gi|258644607|dbj|BAI39857.1| putative threonyl-tRNA synthetase [Oryza sativa Indica Group] Length = 749 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 78/446 (17%), Positives = 159/446 (35%), Gaps = 38/446 (8%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R +Y + + RD + L HQ S G +LP G + + +R++ Sbjct: 341 RLKEYKHLLEEAKKRDHRLLGQTQDLF--FFHQLSPGSCFFLPHGAIIYNKLMDFLRQQY 398 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G E+ P + + LW SG +Y + M + + + P + +F Sbjct: 399 RDRGYQEVLSPNIYNMQLWETSGHAANYKENMF-VFEIEKQEFGLKPMNCPGHCLMFEHR 457 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP + R+EL G+ R R F DA+ F K + Sbjct: 458 VRSYRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCR-ESQIKDEVKAVLDF 516 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++ G K + + P E + + Sbjct: 517 INYVYEIFGFKYE-LELSTRPEKYLGDIE-----------------TWNKAEQQLTEALN 558 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I E A Y D+ +FD+L + + ++ F ++ L SA Sbjct: 559 EFGKPWQINEGDGAFYGPKIDIG---VFDALKRKFQCATLQLD----FQLPLRFKLTYSA 611 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + V + +G++ + A++ + WP ++P + + +I ++ Sbjct: 612 E--DEAKLERPVMIHRAILGSVERMFAILL---EHYNGKWPLWLSPRQAIVCSISSNS-- 664 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + +++ AR+ + G V D+ I + A L F ++VG++ +V ++ Sbjct: 665 -VEYAKQVRARIHEAGFHVAIDETDRTIQKKVREAQLAQFNYILVVGAQEAETGQVSVRV 723 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R +S++++I + + Sbjct: 724 RDKAELATVSIDDIITRFKEEVAAYK 749 >gi|58425026|gb|AAW74063.1| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 595 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 116/250 (46%), Positives = 156/250 (62%), Gaps = 1/250 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 32 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 91 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 92 MDRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYSPTAEEAAAEFARQ 151 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT Y+ M + Sbjct: 152 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDADMAREYDNMRAA 211 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE + D+ E Sbjct: 212 YTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGEDSLAF-STGSDYAANVETASAA 270 Query: 241 DIISLNSIVE 250 + E Sbjct: 271 LPAPRAAASE 280 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 1/193 (0%) Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 + P + + + + ARGIEVGH+F G++Y+ + AT Sbjct: 401 NWGRDLPEPETVADVRNVVEGERAADGGELRLARGIEVGHVFQLGSQYAQALQATVIDEG 460 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDAC 365 GK ++MG YGIG R+VAA IE +HD GIIWP +AP+++ + I D A Sbjct: 461 GKVAVMKMGCYGIGISRIVAAAIEQNHDDAGIIWPAPMAPWQVVVCVINPKQDAQVVSAA 520 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 + + L G D DD G + G+ FA +LLG P +V+V + ++ E + R Sbjct: 521 QALLDELIAAGLDAALDDRGLRPGAMFADMELLGIPHRVVVSERGLAAGTFEYRARTAAA 580 Query: 426 REDMSLEEVINYA 438 E++ + + Sbjct: 581 AENLDKAGLFSRL 593 >gi|153808043|ref|ZP_01960711.1| hypothetical protein BACCAC_02329 [Bacteroides caccae ATCC 43185] gi|149129652|gb|EDM20866.1| hypothetical protein BACCAC_02329 [Bacteroides caccae ATCC 43185] Length = 646 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 79/444 (17%), Positives = 150/444 (33%), Gaps = 39/444 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD ++ L KG+ WLP G + +R Q R Sbjct: 231 YLALLEEAKKRDHRKIGKEMQLFM-FSETVGKGLPMWLPKGTALRLRLQDFLRRIQTRYD 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P + + L+V SG Y YGK+ + + P + +I+++ + Sbjct: 290 YQEVITPPIGNKLLYVTSGHYAKYGKDAFQPIHTPEEGEEYFLKPMNCPHHCEIYKNFPR 349 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP + R E G+ R R F DA+ F + + ++ Sbjct: 350 SYKDLPLRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDE-FLRVMDIIS 408 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +F + ++ + D + + D + + Sbjct: 409 IVFRSMNFQNFEAQISLR--------------DKVNREKYIGSDDNWEKAEQAIIEACEE 454 Query: 243 ISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 L + +E A Y D + D++ ++ ++ Sbjct: 455 KGLPAKIEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFELE 503 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G+D + H + G+M AV+ GK +W + I + Sbjct: 504 YMGSDNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LTPEQVVILPISEK 557 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D E++ L DD E+IG + ++ P +IVG K + +V ++ Sbjct: 558 FNDYAEQVKMYLKTHEIRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVSVRR 617 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 + G + M EE + N Sbjct: 618 QGEGDKGTMKFEEFAKILNEEVQN 641 >gi|124023562|ref|YP_001017869.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303] gi|166225478|sp|A2CAU4|SYT_PROM3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123963848|gb|ABM78604.1| Threonyl-tRNA synthatase [Prochlorococcus marinus str. MIT 9303] Length = 640 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 150/442 (33%), Gaps = 41/442 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L L+E RD + ++ L + + G+ W G + IRE + Sbjct: 229 KAYLKRLEEAEKRDHRRIAKQMSLF--HTQEEAPGMIFWHAKGWAIYQVLEQYIRETLSL 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P + LW +SG ++ + +M ++ P + IF +K Sbjct: 287 HAYQEIRTPQVVDRSLWEKSGHWEKFKDDMFTTT-SENREYAIKPMNCPCHVQIFNQGLK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F+ DA+ F T + +K Sbjct: 346 SYRDLPIRLAEFGSCLRNEPSGSLHGLMRVRNFVQDDAHIFC-TELQVQEEVSKFIDLVF 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 I+ G S+ ++ + P S E D + + D Sbjct: 405 EIYRSFGFDSVLIKLSTRPEKRVGSDE-----------------IWDKSEKALSDALDAK 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 ++ A Y + L D L + ++ G A++ Sbjct: 448 GLAWDLLPGEGAFYGPKIEF---SLKDCLGRVWQCGTIQVDFSMPERLG--------ASY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D + + +G+ ++ + P +AP +++++ I + Sbjct: 497 VAEDSQRRTPVMLHRAILGSFERFIGILI---EHYAGRMPVWLAPVQVAVMGITDRNA-- 551 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 C+ + +LS + D E+IG + L P +I+G K +V ++ R Sbjct: 552 -QTCQDVCKKLSALEYRTEVDLRNEKIGFKVREHTLQRVPFLIIIGDKEQQSGEVAVRTR 610 Query: 422 LTGIREDMSLEEVINYASHRFS 443 M L I+ + Sbjct: 611 EGKDFGSMPLNSFISLLDEAIA 632 >gi|122879049|ref|YP_199448.6| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331] gi|162319805|ref|YP_449766.2| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188578630|ref|YP_001915559.1| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A] gi|114152279|sp|Q2P7I5|SYP_XANOM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114152280|sp|Q5H4Q7|SYP_XANOR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701357|sp|B2SPG9|SYP_XANOP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|188523082|gb|ACD61027.1| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 564 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 116/250 (46%), Positives = 156/250 (62%), Gaps = 1/250 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 1 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 61 MDRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYSPTAEEAAAEFARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT Y+ M + Sbjct: 121 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDADMAREYDNMRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE + D+ E Sbjct: 181 YTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGEDSLAF-STGSDYAANVETASAA 239 Query: 241 DIISLNSIVE 250 + E Sbjct: 240 LPAPRAAASE 249 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 1/193 (0%) Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 + P + + + + ARGIEVGH+F G++Y+ + AT Sbjct: 370 NWGRDLPEPETVADVRNVVEGERAADGGELRLARGIEVGHVFQLGSQYAQALQATVIDEG 429 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDAC 365 GK ++MG YGIG R+VAA IE +HD GIIWP +AP+++ + I D A Sbjct: 430 GKVAVMKMGCYGIGISRIVAAAIEQNHDDAGIIWPAPMAPWQVVVCVINPKQDAQVVSAA 489 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 + + L G D DD G + G+ FA +LLG P +V+V + ++ E + R Sbjct: 490 QALLDELIAAGLDAALDDRGLRPGAMFADMELLGIPHRVVVSERGLAAGTFEYRARTAAA 549 Query: 426 REDMSLEEVINYA 438 E++ + + Sbjct: 550 AENLDKAGLFSRL 562 >gi|84366334|dbj|BAE67492.1| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 583 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 116/250 (46%), Positives = 156/250 (62%), Gaps = 1/250 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 20 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 79 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 80 MDRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYSPTAEEAAAEFARQ 139 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT Y+ M + Sbjct: 140 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDADMAREYDNMRAA 199 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE + D+ E Sbjct: 200 YTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGEDSLAF-STGSDYAANVETASAA 258 Query: 241 DIISLNSIVE 250 + E Sbjct: 259 LPAPRAAASE 268 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 1/193 (0%) Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 + P + + + + ARGIEVGH+F G++Y+ + AT Sbjct: 389 NWGRDLPEPETVADVRNVVEGERAADGGELRLARGIEVGHVFQLGSQYAQALQATVIDEG 448 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDAC 365 GK ++MG YGIG R+VAA IE +HD GIIWP +AP+++ + I D A Sbjct: 449 GKVAVMKMGCYGIGISRIVAAAIEQNHDDAGIIWPAPMAPWQVVVCVINPKQDAQVVSAA 508 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 + + L G D DD G + G+ FA +LLG P +V+V + ++ E + R Sbjct: 509 QALLDELIAAGLDAALDDRGLRPGAMFADMELLGIPHRVVVSERGLAAGTFEYRARTAAA 568 Query: 426 REDMSLEEVINYA 438 E++ + + Sbjct: 569 AENLDKAGLFSRL 581 >gi|301169449|emb|CBW29049.1| prolyl-tRNA synthetase [Haemophilus influenzae 10810] Length = 572 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 146/428 (34%), Positives = 204/428 (47%), Gaps = 39/428 (9%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V ++REE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y IF+RLGL ++A++G IGG SHEF VLA +GE V DF E Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDFAANIELAEAI 239 Query: 236 -------------NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 D + ++ +VEQ+ P T K D + RG Sbjct: 240 AIGERQAPTAEMCLVDTPNAKTIAELVEQFNLPIEKTVKTLIVKGADENQPLVALIIRGD 299 Query: 283 EVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 + + F + G +GA+ + I + Sbjct: 300 HELNEIKAQKHPLVADPLEFADETEIKAKIGAGVGSLGAVNLNIPAIIDRTVALMSDFSC 359 Query: 343 SVAPFKISLINIKAHDQVCRDACEKIYA------------RLS-KVGCDV--FWDDMGEQ 387 N+ V + L K G +V + Q Sbjct: 360 GANIDGKHYFNVNWERDVAMPEVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIF-----Q 414 Query: 388 IGSQFAVA 395 +G +++ A Sbjct: 415 LGKKYSEA 422 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 111/208 (53%), Gaps = 4/208 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D ++ + D+ N D P+ K RGIEVGHIF G KYS M Sbjct: 364 DGKHYFNVNWERDVAMPEVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGKKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 +AT +G DGK + MG YGIG RVVA+ IE HD + I D +APF ++++ + Sbjct: 424 NATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQHHDDRGIIWPSDEIAPFTVAIVPMNMH 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + E++Y L G DV +DD E+ G FA +L+G P V++G K + + ++ Sbjct: 484 KSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLDNGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSN 444 E K+R TG +E +S +++++ + + N Sbjct: 544 EYKNRRTGEKEMISKDKLLSVLNEKLGN 571 >gi|227890560|ref|ZP_04008365.1| threonyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741] gi|227867498|gb|EEJ74919.1| threonyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741] Length = 649 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 151/443 (34%), Gaps = 37/443 (8%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 L +E RD + ++L L + + G+ W+P G + I +++ G Sbjct: 235 LQRQKEARERDHRVIGNELDLF--FVDPKVGAGLPYWMPNGATIRRVIERYIIDKEVAWG 292 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKS 124 + P L + +L+ +SG +D Y ++M D D M P + ++ H +S Sbjct: 293 FQHVYTPVLANLNLYKQSGHWDHYREDMFPPMDMGDGEMLELRPMNCPSHIQVYNHHKRS 352 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR LP ++ + R E + + + + P+ + + + Sbjct: 353 YRELPLRIAELGMMHRYEKSGALTGLSRVREMTLNDGHDFIEPDHIEDEIKTLIKLMTEV 412 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS-ENTDFDDII 243 ++ + R D T+ + D M S DD+ Sbjct: 413 YNDFDITDYRFRLS--------------YRDPKNTEKYFDDDEMWEKSQSKLKAAMDDMG 458 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 E A Y DV + +L + +S ++ F ++ + Sbjct: 459 LEYFEAEGEAAFYGPKIDVQTKT---ALGGEETLSTIQLD----FLLPERFD----LKYI 507 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 GADG++H + + M A + + G W + I + + Sbjct: 508 GADGEEHRPVMVHRGIVSTMERFTAYLTEMYKGAFPTWLAPHQ-----VDIIPVKNDLHM 562 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D + ++L G V DD E++G + A + P +++G + VS+ V ++ Sbjct: 563 DYVNDLSSKLRAHGIRVTVDDRNEKMGYKIRQAQVNKIPYTLVIGDEEVSNGTVTVRKYG 622 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 M+ E N N Sbjct: 623 EEKTNTMTKAEFKNLLFEDIENY 645 >gi|33862697|ref|NP_894257.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313] gi|73919817|sp|Q7V8D2|SYT_PROMM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|33634613|emb|CAE20599.1| Threonyl-tRNA synthatase [Prochlorococcus marinus str. MIT 9313] Length = 640 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 149/442 (33%), Gaps = 41/442 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L L+E RD + ++ L + + G+ W G + IRE + Sbjct: 229 KAYLKRLEEAEKRDHRRIAKQMSLF--HTQEEAPGMIFWHAKGWAIYQVLEQYIRETLSL 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P + LW +SG ++ + +M ++ P + IF +K Sbjct: 287 HDYQEIRTPQVVDRSLWEKSGHWEKFKDDMFTTT-SENREYAIKPMNCPCHVQIFNQGLK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F+ DA+ F T + +K Sbjct: 346 SYRDLPIRLAEFGSCLRNEPSGSLHGLMRVRNFVQDDAHIFC-TELQVQEEVSKFIDLVF 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G S+ ++ + P S E D + + D Sbjct: 405 EVYRSFGFDSVLIKLSTRPEKRVGSDE-----------------IWDKSEKALSDALDAK 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 ++ A Y + L D L + ++ G A++ Sbjct: 448 GLAWDLLPGEGAFYGPKIEF---SLKDCLGRVWQCGTIQVDFSMPERLG--------ASY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D + + +G+ ++ + G+ IW V + + + A Sbjct: 497 VAEDSQRRTPVMLHRAILGSFERFIGILIEHYAGRLPIWLAPVQVVVMGITDRNA----- 551 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 AC+ I +LS + D E+IG + L P +I+G K +V ++ R Sbjct: 552 -QACQDICKKLSALEYRTEVDLRNEKIGFKVREHTLQRVPFLIIIGDKEQQSGEVAVRTR 610 Query: 422 LTGIREDMSLEEVINYASHRFS 443 M L+ + + Sbjct: 611 EGKDFGSMPLKGFTSLLDEAIA 632 >gi|315186787|gb|EFU20545.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Spirochaeta thermophila DSM 6578] Length = 578 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 149/443 (33%), Gaps = 38/443 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L + + G+ W P G + + RE+ Sbjct: 168 QYLEHLKEVEKRDHRRLGKELDLFSVH-EEAGPGLIYWHPKGARIRLEIENFWREQHLAR 226 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + A LW SG Y + M + + P + I+++ ++S Sbjct: 227 GYEVLYTPHIGKAWLWETSGHLSFYKENMYAPMEVDKSDYYIKPMNCPFHIMIYKTRLRS 286 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + ++ +R E G++R R F DA+ F TPE + + L Sbjct: 287 YRELPLRWAELGTVYRYERSGVLHGLLRVRGFTQDDAHIFC-TPEQIEDEILETLRFSLF 345 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G + + P E + S + Sbjct: 346 MWKTFGFSDVKAYLSTRPDKSVGEPE-----------------RWEQATESLRKAIEREG 388 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D+ K+ D+L + S + F ++ T+ Sbjct: 389 LDYEVDEGGGAFYGPKIDI---KVRDALGREWQTSTIQFD----FNLPERFD----ITYV 437 Query: 304 GADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 ADG+ + +G++ ++ + G +W V I + V Sbjct: 438 DADGREKRPYMVHRALLGSLERFFGILVEHYGGAFPVWLAPVQVVVIPV------SDVFA 491 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++ L + G D +++ ++ A P VIVG + V ++ R Sbjct: 492 GYAQEVVRALREAGVRAEADLSADRMNAKIRKAQQEKIPYAVIVGQREQEGRTVSVRVRG 551 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 R ++L + + + R Sbjct: 552 GEQRNGVALGDFVEDVARRVHER 574 >gi|260220337|emb|CBA27773.1| Prolyl-tRNA synthetase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 580 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 119/237 (50%), Positives = 160/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++ + L+E P DAE+ SHKLM+R GMI + GIY+++P+G + + V AI+REE Sbjct: 1 MKASQFLISTLKEAPTDAEVVSHKLMMRAGMIKKLGAGIYNYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+++P +Q A+LW E+GR+D G E+LR+ DR+++ + PT EEV+TDI R Sbjct: 61 MNRAGAVELTMPVIQPAELWQETGRFDKMGPELLRIKDRHERDYVVQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE RPRFG+MR REF+MKDAYSFD + +K SY M + Sbjct: 121 EIKSYKQLPKNLYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDQDSAKASYQVMAKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R GL + A+SG IGGDLS EF V+A TGE + D+ E Sbjct: 181 YRRIFDRFGLTYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYCPT-SDYAANMEKA 236 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 75/188 (39%), Positives = 107/188 (56%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D+ P+ K V RGIEVGH+FY GTKYS M+ATF +GK +++MG Sbjct: 392 VADLRNVVEGDASPDGKGVLAIERGIEVGHVFYLGTKYSKAMNATFLDVNGKPQFMEMGC 451 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD-QVCRDACEKIYARLSKV 375 YGIG R+ AA IE +HD KGIIWPD++APF + L I + A +K+Y L Sbjct: 452 YGIGITRLPAAAIEQNHDDKGIIWPDALAPFTVVLCPINPDRFPDVKAAADKLYEELLSA 511 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G+ FA +L+G P +V +G + + + VE +HR + + E+ Sbjct: 512 GVDVILDDRNERPGAMFADWELIGVPHRVNIGDRGLKEGVVEYQHRRESAATSVPVAEIA 571 Query: 436 NYASHRFS 443 + R Sbjct: 572 SLLLGRLK 579 >gi|295106076|emb|CBL03619.1| prolyl-tRNA synthetase, family II [Gordonibacter pamelaeae 7-10-1-b] Length = 585 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 113/255 (44%), Positives = 169/255 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E+P DAEIASHKL+LR GMI + + G+Y++LPLG++ L V I+REE Sbjct: 7 MRMSELCVPTLKEDPTDAEIASHKLLLRAGMIRKTASGVYTFLPLGKRVLAKVERIVREE 66 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G+ E+ +P LQ +LW ESGR++ YG E++RL DR+D+ GPTHEE++T + R+ Sbjct: 67 MDAIGSQEIMMPALQPGELWHESGRWNDYGPELMRLVDRHDREFCLGPTHEELITALVRN 126 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP T YQIQ+KFRDE+RPRFG++RSREF+MKDAYSF + E + +Y+ M + Sbjct: 127 ELRSYKELPLTLYQIQVKFRDEIRPRFGLLRSREFIMKDAYSFHASQESLQKTYDDMSAA 186 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RI R+ + P+ A+SG IGG ++ EF+ LA+ GE ++ + + Sbjct: 187 YGRICERMDMDYRPVEADSGQIGGSVTCEFMALAEAGEAELVHCACGWAANAEAGDCLAR 246 Query: 241 DIISLNSIVEQWTAP 255 + +E+ P Sbjct: 247 PTVYDVPAMEKVATP 261 Score = 156 bits (395), Expect = 6e-36, Method: Composition-based stats. Identities = 77/191 (40%), Positives = 111/191 (58%), Gaps = 2/191 (1%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ + DS P+ ARGIEV +F G KYS M ATF DG + MG Sbjct: 381 EWADLCIVQPGDSCPKCGLPLEGARGIEVSQVFQLGDKYSKAMGATFMAEDGSEQPFLMG 440 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YG+G R +AA++E +D GI WP SVAP + ++ + D + A EK+ L+K+ Sbjct: 441 CYGVGVSRTMAAIVEQHNDENGIAWPFSVAPAHVCVLPLTVGDDEVQPAAEKLAGDLAKL 500 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G +FA ADL+G+PLQV+VG + +++ KVEIKHR TG R D+SL + Sbjct: 501 GLEVVIDDRKERAGVKFADADLVGWPLQVVVGKRGLAEGKVEIKHRKTGARRDISLMALT 560 Query: 436 NYASHRFSNNR 446 + + N + Sbjct: 561 DAVAFAQRNTK 571 >gi|259418221|ref|ZP_05742139.1| threonyl-tRNA synthetase [Silicibacter sp. TrichCH4B] gi|259345616|gb|EEW57460.1| threonyl-tRNA synthetase [Silicibacter sp. TrichCH4B] Length = 648 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 82/444 (18%), Positives = 150/444 (33%), Gaps = 45/444 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD ++ L + + + G+ W P G + + +R Q++ Sbjct: 234 KAHLTMLEEAAKRDHRKLGREMHLF--HMQEEAPGMVFWHPNGWRIYTTLQDYMRRMQDK 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIY-----GPTHEEVMTDIF 118 G +E++ P + + LW SG +D+Y + M + D A P + +F Sbjct: 292 GGYVEVNTPQVVNRKLWEASGHWDNYQENMFIVEVDEDHAREKAVNALKPMNCPCHIQVF 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F D + F T E + + Sbjct: 352 NQGLKSYRDLPLRMAEFGSCNRYEPSGAMHGIMRVRGFTQDDGHIFC-TEEQVEAETKEF 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +++ LG + ++ + P + E D + Sbjct: 411 VSFLAKVYQDLGFEKWRVKLSTRPEKRVGTEE-----------------SWDQAEAALAA 453 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + E A Y + L D++ + + I+ Sbjct: 454 GIQAAGYEYELQEGEGAFYGPKLEF---VLTDAIGRDWQCGTLQIDPNLP--------ER 502 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + AT+ G DG H + +G+ ++ H GK W S+ Sbjct: 503 LDATYIGQDGDKHRPLMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASIT---- 558 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++ A L G D E+I + + P+ + VG + V + V Sbjct: 559 --SEADDYVNEVVATLRAAGVRAEADIRNEKINYKVREHSVGKVPVILAVGHREVEERTV 616 Query: 417 EIKHRLTGIREDMSLEEVINYASH 440 ++ + SL V + Sbjct: 617 SVRRLGEKQTKVESLTNVTEELAK 640 >gi|309776920|ref|ZP_07671890.1| threonine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53] gi|308915331|gb|EFP61101.1| threonine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53] Length = 580 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 69/434 (15%), Positives = 143/434 (32%), Gaps = 37/434 (8%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD + +L L M+ +++ G+ +LP G + + EE + + P Sbjct: 180 AKKRDHKKLGRELGLF--MMSEYAPGMPFFLPNGMIIRNLLENFWYEEHTKENYQFIKTP 237 Query: 73 TLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + S +LW SG +++Y + M +D+ P + +F++ + SY++LP Sbjct: 238 IMMSKELWEVSGHWENYKENMYTTM-VDDREFAIKPMNCPGSLLVFKNGLHSYKDLPLRM 296 Query: 133 YQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 ++ R E G+ R R F DA+ F + ++ R++ GL Sbjct: 297 GELGQVHRHEASGALNGLFRVRTFTQDDAHIFMRPDQIEGE-VMRLIQFIDRVYSVFGLS 355 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ 251 + P E + + + + Sbjct: 356 YRI-ELSTRP----------------EKKYIGDLAIWEQSEKALADACVHAGKEYKVNPG 398 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A Y D H + DSL + +++ F Y + Sbjct: 399 DGAFYGPKLDFH---IKDSLGREWQCGTIQLDMNLPERFDLTYVEKDGSKV-------RP 448 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 V + G++ ++ G +W + + H + + ++ + Sbjct: 449 VMLHRVIFGSIERFIGILIEHFAGHFPVWLA-----PQQVSVVPVHHEKHLEYANEVNEK 503 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L +G D E++G + A L P Q+++G + + V ++ + M L Sbjct: 504 LLALGYRSKLDARNEKLGYRIREAQLSKIPYQLVIGDGEIENGSVTLRRAQSKKSLTMPL 563 Query: 432 EEVINYASHRFSNN 445 E+ I + Sbjct: 564 EDFIAMMNSAVEEK 577 >gi|166713436|ref|ZP_02244643.1| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 564 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 117/250 (46%), Positives = 156/250 (62%), Gaps = 1/250 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 1 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 61 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYSPTAEEAAAEFARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT Y+ M + Sbjct: 121 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDADMAREYDNMRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE + D+ E Sbjct: 181 YTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGEDSLAF-STGSDYAANVETASAA 239 Query: 241 DIISLNSIVE 250 + E Sbjct: 240 LPAPRAAASE 249 Score = 132 bits (333), Expect = 8e-29, Method: Composition-based stats. Identities = 57/176 (32%), Positives = 87/176 (49%), Gaps = 1/176 (0%) Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 + P + + + + ARGIEVGH+F G++Y+ + AT Sbjct: 370 NWGRDLPEPETVADVRNVVEGERAADGGELRLARGIEVGHVFQLGSQYAQALQATVIDEG 429 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDAC 365 GK ++MG YGIG R+VAA IE +HD GIIWP +AP+++ + I D A Sbjct: 430 GKVAVMKMGCYGIGISRIVAAAIEQNHDDAGIIWPAPMAPWQVVVCVINPKQDAQVVSAA 489 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + L G D DD G + G+ FA +LLG P +V+V + ++ E + R Sbjct: 490 QALLDELIAAGLDAALDDRGLRPGAMFADMELLGIPHRVVVSERGLAAGTFEYRAR 545 >gi|40063052|gb|AAR37908.1| prolyl-tRNA synthetase [uncultured marine bacterium 560] Length = 567 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 121/275 (44%), Positives = 173/275 (62%), Gaps = 3/275 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S +P ++E P DA+I SH+LM+R G++ + + G+YS+LP+G + + V IIREE Sbjct: 1 MKSSDLLIPTIKEAPNDAQIISHQLMIRAGLVSKLASGLYSYLPIGLRVIQKVEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++ A E+ +P Q A+LW ESGR++ YG E+LR DR+++ GPTHEEV+T+I + Sbjct: 61 MNKSLAQELLMPVAQPAELWQESGRWEEYGPELLRFKDRHERDFCLGPTHEEVITNIAKQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + +Y M + Sbjct: 121 YLRSYKQLPINFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHIDEASLGETYQVMHQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL+ + A+SG IGGD SHEF VLAD+GE + C + D+ + + Sbjct: 181 YCNIFDRLGLEYKVVLADSGAIGGDSSHEFHVLADSGEDAI-CFSNKSDYAANIDRAETL 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE--KLFDSLPE 273 E T ++ +LFD P+ Sbjct: 240 PQGEPEPPKETITVTETPDVKTIDDVCQLFDIKPK 274 Score = 147 bits (372), Expect = 3e-33, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 102/189 (53%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ K RGIEVGHIF GTKYS M+A G DGK + MG Sbjct: 379 VVADLRNVVSGDPSPDGKGKLEIKRGIEVGHIFQLGTKYSDAMNANVIGEDGKAVNMNMG 438 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSK 374 YGIG R+VAA IE +HD KGII+P+S+APF++ ++ I R +++Y + Sbjct: 439 CYGIGVTRIVAASIEQNHDDKGIIFPESIAPFQLVIVPINYNKSSRVRKLADELYEQFLS 498 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V D+ E+ G FA ++LLG P ++++ +E K R + ++ + Sbjct: 499 QGVEVLLDNRKERPGIMFADSELLGIPHRLVISDTHADSGNIEYKSRNEVDKIEIEFKAA 558 Query: 435 INYASHRFS 443 I++ + + Sbjct: 559 IDFILAKLA 567 >gi|270290442|ref|ZP_06196667.1| threonyl-tRNA synthetase [Pediococcus acidilactici 7_4] gi|304384676|ref|ZP_07367022.1| threonine--tRNA ligase [Pediococcus acidilactici DSM 20284] gi|270281223|gb|EFA27056.1| threonyl-tRNA synthetase [Pediococcus acidilactici 7_4] gi|304328870|gb|EFL96090.1| threonine--tRNA ligase [Pediococcus acidilactici DSM 20284] Length = 647 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 72/439 (16%), Positives = 149/439 (33%), Gaps = 38/439 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + + L L + + G+ W+P G + I +++ + G + Sbjct: 238 EARERDHRVIGNDLDLF--FVDPEVGAGLPYWMPNGATIRRTIERYIIDKEVQHGYQHVY 295 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLP 129 P L + D + SG + Y ++M D D M P + +++ HI+SYR LP Sbjct: 296 TPVLMNLDAYKTSGHWQHYREDMFPPMDMGDGEMLELRPMNCPSHIQVYKHHIRSYRELP 355 Query: 130 FTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 ++ + R E ++ + + + P+ + + K+ + ++ Sbjct: 356 LRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVAPDQIQEEFKKVLQLMVEVYRDFD 415 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIISLNSI 248 + R D T+ + D M S DD+ Sbjct: 416 ITDYTFRLS--------------YRDPENTEKYFDDDEMWNHSQSMLKAAMDDLGLDYVE 461 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 E A Y DV + +L + +S ++ F + GADG+ Sbjct: 462 AEGEAAFYGPKLDVQTKT---ALGNEETLSTIQLD----FMLP----KQFDLHYVGADGE 510 Query: 309 DHYVQMGSYGIG--AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 +H M G+ R A +IE + I D + + + Sbjct: 511 EHRPVMIHRGLVSTMERFTAYLIEMYKGAFPTWLAP------KQVTIIPVKDDLHGEYAD 564 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+ +++ V D E++G + A P ++VG + + V ++ Sbjct: 565 KLREQMADQDIRVEVDHRNEKMGYKIREAQTQKIPYILVVGDNEMDSNAVSVRRYGEDDS 624 Query: 427 EDMSLEEVINYASHRFSNN 445 + +S+++ + + Sbjct: 625 QTVSVDQFMQDIKADIDSY 643 >gi|260425980|ref|ZP_05779959.1| threonyl-tRNA synthetase [Citreicella sp. SE45] gi|260420472|gb|EEX13723.1| threonyl-tRNA synthetase [Citreicella sp. SE45] Length = 649 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 84/443 (18%), Positives = 146/443 (32%), Gaps = 44/443 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 KY + + RD ++ L + + G W P G ++ +R Q Sbjct: 233 LKKYLNFLEEAAKRDHRKLGREMDLF--HLQPEAPGQIFWHPNGWTVYTSLQDYMRRMQR 290 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDI 117 + G +E++ P + + LW ESG +++Y + M + R P + I Sbjct: 291 KDGYVEVNTPQVVNRKLWEESGHWENYRENMFIVEVDEEGAREKTINALKPMNCPCHVQI 350 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 F +KSYR+LP + R E G+MR R F DA+ F T + + K Sbjct: 351 FNHGLKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFC-TFDQIEEESKK 409 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 +I+ LG S ++ + P S E D + Sbjct: 410 FIDFLAKIYADLGFDSWRVKLSTRPEKRVGSEE-----------------SWDSMEEALA 452 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 I A YA + L D++ + + ++ Sbjct: 453 NACKAAGREFEIFPGEGAFYAPKLEF---VLTDAIGRDWQCGTLQLDPNLP--------E 501 Query: 297 PMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 + A + G DG+ H + +G+ ++ H GK W S+ Sbjct: 502 RLDANYVGQDGEKHRPIMLHRAVLGSFERFIGILIEEHSGKLPFWLAPRQVVVASIT--- 558 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 D + A L G D E+I + L P+ + VG + V + Sbjct: 559 ---SEADDYVHEAVAALRAAGVRAEADVRNEKINYKVREHSLGKVPVILAVGHREVEERT 615 Query: 416 VEIKHRLTGIREDMSLEEVINYA 438 V ++ + SL+E+ Sbjct: 616 VTVRRLGEKQTQVRSLDEIAAEL 638 >gi|255008477|ref|ZP_05280603.1| putative threonyl-tRNA synthetase [Bacteroides fragilis 3_1_12] gi|313146205|ref|ZP_07808398.1| threonine-tRNA ligase [Bacteroides fragilis 3_1_12] gi|313134972|gb|EFR52332.1| threonine-tRNA ligase [Bacteroides fragilis 3_1_12] Length = 646 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 76/445 (17%), Positives = 147/445 (33%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD ++ L KG+ WLP G + +R Q R Sbjct: 230 EYLALMEEAKKRDHRKIGKEMQLFM-FSDTVGKGLPMWLPKGTALRLRLQDFLRRIQTRY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + L+V SG Y YGK+ + + P + +I+++ Sbjct: 289 DYQEVITPPIGNKLLYVTSGHYAKYGKDAFQPIHTPEEGEEYFLKPMNCPHHCEIYKNFP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F + + ++ Sbjct: 349 RSYKDLPLRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKGE-FLRVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + + + D + + D + + Sbjct: 408 SIVFRSMDFTNFEAQISLR--------------DKVNREKYIGSDENWEKAEQAIIEACE 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + +E A Y D + D++ ++ ++ Sbjct: 454 EKGLKAKIEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFEL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G+D + H + G+M AV+ GK +W + I + Sbjct: 503 EYMGSDNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LTPEQVVILPISE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ L DD E+IG + ++ P +IVG K + +V ++ Sbjct: 557 KFNEYAEKVKTYLKTKEIRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVSVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M E+ + N Sbjct: 617 RQGEGDKGTMKFEDFGEILNEEVQN 641 >gi|145637732|ref|ZP_01793384.1| prolyl-tRNA synthetase [Haemophilus influenzae PittHH] gi|145269081|gb|EDK09032.1| prolyl-tRNA synthetase [Haemophilus influenzae PittHH] Length = 572 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 145/428 (33%), Positives = 203/428 (47%), Gaps = 39/428 (9%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V ++REE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y IF+RLGL ++A++G IGG SHEF VLA +GE V DF E Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDFAANIELAEAI 239 Query: 236 -------------NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 D + ++ +VEQ+ P T K D + RG Sbjct: 240 AIGERQAPTAEMCLVDTPNAKTIAELVEQFNLPIEKTVKTLIVKGADENQPLVALIIRGD 299 Query: 283 EVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 + + F + G +G + + I + Sbjct: 300 HELNEIKAQKHPLVADPLEFADETEIKAKIGAGVGSLGPVNLNIPAIIDRTVALMSDFSC 359 Query: 343 SVAPFKISLINIKAHDQVCRDACEKIYA------------RLS-KVGCDV--FWDDMGEQ 387 N+ V + L K G +V + Q Sbjct: 360 GANIDGKHYFNVNWERDVAMPEVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIF-----Q 414 Query: 388 IGSQFAVA 395 +G +++ A Sbjct: 415 LGKKYSEA 422 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 110/208 (52%), Gaps = 4/208 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D ++ + D+ N D P+ K RGIEVGHIF G KYS M Sbjct: 364 DGKHYFNVNWERDVAMPEVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGKKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 AT +G DGK + MG YGIG RVVA+ IE HD + I D +APF ++++ + Sbjct: 424 KATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQHHDERGIIWPSDEIAPFTVAIVPMNMH 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + E++Y L G DV +DD E+ G FA +L+G P V++G K + + ++ Sbjct: 484 KSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLDNGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSN 444 E K+R TG +E +S +++++ + + N Sbjct: 544 EYKNRRTGEKEMISKDKLLSVLNEKLGN 571 >gi|319788022|ref|YP_004147497.1| prolyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1] gi|317466534|gb|ADV28266.1| prolyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1] Length = 565 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 116/251 (46%), Positives = 160/251 (63%), Gaps = 1/251 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SHKLMLR GMI + + G+Y+W PLG + L V A++REE Sbjct: 1 MRLSRFHLHTTKETPADAELVSHKLMLRAGMIRKLAAGLYTWTPLGLRVLRKVEAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +PT+Q +LW E+GR+ +G ++L++ DR + + PT EE +TD R Sbjct: 61 MNRAGAVELQLPTIQPRELWEETGRWGKFGGQLLKIKDRKEAEYCFSPTAEEAITDFARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQI KFRDE+RPRFGVMR+REFLMKDAYSF ++ E Y M + Sbjct: 121 ELSSYKQLPVNFYQIHTKFRDEIRPRFGVMRAREFLMKDAYSFHVSDEDLAREYENMKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+R+F RLGL+ ++A+SG IGGD S EF VLAD+GE + D+ E Sbjct: 181 YIRVFGRLGLEFRAVQADSGAIGGDASQEFHVLADSGEDALAF-STASDYAANVETAQAA 239 Query: 241 DIISLNSIVEQ 251 + E+ Sbjct: 240 APGPRPAATEE 250 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 62/185 (33%), Positives = 91/185 (49%), Gaps = 2/185 (1%) Query: 258 ATSDVHNEKLFDSLPENKRV-SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D + + ARGIEVGH+F G KYS M T +GK MG Sbjct: 380 VVADIRNVVAGDRAADGGEIRLARGIEVGHVFQLGRKYSQAMGFTVLDENGKAVVPAMGC 439 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+VAA IE +HD GI+WP +AP+ +++ I D +A E + L Sbjct: 440 YGIGVSRIVAAAIEQNHDEAGIVWPVPMAPWTVAVCVINPKKDAQVDEAAESLLVELQAA 499 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G D DD G + G FA +L+G P +V+V ++ + E + R G E + +++ Sbjct: 500 GIDAVLDDRGLRPGPMFADMELIGIPHRVVVSARGLEAGTYEYRARSGGEAEALDRAQLL 559 Query: 436 NYASH 440 Sbjct: 560 ERLRQ 564 >gi|299144001|ref|ZP_07037081.1| threonine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518486|gb|EFI42225.1| threonine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 639 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 84/443 (18%), Positives = 153/443 (34%), Gaps = 41/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L T +H G + P G + + R Sbjct: 232 EYIERIEEAEKRDHRKLGRELDLFT--MHDEGPGFPFFHPNGMILRNELLGWWRNVLIEN 289 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + + LW SG +D Y + M + + P + T ++ ++ S Sbjct: 290 GYGEIQTPIILNEALWHRSGHWDHYKENM-YFTKIDGEDYAVKPMNCPGSTIVYSTNPHS 348 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + R EL G+ R R F DA+ + L P + KM Sbjct: 349 YRELPIRLSEFGQVHRHELSGALHGLFRVRTFTQDDAHVYCL-PSQIEEEVFKMIDLADY 407 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G K + + P +F+ +T + S + Sbjct: 408 LYSTFGFKYS-VELSTRP------EDFMGDIET-----------WNKAEESLKVALEKKN 449 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 SI E A Y D H E D++ + ++ F T+ Sbjct: 450 IKYSINEGDGAFYGPKIDFHLE---DAIGRTWQCGTIQLDFQMPVNFD--------LTYI 498 Query: 304 GADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G+ V + +G++ ++ GK +W + I + Sbjct: 499 NEKGEKARPVMLHRALLGSVERFMGILIEHFAGKFPLW------LSPIQVEIIPVSEKFA 552 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +++ +L G V+ D+ E++G + A L ++VG + V+ K+ ++ R Sbjct: 553 EFAKELEIKLKNTGLKVYLDERAEKVGYKIREAQLKKINYMLVVGEQEVNSGKLSVRKRN 612 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 +D +EE IN + Sbjct: 613 GEEIKDCEVEEFINILKSEIESK 635 >gi|152976185|ref|YP_001375702.1| prolyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189083487|sp|A7GRE9|SYP_BACCN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|152024937|gb|ABS22707.1| prolyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98] Length = 566 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 129/282 (45%), Positives = 172/282 (60%), Gaps = 1/282 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LPLG K L V IIREE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPLGLKVLHKVEHIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P LQ+A+LW ESGR+ SYG E++R+ DRND+ G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPALQAAELWQESGRWYSYGSELMRMKDRNDREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y+++F + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLFQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 + + E+ A E++ L + + Sbjct: 240 ATYTKSDEAEKALEKVATPDQKAIEEVSAFLNIEPSQCIKTM 281 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 72/186 (38%), Positives = 104/186 (55%), Gaps = 3/186 (1%) Query: 260 SDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ + D P+ K RGIEVGH+F GT+YS M+ATF +GK + MG Y Sbjct: 382 ADLRFIQEGDQSPDGKGTIRFARGIEVGHVFKLGTRYSEAMNATFLDENGKTKPLIMGCY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R VAA+ E +D G++WP +VAPF + +I + V R+ E IY L + G Sbjct: 442 GIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDVQREVAENIYTSLQEQGY 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V DD E+ G +FA ADL G P++V VG K + VE+K R T ++ +E++ Y Sbjct: 502 EVLLDDRTERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATNESAEVKVEDLHTY 560 Query: 438 ASHRFS 443 + Sbjct: 561 IADILK 566 >gi|312134482|ref|YP_004001820.1| prolyl-tRNA synthetase [Caldicellulosiruptor owensensis OL] gi|311774533|gb|ADQ04020.1| prolyl-tRNA synthetase [Caldicellulosiruptor owensensis OL] Length = 572 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 124/282 (43%), Positives = 168/282 (59%), Gaps = 1/282 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F+P L+E P DAEI SHKLMLR+G + Q S GIY +LPLG + L + I+REE Sbjct: 1 MKVSELFMPTLKETPSDAEIESHKLMLRSGFMRQLSSGIYVYLPLGYRVLRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ + L +LW ESGR+ +G EM R+ DRN++ GPTHEE T I R+ Sbjct: 61 MDRSGAQELHMSALMPKELWEESGRWAVFGPEMFRIKDRNEREYCLGPTHEEAFTYIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP YQIQ KFRDE RPRFGVMR REF MKDAYSFD+ +G SY KM+ + Sbjct: 121 EITSYRELPKILYQIQTKFRDERRPRFGVMRCREFTMKDAYSFDIDEKGLDISYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+RIF R GL + A++G +GG SHEF+V + GE ++ K + E + Sbjct: 181 YVRIFKRCGLDVKIVEADTGAMGGASSHEFMVPSSVGEAEIAYCKAC-GYAANLEKAECL 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 D N+ + + E+L + L + + + Sbjct: 240 DTPVENNEKPKEKQEVYTPNVKTIEELVNFLGIDSTRFVKTM 281 Score = 173 bits (438), Expect = 6e-41, Method: Composition-based stats. Identities = 68/194 (35%), Positives = 102/194 (52%), Gaps = 4/194 (2%) Query: 256 YAATSDVHNEKLFDSLPEN---KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 +D+ N D P+ K RGIEVGHIF GTKY+ + G+ + Sbjct: 375 VTKFADLRNITQDDLCPKCRSQKVTIERGIEVGHIFKLGTKYTEAFGCVYTDEKGEKKLM 434 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R AA+IE HD GIIWP +VAP+++ ++ + D+ +IY L Sbjct: 435 IMGCYGIGINRTAAAIIEQMHDEDGIIWPITVAPYEVIVVPVNIKDENQHKIAFEIYENL 494 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 K G +V DD E+ G +F ADL+G P +V VG K VS+ K+EI++R T ++ ++ Sbjct: 495 QKNGIEVLIDDRDERAGVKFKDADLIGIPFRVTVGKK-VSEGKLEIRNRRTKETFEVEID 553 Query: 433 EVINYASHRFSNNR 446 + + + + Sbjct: 554 NAVEFIMNLIKQEK 567 >gi|312876378|ref|ZP_07736363.1| threonyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A] gi|311796872|gb|EFR13216.1| threonyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A] Length = 647 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 78/443 (17%), Positives = 160/443 (36%), Gaps = 33/443 (7%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L + T +G+ +P G K L + + +E+ + Sbjct: 233 EYLKKLEEAKKRDHNRIGRELEIFTT-SEVVGQGLPLLMPKGAKILQILQRFVEDEEEKR 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + +DL+ SG +D Y M + + ++ + P I+ S +S Sbjct: 292 GYLLTKTPYMAKSDLYKISGHWDHYRDGMFVIEEDENEVLALRPMTCPFQFLIYNSKQRS 351 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + + FR+E G++R R+F + DA+ P+ + + + Sbjct: 352 YRDLPIRYSETSTLFRNESSGEMHGLIRVRQFTLSDAHIICR-PDQVEEEFKGVLDLIQY 410 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I LG I D+ + F + + + + + D + Sbjct: 411 IMKTLG------------IENDIWYRFSRWDPNNKEKYIDNPEAWEKTENDMKNILDKLG 458 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y D+ + ++ + + I+ + T+ Sbjct: 459 INYKEAKGEAAFYGPKLDIQFKNVY---GKEDTIITVQIDFAL--------AERFDMTYV 507 Query: 304 GADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG+ + IG A++ + +P ++P +I +I + + Sbjct: 508 DRDGQKKRPIIIHRSSIGCYERTLAMLI---EKYNGAFPLWLSPVQIRVIPVSDN---FN 561 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + + + L + G V D E +G + A L P VIVG K ++ V ++ R Sbjct: 562 EYAKNVARILKENGFRVEEDYRSETVGYKIRDAQLQKIPYMVIVGEKEQKENTVAVRDRK 621 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 G ++E+ I + Sbjct: 622 KGDLGSFTIEDFIAMVKEKVDKK 644 >gi|296329234|ref|ZP_06871735.1| proline--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153590|gb|EFG94407.1| proline--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 567 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 121/251 (48%), Positives = 164/251 (65%), Gaps = 1/251 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEIASHKLMLR GMI + + GIY++LPLG + + + IIREE Sbjct: 1 MRFSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLASGIYAYLPLGYRTIRKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR+D G EMLRL DR+++ + PT EE++T I RS Sbjct: 61 MDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKDRHERDFVLSPTQEEMITAIIRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ KFRDE RPRFG+MR REF MKDAYSF + E + M + Sbjct: 121 DISSYKSLPINLYHIQTKFRDERRPRFGLMRGREFTMKDAYSFHTSQESLDEEFLNMRDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S ++ E + Sbjct: 181 YTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYSD-GSEYAANIEKAVSE 239 Query: 241 DIISLNSIVEQ 251 I +++ Sbjct: 240 LINPPKEELKE 250 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 74/184 (40%), Positives = 102/184 (55%), Gaps = 2/184 (1%) Query: 261 DVHNEKLFDSLP-ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 D+ ++ D+ K SARGIE G IF G KYS M+AT+ GK ++ MG YGI Sbjct: 383 DIRKVRVGDNCITGGKLHSARGIECGQIFKLGDKYSKAMNATYLDEKGKTQFMLMGCYGI 442 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G R +AA IE ++D GIIWP S+AP+ + +I ++V EKIY L + DV Sbjct: 443 GVTRTMAASIEQNNDENGIIWPVSIAPYIVDVIPANIKNEVQVSLAEKIYNELQEEKIDV 502 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 DD E+ G +F ADL+GFP +V+VG + + VE+K R TG ++S EVI Sbjct: 503 MLDDRDEKPGFKFKDADLIGFPFKVVVGKR-ADEGIVELKIRRTGETLEVSQNEVIAKIK 561 Query: 440 HRFS 443 Sbjct: 562 ELMR 565 >gi|94495624|ref|ZP_01302204.1| threonyl-tRNA synthetase [Sphingomonas sp. SKA58] gi|94425012|gb|EAT10033.1| threonyl-tRNA synthetase [Sphingomonas sp. SKA58] Length = 665 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 85/454 (18%), Positives = 153/454 (33%), Gaps = 48/454 (10%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +++ + + RD ++ L + Q + G W P G N+ A +R + Sbjct: 238 LAEHLTRLEEAGKRDHRKLGAEMDLF--HLQQEAHGSVFWHPKGYVIWRNLEAYMRRAID 295 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK-------------AMIYGPT 109 G E+ P + A W +SG + Y + M + D M P Sbjct: 296 DAGYREVKTPQVMDARQWEQSGHWGKYRENMFVIPDEVPNVEDEGPLVSDDADWMALKPM 355 Query: 110 HEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPE 168 + IFR IKSYR+LP FY+ R+E G+MR R+F DA+ F + Sbjct: 356 NCPAHVLIFRQGIKSYRDLPLRFYENGCCHRNEPHGALHGLMRVRQFTQDDAHIFCREDQ 415 Query: 169 GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFM 228 + RI+ G + P + E A+ + + Sbjct: 416 IVEE-VRAFCALADRIYKDFGFTYSI-KLALRPEKRFGTEEMWDKAE----------EEL 463 Query: 229 DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIF 288 + + + D + A YA + H L D++ +V + Sbjct: 464 RNAVAAAGLNTPDYG--WEELPGEGAFYAPKLEWH---LTDAIGRTWQVGTIQSDRVLP- 517 Query: 289 YFGTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 + A++ G DG+ H + G+ ++ + GK +W V Sbjct: 518 -------ERLDASYIGEDGERHRPVMLHRAIFGSYERFIGILIEHYAGKFPLWLAPVQAV 570 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 +++ D + RL G D E+I + L P ++VG Sbjct: 571 VATIV------SDADDYAKATVDRLRAAGIRAELDTRNEKINYKVREHSLAKVPNLLVVG 624 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 + + V ++ + +SL++VI Sbjct: 625 RREADEGTVALRELGKDGQSVLSLDDVIARLEKE 658 >gi|320352952|ref|YP_004194291.1| prolyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032] gi|320121454|gb|ADW17000.1| prolyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032] Length = 570 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 118/236 (50%), Positives = 158/236 (66%), Gaps = 1/236 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ LP +E P +AE+ SH+L++R G I + + G+Y++LP+G AL V I+R+E Sbjct: 1 MRYSQMLLPTTKETPSEAEVVSHQLLVRGGFIRKLTSGMYTYLPMGFLALQKVTEIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P +Q DLW ESGR+ YG E+LR DR+D+ GPTHEEV+TD+ R Sbjct: 61 MNRAGAQEILMPMVQPGDLWEESGRWKKYGPELLRFRDRHDRDYCLGPTHEEVVTDVARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ G+ SY M + Sbjct: 121 ELQSYRQLPINLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFDVDDAGASRSYEIMRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL+ + A+SG IGG SHEF+VLA+TGE + + + E Sbjct: 181 YHRIFERCGLEFRAVEADSGAIGGSFSHEFMVLAETGEDTLVICESCS-YAANVEK 235 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 82/184 (44%), Positives = 108/184 (58%), Gaps = 2/184 (1%) Query: 261 DVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ + D P GIEVGHIF GTKYS M A F+ +DG++ MG YG Sbjct: 382 DLRQITVNDRCPVCGGGLRLKEGIEVGHIFKLGTKYSEAMKANFQDSDGQEKPFVMGCYG 441 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG RVVAA IE +HD KGII+P +APF++ ++N+ D+ A E +Y +L G D Sbjct: 442 IGVSRVVAAAIEQNHDAKGIIFPVPLAPFQVIVLNLGPKDEGYCTAAEDLYTQLRAQGLD 501 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ GS+FA ADLLG P ++ VG F + KVEI+ R TG + +SLEE Y Sbjct: 502 VLLDDRDERPGSKFADADLLGIPYRLTVGKTFEKEGKVEIRSRKTGETQVLSLEEATAYL 561 Query: 439 SHRF 442 + R Sbjct: 562 AERV 565 >gi|295696152|ref|YP_003589390.1| prolyl-tRNA synthetase [Bacillus tusciae DSM 2912] gi|295411754|gb|ADG06246.1| prolyl-tRNA synthetase [Bacillus tusciae DSM 2912] Length = 567 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 130/266 (48%), Positives = 178/266 (66%), Gaps = 6/266 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +F+ L+E P +AE+ SH+LMLR GMI Q G+YS+LPLG + L + AI+REE Sbjct: 1 MRQSHFFVQTLREVPAEAEVPSHRLMLRAGMIRQVVSGVYSYLPLGYRVLRKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P +Q A LW ESGR+D YGKE+LR DR+ + ++ GPTHEEV+TD+ R+ Sbjct: 61 MDRAGAQEVLLPAVQPASLWQESGRWDDYGKELLRFEDRHQRMLVLGPTHEEVITDLVRT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP T YQIQ KFRDE+RPRFGVMR+REF+MKDAYSFD+ EG SY M+ + Sbjct: 121 EVRSYRQLPMTLYQIQTKFRDEVRPRFGVMRAREFIMKDAYSFDVDEEGLDRSYRAMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGD-LSHEFIVLADTGETQVFCSKDFMDFPIPSE---- 235 Y +IF R GL+ ++A+ G IGG+ SHEF+VL++ GE + D+ E Sbjct: 181 YEQIFRRCGLEFRVVQADPGAIGGEGGSHEFMVLSEVGEDTILVCPAC-DYAANVELASG 239 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSD 261 +D S E++ P A T + Sbjct: 240 KVAGEDGRRSVSEKERFLTPGAKTIE 265 Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 73/186 (39%), Positives = 103/186 (55%), Gaps = 3/186 (1%) Query: 261 DVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ + D RGIEVGH+F GTKYS +SA+F G V MG YG Sbjct: 382 DIRTARAGDRCVRCGAPLEEYRGIEVGHVFKLGTKYSEALSASFLDERGVQRPVIMGCYG 441 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R++AA +E HD KGI+WP +APF + ++ + D RDA E++ RL G + Sbjct: 442 IGVSRLIAAAVEQHHDDKGIMWPMPIAPFHVHVLPVNLKDAAQRDAAEQLCTRLEDAGIE 501 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G +F ADL+G P+Q+IVG + +S+ VE+K R TG +S +E + A Sbjct: 502 VLLDDRDERPGVKFNDADLMGIPIQLIVGKR-ISEGLVEMKRRKTGEVTLLSPDEAVRAA 560 Query: 439 SHRFSN 444 + Sbjct: 561 VEAVRS 566 >gi|229086371|ref|ZP_04218548.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-44] gi|228696983|gb|EEL49791.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-44] Length = 566 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 125/267 (46%), Positives = 169/267 (63%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LPLG K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPLGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P LQ+A+LW ESGR+ SYG E++R+ DRND+ G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPALQAAELWQESGRWYSYGSELMRMKDRNDREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYSRLYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+ L+D GE + S D+ E Sbjct: 181 YSNIFSRCGLNFRAVIADSGAMGGKDTHEFMALSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + ++ E+ A E++ Sbjct: 240 ASYTKSNEAEKALEKVATPDQKAIEEV 266 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 71/190 (37%), Positives = 105/190 (55%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ RGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTIRFARGIEVGHVFKLGTRYSEAMNATFLDENGKMKPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY+ L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREVGETIYSSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R T ++ +EE Sbjct: 498 EQGYEVLLDDRTERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATNESAEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LHTYIANILK 566 >gi|78037678|emb|CAJ25423.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 621 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 155/235 (65%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 58 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 117 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 118 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYSPTAEEAAAEFARQ 177 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT E Y+ M + Sbjct: 178 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDEDMAREYDNMRAA 237 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE + D+ E Sbjct: 238 YTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGEDSLAF-STGSDYAANVE 291 Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 1/193 (0%) Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 + P + + + + ARGIEVGH+F G++Y+ + AT Sbjct: 427 NWGRDLPEPETVADVRNVVEGERAADGGELRLARGIEVGHVFQLGSQYAQALQATVIDEG 486 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDAC 365 GK ++MG YGIG R+VAA IE +HD GIIWP +AP+++ + I D A Sbjct: 487 GKAAVMKMGCYGIGISRIVAAAIEQNHDDAGIIWPAPMAPWQVVVCVINPKQDPQVLAAA 546 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 + + +L G D DD G + G+ FA +LLG P +V+V + ++ E + R Sbjct: 547 QALLDQLLAAGLDAALDDRGLRPGAMFADMELLGIPHRVVVSERGLAAGTFEYRARTADA 606 Query: 426 REDMSLEEVINYA 438 E + + + Sbjct: 607 AESLDKAALFSRL 619 >gi|52078698|ref|YP_077489.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52784060|ref|YP_089889.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52001909|gb|AAU21851.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52346562|gb|AAU39196.1| ThrZ [Bacillus licheniformis ATCC 14580] Length = 639 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 79/445 (17%), Positives = 162/445 (36%), Gaps = 41/445 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + Q D +L L M + + G+ +LP GQ + + RE QN Sbjct: 232 LNEYLYFLEQAAKHDHRQLGKQLDLF--MFSEEAPGMPFYLPKGQIVRKELEKLSRELQN 289 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + LW +SG +D Y + M ++ ++ P + IF++++ Sbjct: 290 NASYDEVHTPFMMNYRLWEKSGHWDHYQENM-YFSEVDNTKFAIKPMNCPGHMLIFKNNL 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+LP + R E G++R R F DA+ F + K+F Sbjct: 349 YSYRDLPIRLAEYGQVHRHEFSGSLNGLLRVRTFCQDDAHIFVREDQIESE-IKKVFHLI 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +++ +G E+ V T + + S DD Sbjct: 408 DQVYRTIG------------------FEYSVELSTRPDDSLGNNHLWEVSEGSLKNVLDD 449 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + E A Y D H + D+L + + ++ F K+ T Sbjct: 450 LAIKYQVNEGDGAFYGPKIDFH---IKDALKRSHQCGTIQLD----FQMPEKFD----LT 498 Query: 302 FKGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + + + V + G++ ++ G +W + I + +I Sbjct: 499 YINHNNEKVRPVVIHRAIFGSIDRFFGILIEHFAGVFPVWLAPIQVQIIPISHI------ 552 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + C I + L + G V ++ +++G + A + P ++VG + ++ V ++ Sbjct: 553 HLEYCLGIKSELKQHGIRVQINESNQKLGYKIREAQVQKIPYTLVVGDNEIKENGVNVRK 612 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 ++++S+E + Sbjct: 613 YGEEQQKNVSIESFKKNILQQIKTR 637 >gi|237815491|ref|ZP_04594489.1| threonyl-tRNA synthetase [Brucella abortus str. 2308 A] gi|237790328|gb|EEP64538.1| threonyl-tRNA synthetase [Brucella abortus str. 2308 A] Length = 693 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 153/445 (34%), Gaps = 40/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD ++ L + G+ W G K N+ + +R + Sbjct: 268 QAYLHMLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 325 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 326 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 385 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F + + + Sbjct: 386 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLHIN 445 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G + I ++ + P S E A++ V E Sbjct: 446 -DLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVL------------EQI 492 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I+ A Y + L D++ + ++ FG Sbjct: 493 RQQSNNIKTGILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------ 543 Query: 298 MSATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G K V + G+M ++ + G +W V ++ Sbjct: 544 --AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATIT---- 597 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + ++ A+L G V D E+I + L P+ ++ G + + V Sbjct: 598 --SDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHSLQKVPVILVCGKREAEEKTV 655 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + +E M+L+E I Sbjct: 656 NMRRLGSRDQESMTLDEAIARLCEE 680 >gi|163868456|ref|YP_001609665.1| threonyl-tRNA synthetase [Bartonella tribocorum CIP 105476] gi|189083598|sp|A9IVB0|SYT_BART1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|161018112|emb|CAK01670.1| Threonyl-tRNA synthetase [Bartonella tribocorum CIP 105476] Length = 658 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 84/445 (18%), Positives = 155/445 (34%), Gaps = 39/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD ++ L + G+ W G K N+ +R + Sbjct: 233 KAYLHMLEEAEKRDHRRLGREMDLF--HFQEEGPGMIFWHQKGWKMFQNLINYMRRRLDD 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADR-----NDKAMIYGPTHEEVMTDIF 118 E++ P + LW SG + Y + M + ++ P + IF Sbjct: 291 HQYAEVNAPQVLDRSLWEISGHWGWYKENMFKAIPAAEDLDHEHIYALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + L R E G+MR R F DA+ F + + + Sbjct: 351 KHGLKSYRDLPIRLAEFGLVHRYEPSGSLHGLMRVRSFTQDDAHIFCTDEQLAAECLSIN 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L + G K I ++ + P S A++ M+ + + T Sbjct: 411 -DLILSTYADFGFKEISLKLSTRPEKRVGSDALWDHAES----------IMESVLKTIET 459 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 F I SI+ A Y + L D++ + ++ FG Sbjct: 460 KFAGQIK-TSILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQLDFNLPERFG------ 509 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + D + + G+M ++ + G +W ++ Sbjct: 510 --AFYIDKDSEKRQPVMIHRAIFGSMERFLGILIENFAGHMPLWLAPEQIVVATIT---- 563 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + +KI ARL VG D E+I + L P+ ++ G + + V Sbjct: 564 --SEANEYAQKITARLKAVGLSATTDLRNEKINYKIREHSLQKVPVILVCGKREAETNSV 621 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + + +S+E+ I S+ Sbjct: 622 NMRRLGSPNQTLLSVEDAIKQLSNE 646 >gi|325928567|ref|ZP_08189755.1| prolyl-tRNA synthetase, family II [Xanthomonas perforans 91-118] gi|325541106|gb|EGD12660.1| prolyl-tRNA synthetase, family II [Xanthomonas perforans 91-118] Length = 564 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 155/235 (65%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 1 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 61 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYSPTAEEAAAEFARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT E Y+ M + Sbjct: 121 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDEDMAREYDNMRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE + D+ E Sbjct: 181 YTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGEDSLAF-STGSDYAANVE 234 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 1/194 (0%) Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 + P + + + + ARGIEVGH+F G++Y+ + AT Sbjct: 370 NWGRDLPEPETVADVRNVVEGERAADGGELRLARGIEVGHVFQLGSQYAQALQATVIDEG 429 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDAC 365 GK ++MG YGIG R+VAA IE +HD GIIWP +AP+++ + I D A Sbjct: 430 GKAAVMKMGCYGIGISRIVAAAIEQNHDDAGIIWPAPMAPWQVVVCVINPKQDPQVLAAA 489 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 + + +L G D DD G + G+ FA +LLG P +V+V + ++ E + R Sbjct: 490 QALLDQLLAAGLDAALDDRGLRPGAMFADMELLGIPHRVVVSERGLAAGTFEYRARTADA 549 Query: 426 REDMSLEEVINYAS 439 E + + + + Sbjct: 550 AESLDKAALFSRLA 563 >gi|326317187|ref|YP_004234859.1| threonyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374023|gb|ADX46292.1| threonyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 639 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 86/444 (19%), Positives = 146/444 (32%), Gaps = 37/444 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + ++ ++E RD +L L I +HS G W P G V +R+ Sbjct: 229 EAYIKRIEEAEKRDHRRLGRELDLF--HIDEHSPGTVFWHPKGWTIWQGVEQYMRQVYRD 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW ++G +D Y + M + P + IF +K Sbjct: 287 NGYQEVKGPQILDKHLWEKTGHWDKYRENMFT-TESEKHDYALKPMNCPGHILIFNQGVK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + + R+E G+MR R F D + F + + N Sbjct: 346 SYRDLPLRYGEFGQCHRNEPTGGLHGIMRVRAFTQDDGHIFCTEDQIQQECINFT-SLLQ 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +++ G I + + P S E D + Sbjct: 405 KVYKDFGFTDIIYKVATRPEKRIGSEE-----------------SWDKAENALIESLKAS 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I A Y + L D++ + + ++ G A + Sbjct: 448 GCDYQIAVGDGAFYGPKLEY---TLRDAIGRHWQCGTIQVDPSMPERLG--------AEY 496 Query: 303 KGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DG+ H + +G++ ++ H G +W L A D C Sbjct: 497 VGEDGQRHRPIVLHRAIVGSLERFIGILIEQHAGALPVWL--APVQVAVLNITGAQDDYC 554 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 R+ K+ L G V D E+I + L P ++VG K + V ++ R Sbjct: 555 REIAAKLQKALPNQGLRVELDLRNEKITYKIREHSLQKLPYILVVGDKEKAAGAVAVRAR 614 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 M LE I+ ++ Sbjct: 615 GNRDLGVMPLEAFISLIGQDIADK 638 >gi|254706742|ref|ZP_05168570.1| threonyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|261314206|ref|ZP_05953403.1| threonyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|261303232|gb|EEY06729.1| threonyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] Length = 658 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 151/445 (33%), Gaps = 40/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD ++ L + G+ W G K N+ + +R + Sbjct: 233 QAYLHMLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D P + IF Sbjct: 291 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDCVFALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F + + Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRIN 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G + I ++ + P S E A++ V E Sbjct: 411 -DLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVL------------EQI 457 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I+ A Y + L D++ + ++ FG Sbjct: 458 RQQSNNIKTGILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------ 508 Query: 298 MSATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G K V + G+M ++ + G +W V ++ Sbjct: 509 --AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATIT---- 562 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + ++ A+L G V D E+I + L P+ ++ G + + V Sbjct: 563 --SDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHSLQKVPVILVCGKREAEEKTV 620 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + +E M+L+E I Sbjct: 621 NMRRLGSRDQESMTLDEAIARLCEE 645 >gi|212639527|ref|YP_002316047.1| prolyl-tRNA synthetase [Anoxybacillus flavithermus WK1] gi|212561007|gb|ACJ34062.1| Prolyl-tRNA synthetase [Anoxybacillus flavithermus WK1] Length = 568 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 127/281 (45%), Positives = 179/281 (63%), Gaps = 7/281 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F+P L+E P DAEI SH+L+LR G I Q++ G+YS+LPLG++ L + AIIREE Sbjct: 5 MKQSMSFIPTLREVPADAEIKSHQLLLRAGFIRQNASGVYSFLPLGKRVLQKIEAIIREE 64 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P LQ A+LW ESGR+ SYG E++RL DR+++ G THEEV+T + R Sbjct: 65 MERAGAVELLMPALQQAELWQESGRWYSYGPELMRLKDRHERDFALGATHEEVITALVRD 124 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF + E YNKM+ + Sbjct: 125 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHASHESLDEVYNKMYEA 184 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN---- 236 Y +F R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 185 YANVFRRCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDS-SDYAANIEMAPVI 243 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV 277 T ++ ++ +E+ P T + F +P+ K + Sbjct: 244 TTYERSDEPHAPLEKVHTPEQRTIE--EVSQFLQVPKEKCI 282 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 112/206 (54%), Gaps = 3/206 (1%) Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSL 296 ++ V A +DV + D P+ K RGIEVGH+F GT+YS Sbjct: 364 ANEAHYHYKGVNPDRDFVAQYADVRFIQEGDPSPDGKGTIRFARGIEVGHVFKLGTRYSE 423 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 M+AT+ +G+ + MG YGIG R +AA+ E +D G+IWP +VAPF + LI++ Sbjct: 424 AMNATYLDENGRTQPMIMGCYGIGVSRTLAAIAEQYNDEHGLIWPTAVAPFHVHLISVNP 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 R+ ++ Y +L + G +V +DD E+ G +FA +DL+G P++V VG + S+ V Sbjct: 484 KVDEQRELADEWYVQLQQEGFEVLYDDRAERPGVKFADSDLIGLPVRVTVGKR-ASEGIV 542 Query: 417 EIKHRLTGIREDMSLEEVINYASHRF 442 E+K R TG E++ + +++ Sbjct: 543 EVKVRKTGETEEVHVSQLVETLRRYL 568 >gi|162138530|ref|YP_365423.2| prolyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|114152278|sp|Q3BP90|SYP_XANC5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 564 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 155/235 (65%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 1 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 61 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYSPTAEEAAAEFARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT E Y+ M + Sbjct: 121 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDEDMAREYDNMRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE + D+ E Sbjct: 181 YTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGEDSLAF-STGSDYAANVE 234 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 1/193 (0%) Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 + P + + + + ARGIEVGH+F G++Y+ + AT Sbjct: 370 NWGRDLPEPETVADVRNVVEGERAADGGELRLARGIEVGHVFQLGSQYAQALQATVIDEG 429 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDAC 365 GK ++MG YGIG R+VAA IE +HD GIIWP +AP+++ + I D A Sbjct: 430 GKAAVMKMGCYGIGISRIVAAAIEQNHDDAGIIWPAPMAPWQVVVCVINPKQDPQVLAAA 489 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 + + +L G D DD G + G+ FA +LLG P +V+V + ++ E + R Sbjct: 490 QALLDQLLAAGLDAALDDRGLRPGAMFADMELLGIPHRVVVSERGLAAGTFEYRARTADA 549 Query: 426 REDMSLEEVINYA 438 E + + + Sbjct: 550 AESLDKAALFSRL 562 >gi|78042796|ref|YP_360595.1| prolyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901] gi|114152179|sp|Q3AB89|SYP_CARHZ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|77994911|gb|ABB13810.1| prolyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901] Length = 569 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 123/272 (45%), Positives = 177/272 (65%), Gaps = 4/272 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+P L+ENP +AE+ SHKL+LR G I + + G+Y++LPL Q+ L + IIREE Sbjct: 1 MRLSQYFMPTLRENPAEAEVISHKLLLRAGFIRKSASGVYTYLPLAQRVLKKIMQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G E+ +P LQ A+LW+E+GR+ YG E+ +L DR+++ GPTHEE++TD+ R Sbjct: 61 MDRQGGQELMLPILQPAELWLETGRWHVYGPELFKLKDRHNRDFCLGPTHEEIITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ K+RDE RPRFG+MR REF+MKD YSFD EG + SY KM+ + Sbjct: 121 EVRSYKELPLLLYQIQNKYRDEKRPRFGLMRGREFIMKDLYSFDRDEEGLEISYRKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE-TQVFCSKDFMDFPIP---SEN 236 Y +F R GLK + A++G IGG +HEF+VLA++GE V+C D + +E Sbjct: 181 YTNVFTRCGLKFRAVEADAGAIGGSTTHEFMVLANSGEAVVVYCPDDNCGYAANLEKAET 240 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 ++I + +++ P T D E L Sbjct: 241 KFTPEVIGTPAEIQKVATPNVKTVDEVAEFLK 272 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 104/197 (52%), Gaps = 2/197 (1%) Query: 250 EQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 E+ +P +D+ + + P+ V ARGIEVG IF KYS M A + +G Sbjct: 372 ERDFSPAVKYADIRLVEEGEPCPKCGKALVFARGIEVGQIFKLKDKYSRKMGAFYLDENG 431 Query: 308 KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + + MG YGIG R +AA +E +HD GIIWP ++APF++ ++ + D+ E+ Sbjct: 432 QQKPIIMGCYGIGVTRTMAAAVEQNHDEDGIIWPAAIAPFEVIVVPVSNKDEQQMKMAEE 491 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +Y L G +V DD E+ G +F ADL+G PL++ VG + VS+ E+K R T + Sbjct: 492 VYNLLLNAGFEVVIDDRDERPGVKFKDADLIGIPLRITVGKRTVSEGVYEVKIRRTREEK 551 Query: 428 DMSLEEVINYASHRFSN 444 EE+++ Sbjct: 552 VFQKEELVDGLRQLLKT 568 >gi|54310060|ref|YP_131080.1| prolyl-tRNA synthetase [Photobacterium profundum SS9] gi|81828683|sp|Q6LN48|SYP_PHOPR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|46914499|emb|CAG21278.1| putative prolyl-tRNA synthetase [Photobacterium profundum SS9] Length = 571 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 115/237 (48%), Positives = 154/237 (64%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVEILMPVVQPFELWEETGRSEKMGPELLRFTDRHSRPFVLSPTAEEVVTSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY M + Sbjct: 121 EISSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFSMMDAYSFDIDKEGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + S D D+ E Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAFSSD-SDYAANIEKA 236 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 63/190 (33%), Positives = 105/190 (55%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFD--SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A D+ N D + RGIEVGHIF GT YS M+ G DGK ++M Sbjct: 382 AQVEDLRNVVEGDLSPCGQGTIQLKRGIEVGHIFQLGTNYSKKMNCNVLGPDGKSATLEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG R+VA+ IE ++D GIIWP ++APF+++++ + + + A E +YA L+ Sbjct: 442 GCYGIGVSRIVASAIEQNNDENGIIWPTALAPFQVAIVPMNMAKSEEVKAAAESLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G +V +DD E+ G F +L+G P +++G++ + + ++E K R G + + + + Sbjct: 502 AAGIEVLFDDRKERPGVMFKDIELIGIPHTIVIGNRSLENGEMEYKDRRDGNKVAVPVAD 561 Query: 434 VINYASHRFS 443 V+ + + Sbjct: 562 VVEMIKQKLA 571 >gi|90413553|ref|ZP_01221544.1| prolyl-tRNA synthetase [Photobacterium profundum 3TCK] gi|90325485|gb|EAS41968.1| prolyl-tRNA synthetase [Photobacterium profundum 3TCK] Length = 571 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 113/237 (47%), Positives = 152/237 (64%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVEILMPVVQPFELWEETGRSEKMGPELLRFTDRHSRPFVLSPTAEEVVTSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY M + Sbjct: 121 EISSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFSMMDAYSFDIDKEGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAF-SSESDYAANIEKA 236 Score = 174 bits (441), Expect = 3e-41, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 107/206 (51%), Gaps = 3/206 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFD--SLPENKRVSARGIEVGHIFYFGTKYSLPM 298 D I A D+ N D + RGIEVGHIF GT YS M Sbjct: 366 DDKHYFGINWGRDVELAQVEDLRNVVEGDLSPCGQGTIQLKRGIEVGHIFQLGTNYSEKM 425 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 + G DGK ++MG YGIG RVVA+ IE ++D GIIWP ++APF+++++ + Sbjct: 426 NCNVLGPDGKSVTLEMGCYGIGVSRVVASAIEQNYDENGIIWPTALAPFQVAIVPMNMAK 485 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + + A E +YA L+ G +V +DD E+ G F +L+G P +++G++ + + ++E Sbjct: 486 SEEVKAAAESLYAELTAAGIEVLFDDRKERPGVMFKDIELIGIPHTIVIGNRSLENGEME 545 Query: 418 IKHRLTGIREDMSLEEVINYASHRFS 443 K R G + + + +V+ + + Sbjct: 546 YKDRRDGNKVAVPVTDVVEMIKQKLA 571 >gi|148261186|ref|YP_001235313.1| threonyl-tRNA synthetase [Acidiphilium cryptum JF-5] gi|166223313|sp|A5G0L2|SYT_ACICJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|146402867|gb|ABQ31394.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Acidiphilium cryptum JF-5] Length = 640 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 82/437 (18%), Positives = 147/437 (33%), Gaps = 39/437 (8%) Query: 8 LPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E R D ++ L + + + G W G + V A +R Q G Sbjct: 233 LKQLEEAERRDHRKIGRQMDLF--HMQEEAVGSVFWHEKGWRLYRTVEAYMRRRQEEFGY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 IE+ P L LW SG +D+Y M + DK + P + IF ++SY Sbjct: 291 IEVRTPQLLDRKLWEASGHWDNYRSHMFIAEVEDEDKVLAVKPMNCPCHVQIFNHGLRSY 350 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R E G+MR R F DA+ F + + + + R+ Sbjct: 351 RELPLRMAEFGACHRYEPSGALHGIMRVRAFAQDDAHIFCTEDQIADETV-RFVEMLRRV 409 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++ P S E D + + + Sbjct: 410 YADFGFPEFAVKFADRPTPRSGSDE-----------------VWDKAEAALRSACETAGV 452 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ A Y + L D++ + + ++ F + Sbjct: 453 EFTVNPGEGAFYGPKLEF---VLRDAIGRDWQCGTLQVD----FVLPERLDASY---VTA 502 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 G+ V + +G+ ++ + G+ +W S++ D Sbjct: 503 ESGRARPVMLHRAIVGSFERFIGILIENCAGRFPLWLAPTQAAVASIVT------DANDY 556 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E + ARL + G V D E+I ++ L P ++VG + V I+ + Sbjct: 557 AETVAARLKEAGLAVATDTRNEKINAKVRDLSLALVPNILVVGRREAEQQTVSIRRLGSD 616 Query: 425 IREDMSLEEVINYASHR 441 ++ M+L+E I Sbjct: 617 KQDSMTLDEAIATLKAE 633 >gi|298291991|ref|YP_003693930.1| threonyl-tRNA synthetase [Starkeya novella DSM 506] gi|296928502|gb|ADH89311.1| threonyl-tRNA synthetase [Starkeya novella DSM 506] Length = 666 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 83/434 (19%), Positives = 146/434 (33%), Gaps = 39/434 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + RD ++ L + G+ W P G N+ A +R Sbjct: 247 YILQLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHPKGWNLFQNLVAYMRRRL-AAD 303 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-----MIYGPTHEEVMTDIFRS 120 E++ P + LW SG + Y M ++ D P + IF+ Sbjct: 304 YSEVNAPQVLDKSLWETSGHWGWYKDNMFKVQPAGDAEDNDRVYALKPMNCPGHVQIFKH 363 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R E G+MR R F DA+ F + + Sbjct: 364 GLKSYRDLPMRLAEFGAVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLKIN-E 422 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L + G + I ++ + P S E A+ +V I +E+ Sbjct: 423 LILSTYADFGFEEIVVKLSTRPEKRVGSDEVWDHAEDVMERVLTQ-------IEAESGGK 475 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L A Y + L D++ + ++ FG Sbjct: 476 IKTGIL----PGEGAFYGPKFEY---TLRDAIGREWQCGTTQVDFNLPERFG-------- 520 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + ADG+ + G+M ++ H G +W V ++ + Sbjct: 521 AFYVDADGQKKTPVMIHRAICGSMERFTGILIEHHAGHFPLWLAPVQAVVATITSDGD-- 578 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 E+I A K+G V D E+I + + P ++VG K ++ V I Sbjct: 579 ----PYAEEIAAAARKMGLRVELDLRNEKINYKVREHSVAKVPALIVVGRKEAAERTVSI 634 Query: 419 KHRLTGIREDMSLE 432 + + + ++L+ Sbjct: 635 RRLGSQNQTTLTLD 648 >gi|283851379|ref|ZP_06368661.1| threonyl-tRNA synthetase [Desulfovibrio sp. FW1012B] gi|283573329|gb|EFC21307.1| threonyl-tRNA synthetase [Desulfovibrio sp. FW1012B] Length = 647 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 77/435 (17%), Positives = 152/435 (34%), Gaps = 40/435 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 Y + + RD +L L + + G+ W P G+ + R E Sbjct: 228 LKTYLKHLEEAKKRDHRKLGTQLDLFS-FSEEVGAGMPIWHPKGELVRTILEDFERREHL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G + P + +LW SG YD+Y + M + ++++ P + I++S I Sbjct: 287 KRGYSLVRGPLILRRELWERSGHYDNYRENM-YFTEIDEQSYGIKPMNCLAHMLIYKSRI 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP ++++ + R E G++R R+F DA+ + + + Sbjct: 346 RSYRDLPQRYFELGVVHRHEKSGVLHGLLRVRQFTQDDAHILCRPDQLLEE-ITGVIKFV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + G + + P + E + + + Sbjct: 405 QDVVGLFGFDYE-VELSTRPEKSIGADE-----------------DWERATKALTDALES 446 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + I E A Y D+ KL D+L + + + F ++ Sbjct: 447 LGLPYDINEGDGAFYGPKIDI---KLKDALERRWQCATVQCD----FTLPDRFD----LV 495 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + ADG+ + +GA+ V+ G W V + + Sbjct: 496 YTDADGERKRPVMLHRVILGAVERFLGVLIEHTAGALPTWLAPVQARILIVT------DA 549 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ++ E+ ARL + G DD E++G + A + P ++ G K + ++ Sbjct: 550 QKEFAEQALARLLEAGIRAELDDRNEKLGFKVREAQVEKIPYMLVAGDKEKELGGLNVRL 609 Query: 421 RLTGIREDMSLEEVI 435 R +L+EV+ Sbjct: 610 RSGDNLGVKTLDEVV 624 >gi|120611523|ref|YP_971201.1| threonyl-tRNA synthetase [Acidovorax citrulli AAC00-1] gi|166223312|sp|A1TR39|SYT_ACIAC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|120589987|gb|ABM33427.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Acidovorax citrulli AAC00-1] Length = 639 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 86/439 (19%), Positives = 142/439 (32%), Gaps = 36/439 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 I + RD +L L I +HS G W P G V +R+ G E Sbjct: 234 RIEEAEKRDHRRLGRELDLF--HIDEHSPGTVFWHPKGWTIWQGVEQYMRQVYRDNGYQE 291 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 + P + LW ++G +D Y + M + P + IF +KSYR+L Sbjct: 292 VKGPQILDKHLWEKTGHWDKYRENMFT-TESEKHDYALKPMNCPGHILIFNQGVKSYRDL 350 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P + + R+E G+MR R F D + F + + N +++ Sbjct: 351 PLRYGEFGQCHRNEPTGGLHGIMRVRAFTQDDGHIFCTEDQIQQECINFT-ALLQKVYKD 409 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 G I + + P S E D + Sbjct: 410 FGFTDIIYKVATRPEKRIGSEE-----------------SWDKAENALIESLKASGCDYQ 452 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 I A Y + L D++ + + ++ G A + G DG Sbjct: 453 IAVGDGAFYGPKLEY---TLRDAIGRHWQCGTIQVDPSMPERLG--------AEYVGEDG 501 Query: 308 KDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + H + +G++ ++ H G +W L A D CR+ Sbjct: 502 QRHRPIVLHRAIVGSLERFIGILIEQHAGALPVWL--APVQVAVLNITGAQDDYCREIAA 559 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+ L G V D E+I + L P ++VG K + V ++ R Sbjct: 560 KLQKALPNQGLRVELDLRNEKITYKIREHSLQKLPYILVVGDKEKAAGAVAVRARGNRDL 619 Query: 427 EDMSLEEVINYASHRFSNN 445 M LE I+ ++ Sbjct: 620 GVMPLEAFISLIGQDIADK 638 >gi|73956414|ref|XP_546694.2| PREDICTED: similar to prolyl-tRNA synthetase (mitochondrial)(putative) [Canis familiaris] Length = 632 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 152/457 (33%), Positives = 229/457 (50%), Gaps = 46/457 (10%) Query: 3 RSKYFLPI-LQENPR--------DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNV 53 S+ F P L+E+ D S +LM + G+I+ S G Y LP +A++ + Sbjct: 199 LSRMFQPQNLREDQVLSLEGRSDDLTCKSQRLMQQVGLIYPASPGCYHLLPYTVRAMEKL 258 Query: 54 NAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEV 113 +I +E G ++++P+L A+LW + R+D GKE+LRL DR+ K GPTHEE Sbjct: 259 QRVIDQEMQAIGGQKVNMPSLSPAELWRATNRWDLMGKELLRLRDRHGKEYCLGPTHEEA 318 Query: 114 MT-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKH 172 +T + SYR LPF YQ+ KFRDE RPRFG++R REF MKD Y+FD +PE ++ Sbjct: 319 VTALVASQKTLSYRQLPFLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSPEAARQ 378 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 +Y + +Y +F RLGL+ I ++A+ G IGG SHEF + AD GE + Sbjct: 379 TYGLVCGAYSSLFRRLGLRCIRVQADVGSIGGTASHEFQLPADIGEDRFAVCPSC----- 433 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 A + + ++ ARGIEVGH FY GT Sbjct: 434 ---------------------GFSANMETLRLSQTDCPACQSPLTEARGIEVGHTFYLGT 472 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 KYS +A F A G+ +MG YG+G R++AA IE I WP +AP+++ LI Sbjct: 473 KYSSIFNAQFTDAQGRPCPAEMGCYGLGVTRILAAAIEVLSTEDCIRWPGLLAPYQVCLI 532 Query: 353 NIKA--HDQVCRDACEKIYARLSKV-----GCDVFWDDMGEQ-IGSQFAVADLLGFPLQV 404 K ++V + +Y +++ G +V DD + IG++ A+ G+P + Sbjct: 533 PPKKGSKEEVATELTGHLYDLITEAVPQLRG-EVLLDDRTHRTIGNRLKDANKFGYPFVI 591 Query: 405 IVGSKFVSDSK-VEIKHRLTGIREDMSLEEVINYASH 440 I G + + D E+ + TG ++ E V + S Sbjct: 592 IAGKRALEDPAHFEVWSQNTGEVVFLTREGVTEFLSQ 628 >gi|254701818|ref|ZP_05163646.1| threonyl-tRNA synthetase [Brucella suis bv. 5 str. 513] Length = 658 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 81/445 (18%), Positives = 151/445 (33%), Gaps = 40/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD ++ L + G+ W G K + + +R + Sbjct: 233 QAYLHMLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHAKGWKMFQKLVSYMRRRLDS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 291 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F + + Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRIN 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G + I ++ + P S E A++ V E Sbjct: 411 -DLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVL------------EQI 457 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I+ A Y + L D++ + ++ FG Sbjct: 458 RQQSNNIKTGILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------ 508 Query: 298 MSATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G K V + G+M ++ + G +W V ++ Sbjct: 509 --AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATIT---- 562 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + ++ A+L G V D E+I + L P+ ++ G + + V Sbjct: 563 --SDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHSLQKVPVILVCGKREAEEKTV 620 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + +E M+L+E I Sbjct: 621 NMRRLGSRDQESMTLDEAIARLCEE 645 >gi|229586468|ref|YP_002844969.1| threonyl-tRNA synthetase [Rickettsia africae ESF-5] gi|259516664|sp|C3PMR6|SYT_RICAE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|228021518|gb|ACP53226.1| Threonyl-tRNA synthetase [Rickettsia africae ESF-5] Length = 635 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 73/438 (16%), Positives = 154/438 (35%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + RD +L L + ++G+ W G + + IR++ + G Sbjct: 231 YLLMLEEAEKRDHRKLGRELDLF--HFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L LW SG ++ + +M + +DK + P + IF+ IKSY Sbjct: 289 YTEVKTPVLVDKSLWEASGHWEKFRDDMF-ALETDDKTLALKPMNCPCHVQIFKQGIKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + L R+E G+MR R + DA+ F + + + + + Sbjct: 348 RDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAAEQITDETVSF-CKLLTEV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P S+E D + + Sbjct: 407 YKDFGFTDIKVKFSDRPEIRAGSNE-----------------VWDKAENALKEAVEQAGF 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ A Y + L D++ + ++ F + + A++ Sbjct: 450 NYTLNPGEGAFYGPKLEF---VLTDAIGRQWQCGTLQMD----FVLPER----LDASYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 A G+ + +G++ ++ + G+ +W + I D Sbjct: 499 ASGEKKRPVMLHRAILGSLERFIGILIEEYAGRFPLW------LAPVQVAIATITSDLND 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L G ++ ++I + P+ ++G + + +V I+ T Sbjct: 553 YALEVQKALIDNGIRTDFNISPDKINYKIREFSNQKIPMIAVIGKQEQENKQVAIRRLGT 612 Query: 424 GIREDMSLEEVINYASHR 441 +E +S+E++I Sbjct: 613 TDQEVLSVEQLIAVVKEE 630 >gi|161829880|ref|YP_001596051.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 331] gi|189083495|sp|A9N9Z2|SYP_COXBR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|161761747|gb|ABX77389.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 331] Length = 564 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 130/237 (54%), Positives = 169/237 (71%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++FL ++E P DA +ASH+LM+R GM+ + + G+Y+WLPLG + L V ++REE Sbjct: 1 MKVSQFFLATVKETPADAVLASHQLMIRAGMLRKLASGLYTWLPLGLRVLQKVADVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A LW ESGR+++YG E+LR+ DR+ +GPTHEEV+TDI R Sbjct: 61 MNRAGALELLMPIVQPASLWQESGRWEAYGAELLRIMDRHQNGFCFGPTHEEVITDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSFDL +G + +Y KMF + Sbjct: 121 ELKSYKQLPLNFYQIQTKFRDEIRPRFGVMRSREFLMKDAYSFDLDEKGMQAAYEKMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF RLGL + A++G IGGD SHEF VLAD GE V S D+ E Sbjct: 181 YRRIFTRLGLNFRAVLADTGAIGGDYSHEFQVLADVGEDTVVYSD-ESDYAANIEKA 236 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 82/203 (40%), Positives = 112/203 (55%), Gaps = 4/203 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLP 297 DD +N E+ P + +D+ D P+ K ARGIEVG +F G KYS Sbjct: 363 DDFHWINVNWER-DVPLGSVADIRKVVEGDISPDGKGRLRFARGIEVGQVFQLGDKYSRK 421 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 M+AT GK Y+QMG YGIG R VAA IE +HD +GIIWP +APF I+L+ + H Sbjct: 422 MNATVVDELGKSRYLQMGCYGIGVSRTVAAAIEQNHDERGIIWPMPMAPFFIALVPVNMH 481 Query: 358 DQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 R+ACEK+Y L G +V WDD E+ G FA DL+G P ++++ + V Sbjct: 482 KSYRVREACEKLYNELIDAGYEVLWDDRKERPGVMFADMDLIGIPHRLVISESGLDRGIV 541 Query: 417 EIKHRLTGIREDMSLEEVINYAS 439 E K R + E++SLE V++ Sbjct: 542 EYKARKSKEAENVSLENVLSVFR 564 >gi|241763800|ref|ZP_04761846.1| prolyl-tRNA synthetase [Acidovorax delafieldii 2AN] gi|241366932|gb|EER61337.1| prolyl-tRNA synthetase [Acidovorax delafieldii 2AN] Length = 580 Score = 237 bits (605), Expect = 3e-60, Method: Composition-based stats. Identities = 118/237 (49%), Positives = 159/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ SHKLM R G+I + GIY+++P+G + + V AI+REE Sbjct: 1 MKASQFFISTLKEAPADAEVVSHKLMTRAGLIKKLGAGIYNYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+++P +Q A+LW E+GR++ G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 61 MNRAGAVELTMPVVQPAELWQETGRFEKMGPELLRIQDRHGRDFVVQPTSEEVITDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE RPRFG+MR REF+MKDAYSFD +K SY M + Sbjct: 121 ELKSYKQLPKNFYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDQAAAKASYQVMAAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R GL + A+SG IGGDLS EF V+A TGE + D+ E Sbjct: 181 YRRIFDRFGLTYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYCPQ-SDYAANMEKA 236 Score = 169 bits (428), Expect = 8e-40, Method: Composition-based stats. Identities = 74/184 (40%), Positives = 106/184 (57%), Gaps = 3/184 (1%) Query: 259 TSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P + RGIEVGH+FY GTKYS M+ATF G DGK + +MG Sbjct: 392 VADLRNVVAGDRSPDGRGELAIERGIEVGHVFYLGTKYSKGMNATFLGDDGKPAFFEMGC 451 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKV 375 YGIG R+ AA IE +HD +GIIWPD++APF + + + + A EK+YA L Sbjct: 452 YGIGVTRLPAAAIEQNHDERGIIWPDAIAPFTVVICPVGMDRSDAVKAAAEKLYADLLAA 511 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD GE+ G+ FA +L+G P +V +G K + + VE +HR +++ +++ Sbjct: 512 GVDVILDDRGERPGAMFADWELIGVPHRVTIGDKSLKEGVVEYQHRRDAAATKVAVADIL 571 Query: 436 NYAS 439 Sbjct: 572 ARVK 575 >gi|317060327|ref|ZP_07924812.1| prolyl-tRNA synthetase [Fusobacterium sp. D12] gi|313686003|gb|EFS22838.1| prolyl-tRNA synthetase [Fusobacterium sp. D12] Length = 569 Score = 237 bits (605), Expect = 3e-60, Method: Composition-based stats. Identities = 117/231 (50%), Positives = 158/231 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEI SH+L+LR GMI + + G+Y++LPLG + L V IIREE Sbjct: 1 MRFSKAYIKTLKETPKEAEIISHQLLLRAGMIKKLASGLYTYLPLGFRTLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ +P LQ A+LW ESGR++ G+EM+RL DR+ + + GPT+EEV+TDI R+ Sbjct: 61 MDRAGSQELLMPVLQPAELWRESGRWNVMGEEMVRLKDRHQRDFVLGPTNEEVITDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ K RDE RPRFG+MRSREF+MKDAYSF + E + M + Sbjct: 121 DISSYKSLPINLYHIQTKVRDERRPRFGLMRSREFIMKDAYSFHTSQESLDEEFENMKNT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S Sbjct: 181 YTRIFERCGLKFRPVEADSGAIGGSGSQEFHVLAESGEDEIIYSDGCSYAA 231 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 70/183 (38%), Positives = 101/183 (55%), Gaps = 3/183 (1%) Query: 261 DVHNEKLFDSLPE--NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ K + P+ K SARGIE GHIF G KYS + A++ G+ + MG YG Sbjct: 384 DIRLVKAGEDCPKSNGKLHSARGIECGHIFKLGDKYSKALGASYLDEKGESKIMLMGCYG 443 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R +AA IE ++D GIIWP ++AP+ + +I + E+IY L+K D Sbjct: 444 IGVGRTMAAAIEQNYDENGIIWPTALAPYLVDVIPANIKNTEQMKLAEEIYENLNKEHLD 503 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 DD E+ G +F ADL+GFP ++I G K +++ VE+K R TG ++S +EVI Sbjct: 504 AMIDDRDERPGFKFKDADLIGFPFKIICGKK-AAENIVELKIRKTGETLEVSADEVIPTI 562 Query: 439 SHR 441 Sbjct: 563 KEL 565 >gi|319649026|ref|ZP_08003235.1| ThrZ protein [Bacillus sp. BT1B_CT2] gi|317389020|gb|EFV69838.1| ThrZ protein [Bacillus sp. BT1B_CT2] Length = 639 Score = 237 bits (605), Expect = 3e-60, Method: Composition-based stats. Identities = 79/445 (17%), Positives = 163/445 (36%), Gaps = 41/445 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + Q D +L L M + + G+ +LP GQ + + RE QN Sbjct: 232 LNEYLYFLEQAAKHDHRQLGKQLDLF--MFSEEAPGMPFYLPKGQIVRKELEKLSRELQN 289 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + LW +SG +D Y + M ++ ++ P + IF++++ Sbjct: 290 NASYDEVHTPFMMNYRLWEKSGHWDHYQENM-YFSEVDNTKFAIKPMNCPGHMLIFKNNL 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+LP + R E G++R R F DA+ F + K+F Sbjct: 349 YSYRDLPIRLAEYGQVHRHEFSGSLNGLLRVRTFCQDDAHIFVREDQIESE-IKKVFHLI 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +++ +G E+ V T + + S DD Sbjct: 408 DQVYRTIG------------------FEYSVELSTRPDDSLGNNHLWEVSEGSLKNVLDD 449 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + E A Y D H + D+L + + ++ F K+ T Sbjct: 450 LAIKYQVNEGDGAFYGPKIDFH---IKDALKRSHQCGTIQLD----FQMPEKFD----LT 498 Query: 302 FKGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + + + V + G++ ++ G +W + I + +I Sbjct: 499 YINHNNEKVRPVVIHRAIFGSIDRFFGILIEHFAGAFPVWLAPIQVQIIPISHI------ 552 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + C I + L ++G V ++ +++G + A + P ++VG + ++ V ++ Sbjct: 553 HLEYCLGIKSELKQLGIRVQINESNQKLGYKIREAQVQKIPYTLVVGDNEIKENGVNVRK 612 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 ++++S+E + Sbjct: 613 YGEEQQKNVSIESFKKNILQQIKTR 637 >gi|289662612|ref|ZP_06484193.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289668443|ref|ZP_06489518.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 564 Score = 237 bits (605), Expect = 3e-60, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 155/235 (65%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 1 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 61 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYSPTAEEAAAEFARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT E Y+ M + Sbjct: 121 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDEDMAREYDNMRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE + D+ E Sbjct: 181 YTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGEDSLAF-STASDYAANVE 234 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 1/193 (0%) Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 + P + + + + ARGIEVGH+F G++Y+ + AT Sbjct: 370 NWGRDLPEPETVADVRNVVEGERAADGGELRLARGIEVGHVFQLGSQYAQALQATVIDEG 429 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDAC 365 GK ++MG YGIG R+VAA IE +HD GIIWP +AP+++ + I D A Sbjct: 430 GKAAVMKMGCYGIGISRIVAAAIEQNHDEAGIIWPAPMAPWQVVVCVINPKQDANVVAAA 489 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 + + L G D DD G + G+ FA +LLG P +V+V + ++ E + R Sbjct: 490 QALLDELIAAGLDAALDDRGLRPGAMFADMELLGIPHRVVVSERGLAAGTFEYRARTADA 549 Query: 426 REDMSLEEVINYA 438 E++ + + Sbjct: 550 AENLDRAGLFSRL 562 >gi|264676905|ref|YP_003276811.1| prolyl-tRNA synthetase [Comamonas testosteroni CNB-2] gi|262207417|gb|ACY31515.1| prolyl-tRNA synthetase [Comamonas testosteroni CNB-2] Length = 580 Score = 237 bits (605), Expect = 3e-60, Method: Composition-based stats. Identities = 118/237 (49%), Positives = 160/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++ + L+E P DAE+ SHKLM+R GMI + GIY+++P+G + + V AI+REE Sbjct: 1 MKASQFLISTLKEAPADAEVVSHKLMMRAGMIKKLGAGIYNYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE ++P +Q A+LW E+GR++ G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 61 MNRAGAIETTMPVVQPAELWQETGRFEKMGPELLRIQDRHGRDFVIQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 KSY+ LP YQIQ KFRDE RPRFG+MR REF+MKDAYSFD + ++ SY M + Sbjct: 121 EFKSYKQLPKNLYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDKDRDAAQISYQTMREA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R GL+ +RA+SG IGGDLS EF V+A TGE + + D+ E Sbjct: 181 YKRIFDRFGLQYRAVRADSGAIGGDLSEEFQVIASTGEDAIVYCPN-SDYAANIEKA 236 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 69/189 (36%), Positives = 106/189 (56%), Gaps = 3/189 (1%) Query: 257 AATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A +D+ N D P+ + RGIE+GH+FY GTKYS M ATF G +GK + +M Sbjct: 390 AVVADLRNVVAGDRSPDGAGELAIERGIEIGHVFYLGTKYSKAMEATFLGDNGKPQHFEM 449 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLS 373 G YGIG R+ AA +E +HD +G+IWPD++APF + + I + + EK+Y L Sbjct: 450 GCYGIGVTRLPAAAVEQNHDERGMIWPDAIAPFTVVICPIGMGRSEAVKTEAEKLYGELL 509 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G DV DD E+ G+ A +L+G P +V++G + + + VE + R ++ E Sbjct: 510 ALGVDVILDDRDERPGAMLADWELIGVPHRVVLGDRGLKEGVVEYQQRRDTEATKLATNE 569 Query: 434 VINYASHRF 442 V+ + R Sbjct: 570 VLAHLKSRL 578 >gi|261752375|ref|ZP_05996084.1| threonyl-tRNA synthetase [Brucella suis bv. 5 str. 513] gi|261742128|gb|EEY30054.1| threonyl-tRNA synthetase [Brucella suis bv. 5 str. 513] Length = 660 Score = 237 bits (605), Expect = 3e-60, Method: Composition-based stats. Identities = 81/445 (18%), Positives = 151/445 (33%), Gaps = 40/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD ++ L + G+ W G K + + +R + Sbjct: 235 QAYLHMLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHAKGWKMFQKLVSYMRRRLDS 292 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 293 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 352 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F + + Sbjct: 353 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRIN 412 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G + I ++ + P S E A++ V E Sbjct: 413 -DLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVL------------EQI 459 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I+ A Y + L D++ + ++ FG Sbjct: 460 RQQSNNIKTGILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------ 510 Query: 298 MSATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G K V + G+M ++ + G +W V ++ Sbjct: 511 --AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATIT---- 564 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + ++ A+L G V D E+I + L P+ ++ G + + V Sbjct: 565 --SDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHSLQKVPVILVCGKREAEEKTV 622 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + +E M+L+E I Sbjct: 623 NMRRLGSRDQESMTLDEAIARLCEE 647 >gi|312794079|ref|YP_004027002.1| threonyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181219|gb|ADQ41389.1| threonyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 647 Score = 237 bits (605), Expect = 3e-60, Method: Composition-based stats. Identities = 78/443 (17%), Positives = 160/443 (36%), Gaps = 33/443 (7%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L + T +G+ +P G K L + + +E+ + Sbjct: 233 EYLKKLEEAKKRDHNRIGRELEIFTT-SEVVGQGLPLLMPKGAKILQILQRFVEDEEEKR 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + +DL+ SG +D Y M + + ++ + P I+ S +S Sbjct: 292 GYLLTKTPYMAKSDLYKISGHWDHYRDGMFVIEEDENEVLALRPMTCPFQFLIYNSKQRS 351 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + + FR+E G++R R+F + DA+ P+ + + + Sbjct: 352 YRDLPIRYSETSTLFRNESSGEMHGLIRVRQFTLSDAHIICR-PDQVEEEFKGVLDLIQY 410 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I LG I D+ + F + + + + + D + Sbjct: 411 IMKTLG------------IENDIWYRFSRWDPNNKEKYIDNPEAWEKTENDMKNILDKLG 458 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y D+ + ++ + + I+ + T+ Sbjct: 459 INYKEAKGEAAFYGPKLDIQFKNVY---GKEDTIITVQIDFAL--------AERFDMTYV 507 Query: 304 GADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG+ + IG A++ + +P ++P +I +I + + Sbjct: 508 DRDGQKKRPIIIHRSSIGCYERTLAMLI---EKYNGAFPLWLSPVQIRVIPVSDN---FN 561 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + + + L + G V D E +G + A L P VIVG K ++ V ++ R Sbjct: 562 EYAKNVARILKENGFRVEEDYRSETVGYKIRDAQLQKIPYMVIVGEKEQKENTVAVRDRK 621 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 G ++E+ I + Sbjct: 622 KGDLGSFTIEDFIAMVKEKVDKK 644 >gi|255019923|ref|ZP_05291997.1| Threonyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756] gi|254970582|gb|EET28070.1| Threonyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756] Length = 454 Score = 237 bits (605), Expect = 3e-60, Method: Composition-based stats. Identities = 74/447 (16%), Positives = 148/447 (33%), Gaps = 40/447 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y + + RD L L + I + G+ W P G + + R+ R Sbjct: 41 YLAQMAEAERRDHRRIGRDLDLFS--IQEDAGGGLVFWHPQGAQIRKVIEDYWRQAHLRG 98 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + LW SG D Y M + + + P + I+++ ++S Sbjct: 99 GYELLYTPHIAHEKLWFTSGHKDFYADSMFQPMEDEGEPYQLKPMNCPFHILIYKNTLRS 158 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + ++ +R E+ G+MR R F DA+ F P+ + + Sbjct: 159 YRDLPIRWAELGTVYRHEMSGALHGLMRVRGFTQDDAHIFCR-PDQIEAEIAGVLALTQN 217 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I G + + + P S E + + Sbjct: 218 ILGTFGFQRYEVHLSTRPEHSVGSDE-----------------IWETATRALEGALARAG 260 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y D+ K+ D++ + S ++ F ++++ + Sbjct: 261 LEYRVDAGGGAFYGPKIDL---KIEDAIGRKWQCSTIQLD----FNLPQRFAM----EYV 309 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG + G++ ++ ++GK +W + + + Sbjct: 310 DEDGSRRTPIMVHRAIFGSIERFFGILIEHYEGKFPLWLAPTQVVVLPI------SEHQA 363 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D + + + L G V D E+IG + L P +VG + + +V ++ R Sbjct: 364 DYAQMVQSTLGAAGLRVESDLRNEKIGYKIRAHTLRRVPFLAVVGEREKAAGEVALRSRD 423 Query: 423 TGIREDMSLEEVINYASHRFSNNRPVL 449 + L +V + + L Sbjct: 424 GVDLGSLKLADVAANLKAMDESRQNAL 450 >gi|220928798|ref|YP_002505707.1| threonyl-tRNA synthetase [Clostridium cellulolyticum H10] gi|219999126|gb|ACL75727.1| threonyl-tRNA synthetase [Clostridium cellulolyticum H10] Length = 645 Score = 237 bits (605), Expect = 3e-60, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 160/445 (35%), Gaps = 35/445 (7%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L T + + +G+ +P G + + + + +E+ R Sbjct: 230 EYVTKLEEAKKRDHNKLGRELELFTT-VEEIGQGLPLLMPKGARIVQTLQRFVEDEEERR 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA--MIYGPTHEEVMTDIFRSHI 122 G + P + +DL+ SG + Y M L D M P I+ + + Sbjct: 289 GYVLTKTPLMAKSDLYKLSGHWQHYKDGMFLLGDEEKDEEVMALRPMTCPFQFMIYNTKL 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+LP + + FR+E G++R R+F + + + TPE + + + Sbjct: 349 HSYRDLPIRYGETSTLFRNEASGEMHGLIRVRQFTISEGH-LVCTPEQLEDEFKGVVDLI 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + LG I D+++ F + + +++ + T D Sbjct: 408 KFMMETLG------------IQDDVTYRFSKWDPKNKEKYIGNEEDWENVQDQMRTILDH 455 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ + + + + ++ + ++ Sbjct: 456 LKIDYKEAEGEAAFYGPKLDIQCKNVH---GKEDTIITVQVDFAL--------AERLNMV 504 Query: 302 FKGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + + + H + IG A++ + +P + P + ++ + Sbjct: 505 YVDKNNEKKHPYIIHRTSIGCYERTLAILI---EKYAGAFPTWLCPVQAKILPLVDKHH- 560 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ L G V D E+IG + A + P +++G K + ++ V ++ Sbjct: 561 --DFAQKVAQMLRDKGVKVEVDTRNEKIGYKIREAQMEKIPYMLVIGDKEMENNAVSVRS 618 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R G M E+ ++ Sbjct: 619 RKDGDLGAMPAEQFVDRIVEEIRTR 643 >gi|145634860|ref|ZP_01790568.1| prolyl-tRNA synthetase [Haemophilus influenzae PittAA] gi|145268026|gb|EDK08022.1| prolyl-tRNA synthetase [Haemophilus influenzae PittAA] Length = 572 Score = 237 bits (605), Expect = 3e-60, Method: Composition-based stats. Identities = 146/428 (34%), Positives = 204/428 (47%), Gaps = 39/428 (9%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V ++REE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y IF+RLGL ++A++G IGG SHEF VLA +GE V DF E Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDFAANIELAEAI 239 Query: 236 -------------NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 D + ++ +VEQ+ P T K D + RG Sbjct: 240 AIGERQAPTAEMCLVDTPNAKTIAELVEQFNLPIEKTVKTLIVKGADENQPLVALIIRGD 299 Query: 283 EVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 + + F + G +GA+ + I + Sbjct: 300 HELNEIKAQKHPLVADPLEFADETEIKAKIGAGVGSLGAVNLNIPAIIDRTVALMSDFSC 359 Query: 343 SVAPFKISLINIKAHDQVCRDACEKIYA------------RLS-KVGCDV--FWDDMGEQ 387 N+ V + L K G +V + Q Sbjct: 360 GANIDGKHYFNVNWERDVAMPEVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIF-----Q 414 Query: 388 IGSQFAVA 395 +G +++ A Sbjct: 415 LGKKYSEA 422 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 110/208 (52%), Gaps = 4/208 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D ++ + D+ N D P+ K RGIEVGHIF G KYS M Sbjct: 364 DGKHYFNVNWERDVAMPEVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGKKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 AT +G DGK + MG YGIG RVVA+ IE HD + I D +APF ++++ + Sbjct: 424 KATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQHHDERGIIWPSDEIAPFTVAIVPMNMH 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + E++Y L G DV +DD E+ G FA +L+G P V++G K + + ++ Sbjct: 484 KSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLDNGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSN 444 E K+R +G +E +S +++++ + + N Sbjct: 544 EYKNRRSGEKEMISKDKLLSVLNEKLGN 571 >gi|145632080|ref|ZP_01787815.1| frataxin-like protein [Haemophilus influenzae 3655] gi|144986987|gb|EDJ93517.1| frataxin-like protein [Haemophilus influenzae 3655] Length = 572 Score = 237 bits (605), Expect = 3e-60, Method: Composition-based stats. Identities = 146/428 (34%), Positives = 204/428 (47%), Gaps = 39/428 (9%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V ++REE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y IF+RLGL ++A++G IGG SHEF VLA +GE V DF E Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDFAANIELAEAI 239 Query: 236 -------------NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 D + ++ +VEQ+ P T K D + RG Sbjct: 240 AIGERQAPTAEMCLVDTPNAKTIAELVEQFNLPIEKTVKTLIVKGADENQPLVALIIRGD 299 Query: 283 EVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 + + F + G +GA+ + I + Sbjct: 300 HELNEIKAQKHPLVADPLEFADETEIKAKIGAGVGSLGAVNLNIPAIIDRTVALMSDFSC 359 Query: 343 SVAPFKISLINIKAHDQVCRDACEKIYA------------RLS-KVGCDV--FWDDMGEQ 387 N+ V + L K G +V + Q Sbjct: 360 GANIDGKHYFNVNWERDVAMPEVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIF-----Q 414 Query: 388 IGSQFAVA 395 +G +++ A Sbjct: 415 LGKKYSEA 422 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 110/208 (52%), Gaps = 4/208 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D ++ + D+ N D P+ K RGIEVGHIF G KYS M Sbjct: 364 DGKHYFNVNWERDVAMPEVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGKKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 AT +G DGK + MG YGIG RVVA+ IE HD + I D +APF ++++ + Sbjct: 424 KATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQHHDDRGIIWPSDEIAPFTVAIVPMNMH 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + E++Y L G DV +DD E+ G FA +L+G P V++G K + + ++ Sbjct: 484 KSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMFADMELIGIPHMVVIGEKNLDNGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSN 444 E K+R TG +E +S +++++ + + N Sbjct: 544 EYKNRRTGEKEMISKDKLLSVLNEKLGN 571 >gi|90961470|ref|YP_535386.1| threonyl-tRNA synthetase [Lactobacillus salivarius UCC118] gi|122993083|sp|Q1WUN2|SYT_LACS1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|90820664|gb|ABD99303.1| Threonyl-tRNA synthetase [Lactobacillus salivarius UCC118] Length = 649 Score = 237 bits (605), Expect = 3e-60, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 151/443 (34%), Gaps = 37/443 (8%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 L +E RD + ++L L + + G+ W+P G + I +++ G Sbjct: 235 LQRQKEARERDHRVIGNELDLF--FVDPKVGAGLPYWMPNGATIRRVIERYIIDKEVAWG 292 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKS 124 + P L + +L+ +SG +D Y ++M D D M P + ++ H +S Sbjct: 293 FQHVYTPVLANLNLYKQSGHWDHYREDMFPPMDMGDGEMLELRPMNCPSHIQVYNHHKRS 352 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR LP ++ + R E + + + + P+ + + + Sbjct: 353 YRELPLRIAELGMMHRYEKSGALTGLSRVREMTLNDGHDFIEPDHIEDEIKTLIKLMTEV 412 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS-ENTDFDDII 243 ++ + R D T+ + D M S DD+ Sbjct: 413 YNDFDITDYRFRLS--------------YRDPKNTEKYFDDDEMWEKSQSKLKAAMDDMG 458 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 E A Y DV + +L + +S ++ F ++ + Sbjct: 459 LEYFEAEGEAAFYGPKIDVQTKT---ALGGEETLSTIQLD----FLLPERFD----LKYI 507 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 GADG++H + + M A + + G W + I + + Sbjct: 508 GADGEEHRPVMVHRGIVSTMERFTAYLTEMYKGAFPTWLAPHQ-----VDIIPVKNDLHM 562 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D + ++L G V DD E++G + A + P +++G + VS+ V ++ Sbjct: 563 DYVNDLSSKLRAHGIRVTVDDRNEKMGYKIRQAQVNKIPYTLVIGDEEVSNGTVTVRKYG 622 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 M+ E N N Sbjct: 623 EEKTNTMTKAEFKNLLFEDIENY 645 >gi|22325483|ref|NP_671778.1| EMB2761 (EMBRYO DEFECTIVE 2761); ATP binding / aminoacyl-tRNA ligase/ ligase, forming aminoacyl-tRNA and related compounds / nucleotide binding / threonine-tRNA ligase [Arabidopsis thaliana] gi|330250779|gb|AEC05873.1| putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] Length = 650 Score = 237 bits (605), Expect = 3e-60, Method: Composition-based stats. Identities = 79/444 (17%), Positives = 153/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L +E R D L L + I + G+ W P G + + ++ Sbjct: 241 KAYLHFKEEAKRRDHRRIGQDLDLFS--IQDEAGGGLVFWHPKGAIVRNIIEESWKKMHV 298 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P + ADLW SG D Y + M + D+ P + +++ Sbjct: 299 EHGYDLIYTPHVAKADLWKISGHLDFYRENMYDQMEIEDELYQLRPMNCPYHILLYQRKR 358 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP ++ +R EL G+ R R F DA+ F L + + Sbjct: 359 QSYRDLPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDE-IRGVLDLT 417 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I R G + + P D + + DD Sbjct: 418 EEILSRFGFNKYEVNLSTRPEKS-----------------VGGDDIWEKATCALRDALDD 460 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ K+ D+L + S ++ F ++ + T Sbjct: 461 KGWSYEVDEGGGAFYGPKIDL---KIEDALGRKWQCSTIQVD----FNLPQRFDITYVDT 513 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + + +G++ V+ + +P ++P ++ ++ + + Sbjct: 514 NSDK---KRPIMIHRAVLGSLERFFGVLI---EHYAGDFPLWLSPVQVRVLPVTDN---Q 564 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + C+++ +L G GE++ A+ PL +VG K V V ++ R Sbjct: 565 LEFCKEVSKKLRACGVRAEL-CHGERLPKLIRNAETQKIPLMAVVGPKEVETGTVTVRSR 623 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 G + ++++IN + Sbjct: 624 FGGELGTIPVDDLINKINIAVETR 647 >gi|29653442|ref|NP_819134.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 493] gi|81839111|sp|Q83F67|SYP_COXBU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|29540704|gb|AAO89648.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 493] Length = 566 Score = 237 bits (605), Expect = 3e-60, Method: Composition-based stats. Identities = 130/237 (54%), Positives = 169/237 (71%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++FL ++E P DA +ASH+LM+R GM+ + + G+Y+WLPLG + L V ++REE Sbjct: 3 MKVSQFFLATVKETPADAVLASHQLMIRAGMLRKLASGLYTWLPLGLRVLQKVADVVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A LW ESGR+++YG E+LR+ DR+ +GPTHEEV+TDI R Sbjct: 63 MNRAGALELLMPIVQPASLWQESGRWEAYGAELLRIMDRHQNGFCFGPTHEEVITDIARQ 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSFDL +G + +Y KMF + Sbjct: 123 ELKSYKQLPLNFYQIQTKFRDEIRPRFGVMRSREFLMKDAYSFDLDEKGMQAAYEKMFDA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF RLGL + A++G IGGD SHEF VLAD GE V S D+ E Sbjct: 183 YRRIFTRLGLNFRAVLADTGAIGGDYSHEFQVLADVGEDTVVYSD-ESDYAANIEKA 238 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 82/203 (40%), Positives = 112/203 (55%), Gaps = 4/203 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLP 297 DD +N E+ P + +D+ D P+ K ARGIEVG +F G KYS Sbjct: 365 DDFHWINVNWER-DVPLGSVADIRKVVEGDISPDGKGRLRFARGIEVGQVFQLGDKYSRK 423 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 M+AT GK Y+QMG YGIG R VAA IE +HD +GIIWP +APF I+L+ + H Sbjct: 424 MNATVVDELGKSRYLQMGCYGIGVSRTVAAAIEQNHDERGIIWPMPMAPFFIALVPVNMH 483 Query: 358 DQV-CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 R+ACEK+Y L G +V WDD E+ G FA DL+G P ++++ + V Sbjct: 484 KSYRVREACEKLYNELIDAGYEVLWDDRKERPGVMFADMDLIGIPHRLVISESGLDRGIV 543 Query: 417 EIKHRLTGIREDMSLEEVINYAS 439 E K R + E++SLE V++ Sbjct: 544 EYKARKSKEAENVSLENVLSVFR 566 >gi|62320472|dbj|BAD94986.1| putative protein [Arabidopsis thaliana] Length = 426 Score = 237 bits (605), Expect = 3e-60, Method: Composition-based stats. Identities = 79/444 (17%), Positives = 153/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L +E R D L L + I + G+ W P G + + ++ Sbjct: 17 KAYLHFKEEAKRRDHRRIGQDLDLFS--IQDEAGGGLVFWHPKGAIVRNIIEESWKKMHV 74 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P + ADLW SG D Y + M + D+ P + +++ Sbjct: 75 EHGYDLIYTPHVAKADLWKISGHLDFYRENMYDQMEIEDELYQLRPMNCPYHILLYQRKR 134 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP ++ +R EL G+ R R F DA+ F L + + Sbjct: 135 QSYRDLPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDE-IRGVLDLT 193 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I R G + + P D + + DD Sbjct: 194 EEILSRFGFNKYEVNLSTRPEKS-----------------VGGDDIWEKATCALRDALDD 236 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ K+ D+L + S ++ F ++ + T Sbjct: 237 RGWSYEVDEGGGAFYGPKIDL---KIEDALGRKWQCSTIQVD----FNLPQRFDITYVDT 289 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + + +G++ V+ + +P ++P ++ ++ + + Sbjct: 290 NSDK---KRPIMIHRAVLGSLERFFGVLI---EHYAGDFPLWLSPVQVRVLPVTDN---Q 340 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + C+++ +L G GE++ A+ PL +VG K V V ++ R Sbjct: 341 LEFCKEVSKKLRACGVRAEL-CHGERLPKLIRNAETQKIPLMAVVGPKEVETGTVTVRSR 399 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 G + ++++IN + Sbjct: 400 FGGELGTIPVDDLINKINIAVETR 423 >gi|332558829|ref|ZP_08413151.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides WS8N] gi|332276541|gb|EGJ21856.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides WS8N] Length = 646 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 151/443 (34%), Gaps = 45/443 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD ++ L + + + G+ W P G + + +R + Sbjct: 234 KAYLHMLEEAAKRDHRKLGREMELF--HLQEEAPGMVFWHPNGWQIYRTLEDYMRGRLRQ 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-----MIYGPTHEEVMTDIF 118 G E+ P + LW SG +++Y + M + + A P + ++ Sbjct: 292 AGYKEIRTPQVVDRKLWEASGHWEAYKENMFIVEVEEEHAKEKRINALKPMNCPCHVQVY 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F+ DA+ F T + + Sbjct: 352 NQGLKSYRDLPLRLAEFGSCHRYESSGSMHGLMRVRGFVQDDAHIFC-TEDQIESECAAF 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 ++ LG S ++ + P S E +T + Sbjct: 411 IELLSSVYKDLGFDSFEIKLSTRPEVRIGSDEAWDKVET-----------------ALEN 453 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + + I A Y D KL D++ + ++ G Sbjct: 454 AIKKVGAAYEIDPGEGAFYGPKLDF---KLTDAIGRKWQCGTFQVDPNLPTRLG------ 504 Query: 298 MSATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G DG H + +G+ ++ ++ GK W S++ Sbjct: 505 --AEYIGEDGAKHRPYMLHRAILGSFERFIGILIENYAGKLPFWLAPRQVVVASIV---- 558 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 ++ A L G D E+I + + P+ + +G + V V Sbjct: 559 --SDADPYVAEVVAALRARGVRAEADTRNEKINYKVREHSVGKVPVILAIGMQEVEARSV 616 Query: 417 EIKHRLTGIREDMSLEEVINYAS 439 ++ E M L++V++ + Sbjct: 617 SVRRLGETRTESMGLDQVVDQLA 639 >gi|53712976|ref|YP_098968.1| threonyl-tRNA synthetase [Bacteroides fragilis YCH46] gi|60681188|ref|YP_211332.1| threonyl-tRNA synthetase [Bacteroides fragilis NCTC 9343] gi|253563046|ref|ZP_04840503.1| threonyl-tRNA synthetase [Bacteroides sp. 3_2_5] gi|265763073|ref|ZP_06091641.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_16] gi|73919767|sp|Q5LEQ6|SYT_BACFN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|73919768|sp|Q64VP2|SYT_BACFR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|52215841|dbj|BAD48434.1| threonyl-tRNA synthetase [Bacteroides fragilis YCH46] gi|60492622|emb|CAH07394.1| putative threonyl-tRNA synthetase [Bacteroides fragilis NCTC 9343] gi|251946822|gb|EES87104.1| threonyl-tRNA synthetase [Bacteroides sp. 3_2_5] gi|263255681|gb|EEZ27027.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_16] gi|301162677|emb|CBW22224.1| putative threonyl-tRNA synthetase [Bacteroides fragilis 638R] Length = 646 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 80/445 (17%), Positives = 148/445 (33%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD ++ L KG+ WLP G + +R Q R Sbjct: 230 EYLALMEEAKKRDHRKIGKEMQLFM-FSDTVGKGLPMWLPKGTALRLRLQDFLRRIQTRY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + L+V SG Y YGK+ + + P + +I+++ Sbjct: 289 DYQEVITPPIGNKLLYVTSGHYAKYGKDAFQPIHTPEEGEEYFLKPMNCPHHCEIYKNFP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F + + ++ Sbjct: 349 RSYKDLPLRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKGE-FLRVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + D I L D + + D + + Sbjct: 408 SIVFR--------------SMDFDNFEAQISLRDKVNREKYIGSDENWEKAEQAIIEACE 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + +E A Y D + D++ ++ ++ Sbjct: 454 EKGLKAKIEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFEL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G+D + H + G+M AV+ GK +W + I + Sbjct: 503 EYMGSDNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LTPEQVVILPISE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ L DD E+IG + ++ P +IVG K + +V ++ Sbjct: 557 KFNEYAEKVKTYLKMKEIRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVSVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M EE + N Sbjct: 617 RQGEGDKGTMKFEEFGEILNEEVQN 641 >gi|222640294|gb|EEE68426.1| hypothetical protein OsJ_26793 [Oryza sativa Japonica Group] Length = 701 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 78/446 (17%), Positives = 159/446 (35%), Gaps = 38/446 (8%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R +Y + + RD + L HQ S G +LP G + + +R++ Sbjct: 293 RLKEYKHLLEEAKKRDHRLLGQTQDLF--FFHQLSPGSCFFLPHGAIIYNKLMDFLRQQY 350 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G E+ P + + LW SG +Y + M + + + P + +F Sbjct: 351 RDRGYQEVLSPNIYNMQLWETSGHAANYKENMF-VFEIEKQEFGLKPMNCPGHCLMFEHR 409 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP + R+EL G+ R R F DA+ F K + Sbjct: 410 VRSYRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCR-ESQIKDEVKAVLDF 468 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++ G K + + P E + + Sbjct: 469 INYVYEIFGFKYE-LELSTRPEKYLGDIE-----------------TWNKAEQQLTEALN 510 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I E A Y D+ +FD+L + + ++ F ++ L SA Sbjct: 511 EFGKPWQINEGDGAFYGPKIDIG---VFDALKRKFQCATLQLD----FQLPLRFKLTYSA 563 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + V + +G++ + A++ + WP ++P + + +I ++ Sbjct: 564 E--DEAKLERPVMIHRAILGSVERMFAILL---EHYNGKWPLWLSPRQAIVCSISSNS-- 616 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + +++ AR+ + G V D+ I + A L F ++VG++ +V ++ Sbjct: 617 -VEYAKQVRARIHEAGFHVAIDETDRTIQKKVREAQLAQFNYILVVGAQEAETGQVSVRV 675 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R +S++++I + + Sbjct: 676 RDKAELATVSIDDIITRFKEEVAAYK 701 >gi|109005002|ref|XP_001114166.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like [Macaca mulatta] Length = 475 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 147/458 (32%), Positives = 229/458 (50%), Gaps = 48/458 (10%) Query: 3 RSKYFLPI-LQENP--------RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNV 53 S+ F P L+E+ D S +LML+ G+I+ S G Y LP +A++ + Sbjct: 42 LSRVFQPQNLREDQVLSLQDKFGDLTCKSQRLMLQVGLIYPASPGCYHLLPYTVRAMEKL 101 Query: 54 NAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEV 113 +I +E G ++++PTL A+LW + R+D GKE+LRL DR+ K GPTHEE Sbjct: 102 VRVIDQEMQAIGGQKVNMPTLSPAELWQATNRWDLMGKELLRLRDRHGKEYCLGPTHEEA 161 Query: 114 MT-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKH 172 +T I SY+ LPF YQ+ KFRDE RPRFG++R REF MKD Y+FD +PE ++ Sbjct: 162 ITALIAAQKKLSYKQLPFLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSPEAAQQ 221 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 +YN + +Y +F+RLGL+ + ++A+ G IGG +SHEF + D GE ++ Sbjct: 222 TYNLVCDAYCSLFNRLGLRFVKVQADVGSIGGTMSHEFQLPVDVGEDRLAICPHC----- 276 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + A + ++ ++ +GIEVGH FY GT Sbjct: 277 ---------------------SFSANLETLDLSQMNCPACQSPLTETKGIEVGHTFYLGT 315 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 KYS +A F GK +MG YG+G R++AA IE + WP +AP++ LI Sbjct: 316 KYSSIFNAQFTNIYGKPSLAEMGCYGLGVTRILAAAIEVLSTEDCVRWPSLLAPYQACLI 375 Query: 353 NIKAHDQVCRDACEKIYARLSKV--------GCDVFWDDMGE-QIGSQFAVADLLGFPLQ 403 K + +A ++ +L +V DD IG++ A+ G+P Sbjct: 376 PPKKGSKE--EAASELIGQLCDHITEAVPQLHGEVLLDDRTHLTIGNRLKDANKFGYPFV 433 Query: 404 VIVGSKFVSDSK-VEIKHRLTGIREDMSLEEVINYASH 440 +I G + + D E+ + TG ++ + V++ + Sbjct: 434 IIAGKRALEDPAHFEVWCQNTGEVVFLTKDGVMDLLTQ 471 >gi|297835784|ref|XP_002885774.1| hypothetical protein ARALYDRAFT_319286 [Arabidopsis lyrata subsp. lyrata] gi|297331614|gb|EFH62033.1| hypothetical protein ARALYDRAFT_319286 [Arabidopsis lyrata subsp. lyrata] Length = 650 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 79/444 (17%), Positives = 152/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L +E R D L L + I + G+ W P G + + ++ Sbjct: 241 KAYLHFKEEAKRRDHRRIGQDLDLFS--IQDEAGGGLVFWHPKGAIVRNIIEESWKKMHV 298 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P + ADLW SG D Y + M + D+ P + +++ Sbjct: 299 EHGYDLIYTPHVAKADLWKISGHLDFYRENMYDQMEIEDELYQLRPMNCPYHILLYQRKR 358 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP ++ +R EL G+ R R F DA+ F L + + Sbjct: 359 QSYRDLPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDE-IRGVLDLT 417 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I R G + + P D + + DD Sbjct: 418 EEILSRFGFNKYEVNLSTRPEKS-----------------VGDDDIWEKATCALRDALDD 460 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ K+ D+L + S ++ F ++ + T Sbjct: 461 KGWSYEVDEGGGAFYGPKIDL---KIEDALGRKWQCSTIQVD----FNLPQRFDITYVDT 513 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + + +G++ V+ + +P ++P ++ ++ + + Sbjct: 514 NSDK---KRPIMIHRAVLGSLERFFGVLI---EHYAGDFPLWLSPIQVRVLPVTDN---Q 564 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + C+++ +L G GE++ A+ PL +VG K V V ++ R Sbjct: 565 LEFCKEVSKKLRACGVRAEL-CHGERLPKLIRNAETQKIPLMAVVGPKEVETGTVTVRSR 623 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 G + +++ IN + Sbjct: 624 FGGELGTIPVDDFINKINIAVETR 647 >gi|319944615|ref|ZP_08018883.1| proline--tRNA ligase [Lautropia mirabilis ATCC 51599] gi|319742152|gb|EFV94571.1| proline--tRNA ligase [Lautropia mirabilis ATCC 51599] Length = 589 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 121/235 (51%), Positives = 159/235 (67%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ + LP +E P DAE+ SHKLM R GMI + + GIY+++PLG + + + AIIREE Sbjct: 1 MKATALHLPTFKEAPADAEVVSHKLMTRAGMIRKLAGGIYTYMPLGLRVIRRIEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE+ +P +Q A+LW+ESGR++ YG E+LR+ DR+ + + PT EEV+TD+ R Sbjct: 61 MDAAGAIELLMPVIQPAELWMESGRWEEYGPELLRIRDRHQRDFVIQPTSEEVVTDLARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP FY IQ KFRDE RPRFGVMR REF MKDAYSFD E + SY KMF + Sbjct: 121 DLRSYRQLPKNFYHIQTKFRDERRPRFGVMRGREFTMKDAYSFDRDSESALVSYRKMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL+ + A++G IGG SHEF V+ADTGE + D+ E Sbjct: 181 YHRIFDRLGLQYRAVAADTGSIGGSASHEFQVIADTGEDALVY-STGSDYAANIE 234 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 107/201 (53%), Gaps = 3/201 (1%) Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATF 302 L + + +D+ N + D P+ + RGIEVGH+FY GTKYS M+ATF Sbjct: 386 LPEPLPEGQVGEVMIADIRNVQAGDPSPDGQGTLAIQRGIEVGHVFYLGTKYSQAMNATF 445 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVC 361 +G+ ++MG YGIG R++ A IE +HD KGIIWP S+APF++ + + + Sbjct: 446 IDENGQSKPLEMGCYGIGVTRLLGAAIEQNHDDKGIIWPASIAPFEVVVCPMGLERSEAV 505 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 R+A +++ A L G DD E+ G FA +L+G PL++ VG + + + +E+ R Sbjct: 506 REAVDRLAADLQAAGIRYVVDDRNERPGVMFADWELIGVPLRITVGDRGLKEGLLELTVR 565 Query: 422 LTGIREDMSLEEVINYASHRF 442 + ++ +V+ Sbjct: 566 RGMVTHKVAPADVLAEVQKLL 586 >gi|15603235|ref|NP_246309.1| prolyl-tRNA synthetase [Pasteurella multocida subsp. multocida str. Pm70] gi|81856712|sp|Q9CL72|SYP_PASMU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|12721741|gb|AAK03454.1| ProS [Pasteurella multocida subsp. multocida str. Pm70] Length = 571 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 119/252 (47%), Positives = 163/252 (64%), Gaps = 1/252 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P +A I SH+LMLR GMI + G+Y+WLP G + L+ V IIREE Sbjct: 1 MRTSQYLFSTLKETPAEASIVSHQLMLRAGMIRPLASGLYTWLPTGLRVLNKVEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +++GA+E+ + Q A+LW ESGR++ YG E+LR DR ++ + GPT+EEV+TD+ R Sbjct: 61 MDKSGALEVKMAVTQPAELWQESGRWEEYGPELLRFKDRGERDFVIGPTNEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP Y IQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ + Sbjct: 121 ELSSYKQLPLNLYHIQTKFRDEVRPRFGVMRSREFVMKDAYSFHTTHECLQKTYDVMYET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF+RLGL ++A++G IGG SHEF VLA +GE V DF E + Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVF-STESDFAANIELAEAV 239 Query: 241 DIISLNSIVEQW 252 + + E+ Sbjct: 240 ALGERGAATEEL 251 Score = 180 bits (456), Expect = 5e-43, Method: Composition-based stats. Identities = 73/193 (37%), Positives = 118/193 (61%), Gaps = 3/193 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N D P+ K V RGIEVGHIF GTKYS M+AT +G DG+ + Sbjct: 379 PVPHIADLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSAAMNATVQGEDGRPQTM 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYAR 371 MG YGIG RV+AA IE HD +GIIWPD++APFK++++ + + + E++Y Sbjct: 439 IMGCYGIGVTRVIAAAIEQHHDERGIIWPDNIAPFKVAIVPMNMHKSESVQQFAEELYRT 498 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+ G +V +DD E+ G FA +L+G P +++G K + ++E K+R +G +E ++ Sbjct: 499 LTAQGVEVIFDDRKERPGVMFADMELIGVPHMIVIGEKNLEKGEIEYKYRRSGEKEMIAK 558 Query: 432 EEVINYASHRFSN 444 +++++ +F++ Sbjct: 559 DQLLDVLKAKFAS 571 >gi|58039289|ref|YP_191253.1| threonyl-tRNA synthetase [Gluconobacter oxydans 621H] gi|73919795|sp|Q5FSP9|SYT_GLUOX RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|58001703|gb|AAW60597.1| Threonyl-tRNA synthetase [Gluconobacter oxydans 621H] Length = 645 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 79/438 (18%), Positives = 147/438 (33%), Gaps = 40/438 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L + + RD ++ L I + + G W G + + +R Q R Sbjct: 233 LLRLEEAEKRDHRRIGREMDLF--HIQEEAVGQIFWHRKGWRLYTVLQDYMRRAQERNNY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L LW SG +D Y + M + DK + P + IFR ++SY Sbjct: 291 EEVRTPQLVDRALWEASGHWDKYRENMFIATVEDEDKTLALKPMNCPCHVQIFRHGLRSY 350 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R E G+MR R F DA+ F + + + K + Sbjct: 351 RELPLRMAEFGACHRYEPSGALHGIMRVRGFTQDDAHIFCTDDQIADET-AKFVKMLAEV 409 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + LG + ++ P S E D S + Sbjct: 410 YSDLGFDTFRVKFSDRPETRAGSDE-----------------VWDRAEGSLKKACEIAGV 452 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D++ + + ++ + A++ G Sbjct: 453 EYEYNPGEGAFYGPKLEF---VLTDAIGRDWQCGTLQVDYVLP--------ERLDASYIG 501 Query: 305 AD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + V + +G+ ++ + GK +W S++ D Sbjct: 502 EDSNRHRPVMLHRAILGSFERFIGILIEQYAGKFPLWLAPTQVVVASIV------SDAAD 555 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ A L G V D ++I ++ L P+ ++VG + + KV ++ Sbjct: 556 YANEVAATLKAAGLQVETDTRSDKINAKIREHSLARVPVILVVGRREAEERKVAMRRLGG 615 Query: 424 GIREDMSLEEVINYASHR 441 +E +SL++ + + Sbjct: 616 AAQEILSLDDAVAALAKE 633 >gi|256846083|ref|ZP_05551541.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2] gi|256719642|gb|EEU33197.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2] Length = 567 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 120/251 (47%), Positives = 164/251 (65%), Gaps = 1/251 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEIASHKLMLR GMI + + GIY++LPLG + + + I+REE Sbjct: 1 MRFSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLASGIYAYLPLGYRTIKKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR+D G EMLRL DR+++ + PT EE++T I RS Sbjct: 61 MDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKDRHERDFVLSPTQEEMITAIVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ KFRDE RPRFG+MR REF MKDAYSF + E + M + Sbjct: 121 DISSYKSLPINLYHIQTKFRDERRPRFGLMRGREFTMKDAYSFHTSQESLDEEFLNMRDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S ++ E + Sbjct: 181 YSRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYSD-GSEYAANIEKAVSE 239 Query: 241 DIISLNSIVEQ 251 I +++ Sbjct: 240 LINPPKEELKE 250 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 72/184 (39%), Positives = 101/184 (54%), Gaps = 2/184 (1%) Query: 261 DVHNEKLFDSLP-ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 D+ K+ ++ K SARGIE G IF G KYS M+AT+ +GK Y+ MG YGI Sbjct: 383 DIRTAKVGENCITGGKLYSARGIECGQIFKLGDKYSKAMNATYLDENGKTQYMLMGCYGI 442 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G R +AA IE ++D GIIWP S+AP+ + +I ++V EKIY L + D Sbjct: 443 GVTRTMAAAIEQNNDENGIIWPVSIAPYTVDVIPANIKNEVQVSLAEKIYNELEEEKIDT 502 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 DD E+ G +F ADL+GFP +V+VG + + VE+K R TG ++ E+I Sbjct: 503 MLDDRDEKPGFKFKDADLIGFPFKVVVGKR-ADEGIVELKIRRTGETLELPQNEIIAKIK 561 Query: 440 HRFS 443 Sbjct: 562 ELMK 565 >gi|212703017|ref|ZP_03311145.1| hypothetical protein DESPIG_01055 [Desulfovibrio piger ATCC 29098] gi|212673605|gb|EEB34088.1| hypothetical protein DESPIG_01055 [Desulfovibrio piger ATCC 29098] Length = 576 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 121/237 (51%), Positives = 165/237 (69%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S ++P L+E+P +AE+ SHKL+LR GM+ + + G+Y +LPLG KAL+NV ++REE Sbjct: 1 MRFSSTYIPTLKESPSEAEVVSHKLLLRAGMVRKLTSGVYIYLPLGLKALENVQRVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P + DLW E+GR++ YGKE+LR DRND+ GPTHEEV+TD+ R Sbjct: 61 MDAAGFSELLMPMVIPGDLWKETGRWEYYGKELLRFKDRNDRDYCLGPTHEEVITDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD + G+ SY M+ + Sbjct: 121 EVRSYRQLPVRLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFDSSDAGADESYKLMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF RLGL+ + A++G IGG+ SHEF+VLADTGE + + + E Sbjct: 181 YCRIFKRLGLRFRAVEADTGSIGGNFSHEFMVLADTGEDTIAACTECS-YAANVERA 236 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 72/181 (39%), Positives = 104/181 (57%), Gaps = 2/181 (1%) Query: 260 SDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ L D P +GIEVGHIF GTKYS M A + +GK++ + MG Y Sbjct: 380 ADLRCITLSDPCPRCGGAIELPKGIEVGHIFKLGTKYSDAMHAVYLDENGKENVMIMGCY 439 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG RVVA+ IE +HD GII+P +VAP + L+N+ + R E+IYA L K G Sbjct: 440 GIGISRVVASAIEQNHDEHGIIFPPTVAPVECILLNLDPGKEEVRAKAEEIYAMLCKAGV 499 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 V DD E+ G +F ADL+G P+Q+++G K +S +E K R TG + ++ ++ + Sbjct: 500 TVLLDDREERPGVKFKDADLIGAPMQLVLGGKGLSRGVLECKDRRTGEKGELPVDALETA 559 Query: 438 A 438 Sbjct: 560 L 560 >gi|160902301|ref|YP_001567882.1| threonyl-tRNA synthetase [Petrotoga mobilis SJ95] gi|189083616|sp|A9BHF0|SYT_PETMO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|160359945|gb|ABX31559.1| threonyl-tRNA synthetase [Petrotoga mobilis SJ95] Length = 640 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 157/442 (35%), Gaps = 41/442 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +L +++E R D KL L M+ + + G+ +LP G+ L+ + A R+ + Sbjct: 231 YLNMIEEAKRRDHRKLGPKLNLF--MLQSEMAPGMPFFLPNGKIVLNELMAYSRQVHKKY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G +E+ P + + LW +SG +D Y + M ++ D M P + I++++ S Sbjct: 289 GYVEVETPQIMNIKLWHQSGHWDHYKENMF-FTEKEDMPMAVKPMNCPGHILIYKNNFVS 347 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP ++ R E G+ R R F DA+ F + + + + + Sbjct: 348 YRDLPIRMFEFGKVHRYERSGVLHGLFRVRAFTQDDAHIFCMPSQMEEEIIKVIQL---- 403 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + I ++ + T + + + + Sbjct: 404 ---------------TNEIFSTFGFKYEAILSTMPEDHMGDIESWERATDALKKALEKSN 448 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E A Y D + DSL + + ++ F Y+ A Sbjct: 449 MEYRIDEGEGAFYGPKIDF---NVTDSLGRKWQCTTIQLDFQMPERFDMVYADENDA--- 502 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + G++ ++ + G+ W ++I + + Sbjct: 503 ----QKRPVMIHRAIFGSLERFFGILIENFAGEFPTW------LSPVQVSILPVSEKFNE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +K L + G V+ +D +G + + P ++ G K ++ + I+ R Sbjct: 553 EAKKFSRILEQEGIRVYVNDSDATVGYKIRNEQMKKVPYMIVFGEKEMNSDTINIRTRKG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 E++S E I + N Sbjct: 613 DTIENVSKERFIEEIKNEIKNR 634 >gi|322515550|ref|ZP_08068532.1| proline--tRNA ligase [Actinobacillus ureae ATCC 25976] gi|322118393|gb|EFX90656.1| proline--tRNA ligase [Actinobacillus ureae ATCC 25976] Length = 571 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 122/243 (50%), Positives = 158/243 (65%), Gaps = 1/243 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR++ YG E+LR DR + + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWQESGRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHVEKASLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V DF E + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDFAANIELAEAV 239 Query: 241 DII 243 + Sbjct: 240 AVG 242 Score = 176 bits (445), Expect = 9e-42, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 110/207 (53%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPM 298 D ++ + A +D+ N D P+ K V RGIEVGHIF GTKYS M Sbjct: 364 DGKHYFNVNWERDAAMPEVADLRNVVEGDPSPDGKGVLQIKRGIEVGHIFQLGTKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 AT +G DGK + MG YGIG RVVAA IE HD + I D +APF ++++ + Sbjct: 424 KATVQGEDGKPLVMTMGCYGIGVTRVVAAAIEQHHDDRGIIWPSDEIAPFTVAIVPMNMH 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + E++Y L G DV +DD E+ G FA +L+G P V++G K + + ++ Sbjct: 484 KSESVQQFSEELYRSLKAQGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLVNGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K+R TG + ++ ++++ + Sbjct: 544 EYKNRRTGEKSMITKDQLLAFLKENVK 570 >gi|221639813|ref|YP_002526075.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides KD131] gi|254783534|sp|B9KKC7|SYT_RHOSK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|221160594|gb|ACM01574.1| Threonyl-tRNA synthetase [Rhodobacter sphaeroides KD131] Length = 646 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 151/443 (34%), Gaps = 45/443 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD ++ L + + + G+ W P G + + +R + Sbjct: 234 KAYLHMLEEAAKRDHRKLGREMELF--HLQEEAPGMVFWHPNGWQIYRTLEDYMRGRLRQ 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-----MIYGPTHEEVMTDIF 118 G E+ P + LW SG +++Y + M + + A P + ++ Sbjct: 292 AGYKEIRTPQVVDRKLWEASGHWEAYKENMFIVEVEEEHAKEKRINALKPMNCPCHVQVY 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F+ DA+ F T + + Sbjct: 352 NQGLKSYRDLPLRLAEFGSCHRYESSGSMHGLMRVRGFVQDDAHIFC-TEDQIESECAAF 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 ++ LG S ++ + P S E +T + Sbjct: 411 IELLSSVYKDLGFDSFEIKLSTRPEVRIGSDEAWDKVET-----------------ALEN 453 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + + I A Y D KL D++ + ++ G Sbjct: 454 AIRKVGAAYEIDPGEGAFYGPKLDF---KLTDAIGRKWQCGTFQVDPNLPTRLG------ 504 Query: 298 MSATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G DG H + +G+ ++ ++ GK W S++ Sbjct: 505 --AEYIGEDGAKHRPYMLHRAILGSFERFIGILIENYAGKLPFWLAPRQVVVASIV---- 558 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 ++ A L G D E+I + + P+ + +G + V V Sbjct: 559 --SDADPYVAEVVAALRARGVRAEADTRNEKINYKVREHSVGKVPVILAIGMQEVEARSV 616 Query: 417 EIKHRLTGIREDMSLEEVINYAS 439 ++ E M L++V++ + Sbjct: 617 SVRRLGETRTESMGLDQVVDQLA 639 >gi|229918663|ref|YP_002887309.1| prolyl-tRNA synthetase [Exiguobacterium sp. AT1b] gi|229470092|gb|ACQ71864.1| prolyl-tRNA synthetase [Exiguobacterium sp. AT1b] Length = 569 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 122/269 (45%), Positives = 165/269 (61%), Gaps = 4/269 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P L+E P DAE SH+L++R G I Q++ GIYS+LPLG K L N+ IIREE Sbjct: 4 MKQSRLLMPTLREVPADAEAVSHQLLVRGGFIRQNAAGIYSYLPLGHKVLHNIQTIIREE 63 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P +Q A+LW E+GR+ YG E++RL DR+D+ G THEE++T I R Sbjct: 64 MNRAGAQELLMPAIQPAELWEETGRWGIYGPELMRLTDRHDRRFALGATHEELITSIVRD 123 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ K+RDE RPRFG++R REFLMKDAYSF T E Y M+ + Sbjct: 124 ELNSYKKLPMNLYQIQTKYRDERRPRFGLLRGREFLMKDAYSFHATQEDLDEEYTNMYNA 183 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK P+ A+SG IGG +HEF LAD GE + + D + N + Sbjct: 184 YSRIFDRTGLKYRPVVADSGAIGGKDTHEFQALADIGEDTIVYT----DTSNYAANIEMA 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFD 269 + + + + P N + D Sbjct: 240 ETLDRYEMQQADVRPLEKVDTEENRTIED 268 Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 73/186 (39%), Positives = 107/186 (57%), Gaps = 4/186 (2%) Query: 261 DVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ D P+ ARGIEVG +F GT+YS M ATF +G+ + MG YG Sbjct: 384 DLRFVVEGDLAPDESGPVRFARGIEVGQVFKLGTRYSEAMGATFLNEEGRAEPLIMGCYG 443 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R ++A++E HD +GI+WP +VAPF + LI I A D+ + ++Y L + D Sbjct: 444 IGVSRTLSAIVEQHHDDRGIVWPRNVAPFDLHLIAINAKDETQVELANRLYEELGQT-YD 502 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V +DD E+ G +FA ADL+G P++V VG K + VE+K R TG + S++E+ Sbjct: 503 VLFDDRKERAGVKFADADLIGLPIRVNVGKK-AGEGIVEVKVRATGEVIETSIDELKEVI 561 Query: 439 SHRFSN 444 + +FS Sbjct: 562 ASKFSE 567 >gi|229845777|ref|ZP_04465889.1| prolyl-tRNA synthetase [Haemophilus influenzae 7P49H1] gi|229810781|gb|EEP46498.1| prolyl-tRNA synthetase [Haemophilus influenzae 7P49H1] Length = 572 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 145/428 (33%), Positives = 203/428 (47%), Gaps = 39/428 (9%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V ++REE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y IF+RLGL ++A++G IGG SHEF VLA +GE V DF E Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDFAANIELAEAI 239 Query: 236 -------------NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 D + ++ +VEQ+ P T K D + RG Sbjct: 240 AIGERQAPTAEMCLVDTPNAKTIAELVEQFNLPIEKTVKTLIVKGADENQPLVALIIRGD 299 Query: 283 EVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 + + F + G +G + + I + Sbjct: 300 HELNEIKAQKHPLVADPLEFADETEIKAKIGAGVGSLGPVNLNIPAIIDRTVALMSDFSC 359 Query: 343 SVAPFKISLINIKAHDQVCRDACEKIYA------------RLS-KVGCDV--FWDDMGEQ 387 N+ V + L K G +V + Q Sbjct: 360 GANIDGKHYFNVNWVRDVAMPEVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIF-----Q 414 Query: 388 IGSQFAVA 395 +G +++ A Sbjct: 415 LGKKYSEA 422 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 69/188 (36%), Positives = 106/188 (56%), Gaps = 4/188 (2%) Query: 261 DVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P+ K RGIEVGHIF G KYS + AT +G DGK + MG YG Sbjct: 384 DLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGKKYSEAVKATVQGEDGKPLVMTMGCYG 443 Query: 319 IGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKVG 376 IG RVVA+ IE HD + I D +APF ++++ + + + E++Y L G Sbjct: 444 IGVTRVVASAIEQHHDDRGIIWPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQG 503 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV +DD E+ G FA +L+G P V++G K + + ++E K+R TG +E +S +++++ Sbjct: 504 VDVIFDDRKERPGVMFADMELIGIPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLS 563 Query: 437 YASHRFSN 444 + + N Sbjct: 564 VLNEKLGN 571 >gi|255692010|ref|ZP_05415685.1| threonine--tRNA ligase [Bacteroides finegoldii DSM 17565] gi|260622256|gb|EEX45127.1| threonine--tRNA ligase [Bacteroides finegoldii DSM 17565] Length = 646 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 76/445 (17%), Positives = 149/445 (33%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L KG+ WLP G + +R Q R Sbjct: 230 EYLVLLEEAKKRDHRKIGKEMQLFM-FSETVGKGLPMWLPKGTALRLRLQEFLRRIQTRY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + L+V SG Y YGK+ + + P + +I+++ Sbjct: 289 DYQEVITPPIGNKLLYVTSGHYAKYGKDAFQPIHTPEEGEEYFLKPMNCPHHCEIYKNFP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F + + ++ Sbjct: 349 RSYKDLPLRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDE-FLRVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + ++ + D + + D + + Sbjct: 408 SIVFRSMNFQNFEAQISLR--------------DKVNREKYIGSDDNWEKAEQAIIEACE 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + +E A Y D + D++ ++ ++ Sbjct: 454 EKGLPAKIEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFEL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G+D + H + G+M AV+ GK +W + I + Sbjct: 503 EYMGSDNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LTPDQVAILPISE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + E++ L DD E+IG + ++ P +IVG K + +V ++ Sbjct: 557 KFNEYAEQVKMYLKTHEIRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVSVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M EE + N Sbjct: 617 RQGEGDKGTMKFEEFAKILNEEVQN 641 >gi|239947855|ref|ZP_04699608.1| threonyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes scapularis] gi|241116864|ref|XP_002401645.1| threonyl-tRNA synthetase, putative [Ixodes scapularis] gi|215493189|gb|EEC02830.1| threonyl-tRNA synthetase, putative [Ixodes scapularis] gi|239922131|gb|EER22155.1| threonyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes scapularis] Length = 635 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 72/439 (16%), Positives = 151/439 (34%), Gaps = 40/439 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y + + RD +L L + ++G+ W G + + IR++ + Sbjct: 230 NYLFMLEEAEKRDHRKLGRELDLF--HFQEEAQGMVFWHDKGWSIYNIIEQYIRKKIRKN 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G IE+ P L LW SG + + +M + +DK + P + IF+ IKS Sbjct: 288 GYIEVKTPVLVDKSLWEASGHWKKFRDDMF-ALETDDKTLALKPMNCPCHVQIFKQGIKS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + L R+E G+MR R + DA+ F + + + + Sbjct: 347 YRDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETVSF-CKLLTE 405 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G I ++ P S E D + + Sbjct: 406 VYKDFGFNDIKVKFSDRPEIRAGSDE-----------------VWDKAENALKEAVEKAG 448 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 ++ A Y + L D++ + ++ F + + A++ Sbjct: 449 FTYTLNPGEGAFYGPKLEF---VLTDAIGRQWQCGTLQMD----FVLPER----LDASYI 497 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 A G+ + +G++ ++ + G+ +W + + Sbjct: 498 AASGEKKRPVMLHRAILGSLERFIGILIEEYAGRFPLW------ITPIQVAVATITSDLN 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D ++ L G + ++I + P+ ++G + + +V I+ Sbjct: 552 DYALEVQKALIDNGVRTDINISPDKINYKIREFSNQKIPMIAVIGKQEKENKQVTIRRLG 611 Query: 423 TGIREDMSLEEVINYASHR 441 T +E +S+E++I Sbjct: 612 TTEQEVLSIEQLIALVKEE 630 >gi|317495533|ref|ZP_07953901.1| threonyl-tRNA synthetase [Gemella moribillum M424] gi|316914347|gb|EFV35825.1| threonyl-tRNA synthetase [Gemella moribillum M424] Length = 647 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 156/444 (35%), Gaps = 35/444 (7%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 ++ + + + RD +L + T + G+ WLP G + I +++ Sbjct: 230 QHLVRLQEARERDHRKLGKELGIFTT-SQKVGAGLPLWLPNGATIRRTIERYIVDKEVEL 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P L S DL++ SG ++ Y ++M + + + M+ P + ++++ S Sbjct: 289 GYDHVYTPVLGSKDLYITSGHWEHYQEDMFPPMEMDHETMVLRPMNCPHHMMVYKNERHS 348 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR LP ++ + R E ++ + + + P+ K + Sbjct: 349 YRELPIRIAELGMMHRYESSGAVSGLQRVRGMTLNDAHIFVRPDQLKDEFKLTVGLIEEA 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDII 243 + LG+ + R D T+ + D + D++ Sbjct: 409 YKDLGITNFSYRLS--------------YRDPENTEKYFDDDVMWNNAQQMLKETADELG 454 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 E A Y DV E ++ + + +S ++ F ++ + Sbjct: 455 LDYVEAEGEAAFYGPKLDVQVET---AIGKQETLSTIQLD----FLLPERF----ELEYI 503 Query: 304 GADGKDHYVQMGSYGIG--AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DGK H + GI R+VA ++E + I ++ Sbjct: 504 GEDGKAHRPVVIHRGIVSTMERMVAFLLEEYKGDLPTWLAPNQVRI------IPVNNDYH 557 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++I L K G V DD E++G + A P +++G K V + V ++ Sbjct: 558 YDYSKEIMQELKKAGVKVAIDDRDEKLGYKIREAANKKIPYTLVIGDKEVENKGVNVRTF 617 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +++ S E + Sbjct: 618 GSHDQKEESFVEFKENILKEINER 641 >gi|289549510|ref|YP_003470414.1| Threonyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] gi|289179042|gb|ADC86287.1| Threonyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] Length = 638 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 146/442 (33%), Gaps = 41/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 YF + + R+ +L L M + + G+ +L GQ + + +RE Q + Sbjct: 232 YFEFLREAEARNHRKLGKQLKLF--MFSEEAPGMPFYLSNGQFVRNQMENFLREIQLKND 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW ESG +D Y + M ++ P + IF++ ++SY Sbjct: 290 YDEVRTPLMMNQKLWEESGHWDHYHENM-YFTKVDENDYALKPMNCPGHMLIFKNELRSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 ++LP + R E G++R R F DA+ F K L++ Sbjct: 349 KDLPLRMAEFGQVHRHEFSGALNGLLRVRTFCQDDAHIF-----IMKSQIKSEVEDILKL 403 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 I + + T + S D++ Sbjct: 404 ID--------------YIYSVFGFTYSIELSTRPEDYLGELKLWNEAEQSLANVLDELGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 +I E A Y DVH + D+L + + + ++ F K+ T+ Sbjct: 450 KYTINEGDGAFYGPKIDVH---IKDALNRSHQCATVQLD----FQMPEKFD----LTYIN 498 Query: 305 ADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + G++ ++ G +W +NI Sbjct: 499 EQNEKERPVVLHRAIFGSLDRFFGILIEHFKGAFPLW------MAPVQVNIIGVSDNNTA 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K++ L V DD E++G + + + P +++G ++ V + Sbjct: 553 YVNKVFEALQNNNIRVVIDDRDEKLGKKIRESQMKKIPYTLVLGDHEQENNVVSARKYSH 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 E M ++ I + Sbjct: 613 EDNELMDIQAFIAQLQEEVESK 634 >gi|293376470|ref|ZP_06622699.1| threonine--tRNA ligase [Turicibacter sanguinis PC909] gi|325842051|ref|ZP_08167588.1| threonine--tRNA ligase [Turicibacter sp. HGF1] gi|292644892|gb|EFF62973.1| threonine--tRNA ligase [Turicibacter sanguinis PC909] gi|325489773|gb|EGC92129.1| threonine--tRNA ligase [Turicibacter sp. HGF1] Length = 645 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 69/441 (15%), Positives = 160/441 (36%), Gaps = 32/441 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L IL+E RD + +L L T +G+ WLP G K + I E + G Sbjct: 230 LRILEERKERDHKKLGRELELFT-FSPLVGQGLPIWLPNGMKVRQQIERYITELEEDYGY 288 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 ++ P + S DL+ SG + Y ++M + +++ ++ P ++++ ++SYR Sbjct: 289 QHVATPVMGSVDLYRTSGHWAHYQEDMFVPMEMDNEELVLRPMSCPHHMMVYKTKLRSYR 348 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 +LP + + ++ R E + + + P+ K +++ R+ Sbjct: 349 DLPIRYAEQVIQHRFEASGALTGLERVRAMTLTDSHLFVRPDQIKEEFSRCLELIHRVIK 408 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 G++ R + F + + Sbjct: 409 DFGVEINYYRLSLRDPENKE-------------KYFDDDQMWENAESMLRETLIENNIPF 455 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y D+ ++ +L + +S ++ F ++ T+ Sbjct: 456 IEAEGEAAFYGPKLDI---QIKTALGHDITMSTIQLD----FLLPERFD----LTYVSET 504 Query: 307 GKDHYVQMGSYG-IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 G+ + G IG A + ++ G +W + I ++Q + Sbjct: 505 GEKVRPVVMHRGLIGTYERFMAYLIETYKGAFPLWLA-----PTQVTVIPVNNQYHLEYA 559 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +++ L K + D+ E++G + + P+ +++G K V++++V + Sbjct: 560 KEVAKELRKYRVRLEIDEREEKMGYKIRESQTKKIPMSIVLGDKEVANNEVTFRRFGEQK 619 Query: 426 REDMSLEEVINYASHRFSNNR 446 + + L+E +++ + + Sbjct: 620 TQTLPLKEFVHFLVEEIAERK 640 >gi|21230114|ref|NP_636031.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769896|ref|YP_244658.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. 8004] gi|81304150|sp|Q4UQN5|SYP_XANC8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|81860394|sp|Q8PCS4|SYP_XANCP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|21111643|gb|AAM39955.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575228|gb|AAY50638.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. 8004] Length = 564 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 116/250 (46%), Positives = 158/250 (63%), Gaps = 1/250 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 1 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 61 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYTPTAEEAAAEFARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT Y+ M + Sbjct: 121 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDADMAREYDNMRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+RIF RLGL+ ++A+SG IGGD S EF V+A++GE + D+ E Sbjct: 181 YIRIFTRLGLEFRAVQADSGAIGGDASQEFHVIAESGEDSLAF-STGSDYAANVETASAA 239 Query: 241 DIISLNSIVE 250 + E Sbjct: 240 LPAPRPAAGE 249 Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats. Identities = 61/182 (33%), Positives = 92/182 (50%), Gaps = 2/182 (1%) Query: 259 TSDVHNEKLFD-SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +DV N D + + RGIEVGH+F G+KY+ + AT +GK ++MG Y Sbjct: 381 VADVRNVVDGDRASDGGELRLTRGIEVGHVFQLGSKYAEALQATVLDENGKAAVMKMGCY 440 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVG 376 GIG R+VAA IE +HD GI+WP +AP+K+ + I D A + L G Sbjct: 441 GIGISRIVAAAIEQNHDDAGIVWPAPMAPWKVVVCVINPKQDAQVAAAAGDLLEELIAAG 500 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D DD G + G+ FA +LLG P +V+V + ++ E + R E++ + + Sbjct: 501 IDAALDDRGLRPGAMFADMELLGVPHRVVVSERGLAAGTFEYRARTAESAENLDKAGLFS 560 Query: 437 YA 438 Sbjct: 561 RL 562 >gi|49474171|ref|YP_032213.1| threonyl-tRNA synthetase [Bartonella quintana str. Toulouse] gi|73919771|sp|Q6FZZ7|SYT_BARQU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|49239675|emb|CAF26046.1| Threonyl-tRNA synthetase [Bartonella quintana str. Toulouse] Length = 658 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 83/445 (18%), Positives = 155/445 (34%), Gaps = 39/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD ++ L + G+ W G K N+ + +R + Sbjct: 233 KAYLHMLEEAEKRDHRRLGREMDLF--HFQEDGPGMIFWHQKGWKMFQNLISYMRRRLDD 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-----MIYGPTHEEVMTDIF 118 E++ P + LW SG + Y + M + + P + IF Sbjct: 291 HQYSEVNAPQVLDKSLWELSGHWGWYKENMFKAIPAIEDWDDKCIYALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + + R E G+MR R F DA+ F + + N Sbjct: 351 KHSLKSYRDLPVRLAEFGVVHRYEPSGALHGLMRVRSFTQDDAHIFCTDEQLADECLNIN 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L + G K I ++ + P S A+ + M+ + + T Sbjct: 411 -DLILSTYADFGFKEISLKLSTRPEKRVGSDSLWDHAE----------NIMESVLKTIET 459 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 F I SI+ A Y + L D++ + ++ F ++ Sbjct: 460 KFAGQIK-TSILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVD----FNLPERFD-- 509 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + D + + G+M ++ + G +W ++ Sbjct: 510 --AFYIDKDSEKRQPVMIHRAIFGSMERFLGILIENFAGHMPLWLAPEQVVVAAIT---- 563 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + +KI ARL VG D E+I + L P+ ++ G + + V Sbjct: 564 --SEANEYAKKITARLKAVGLSAKSDLRNEKINYKIREHSLQKVPVILVCGKREAETNSV 621 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + + +S+EE I + Sbjct: 622 SMRRLGSTDQVFLSIEETIEQLKNE 646 >gi|188993111|ref|YP_001905121.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. B100] gi|226701356|sp|B0RVJ2|SYP_XANCB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|167734871|emb|CAP53083.1| unnamed protein product [Xanthomonas campestris pv. campestris] Length = 564 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 116/250 (46%), Positives = 158/250 (63%), Gaps = 1/250 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 1 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 61 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYTPTAEEAAAEFARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT Y+ M + Sbjct: 121 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDADMAREYDNMRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+RIF RLGL+ ++A+SG IGGD S EF V+A++GE + D+ E Sbjct: 181 YIRIFTRLGLEFRAVQADSGAIGGDASQEFHVIAESGEDSLAF-STGSDYAANVETASAA 239 Query: 241 DIISLNSIVE 250 + E Sbjct: 240 LPAPRPAAGE 249 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 61/182 (33%), Positives = 92/182 (50%), Gaps = 2/182 (1%) Query: 259 TSDVHNEKLFD-SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +DV N D + + RGIEVGH+F G+KY+ + AT +GK ++MG Y Sbjct: 381 VADVRNVVDGDRASDGGELRLTRGIEVGHVFQLGSKYAEALQATVLDENGKAAVMKMGCY 440 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVG 376 GIG R+VAA IE +HD GI+WP +AP+K+ + I D A + L G Sbjct: 441 GIGISRIVAAAIEQNHDDAGIVWPAPMAPWKVVVCVINPKQDAQVAAAAGDLLEELIAAG 500 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D DD G + G+ FA +LLG P +V+V + ++ E + R E++ + + Sbjct: 501 IDAALDDRGLRPGAMFADMELLGIPHRVVVSERGLAAGTFEYRARTAESAENLDKAGLFS 560 Query: 437 YA 438 Sbjct: 561 RL 562 >gi|77463957|ref|YP_353461.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodobacter sphaeroides 2.4.1] gi|123757748|sp|Q3J0X4|SYT_RHOS4 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|77388375|gb|ABA79560.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodobacter sphaeroides 2.4.1] Length = 646 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 151/443 (34%), Gaps = 45/443 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD ++ L + + + G+ W P G + + +R + Sbjct: 234 KAYLHMLEEAAKRDHRKLGREMELF--HLQEEAPGMVFWHPNGWQIYRTLEDYMRGRLRQ 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-----MIYGPTHEEVMTDIF 118 G E+ P + LW SG +++Y + M + + A P + ++ Sbjct: 292 AGYKEIRTPQVVDRKLWEASGHWEAYKENMFIVEVEEEHAKEKRINALKPMNCPCHVQVY 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F+ DA+ F T + + Sbjct: 352 NQGLKSYRDLPLRLAEFGSCHRYESSGSMHGLMRVRGFVQDDAHIFC-TEDQIESECAAF 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 ++ LG S ++ + P S E +T + Sbjct: 411 IELLSSVYKDLGFDSFEIKLSTRPEVRIGSDEAWDKVET-----------------ALEN 453 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + + I A Y D KL D++ + ++ G Sbjct: 454 AIRKVGAAYEIDPGEGAFYGPKLDF---KLTDAIGRKWQCGTFQVDPNLPTRLG------ 504 Query: 298 MSATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G DG H + +G+ ++ ++ GK W S++ Sbjct: 505 --AEYIGEDGAKHRPYMLHRAILGSFERFIGILIENYAGKLPFWLAPRQVVVASIV---- 558 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 ++ A L G D E+I + + P+ + +G + V V Sbjct: 559 --SDADPYVAEVVAALRARGVRAEADTRNEKINYKVREHSVGKVPVILAIGMQEVEARSV 616 Query: 417 EIKHRLTGIREDMSLEEVINYAS 439 ++ E M L++V++ + Sbjct: 617 SVRRLGETRTESMGLDQVVDQLA 639 >gi|126462800|ref|YP_001043914.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029] gi|166225489|sp|A3PLC6|SYT_RHOS1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|126104464|gb|ABN77142.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029] Length = 646 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 151/443 (34%), Gaps = 45/443 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD ++ L + + + G+ W P G + + +R + Sbjct: 234 KAYLHMLEEAAKRDHRKLGREMELF--HLQEEAPGMVFWHPNGWQIYRTLEDYMRGRLRQ 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-----MIYGPTHEEVMTDIF 118 G E+ P + LW SG +++Y + M + + A P + ++ Sbjct: 292 AGYKEIRTPQVVDRKLWEASGHWEAYKENMFIVEVEEEHAKEKRINALKPMNCPCHVQVY 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F+ DA+ F T + + Sbjct: 352 NQGLKSYRDLPLRLAEFGSCHRYESSGSMHGLMRVRGFVQDDAHIFC-TEDQIESECAAF 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 ++ LG S ++ + P S E +T + Sbjct: 411 IELLSSVYKDLGFDSFEIKLSTRPEVRIGSDEAWDKVET-----------------ALEN 453 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + + I A Y D KL D++ + ++ G Sbjct: 454 AIRKVGAAYEIDPGEGAFYGPKLDF---KLTDAIGRKWQCGTFQVDPNLPTRLG------ 504 Query: 298 MSATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G DG H + +G+ ++ ++ GK W S++ Sbjct: 505 --AEYIGEDGAKHRPYMLHRAILGSFERFIGILIENYAGKLPFWLAPRQVVVASIV---- 558 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 ++ A L G D E+I + + P+ + +G + V V Sbjct: 559 --SDADPYVAEVVAALRARGVRAEADTRNEKINYKVREHSVGKVPVILAIGMQEVEARSV 616 Query: 417 EIKHRLTGIREDMSLEEVINYAS 439 ++ E M L++V++ + Sbjct: 617 SVRRLGETRTESMGLDQVVDQLA 639 >gi|152996360|ref|YP_001341195.1| prolyl-tRNA synthetase [Marinomonas sp. MWYL1] gi|189083502|sp|A6VXT1|SYP_MARMS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|150837284|gb|ABR71260.1| prolyl-tRNA synthetase [Marinomonas sp. MWYL1] Length = 574 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 159/235 (67%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L++ P DA + SH+LM+R GMI Q SKG+Y+WLP G K + I+R+E Sbjct: 1 MRASNYLFSTLRDAPTDAVVTSHQLMIRAGMIRQVSKGLYTWLPTGLKVFRKIENIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G++E+ +P +Q A+LW E+GR+ YG E+LRL DR+ + GPTHEEV+T++ R+ Sbjct: 61 MEKAGSLEVMMPGVQPAELWQETGRWQKYGPELLRLQDRHGREYCLGPTHEEVITELARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP F+QIQ KFRDE+RPRFGVMRSREF MKDAYSF + E + +Y+ M + Sbjct: 121 ELTSYKQLPMNFFQIQTKFRDEVRPRFGVMRSREFCMKDAYSFHVGAESLQETYDIMHKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +F R+GL P+RA++G IGG SHEF VLAD+GE + S DF E Sbjct: 181 YCNVFDRIGLNYRPVRADTGSIGGAYSHEFHVLADSGEDDIAFSDS-SDFAANIE 234 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 70/194 (36%), Positives = 109/194 (56%), Gaps = 3/194 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + +D+ N D P+ + V RGIEVGHIF G +Y+ + AT +GK Sbjct: 380 ERDCAEFEVADIRNVVEGDPSPDGQGTIVIKRGIEVGHIFQLGQQYAEALKATVLDENGK 439 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 + MG YGIG R+VAA IE + D KGI+WP+S+APF I+++ + + R C++ Sbjct: 440 AQVMHMGCYGIGVSRIVAAAIEQNFDEKGILWPESIAPFDIAIVAMNYDKSEAVRTECDR 499 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +YA L G DV DD E+ G +FA +LLG P +++VG K + +E K+R G E Sbjct: 500 LYAELKAKGLDVLLDDRKERPGVKFADCELLGIPHRLVVGDKGLEKGTLEYKYRKAGDNE 559 Query: 428 DMSLEEVINYASHR 441 D+++ + + + + Sbjct: 560 DIAIADAVEFILSK 573 >gi|34580760|ref|ZP_00142240.1| threonyl-tRNA synthetase [Rickettsia sibirica 246] gi|28262145|gb|EAA25649.1| threonyl-tRNA synthetase [Rickettsia sibirica 246] Length = 635 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 73/438 (16%), Positives = 153/438 (34%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + RD +L L + ++G+ W G + + IR++ + G Sbjct: 231 YLLMLEEAEKRDHRKLGRELDLF--HFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L LW SG ++ + +M + +DK + P + IF+ IKSY Sbjct: 289 YTEVKTPVLVDKSLWEASGHWEKFRDDMF-ALETDDKTLALKPMNCPCHVQIFKQGIKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + L R+E G+MR R + DA+ F + + + + + Sbjct: 348 RDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAAEQITDETVSF-CKLLTEV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P S+E D + + Sbjct: 407 YKDFGFTDIKVKFSDRPEIRAGSNE-----------------VWDKAENALKEAVEQAGF 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ A Y + L D++ + ++ F + + A++ Sbjct: 450 NYTLNPGEGAFYGPKLEF---VLTDAIGRQWQCGTLQMD----FVLPER----LDASYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 A G+ + +G++ ++ + G+ +W + I D Sbjct: 499 ASGEKKRPVMLHRAILGSLERFIGILIEEYAGRFPLW------LAPVQVAIATITSDLND 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L G + ++I + P+ ++G + + +V I+ T Sbjct: 553 YALEVQKALIDNGVRTDVNISPDKINYKIREFSNQKIPMIAVIGKQEQENKQVAIRRLGT 612 Query: 424 GIREDMSLEEVINYASHR 441 +E +S+E++I Sbjct: 613 TDQEVLSVEQLIAVVKEE 630 >gi|315918544|ref|ZP_07914784.1| prolyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] gi|317059560|ref|ZP_07924045.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|313685236|gb|EFS22071.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|313692419|gb|EFS29254.1| prolyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] Length = 569 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 117/231 (50%), Positives = 158/231 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEI SH+L+LR GMI + + G+Y++LPLG + L V IIREE Sbjct: 1 MRFSKAYIKTLKETPKEAEIISHQLLLRAGMIKKLASGLYTYLPLGFRTLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ +P LQ A+LW ESGR++ G+EM+RL DR+ + + GPT+EEV+TDI R+ Sbjct: 61 MDRAGSQELLMPVLQPAELWQESGRWNVMGEEMVRLKDRHQRDFVLGPTNEEVITDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ K RDE RPRFG+MRSREF+MKDAYSF + E + M + Sbjct: 121 DISSYKSLPINLYHIQTKVRDERRPRFGLMRSREFIMKDAYSFHTSQESLDEEFENMKNT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S Sbjct: 181 YTRIFERCGLKFRPVEADSGAIGGSGSQEFHVLAESGEDEIIYSDGCSYAA 231 Score = 168 bits (426), Expect = 2e-39, Method: Composition-based stats. Identities = 69/185 (37%), Positives = 101/185 (54%), Gaps = 3/185 (1%) Query: 259 TSDVHNEKLFDSLPE--NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 D+ K + P K SARGIE GHIF G KYS + A++ G+ + MG Sbjct: 382 VKDIRLVKAGEDCPRSNGKLHSARGIECGHIFKLGDKYSKALGASYLDEKGESKIMLMGC 441 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R +AA IE ++D GIIWP ++AP+ + +I + EKIY +L+ Sbjct: 442 YGIGVGRTMAAAIEQNYDEHGIIWPSALAPYLVDVIPANIKNAEQMQLAEKIYEQLNAEH 501 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D DD E+ G +F ADL+GFP +VI G K +++ VE+K R TG ++ ++E+I+ Sbjct: 502 LDAMLDDRDERPGFKFKDADLIGFPFKVICGKK-AAENIVELKIRKTGETFEIPVDEIIS 560 Query: 437 YASHR 441 Sbjct: 561 KIKDL 565 >gi|223997660|ref|XP_002288503.1| threonyl-trna synthetase [Thalassiosira pseudonana CCMP1335] gi|220975611|gb|EED93939.1| threonyl-trna synthetase [Thalassiosira pseudonana CCMP1335] Length = 592 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 79/441 (17%), Positives = 156/441 (35%), Gaps = 39/441 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIRE 59 ++ K + ++E RD + KL L + I + G+ W P G + +E Sbjct: 163 KQLKLYKKRMEEAKKRDHRVLGKKLDLFS--IQEDAGGGLVFWHPKGSTVRRKIEDFWKE 220 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 + P + + DLW SG YD Y + M D ++ P + +F+ Sbjct: 221 AHIAQDYDIVYTPHIANLDLWKTSGHYDFYREGMFDQMDVENEVYQIKPMNCPFHCLMFK 280 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 I+SYR+LPF + ++ +R E G+MR R F DA+ F L + + + Sbjct: 281 DSIRSYRDLPFRWGELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLQSEIVD-VL 339 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 I R G + + P S D + Sbjct: 340 KLTKDILSRFGFNKYELMVSTRPEKS-----------------VGSDQIWDDATKALVGA 382 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 D++ E A Y D+ K+ D++ + S + F ++ L Sbjct: 383 LDELGWEYGTDEGGGAFYGPKIDL---KIKDAIGRTWQCSTVQCD----FNLPERFDLEY 435 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 K+ + + G++ ++ + G W + + Sbjct: 436 ---VSAEGKKERPIMVHRAIFGSIERFFGILVENTAGDLPFWLAPTQLKLLPVT------ 486 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D C+++ + +K+G V D E++ Q A+ P+ +VG K + + + + Sbjct: 487 DAVVDYCKEVAKKANKMGLRVEVDRGAERLAKQIRNAEQSRIPVMAVVGMKEMEEGTLAL 546 Query: 419 KHRLTGIREDMSLEEVINYAS 439 + R G +++++++ Sbjct: 547 RSRKLGDLGSFAVDDLLSELK 567 >gi|255262353|ref|ZP_05341695.1| threonyl-tRNA synthetase [Thalassiobium sp. R2A62] gi|255104688|gb|EET47362.1| threonyl-tRNA synthetase [Thalassiobium sp. R2A62] Length = 649 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 78/440 (17%), Positives = 145/440 (32%), Gaps = 45/440 (10%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD ++ L + + + G W P G + +R +Q G Sbjct: 238 LHMLEEAAKRDHRKLGREMDLF--HMQEEAPGQVFWHPNGWTVYTELQDYMRRKQRAGGY 295 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIFRSH 121 +E++ P + LW SG ++ Y + M + R P + IF Sbjct: 296 VEVNTPQVVDRKLWEASGHWEKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQG 355 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR+LP + R E G+MR R F D + F + + + Sbjct: 356 LKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCREDQVQEET-AVYIEF 414 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 I+ LG + ++ P S E D + T Sbjct: 415 LSTIYKDLGFEKFRVKYSDRPDTRAGSDE-----------------VWDKAEQALLTATR 457 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + A Y + L D++ + + ++ F + + A Sbjct: 458 NAGIEPEMNPGEGAFYGPKLEF---VLTDAIGRDWQCGTHQVD----FVLPER----LDA 506 Query: 301 TFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 T+ G GK V + +G+ ++ H GK W +++ Sbjct: 507 TYIGTDGGKHRPVMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVTTIV------S 560 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D +I L G D E+I + L P+ + +G + V + V ++ Sbjct: 561 DADDFAAEIVETLRSKGVRAEADTRNEKINYKVREHSLAKVPVILAIGQREVDERTVSVR 620 Query: 420 HRLTGIREDMSLEEVINYAS 439 + ++ +EV + Sbjct: 621 RLGEKQSKVIAFDEVAPQLA 640 >gi|326925418|ref|XP_003208912.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like [Meleagris gallopavo] Length = 470 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 155/457 (33%), Positives = 226/457 (49%), Gaps = 46/457 (10%) Query: 3 RSKYFLPIL---------QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNV 53 S+ F P+ + + SH+LML+ G+IH S G Y LP ++++ + Sbjct: 37 LSQLFQPLNLQVGGVAGCESQAAELSCRSHRLMLQGGLIHPASPGCYHLLPPAVRSMEKL 96 Query: 54 NAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEV 113 +I G ++++P+L SA+LW SGR++ G E+ RLADR+ K GPTHEE Sbjct: 97 IRLIDGAMRNIGGQKVNMPSLSSAELWRASGRWEQMGPELFRLADRHSKEYCLGPTHEEA 156 Query: 114 MT-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKH 172 +T + SYR+LP YQ+ KFRDE +PRFG++RSREF MKD Y+FD + E ++H Sbjct: 157 VTELVAAHSNLSYRHLPLRLYQVTRKFRDEPKPRFGLLRSREFYMKDMYTFDTSEEAARH 216 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 +Y + +Y +F LGL+ + +RA +G IGG SHEF + AD GE ++ Sbjct: 217 TYELVCRAYRSLFKHLGLRCVQVRAATGTIGGTASHEFQLPADIGEDRLVLCPA------ 270 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 A V E+ K +RGIEVGH FY GT Sbjct: 271 --------------------GHFAANVEMVDEEQTACPTCGEKLTQSRGIEVGHTFYLGT 310 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 KYS +A F + K +MG YG+G R++AA IE I WP +APF+ I Sbjct: 311 KYSSVHNAVFYTPENKLQLAEMGCYGLGVTRILAASIEVLSTEDSIRWPSLIAPFQACFI 370 Query: 353 NIKA--HDQVCRDACEKIYARLSKV-----GCDVFWDDMGE-QIGSQFAVADLLGFPLQV 404 K ++ E++Y +++ G DV DD + IG + A+ LG+P V Sbjct: 371 PPKKGSKEEEGAVLLEQLYDDVAEALPCLVG-DVVLDDRTQMTIGKRLKDANKLGYPYVV 429 Query: 405 IVGSKFVSDSKV-EIKHRLTGIREDMSLEEVINYASH 440 I G + D V E+ + TG ++ E VI S Sbjct: 430 IAGRRACEDPPVFEVWDQSTGTVLYLTKEGVIELLSK 466 >gi|222151097|ref|YP_002560251.1| proline-tRNA ligase [Macrococcus caseolyticus JCSC5402] gi|254782906|sp|B9EBE4|SYP_MACCJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|222120220|dbj|BAH17555.1| proline-tRNA ligase [Macrococcus caseolyticus JCSC5402] Length = 568 Score = 237 bits (604), Expect = 4e-60, Method: Composition-based stats. Identities = 119/319 (37%), Positives = 184/319 (57%), Gaps = 5/319 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L+E P DA+ SH+L+L+ GMI Q + G+YS+LP+ ++ L+ + +I+REE Sbjct: 1 MKQSKMFIPTLREVPSDADSKSHQLLLKAGMIKQVASGVYSYLPIAKRVLNKIESIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +E+ +P LQ ++LW ESGR+ SYG E++R+ DR+ + GPTHEE++T + R Sbjct: 61 MEAIDGVEILMPALQPSELWSESGRWQSYGAELMRMTDRHGREFALGPTHEEIITSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF T +Y M+ + Sbjct: 121 ELKSYKKLPVTLFQIQNKFRDEKRPRFGLLRGREFIMKDAYSFHATEASLDETYQDMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--- 237 Y +IF RL L+ P+ A+SG IGG +HEF+ LA+ GE + C D D+ E Sbjct: 181 YSKIFSRLNLQFRPVIADSGAIGGSHTHEFMALAEIGEDTI-CYTDGSDYAANIEKAEVV 239 Query: 238 -DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + + +++E+ P T+ + L L E + ++ + + + Sbjct: 240 YHPNKKHTEENVLEKVHTPGVKTAQQLADFLKRDLDEIVKSMIVKVDDQFVMFLIRGHHE 299 Query: 297 PMSATFKGADGKDHYVQMG 315 K G +H Sbjct: 300 LNDIKVKSFFGTEHVEMAT 318 Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats. Identities = 65/226 (28%), Positives = 116/226 (51%), Gaps = 3/226 (1%) Query: 220 QVFCSKDFMDFPIPSENTDFDDIISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVS 278 ++ D + + DD +N+ V+ + E + Sbjct: 342 DIYADNSVQDLNNLAVGANEDDYHYVNANVDRDFNVKAYGDFRFILEGEPAADGSGPVKF 401 Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 A GIE+G +F GTKYS M+ATF G+ + MG YGIG R ++AVIE +D KGI Sbjct: 402 AEGIEIGQVFKLGTKYSESMNATFLNDQGRAEPMIMGCYGIGVSRTLSAVIEQHNDDKGI 461 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 IWP ++ P+++ +I++ +V ++ +++Y +V +DD E+ G +F ADL+ Sbjct: 462 IWPTAITPYEVHIISVNPKQEVQKNLADQLYDTYRTQ-YEVLYDDRAERAGVKFNDADLI 520 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 G P++V+VG + +D VE+K+R TG ++ ++ + +++ Sbjct: 521 GIPVRVVVGKQ-AADGIVEVKNRRTGDAVEVHIDNLQETIQSIYAS 565 >gi|76613805|ref|XP_585755.2| PREDICTED: hypothetical protein [Bos taurus] gi|297473149|ref|XP_002686423.1| PREDICTED: hypothetical protein [Bos taurus] gi|296489106|gb|DAA31219.1| hypothetical protein BOS_3571 [Bos taurus] Length = 475 Score = 237 bits (604), Expect = 4e-60, Method: Composition-based stats. Identities = 148/457 (32%), Positives = 230/457 (50%), Gaps = 46/457 (10%) Query: 3 RSKYFLPI-LQENP--------RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNV 53 S+ F P L+E+ D S +LML+ G+IH S G Y LP +A++ + Sbjct: 42 LSRMFQPQKLREDQVLSLEGRSGDLTCKSQRLMLQMGLIHPASPGCYHLLPYTVRAMEKL 101 Query: 54 NAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEV 113 +I +E G ++++P+L A+LW + R+DS G+E+LRL DR+ K GPTHEE Sbjct: 102 VRVIDQEMQTIGGQKVNMPSLSPAELWRATKRWDSMGRELLRLRDRHGKDYCLGPTHEEA 161 Query: 114 MT-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKH 172 +T + SY+ LPF YQ+ KFRDE RPRFG++R REF MKD Y+FD +PE ++ Sbjct: 162 ITALVASQKTLSYKQLPFLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSPEAAQL 221 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 +Y+ + +Y +F+RLGL+ I ++A+ G IGG +SHEF + D GE ++ Sbjct: 222 TYSLVCDAYSSLFNRLGLRCIKVQADVGSIGGMVSHEFQLPVDVGEDRLVVCPSC----- 276 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 A + + + + +GIEVGH FY GT Sbjct: 277 ---------------------HFSANMETLDSSRTNCPACQGPLTETKGIEVGHTFYLGT 315 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 KYS +A F GK +MG YG+G R++AA IE + WP +AP+++ LI Sbjct: 316 KYSSIFNAQFINVHGKPSLAEMGCYGLGVTRILAAAIEVLSTEDCVRWPGLLAPYQVCLI 375 Query: 353 NIKA--HDQVCRDACEKIYARLSKV-----GCDVFWDDMGE-QIGSQFAVADLLGFPLQV 404 K ++ + +Y +++ G +V DD IG++ A+ LG+P + Sbjct: 376 PPKKGSKEEAAAELAGDLYNHITEAVPQLQG-EVLLDDRTHLTIGNRLKDANKLGYPFVI 434 Query: 405 IVGSKFVSDSK-VEIKHRLTGIREDMSLEEVINYASH 440 I + + D E+ + TG ++ E V+ S Sbjct: 435 IAAKRALDDPAHFEVWCQNTGEVVFLTREGVLELLSQ 471 >gi|194207413|ref|XP_001492689.2| PREDICTED: prolyl-tRNA synthetase 2, mitochondrial (putative) [Equus caballus] Length = 472 Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 152/457 (33%), Positives = 227/457 (49%), Gaps = 46/457 (10%) Query: 3 RSKYFLPI-LQEN--PR------DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNV 53 S+ F P L+E+ P D S +LML+ G+IH S G Y LP +AL+ + Sbjct: 39 LSRMFQPQNLREDQVPSLEGGSGDLTCKSQRLMLQVGLIHPASPGCYHLLPYTVRALEKL 98 Query: 54 NAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEV 113 +I +E G ++S+P+L A+LW + R+D GKE+LRL DR+ K GPTHEE Sbjct: 99 VRVIDQEMRAIGGQKVSMPSLSPAELWRATNRWDLMGKELLRLRDRHGKEYCLGPTHEEA 158 Query: 114 MT-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKH 172 +T + SY+ LPF YQ+ KFRDE RPRFG++R REF MKD Y+FD +PE ++ Sbjct: 159 VTALVASQKTLSYKQLPFLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSPEAARQ 218 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 +Y + +Y +F RLGL + ++A G IGG +SHEF + AD GE Q Sbjct: 219 TYGLVCDAYSSLFARLGLPCVKVQAGVGSIGGTMSHEFQLPADVGEDQFAVCPSC----- 273 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + A ++ + + +GIEVGH FY GT Sbjct: 274 ---------------------SFSANVETLNLSQTNCPACQGPLTETKGIEVGHTFYLGT 312 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 KYS +A F GK +MG YG+G R++AA IE + WP +AP+++ LI Sbjct: 313 KYSSVFNAQFTNVHGKPSLAEMGCYGLGVTRILAAAIEVLSTEYCLRWPGLLAPYQVCLI 372 Query: 353 NIKA--HDQVCRDACEKIYARLSKV-----GCDVFWDDMGE-QIGSQFAVADLLGFPLQV 404 K ++V + +Y +++ G +V DD IG++ A+ G+P + Sbjct: 373 PPKKGSKEEVATELAGHLYDHITEAVPQLRG-EVLLDDRTHLTIGNRLKDANKFGYPFVI 431 Query: 405 IVGSKFVSDSK-VEIKHRLTGIREDMSLEEVINYASH 440 I G + + E+ + TG ++ E V+ S Sbjct: 432 IAGKRALEAPAHYEVWCQNTGEVVFLTKEGVVGLLSQ 468 >gi|332809089|ref|XP_513427.3| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial [Pan troglodytes] Length = 475 Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 141/439 (32%), Positives = 224/439 (51%), Gaps = 35/439 (7%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 LQ+ D S +LML+ G+I+ S G Y LP +A++ + +I +E G +++ Sbjct: 59 LQDKSDDLTCKSQRLMLQVGLIYPASPGCYHLLPYTVRAMEKLVRVIDQEMQAIGGQKVN 118 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMT-DIFRSHIKSYRNLP 129 +P+L A+LW + R+D GKE+LRL DR+ K GPTHEE +T I SY+ LP Sbjct: 119 MPSLSPAELWQATNRWDLMGKELLRLRDRHGKEYCLGPTHEEAITALIASQKKLSYKQLP 178 Query: 130 FTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F YQ+ KFRDE RPRFG++R REF MKD Y+FD +PE ++ +Y+ + +Y +F++LG Sbjct: 179 FLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSPEAAQQTYSLVCDAYCSLFNKLG 238 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 L + ++A+ G IGG +SHEF + D GE ++ Sbjct: 239 LPFVKVQADVGTIGGTVSHEFQLPVDIGEDRLAICPRC---------------------- 276 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 + A + ++ + +GIEVGH FY GTKYS +A F GK Sbjct: 277 ----SFSANMETLDLSQMNCPACQGPLTKTKGIEVGHTFYLGTKYSSIFNAQFTNVCGKP 332 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA--HDQVCRDACEK 367 +MG YG+G R++AA IE + WP +AP++ LI K +Q + + Sbjct: 333 TLAEMGCYGLGVTRILAAAIEVLSTEDCVRWPSLLAPYQACLIPPKKGSKEQAASELIGQ 392 Query: 368 IYARLSKV----GCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSK-VEIKHR 421 +Y +++ +V DD IG++ A+ G+P +I G + + D E+ + Sbjct: 393 LYDHITEAVPQLHGEVLLDDRTHLTIGNRLKDANKFGYPFVIIAGKRALEDPAHFEVWCQ 452 Query: 422 LTGIREDMSLEEVINYASH 440 TG ++ + V++ + Sbjct: 453 NTGEVAFLTKDGVMDLLTQ 471 >gi|161507864|ref|YP_001577828.1| theronyl-tRNA synthetase [Lactobacillus helveticus DPC 4571] gi|172048343|sp|A8YWE1|SYT_LACH4 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|160348853|gb|ABX27527.1| Theronyl-tRNA synthetase [Lactobacillus helveticus DPC 4571] Length = 644 Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 155/441 (35%), Gaps = 36/441 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + RD L L + + G+ W+P G V I + + G Sbjct: 232 RRQEIKERDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRAVERYIIDREVADGYQ 289 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYR 126 + P L + D + SG + Y +M D D M P + IF+ HI+SYR Sbjct: 290 HVYTPVLMNLDAYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIFKHHIRSYR 349 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ + R E G+ R RE + D ++F + + K+ + ++ Sbjct: 350 DLPLRVAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQTE-FAKILKLIMEVY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + R + F + + + DD+ Sbjct: 409 KDFDITDYYFRLS-------------YRDPKNTDKYFANDEMWEKSQKMLKGAMDDLGLD 455 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y D+ + +L ++ +S ++ F ++ T+ G Sbjct: 456 YVEAEGEAAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPDRF----GLTYVGK 504 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG++H + +G M A + + G W + I +++ + Sbjct: 505 DGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLA-----PVQAEIIPVNNEAHGEY 559 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 EK+ A L+K G V DD E++G + + P +++G + + KV ++ T Sbjct: 560 AEKVRAELAKRGFRVEVDDRNEKMGYKIRESQTQKVPYTLVLGDEEMKSGKVNLRRYGTD 619 Query: 425 IREDMSLEEVINYASHRFSNN 445 SL++ IN + Sbjct: 620 EEISKSLDDFINEIDADVKSY 640 >gi|15892219|ref|NP_359933.1| threonyl-tRNA synthetase [Rickettsia conorii str. Malish 7] gi|22654126|sp|Q92IX4|SYT_RICCN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|15619354|gb|AAL02834.1| threonyl-tRNA synthetase [Rickettsia conorii str. Malish 7] Length = 635 Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 73/438 (16%), Positives = 154/438 (35%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + RD +L L + ++G+ W G + + IR++ + G Sbjct: 231 YLLMLEEAEKRDHRKLGRELDLF--HFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L LW SG ++ + +M + +DK + P + IF+ IKSY Sbjct: 289 YTEVKTPVLVDKSLWEASGHWEKFRDDMF-ALETDDKTLALKPMNCPCHVQIFKQGIKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + L R+E G+MR R + DA+ F + + + + + Sbjct: 348 RDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAAEQITDETVSF-CKLLTEV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P S+E D + + Sbjct: 407 YKDFGFTDIKVKFSDRPEIRAGSNE-----------------VWDKAENALKEAVEQAGF 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ A Y + L D++ + ++ F + + A++ Sbjct: 450 NYTLNPGEGAFYGPKLEF---VLTDAIGRQWQCGTLQMD----FVLPER----LDASYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 A G+ + +G++ ++ + G+ +W + I D Sbjct: 499 ASGEKKRPVMLHRAILGSLERFIGILIEEYAGRFPLW------LAPVQVAIATITSDLND 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L G ++ ++I + P+ ++G + + +V I+ T Sbjct: 553 YALEVQKALIDNGVRTDFNISPDKINYKIREFSNQKIPMIAVIGKQEQENKQVAIRRLGT 612 Query: 424 GIREDMSLEEVINYASHR 441 +E +S+E++I Sbjct: 613 TDQEVLSVEQLIAVVKEE 630 >gi|271967410|ref|YP_003341606.1| threonyl-tRNA synthetase [Streptosporangium roseum DSM 43021] gi|270510585|gb|ACZ88863.1| threonyl-tRNA synthetase [Streptosporangium roseum DSM 43021] Length = 659 Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 68/445 (15%), Positives = 144/445 (32%), Gaps = 37/445 (8%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + G+ + P G + +R Q G Sbjct: 249 YLHMLEEAEKRDHRRLGAELDLFS-FPSELGSGLPVFHPKGGIIRKEMEDYMRRRQGEAG 307 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 ++ P + + L+ SG Y ++M + P + + IFR+ +SY Sbjct: 308 YEFVNTPHITKSQLFETSGHLPWYAEDMFPPFELEGVEYRVKPMNCPMHNLIFRARGRSY 367 Query: 126 RNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + +R E G+ R R D++ + + + L + Sbjct: 368 RELPLRLCEFGSVYRYEKSGVVHGLTRVRGMTQDDSHIYCTREQMVGE-IKSLLTFVLSV 426 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 GL + + D S +FI D + + Sbjct: 427 LRDFGLSEFYLELST----RDDSDKFI-----------GDPADWDEATDALRQTALESGL 471 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + + D++ ++S +++ ++ Sbjct: 472 ELVDDPGGAAFYGPKI---SVQAKDAIGRTWQLSTIQLDLNQP--------KRFELEYQA 520 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG + G++ V+ + +P +AP ++ I I + Sbjct: 521 ADGSRQTPVMIHRALFGSIERFLGVLT---EHYAGAFPPWLAPVQVVGIPIA---EAHAS 574 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + R + G + D +++ + A P ++ G + +++ V + R Sbjct: 575 YLQDVAKRARERGIRIEVDASDDRMQKKIRNAQKSKVPFMLLAGDEDIANGAVSFRFRNG 634 Query: 424 GIREDMSLEEVINYASHRFSNNRPV 448 + + ++E IN V Sbjct: 635 EQKNGVPVDEAINEIVDAIERRIQV 659 >gi|284919690|emb|CAX65467.1| hypothetical protein [Enterobacter hormaechei] Length = 662 Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 72/436 (16%), Positives = 141/436 (32%), Gaps = 39/436 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + + RD +L L ++ G W P G ++ A +R G Sbjct: 253 WLEKTAEAEKRDHRKLGRELDLF--HFQDNAPGAVFWHPRGWTIFQSLIAYMRSRHEVAG 310 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E++ P + LW SG +D+Y M + + P + +F+ IKSY Sbjct: 311 YVEVNTPDVMDRSLWEISGHWDNYRDHMFTTQTEDGRNFALKPMNCPGAVSLFKYGIKSY 370 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R E G++R R F DA+ F + + L I Sbjct: 371 RDLPVRLSEFGKVHRYEPSGSLHGLLRVRHFTQDDAHIFCTLQQVEGEC-KSILQLVLDI 429 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + + ++ + P S D + + + Sbjct: 430 YKQFGFEEVAIKLSTRPEKR-----------------MGSDADWDRLENALSASLEAQGL 472 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 S+ A Y + L D++ + + +++ + Sbjct: 473 QWSVNPGEGAFYGPKLEF---VLRDAIGRDWQCGTLQVDMNLP--------ERFDIGYIA 521 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + G++ ++ + P ++P + ++ I Sbjct: 522 EDGSTKRPVMLHRALFGSLERFTGILL---EHYVGKLPAWLSPVQAVVMTITDK---QHH 575 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E++ L K G D E+IG + L P +IVG + ++V ++ R Sbjct: 576 YAEQVLKALRKKGLRCEADLRNEKIGFKIREQTLARIPFLLIVGDAEENAARVTVRDRTG 635 Query: 424 GIREDMSLEEVINYAS 439 + L E + Sbjct: 636 RCMGTLLLNEAADAIK 651 >gi|221068963|ref|ZP_03545068.1| prolyl-tRNA synthetase [Comamonas testosteroni KF-1] gi|220713986|gb|EED69354.1| prolyl-tRNA synthetase [Comamonas testosteroni KF-1] Length = 580 Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 117/237 (49%), Positives = 160/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ +++ + L+E P DAE+ SHKLM+R GMI + GIY+++P+G + + V AI+REE Sbjct: 1 MKATQFLISTLKEAPADAEVVSHKLMMRAGMIKKLGAGIYNYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE ++P +Q A+LW E+GR++ G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 61 MNRAGAIETTMPVVQPAELWQETGRFEKMGPELLRIQDRHGRDFVIQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 KSY+ LP YQIQ KFRDE RPRFG+MR REF+MKDAYSFD + ++ SY M + Sbjct: 121 EFKSYKQLPKNLYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDKDRDAAQISYQTMREA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R GL+ +RA+SG IGGDLS EF V+A TGE + + D+ E Sbjct: 181 YKRIFDRFGLQYRAVRADSGAIGGDLSEEFQVIASTGEDAIVYCPN-SDYAANIEKA 236 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 69/189 (36%), Positives = 106/189 (56%), Gaps = 3/189 (1%) Query: 257 AATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A +D+ N D P+ + RGIE+GH+FY GTKYS M ATF G +GK + +M Sbjct: 390 AVVADLRNVVAGDRSPDGAGELAIERGIEIGHVFYLGTKYSKAMDATFLGDNGKPQHFEM 449 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLS 373 G YGIG R+ AA +E +HD +G+IWPD++APF + + I + + EK+Y L Sbjct: 450 GCYGIGVTRLPAAAVEQNHDERGMIWPDAIAPFTVVICPIGMGRSEAVKTEAEKLYGELL 509 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G DV DD E+ G+ A +L+G P +V++G + + + VE + R ++ E Sbjct: 510 ALGVDVILDDRDERPGAMLADWELIGVPHRVVLGDRGLKEGVVEYQQRRDTEATKLATNE 569 Query: 434 VINYASHRF 442 V+ + R Sbjct: 570 VLGHLKSRL 578 >gi|291299890|ref|YP_003511168.1| threonyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728] gi|290569110|gb|ADD42075.1| threonyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728] Length = 668 Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 70/440 (15%), Positives = 135/440 (30%), Gaps = 35/440 (7%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L + + G+ + P G + + +R+ Q G Sbjct: 254 LRMLEEAAKRDHRKLGAQLDLFS-FPDELGSGLPVFHPKGGIIRQEMESYLRQRQKDAGY 312 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 ++ P + +L++ SG Y M + + + I+RS +SYR Sbjct: 313 ELVNTPHITKENLFLTSGHLPYYADSMFPPMEFEGAEYYLKSMNCPMHNLIYRSRGRSYR 372 Query: 127 NLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP + +R E G+ R R M DA+ + T E + L + Sbjct: 373 ELPLRLSEFGSVYRYEKSGVVHGLTRVRGLTMDDAHIYC-TEEQRDEELKSLLKFVLELL 431 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 GL + + + + ++ Sbjct: 432 RDYGLDDFYLELSTRGDSDKF---------------IGDPKDWEDATETLRRVAEESGLE 476 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 A Y + + D++ ++S I+ F +YS Sbjct: 477 LVPDPGGAAFYGPKI---SVQAKDAIGRTWQMSTIQIDFNQPARFELEYS-------AAD 526 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 + V + G++ V+ + G W V I + Sbjct: 527 GTRKQPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQAVGIPI------RDENVPYL 580 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 ++ A+L G D +++ + A L P V+ G V ++R Sbjct: 581 DEFVAKLRAEGIRAEVDTSDDRMQKKVRNAQLQKIPFMVLAGDTDQEAGTVSFRYRDGSQ 640 Query: 426 REDMSLEEVINYASHRFSNN 445 R + LEE + + + + Sbjct: 641 RNGVPLEEAVAHVTDVVRSR 660 >gi|68249330|ref|YP_248442.1| prolyl-tRNA synthetase [Haemophilus influenzae 86-028NP] gi|229844600|ref|ZP_04464739.1| prolyl-tRNA synthetase [Haemophilus influenzae 6P18H1] gi|81336245|sp|Q4QMG5|SYP_HAEI8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|68057529|gb|AAX87782.1| prolyl-tRNA synthetase [Haemophilus influenzae 86-028NP] gi|229812314|gb|EEP48004.1| prolyl-tRNA synthetase [Haemophilus influenzae 6P18H1] Length = 572 Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 123/243 (50%), Positives = 160/243 (65%), Gaps = 1/243 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V ++REE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V DF E + Sbjct: 181 YSNIFRRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDFAANIELAEAI 239 Query: 241 DII 243 I Sbjct: 240 AIG 242 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 70/188 (37%), Positives = 106/188 (56%), Gaps = 4/188 (2%) Query: 261 DVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P+ K RGIEVGHIF G KYS M AT +G DGK + MG YG Sbjct: 384 DLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGKKYSEAMKATVQGEDGKPLVMTMGCYG 443 Query: 319 IGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKVG 376 IG RVVA+ IE HD + I D +APF ++++ + + + E++Y L G Sbjct: 444 IGVTRVVASAIEQHHDDRGIIWPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQG 503 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV +DD E+ G FA +L+G P V++G K + + ++E K+R TG +E +S +++++ Sbjct: 504 VDVIFDDRKERPGVMFADMELIGIPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLS 563 Query: 437 YASHRFSN 444 + + N Sbjct: 564 VLNEKLGN 571 >gi|323466103|gb|ADX69790.1| Threonyl-tRNA synthetase 1 [Lactobacillus helveticus H10] Length = 661 Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 155/441 (35%), Gaps = 36/441 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + RD L L + + G+ W+P G V I + + G Sbjct: 249 RRQEIKERDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQ 306 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYR 126 + P L + D + SG + Y +M D D M P + IF+ HI+SYR Sbjct: 307 HVYTPVLMNLDAYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIFKHHIRSYR 366 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ + R E G+ R RE + D ++F + + K+ + ++ Sbjct: 367 DLPLRVAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQTE-FAKILKLIMDVY 425 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + R + F + + + DD+ Sbjct: 426 KDFDITDYYFRLS-------------YRDPKNTDKYFANDEMWEKSQKMLKGAMDDLGLD 472 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y D+ + +L ++ +S ++ F ++ T+ G Sbjct: 473 YVEAEGEAAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPDRF----GLTYVGK 521 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG++H + +G M A + + G W + I +++ + Sbjct: 522 DGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLA-----PVQAEIIPVNNEAHGEY 576 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 EK+ A L+K G V DD E++G + + P +++G + + KV ++ T Sbjct: 577 AEKVRAELAKRGFRVEVDDRNEKMGYKIRESQTQKVPYTLVLGDEEMKSGKVNVRCYGTD 636 Query: 425 IREDMSLEEVINYASHRFSNN 445 SL++ IN + Sbjct: 637 EEISKSLDDFINEIDADVKSY 657 >gi|296114661|ref|ZP_06833313.1| threonyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] gi|295978757|gb|EFG85483.1| threonyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] Length = 603 Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 78/434 (17%), Positives = 141/434 (32%), Gaps = 40/434 (9%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + RD ++ L + G W P G + A +R Q +E Sbjct: 196 RQEEAARRDHRRLGREMDLF--HFQPEAPGAVFWHPNGWTLFQTLLAYLRARQQAENYVE 253 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 ++ P + LW SG ++ +G+ M + + P + +FR +KSYR+L Sbjct: 254 INTPDIMDLSLWQASGHWEKFGENMFT-TETEGRTYALKPMNCPGGVQVFRHGLKSYRDL 312 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P + R E G+MR R F DA+ F TPE + ++ L I+ Sbjct: 313 PLRMAEFGKVHRFEPSGALHGLMRVRAFTQDDAHIFC-TPEQMEAETQRICHLVLSIYKD 371 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 G + ++ P S E D + + + Sbjct: 372 FGFDDVRIKFSDRPEKRVGSDE-----------------IWDRSEEALRRGVEASGLSYT 414 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 A Y + L D++ + + +++ A + GADG Sbjct: 415 RNPGEGAFYGPKLEF---VLRDAIGRDWQCGTVQVDLNLPQRLD--------AHYIGADG 463 Query: 308 KDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 H + G++ ++ H G W V ++ + + Sbjct: 464 DKHPPVMLHRALFGSLERFIGILLEHHAGHLPFWLAPVQVVVATIT------AAADNYAD 517 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + L + G V D E+I + L P+ +IVG K V I+ + Sbjct: 518 DLIKALRQRGVRVVPDLRNEKIAYKVREHSLAKVPVLLIVGKKEAEAGTVSIREYGSPDT 577 Query: 427 EDMSLEEVINYASH 440 ++ E I+ + Sbjct: 578 PTIATETAIDLLAS 591 >gi|222528807|ref|YP_002572689.1| threonyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725] gi|222455654|gb|ACM59916.1| threonyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725] Length = 647 Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 160/443 (36%), Gaps = 33/443 (7%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L + T +G+ +P G K L + + +E+ + Sbjct: 233 EYLKKLEEAKKRDHNRIGRELEIFTT-SEVVGQGLPLLMPKGAKILQILQRFVEDEEEKR 291 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + +DL+ SG +D Y M + + ++ + P I+ S +S Sbjct: 292 GYLLTKTPYMAKSDLYKISGHWDHYRDGMFVIEEDENEVLALRPMTCPFQFLIYNSKQRS 351 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + + FR+E G++R R+F + DA+ P+ + + + Sbjct: 352 YRDLPIRYSETSTLFRNESSGEMHGLIRVRQFTLSDAHIICR-PDQVEEEFKGVLDLIQY 410 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I LG I D+ + F + + + + + D + Sbjct: 411 IMKILG------------IENDIWYRFSRWDPNNKEKYIDNPEAWEKTENDMKNILDKLG 458 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y D+ + ++ + + I+ + T+ Sbjct: 459 INYKEAKGEAAFYGPKLDIQFKNVY---GKEDTIITIQIDFAL--------AERFDMTYV 507 Query: 304 GADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG+ + IG A++ + +P +AP +I +I + + Sbjct: 508 DRDGQKKRPIIIHRSSIGCYERTLAMLI---EKYNGAFPLWLAPVQIRVIPVSDN---FN 561 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + + + L + G V D E +G + A L P VIVG K ++ V ++ R Sbjct: 562 EYAKNVARILKENGFRVEEDYRSETVGYKIRDAQLQKIPYMVIVGEKEQKENTVAVRDRK 621 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 G ++E+ I + Sbjct: 622 KGDLGSFTIEDFIAMVKEKVDKK 644 >gi|19704979|ref|NP_602474.1| prolyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|81848323|sp|Q8RIE2|SYP_FUSNN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|19712883|gb|AAL93773.1| Prolyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 567 Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 120/251 (47%), Positives = 164/251 (65%), Gaps = 1/251 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEIASHKLMLR GMI + + GIY++LPLG + + + I+REE Sbjct: 1 MRFSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLASGIYAYLPLGYRTIKKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR+D G EMLRL DR+++ + PT EE++T I RS Sbjct: 61 MDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKDRHERDFVLSPTQEEMITAIIRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ KFRDE RPRFG+MR REF MKDAYSF + E + M + Sbjct: 121 DISSYKSLPINLYHIQTKFRDERRPRFGLMRGREFTMKDAYSFHTSQESLDEEFLNMRDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S ++ E + Sbjct: 181 YTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYSD-GSEYAANIEKAVSE 239 Query: 241 DIISLNSIVEQ 251 I +++ Sbjct: 240 LINPPKEELKE 250 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 74/184 (40%), Positives = 102/184 (55%), Gaps = 2/184 (1%) Query: 261 DVHNEKLFDSLP-ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 D+ ++ D+ K SARGIE G IF G KYS M+AT+ GK ++ MG YGI Sbjct: 383 DIRKVRVGDNCITGGKLHSARGIECGQIFKLGDKYSKAMNATYLDEKGKTQFMLMGCYGI 442 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G R +AA IE ++D GIIWP S+AP+ + +I ++V EKIY L + DV Sbjct: 443 GVTRTMAASIEQNNDENGIIWPVSIAPYIVDVIPANIKNEVQVSLAEKIYNELQEEKIDV 502 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 DD E+ G +F ADL+GFP +V+VG + + VE+K R TG ++S EVI Sbjct: 503 MLDDRDEKPGFKFKDADLIGFPFKVVVGKR-ADEGIVELKIRRTGETLEVSQNEVIAKIK 561 Query: 440 HRFS 443 Sbjct: 562 ELMR 565 >gi|145628390|ref|ZP_01784191.1| prolyl-tRNA synthetase [Haemophilus influenzae 22.1-21] gi|145638474|ref|ZP_01794084.1| prolyl-tRNA synthetase [Haemophilus influenzae PittII] gi|144980165|gb|EDJ89824.1| prolyl-tRNA synthetase [Haemophilus influenzae 22.1-21] gi|145272803|gb|EDK12710.1| prolyl-tRNA synthetase [Haemophilus influenzae PittII] gi|309751606|gb|ADO81590.1| Prolyl-tRNA synthetase [Haemophilus influenzae R2866] gi|309973773|gb|ADO96974.1| Prolyl-tRNA synthetase [Haemophilus influenzae R2846] Length = 572 Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 123/243 (50%), Positives = 161/243 (66%), Gaps = 1/243 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G + L V ++REE Sbjct: 1 MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LW ESGR+D YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF+RLGL ++A++G IGG SHEF VLA +GE V DF E + Sbjct: 181 YSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDFAANIELAEAI 239 Query: 241 DII 243 I Sbjct: 240 AIG 242 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 70/189 (37%), Positives = 106/189 (56%), Gaps = 4/189 (2%) Query: 261 DVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N D P+ K RGIEVGHIF G KYS M AT +G DGK + MG YG Sbjct: 384 DLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGKKYSEAMKATVQGEDGKPLVMTMGCYG 443 Query: 319 IGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKVG 376 IG RVVA+ IE HD + I D +APF ++++ + + + E++Y L G Sbjct: 444 IGVTRVVASAIEQHHDERGIIWPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQG 503 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV +DD E+ G FA +L+G P V++G K + + ++E K+R TG +E +S +++++ Sbjct: 504 VDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLENGEIEYKNRRTGEKEMISKDQLLS 563 Query: 437 YASHRFSNN 445 + + N Sbjct: 564 VLNEKLGNR 572 >gi|300087925|ref|YP_003758447.1| threonyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527658|gb|ADJ26126.1| threonyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 584 Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 72/444 (16%), Positives = 147/444 (33%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD + +L L G+ + P + V R+ Sbjct: 170 EYLTSLAEAEARDHRRINKQLNLFVT-PEDVGGGLVIYGPKAGRIRTTVEEFWRKAHYDH 228 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + ++LW SG +Y M D + + P + ++S ++S Sbjct: 229 GYELLYTPHIGRSNLWETSGHLQNYRDIMYSPMDIDGQDYYVKPMNCPFHILFYKSQMRS 288 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + ++ +R E G++R R F DA+ TPE + +++ Sbjct: 289 YRDLPLRWAELGTVYRYERSGVLHGLLRVRGFTQDDAHIIC-TPEQIETEIDEVLRFSFE 347 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G + + + P + + + D Sbjct: 348 MWRTFGFTDLKLFLATRP-----------------EKAIGTDLQWQQASDALRRVMDARG 390 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 S+ E A Y D+ K+ D L +++ + F ++ + + Sbjct: 391 LEYSLDEGGGAFYGPKIDI---KVRDVLGREWQMTTIQFD----FNLPERFDMV----YT 439 Query: 304 GADGKDH-YVQMGSYGIGAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DG++H + +G+ R +IE + Sbjct: 440 GQDGQEHRPYMVHRALLGSWERFFGLLIEHYGGAFPVWLHPEQVAVLPIA-------DRH 492 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + ++I A+L K G V DD E + + A L P V++G K + + ++ R Sbjct: 493 LEYAQEITAKLKKAGVRVALDDRSETVNMKIRQAQLDKIPYIVVIGDKELEKGTLAVRLR 552 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + + + + Sbjct: 553 TGQQKFGVPPNDFVTLIRQVIEER 576 >gi|241889888|ref|ZP_04777186.1| threonyl-tRNA synthetase [Gemella haemolysans ATCC 10379] gi|241863510|gb|EER67894.1| threonyl-tRNA synthetase [Gemella haemolysans ATCC 10379] Length = 647 Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 157/444 (35%), Gaps = 35/444 (7%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 ++ + + + RD +L + T + G+ WLP G + I +++ Sbjct: 230 QHLVRLQEARERDHRKLGKELGIFTT-SQKVGAGLPLWLPNGATIRRTIERYIVDKEVEL 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + S DL++ SG ++ Y ++M + + + M+ P + ++++ S Sbjct: 289 GYDHVYTPIMGSKDLYITSGHWEHYQEDMFPPMEMDHETMVLRPMNCPHHMMVYKNERHS 348 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR LP ++ + R E ++ + + + P+ K + Sbjct: 349 YRELPIRIAELGMMHRYEASGAVSGLQRVRGMTLNDAHIFVRPDQLKDEFKLTVGLIEEA 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDII 243 + LG+K+ R D T+ + D + D++ Sbjct: 409 YKDLGIKNFSYRLS--------------YRDPENTEKYFDDDAMWNNAQQMLKETADELG 454 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 E A Y DV E ++ + + +S ++ F ++ + Sbjct: 455 LDYVEAEGEAAFYGPKLDVQVET---AIGKQETLSTIQLD----FLLPERF----ELEYI 503 Query: 304 GADGKDHYVQMGSYGIG--AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DGK H + GI R+VA ++E + I ++ Sbjct: 504 GEDGKAHRPVVIHRGIVSTMERMVAFLLEEYKGDLPTWLSPNQVRI------IPVNNDYH 557 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++I L K G V DD E++G + A P +++G K V + V ++ Sbjct: 558 YDYSKEIMQELKKAGVKVAIDDRDEKLGYKIREAASKKIPYTLVIGDKEVENRNVNVRTF 617 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + +++ S E + Sbjct: 618 GSLNQKEESFAEFKENILREINER 641 >gi|254477067|ref|ZP_05090453.1| threonyl-tRNA synthetase [Ruegeria sp. R11] gi|214031310|gb|EEB72145.1| threonyl-tRNA synthetase [Ruegeria sp. R11] Length = 648 Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 87/445 (19%), Positives = 154/445 (34%), Gaps = 45/445 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD ++ L + + + G W P G + + +R Q+R Sbjct: 234 KAHLTMLEEAAKRDHRKLGKEMGLF--HMQEEAPGQVFWHPNGWRIYTQLQDYMRRMQDR 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIY-----GPTHEEVMTDIF 118 G +E++ P + LW +SG +D Y + M + D A P + +F Sbjct: 292 DGYVEVNTPQVVDRKLWEKSGHWDKYQENMFIVEVDEDHAREKAVNALKPMNCPCHVQVF 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F D + F + + + K Sbjct: 352 NQGLKSYRDLPLRMAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFCAEDQITSET-AKF 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +++ LG + ++ + P S E + + C DF I Sbjct: 411 IAFLSKVYADLGFHNWTIKLSTRPEKRIGSDETWDHMEQALGE-ACKAAGYDFEI----- 464 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 +E A Y + L D++ N + ++ Sbjct: 465 -----------LEGEGAFYGPKLEF---TLTDAIGRNWQCGTLQVDANLP--------ER 502 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + ATF G DG H + +G+ ++ H GK W S+ Sbjct: 503 LEATFIGQDGAKHRPVMLHRACLGSFERFIGILIEEHAGKLPFWLAPRQVVVASIT---- 558 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++ +L G D E+I + + P+ + VG++ V + V Sbjct: 559 --SEADDYVLEVVEQLKAAGVRAEADMRNEKINYKVREHSVGKVPVILAVGAREVEERTV 616 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + SLE V + Sbjct: 617 SVRRLGEKQTKVESLETVTKTLATE 641 >gi|91215264|ref|ZP_01252236.1| threonyl-tRNA synthetase [Psychroflexus torquis ATCC 700755] gi|91186869|gb|EAS73240.1| threonyl-tRNA synthetase [Psychroflexus torquis ATCC 700755] Length = 648 Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 75/436 (17%), Positives = 153/436 (35%), Gaps = 36/436 (8%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L + G+ WLP G D + +++ Q G + P Sbjct: 238 AKKRDHRKLGKELKLFA-FSQKVGLGLPLWLPKGAALRDRLEKFLKDAQENAGYQPVVSP 296 Query: 73 TLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 + +L++ SG + YG++ + ++ + + P + +I+ + SYR+LP Sbjct: 297 HIGQKELYMTSGHFQKYGEDSFQPIKTPQDGEEYLLKPMNCPHHCEIYNAQTWSYRDLPQ 356 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + + +R E G+ R R F DA+ F TPE + K+ L +F LG Sbjct: 357 RYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFC-TPEQLDEEFKKVIDLVLYVFGSLG 415 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 ++ + ++ S + + ++ IV Sbjct: 416 FENFTAQVSLRD-------------PENPSKYIGSDENWKKAESAILNAAEEKGLTYKIV 462 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 + A Y D + D+L ++ ++ +KG+D + Sbjct: 463 KGEAAFYGPKLDFM---VKDALGRQWQLGTIQVDYNLP--------ERFELEYKGSDNEM 511 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 H + G++ A++ G +W +S+ + + +K+ Sbjct: 512 HRPVMIHRAPFGSLERFIAILIEHTGGNFPLWLMPEQATILSI------SEKYENYSKKV 565 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 + L K +D+ GE +G + A++ P +IVG V + V ++ Sbjct: 566 LSLLKKHEIRATFDNRGETMGKKIREAEMNKTPYMLIVGESEVENETVSVRKHGGEDLGQ 625 Query: 429 MSLEEVINYASHRFSN 444 MS+ + + Sbjct: 626 MSITSFAEIINAQIDK 641 >gi|254360942|ref|ZP_04977088.1| proline--tRNA ligase [Mannheimia haemolytica PHL213] gi|261492183|ref|ZP_05988753.1| proline--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494250|ref|ZP_05990749.1| proline--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] gi|153092421|gb|EDN73484.1| proline--tRNA ligase [Mannheimia haemolytica PHL213] gi|261310102|gb|EEY11306.1| proline--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312163|gb|EEY13296.1| proline--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 571 Score = 236 bits (603), Expect = 5e-60, Method: Composition-based stats. Identities = 125/243 (51%), Positives = 161/243 (66%), Gaps = 1/243 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L+E P DA++ SH+LMLR GMI + G+Y+WLP G K L V IIREE Sbjct: 1 MRTSQYLFSTLKEMPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIKVLKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q A+LWVESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R Sbjct: 61 MNKGGAIEVLMPVVQPAELWVESGRWNDYGPELLRFKDRGERDFVLGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF T E + +Y+ M+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHTTQESLQETYDVMYQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL ++A++G IGG SHEF VLA +GE V DF E + Sbjct: 181 YSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVF-STESDFAANIELAEAV 239 Query: 241 DII 243 + Sbjct: 240 AVG 242 Score = 176 bits (445), Expect = 9e-42, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D ++ + +D+ N D P+ K RGIEVGHIF G KYS M Sbjct: 364 DGKHYFNVNWERDVAVPEIADLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGKKYSEAM 423 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK-GIIWPDSVAPFKISLINIKA- 356 AT +G DGK + MG YGIG RVVAA IE +D + I D +APF ++++ + Sbjct: 424 KATVQGEDGKPLVMTMGCYGIGVTRVVAAAIEQHYDDRGIIWPCDEMAPFTVAIVPMNMH 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + E++YA L G +V +DD E+ G FA +L+G P V++G K + + ++ Sbjct: 484 KSEKVQAFAEELYANLKAQGVEVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLENGEI 543 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K+R +G ++ ++ E ++ + Sbjct: 544 EYKNRRSGEKQMIAKESLLAFLKANVK 570 >gi|307297853|ref|ZP_07577659.1| prolyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2] gi|306917113|gb|EFN47495.1| prolyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2] Length = 580 Score = 236 bits (603), Expect = 5e-60, Method: Composition-based stats. Identities = 106/239 (44%), Positives = 161/239 (67%), Gaps = 2/239 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ + P L+E P DA++ S KL++R G + + + GIYS+LPLG + L + I+R+E Sbjct: 1 MRFSQLYAPTLKEAPADADLISIKLLVRGGFVRKVAAGIYSFLPLGFRVLKKIEDIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N G+ E+ +P +Q A+LW E+GR+D YG EM+R+ DR+++ GPTHEE++T + R+ Sbjct: 61 MNAIGSQEILMPIIQPAELWHETGRWDDYGPEMMRMQDRHERFFTLGPTHEEIITHLLRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP + YQI +K+RDE+RPRFG+MRSREFLMKDAYSF + +Y + + + Sbjct: 121 ELNSYKQLPVSLYQIAMKYRDEIRPRFGLMRSREFLMKDAYSFHGSWSSLDETYKQFYGA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y +I R+GL+ + + A+SG IGG+ SHEF VLAD GE+ + + E ++ Sbjct: 181 YSKILQRIGLEFLVVEADSGAIGGNESHEFNVLADYGESTLLYCDCG--YAASDEKAEY 237 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 100/196 (51%), Gaps = 7/196 (3%) Query: 259 TSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 D+ D P+ SA+GIEVGHIF GTKYS M+ G + MG Sbjct: 380 WHDLKMVTEGDPCPKCGAPMKSAKGIEVGHIFKLGTKYSEKMNGYVTDEKGNSIHYIMGC 439 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YG G R ++A++E HD GIIWP +VAPF I + + D + + ++Y LS+ G Sbjct: 440 YGWGVSRTISAIVEQLHDENGIIWPLAVAPFDIIVTAVNIKDPIVSEKSIQLYDILSEAG 499 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL----E 432 +V DD G +F ADL+G P+++ +G K ++ VE+K R ++S+ + Sbjct: 500 FEVLLDDREISPGMKFKDADLIGIPVRITLGKK-LAQGIVEVKPRTEKKPLEVSIVDGFD 558 Query: 433 EVINYASHRFSNNRPV 448 ++ SN RPV Sbjct: 559 TLLEEIKKELSNYRPV 574 >gi|228992547|ref|ZP_04152474.1| Prolyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] gi|228998595|ref|ZP_04158182.1| Prolyl-tRNA synthetase [Bacillus mycoides Rock3-17] gi|228761063|gb|EEM10022.1| Prolyl-tRNA synthetase [Bacillus mycoides Rock3-17] gi|228767181|gb|EEM15817.1| Prolyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] Length = 566 Score = 236 bits (603), Expect = 5e-60, Method: Composition-based stats. Identities = 125/267 (46%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LPLG K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPLGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P LQ+A+LW ESGR+ SYG E++R+ DRND+ G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPALQAAELWQESGRWYSYGSELMRMKDRNDREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y+ ++ + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYSGLYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+ L+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMALSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ASYAKSDEAEKALEKVATPDQKAIEEV 266 Score = 163 bits (413), Expect = 5e-38, Method: Composition-based stats. Identities = 72/190 (37%), Positives = 104/190 (54%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ RGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTIRFARGIEVGHVFKLGTRYSEAMNATFLDENGKTKPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAAV E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAVAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREVGETIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R T ++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATNESAEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LHAYIANILK 566 >gi|254719143|ref|ZP_05180954.1| threonyl-tRNA synthetase [Brucella sp. 83/13] gi|265984137|ref|ZP_06096872.1| threonyl-tRNA synthetase [Brucella sp. 83/13] gi|306838428|ref|ZP_07471273.1| threonyl-tRNA synthetase [Brucella sp. NF 2653] gi|264662729|gb|EEZ32990.1| threonyl-tRNA synthetase [Brucella sp. 83/13] gi|306406568|gb|EFM62802.1| threonyl-tRNA synthetase [Brucella sp. NF 2653] Length = 658 Score = 236 bits (603), Expect = 5e-60, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 152/445 (34%), Gaps = 40/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD ++ L + G+ W G K N+ + +R + Sbjct: 233 QAYLHMLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 291 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F + + Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRIN 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G + I ++ + P S E A++ V E Sbjct: 411 -DLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVL------------EQI 457 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I+ A Y + L D++ + ++ FG Sbjct: 458 RQQSNNIKTGILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------ 508 Query: 298 MSATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G K V + G+M ++ + G +W V ++ Sbjct: 509 --AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATIT---- 562 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + ++ A+L G V D E+I + L P+ ++ G + + V Sbjct: 563 --SDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHSLQKVPVILVCGKREAEEKTV 620 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + +E M+L+E I Sbjct: 621 NMRRLGSRDQESMTLDEAIARLCEE 645 >gi|229006095|ref|ZP_04163783.1| Prolyl-tRNA synthetase [Bacillus mycoides Rock1-4] gi|228755171|gb|EEM04528.1| Prolyl-tRNA synthetase [Bacillus mycoides Rock1-4] Length = 566 Score = 236 bits (603), Expect = 5e-60, Method: Composition-based stats. Identities = 125/267 (46%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LPLG K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPLGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P LQ+A+LW ESGR+ SYG E++R+ DRND+ G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPALQAAELWQESGRWYSYGSELMRMKDRNDREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y+ ++ + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYSGLYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+ L+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMALSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ASYAKSDEAEKALEKVATPDQKAIEEV 266 Score = 163 bits (413), Expect = 5e-38, Method: Composition-based stats. Identities = 72/190 (37%), Positives = 104/190 (54%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ RGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTIRFARGIEVGHVFKLGTRYSEAMNATFLDENGKTKPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAAV E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAVAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREVGETIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R T ++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATNESAEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LHAYIANILK 566 >gi|328861737|gb|EGG10840.1| hypothetical protein MELLADRAFT_42095 [Melampsora larici-populina 98AG31] Length = 486 Score = 236 bits (603), Expect = 5e-60, Method: Composition-based stats. Identities = 151/478 (31%), Positives = 249/478 (52%), Gaps = 57/478 (11%) Query: 3 RSKYFLPILQ-ENPRDAEI--ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 +S + P ++ + D I H L+LR G + Q S GI+++LP + L V I+RE Sbjct: 32 QSNRYSPTIKTQAQSDTSISSPGHHLLLRAGFLRQSSTGIWNFLPNAIRVLKKVEDIVRE 91 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 E R GA E+S+ LQ++ LW SGR+++ GKE+ RL+DR D ++ PTHEE +T + + Sbjct: 92 EMERIGASEVSLSHLQTSSLWKASGRWNTAGKELFRLSDRKDAHLLLAPTHEEEITQLVK 151 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 + S + LP + I K+RDELRPR G++RSREF+MKD Y+FDL + +Y+ + Sbjct: 152 LDVNSSKQLPVRLFHIGRKYRDELRPRAGLLRSREFIMKDLYTFDLDRTKALETYSAVQG 211 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 +Y +I R+G+ + A+SG IGG SHE+ + +GE V D+ E Sbjct: 212 AYEKILKRIGIPFVVAEADSGAIGGSQSHEYQFESPSGEDTVIKCTKC-DYIANVELAK- 269 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + SDV+ + L S++ IEV H FY GTKYS +S Sbjct: 270 -------------SVLVPPLSDVNALRCRSPLG-----SSKAIEVAHTFYLGTKYSSSLS 311 Query: 300 ATFKGAD-----GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS-LIN 353 AT+K +D K++ ++MG +GIG R++ A+ E SH G+ WP +VAPFK+ +I Sbjct: 312 ATYKISDPKTGLQKENPLEMGCFGIGISRLMGAIAECSHTETGLRWPINVAPFKVCIIIP 371 Query: 354 IKAHDQVCRDACEKIYA--------------RLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 ++ +D D + + L +V DD ++IG + ADL+G Sbjct: 372 MQENDAGSSDLIKSVAQIIGREVESIKTKVGELKG---EVLIDDRIQRIGWKLMDADLVG 428 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTG---IREDMSLEE--------VINYASHRFSNNR 446 +P+ +++G++++ + +EI+ G E++ L + + + + ++ Sbjct: 429 YPILIVLGNRWIKNQVIEIRDVKNGKVIELENVGLVDGKLVDQGRLSDTIGSLINESK 486 >gi|291398822|ref|XP_002716008.1| PREDICTED: prolyl-tRNA synthetase (mitochondrial)(putative) [Oryctolagus cuniculus] Length = 478 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 151/455 (33%), Positives = 231/455 (50%), Gaps = 44/455 (9%) Query: 3 RSKYFLPI-LQENPR--------DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNV 53 S+ F P L+E+ + S +LML+ G+I S G Y LP +AL+ + Sbjct: 45 LSRIFQPQNLREDQALSLESRSGELTCKSQRLMLQVGLILPASPGCYHLLPYTVRALEKL 104 Query: 54 NAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEV 113 +I +E G ++S+P+L A+LW + R+D GKE+LRL DR+ K GPTHEEV Sbjct: 105 VRLIDQEMQAVGGQKVSLPSLSPAELWRATQRWDLMGKELLRLQDRHGKEYCLGPTHEEV 164 Query: 114 MT-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKH 172 +T + SY+ LPF YQ+ KFRDE RPRFG++R REF MKD Y+FD +PE ++ Sbjct: 165 VTALVASQKNLSYKQLPFLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSPEAARQ 224 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 +Y + +Y +F RLGL+ I +A+ G IGG +SHEF + + GE Q+ Sbjct: 225 TYGLVCDAYCSLFSRLGLQVIKAQADVGSIGGTMSHEFQLPVEVGEDQLAVCPSC----- 279 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 A + + + + + RGIEVGH FY GT Sbjct: 280 ---------------------GFSANVETLDSSQTNCPVCQGPLTETRGIEVGHTFYLGT 318 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 KYS A F A+GK +MG YG+G R++AA IE + WP +AP+++ LI Sbjct: 319 KYSSIFRAQFTNAEGKPCLAEMGCYGLGVSRILAAAIEVLATEDSVRWPGLLAPYQVCLI 378 Query: 353 NIKA--HDQVCRDACEKIYARLSKV----GCDVFWDDMGE-QIGSQFAVADLLGFPLQVI 405 K + + E++Y +++ ++ DD IGS+ AD LG+P V+ Sbjct: 379 PPKKGSKEAAATELTERLYDHIAEAVPQLHGELVLDDRTHLTIGSRLKDADKLGYPFVVV 438 Query: 406 VGSKFVSDSK-VEIKHRLTGIREDMSLEEVINYAS 439 G + + + E+ + TG + ++ E V++ + Sbjct: 439 AGKRALEEPACFEVWCQNTGEQLFLTREGVLDLLT 473 >gi|326318382|ref|YP_004236054.1| prolyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375218|gb|ADX47487.1| prolyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 581 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 116/237 (48%), Positives = 157/237 (66%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ SHKLM R G+I + GIY+++P+G + + V AI+REE Sbjct: 1 MKASQFFVSTLKEAPADAEVVSHKLMTRAGLIKKLGAGIYNYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+++P +Q A+ W E+GR+D G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 61 MNRAGAVEVTMPVVQPAEFWQETGRFDKMGPELLRIRDRHGRDFVVQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ KFRDE RPRFG+MR REF+MKDAYSFD +K SY M + Sbjct: 121 ELRSYKQLPKNLYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDQAAAKASYQVMAQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R GL + A+SG IGGDLS EF V+A TGE + D+ E Sbjct: 181 YRRIFDRFGLTYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYCPQ-SDYAANMEKA 236 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 75/189 (39%), Positives = 109/189 (57%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ K RGIEVGH+FY GTKYS M+ATF G DGK + +MG Sbjct: 392 VVADLRNVVAGDPSPDGKGALAIERGIEVGHVFYLGTKYSRAMNATFLGEDGKPAFFEMG 451 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSK 374 YGIG R+ AA IE +HD +GIIWPD++APF + + I + R A EK++A L Sbjct: 452 CYGIGITRLPAAAIEQNHDERGIIWPDAIAPFTVVVCPIGMDRSEEVRAAAEKLHADLLA 511 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV DD GE+ G+ FA +L+G P +V++ + + + +VE +HR ++ ++ Sbjct: 512 AGVDVILDDRGERPGAMFADWELIGVPHRVVLSDRGLKEGQVEYQHRRDAAATKVASADI 571 Query: 435 INYASHRFS 443 + R Sbjct: 572 FAFIKDRIK 580 >gi|256159790|ref|ZP_05457533.1| threonyl-tRNA synthetase [Brucella ceti M490/95/1] gi|256255048|ref|ZP_05460584.1| threonyl-tRNA synthetase [Brucella ceti B1/94] gi|261222239|ref|ZP_05936520.1| threonyl-tRNA synthetase [Brucella ceti B1/94] gi|265998203|ref|ZP_06110760.1| threonyl-tRNA synthetase [Brucella ceti M490/95/1] gi|260920823|gb|EEX87476.1| threonyl-tRNA synthetase [Brucella ceti B1/94] gi|262552671|gb|EEZ08661.1| threonyl-tRNA synthetase [Brucella ceti M490/95/1] Length = 658 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 81/445 (18%), Positives = 151/445 (33%), Gaps = 40/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD ++ L + G+ W G K N+ + +R + Sbjct: 233 QAYLHMLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 291 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F + + Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRIN 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G + I ++ + P S E A++ V E Sbjct: 411 -DLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVL------------EQI 457 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I+ A Y + L D++ + ++ F Sbjct: 458 RQQSNNIKTGILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVD----FNLP----KR 506 Query: 298 MSATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G K V + G+M ++ + G +W V ++ Sbjct: 507 FGAFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATIT---- 562 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + ++ A+L G V D E+I + L P+ ++ G + + V Sbjct: 563 --SDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHSLQKVPVILVCGKREAEEKTV 620 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + +E M+L+E I Sbjct: 621 NMRRLGSRDQESMTLDEAIARLCEE 645 >gi|159043329|ref|YP_001532123.1| threonyl-tRNA synthetase [Dinoroseobacter shibae DFL 12] gi|189083606|sp|A8LQX9|SYT_DINSH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157911089|gb|ABV92522.1| threonyl-tRNA synthetase [Dinoroseobacter shibae DFL 12] Length = 654 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 149/442 (33%), Gaps = 45/442 (10%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD ++ L + + + G W P G + +R Q G Sbjct: 237 LHMLEEAAKRDHRKLGREMNLF--HMQEEAPGQVFWHPNGWTVYTTLQDYMRRRQRENGY 294 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIY-----GPTHEEVMTDIFRSH 121 +E++ P + LW SG +D Y + M + + A P + ++ Sbjct: 295 VEVNTPQVVDRKLWEASGHWDKYQENMFIVEVDEEHAREKAINALKPMNCPCHVQVYNQG 354 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR+LP + R E G+MR R F DA+ F T + + + Sbjct: 355 LKSYRDLPLRMAEFGACNRYEPSGALHGLMRVRGFTQDDAHIFC-TEDQIQDETARFIRM 413 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 I+ LG +S ++ + P S D + Sbjct: 414 LSTIYRDLGFESFDIKFSTRPEVR-----------------AGSDAVWDKAEAALEAAIR 456 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + A Y D KL D++ ++ + F + + A Sbjct: 457 TVTDDFELDPGEGAFYGPKLDF---KLTDAIGREWQLGTFQAD----FVLPER----LDA 505 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 T+ G DG H + +G+ ++ + GK W S+I Sbjct: 506 TYIGEDGAKHRPVMLHRAILGSFERFLGILIENFAGKLPFWLAPRQVVVASII------S 559 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ A L++ G D E+I + + P+ + VG + + + V ++ Sbjct: 560 EADDYVREVVAALTRAGIRAEADIRNEKINYKVREHSVGKVPVILAVGRREMEERTVTLR 619 Query: 420 HRLTGIREDMSLEEVINYASHR 441 + L+ ++ + Sbjct: 620 RLGEKQTSVVGLDALVADLAAE 641 >gi|23501949|ref|NP_698076.1| threonyl-tRNA synthetase [Brucella suis 1330] gi|161619021|ref|YP_001592908.1| threonyl-tRNA synthetase [Brucella canis ATCC 23365] gi|163843337|ref|YP_001627741.1| threonyl-tRNA synthetase [Brucella suis ATCC 23445] gi|254704361|ref|ZP_05166189.1| threonyl-tRNA synthetase [Brucella suis bv. 3 str. 686] gi|254710151|ref|ZP_05171962.1| threonyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|254714150|ref|ZP_05175961.1| threonyl-tRNA synthetase [Brucella ceti M644/93/1] gi|254716792|ref|ZP_05178603.1| threonyl-tRNA synthetase [Brucella ceti M13/05/1] gi|256031646|ref|ZP_05445260.1| threonyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] gi|256061156|ref|ZP_05451310.1| threonyl-tRNA synthetase [Brucella neotomae 5K33] gi|256369496|ref|YP_003107004.1| threonyl-tRNA synthetase [Brucella microti CCM 4915] gi|260168776|ref|ZP_05755587.1| threonyl-tRNA synthetase [Brucella sp. F5/99] gi|260566393|ref|ZP_05836863.1| threonyl-tRNA synthetase [Brucella suis bv. 4 str. 40] gi|261218590|ref|ZP_05932871.1| threonyl-tRNA synthetase [Brucella ceti M13/05/1] gi|261317705|ref|ZP_05956902.1| threonyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|261321913|ref|ZP_05961110.1| threonyl-tRNA synthetase [Brucella ceti M644/93/1] gi|261325162|ref|ZP_05964359.1| threonyl-tRNA synthetase [Brucella neotomae 5K33] gi|261755033|ref|ZP_05998742.1| threonyl-tRNA synthetase [Brucella suis bv. 3 str. 686] gi|261758257|ref|ZP_06001966.1| threonyl-tRNA synthetase [Brucella sp. F5/99] gi|265988738|ref|ZP_06101295.1| threonyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] gi|38258386|sp|Q8G0L8|SYT_BRUSU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189083599|sp|A9M582|SYT_BRUC2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189083600|sp|B0CGM0|SYT_BRUSI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|23347895|gb|AAN29991.1| threonyl-tRNA synthetase [Brucella suis 1330] gi|161335832|gb|ABX62137.1| threonyl-tRNA synthetase [Brucella canis ATCC 23365] gi|163674060|gb|ABY38171.1| threonyl-tRNA synthetase [Brucella suis ATCC 23445] gi|255999656|gb|ACU48055.1| threonyl-tRNA synthetase [Brucella microti CCM 4915] gi|260155911|gb|EEW90991.1| threonyl-tRNA synthetase [Brucella suis bv. 4 str. 40] gi|260923679|gb|EEX90247.1| threonyl-tRNA synthetase [Brucella ceti M13/05/1] gi|261294603|gb|EEX98099.1| threonyl-tRNA synthetase [Brucella ceti M644/93/1] gi|261296928|gb|EEY00425.1| threonyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|261301142|gb|EEY04639.1| threonyl-tRNA synthetase [Brucella neotomae 5K33] gi|261738241|gb|EEY26237.1| threonyl-tRNA synthetase [Brucella sp. F5/99] gi|261744786|gb|EEY32712.1| threonyl-tRNA synthetase [Brucella suis bv. 3 str. 686] gi|264660935|gb|EEZ31196.1| threonyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] Length = 658 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 152/445 (34%), Gaps = 40/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD ++ L + G+ W G K N+ + +R + Sbjct: 233 QAYLHMLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 291 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F + + Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRIN 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G + I ++ + P S E A++ V E Sbjct: 411 -DLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVL------------EQI 457 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I+ A Y + L D++ + ++ FG Sbjct: 458 RQQSNNIKTGILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------ 508 Query: 298 MSATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G K V + G+M ++ + G +W V ++ Sbjct: 509 --AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATIT---- 562 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + ++ A+L G V D E+I + L P+ ++ G + + V Sbjct: 563 --SDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHSLQKVPVILVCGKREAEEKTV 620 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + +E M+L+E I Sbjct: 621 NMRRLGSRDQESMTLDEAIARLCEE 645 >gi|72162507|ref|YP_290164.1| threonyl-tRNA synthetase [Thermobifida fusca YX] gi|123747139|sp|Q47N28|SYT_THEFY RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|71916239|gb|AAZ56141.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Thermobifida fusca YX] Length = 659 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 70/447 (15%), Positives = 134/447 (29%), Gaps = 37/447 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD +L L + + G+ + P G + R Sbjct: 247 KSYLTMLEEAAKRDHRKLGVELDLFS-FPDELGSGLAVFHPKGGVVRKVMEEYSRRRHEE 305 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G ++ P + A L+ SG +Y M + + I+RS + Sbjct: 306 AGYQFVNTPHISKAGLFETSGHLPNYADAMFPPIQFEGADYYLKAMNCPMHNLIYRSRGR 365 Query: 124 SYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ +R E G+ R+R F DA+ + + +++ L Sbjct: 366 SYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTKEQMPDEL-DRLLTFVL 424 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + GL + + E + Sbjct: 425 DLLRDYGLSDFYLELSTRDDSPKFIGE---------------PQEWEEATEILRQAAQKQ 469 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + + D++ ++S ++ + Sbjct: 470 NLELVMDAGGAAYYGPKI---SVQAKDAIGRTWQMSTIQVDFQQP--------KRFELEY 518 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + ADG + G++ AV+ + G W V I + Sbjct: 519 QAADGSRQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVVGIPIA------SEH 572 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E + RL + G V D +++ + A P ++ G VS V ++R Sbjct: 573 VPYLEDVARRLREHGVRVEVDASDDRMQKKIRNAQKQKIPFMLLAGDNDVSKGAVSFRYR 632 Query: 422 LTGIREDMSLEEVINYASHRFSNNRPV 448 + +++ I R V Sbjct: 633 DGSQNNGVPIDKAIEEILTVIRERRQV 659 >gi|308068985|ref|YP_003870590.1| Prolyl-tRNA synthetase class II (Proline--tRNA ligase class II) [Paenibacillus polymyxa E681] gi|305858264|gb|ADM70052.1| Prolyl-tRNA synthetase class II (Proline--tRNA ligase class II) [Paenibacillus polymyxa E681] Length = 579 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 126/276 (45%), Positives = 173/276 (62%), Gaps = 8/276 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ L L+E P +AE+ SH+LMLR G I Q + G+Y+++PLG++ L V I+R+E Sbjct: 1 MRQSQLLLTTLREAPAEAEVISHQLMLRGGFIRQLAAGMYTYMPLGRRVLRKVEQIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P LQ +LW ESGRYD YG E++RL DR+D+ GPTHEEV+T + R+ Sbjct: 61 MDRAGAGELLMPVLQPTELWQESGRYDVYGPELMRLQDRHDREFALGPTHEEVITSLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP T YQIQ KFRDE RPRFG++RSREFLMKDAYSFD EG H+Y MF + Sbjct: 121 EVNSYRKLPVTLYQIQTKFRDERRPRFGLLRSREFLMKDAYSFDAHWEGLDHTYWTMFRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDL-SHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y RIF R GL + A++G IGG+ +HEF+ LAD GE + ++ E Sbjct: 181 YHRIFTRCGLYFRAVEADAGAIGGEGETHEFMALADIGEDTIVACTCC-EYAANLEKAVA 239 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 + AP + ++ + FD++ K Sbjct: 240 RSTGKIE------IAPVSDENEHVSHPSFDTVKMEK 269 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 66/186 (35%), Positives = 106/186 (56%), Gaps = 4/186 (2%) Query: 259 TSDVHNEKLFDSLP---ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P E + GIE+GH+F GTKYS + ATF A G + + MG Sbjct: 394 VADLRNVIEGDRCPQCNEGELKLHGGIEIGHVFKLGTKYSEKLGATFLDAFGTEQAMIMG 453 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R+++A++E +HD G+IWP ++APF++ +I I D++ EK+Y +L Sbjct: 454 CYGIGVSRILSAIVEQNHDQNGMIWPYALAPFQVHIIPISVKDRLQMQIAEKLYNQLQDR 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G +F +DL+G P++++VG K KVE+ R + +E + +E++ Sbjct: 514 GVEVLLDDREERPGVKFKDSDLVGIPVRIVVG-KDAEHGKVELVERKSCNKETIHIEDIE 572 Query: 436 NYASHR 441 Sbjct: 573 RRILEL 578 >gi|120612314|ref|YP_971992.1| prolyl-tRNA synthetase [Acidovorax citrulli AAC00-1] gi|152074741|sp|A1TTD0|SYP_ACIAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|120590778|gb|ABM34218.1| prolyl-tRNA synthetase [Acidovorax citrulli AAC00-1] Length = 581 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 116/237 (48%), Positives = 157/237 (66%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ SHKLM R G+I + GIY+++P+G + + V AI+REE Sbjct: 1 MKASQFFVSTLKEAPADAEVVSHKLMTRAGLIKKLGAGIYNYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+++P +Q A+ W E+GR+D G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 61 MNRAGAVEVTMPVVQPAEYWQETGRFDKMGPELLRIRDRHGRDFVVQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ KFRDE RPRFG+MR REF+MKDAYSFD +K SY M + Sbjct: 121 ELRSYKQLPKNLYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDQAAAKASYQVMAQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R GL + A+SG IGGDLS EF V+A TGE + D+ E Sbjct: 181 YRRIFDRFGLTYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYCPQ-SDYAANMEKA 236 Score = 164 bits (415), Expect = 3e-38, Method: Composition-based stats. Identities = 75/189 (39%), Positives = 108/189 (57%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ K RGIEVGH+FY GTKYS M+ATF G DGK + +MG Sbjct: 392 VVADLRNVVAGDPSPDGKGTLAIERGIEVGHVFYLGTKYSRAMNATFLGEDGKPAFFEMG 451 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSK 374 YGIG R+ AA IE +HD +GIIWPD++APF + + I R A EK++A L Sbjct: 452 CYGIGITRLPAAAIEQNHDERGIIWPDAIAPFTVVVCPIGMDRSDEVRAAAEKLHADLLT 511 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV DD GE+ G+ FA +L+G P +V++ + + + +VE +HR ++ ++ Sbjct: 512 AGVDVILDDRGERPGAMFADWELIGVPHRVVLSDRGLKEGQVEYQHRRDAAATKVASADI 571 Query: 435 INYASHRFS 443 + R Sbjct: 572 FAFIKDRIK 580 >gi|160914239|ref|ZP_02076460.1| hypothetical protein EUBDOL_00249 [Eubacterium dolichum DSM 3991] gi|158433866|gb|EDP12155.1| hypothetical protein EUBDOL_00249 [Eubacterium dolichum DSM 3991] Length = 610 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 72/436 (16%), Positives = 139/436 (31%), Gaps = 39/436 (8%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD + +L + M+ +++ G+ +LP G + + EE + + P Sbjct: 211 AKKRDHKKLGRELGIF--MMSEYAPGMPFFLPNGMILRNILENFWYEEHTKEHYQFIKTP 268 Query: 73 TLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + S +LW SG +D+Y + M +D+ P + +++ + SY++ P Sbjct: 269 IMMSKELWETSGHWDNYKENMYISM-VDDREFAIKPMNCPGALLAYKAGLHSYKDFPLRM 327 Query: 133 YQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 ++ R E G+ R R F DA+ F + + RI+ LGL Sbjct: 328 GELGQVHRHEASGALNGLFRVRTFTQDDAHIFMRPDQIESE-VMSLISFIDRIYASLGLS 386 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ 251 + P E + + + + Sbjct: 387 YRI-ELSTRP----------------EEKYIGDLAIWEASEAALAAACKHAGKDYKVNPG 429 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD-H 310 A Y D H + DSL + +++ T+ +DG Sbjct: 430 DGAFYGPKLDFH---IKDSLGREWQCGTIQLDMNLP--------ERFDLTYVESDGSKAR 478 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V + G++ ++ G W ++ + H + EK+ Sbjct: 479 PVMLHRVIFGSIERFIGILIEHFAGHFPTWLA-----PQQIMVVPVHYEKHLSYAEKVNE 533 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L + G D E++G + A L P Q+++G + V I+ + Sbjct: 534 MLVQNGFRSKLDARNEKLGYRIREAQLAKIPYQIVLGDGEEENGTVTIRRAQGKDSTTLP 593 Query: 431 LEEVINYASHRFSNNR 446 L+ I R Sbjct: 594 LDAFIAMLKEEVEEKR 609 >gi|218710332|ref|YP_002417953.1| prolyl-tRNA synthetase [Vibrio splendidus LGP32] gi|254782926|sp|B7VIT2|SYP_VIBSL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|218323351|emb|CAV19528.1| prolyl-tRNA synthetase [Vibrio splendidus LGP32] Length = 571 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 118/277 (42%), Positives = 166/277 (59%), Gaps = 5/277 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVEILMPVVQPFELWEETGRSEKMGPELLRFTDRHSRPFVLSPTAEEVVTSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY M + Sbjct: 121 EISSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFSMMDAYSFDIDKEGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN---- 236 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAF-SSESDYAANIEKAEAL 239 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 +++ + +E P A T E+ ++ + Sbjct: 240 APTEEVAAPTQEMELVDTPNAKTIAELVEQHGLAIEK 276 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 68/190 (35%), Positives = 109/190 (57%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFD--SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A D+ N D + RGIEVGHIF G YS M+ G DGK ++M Sbjct: 382 AQVEDLRNVVEGDLSPCGQGTIQLKRGIEVGHIFQLGNTYSKAMNCNVLGPDGKSVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVA+ IE +HD GI WPD++APF+++++ + + ++A EK+YA L+ Sbjct: 442 GCYGIGVSRVVASAIEQNHDKFGITWPDALAPFQVAIVPMNMHKSERVKEAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G +V +DD E+ G F +L+G P +++G + + + E K+R TG +E ++++ Sbjct: 502 AMGIEVLFDDRKERPGVMFKDIELVGIPHTIVIGDRSMDEGNFEYKNRRTGDKEAIAMDT 561 Query: 434 VINYASHRFS 443 VI + + + Sbjct: 562 VIEHLKAQLA 571 >gi|306843943|ref|ZP_07476538.1| threonyl-tRNA synthetase [Brucella sp. BO1] gi|306275698|gb|EFM57422.1| threonyl-tRNA synthetase [Brucella sp. BO1] Length = 658 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 83/445 (18%), Positives = 153/445 (34%), Gaps = 40/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD ++ L + G+ W G K N+ + +R + Sbjct: 233 QAYLHMLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 291 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F + + Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRIN 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G + I ++ + P S E A++ V E Sbjct: 411 -DLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVL------------EQI 457 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I+ A Y + L D++ + ++ FG Sbjct: 458 RQQSNNIKTGILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------ 508 Query: 298 MSATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G K V + G+M ++ + G +W V ++ Sbjct: 509 --AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATIT---- 562 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + ++ A+L VG V D E+I + L P+ ++ G + + V Sbjct: 563 --SDADEYAKEAAAKLKAVGLQVVTDLRNEKINYKVREHSLQKVPVILVCGKREAEEKTV 620 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + +E M+L+E I Sbjct: 621 NMRRLGSRDQESMTLDEAIARLCEE 645 >gi|330823518|ref|YP_004386821.1| Prolyl-tRNA synthetase [Alicycliphilus denitrificans K601] gi|329308890|gb|AEB83305.1| Prolyl-tRNA synthetase [Alicycliphilus denitrificans K601] Length = 581 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 118/237 (49%), Positives = 160/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ SHKLM+R G+I + GIYS++P+G + + V AI+REE Sbjct: 1 MKASQFFISTLKEAPADAEVVSHKLMMRAGLIKKLGAGIYSYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E ++P +Q A+LW E+GR++ G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 61 MNRAGAVECTMPVVQPAELWQETGRFEKMGPELLRIQDRHGRDFVIQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ KFRDE RPRFG+MR REF+MKDAYSFD G+K SY M + Sbjct: 121 ELRSYKQLPRNLYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDQAGAKASYQAMAQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R GL+ + A+SG IGGDLS EF V+A TGE + D+ E Sbjct: 181 YRRIFDRFGLRYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYC-PASDYAANMEKA 236 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 76/189 (40%), Positives = 109/189 (57%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 A +D+ N D P+ K V RGIEVGH+FY TKYS M+ATF G DGK + +MG Sbjct: 392 AVADLRNVVAGDPSPDGKGVLAIERGIEVGHVFYLSTKYSKAMNATFLGEDGKPAFFEMG 451 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSK 374 YGIG R+ AA IE +HD +GIIWPD++APF + + I + R EK++ L Sbjct: 452 CYGIGITRLPAAAIEQNHDERGIIWPDAIAPFTVVICPIGMDRSEEVRAVAEKLHGELLA 511 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV DD GE+ G+ FA +L+G P ++ +G K + + +VE HR + + E+ Sbjct: 512 SGIDVILDDRGERPGAMFADWELIGVPHRITIGDKGLKEGQVEYLHRRDAGATKVGVAEI 571 Query: 435 INYASHRFS 443 + + R + Sbjct: 572 LAHVKERVA 580 >gi|319761647|ref|YP_004125584.1| prolyl-tRNA synthetase [Alicycliphilus denitrificans BC] gi|317116208|gb|ADU98696.1| prolyl-tRNA synthetase [Alicycliphilus denitrificans BC] Length = 581 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 118/237 (49%), Positives = 160/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ SHKLM+R G+I + GIYS++P+G + + V AI+REE Sbjct: 1 MKASQFFISTLKEAPADAEVVSHKLMMRAGLIKKLGAGIYSYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E ++P +Q A+LW E+GR++ G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 61 MNRAGAVECTMPVVQPAELWQETGRFEKMGPELLRIQDRHGRDFVIQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ KFRDE RPRFG+MR REF+MKDAYSFD G+K SY M + Sbjct: 121 ELRSYKQLPRNLYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDQAGAKASYQAMAQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R GL+ + A+SG IGGDLS EF V+A TGE + D+ E Sbjct: 181 YRRIFDRFGLRYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYC-PASDYAANMEKA 236 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 77/189 (40%), Positives = 110/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 A +D+ N D P+ K V RGIEVGH+FY GTKYS M+ATF G DGK + +MG Sbjct: 392 AVADLRNVVAGDPSPDGKGVLAIERGIEVGHVFYLGTKYSKAMNATFLGEDGKPAFFEMG 451 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSK 374 YGIG R+ AA IE +HD +GIIWPD++APF + + I + R EK++ L Sbjct: 452 CYGIGITRLPAAAIEQNHDERGIIWPDAIAPFTVVICPIGMDRSEEVRAVAEKLHGELLA 511 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV DD GE+ G+ FA +L+G P ++ +G K + + +VE HR + + E+ Sbjct: 512 SGIDVILDDRGERPGAMFADWELIGVPHRITIGDKGLKEGQVEYLHRRDAGATKVGVAEI 571 Query: 435 INYASHRFS 443 + + R + Sbjct: 572 LAHVKERVA 580 >gi|237742688|ref|ZP_04573169.1| prolyl-tRNA synthetase [Fusobacterium sp. 4_1_13] gi|229430336|gb|EEO40548.1| prolyl-tRNA synthetase [Fusobacterium sp. 4_1_13] Length = 567 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 120/251 (47%), Positives = 164/251 (65%), Gaps = 1/251 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEIASHKLMLR GMI + + GIY++LPLG + + + I+REE Sbjct: 1 MRFSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLASGIYAYLPLGYRTIKKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR+D G EMLRL DR+++ + PT EE++T I RS Sbjct: 61 MDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKDRHERDFVLSPTQEEMITAIVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ KFRDE RPRFG+MR REF MKDAYSF + E + M + Sbjct: 121 DISSYKSLPINLYHIQTKFRDERRPRFGLMRGREFTMKDAYSFHTSQESLDEEFLNMRNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S ++ E + Sbjct: 181 YSRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYSD-GSEYAANIEKAVSE 239 Query: 241 DIISLNSIVEQ 251 I +++ Sbjct: 240 LINPPKEELKE 250 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 73/186 (39%), Positives = 103/186 (55%), Gaps = 2/186 (1%) Query: 259 TSDVHNEKLFDSLP-ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K+ ++ K SARGIE G IF G KYS M+AT+ +GK Y+ MG Y Sbjct: 381 VADIRTAKVGENCIIGGKLHSARGIECGQIFKLGDKYSKVMNATYLDENGKTQYMLMGCY 440 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R +AA IE ++D GIIWP S+AP+ + +I ++V EKIY L + Sbjct: 441 GIGVTRTMAAAIEQNNDENGIIWPVSIAPYTVDVIPANIKNEVQVSLAEKIYNELEEEKI 500 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D DD E+ G +F ADL+GFP +++VG + + VE+K R TG ++S EVI Sbjct: 501 DAMLDDRDEKPGFKFKDADLIGFPFKIVVGKR-ADEGIVELKIRRTGETLEISQNEVIAK 559 Query: 438 ASHRFS 443 Sbjct: 560 IKELMK 565 >gi|162289255|ref|YP_522539.2| prolyl-tRNA synthetase [Rhodoferax ferrireducens T118] gi|114152240|sp|Q21YZ5|SYP_RHOFD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 580 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 120/237 (50%), Positives = 156/237 (65%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ SHKLM R GMI + GIYS +P+G + + V I+REE Sbjct: 1 MKASQFFISTLKEAPADAEVVSHKLMTRAGMIKKLGAGIYSLMPMGLRVVRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW E+GR++S G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 61 MNRAGAVELVMPVVQPAELWQETGRFESNGPELLRIKDRHGRDFVVQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE RPRFG+MR REF+MKDAYSFD +K SY M + Sbjct: 121 EIKSYKQLPKNLYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDQASAKASYQVMAAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R GL + A+SG IGGDLS EF V+A TGE + D+ E Sbjct: 181 YRRIFDRFGLTYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYC-PGSDYAANMEKA 236 Score = 162 bits (411), Expect = 7e-38, Method: Composition-based stats. Identities = 73/190 (38%), Positives = 109/190 (57%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A +D+ N D+ P+ + V RGIE+GH+FY GTKYS M+ATF +GK +++M Sbjct: 390 ALVADLRNVVAGDASPDGQGVLAIERGIEIGHVFYLGTKYSQAMNATFLDVNGKPQFMEM 449 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD-QVCRDACEKIYARLS 373 G YGIG R+ AA IE +HD +GIIWPD++APF + L I + A +K+YA L Sbjct: 450 GCYGIGITRLPAAAIEQNHDERGIIWPDALAPFTVVLCPISPERFPDVKAASDKLYAELL 509 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G DV DD GE+ G+ FA +L+G P +V +G + + +VE +HR + + Sbjct: 510 AAGVDVILDDRGERPGAMFADWELIGVPHRVTIGDRGLKAGEVEYQHRRDSAATTVGVTA 569 Query: 434 VINYASHRFS 443 + + + Sbjct: 570 IFSLLQAKLK 579 >gi|89344805|gb|ABD69008.1| prolyl-tRNA synthetase [Rhodoferax ferrireducens T118] Length = 600 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 120/237 (50%), Positives = 156/237 (65%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ SHKLM R GMI + GIYS +P+G + + V I+REE Sbjct: 21 MKASQFFISTLKEAPADAEVVSHKLMTRAGMIKKLGAGIYSLMPMGLRVVRKVEQIVREE 80 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW E+GR++S G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 81 MNRAGAVELVMPVVQPAELWQETGRFESNGPELLRIKDRHGRDFVVQPTSEEVVTDIARQ 140 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE RPRFG+MR REF+MKDAYSFD +K SY M + Sbjct: 141 EIKSYKQLPKNLYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDQASAKASYQVMAAA 200 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R GL + A+SG IGGDLS EF V+A TGE + D+ E Sbjct: 201 YRRIFDRFGLTYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYC-PGSDYAANMEKA 256 Score = 162 bits (411), Expect = 7e-38, Method: Composition-based stats. Identities = 73/190 (38%), Positives = 109/190 (57%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A +D+ N D+ P+ + V RGIE+GH+FY GTKYS M+ATF +GK +++M Sbjct: 410 ALVADLRNVVAGDASPDGQGVLAIERGIEIGHVFYLGTKYSQAMNATFLDVNGKPQFMEM 469 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD-QVCRDACEKIYARLS 373 G YGIG R+ AA IE +HD +GIIWPD++APF + L I + A +K+YA L Sbjct: 470 GCYGIGITRLPAAAIEQNHDERGIIWPDALAPFTVVLCPISPERFPDVKAASDKLYAELL 529 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G DV DD GE+ G+ FA +L+G P +V +G + + +VE +HR + + Sbjct: 530 AAGVDVILDDRGERPGAMFADWELIGVPHRVTIGDRGLKAGEVEYQHRRDSAATTVGVTA 589 Query: 434 VINYASHRFS 443 + + + Sbjct: 590 IFSLLQAKLK 599 >gi|294784787|ref|ZP_06750075.1| proline--tRNA ligase [Fusobacterium sp. 3_1_27] gi|294486501|gb|EFG33863.1| proline--tRNA ligase [Fusobacterium sp. 3_1_27] Length = 567 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 120/251 (47%), Positives = 164/251 (65%), Gaps = 1/251 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEIASHKLMLR GMI + + GIY++LPLG + + + I+REE Sbjct: 1 MRFSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLASGIYAYLPLGYRTIKKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR+D G EMLRL DR+++ + PT EE++T I RS Sbjct: 61 MDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKDRHERDFVLSPTQEEMITAIVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ KFRDE RPRFG+MR REF MKDAYSF + E + M + Sbjct: 121 DISSYKSLPINLYHIQTKFRDERRPRFGLMRGREFTMKDAYSFHTSQESLDEEFLNMRNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S ++ E + Sbjct: 181 YSRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYSD-GSEYAANIEKAVSE 239 Query: 241 DIISLNSIVEQ 251 I +++ Sbjct: 240 LINPPKEELKE 250 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 71/186 (38%), Positives = 102/186 (54%), Gaps = 2/186 (1%) Query: 259 TSDVHNEKLFDSLP-ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K+ ++ K SARGIE G IF G KYS M+AT+ +GK Y+ MG Y Sbjct: 381 VADIRTAKVGENCIIGGKLHSARGIECGQIFKLGDKYSKVMNATYLDENGKTQYMLMGCY 440 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R +AA IE ++D GIIWP S+AP+ + +I ++V EKIY L + Sbjct: 441 GIGVTRTMAAAIEQNNDENGIIWPVSIAPYTVDVIPANIKNEVQVSLAEKIYNELEEEKI 500 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D DD E+ G +F ADL+GFP +++VG + + VE+K R TG ++ E+I Sbjct: 501 DAMLDDRDEKPGFKFKDADLIGFPFKIVVGKR-ADEGIVELKIRRTGETLELPQNEIIAK 559 Query: 438 ASHRFS 443 Sbjct: 560 IKELMK 565 >gi|238650420|ref|YP_002916272.1| threonyl-tRNA synthetase [Rickettsia peacockii str. Rustic] gi|259516667|sp|C4K0X3|SYT_RICPU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238624518|gb|ACR47224.1| threonyl-tRNA synthetase [Rickettsia peacockii str. Rustic] Length = 635 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 73/438 (16%), Positives = 154/438 (35%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + RD +L L + ++G+ W G + + IR++ + G Sbjct: 231 YLLMLEEAEKRDHRKLGRELDLF--HFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L LW SG ++ + +M + +DK + P + IF+ IKSY Sbjct: 289 YTEVKTPVLVDKSLWEASGHWEKFRDDMF-ALETDDKTLALKPMNCPCHVQIFKQGIKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + L R+E G+MR R + DA+ F + + + + + Sbjct: 348 RDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAAEQITDETVSF-CKLLTEV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P S+E D + + Sbjct: 407 YKDFGFTDIKVKFSDRPEIRAGSNE-----------------VWDKAENALKEAVEQAGF 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ A Y + L D++ + ++ F + + A++ Sbjct: 450 TYTLNPGEGAFYGPKLEF---VLTDAIGRQWQCGTLQMD----FVLPER----LDASYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 A G+ + +G++ ++ + G+ +W + I D Sbjct: 499 ASGEKKRPVMLHRAILGSLERFIGILIEEYAGRFPLW------LAPVQVAIATITSDLND 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L G ++ ++I + P+ ++G + + +V I+ T Sbjct: 553 YALEVQKALIDNGVRTDFNISPDKINYKIREFSNQKIPMIAVIGKQEQKNKQVAIRRLGT 612 Query: 424 GIREDMSLEEVINYASHR 441 +E +S+E++I Sbjct: 613 TDQEVLSVEQLIAVVKEE 630 >gi|284031290|ref|YP_003381221.1| threonyl-tRNA synthetase [Kribbella flavida DSM 17836] gi|283810583|gb|ADB32422.1| threonyl-tRNA synthetase [Kribbella flavida DSM 17836] Length = 673 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 66/456 (14%), Positives = 141/456 (30%), Gaps = 47/456 (10%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + G+ + P G + R+ G Sbjct: 252 YLTRLEEAAKRDHRKLGTELDLFS-FPDEIGSGLAVFHPKGGVLRKVMEDYSRQRHVEDG 310 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEV 113 + P + A L+ SG D Y M + + P + + Sbjct: 311 YEFVYTPHITKAHLFETSGHLDWYADGMYPPMHLDEERGPDGELRKQGQDYYLKPMNCPM 370 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IF + +SYR LP ++ +R E G+ R+R F DA+ + + Sbjct: 371 HNLIFDARGRSYRELPLRLFEFGTVYRLEKSGVIHGMTRARGFTQDDAHIYCTREQMRDE 430 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 + L + GL + + + S + Sbjct: 431 L-KNLLTFVLGLLADYGLDDFYLELST----------------KNPEKFVGSDEVWQEAT 473 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + A Y + + D++ ++S ++ F Sbjct: 474 ETLREVAVSSGLELVPDPGGAAFYGPKI---SVQARDAIGRTWQMSTIQLD----FNLPE 526 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 ++ L +A+ + V + G++ AV+ + ++P +AP ++ I Sbjct: 527 RFELEYTAS---DGSRQRPVMIHRALFGSIERFVAVLT---EHYAGVFPPWLAPVQVIGI 580 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 I D ++ A+L G + D +++ + A P +I G + ++ Sbjct: 581 PITDGH---VDYLYQVAAQLKAQGIRIEIDASDDRMQKKIRNAQKAKVPYMLIAGDEDMA 637 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 V ++R + + + + + V Sbjct: 638 AGSVSFRYRDGSQKNGIPIADAVAEIVESVQKRVQV 673 >gi|99081562|ref|YP_613716.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Ruegeria sp. TM1040] gi|123077585|sp|Q1GFW2|SYT_SILST RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|99037842|gb|ABF64454.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Ruegeria sp. TM1040] Length = 648 Score = 236 bits (602), Expect = 6e-60, Method: Composition-based stats. Identities = 83/444 (18%), Positives = 148/444 (33%), Gaps = 45/444 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD ++ L + + + G W P G + + +R Q+R Sbjct: 234 KAHLTMLEEAAKRDHRKLGREMNLF--HMQEEAPGQVFWHPNGWRIYTTLQDYMRRMQDR 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIY-----GPTHEEVMTDIF 118 G +E++ P + LW +SG +D Y + M + D A P + +F Sbjct: 292 DGYVEVNTPQVVDRKLWEKSGHWDKYQENMFIVEVDEDHAREKAVNALKPMNCPCHVQVF 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F D + F + + + K Sbjct: 352 NQGLKSYRDLPLRMAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFCTEDQITSET-AKF 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +++ LG + ++ + P S E D + Sbjct: 411 IAFLSKVYADLGFDNWTIKLSTRPEQRIGSDE-----------------TWDNMEQALGD 453 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I+E A Y + L D++ N + ++ Sbjct: 454 ACKAAGYDYEILEGEGAFYGPKLEF---TLTDAIGRNWQCGTLQVDANLP--------ER 502 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + A+F G DG H + +G+ ++ H GK W S+ Sbjct: 503 LEASFIGQDGSKHRPVMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASIT---- 558 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++ L G D E+I + + P+ + VG + V + V Sbjct: 559 --SEADDYVNEVVETLRAAGVRAEADTRNEKINYKVREHSVGKVPVILAVGHREVEERTV 616 Query: 417 EIKHRLTGIREDMSLEEVINYASH 440 ++ + SL V + Sbjct: 617 SVRRLGEKQTKVESLTNVTEELAK 640 >gi|242033449|ref|XP_002464119.1| hypothetical protein SORBIDRAFT_01g012680 [Sorghum bicolor] gi|241917973|gb|EER91117.1| hypothetical protein SORBIDRAFT_01g012680 [Sorghum bicolor] Length = 739 Score = 236 bits (602), Expect = 6e-60, Method: Composition-based stats. Identities = 75/446 (16%), Positives = 152/446 (34%), Gaps = 38/446 (8%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R ++Y + + RD I L H+ S G +LP G + + + +R++ Sbjct: 331 RLTEYKHFLEEAKKRDHRILGKAQELF--FFHELSPGSCFFLPHGARIYNKLMDFMRQQY 388 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G E+ P + + LW SG +Y + M + + + P + +F + Sbjct: 389 RARGYQEVLSPNMYNMQLWETSGHAANYKENMF-VFEIEKQEFGLKPMNCPGHCLMFANR 447 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP + R+EL G+ R R F DA+ F + + Sbjct: 448 VRSYRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCREDQIKDE-VKAVLDF 506 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++ G K + + P E + + Sbjct: 507 INYVYEIFGFKY-ELELSTRPEKYLGEIE-----------------TWNKAEQQLTEALN 548 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I E A Y D+ +FD+L + + ++ F ++ L SA Sbjct: 549 EFGKPWKINEGDGAFYGPKIDIG---VFDALKRKFQCATLQLD----FQLPIRFKLAYSA 601 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + V + +G++ + A++ ++GK +W + + Sbjct: 602 E--DEAKIERPVMIHRAILGSVERMFAILLEHYNGKWPLW------LSPRQAIVCSVSSG 653 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + +++ A L + G D I + A L F ++VG++ + ++ Sbjct: 654 SVEYAKQVLATLHEAGFHADIDASDRTIQKKVREAQLAQFNYILVVGAQEAETGNICVRV 713 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R MS++ + + R Sbjct: 714 RDNADLATMSVDGFVTRLKEEIAAFR 739 >gi|157828174|ref|YP_001494416.1| threonyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith'] gi|166225494|sp|A8GR83|SYT_RICRS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157800655|gb|ABV75908.1| threonyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith'] Length = 635 Score = 236 bits (602), Expect = 6e-60, Method: Composition-based stats. Identities = 73/438 (16%), Positives = 154/438 (35%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + RD +L L + ++G+ W G + + IR++ + G Sbjct: 231 YLLMLEEAEKRDHRKLGRELDLF--HFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L LW SG ++ + +M + +DK + P + IF+ IKSY Sbjct: 289 YTEVKTPVLVDKSLWEASGHWEKFRDDMF-ALETDDKTLALKPMNCPCHVQIFKQGIKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + L R+E G+MR R + DA+ F + + + + + Sbjct: 348 RDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAAEQITDETVSF-CKLLTEV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P S+E D + + Sbjct: 407 YKDFGFTDIKVKFSDRPEIRAGSNE-----------------VWDKAENALKEAVEQAGF 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ A Y + L D++ + ++ F + + A++ Sbjct: 450 TYTLNPGEGAFYGPKLEF---VLTDAIGRQWQCGTLQMD----FVLPER----LDASYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 A G+ + +G++ ++ + G+ +W + I D Sbjct: 499 ASGEKKRPVMLHRAILGSLERFIGILIEEYAGRFPLW------LAPVQVAIATITSDLND 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L G ++ ++I + P+ ++G + + +V I+ T Sbjct: 553 YALEVQKALIDNGVRTDFNISPDKINYKIREFSNQKIPMIAVIGKQEQENKQVAIRRLGT 612 Query: 424 GIREDMSLEEVINYASHR 441 +E +S+E++I Sbjct: 613 TDQEVLSVEQLIAVVKEE 630 >gi|262276504|ref|ZP_06054313.1| prolyl-tRNA synthetase [Grimontia hollisae CIP 101886] gi|262220312|gb|EEY71628.1| prolyl-tRNA synthetase [Grimontia hollisae CIP 101886] Length = 571 Score = 236 bits (602), Expect = 6e-60, Method: Composition-based stats. Identities = 125/290 (43%), Positives = 168/290 (57%), Gaps = 20/290 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLQKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 INNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR+REF M DAYSFDL EG + SY M + Sbjct: 121 EVNSYKQLPLNLYQIQTKFRDEVRPRFGVMRAREFSMMDAYSFDLDKEGLQKSYEAMHTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y F R+GL P+ A++G IGG SHEF VLA++GE + D+ E Sbjct: 181 YCAAFDRMGLDYRPVLADTGAIGGSASHEFHVLANSGE-DIIAFSSESDYAANIEMAEAV 239 Query: 236 --------------NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 D D ++ +VEQ+ P T K D++ Sbjct: 240 APAGERAAPTQEMTLVDTPDAKTIAQLVEQFGLPIEKTVKTLFVKASDAV 289 Score = 177 bits (448), Expect = 4e-42, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 111/206 (53%), Gaps = 3/206 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPM 298 D I +D+ N D P K RGIEVGHIF GT YS M Sbjct: 366 DDKHYFGINWGRDVELGDVADIRNVVEGDPSPCGKGTIQLKRGIEVGHIFQLGTNYSEKM 425 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 GADGK+ ++MG YGIG RVVAA IE +HD GIIWPD++APF ++++ + Sbjct: 426 GCGVLGADGKNVILEMGCYGIGVSRVVAAAIEQNHDENGIIWPDAIAPFTVAIVPMNMHK 485 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + +DA EK+YA L+ G +V +DD E+ G F+ +L+G P +I+G + + + E Sbjct: 486 SERVKDAAEKLYAELTAAGIEVLFDDRKERPGVMFSDMELIGIPHTIIIGERSMDNGVFE 545 Query: 418 IKHRLTGIREDMSLEEVINYASHRFS 443 KHR G + + +E ++ + + + Sbjct: 546 YKHRRNGEKVPVDMENMVEFLKAKLA 571 >gi|147669325|ref|YP_001214143.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Dehalococcoides sp. BAV1] gi|189083604|sp|A5FRB3|SYT_DEHSB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|146270273|gb|ABQ17265.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Dehalococcoides sp. BAV1] Length = 582 Score = 236 bits (602), Expect = 6e-60, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 153/442 (34%), Gaps = 40/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + G+ +WLP G + ++E + G Sbjct: 174 YLNMLEEAAKRDHRKLGKELELFSLH-QEIGGGLVNWLPNGAIVRHLIEEFWKKEHLKRG 232 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + DLW SG + Y + M D + + + P + +F++ +SY Sbjct: 233 YDLVYTPHIAKVDLWKTSGHWGFYRENMYSPMDIDGEEYVLKPMNCVYHILMFKNRTRSY 292 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 + LP ++ +R E G+ R R F DA+ F L + K + + Sbjct: 293 KELPIRMAELGTVYRYERSGVLHGLSRVRGFTQDDAHIFCLYDQLEKEVVK-VLDLAKFM 351 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G + + P + D ++ + Sbjct: 352 IDTFGFTKYKVMLSTRP-----------------EKYVGELDKWEYATDILAKALEANQI 394 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + Y D+ E D+L + ++ F ++ + G Sbjct: 395 PYQVDPGEGVFYGPKIDIKFE---DALGRAWQGPTIQVD----FQLPERFD----VSVVG 443 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DGKD V + +G+M + + + G +P ++P + +I I + Sbjct: 444 EDGKDQPVAMVHRTVLGSMERFMSCLT---EQYGGAFPAWLSPKQAMVIPIADRH---TE 497 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 EK+ L + V D E + + A L P ++VG K + V ++ R T Sbjct: 498 FAEKLACELREEEVRVEVDSRSETMNQKIRQAQLAKIPYMLVVGDKEIETQSVAVRTR-T 556 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G ++ M E + + Sbjct: 557 GSQQVMPFAEFKSMLLAKIKTK 578 >gi|222086050|ref|YP_002544582.1| threonyl-tRNA synthetase [Agrobacterium radiobacter K84] gi|254783503|sp|B9JFG4|SYT_AGRRK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|221723498|gb|ACM26654.1| threonyl-tRNA synthetase [Agrobacterium radiobacter K84] Length = 662 Score = 236 bits (602), Expect = 6e-60, Method: Composition-based stats. Identities = 74/441 (16%), Positives = 143/441 (32%), Gaps = 40/441 (9%) Query: 7 FLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L IL + RD ++ L + G+ W G + + + +R Sbjct: 234 YLHILAEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHGKGWRIFQTLVSYMRRRLE-GD 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIFRS 120 E++ P + LW SG + Y M ++ +D+ P + IF+ Sbjct: 291 YQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHIQIFKH 350 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR LP + R E G+MR R F DA+ F + + Sbjct: 351 GLKSYRELPIRLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKIN-D 409 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L ++ G + + ++ + P A++ +V I +++ Sbjct: 410 LILSVYEDFGFEEVVVKLSTRPEKRVGDDALWDRAESVMMEVL-------KTIEAQSGGR 462 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L A Y + L D++ + ++ FG Sbjct: 463 IKTGIL----PGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG-------- 507 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + + + G+M ++ + G +W + ++ Sbjct: 508 AFYIDQHSEKTQPVMIHRAICGSMERFLGILIENFAGHMPLWVSPLQVVVATIT------ 561 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 E++ L G V D E+I + + P+ ++ G K + V I Sbjct: 562 SEADGYGEEVAEALRDAGLTVETDFRNEKINYKIREHSVTKVPVIIVCGKKEAEERSVNI 621 Query: 419 KHRLTGIREDMSLEEVINYAS 439 + + + MSL+E I S Sbjct: 622 RRLGSQAQTAMSLDEAIASLS 642 >gi|319653813|ref|ZP_08007907.1| threonyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] gi|317394349|gb|EFV75093.1| threonyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] Length = 399 Score = 236 bits (602), Expect = 6e-60, Method: Composition-based stats. Identities = 74/437 (16%), Positives = 156/437 (35%), Gaps = 39/437 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 ++ + +L L T M + + G+ +LP G + + + R + R G E+ Sbjct: 1 MEAEKINHRKLGQELELFTSM--EEAPGMPFFLPNGMVMRNELESYWRRKHQRAGYQEIK 58 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + +LW +SG ++ Y + M ++ +++ P + +F S +SYR LP Sbjct: 59 TPIMMKQELWEQSGHWNHYHENM-YFSNVDEQNYAIKPMNCPGAILVFNSKRRSYRELPL 117 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + ++ L R EL G++R R F DA+ F L + Sbjct: 118 RYAELGLVHRHELSGSLNGLLRVRSFTQDDAHLFV-----MADQIEAEIDKILVLIDEFY 172 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 ++ V T + S++ + + + + I Sbjct: 173 SHFG--------------FDYKVELSTRPEEYMGSQEMWERAEGALESVLKNKGVNYQIN 218 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D H + DSL + + ++ F A + Sbjct: 219 PGDGAFYGPKIDFH---ILDSLGRSWQCGTIQLD----FQMPQ---KFNCAYVGEDNKLH 268 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + + G++ A++ + +P ++P + +I I + + + Sbjct: 269 LPIMIHRAIFGSVERFMAILI---EHFAGDFPLWLSPVQAKIIPISDSHA---EYADYVK 322 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 ++L + G D E++G + A P +++G K + + ++ R G M Sbjct: 323 SQLEEAGIRAEADFRTEKMGLKIREAAKQKVPYMLVIGDKEMEQQSLSLRKRKEGNIGVM 382 Query: 430 SLEEVINYASHRFSNNR 446 S+++VI + + R Sbjct: 383 SIKDVIERFINETNGGR 399 >gi|254303428|ref|ZP_04970786.1| proline--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323620|gb|EDK88870.1| proline--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 567 Score = 236 bits (602), Expect = 6e-60, Method: Composition-based stats. Identities = 120/251 (47%), Positives = 164/251 (65%), Gaps = 1/251 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEIASHKLMLR GMI + + GIY++LPLG + + + I+REE Sbjct: 1 MRFSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLASGIYAYLPLGYRTIKKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR+D G EMLRL DR+++ + PT EE++T I RS Sbjct: 61 MDRAGALELLMPVVQPAELWQESGRWDVMGAEMLRLKDRHERDFVLSPTQEEMITAIIRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ KFRDE RPRFG+MR REF MKDAYSF + E + M + Sbjct: 121 DISSYKSLPINLYHIQTKFRDERRPRFGLMRGREFTMKDAYSFHTSQESLDEEFLNMRDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S ++ E + Sbjct: 181 YTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYSD-GSEYAANIEKAVSE 239 Query: 241 DIISLNSIVEQ 251 I +++ Sbjct: 240 LINPPKEELKE 250 Score = 162 bits (411), Expect = 8e-38, Method: Composition-based stats. Identities = 74/184 (40%), Positives = 103/184 (55%), Gaps = 2/184 (1%) Query: 261 DVHNEKLFDSLP-ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 D+ K+ ++ K SARGIE G IF G KYS M+AT+ +GK Y+ MG YGI Sbjct: 383 DIRTAKVGENCITGGKLHSARGIECGQIFKLGDKYSKAMNATYLDENGKTQYMLMGCYGI 442 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G R +AA IE ++D GIIWP S+AP+ + +I ++V + EKIY L + D Sbjct: 443 GVTRTMAAAIEQNNDENGIIWPVSIAPYIVDVIPANIKNEVQVNLAEKIYNELEEEKIDS 502 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 DD E+ G +F ADL+GFP +V+VG + + VE+K R TG ++S EVI Sbjct: 503 MLDDRDEKPGFKFKDADLIGFPFKVVVGKR-ADEGIVELKIRRTGETLEVSENEVIAKIK 561 Query: 440 HRFS 443 Sbjct: 562 ELMK 565 >gi|320451414|ref|YP_004203510.1| threonyl-tRNA synthetase [Thermus scotoductus SA-01] gi|320151583|gb|ADW22961.1| threonyl-tRNA synthetase [Thermus scotoductus SA-01] Length = 659 Score = 236 bits (602), Expect = 6e-60, Method: Composition-based stats. Identities = 85/450 (18%), Positives = 157/450 (34%), Gaps = 41/450 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQ 61 +Y + + RD +L L +I KG+ WLP G + + A +REEQ Sbjct: 238 LKEYLWQLEEAKKRDHRRLGRELELF--LIDPMVGKGLVLWLPKGNVIREELMAFMREEQ 295 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK----AMIYGPTHEEVMTDI 117 R G ++ P + S +L+ SG Y Y + ++ + P + I Sbjct: 296 IRRGYQLVTTPHIGSLELYRTSGHYPYYAESQFPPISFKERGEEEEYLLKPMNCPHHIRI 355 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 + +SYR LP + +R E G+ R R F DA+ F TPE K + Sbjct: 356 YAFKKRSYRELPLRLAEFGTVYRYEKAGELLGLTRVRGFTQDDAHLFC-TPEQVKEEFLG 414 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + L++ LGLK R + D + + Sbjct: 415 VLDLVLKVLSTLGLKDYRARIGTR--------------DPKSDKYVGDEAKWSLAERQIE 460 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + ++ E A Y D + D+L ++ ++ FG Sbjct: 461 EAALEAGLHYTVEEGDAAFYGPKLDF---VVKDALGREWQLGTIQVDYNLPERFG----- 512 Query: 297 PMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 T+ G DG +H + G++ ++ G +W V + + Sbjct: 513 ---LTYVGPDGAEHRPVMIHRAPFGSLERFIGILIEHFAGDFPLWLAPVQVVVVPV---- 565 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + D +++ +L + G D E++ ++ A++ P ++VG + ++ Sbjct: 566 --SEKQEDYAKEVVFKLKEAGLRAEADLRPERMQARIRDAEVQKVPYVLVVGDREKAEGT 623 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V ++ R G M L + A + Sbjct: 624 VSVRRRHRGNLGSMPLAAFLEAALKEYKER 653 >gi|260103159|ref|ZP_05753396.1| threonine-tRNA ligase [Lactobacillus helveticus DSM 20075] gi|260083018|gb|EEW67138.1| threonine-tRNA ligase [Lactobacillus helveticus DSM 20075] Length = 644 Score = 236 bits (602), Expect = 6e-60, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 156/441 (35%), Gaps = 36/441 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + RD L L + + G+ W+P G V I + + G Sbjct: 232 RRQEIKERDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQ 289 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYR 126 + P L + D + SG + Y +M D D M P + IF+ HI+SYR Sbjct: 290 HVYTPVLMNLDAYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIFKHHIRSYR 349 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ + R E G+ R RE + D ++F + + + K+ + ++ Sbjct: 350 DLPLRVAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVVLDQVQTE-FAKILKLIMEVY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + R + F + + + DD+ Sbjct: 409 KDFDITDYYFRLS-------------YRDPKNTDKYFANDEMWEKSQKMLKGAMDDLGLD 455 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y D+ + +L ++ +S ++ F ++ T+ G Sbjct: 456 YVEAEGEAAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPDRF----GLTYVGK 504 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG++H + +G M A + + G W + I +++ + Sbjct: 505 DGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLA-----PVQAEIIPVNNEAHGEY 559 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 EK+ A L+K G V DD E++G + + P +++G + + KV ++ T Sbjct: 560 AEKVRAELAKRGFRVEVDDRNEKMGYKIRESQTQKVPYTLVLGDEEMKSGKVNLRRYGTD 619 Query: 425 IREDMSLEEVINYASHRFSNN 445 SL++ IN + Sbjct: 620 EEISKSLDDFINEIDADVKSY 640 >gi|166365900|ref|YP_001658173.1| threonyl-tRNA synthetase [Microcystis aeruginosa NIES-843] gi|166088273|dbj|BAG02981.1| threonyl-tRNA synthetase [Microcystis aeruginosa NIES-843] Length = 618 Score = 236 bits (602), Expect = 6e-60, Method: Composition-based stats. Identities = 72/443 (16%), Positives = 151/443 (34%), Gaps = 38/443 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNR 63 Y + RD +L L + I + G+ W P G + R+ Sbjct: 209 NYLQQKEEAQRRDHRKLGQQLKLFS--IQEDAGGGLVFWHPRGATMRYLIEDYWRQAHLE 266 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P L + DLW SG +D Y M + ++ P + +++ + Sbjct: 267 AGYQFLYTPHLANLDLWKTSGHWDFYRDNMFEAIELEQQSYQIKPMNCPFHVLTYQNDLH 326 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR P + ++ +R E G+MR R F DA+ F L + + + Sbjct: 327 SYREFPLRWAELGTVYRYERSGVLHGLMRVRGFTQDDAHIFCLPEQIAAE-ILGVLNLTE 385 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +I G + + + P S + + + Sbjct: 386 KILSDFGFTNYQINLSTRPSKS-----------------VGSDSVWELATAALIEALNAK 428 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y D+ K+ D++ + S ++ F ++ + A Sbjct: 429 KWDYIEDQGGGAFYGPKIDI---KIQDAIGRMWQCSTIQVD----FNLPERFDMQYVAR- 480 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 ++ + + G++ ++ + +P +AP ++ L+ + + Sbjct: 481 --DGTRERPIMIHRAIFGSLERFFGILI---ENYAGDFPLWLAPIQVRLLPV---SDEQQ 532 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +L + G V D GE++G Q +L P+ ++G + VS + ++ R Sbjct: 533 HYALGVAMQLKQAGYRVEIDKTGERLGKQIRTGELEKIPVLAVIGKREVSSKTLSVRTRQ 592 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 G M+L +++ + Sbjct: 593 GGDLGSMTLVDLLGKMQTAILSK 615 >gi|332978157|gb|EGK14892.1| proline--tRNA ligase [Psychrobacter sp. 1501(2011)] Length = 576 Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 126/306 (41%), Positives = 181/306 (59%), Gaps = 6/306 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DA+I S +LM+R G+I + + G+Y WLP+G K L V I+REE Sbjct: 1 MRASQFLFATLKETPSDADIVSSQLMVRAGLIRKLASGLYVWLPMGLKVLQKVEKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P Q A+LW ESGR++ YG E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MQNIGAQEVLMPMTQPAELWQESGRFEDYGPELLRFTDRHNRDFVLGPTHEEVITDLARG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP TF+QIQ KFRDE+RPRFG+MR+REF MKDAYSF + + +Y +M+ + Sbjct: 121 ELRSYKQLPVTFFQIQGKFRDEIRPRFGIMRAREFTMKDAYSFHVDQASLEITYQQMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP---SENT 237 Y RIF RLGL + A++G IGG SHEF VLA +GE + S D+ +E Sbjct: 181 YTRIFQRLGLTFRAVLADTGSIGGSASHEFHVLAGSGEDAIAFSD-GSDYAANVELAEAV 239 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D+ + + P T++ + F +P V ++ HI GT+ Sbjct: 240 CNDERAAPTQDRQDVATPKIQTNE--DLAKFLDIPLETTVKTLIVKGHHINEDGTEGDEQ 297 Query: 298 MSATFK 303 + A Sbjct: 298 LVALVV 303 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 8/198 (4%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A D+ N D P+ K RGIEVGHIF G KYS ++ T G DGK Sbjct: 379 ERDATITEVVDIRNVVEGDPSPDGKGTLSIKRGIEVGHIFQLGDKYSKALNCTVMGEDGK 438 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA------PFKISLINIKAHDQVCR 362 + MG YGIG R++AA IE +HD GIIW + PF I+++ +K+ ++ Sbjct: 439 PVTLMMGCYGIGVSRIIAAAIEQNHDDNGIIWAKTPNVNDSIAPFDIAIVPMKSKEETVM 498 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 E +Y L G +V DD E+ G +FA +L+G P +++V + +++ K E R Sbjct: 499 QTAEALYQELKAKGLNVLLDDRNERPGVKFADLELIGIPHRIVVSDRNLAEEKYEYVDRR 558 Query: 423 TGIREDMSLEEVINYASH 440 G ++ +S EEV+ S Sbjct: 559 DGEKQLLSREEVLAKVSQ 576 >gi|297617181|ref|YP_003702340.1| prolyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680] gi|297145018|gb|ADI01775.1| prolyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680] Length = 567 Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 114/277 (41%), Positives = 174/277 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F P L+E+P +AE SH+L+ R GM+ + + GIY++LPLG + + + I+REE Sbjct: 1 MKASELFFPTLREDPAEAETVSHRLLFRAGMVRKTAAGIYTYLPLGFRVIKKIMNIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G E+ +P +Q +LW +SGR++ YG EM RL DR+ + GPTHEEV+TD+ Sbjct: 61 MDRAGGQEVGLPIIQPRELWAQSGRWEVYGDEMFRLKDRHQRDFCLGPTHEEVITDVVNH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR+LP YQIQ K+RDE+RPRFG++R REF+MKD YSFD+ G + SY KM+ + Sbjct: 121 EVHSYRDLPLLLYQIQNKYRDEIRPRFGLLRGREFIMKDLYSFDVDEAGLEVSYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y R+F RLGL+ + A+SG IGG++SHEFIVLA TGE+ + + Sbjct: 181 YCRVFERLGLQYRVVEADSGAIGGNVSHEFIVLAPTGESVIVFCDACEYAANIEKAECIP 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV 277 + + + + + + +F ++P+ ++V Sbjct: 241 HMSAAENELPLTKVSTPGQKTIQDISVFLNIPDTRQV 277 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 3/191 (1%) Query: 258 ATSDVHNEKLFDSLP---ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A D+ N + D P E K + RGIE GHIF GTKYS M ATF +GK+ + M Sbjct: 377 AFCDLRNAEEGDICPVCREGKLKATRGIETGHIFKLGTKYSGKMGATFLDENGKERLMVM 436 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G YGIG R +AA +E +HD GIIWP ++AP++I ++ + + D + K+Y L K Sbjct: 437 GCYGIGISRTMAAAVEQNHDENGIIWPLAIAPYQIIIVPVNSKDGQQMEIGMKLYHELVK 496 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD ++ G +F ADL+G P+++ +G K + +VEIK R + + +E V Sbjct: 497 QGYEVIIDDRDQRAGVKFKDADLIGVPVRITIGPKLLKAGQVEIKKRWENEVKGVPIEHV 556 Query: 435 INYASHRFSNN 445 + Sbjct: 557 STEVRSILRED 567 >gi|313674626|ref|YP_004052622.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Marivirga tractuosa DSM 4126] gi|312941324|gb|ADR20514.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Marivirga tractuosa DSM 4126] Length = 654 Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 83/443 (18%), Positives = 158/443 (35%), Gaps = 43/443 (9%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD ++ L + G+ WLP G D + +++ Q + G + P Sbjct: 241 AKKRDHRKLGKEMELFA-FSEKVGLGLPLWLPKGTMLRDRLENFLKKAQVKAGYQPVITP 299 Query: 73 TLQSADLWVESGRYDSYGKEMLRLA-------DRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + + +L++ SG Y+ YGK+ R ++D+ + P + +I+++ +SY Sbjct: 300 HIGNKELYITSGHYEKYGKDSFRPIAAPSDDDSKSDEEYLLKPMNCPHHCEIYKTKPRSY 359 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 ++LP + +R E G+ R R F DA+ F P+ K + K+ L + Sbjct: 360 KDLPLRLAEFGTVYRYEQSGELHGLTRVRSFTQDDAHIFCR-PDQVKEEFIKVIDLVLFV 418 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F+ LG + + + + D S ++ Sbjct: 419 FNSLGFEDFVTQVSLRD-------------PDNREKYIGGDEVWDKAEKSIIEAAEEKGL 465 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I A Y D + D+L + ++ ++ + G Sbjct: 466 KTVIELGEAAFYGPKLDFM---VKDALGRSWQLGTIQVDYNLP--------ERFKLEYVG 514 Query: 305 ADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 AD H M R VA +IE + + Sbjct: 515 ADNSKHRPVMIHRAPFGSMERFVAVLIEHCAGNFPLWLSPEQVAVLPI-------SEKYA 567 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D K+Y+ L F D E+IG + A++ P +IVG + ++ KV I+ Sbjct: 568 DYANKVYSELEANDITGFIDHRDEKIGRKIRDAEINKIPYMLIVGEQEAAEEKVSIRKHG 627 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 G +MSLE+ ++ + + +++ Sbjct: 628 EGDVGNMSLEDFKSFFNQKVTDS 650 >gi|67459371|ref|YP_246995.1| threonyl-tRNA synthetase [Rickettsia felis URRWXCal2] gi|73919821|sp|Q4UKU3|SYT_RICFE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|67004904|gb|AAY61830.1| Threonyl-tRNA synthetase [Rickettsia felis URRWXCal2] Length = 635 Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 73/439 (16%), Positives = 151/439 (34%), Gaps = 40/439 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y + + RD +L L + ++G+ W G + + IR++ + Sbjct: 230 NYLFMLEEAEKRDHRKLGRELDLF--HFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKN 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P L LW SG ++ + ++M + +DK + P + IF+ IKS Sbjct: 288 GYTEVKTPVLVDKSLWEASGHWEKFREDMF-ALETDDKTLALKPMNCPCHVQIFKQGIKS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + L R+E G+MR R + DA+ F + + + + Sbjct: 347 YRDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETVSF-CKLLTE 405 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G I ++ P S E D + + Sbjct: 406 VYKDFGFTDIKVKFSDRPEIRAGSDE-----------------VWDKAENALKEAVEKAG 448 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 ++ A Y + L D++ + ++ F + + A++ Sbjct: 449 FTYTLNPGEGAFYGPKLEF---VLTDAIGRQWQCGTLQMD----FVLPER----LDASYI 497 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 A G+ + +G++ ++ + G+ IW + I Sbjct: 498 AASGEKKRPVMLHRAILGSLERFIGILIEEYAGRFPIW------LAPIQVAIATITSDLN 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D ++ L G + ++I + P+ ++G + + V I+ Sbjct: 552 DYALEVQKALIDNGVRTDINISPDKINYKIREFSNQKIPMIAVIGKQEKENKHVTIRRLG 611 Query: 423 TGIREDMSLEEVINYASHR 441 T +E +S+E++I Sbjct: 612 TTDQEVLSIEQLIALIKKE 630 >gi|85711988|ref|ZP_01043042.1| Prolyl-tRNA synthetase [Idiomarina baltica OS145] gi|85694174|gb|EAQ32118.1| Prolyl-tRNA synthetase [Idiomarina baltica OS145] Length = 569 Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 120/235 (51%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAEI SH+LMLR GMI + + G+Y+W P G + L V ++REE Sbjct: 1 MRSSQYLLSTLKETPSDAEIVSHQLMLRAGMIRKVASGLYTWTPTGLRVLKKVERVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R A+E+ +P +Q ADLW ESGR++ YG E+LR+ DR+++ + GPTHEE+++++ R Sbjct: 61 MERINALEILMPMVQPADLWQESGRWEDYGPELLRIKDRHERDFLLGPTHEEIISELVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP T +QIQ KFRDE+RPRFGVMR+REF+MKDAYSF LT E + +Y++M+ + Sbjct: 121 EVSSYKQLPLTLFQIQTKFRDEIRPRFGVMRAREFMMKDAYSFHLTDESLQQAYDEMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P+ A++G IGG SHEF VLA +GE + S D+ E Sbjct: 181 YCRIFQRLGLDFRPVIADTGSIGGHASHEFHVLAGSGEDAIAFSD-GSDYAANVE 234 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 66/195 (33%), Positives = 100/195 (51%), Gaps = 3/195 (1%) Query: 253 TAPYAATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A +A D+ N D + ARGIEVGHIF G KYS M GK Sbjct: 374 DAEISAVEDIRNVVAGDPSPCGQGTLQIARGIEVGHIFQLGKKYSNAMKVGVLSETGKHE 433 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIY 369 + MG YGIG RVVAA IE HD +GI WP+ +APF+++++ + H + ++Y Sbjct: 434 TLTMGCYGIGVSRVVAAAIEQFHDDRGINWPNELAPFEVAIVPMNMHKSARVQKVANELY 493 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +L G DV +DD E+ G F +L+G P Q+++G + + + VE + R ++ M Sbjct: 494 QQLRDAGFDVLFDDRKERPGVMFTDMELIGVPHQIVIGERNLDEEMVEYQSRSDRDKQKM 553 Query: 430 SLEEVINYASHRFSN 444 + V+ + + N Sbjct: 554 PINSVLEFLNQTLRN 568 >gi|294339022|emb|CAZ87369.1| proline tRNA synthetase [Thiomonas sp. 3As] Length = 576 Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 122/237 (51%), Positives = 166/237 (70%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ +++P DA++ S LMLR GMI +H+ G+YS+LPLG +++ V AI+REE Sbjct: 1 MKISRFFISTQKDDPADADVRSQALMLRAGMIKKHAAGLYSYLPLGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW E+GR D +G E+LR+ DR+D+ + PT EEV+TD+ RS Sbjct: 61 MNRAGAIELLMPVVQPAELWQETGRLDQFGPELLRIKDRHDRDFVIQPTSEEVVTDLVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++S+R LP FY IQ KFRDE RPRFGVMR+REF MKDAYSFD E ++ SY MF + Sbjct: 121 EVRSWRQLPLNFYHIQTKFRDERRPRFGVMRAREFTMKDAYSFDRDFEAAQISYRVMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y+RIF R G + + A+SG IGG LSHEF V+ADTGE + + DF E Sbjct: 181 YVRIFQRFGFEFRAVAADSGAIGGSLSHEFHVIADTGEDAIAYCE-GSDFAANIEKA 236 Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats. Identities = 72/192 (37%), Positives = 101/192 (52%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N + D P+ K V RGIEVGH+FY GTKYS M ATF GK + Sbjct: 384 PEPEVADIRNVQAGDPSPDGKGVLSICRGIEVGHVFYLGTKYSAAMGATFLDDKGKSQTL 443 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 +MG YGIG R++ A IE +HD KG+IWPD++APF + I + R A + +YA Sbjct: 444 EMGCYGIGITRILGACIEQNHDAKGMIWPDAIAPFTAVICPIGYDRSEAVRQAADALYAE 503 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD GE+ G +L+G P ++++ + ++ VE +HR + L Sbjct: 504 LIAAGVDVALDDRGERPGVMLGDWELIGVPHRMVISDRGLAAGTVEYQHRRESAPTVLPL 563 Query: 432 EEVINYASHRFS 443 E R Sbjct: 564 AEASAQLQARLQ 575 >gi|296135005|ref|YP_003642247.1| prolyl-tRNA synthetase [Thiomonas intermedia K12] gi|295795127|gb|ADG29917.1| prolyl-tRNA synthetase [Thiomonas intermedia K12] Length = 576 Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 122/237 (51%), Positives = 166/237 (70%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ +++P DA++ S LMLR GMI +H+ G+YS+LPLG +++ V AI+REE Sbjct: 1 MKISRFFISTQKDDPADADVRSQALMLRAGMIKKHAAGLYSYLPLGLRSIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW E+GR D +G E+LR+ DR+D+ + PT EEV+TD+ RS Sbjct: 61 MNRAGAIELLMPVVQPAELWQETGRLDQFGPELLRIKDRHDRDFVIQPTSEEVVTDLVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++S+R LP FY IQ KFRDE RPRFGVMR+REF MKDAYSFD E ++ SY MF + Sbjct: 121 EVRSWRQLPLNFYHIQTKFRDERRPRFGVMRAREFTMKDAYSFDRDFEAAQISYRVMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y+RIF R G + + A+SG IGG LSHEF V+ADTGE + + DF E Sbjct: 181 YVRIFQRFGFEFRAVAADSGAIGGSLSHEFHVIADTGEDAIAYCE-GSDFAANIEKA 236 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 71/192 (36%), Positives = 101/192 (52%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N + D P+ K V RGIEVGH+FY GTKYS M ATF GK + Sbjct: 384 PEPEVADIRNVQAGDPSPDGKGVLSICRGIEVGHVFYLGTKYSAAMGATFLDDKGKSQTL 443 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 +MG YGIG R++ A IE +HD KG+IWPD++APF + I + R A + +YA Sbjct: 444 EMGCYGIGITRILGACIEQNHDAKGMIWPDAIAPFTAVICPIGYDRSEAVRQAADALYAE 503 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD GE+ G +L+G P ++++ + ++ VE +HR + L Sbjct: 504 LIAAGVDVALDDRGERPGVMLGDWELIGVPHRMVISDRGLAAGTVEYQHRRESAPTVLPL 563 Query: 432 EEVINYASHRFS 443 + R Sbjct: 564 ADACAQLQARLQ 575 >gi|328464763|gb|EGF36081.1| threonyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463] Length = 644 Score = 236 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 156/441 (35%), Gaps = 36/441 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + RD L L + + G+ W+P G V I + + G Sbjct: 232 RRQEIKERDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQ 289 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYR 126 + P L + D + SG + Y +M D D M P + IF+ HI+SYR Sbjct: 290 HVYTPVLMNLDAYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIFKHHIRSYR 349 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ + R E G+ R RE + D ++F + + + K+ + ++ Sbjct: 350 DLPLRVAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVVLDQVQTE-FAKILKLIMEVY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + R + F + + + DD+ Sbjct: 409 KDFDITDYYFRLS-------------YRDPKNTDKYFANDEMWEKSQKMLKGAMDDLGLD 455 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y D+ + +L ++ +S ++ F ++ T+ G Sbjct: 456 YVEAEGEAAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPDRF----GLTYVGK 504 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG++H + +G M A + + G W + I +++ + Sbjct: 505 DGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLA-----PVQAEIIPVNNEAHGEY 559 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 EK+ A L+K G V DD E++G + + P +++G + + KV ++ T Sbjct: 560 AEKVRAELAKRGFRVEVDDRNEKMGYKIRESQTQKVPYTLVLGDEEMKSGKVNLRRYGTD 619 Query: 425 IREDMSLEEVINYASHRFSNN 445 SL++ IN + Sbjct: 620 EEISKSLDDFINEIDADVKSY 640 >gi|34303926|ref|NP_689481.2| probable prolyl-tRNA synthetase, mitochondrial precursor [Homo sapiens] gi|73919761|sp|Q7L3T8|SYPM_HUMAN RecName: Full=Probable prolyl-tRNA synthetase, mitochondrial; AltName: Full=Proline--tRNA ligase; Short=ProRS; Flags: Precursor gi|33873290|gb|AAH11758.2| Prolyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens] gi|39644604|gb|AAH07956.2| Prolyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens] gi|56204888|emb|CAI18996.1| prolyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens] gi|119627074|gb|EAX06669.1| prolyl-tRNA synthetase (mitochondrial)(putative) [Homo sapiens] gi|158260381|dbj|BAF82368.1| unnamed protein product [Homo sapiens] gi|312152388|gb|ADQ32706.1| prolyl-tRNA synthetase 2, mitochondrial (putative) [synthetic construct] Length = 475 Score = 236 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 141/438 (32%), Positives = 224/438 (51%), Gaps = 35/438 (7%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 LQ+ D S +LML+ G+I+ S G Y LP +A++ + +I +E G +++ Sbjct: 59 LQDKSDDLTCKSQRLMLQVGLIYPASPGCYHLLPYTVRAMEKLVRVIDQEMQAIGGQKVN 118 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMT-DIFRSHIKSYRNLP 129 +P+L A+LW + R+D GKE+LRL DR+ K GPTHEE +T I SY+ LP Sbjct: 119 MPSLSPAELWQATNRWDLMGKELLRLRDRHGKEYCLGPTHEEAITALIASQKKLSYKQLP 178 Query: 130 FTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F YQ+ KFRDE RPRFG++R REF MKD Y+FD +PE ++ +Y+ + +Y +F++LG Sbjct: 179 FLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSPEAAQQTYSLVCDAYCSLFNKLG 238 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 L + ++A+ G IGG +SHEF + D GE ++ Sbjct: 239 LPFVKVQADVGTIGGTVSHEFQLPVDIGEDRLAICPRC---------------------- 276 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 + A + ++ + +GIEVGH FY GTKYS +A F GK Sbjct: 277 ----SFSANMETLDLSQMNCPACQGPLTKTKGIEVGHTFYLGTKYSSIFNAQFTNVCGKP 332 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA--HDQVCRDACEK 367 +MG YG+G R++AA IE + WP +AP++ LI K +Q + + Sbjct: 333 TLAEMGCYGLGVTRILAAAIEVLSTEDCVRWPSLLAPYQACLIPPKKGSKEQAASELIGQ 392 Query: 368 IYARLSKV----GCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSK-VEIKHR 421 +Y +++ +V DD IG++ A+ G+P +I G + + D E+ + Sbjct: 393 LYDHITEAVPQLHGEVLLDDRTHLTIGNRLKDANKFGYPFVIIAGKRALEDPAHFEVWCQ 452 Query: 422 LTGIREDMSLEEVINYAS 439 TG ++ + V++ + Sbjct: 453 NTGEVAFLTKDGVMDLLT 470 >gi|226313026|ref|YP_002772920.1| prolyl-tRNA synthetase [Brevibacillus brevis NBRC 100599] gi|254782888|sp|C0ZF57|SYP_BREBN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226095974|dbj|BAH44416.1| prolyl-tRNA synthetase [Brevibacillus brevis NBRC 100599] Length = 581 Score = 236 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 125/293 (42%), Positives = 178/293 (60%), Gaps = 4/293 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P L+E P DAEIASHKL+LR GM Q + GIY++LPL ++L + AI+REE Sbjct: 1 MKQSQMLIPTLREVPSDAEIASHKLLLRAGMARQLASGIYTYLPLALRSLHKIQAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N G E+ +P +Q A+LW ++GR+D YG E++RL DR+D+ GPTHEEV+T + R Sbjct: 61 MNNAGGQELLMPAMQPAELWHQTGRWDVYGPELVRLRDRHDRPFALGPTHEEVITSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ KFRDE+RPRFG++R REF+MKDAYSFD + +G ++ M+ + Sbjct: 121 EINSYKKLPINLYQIQTKFRDEVRPRFGLIRCREFIMKDAYSFDTSQDGLDRNFQAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R+GL + A++G IGG ++EF+ L D GE + S++ DF E + Sbjct: 181 YTNIFTRVGLNFRAVEADAGAIGGKGTYEFMALCDIGEDTIAYSEEG-DFAANLEKAEVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 S E AP K D L + ++ A+ I I+ K Sbjct: 240 YKPSAKPATE---APAREKLHTPGIKTIDQLVQALQIEAKQIIKSLIYRVDDK 289 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 109/202 (53%), Gaps = 2/202 (0%) Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSAT 301 L +V + +D+ N D P V RG+EVGH+F GTKYS M AT Sbjct: 368 HLTHVVAGRDFTVSKYADLRNITEGDECPRTGGVIKFARGVEVGHVFKLGTKYSTAMGAT 427 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + +G+ + MG YGIG R +AAVIE ++D GIIWP SVAPF + +I + + Sbjct: 428 YLDENGRSQPMIMGCYGIGVSRTIAAVIEQNNDENGIIWPVSVAPFHVHVIPVNVKVEEQ 487 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 R A E+I L K G +V +DD E+ G +F ADL+G PL++ V K + VE++ R Sbjct: 488 RQASEQITEALRKAGIEVLFDDRPERAGVKFKDADLIGLPLRITVSDKAAQEGTVEVRIR 547 Query: 422 LTGIREDMSLEEVINYASHRFS 443 G D+ L+++++ S Sbjct: 548 KNGETHDVKLDQLVDEVKGILS 569 >gi|47222174|emb|CAG11600.1| unnamed protein product [Tetraodon nigroviridis] Length = 483 Score = 236 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 150/459 (32%), Positives = 229/459 (49%), Gaps = 47/459 (10%) Query: 1 MR----RSKYFLPI-LQENPRD---A---EIASHKLMLRTGMIHQHSKGIYSWLPLGQKA 49 M+ S+ + P L++ +D S +LM + G+IH + G Y +LP ++ Sbjct: 45 MKPTLLVSRLYQPSNLRDVGQDSFLHGEMTCKSQRLMQQAGLIHPSNPGCYYYLPATVRS 104 Query: 50 LDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPT 109 ++ + +I +E G ++ +P+L SA+LW S R+D GKE+LRL DR+ PT Sbjct: 105 VEKLIRVIDQEMQEIGGQKLDMPSLCSAELWKASERWDLMGKELLRLKDRHGGDYCLAPT 164 Query: 110 HEE-VMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPE 168 HEE V T + SY+ LP YQI KFRDE +PRFG++R REF MKD YSFD++ E Sbjct: 165 HEEAVTTLVAHQTSLSYKQLPLLLYQITRKFRDEPKPRFGLLRGREFYMKDMYSFDVSEE 224 Query: 169 GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFM 228 + +Y + +Y R+F RLGL + ++A++G IGG LSHEF + AD GE ++ + Sbjct: 225 AAYQTYESVCQAYTRLFARLGLHCVQVQADTGNIGGKLSHEFQLPADIGEDRLLLCGNCS 284 Query: 229 DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIF 288 F E D V ++GIEVGH F Sbjct: 285 -FAANIETVSSDRT------------------------DCPQCRTGTLVESKGIEVGHTF 319 Query: 289 YFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 Y G KYS +ATF A K +MG +G+G R++AA IE +GI WP +AP++ Sbjct: 320 YLGKKYSSVFNATFSNAQNKLAEAEMGCFGLGVTRILAAAIEVMSTEEGIRWPGLLAPYQ 379 Query: 349 ISLINIKAHDQVCRD--ACEKIYARL-----SKVGCDVFWDDMGE-QIGSQFAVADLLGF 400 + ++ K +V + E++ L G +V DD + IG + A LG+ Sbjct: 380 VCVVPPKKGSKVDKATIIAEELVQTLTVTLPRLRG-EVVLDDRTQMTIGRRLKDASKLGY 438 Query: 401 PLQVIVGSKFVSDSK-VEIKHRLTGIREDMSLEEVINYA 438 P V+VG + + E+ + TG +S E +++ Sbjct: 439 PYVVVVGQGALEEPSRFEVICQQTGATMFLSQEGLLDLL 477 >gi|296117435|ref|ZP_06836023.1| threonyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] gi|295976037|gb|EFG82827.1| threonyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] Length = 642 Score = 236 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 84/438 (19%), Positives = 144/438 (32%), Gaps = 41/438 (9%) Query: 8 LPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + L+E R D ++ L I + + G W P G + + +R Q R G Sbjct: 233 IHQLEEAERRDHRRIGREMGLF--HIQEEAVGQIFWHPKGWRLYSVLQDYMRRAQTRNGY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L LW SG +D Y + M + DK + P + IFR ++SY Sbjct: 291 QEVRTPQLVDRGLWEASGHWDKYRQHMFIATVEDEDKTLALKPMNCPCHVQIFRHGLRSY 350 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R E G+MR R F DA+ F + + Sbjct: 351 RELPLRMAEFGACHRYEPSGALHGIMRVRGFTQDDAHIFCTEEQIADE------------ 398 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + +R S F V Q S D D + Sbjct: 399 ------TARFVRMLSAVYQDLGFEHFRVKFADRPEQRAGSDDTWDRSENALKEACHMAGV 452 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D++ + + ++ + AT+ G Sbjct: 453 EYEHNPGEGAFYGPKLEF---VLRDAIGRDWQCGTLQVDYVMP--------ERLDATYVG 501 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D H + +G+ ++ H G+ +W V S++ Sbjct: 502 EDSARHRPVMLHRAILGSFERFLGILIEQHAGRFPMWLAPVQVVVASIVT------DAEP 555 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L G V D E+I ++ L P+ ++VG K + V ++ Sbjct: 556 YAREVVEKLQAAGVVVEADVRNEKINAKIREHSLARVPVILVVGRKEAEERTVALRRLGG 615 Query: 424 GIREDMSLEEVINYASHR 441 +E + L+E + +H Sbjct: 616 KAQEIVPLDEAVTALAHE 633 >gi|237716078|ref|ZP_04546559.1| threonyl-tRNA synthetase [Bacteroides sp. D1] gi|262407690|ref|ZP_06084238.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_22] gi|294643798|ref|ZP_06721596.1| threonine--tRNA ligase [Bacteroides ovatus SD CC 2a] gi|294808458|ref|ZP_06767211.1| threonine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b] gi|229443725|gb|EEO49516.1| threonyl-tRNA synthetase [Bacteroides sp. D1] gi|262354498|gb|EEZ03590.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_22] gi|292640887|gb|EFF59107.1| threonine--tRNA ligase [Bacteroides ovatus SD CC 2a] gi|294444386|gb|EFG13100.1| threonine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b] Length = 646 Score = 236 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 76/445 (17%), Positives = 148/445 (33%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L KG+ WLP G + +R Q R Sbjct: 230 EYLILLEEAKKRDHRKIGKEMQLFM-FSETVGKGLPMWLPKGTALRLRLQEFLRRIQTRY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + L+V SG Y YGK+ + + P + +I+++ Sbjct: 289 DYQEVITPPIGNKLLYVTSGHYAKYGKDAFQPIHTPEEGEEYFLKPMNCPHHCEIYKNFP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F + + ++ Sbjct: 349 RSYKDLPLRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPEQVKDE-FLRVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + ++ + D + + D + Sbjct: 408 SIVFRSMDFQNFEAQISLR--------------DKVNREKYIGSDDNWEKAEQAIIEACA 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + +E A Y D + D++ ++ ++ Sbjct: 454 EKGLPAKIEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFEL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G+D + H + G+M AV+ GK +W + I + Sbjct: 503 EYMGSDNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LTPEQVVILPISE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + E++ L DD E+IG + ++ P +IVG K + +V ++ Sbjct: 557 KFNEYAEQVKMYLKIHEIRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVSVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M EE + N Sbjct: 617 RQGEGDKGTMKFEEFAKILNEEVQN 641 >gi|121594741|ref|YP_986637.1| threonyl-tRNA synthetase [Acidovorax sp. JS42] gi|166223314|sp|A1W8I6|SYT_ACISJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|120606821|gb|ABM42561.1| Ser-tRNA(Thr) hydrolase [Acidovorax sp. JS42] Length = 639 Score = 236 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 84/442 (19%), Positives = 142/442 (32%), Gaps = 37/442 (8%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L I +HS G W P G V +R G Sbjct: 231 YLHMLEEAEKRDHRKLGRELDLF--HIDEHSPGTVFWHPKGWTLWQEVEQYMRRVYRDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D Y M + + P + IF+ IKSY Sbjct: 289 YQEVKGPQILDKTLWEKTGHWDKYRDNMFT-TESEKRDYALKPMNCPGHILIFKQGIKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F D + F ++ Sbjct: 348 RDLPLRYGEFGQCHRNEPTGGLHGIMRVRGFTQDDGHIFCTEDHILAECTAYT-ALLQKV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G +I + + P S E D + Sbjct: 407 YKDFGFHNIIYKVATRPEARIGSDE-----------------SWDKAEHALMESLRASGC 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I A Y + L D++ + ++ + A + G Sbjct: 450 EFEIAPGDGAFYGPKIEY---TLKDAIGRQWQCGTMQVDFSMP--------ERLDAEYVG 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG H + +G++ ++ H G +W L A CR+ Sbjct: 499 EDGGRHRPVMLHRAIVGSLERFIGILIEEHAGALPVWL--APVQVAVLNITDAQQDYCRE 556 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L G V D E+I + L P ++ G K + V ++ R Sbjct: 557 IAAKLQKALPNQGLRVVTDLRNEKITYKIREHSLQKLPYILVAGDKEKAAGAVAVRARGN 616 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MSL+ ++ + ++ Sbjct: 617 KDLGVMSLDAFVDLIAQDIASK 638 >gi|307719284|ref|YP_003874816.1| threonyl-tRNA synthetase [Spirochaeta thermophila DSM 6192] gi|306533009|gb|ADN02543.1| threonyl-tRNA synthetase [Spirochaeta thermophila DSM 6192] Length = 578 Score = 236 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 148/443 (33%), Gaps = 38/443 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L + + G+ W P G + + RE+ Sbjct: 168 QYLEHLKEVEKRDHRRLGKELDLFSVH-EEAGPGLIYWHPKGARIRLEIENFWREQHLAR 226 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + A LW SG Y + M + + P + I+++ ++S Sbjct: 227 GYEVLYTPHIGKAWLWETSGHLSFYKENMYAPMEVDKSDYYIKPMNCPFHIMIYKTRLRS 286 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + ++ +R E G++R R F DA+ F TPE + + L Sbjct: 287 YRELPLRWAELGTVYRYERSGVLHGLLRVRGFTQDDAHIFC-TPEQIEDEILETLRFSLF 345 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G + + P E + S + Sbjct: 346 MWETFGFSDVKAYLSTRPEKSVGEPE-----------------RWEQATGSLRKAIEREG 388 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D+ K+ D+L + S + F ++ T+ Sbjct: 389 LDYEVDEGGGAFYGPKIDI---KVRDALGREWQTSTIQFD----FNLPERFD----ITYV 437 Query: 304 GADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 ADG+ + +G++ ++ + G +W V I + V Sbjct: 438 DADGREKRPYMVHRALLGSLERFFGILIEHYGGAFPVWLAPVQVVVIPV------SDVFA 491 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++ L + G D +++ ++ A P VIVG + V ++ R Sbjct: 492 GYAQEVVRALREAGVRAEADLSADRMNAKIRKAQQEKIPYAVIVGQREQEGRTVSVRVRG 551 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 R ++L + + R Sbjct: 552 GEQRNGVALGAFVEDVARRMRER 574 >gi|225023763|ref|ZP_03712955.1| hypothetical protein EIKCOROL_00627 [Eikenella corrodens ATCC 23834] gi|224943457|gb|EEG24666.1| hypothetical protein EIKCOROL_00627 [Eikenella corrodens ATCC 23834] Length = 570 Score = 236 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 120/236 (50%), Positives = 160/236 (67%), Gaps = 2/236 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLMLR G+I ++ G+Y+W+P+G + L V A++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMLRAGLIKANASGLYTWMPMGLRVLRKVEAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q ADLW ESGR+D YG E+LR+ DR+D + PT EE++TDI R Sbjct: 61 MNRAGAIELLMPVIQPADLWKESGRWDFYGDELLRITDRHDNTFCFSPTCEELITDIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLT-PEGSKHSYNKMFV 179 I SY+ LP FY IQ KFRDE RPRFGVMR+REF+MKDAYSF + Y M+ Sbjct: 121 EITSYKQLPKNFYHIQTKFRDERRPRFGVMRAREFVMKDAYSFHADYESLVREGYQPMYN 180 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 +Y R+F RLGL P+ A++G IGG SHEF VLA++GE + DF E Sbjct: 181 AYCRVFDRLGLDYRPVAADTGSIGGTGSHEFQVLAESGEDVIAY-SSESDFAANIE 235 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 70/226 (30%), Positives = 115/226 (50%), Gaps = 3/226 (1%) Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVS 278 + ++ + +D +P +D+ N D P+ K Sbjct: 345 KVYADFAVEKLADTVIGANEDDHHYTGFNFGRDSPEPEFADIRNVIAGDPSPDGKGYLKL 404 Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KYS ++A+F +GK ++MG YGIG R+VAA IE ++D +GI Sbjct: 405 ARGIEVGHVFQLRDKYSAALNASFLDNNGKSQIMEMGCYGIGITRIVAAAIEQNNDERGI 464 Query: 339 IWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IW +++APF+ ++ + + R+A +KIYA L+ G DV DD E+ G A ++L Sbjct: 465 IWTNAMAPFQAVIVPMNYKKSEAVREAADKIYAELTAAGVDVLLDDRDERAGVLLADSEL 524 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 LG P ++ +G + + + KVE R +G E ++ E+ + Sbjct: 525 LGIPHRIAIGDRGLKEGKVEYTERRSGETELVAAGEIAAKLKGLLA 570 >gi|73748565|ref|YP_307804.1| threonyl-tRNA synthetase [Dehalococcoides sp. CBDB1] gi|289432591|ref|YP_003462464.1| threonyl-tRNA synthetase [Dehalococcoides sp. GT] gi|123732511|sp|Q3ZXB5|SYT_DEHSC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|73660281|emb|CAI82888.1| threonyl-tRNA synthetase [Dehalococcoides sp. CBDB1] gi|288946311|gb|ADC74008.1| threonyl-tRNA synthetase [Dehalococcoides sp. GT] Length = 582 Score = 236 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 154/442 (34%), Gaps = 40/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + G+ +WLP G + ++E + G Sbjct: 174 YLNMLEEAAKRDHRKLGKELELFSLH-QEIGGGLVNWLPNGAIVRHLIEEFWKKEHLKRG 232 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + DLW SG + Y + M D + + + P + +F++ +SY Sbjct: 233 YDLVYTPHIAKVDLWKTSGHWGFYRENMYSPMDIDGEEYVLKPMNCVYHILMFKNRTRSY 292 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 + LP ++ +R E G+ R R F DA+ F L + K + + Sbjct: 293 KELPIRMAELGTVYRYERSGVLHGLSRVRGFTQDDAHIFCLYDQLEKEVVK-VLDLAKFM 351 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G + + P + D ++ + Sbjct: 352 IDTFGFTKYKVMLSTRP-----------------EKYVGELDKWEYATDILAKALEANQI 394 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + Y D+ E D+L + ++ F ++ + G Sbjct: 395 PYQVDPGEGVFYGPKIDIKFE---DALGRTWQGPTIQVD----FQLPERFD----VSVVG 443 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DGKD V + +G+M + + + G +P ++P ++ +I I + Sbjct: 444 EDGKDQPVAMVHRTVLGSMERFMSCLT---EQYGGAFPAWLSPKQVMVIPIADRH---TE 497 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 EK+ L + V D E + + A L P ++VG K + V ++ R T Sbjct: 498 FAEKLACELREEEVRVEVDSRSETMNQKIRQAQLAKIPYMLVVGDKEIETQSVAVRTR-T 556 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G ++ M E + + Sbjct: 557 GSQQVMPFAEFKSMLLAKIKTK 578 >gi|319957838|ref|YP_004169101.1| ser-tRNA(thr) hydrolase ;threonyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511] gi|319420242|gb|ADV47352.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511] Length = 605 Score = 236 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 80/444 (18%), Positives = 160/444 (36%), Gaps = 39/444 (8%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + +++E R D +L L + G+ WLP G + + I+ R Sbjct: 198 KKWQQMMEEAKRRDHRKLGTELELFM-FNEEAGAGLPFWLPKGARLRSKLEQILWRSHRR 256 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + AD+W SG Y YG+ M L + + + P + IF++ K Sbjct: 257 RGYEPVRGPEILKADMWRTSGHYACYGENM-YLTEIDGQEYGLKPMNCIGHILIFKNSTK 315 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP +++ + R E G++R REF DA+ F TPE K ++ Sbjct: 316 SYRDLPLKYFEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFC-TPEQIKPVVLEVVEFVD 374 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + + G E+ + T + + + + D+ Sbjct: 375 AVMKKFG------------------FEYTMEISTKPEKAIGDDEVWEVATQALKDALDEN 416 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I E A Y DV K+ D++ + ++ F ++ + A Sbjct: 417 GLEYGIDEGGGAFYGPKIDV---KITDAIGRKWQCGTVQVD----FNLPERFDVEYVAE- 468 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + V + +G+ A++ + G+ + + + Sbjct: 469 --DNTRKRPVMIHRAILGSFERFIAILTEHYAGEFPFFIAPTQVIFVPIA------AEHT 520 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++ L + D D + + + +A+ P VIVG + V + V ++ R Sbjct: 521 AYAKELAEALMEREIDSEIYDRNDSLNKRIRLAEKQKVPYVVIVGDEEVKNRSVAVRDRR 580 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 + ++S ++ + S + Sbjct: 581 KKEQYNLSADDFMLQLSKELQEGK 604 >gi|294500903|ref|YP_003564603.1| prolyl-tRNA synthetase [Bacillus megaterium QM B1551] gi|294350840|gb|ADE71169.1| prolyl-tRNA synthetase [Bacillus megaterium QM B1551] Length = 565 Score = 236 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 115/252 (45%), Positives = 163/252 (64%), Gaps = 1/252 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +P L+E P DA+I SH+L+LR G + Q++ G+YS+LPLG++ L V I+REE Sbjct: 1 MRQSSTLIPTLREVPADADIKSHQLLLRAGYMRQNASGVYSFLPLGKRVLQKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G++E+ +P LQ A+LW ESGR+ SYG E++R+ DR+ + G THEEV+T + R Sbjct: 61 MDRAGSVELLMPALQQAELWQESGRWYSYGPELMRMKDRHGREFALGATHEEVITSLLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ KFRDE RPRFG++R REF+MKDAYSF + E Y+KMF + Sbjct: 121 EVKSYKRLPLNLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHASQESLDEVYDKMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GL + A+SG +GG +HEF+VL++ GE + S + E Sbjct: 181 YSRIFERCGLNFRAVIADSGAMGGKDTHEFMVLSEIGEDTIAYSDTSS-YAANVEMAPVV 239 Query: 241 DIISLNSIVEQW 252 + + E+ Sbjct: 240 NTYEKSGEAEKE 251 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 65/192 (33%), Positives = 108/192 (56%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D + D P+ + V +GIEVGH+F GT+YS M AT+ +G++ + Sbjct: 375 FNATYEDFRFIQEGDQSPDGQGVIKFAKGIEVGHVFKLGTRYSEAMGATYLDENGRNQPM 434 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R VAA+ E +D G++WP++V P+++ +I + + R+ EK+Y L Sbjct: 435 IMGCYGIGVSRTVAAIAEQFNDENGLLWPEAVTPYQVHVIPVNVKNDEQRELGEKLYNEL 494 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 +V DD E+ G +FA +DL+G P++V VG + S+ VE+K R TG ++S++ Sbjct: 495 LDNRFEVLLDDRQERAGVKFADSDLIGLPVRVTVGKR-ASEGIVEVKVRKTGESLEVSVD 553 Query: 433 EVINYASHRFSN 444 +++ + Sbjct: 554 NLVSTVKELLAK 565 >gi|288801328|ref|ZP_06406782.1| threonine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039] gi|288331711|gb|EFC70195.1| threonine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039] Length = 654 Score = 236 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 81/445 (18%), Positives = 147/445 (33%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y L I + RD ++ L + KG+ WLP G + + ++R+ Q R Sbjct: 232 EYLLMIEEAKKRDHRKIGKEMELFM-FSDRVGKGMPIWLPKGTELRLRLQDMLRKIQKRF 290 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P L +L+V SG Y Y K+ R + + P + ++F Sbjct: 291 GYQEVMCPVLGGKNLYVTSGHYAHYSKDAFRPITTPEEGEEYMLKPMNCPHHCEVFAWKP 350 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + +R E G+ R R F DA+ F + M Sbjct: 351 RSYKDLPLRISEFGNVYRYEKSGELHGLTRVRAFTQDDAHIFCRPEQVKNEFLRVM---- 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++A I L D + + D D Sbjct: 407 -----------DIIQAVLKIFDFKNFEAQISLRDPNNKEKYIGSDEAWHEAEQAIIDACK 455 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + E A Y D + D++ ++ ++ F Sbjct: 456 EKGLTAKSELGEAAFYGPKLDFM---IKDAIGRRWQLGTIQVDYNLPQRF--------KL 504 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D + + G++ AV+ G +W + I + Sbjct: 505 EYTDEDNQKKTPVMIHRAPFGSLERFTAVLIEHTAGHFPLW------LTPDQVAILPISE 558 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ G DD E+IG + +L P VIVG K ++ V ++ Sbjct: 559 KYNDYAREVARFFDNNGVRATIDDRNEKIGRKIRDNELKRVPYMVIVGEKESAEGLVSMR 618 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M+ +E ++ + + Sbjct: 619 KQGGGEQATMTQQEFVDRVNGEVAE 643 >gi|329961279|ref|ZP_08299445.1| threonine--tRNA ligase [Bacteroides fluxus YIT 12057] gi|328531944|gb|EGF58761.1| threonine--tRNA ligase [Bacteroides fluxus YIT 12057] Length = 646 Score = 236 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 149/445 (33%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L KG+ WLP G + +R Q+R Sbjct: 230 EYLVLLEEAKKRDHRKIGKEMDLFM-FSDTVGKGLPMWLPKGTALRIRLQDFLRRIQSRY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + L++ SG Y YGK+ + + P + I+++ Sbjct: 289 DYQEVMCPPIGNKLLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F + + ++ Sbjct: 349 RSYKDLPLRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDE-FLRVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + ++ + D + D + + Sbjct: 408 SIVFQSMAFENFEAQISLR--------------DKVNRDKYIGSDENWEKAEQAIIEACE 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + VE A Y D + D++ ++ ++ Sbjct: 454 EKGLKAKVEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFQL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GAD + H + G+M AV+ GK +W + I + Sbjct: 503 EYTGADNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LTPDQVAILPISE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L + D+ E+IG + ++ P ++VG K + ++ ++ Sbjct: 557 KFNDYALEVKQLLKQYDIRALVDERNEKIGRKIRDNEMKRIPYMLVVGEKEAENKEIAVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M +EE S N Sbjct: 617 KQGEGDQGTMKIEEFAKKVSEEVRN 641 >gi|149200873|ref|ZP_01877848.1| threonyl-tRNA synthetase [Roseovarius sp. TM1035] gi|149145206|gb|EDM33232.1| threonyl-tRNA synthetase [Roseovarius sp. TM1035] Length = 648 Score = 236 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 80/443 (18%), Positives = 145/443 (32%), Gaps = 45/443 (10%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E RD ++ L + + + G W P G + +R +Q R G Sbjct: 236 YLNFLEEADRRDHRKLGREMDLF--HMQEEAPGQVFWHPNGWTVYTTLQDYMRRQQRRGG 293 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIY-----GPTHEEVMTDIFRS 120 +E++ P + LW SG ++ Y + M + D A P + IF Sbjct: 294 YVEVNTPQVVDRKLWERSGHWEKYQENMFIVEVDEDHAREKAVNALKPMNCPCHVQIFNQ 353 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R E G+MR R F DA+ F T + + + Sbjct: 354 GLKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFC-TEDQIESETARFIT 412 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 I+ LG + + + P S E D + + Sbjct: 413 FLSGIYTDLGFPNFEVLFSTRPDVRAGSDE-----------------VWDKAEAALLSAT 455 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + A Y + L D++ + ++ F + + Sbjct: 456 RAAGIEPKVNPGEGAFYGPKLEF---TLTDAIGRKWQCGTHQVD----FVLPER----LD 504 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + G DG H + +G+ ++ H G+ W S++ Sbjct: 505 ANYIGTDGAKHRPVMLHRAVLGSFERFIGILIEEHAGRLPFWLAPRQVVVASIV------ 558 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D K+ L+ + D E+I + L P+ + G + V D V + Sbjct: 559 SEADDYVTKVAQNLTDLNIRAEADTRNEKINYKVREHSLGKVPVILACGPREVEDGTVSL 618 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + L++V + Sbjct: 619 RRLGEKDSRIVPLDQVAAELARE 641 >gi|257467949|ref|ZP_05632045.1| prolyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185] gi|317062235|ref|ZP_07926720.1| prolyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185] gi|313687911|gb|EFS24746.1| prolyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185] Length = 569 Score = 236 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 150/435 (34%), Positives = 207/435 (47%), Gaps = 49/435 (11%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AE ASHKL+LR MI + + G+Y++LPLG KAL V I+REE Sbjct: 1 MRFSKSYIKTLKETPKEAETASHKLLLRASMIKKLTSGVYTYLPLGYKALKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ +P LQ A+LW ESGR+D G M++L DRN + + GPTHEEV+TD+ R+ Sbjct: 61 MDRAGSQEILMPVLQPAELWKESGRWDVMGPLMMKLQDRNKRDFVLGPTHEEVVTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP + YQIQ KFRDE+RPRFG+MR REF+MKDAYSF T E + M + Sbjct: 121 DISSYKALPLSLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHATAESLDEEFLNMRDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI-------- 232 Y RIF R GLK P+ A+SG IGG S EF VLAD+GE ++ Sbjct: 181 YSRIFSRCGLKFRPVEADSGAIGGSGSQEFHVLADSGEDEIIYCDSCSYAANVETAVSRV 240 Query: 233 ---------PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 +E D ++ ++ IV+ PY+ T + + + V RG Sbjct: 241 EASPVEELKNAELIDTPNVSKIDDIVQFLNIPYSKTVKAMMYRDMGN-DQVYMVLMRGDY 299 Query: 284 VGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESSHDGKGIIWPD 342 + + A + + H + G G G VI + + Sbjct: 300 EVNETKLKNIVNAVEVALLTDEELEKHGLIKGFIGPYGIELGDIKVIADTAVTEINNHTA 359 Query: 343 SVAPFKISLINIKAHDQVCRDACEKIYA------------RL-SKVGCDV---------- 379 IN+ D I +L S G +V Sbjct: 360 GGNKMDTHYINVNYGRDYKADIVADIKTVKVGETCERCGGKLHSARGIEVGHIFKLGDKY 419 Query: 380 -------FWDDMGEQ 387 F DD GE Sbjct: 420 SKALNATFLDDKGES 434 Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 68/189 (35%), Positives = 103/189 (54%), Gaps = 3/189 (1%) Query: 259 TSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ K+ ++ K SARGIEVGHIF G KYS ++ATF G+ + MG Sbjct: 382 VADIKTVKVGETCERCGGKLHSARGIEVGHIFKLGDKYSKALNATFLDDKGESKVMLMGC 441 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R +A+ IE ++D GIIWP ++AP+ + +I ++ E+IY L G Sbjct: 442 YGIGVSRTLASAIEQNNDEFGIIWPTALAPYIVDVIPANVKNEEQVKVAEEIYEALLNDG 501 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D DD E+ G +F ADL+GFP +V+ G + + VE+K R TG ++S ++V++ Sbjct: 502 IDSMIDDRDERPGFKFKDADLIGFPFKVVSGKR-AGEGIVELKIRRTGETLEISKDDVVS 560 Query: 437 YASHRFSNN 445 Sbjct: 561 TVRELMKKY 569 >gi|254429307|ref|ZP_05043014.1| threonyl-tRNA synthetase [Alcanivorax sp. DG881] gi|196195476|gb|EDX90435.1| threonyl-tRNA synthetase [Alcanivorax sp. DG881] Length = 638 Score = 236 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 82/427 (19%), Positives = 148/427 (34%), Gaps = 39/427 (9%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 I + RD + ++ L I Q + G W P G + N+ IR + + G E Sbjct: 236 QIEEAEKRDHRKLAREMGLF--HIQQEAVGSMFWHPKGWRMRQNLENYIRGKMEKGGYQE 293 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 +S P + LW +SG +D YG++M + + K M P + IF+ I SYR+L Sbjct: 294 VSTPQMMDRILWEQSGHWDKYGEDMFTVCTHDHKEMAVKPMNCPGHVQIFKQGITSYRDL 353 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P + FR+E G+MR+R F DA+ F T E ++ Sbjct: 354 PIRLGEFTTLFRNEAHGALHGLMRARSFSQDDAHIFC-TEEQINEETAGFIKMLREVYED 412 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 G S ++ P S E D + + + + Sbjct: 413 FGFDSFRIKFSDRPDNRAGSDE-----------------TWDKAEGALRSAVESLGLECE 455 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 + A Y + L D++ + + ++ F + + A + DG Sbjct: 456 LNPGEGAFYGPKLEF---VLRDAIGRDWQCGTLQVD----FVLPDR----LDAEYVAEDG 504 Query: 308 KDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + +G++ ++ S G +W ++ N + Sbjct: 505 SRQRPVMLHRAVLGSLERFLGILIESTAGHLPLWLAPRPVAICTITN------SADEYAT 558 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + +L G D E+IG + P ++G + ++V I+ + Sbjct: 559 AVQQKLVAAGVPAELDIRNEKIGFKVREHSRAKTPRIWVIGEQEAQQNQVAIRTLGSQAT 618 Query: 427 EDMSLEE 433 E M L+E Sbjct: 619 ETMDLDE 625 >gi|161831126|ref|YP_001597175.1| threonyl-tRNA synthetase [Coxiella burnetii RSA 331] gi|161762993|gb|ABX78635.1| threonyl-tRNA synthetase [Coxiella burnetii RSA 331] Length = 660 Score = 236 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 83/447 (18%), Positives = 148/447 (33%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K +L L+E RD + + K+ L S G W P G + + IR+ Sbjct: 235 KALKAYLYRLEEAEKRDHRLLAKKMDLF--HFQPESPGNVFWHPNGWSIILQMREYIRQI 292 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G E+ P L A LW +SG + +G ++ L + + P IF Sbjct: 293 THKYGYQEVHTPQLIDASLWDKSGHLEKFGDDIFSLPLEP-QQYVIKPMSCPAHVQIFNQ 351 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + + R+E G+MR R F+ DA+ F + + Sbjct: 352 GVKSYRDLPLRYAEFGACHRNEPSGTLHGLMRLRGFVQDDAHIFCTEDQIQSE-VSAFID 410 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + + + P S E A+ + K +P E Sbjct: 411 QLHEVYADFGFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEALNRKGVEWDILPGE---- 466 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 A Y + L D L + ++ G Sbjct: 467 -------------GAFYGPKIEF---SLRDCLGRIWQCGTVQVDFSVPERLG-------- 502 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + DG + +G+ ++ GK +W V +++ Sbjct: 503 AHYIAEDGSKKPPVMIHRAILGSFERFLGILLEESAGKLPLWLAPVQVVVMNIT------ 556 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D + L +G D E+IG + + P V++G + V+D + + Sbjct: 557 DRQADYVGQTVENLQNLGIRAHSDLRNEKIGFKIREHTIARVPYLVVIGDREVADKTLSV 616 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + ++LEE S Sbjct: 617 RALEDEASTTITLEEFARQLKAEISQR 643 >gi|87121381|ref|ZP_01077270.1| prolyl-tRNA synthetase [Marinomonas sp. MED121] gi|86163224|gb|EAQ64500.1| prolyl-tRNA synthetase [Marinomonas sp. MED121] Length = 575 Score = 236 bits (601), Expect = 8e-60, Method: Composition-based stats. Identities = 122/235 (51%), Positives = 160/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L+ P DA + SHKLM+R GMI Q SKG+Y+WLP G K V I+REE Sbjct: 1 MRASNYLFSTLRNPPTDAVVTSHKLMMRAGMIRQVSKGLYTWLPTGLKVFRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q +LW ESGR+ YG E+LR+ DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MQRAGALEIIMPGVQPKELWEESGRWQEYGPELLRIKDRHERDYCLGPTHEEVVTDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP +QIQ KFRDE+RPRFGVMRSREF+MKDAYSF +PE + +Y+ M + Sbjct: 121 EISSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFMMKDAYSFHSSPESLQTTYDVMHEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y ++F R+GL P+RA++G IGG SHEF VLA++GE + S DF E Sbjct: 181 YCKVFDRVGLNYRPVRADTGSIGGAFSHEFHVLAESGEDDIAFSDS-SDFAANIE 234 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 76/189 (40%), Positives = 110/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ K V RGIEVGHIF G KY+ ++A +GK + MG Sbjct: 387 EVADIRNVVAGDPSPDGKGVIEIKRGIEVGHIFQLGQKYADALNANVLDENGKAQTMWMG 446 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSK 374 YGIG RVVAA IE + D KGI+WPD++APF++S++ +K + R+ ++IYA L Sbjct: 447 CYGIGVSRVVAAAIEQNFDDKGILWPDAIAPFQVSIVAMKYEKSEAVREQADRIYAELQA 506 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV DD G +FA A+LLG P +V++ K + +E KHR TG +D+SL+ + Sbjct: 507 AGVDVMLDDRKASPGVKFADAELLGIPHRVVISDKGLEKGTIEYKHRRTGDNDDLSLDSL 566 Query: 435 INYASHRFS 443 + R + Sbjct: 567 VKTLISRLN 575 >gi|332528434|ref|ZP_08404426.1| prolyl-tRNA synthetase [Hylemonella gracilis ATCC 19624] gi|332042113|gb|EGI78447.1| prolyl-tRNA synthetase [Hylemonella gracilis ATCC 19624] Length = 581 Score = 236 bits (601), Expect = 8e-60, Method: Composition-based stats. Identities = 115/237 (48%), Positives = 158/237 (66%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++ + L+E P DAE+ SH+LM R GMI + GIY+++P+G + ++ V AI+REE Sbjct: 1 MKASQFLISTLKEAPADAEVVSHQLMTRAGMIKKLGAGIYTYMPMGLRVINKVAAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+++P +Q A+LW E+GR++ G E+LR+ DR+++ + PT EEV+TDI R Sbjct: 61 MNRAGAIELTMPVIQPAELWQETGRFEKMGPELLRIQDRHERDFVVQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 KSY+ LP YQIQ KFRDE RPRFG+MR REF+MKDAYSFD P ++ SY M + Sbjct: 121 EFKSYKQLPRNLYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDPASAQISYQAMAQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y F R GL+ + A+SG IGGDLS EF V+A TGE + D+ E Sbjct: 181 YRAAFDRFGLRYRAVAADSGAIGGDLSEEFQVIAATGEDAIIYCPT-SDYAANIEKA 236 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 77/190 (40%), Positives = 109/190 (57%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A +D+ N D P+ K V RGIE+GHIFY GTKYS M+ATF +GK + +M Sbjct: 391 ALVADLRNVVEGDLSPDGKGVLAIERGIEIGHIFYLGTKYSKAMNATFLDENGKPQFFEM 450 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLS 373 G YGIG R+ AA IE +HD KGIIWPD++APF + + I + A EK+YA L Sbjct: 451 GCYGIGITRLPAAAIEQNHDAKGIIWPDAIAPFTVVVCPINPDRSPEVKTAAEKLYAELL 510 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G DV DD GE+ G+ FA +L+G P +V +G + + + KVE +HR +++ + Sbjct: 511 AAGVDVILDDRGERPGAMFADWELIGVPHRVTIGDRTLKEGKVEYQHRRDAEATPLAVGD 570 Query: 434 VINYASHRFS 443 + + Sbjct: 571 AAAFVLGKLK 580 >gi|196247600|ref|ZP_03146302.1| Proline--tRNA ligase [Geobacillus sp. G11MC16] gi|196212384|gb|EDY07141.1| Proline--tRNA ligase [Geobacillus sp. G11MC16] Length = 271 Score = 236 bits (601), Expect = 8e-60, Method: Composition-based stats. Identities = 119/235 (50%), Positives = 164/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ F+P +E P DAE+ SH+L+LR G + Q + G+Y++LPLGQ+ L V AIIREE Sbjct: 1 MRQSQGFIPTFREVPADAEVKSHQLLLRAGFVRQSASGVYTFLPLGQRVLQKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P LQ A+LW +SGR+ SYG E++RL DR+++ + GPTHEE++T I R Sbjct: 61 MNRAGALELLMPALQPAELWQQSGRWYSYGPELMRLKDRHERDFVLGPTHEEMITTIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +K+Y+ LP YQIQ KFRDE RPRFG++R REF+MKDAYSF + E +YNKM+ + Sbjct: 121 EVKTYKRLPLILYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHTSQESLDETYNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YANIFRRCGLNFRAVIADSGAMGGKDTHEFMVLSDIGEDTIAYSD-ASDYAANIE 234 >gi|332983243|ref|YP_004464684.1| prolyl-tRNA synthetase [Mahella australiensis 50-1 BON] gi|332700921|gb|AEE97862.1| prolyl-tRNA synthetase [Mahella australiensis 50-1 BON] Length = 569 Score = 236 bits (601), Expect = 8e-60, Method: Composition-based stats. Identities = 120/269 (44%), Positives = 166/269 (61%), Gaps = 1/269 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F L+E P +AEI SH+LMLR G++ + + GIY++LPLG++ L V I+REE Sbjct: 1 MKMSEMFFTTLRETPSEAEIPSHQLMLRAGLMRKLASGIYNYLPLGKRVLKKVEEIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++TGA E+ L A+LW E+GR+D +G EM +L DRN++ GPTHEE+ TDI R+ Sbjct: 61 MDKTGAQEILASALLPAELWKETGRWDVFGPEMFKLKDRNEREFCLGPTHEEIFTDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LPF YQIQ K+RDE RPRFGVMRSREF+MKDAYSFD +G SY KM+ + Sbjct: 121 EIKSYKQLPFNLYQIQTKYRDEKRPRFGVMRSREFIMKDAYSFDKDWDGLDISYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R LK + A++G +GG S+EF+V +D GE +V + + E Sbjct: 181 YCAIFDRCDLKYWVVDADTGAMGGKDSNEFMVSSDVGEAEVAYCDEC-GYAANIEKAPCV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFD 269 + E+ A ++L Sbjct: 240 NRPIHAEEAEKEIKKVATPDVKTVDELMH 268 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 68/188 (36%), Positives = 103/188 (54%), Gaps = 3/188 (1%) Query: 258 ATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N ++ D P+ + RGIEVGHIF GTKY+ + AT+ +G++ + MG Sbjct: 379 VVADIRNIEVGDPCPKCGKPINIARGIEVGHIFKLGTKYTEALGATYLDENGQEQPIIMG 438 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R VAA+IE HD +GIIWP SV P+ + ++ + A EKI+ L Sbjct: 439 CYGIGINRTVAAIIEQHHDDRGIIWPMSVTPYHVIIVVASNYQPEQIQAAEKIHYELVSR 498 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G +F ADL+G P+++ VG K +S VE K R D+ + +++ Sbjct: 499 GIEVLLDDRDERAGVKFNDADLIGIPIRITVGKK-ISAGMVEFKRRDKADSIDIPVSDIV 557 Query: 436 NYASHRFS 443 + Sbjct: 558 DKVIAEIK 565 >gi|325473136|gb|EGC76332.1| threonyl-tRNA synthetase [Treponema denticola F0402] Length = 585 Score = 236 bits (601), Expect = 8e-60, Method: Composition-based stats. Identities = 80/441 (18%), Positives = 157/441 (35%), Gaps = 38/441 (8%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD + L I + + G W P G + +R+ G Sbjct: 174 YLAMLEEAEKRDHRKVGKAMNLF--HIDEENPGQVFWHPKGWTLYLTIQNYVRKRIKEDG 231 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + Y + M + + + P + +IF+ IKSY Sbjct: 232 YLEVHTPFVMPRSLWERSGHWAKYKENMF-ITESEKRLFALKPMNCPGHVEIFKQGIKSY 290 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 ++LP + R+E G+MR R F+ DA+ F + S +K R+ Sbjct: 291 KDLPLRLAEFGSCTRNEPSGSLHGIMRIRGFVQDDAHIFCTEEQISSE-VSKFCALLKRM 349 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + +V T Q D + + D Sbjct: 350 YADFGF---------------AEDKILVKFSTRPEQRVGDDATWDRAEKALSDACADAGL 394 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK- 303 I E A Y + L D+L + ++ + ++A + Sbjct: 395 KYEIAEGEGAFYGPKLEF---TLIDALGREWQCGTIQLDYQLP------SAERLNAEYIG 445 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + K H V + +G++ ++ + G W V + + + Sbjct: 446 DDNNKHHPVMLHRAVLGSLERFIGILIENCAGIMPPWLAPVQAVIVPVAP------AFNE 499 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +K+ L + G V D +++ ++ Q+IVG + ++ V ++ R Sbjct: 500 YAQKVQKVLDEKGFRVIADIGTDRMNAKIRKHQEEKVIYQLIVGQSEMDNNSVAVRMRKG 559 Query: 424 GIREDMSLEEVINYASHRFSN 444 G ++ M+L+E I++ + + Sbjct: 560 G-QKVMTLDEFISFLKDKVDS 579 >gi|291286279|ref|YP_003503095.1| prolyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809] gi|290883439|gb|ADD67139.1| prolyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809] Length = 570 Score = 235 bits (600), Expect = 8e-60, Method: Composition-based stats. Identities = 129/241 (53%), Positives = 164/241 (68%), Gaps = 1/241 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKYF+P L+E P DAE+ SHKLM R GMI + + GIYS+LPLG + V I+R+ Sbjct: 1 MRYSKYFIPTLREVPADAEVVSHKLMARAGMIKKVASGIYSYLPLGLVVIKKVEDIVRKC 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N A+E+ +P++Q A+LW ESGR+D YGKE+LR+ DR+++ YGPTHEEV TDI RS Sbjct: 61 MNEADAVELMMPSVQPAELWQESGRWDFYGKELLRIKDRHNREFCYGPTHEEVTTDIIRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ G+ SY KM+ + Sbjct: 121 YINSYKALPVNLYQIQTKFRDEVRPRFGLMRGREFIMKDAYSFDMDDAGANISYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF GL+ + A+SG IGG SHEF+VLA TGE V D+ E Sbjct: 181 YRRIFEMCGLRYKVVDADSGAIGGSFSHEFMVLASTGEDFVISCNSC-DYSANVEKATVR 239 Query: 241 D 241 Sbjct: 240 K 240 Score = 176 bits (445), Expect = 9e-42, Method: Composition-based stats. Identities = 73/191 (38%), Positives = 106/191 (55%), Gaps = 2/191 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + + D N + D E +GIEVGHIF GTKYS M+A + DGK Sbjct: 376 FESVDDFRNAEAGDVCCECGGTYEITKGIEVGHIFKLGTKYSSSMNAMYLDKDGKRKPFV 435 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG RVVAA IE +HD KGI+WP ++APFKI ++ + DQ + E IY L Sbjct: 436 MGCYGIGITRVVAAAIEQNHDEKGIVWPVNLAPFKICVLPLAMKDQEVSETAENIYKDLI 495 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G +V DD E+ G +F A+L+G PL+V++G K ++ K+E+ R +G ++ +E Sbjct: 496 NKGVEVLLDDRDERPGVKFNDAELIGIPLRVVIGKKTLAQGKIEVTVRASGESYEVDVEG 555 Query: 434 VINYASHRFSN 444 ++ + Sbjct: 556 CVDVLLQKLEE 566 >gi|239817181|ref|YP_002946091.1| prolyl-tRNA synthetase [Variovorax paradoxus S110] gi|259511631|sp|C5CXW9|SYP_VARPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|239803758|gb|ACS20825.1| prolyl-tRNA synthetase [Variovorax paradoxus S110] Length = 581 Score = 235 bits (600), Expect = 8e-60, Method: Composition-based stats. Identities = 120/237 (50%), Positives = 163/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ASH+LM+R GMI + GIY+++P+G + + V AI+REE Sbjct: 1 MKASRFFVSTLKEAPADAEVASHRLMMRAGMIKKLGTGIYTYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+++P +Q A+ W E+GR+D G E+LR+ DR+D+ + PT EEV+TDI R Sbjct: 61 MNRAGAVELTMPVVQPAEFWQETGRFDKMGPELLRIKDRHDRDFVVQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE RPRFG+MR REF+MKDAYSFD + +K SY M + Sbjct: 121 EIRSYKQLPKNFYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDLDAAKASYQAMADA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R GL+ + A+SG IGGDLS EF V+A TGE + D+ E Sbjct: 181 YRRIFDRFGLRYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYC-PGSDYAANMEKA 236 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 69/188 (36%), Positives = 108/188 (57%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D+ P+ K V RGIEVGH+F GTKYS M+AT+ GK +++MG Sbjct: 393 VADLRNVVAGDASPDGKGVLAIERGIEVGHVFVLGTKYSKDMNATYLDEAGKPQFLEMGC 452 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKV 375 YGIG R+ AA IE +HD +GIIWPD++APF + + I + A E +Y +L Sbjct: 453 YGIGITRLPAAAIEQNHDERGIIWPDALAPFTVVVCPIGMDRSPEVKVAAEALYEQLLAA 512 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD GE+ G+ FA +L+G P +V++ + + + ++E +HR + + Sbjct: 513 GVDVLLDDRGERPGAMFADWELIGVPHRVVISDRGLKEGQLEYQHRRDTAATKVPAAGIA 572 Query: 436 NYASHRFS 443 + + +F+ Sbjct: 573 EFIAGKFA 580 >gi|222110646|ref|YP_002552910.1| threonyl-tRNA synthetase [Acidovorax ebreus TPSY] gi|254783520|sp|B9MHX8|SYT_DIAST RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|221730090|gb|ACM32910.1| threonyl-tRNA synthetase [Acidovorax ebreus TPSY] Length = 639 Score = 235 bits (600), Expect = 8e-60, Method: Composition-based stats. Identities = 84/444 (18%), Positives = 143/444 (32%), Gaps = 37/444 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD +L L I +HS G W P G V +R Sbjct: 229 QQYLHMLEEAEKRDHRKLGRELDLF--HIDEHSPGTVFWHPKGWTLWQEVEQYMRRVYRD 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW ++G +D Y M + + P + IF+ IK Sbjct: 287 NGYQEVKGPQILDKTLWEKTGHWDKYRDNMFT-TESEKRDYALKPMNCPGHILIFKQGIK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + + R+E G+MR R F D + F Sbjct: 346 SYRDLPLRYGEFGQCHRNEPTGGLHGIMRVRGFTQDDGHIFCTEDHILAECTAYT-ALLQ 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +++ G +I + + P S E D + Sbjct: 405 KVYKNFGFHNIIYKVATRPEARIGSDE-----------------SWDKAEHALMESLRAS 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I A Y + L D++ + ++ + A + Sbjct: 448 GCEFEIAPGDGAFYGPKIEY---TLKDAIGRQWQCGTMQVDFSMP--------ERLDAEY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DG H + +G++ ++ H G +W L A C Sbjct: 497 VGEDGGRHRPVMLHRAIVGSLERFIGILIEEHAGALPVWL--APVQVAVLNITDAQQDYC 554 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 R+ K+ L G V D E+I + L P ++ G K + V ++ R Sbjct: 555 REIAAKLQKALPNQGLRVVTDLRNEKITYKIREHSLQKLPYILVAGDKEKAAGAVAVRAR 614 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 MSL+ ++ + ++ Sbjct: 615 GNKDLGVMSLDAFVDLIAQDIASK 638 >gi|295706249|ref|YP_003599324.1| prolyl-tRNA synthetase [Bacillus megaterium DSM 319] gi|294803908|gb|ADF40974.1| prolyl-tRNA synthetase [Bacillus megaterium DSM 319] Length = 565 Score = 235 bits (600), Expect = 8e-60, Method: Composition-based stats. Identities = 116/252 (46%), Positives = 163/252 (64%), Gaps = 1/252 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +P L+E P DA+I SH+L+LR G + Q+S G+YS+LPLG++ L V I+REE Sbjct: 1 MRQSSTLIPTLREVPADADIKSHQLLLRAGYMRQNSSGVYSFLPLGKRVLQKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G++E+ +P LQ A+LW ESGR+ SYG E++R+ DR+ + G THEEV+T + R Sbjct: 61 MDRAGSVELLMPALQQAELWQESGRWYSYGPELMRMKDRHGREFALGATHEEVITSLLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ KFRDE RPRFG++R REF+MKDAYSF + E Y+KMF + Sbjct: 121 EVKSYKRLPLNLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHASQESLDEVYDKMFAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GL + A+SG +GG +HEF+VL++ GE + S + E Sbjct: 181 YSRIFERCGLNFRAVIADSGAMGGKDTHEFMVLSEIGEDTIAYSDTSS-YAANVEMAPVV 239 Query: 241 DIISLNSIVEQW 252 + + E+ Sbjct: 240 NTYEKSGEAEKE 251 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 65/192 (33%), Positives = 107/192 (55%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D + D P+ + V +GIEVGH+F GT+YS M AT+ +G+ + Sbjct: 375 FNATYEDFRFIQEGDQSPDGQGVIKFAKGIEVGHVFKLGTRYSEAMGATYLDENGRSQPM 434 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R VAA+ E +D G++WP++V P+++ +I + + R+ EK+Y L Sbjct: 435 IMGCYGIGVSRTVAAIAEQFNDENGLLWPEAVTPYQVHVIPVNVKNDEQRELGEKLYNEL 494 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 +V DD E+ G +FA +DL+G P++V VG + S+ VE+K R TG ++S++ Sbjct: 495 LDNRFEVLLDDRQERAGVKFADSDLIGLPVRVTVGKR-ASEGIVEVKVRKTGESLEVSVD 553 Query: 433 EVINYASHRFSN 444 +++ + Sbjct: 554 NLVSTVKELLAK 565 >gi|323137534|ref|ZP_08072611.1| threonyl-tRNA synthetase [Methylocystis sp. ATCC 49242] gi|322397160|gb|EFX99684.1| threonyl-tRNA synthetase [Methylocystis sp. ATCC 49242] Length = 643 Score = 235 bits (600), Expect = 8e-60, Method: Composition-based stats. Identities = 78/429 (18%), Positives = 147/429 (34%), Gaps = 37/429 (8%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E R D ++ L + G W P G + + +R Q G Sbjct: 232 YLHRLEEAERRDHRRLGREMDLF--HFQEEGPGAIFWHPKGWTLFQTLVSYMRRRQKAAG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E++ P + LW SG + +Y + M +++ P + IF++ +KSY Sbjct: 290 YTEVNTPQVLDRALWETSGHWQTYRENMFVTKTEDERIFALKPMNCPGHVQIFKNGLKSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R E G+MR R F DA+ F + + L I Sbjct: 350 RDLPVKIAEFGVVHRYEPSGALHGMMRVRAFTQDDAHIFCSEDQIMDEALKIN-DLILTI 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + ++ + P S E A+ +V + T Sbjct: 409 YRDFGFDDVVVKLSTRPEKRVGSDEAWDKAEAALGKVL-----DELARRGLKTSIQ---- 459 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y + L D++ + ++ FG A + G Sbjct: 460 -----EGEGAFYGPKLEY---TLRDAIGREWQCGTTQVDFNLPVRFG--------AFYIG 503 Query: 305 -ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 K V + G++ ++ G +W + ++ Q D Sbjct: 504 ADSDKKIPVMIHRAMFGSLERFTGILIEHFAGHLPLWLSPLQIVICTIT------QEADD 557 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ A K+G +V D E+I + L P+ ++ G K ++ + I+ + Sbjct: 558 YAYEVAAAARKLGLNVDIDARNEKITYKVREHSLAKVPVLLVAGKKEAAERTISIRRLGS 617 Query: 424 GIREDMSLE 432 + M ++ Sbjct: 618 QQQTQMGID 626 >gi|330819285|ref|YP_004348147.1| threonyl-tRNA synthetase [Burkholderia gladioli BSR3] gi|327371280|gb|AEA62635.1| threonyl-tRNA synthetase [Burkholderia gladioli BSR3] Length = 682 Score = 235 bits (600), Expect = 8e-60, Method: Composition-based stats. Identities = 71/435 (16%), Positives = 144/435 (33%), Gaps = 39/435 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + Q RD +L L + + G W P G + A +R Q +E Sbjct: 253 RLEQAERRDHRRLGRELDLF--HFQEDAPGAVFWHPRGWTVFRELIAYMRRRQEEAAYVE 310 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 ++ P + LW SG + +Y M A + +++ P + ++R +KSYR+L Sbjct: 311 VNSPDVMDRSLWEISGHWLNYRDHMFTTATEDGRSLALKPMNCPGSVLLYRHGLKSYRDL 370 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P + R E G++R R F DA+ + TP + L I+ + Sbjct: 371 PIRMGEFGKVHRYEPSGALHGLLRVRHFTQDDAHIYC-TPAQMDQECRAVVALVLDIYRQ 429 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 G + + ++ + P + D + D + Sbjct: 430 FGFEEVRIKLSTRPANR-----------------MGDEATWDRLEGALVNALDAMGLDYR 472 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 + A Y + L D++ + + +++ FG + DG Sbjct: 473 LNPGEGAFYGPKLEF---VLRDAIGRDWQCGTLQVDMNLPERFG--------IEYVDEDG 521 Query: 308 KDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + + G++ ++ + P +AP + +++I + D Sbjct: 522 QRKRPVMLHRALFGSLERFIGILI---EHHAGKLPPWLAPVQAMVLSI---SEEHADYAR 575 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + L+ G D E+IG + L P ++ G++ + I+ R Sbjct: 576 NVAQWLAASGLRAEADLRREKIGYKIREQTLQRIPFLLVAGTRERETGSIAIRSRGGLDL 635 Query: 427 EDMSLEEVINYASHR 441 + L + + Sbjct: 636 GTLPLAQAVALLVDE 650 >gi|319405749|emb|CBI79372.1| Threonyl-tRNA synthetase [Bartonella sp. AR 15-3] Length = 654 Score = 235 bits (600), Expect = 9e-60, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 151/445 (33%), Gaps = 39/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD ++ L + S G+ W P G K N+ + +R + Sbjct: 233 KAYLHMLEEAEKRDHRRLGREMDLF--HFQEESPGMIFWHPKGWKMFQNLISYMRRRLDN 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-----MIYGPTHEEVMTDIF 118 E+ P + LW SG ++ Y + M + D P + IF Sbjct: 291 HKYAEVQAPQVLDKSLWEISGHWEWYKENMFKTIPAADDWNNEHIYALKPMNCPGHVQIF 350 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + L R E G+MR R F DA+ F + + + Sbjct: 351 KHGLKSYRDLPIRLAEFGLVHRYEPSGSLHGLMRVRSFTQDDAHIFCTEEQLADECLSIN 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L + G K I ++ + P S E A++ T V + E Sbjct: 411 -DLILSTYADFGFKEISIKLSTRPEKRVGSDELWDHAESIMTFVLKT---------IEKK 460 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + SI+ A Y + L D++ + ++ FG Sbjct: 461 FSGRVKI--SILPGEGAFYGPKFEY---TLTDAIGREWQCGTTQVDFNLPERFG------ 509 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + D + + G+M ++ + G W ++ Sbjct: 510 --AFYIDKDSEKRQPVMIHRAIFGSMERFLGILIENFSGHIPFWLAPQQIVVATIT---- 563 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + +KI +L +G D E+I + L P+ ++ G + + V Sbjct: 564 --SDSNEYAKKITEKLKAIGLLATLDSRNEKINYKIREHFLQKIPVILVCGKREAETNSV 621 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + + + +E+V Sbjct: 622 NMRRLGSVKQTFLPIEKVFQQLLDE 646 >gi|269101961|ref|ZP_06154658.1| prolyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP 102761] gi|268161859|gb|EEZ40355.1| prolyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP 102761] Length = 572 Score = 235 bits (600), Expect = 9e-60, Method: Composition-based stats. Identities = 119/277 (42%), Positives = 165/277 (59%), Gaps = 5/277 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAEI SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEIISHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHARPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY+ M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKEGLQKSYDAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN---- 236 Y + F R+GL+ P+ A+SG IGG+ S EF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLEYRPVWADSGAIGGNGSQEFHVLAESGEDLIAF-STESDYAANIEKAEAL 239 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + + P A T D E+ ++ + Sbjct: 240 APAHDRAAPTVELSVIDTPNAKTIDELVEQHGIAIEK 276 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 68/195 (34%), Positives = 118/195 (60%), Gaps = 3/195 (1%) Query: 253 TAPYAATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 D+ N D + + RGIEVGHIF GT YS M+ ++GK+ Sbjct: 378 DVALGRVEDLRNVVEGDPSPCGQGTLMLKRGIEVGHIFQLGTTYSEKMNCGVLDSNGKNV 437 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIY 369 ++MG YGIG RVVA+ IE ++D GIIWPD++APF++S++ + + ++A EK+Y Sbjct: 438 ILEMGCYGIGVSRVVASAIEQNNDENGIIWPDAIAPFQVSIVPMNMAKSEEVKEAAEKLY 497 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 A L+ G DV +DD E+ G FA +L+G P +++G++ + + ++E K+R TG +E++ Sbjct: 498 ADLTAAGIDVLFDDRKERPGVMFADHELIGIPHTIVIGNRSLENGEMEYKNRRTGTKENV 557 Query: 430 SLEEVINYASHRFSN 444 ++ +++ + + + +N Sbjct: 558 AVTDIVAFVTSKLAN 572 >gi|306841798|ref|ZP_07474483.1| threonyl-tRNA synthetase [Brucella sp. BO2] gi|306288128|gb|EFM59518.1| threonyl-tRNA synthetase [Brucella sp. BO2] Length = 661 Score = 235 bits (600), Expect = 9e-60, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 152/445 (34%), Gaps = 40/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD ++ L + G+ W G K N+ + +R + Sbjct: 236 QAYLHMLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 293 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 294 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 353 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F + + Sbjct: 354 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRIN 413 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G + I ++ + P S E A++ V E Sbjct: 414 -DLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVL------------EQI 460 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I+ A Y + L D++ + ++ FG Sbjct: 461 RQQSNNIKTGILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------ 511 Query: 298 MSATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G K V + G+M ++ + G +W V ++ Sbjct: 512 --AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATIT---- 565 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + ++ A+L G V D E+I + L P+ ++ G + + V Sbjct: 566 --SDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHSLQKVPVILVCGKREAEEKTV 623 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + +E M+L+E I Sbjct: 624 NMRRLGSRDQESMTLDEAIARLCEE 648 >gi|294664482|ref|ZP_06729831.1| prolyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605740|gb|EFF49042.1| prolyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 621 Score = 235 bits (600), Expect = 9e-60, Method: Composition-based stats. Identities = 115/223 (51%), Positives = 152/223 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 58 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 117 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 118 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYSPTAEEAAAEFARQ 177 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT E Y+ M + Sbjct: 178 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDEDMAREYDNMRAA 237 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC 223 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE + Sbjct: 238 YTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGEDSLAF 280 Score = 107 bits (266), Expect = 5e-21, Method: Composition-based stats. Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 1/166 (0%) Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 + ARGIEVGH+F G++Y+ + AT GK ++MG YGIG R+VAA IE +H Sbjct: 454 GELRLARGIEVGHVFQLGSQYAQALQATVIDEGGKAAVMKMGCYGIGISRIVAAAIEQNH 513 Query: 334 DGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 D GIIWP +AP+++ + I D A + + +L G D DD G + G+ F Sbjct: 514 DDAGIIWPAPMAPWQVVVCVINPKQDPQVLAAAQALLDQLLAAGLDAALDDRGLRPGAMF 573 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 A +LLG P +V+V + ++ E + R E + + + Sbjct: 574 ADMELLGIPHRVVVSERGLAAGTFEYRARTADAAESLDKAGLFSRL 619 >gi|294625222|ref|ZP_06703863.1| prolyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600496|gb|EFF44592.1| prolyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 621 Score = 235 bits (600), Expect = 9e-60, Method: Composition-based stats. Identities = 115/223 (51%), Positives = 152/223 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 58 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 117 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 118 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYSPTAEEAAAEFARQ 177 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT E Y+ M + Sbjct: 178 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDEDMAREYDNMRAA 237 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC 223 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE + Sbjct: 238 YTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGEDSLAF 280 Score = 107 bits (266), Expect = 5e-21, Method: Composition-based stats. Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 1/166 (0%) Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 + ARGIEVGH+F G++Y+ + AT GK ++MG YGIG R+VAA IE +H Sbjct: 454 GELRLARGIEVGHVFQLGSQYAQALQATVIDEGGKAAVMKMGCYGIGISRIVAAAIEQNH 513 Query: 334 DGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 D GIIWP +AP+++ + I D A + + +L G D DD G + G+ F Sbjct: 514 DDAGIIWPAPMAPWQVVVCVINPKQDPQVLAAAQALLDQLLAAGLDAALDDRGLRPGAMF 573 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 A +LLG P +V+V + ++ E + R E + + + Sbjct: 574 ADMELLGIPHRVVVSERGLAAGTFEYRARTADAAESLDKAGLFSRL 619 >gi|221194513|ref|ZP_03567570.1| prolyl-tRNA synthetase [Atopobium rimae ATCC 49626] gi|221185417|gb|EEE17807.1| prolyl-tRNA synthetase [Atopobium rimae ATCC 49626] Length = 571 Score = 235 bits (600), Expect = 9e-60, Method: Composition-based stats. Identities = 115/260 (44%), Positives = 163/260 (62%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + S + P L+E+P +A +ASH+L+LR GMI + + G+YS+LPL ++L + IIR+E Sbjct: 6 KMSSLYAPTLKEDPAEAVLASHRLLLRAGMIRKTAAGLYSYLPLAWRSLRKIEEIIRDEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ VP L A+LW ESGR+D YG E++RL DR+++ GPTHEE TD+ R+ Sbjct: 66 DGIGAQEILVPILTPAELWEESGRWDVYGPELMRLHDRHERKFALGPTHEETFTDLVRNE 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +KSY+ LP T YQIQ KFRDE+RPRFG+MR REF+MKDAYSF T E + Y+ +Y Sbjct: 126 LKSYKQLPVTLYQIQDKFRDEMRPRFGLMRGREFIMKDAYSFSSTQESLQECYDAEKGAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RI R G++++P+ A+SG IGGD S EF+ LAD GE + + Sbjct: 186 ARICERTGIRALPVIADSGQIGGDTSVEFMALADAGEAALVYCDCGYAADTEAATVKVHV 245 Query: 242 IISLNSIVEQWTAPYAATSD 261 +E+ P +T + Sbjct: 246 EEGTAGELEKVATPEVSTIE 265 Score = 162 bits (411), Expect = 8e-38, Method: Composition-based stats. Identities = 72/193 (37%), Positives = 106/193 (54%), Gaps = 2/193 (1%) Query: 258 ATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 A DV + D P + RGIEV +F GTKYS + ATF DG + MG Sbjct: 379 AWVDVVTAREGDLCPTCGQPLHEARGIEVSQVFQLGTKYSEALGATFTAEDGTEQPFLMG 438 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R++AAV+E +D GIIWP VAP+++ ++ + D +++ + Sbjct: 439 CYGIGVSRLLAAVVEQHNDEHGIIWPVCVAPYEVEIVPLSVGDDTVWPVAKQLADSFVEA 498 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G + DD E+ G +FA ADL+G P QVIVG + V++ E+K+R TG R D++L+EV Sbjct: 499 GLETVVDDRDERPGVKFADADLIGLPWQVIVGKRGVANGVAEVKNRETGERVDVALDEVA 558 Query: 436 NYASHRFSNNRPV 448 + R + R + Sbjct: 559 AWLVSRIAPLRQL 571 >gi|21109942|gb|AAM38410.1| prolyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306] Length = 583 Score = 235 bits (600), Expect = 9e-60, Method: Composition-based stats. Identities = 115/223 (51%), Positives = 152/223 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 20 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 79 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 80 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYSPTAEEAAAEFARQ 139 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT E Y+ M + Sbjct: 140 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDEDMAREYDNMRAA 199 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC 223 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE + Sbjct: 200 YTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGEDSLAF 242 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 1/193 (0%) Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 + P + + + + ARGIEVGH+F G++Y+ + AT Sbjct: 389 NWGRDLPEPETVADVRNVVEGERAADGGELRLARGIEVGHVFQLGSQYAQALQATVIDEG 448 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDAC 365 GK ++MG YGIG R+VAA IE +HD GIIWP +AP+++ + I D A Sbjct: 449 GKAAVMKMGCYGIGISRIVAAAIEQNHDDAGIIWPAPMAPWQVVVCVINPKQDPQVLAAA 508 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 + + +L G D DD G + G+ FA +LLG P +V+V + ++ E + R Sbjct: 509 QALLDQLLAAGLDAALDDRGLRPGAMFADMELLGIPHRVVVSERGLAAGTFEYRARTADA 568 Query: 426 REDMSLEEVINYA 438 E + + + Sbjct: 569 AESLDKAGLFSRL 581 >gi|330839271|ref|YP_004413851.1| Prolyl-tRNA synthetase [Selenomonas sputigena ATCC 35185] gi|329747035|gb|AEC00392.1| Prolyl-tRNA synthetase [Selenomonas sputigena ATCC 35185] Length = 568 Score = 235 bits (600), Expect = 9e-60, Method: Composition-based stats. Identities = 117/276 (42%), Positives = 169/276 (61%), Gaps = 4/276 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK + P L+E P DAEI SH+LMLR GMI + + G+Y++LPL + + + IIREE Sbjct: 1 MLTSKLYAPTLREVPSDAEITSHRLMLRAGMIRKAAGGVYTYLPLAWRTIKKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P +Q A++W ESGR+ +G+EM RL D + + GPTHEE++T + R Sbjct: 61 MDAAGGQELCMPIMQPAEIWQESGRWSVFGQEMFRLKDCHGREFCLGPTHEEMITTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ K+RDE+RPRFG+MRSREF+MKD YSFD G+ SY KM+ + Sbjct: 121 EVRSYKQLPLLLYQIQNKYRDEIRPRFGLMRSREFIMKDLYSFDKDEAGADISYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y +F R GLK P+ A++G IGG+ +HEF VLA GE+++ C D+ E + Sbjct: 181 YTNVFTRCGLKFRPVEADAGAIGGNHTHEFTVLAAAGESEIACCTAC-DYAANVEKAELL 239 Query: 240 --DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D +++ P T ++ + L L Sbjct: 240 PIDASEEEAQPLKKVETPACKTIELVADFLRVPLER 275 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 64/188 (34%), Positives = 99/188 (52%), Gaps = 2/188 (1%) Query: 259 TSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 T+D+ D P RGIE G +F GTKYS + ATF +GK+ + MG Sbjct: 380 TADIRLMAAGDPCPHCGAPVEITRGIEAGQVFKLGTKYSEALGATFLDENGKEKALFMGC 439 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R +AA IE +D GIIWP ++AP+++ ++ + A E++Y L G Sbjct: 440 YGIGVGRTMAAAIEQHNDEHGIIWPRAIAPYEVVVVPVNAKASEQLALAEEVYEMLLAAG 499 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D DD ++ G +F ADL+G+PL++ +G K + + K+E+K R +G D + E + Sbjct: 500 VDAILDDRKDRAGVKFKDADLIGYPLRITIGPKALEEGKIELKVRRSGESCDCTKAECLA 559 Query: 437 YASHRFSN 444 + Sbjct: 560 KVQELLKD 567 >gi|241204765|ref|YP_002975861.1| threonyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858655|gb|ACS56322.1| threonyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 661 Score = 235 bits (600), Expect = 9e-60, Method: Composition-based stats. Identities = 70/441 (15%), Positives = 142/441 (32%), Gaps = 41/441 (9%) Query: 7 FLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L + RD ++ L + G+ W G + + A +R Sbjct: 234 YLHMLAEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHGKGWRVFQTLVAYMRRRL-AGD 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIFRS 120 E++ P + LW SG + Y M ++ +D+ P + IF+ Sbjct: 291 YQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHIQIFKH 350 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR LP + R E G+MR R F DA+ F + + Sbjct: 351 GLKSYRELPIRLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKIN-D 409 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L ++ G + ++ + P S + A++ V E Sbjct: 410 LILSVYKDFGFDEVTIKLSTRPDKRVGSDDLWDRAESVMMGVL------------ETIQQ 457 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 I+ A Y + L D++ + ++ FG Sbjct: 458 QSNNIKTGILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG-------- 506 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + ++ + + G+M ++ + G +W + ++ Sbjct: 507 AFYIDSNSEKTQPVMIHRAICGSMERFLGILIENFAGHMPLWVSPLQVVVATIT------ 560 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 ++ L + G +V D E+I + + P+ ++ G K + V I Sbjct: 561 SEADAYGLEVAEALREAGLNVETDFRNEKINYKVREHSVTKVPVIIVCGRKEAEERTVNI 620 Query: 419 KHRLTGIREDMSLEEVINYAS 439 + + + M L+ + + Sbjct: 621 RRLGSQDQVSMGLDAAVESLA 641 >gi|160883804|ref|ZP_02064807.1| hypothetical protein BACOVA_01776 [Bacteroides ovatus ATCC 8483] gi|237722137|ref|ZP_04552618.1| threonyl-tRNA synthetase [Bacteroides sp. 2_2_4] gi|299149166|ref|ZP_07042227.1| threonine--tRNA ligase [Bacteroides sp. 3_1_23] gi|156110889|gb|EDO12634.1| hypothetical protein BACOVA_01776 [Bacteroides ovatus ATCC 8483] gi|229447947|gb|EEO53738.1| threonyl-tRNA synthetase [Bacteroides sp. 2_2_4] gi|298512833|gb|EFI36721.1| threonine--tRNA ligase [Bacteroides sp. 3_1_23] Length = 646 Score = 235 bits (600), Expect = 9e-60, Method: Composition-based stats. Identities = 76/445 (17%), Positives = 148/445 (33%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L KG+ WLP G + +R Q R Sbjct: 230 EYLVLLEEAKKRDHRKIGKEMQLFM-FSETVGKGLPMWLPKGTALRLRLQEFLRRIQTRY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + L+V SG Y YGK+ + + P + +I+++ Sbjct: 289 DYQEVITPPIGNKLLYVTSGHYAKYGKDAFQPIHTPEEGEEYFLKPMNCPHHCEIYKNFP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F + + ++ Sbjct: 349 RSYKDLPLRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPEQVKDE-FLRVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + ++ + D + + D + Sbjct: 408 SIVFRSMDFQNFEAQISLR--------------DKVNREKYIGSDDNWEKAEQAIIEACA 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + +E A Y D + D++ ++ ++ Sbjct: 454 EKGLPAKIEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFEL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G+D + H + G+M AV+ GK +W + I + Sbjct: 503 EYMGSDNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LTPEQVVILPISE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + E++ L DD E+IG + ++ P +IVG K + +V ++ Sbjct: 557 KFNEYAEQVKMYLKIHEIRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVSVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M EE + N Sbjct: 617 RQGEGDKGTMKFEEFAKILNEEVQN 641 >gi|77748729|ref|NP_643874.2| prolyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306] gi|114152277|sp|Q8PGP9|SYP_XANAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 564 Score = 235 bits (600), Expect = 9e-60, Method: Composition-based stats. Identities = 115/223 (51%), Positives = 152/223 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 1 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 61 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYSPTAEEAAAEFARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT E Y+ M + Sbjct: 121 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDEDMAREYDNMRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC 223 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE + Sbjct: 181 YTRIFTRLGLDFRAVQADSGAIGGDASQEFHVIADSGEDSLAF 223 Score = 107 bits (267), Expect = 4e-21, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 1/193 (0%) Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 + P + + + + ARGIEVGH+F G++Y+ + AT Sbjct: 370 NWGRDLPEPETVADVRNVVEGERAADGGELRLARGIEVGHVFQLGSQYAQALQATVIDEG 429 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDAC 365 GK ++MG YGIG R+VAA IE +HD GIIWP +AP+++ + I D A Sbjct: 430 GKAAVMKMGCYGIGISRIVAAAIEQNHDDAGIIWPAPMAPWQVVVCVINPKQDPQVLAAA 489 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 + + +L G D DD G + G+ FA +LLG P +V+V + ++ E + R Sbjct: 490 QALLDQLLAAGLDAALDDRGLRPGAMFADMELLGIPHRVVVSERGLAAGTFEYRARTADA 549 Query: 426 REDMSLEEVINYA 438 E + + + Sbjct: 550 AESLDKAGLFSRL 562 >gi|290968110|ref|ZP_06559655.1| proline--tRNA ligase [Megasphaera genomosp. type_1 str. 28L] gi|290781785|gb|EFD94368.1| proline--tRNA ligase [Megasphaera genomosp. type_1 str. 28L] Length = 575 Score = 235 bits (600), Expect = 9e-60, Method: Composition-based stats. Identities = 117/263 (44%), Positives = 171/263 (65%), Gaps = 2/263 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK + P L+++P +AE+ASHK ML+ GMI +++ G YS+LPL ++++ + IIREE Sbjct: 1 MLASKLYCPTLRDDPAEAEVASHKYMLKAGMIRKNASGFYSFLPLARRSVLKIEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++TGA E+ +P +Q A++W ESGR+D YGKEM +LADR+ PTHEE++T + R+ Sbjct: 61 MDKTGAQEIMMPIVQPAEIWQESGRWDVYGKEMFKLADRHGNEYCLAPTHEELITTLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ K+RDE+RPRFG+MRSREF+M+D+YSFD EG + SY M+ + Sbjct: 121 ELRSYKQLPVNLYQIQNKYRDEIRPRFGLMRSREFVMQDSYSFDTDQEGLEKSYQAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--D 238 Y RIF R GL+ + A+SG IGG SHEF+ LA +GE + + T Sbjct: 181 YSRIFTRCGLQYRTVLADSGQIGGKHSHEFMALAASGEADIVTCTQCAYAADVEQATPNP 240 Query: 239 FDDIISLNSIVEQWTAPYAATSD 261 +E++ P+ AT + Sbjct: 241 LPAAAEPLQAIEKFATPHCATIE 263 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 67/180 (37%), Positives = 98/180 (54%), Gaps = 2/180 (1%) Query: 269 DSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D PE RGIEVG +F GTKYS + A+F DGK MG YGIG R +A Sbjct: 392 DGCPECGAPVQLTRGIEVGQVFQLGTKYSEALQASFLDKDGKAKPFVMGCYGIGVTRTMA 451 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A IE HD +GI+WP ++AP++ ++ + D+V A ++Y +LS ++ DD E Sbjct: 452 AAIEQYHDERGILWPVAIAPYEAVILPLNMKDEVMVTAARELYTQLSADSSEIVLDDRPE 511 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 + G +F ADL+G+P+Q++VG + VEIK R TG +E + + + R Sbjct: 512 RAGVKFNDADLIGYPVQIVVGKDTKTKGTVEIKVRRTGAKEAVPVRTAVGRVQAILRELR 571 >gi|260170790|ref|ZP_05757202.1| threonyl-tRNA synthetase [Bacteroides sp. D2] gi|315919124|ref|ZP_07915364.1| threonyl-tRNA synthetase [Bacteroides sp. D2] gi|313692999|gb|EFS29834.1| threonyl-tRNA synthetase [Bacteroides sp. D2] Length = 646 Score = 235 bits (600), Expect = 9e-60, Method: Composition-based stats. Identities = 76/445 (17%), Positives = 148/445 (33%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L KG+ WLP G + +R Q R Sbjct: 230 EYLVLLEEAKKRDHRKIGKEMQLFM-FSETVGKGLPMWLPKGTALRLRLQEFLRRIQTRY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + L+V SG Y YGK+ + + P + +I+++ Sbjct: 289 DYQEVITPPIGNKLLYVTSGHYAKYGKDAFQPIHTPEEGEEYFLKPMNCPHHCEIYKNFP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F + + ++ Sbjct: 349 RSYKDLPLRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPEQVKDE-FLRVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + ++ + D + + D + Sbjct: 408 SIVFRSMDFQNFEAQISLR--------------DKVNREKYIGSDDNWEKAEQAIIEACA 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + +E A Y D + D++ ++ ++ Sbjct: 454 EKGLPAKIEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFEL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G+D + H + G+M AV+ GK +W + I + Sbjct: 503 EYMGSDNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LTPEQVVILPISE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + E++ L DD E+IG + ++ P +IVG K + +V ++ Sbjct: 557 KFNEYAEQVKMYLKIHEIRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVSVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M EE + N Sbjct: 617 RQGEGDKGTMKFEEFAKILNEEVQN 641 >gi|326201675|ref|ZP_08191546.1| threonyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] gi|325988275|gb|EGD49100.1| threonyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] Length = 645 Score = 235 bits (600), Expect = 1e-59, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 160/444 (36%), Gaps = 33/444 (7%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L T + + +G+ +P G + + + + +E+ R Sbjct: 230 EYVTKLEEAKKRDHNKLGRELELFTT-VEEIGQGLPLLMPKGARIVQTLQRFVEDEEERR 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA--MIYGPTHEEVMTDIFRSHI 122 G + P + +DL+ SG + Y M L D M P I+ + + Sbjct: 289 GYVLTKTPFMAKSDLYKLSGHWQHYKDGMFLLGDEEKDEEVMALRPMTCPFQFMIYNTKL 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+LP + + FR+E G++R R+F + + + TPE + + + Sbjct: 349 HSYRDLPIRYGETSTLFRNEASGEMHGLIRVRQFTISEGH-LVCTPEQLEDEFKGVVDLI 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + LG I D+++ F + + +++ + T D Sbjct: 408 KFMMETLG------------IEEDVTYRFSKWDPKNKEKYIGNEEDWENVQGQMRTILDH 455 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ + + + + ++ F + S+ Sbjct: 456 LKLDYKEAEGEAAFYGPKLDIQCKNVH---GKEDTIITVQVD----FALAERLSMVY--- 505 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + K H + IG A++ + +P + P + ++ + Sbjct: 506 VDKNNEKKHPYIIHRTSIGCYERTLAMLI---EKYAGAFPTWLCPVQAKILPLVDKHH-- 560 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D +K+ L G V D E+IG + A + P +++G K + + V ++ R Sbjct: 561 -DFAQKVAQMLRDKGVKVEVDTRNEKIGYKIREAQMEKIPYMLVIGDKEMESNAVSVRSR 619 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 G MS E+ ++ Sbjct: 620 KEGDLGAMSAEQFVDKIVEEIRTR 643 >gi|257462679|ref|ZP_05627088.1| prolyl-tRNA synthetase [Fusobacterium sp. D12] Length = 593 Score = 235 bits (600), Expect = 1e-59, Method: Composition-based stats. Identities = 117/231 (50%), Positives = 158/231 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEI SH+L+LR GMI + + G+Y++LPLG + L V IIREE Sbjct: 25 MRFSKAYIKTLKETPKEAEIISHQLLLRAGMIKKLASGLYTYLPLGFRTLKKVENIIREE 84 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ +P LQ A+LW ESGR++ G+EM+RL DR+ + + GPT+EEV+TDI R+ Sbjct: 85 MDRAGSQELLMPVLQPAELWRESGRWNVMGEEMVRLKDRHQRDFVLGPTNEEVITDIVRN 144 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ K RDE RPRFG+MRSREF+MKDAYSF + E + M + Sbjct: 145 DISSYKSLPINLYHIQTKVRDERRPRFGLMRSREFIMKDAYSFHTSQESLDEEFENMKNT 204 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S Sbjct: 205 YTRIFERCGLKFRPVEADSGAIGGSGSQEFHVLAESGEDEIIYSDGCSYAA 255 Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats. Identities = 70/183 (38%), Positives = 101/183 (55%), Gaps = 3/183 (1%) Query: 261 DVHNEKLFDSLPE--NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ K + P+ K SARGIE GHIF G KYS + A++ G+ + MG YG Sbjct: 408 DIRLVKAGEDCPKSNGKLHSARGIECGHIFKLGDKYSKALGASYLDEKGESKIMLMGCYG 467 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R +AA IE ++D GIIWP ++AP+ + +I + E+IY L+K D Sbjct: 468 IGVGRTMAAAIEQNYDENGIIWPTALAPYLVDVIPANIKNTEQMKLAEEIYENLNKEHLD 527 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 DD E+ G +F ADL+GFP ++I G K +++ VE+K R TG ++S +EVI Sbjct: 528 AMIDDRDERPGFKFKDADLIGFPFKIICGKK-AAENIVELKIRKTGETLEVSADEVIPTI 586 Query: 439 SHR 441 Sbjct: 587 KEL 589 >gi|262065930|ref|ZP_06025542.1| proline--tRNA ligase [Fusobacterium periodonticum ATCC 33693] gi|291380410|gb|EFE87928.1| proline--tRNA ligase [Fusobacterium periodonticum ATCC 33693] Length = 567 Score = 235 bits (600), Expect = 1e-59, Method: Composition-based stats. Identities = 125/276 (45%), Positives = 167/276 (60%), Gaps = 4/276 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEIASHKLMLR MI + + GIY++LPLG + + + I+REE Sbjct: 1 MRFSKAYIKTLKETPKEAEIASHKLMLRAAMIKKLASGIYAYLPLGYRTIRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR+D G EMLRL DR+++ + PT EE++T I RS Sbjct: 61 MDRAGALELLMPVVQPAELWQESGRWDVMGAEMLRLQDRHERDFVLSPTQEEMITSIVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ KFRDE RPRFG+MR REF MKD YSF + E + M + Sbjct: 121 DISSYKSLPLNLYHIQTKFRDERRPRFGLMRGREFTMKDGYSFHTSQESLDEEFLNMRDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S D+ E + Sbjct: 181 YTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYSD-GSDYAANIEKAVSE 239 Query: 241 DIISLN---SIVEQWTAPYAATSDVHNEKLFDSLPE 273 I VE P T + + L L Sbjct: 240 LINPPKEDLREVELVHTPDCPTIESLAKYLDIPLER 275 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 72/184 (39%), Positives = 101/184 (54%), Gaps = 2/184 (1%) Query: 261 DVHNEKLFDSLP-ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 D+ ++ D+ K SARGIE G IF G KYS M+AT+ +GK Y+ MG YGI Sbjct: 383 DIRKVRVGDNCITGGKLHSARGIECGQIFKLGDKYSKAMNATYLDENGKTQYMLMGCYGI 442 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G R +AA IE ++D GIIWP S+AP+ + +I ++ EKIY L DV Sbjct: 443 GVTRTMAAAIEQNNDENGIIWPVSIAPYIVDVIPANIKNEGQVSLAEKIYNELQAENIDV 502 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 DD E+ G +F ADL+GFP +V+VG + + VE+K R TG +++ EV+ Sbjct: 503 MLDDRDEKPGFKFKDADLIGFPFKVVVGKR-ADEGIVEVKIRRTGETLELAQAEVVAKIK 561 Query: 440 HRFS 443 Sbjct: 562 ELMK 565 >gi|126740677|ref|ZP_01756363.1| threonyl-tRNA synthetase [Roseobacter sp. SK209-2-6] gi|126718192|gb|EBA14908.1| threonyl-tRNA synthetase [Roseobacter sp. SK209-2-6] Length = 649 Score = 235 bits (600), Expect = 1e-59, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 146/445 (32%), Gaps = 45/445 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD ++ L + + + G W P G K + +R Q R Sbjct: 234 KAHLHMLEEAAKRDHRKLGREMNLY--HMQEEAPGQVFWHPNGWKIYTTLQDYMRRMQER 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIY-----GPTHEEVMTDIF 118 G +E++ P + LW SG +D Y + M + D A P + +F Sbjct: 292 DGYVEVNTPQVVDRKLWEASGHWDKYQENMFIVEVDEDHAREKAINALKPMNCPCHVQVF 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F D + F + + + K Sbjct: 352 NQGLKSYRDLPLRMAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFC-SEDQIESETAKF 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +++ LG + ++ + P S E D + Sbjct: 411 IAFLSKVYADLGFHNWTIKLSTRPEKRIGSDE-----------------SWDLVEKALGD 453 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 ++E A Y + L D++ N + ++ Sbjct: 454 ACKAAGYEYEVLEGEGAFYGPKLEF---TLTDAIGRNWQCGTLQVDPNLP--------ER 502 Query: 298 MSATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + A F G DG H + +G+ ++ H GK W S+ Sbjct: 503 LEANFIGQDGNKHRPFMLHRACLGSFERFIGILIEEHAGKLPFWLAPRQVVVASIT---- 558 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++ L G D E+I + + P+ + VG + V + V Sbjct: 559 --SDADDYVNEVVETLRAAGVRAEADIRNEKINYKVREHSVGKVPVILAVGHREVEERTV 616 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + L+E + + Sbjct: 617 SVRRLGEKQTKVEGLDETVAKLTQE 641 >gi|114152274|sp|Q3SH24|SYP_THIDA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 576 Score = 235 bits (600), Expect = 1e-59, Method: Composition-based stats. Identities = 122/233 (52%), Positives = 165/233 (70%), Gaps = 1/233 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +++FL +E P +AE+ SHKLMLR G+I + G+Y+W+PLG + L V A++REE Sbjct: 1 MRTTQFFLSTTKEAPSEAELVSHKLMLRAGLIKRLGSGLYTWMPLGLRVLRRVEAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW E+GR+ +G +ML++ DR+++ +GPTHEEV+TD+ R Sbjct: 61 MNRAGAIELLMPAVQPAELWQETGRWAQFGPQMLKIKDRHEREFCFGPTHEEVITDLARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF + E +Y M+ + Sbjct: 121 EIKSYRQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHASRESLAATYQAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y RIF RLGL+ + A++G IGG SHEF VLAD+GE + D D+ Sbjct: 181 YGRIFTRLGLRFRAVAADTGAIGGSASHEFHVLADSGEDLIAYCPD-SDYAAN 232 Score = 151 bits (381), Expect = 3e-34, Method: Composition-based stats. Identities = 69/188 (36%), Positives = 104/188 (55%), Gaps = 8/188 (4%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGH+F G KYS M+AT+ GK ++MG Sbjct: 383 VADIRNVVAGDPSPDGKGTLALCRGIEVGHVFQLGNKYSQAMNATYLDEAGKAQAMEMGC 442 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+VAA +E +HDGKGI+WP S+APF + ++ I ++A + +YA L V Sbjct: 443 YGIGVSRIVAAAVEQNHDGKGIVWPASMAPFSVVIVAIGYGKSASVKNAADTLYADLMAV 502 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL-----TGIREDMS 430 G +V DD E+ G FA A+L+G P +V +G + +++ VE + R ++ Sbjct: 503 GVEVLLDDRDERPGVMFADAELVGIPHRVTLGERGLNEGVVEYQPRRAAPEQGADARKIA 562 Query: 431 LEEVINYA 438 + E + Sbjct: 563 VAEAKAFL 570 >gi|74318130|ref|YP_315870.1| prolyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259] gi|74057625|gb|AAZ98065.1| prolyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259] Length = 579 Score = 235 bits (600), Expect = 1e-59, Method: Composition-based stats. Identities = 122/233 (52%), Positives = 165/233 (70%), Gaps = 1/233 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +++FL +E P +AE+ SHKLMLR G+I + G+Y+W+PLG + L V A++REE Sbjct: 4 MRTTQFFLSTTKEAPSEAELVSHKLMLRAGLIKRLGSGLYTWMPLGLRVLRRVEAVVREE 63 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW E+GR+ +G +ML++ DR+++ +GPTHEEV+TD+ R Sbjct: 64 MNRAGAIELLMPAVQPAELWQETGRWAQFGPQMLKIKDRHEREFCFGPTHEEVITDLARR 123 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF + E +Y M+ + Sbjct: 124 EIKSYRQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHASRESLAATYQAMYDA 183 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y RIF RLGL+ + A++G IGG SHEF VLAD+GE + D D+ Sbjct: 184 YGRIFTRLGLRFRAVAADTGAIGGSASHEFHVLADSGEDLIAYCPD-SDYAAN 235 Score = 151 bits (381), Expect = 3e-34, Method: Composition-based stats. Identities = 69/188 (36%), Positives = 104/188 (55%), Gaps = 8/188 (4%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K RGIEVGH+F G KYS M+AT+ GK ++MG Sbjct: 386 VADIRNVVAGDPSPDGKGTLALCRGIEVGHVFQLGNKYSQAMNATYLDEAGKAQAMEMGC 445 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+VAA +E +HDGKGI+WP S+APF + ++ I ++A + +YA L V Sbjct: 446 YGIGVSRIVAAAVEQNHDGKGIVWPASMAPFSVVIVAIGYGKSASVKNAADTLYADLMAV 505 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL-----TGIREDMS 430 G +V DD E+ G FA A+L+G P +V +G + +++ VE + R ++ Sbjct: 506 GVEVLLDDRDERPGVMFADAELVGIPHRVTLGERGLNEGVVEYQPRRAAPEQGADARKIA 565 Query: 431 LEEVINYA 438 + E + Sbjct: 566 VAEAKAFL 573 >gi|165932872|ref|YP_001649661.1| threonyl-tRNA synthetase [Rickettsia rickettsii str. Iowa] gi|165907959|gb|ABY72255.1| threonyl-tRNA synthetase [Rickettsia rickettsii str. Iowa] Length = 644 Score = 235 bits (600), Expect = 1e-59, Method: Composition-based stats. Identities = 73/438 (16%), Positives = 154/438 (35%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + RD +L L + ++G+ W G + + IR++ + G Sbjct: 240 YLLMLEEAEKRDHRKLGRELDLF--HFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNG 297 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L LW SG ++ + +M + +DK + P + IF+ IKSY Sbjct: 298 YTEVKTPVLVDKSLWEASGHWEKFRDDMF-ALETDDKTLALKPMNCPCHVQIFKQGIKSY 356 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + L R+E G+MR R + DA+ F + + + + + Sbjct: 357 RDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAAEQITDETVSF-CKLLTEV 415 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P S+E D + + Sbjct: 416 YKDFGFTDIKVKFSDRPEIRAGSNE-----------------VWDKAENALKEAVEQAGF 458 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ A Y + L D++ + ++ F + + A++ Sbjct: 459 TYTLNPGEGAFYGPKLEF---VLTDAIGRQWQCGTLQMD----FVLPER----LDASYVA 507 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 A G+ + +G++ ++ + G+ +W + I D Sbjct: 508 ASGEKKRPVMLHRAILGSLERFIGILIEEYAGRFPLW------LAPVQVAIATITSDLND 561 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L G ++ ++I + P+ ++G + + +V I+ T Sbjct: 562 YALEVQKALIDNGVRTDFNISPDKINYKIREFSNQKIPMIAVIGKQEQENKQVAIRRLGT 621 Query: 424 GIREDMSLEEVINYASHR 441 +E +S+E++I Sbjct: 622 TDQEVLSVEQLIAVVKEE 639 >gi|330836194|ref|YP_004410835.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Spirochaeta coccoides DSM 17374] gi|329748097|gb|AEC01453.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Spirochaeta coccoides DSM 17374] Length = 588 Score = 235 bits (600), Expect = 1e-59, Method: Composition-based stats. Identities = 79/448 (17%), Positives = 143/448 (31%), Gaps = 41/448 (9%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L L++ RD + L + + G+ W P G + + R+E + Sbjct: 178 RLYLQHLEDVEKRDNRRLGKEQDLFSLH-EEAGPGLVYWHPRGARVRVAIENFWRDEHYK 236 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + LW SG Y M + + P + I+ + + Sbjct: 237 NGYEMVFSPHVGRSWLWETSGHLGFYKDSMYPAMEMDKSDYYVKPMNCPFHIMIYNNSKR 296 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP ++ +R E G+MR R F DA+ F TPE K+ L Sbjct: 297 SYRDLPIRMAELGTVYRYEKAGALHGLMRVRGFTQDDAHLFC-TPEQMDDEIRKVLEFSL 355 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + G + + + P E D + + Sbjct: 356 YMLRSFGFQDVKAYLSTRPEESVGERE-----------------RWDAATKALRNAIEKE 398 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + E A Y D+ K+ D++ ++S + S TF Sbjct: 399 GLAYEVDEGGGAFYGPKIDL---KVKDAIGREWQLSTVQFDFN--------MSDRFQMTF 447 Query: 303 KGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 DG++ M + R +IE+ + Sbjct: 448 VDKDGQEKRPYMIHRALLGSIERFFGVLIENYAGAFPPWLAPEQIMVVPVG-------EA 500 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + RL K G D +++ ++ A L P Q++VG + S+ KV +++ Sbjct: 501 FFPYATALRDRLRKEGLRADADLSDDRMNAKIRNAQLHKIPYQLVVGEREQSEDKVSVRY 560 Query: 421 RLTGIREDMSLEEVINYASHRFSNNRPV 448 R D+ + I + V Sbjct: 561 RNGNKANDVPTADFIAEVKAAVAAREQV 588 >gi|326533164|dbj|BAJ93554.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 711 Score = 235 bits (600), Expect = 1e-59, Method: Composition-based stats. Identities = 81/446 (18%), Positives = 150/446 (33%), Gaps = 38/446 (8%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R +Y I + RD + L H S G +LP G + + +R+E Sbjct: 303 RLKEYLHMIEEAKKRDHRLLGQSQELF--FFHPLSPGSCFFLPNGAIIYNKLMDFLRKEY 360 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G E+ P + + LW SG +Y M + + + P + +F Sbjct: 361 RERGYREVLSPNIYNMQLWETSGHAANYKDNMF-VFEIEKQEFGLKPMNCPGHCLMFGHK 419 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP + R+EL G+ R R F DA+ F T K Sbjct: 420 VRSYRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFC-TESQIKDEVGACLEF 478 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++ G + + + P E + + Sbjct: 479 IDYVYKIFGFQY-ELELSTRPEKYLGDIE-----------------TWNKAEQQLTEALN 520 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I E A Y D+ +FD+L + + ++ F ++ L SA Sbjct: 521 EFGKPWKINEADGAFYGPKIDIG---VFDALKRKFQCATLQLD----FQLPLRFKLTYSA 573 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + V + +G++ + A++ ++GK +W + Sbjct: 574 E--DEAKLERPVMIHRAILGSVERMFAILLEHYNGKWPLWLSPRQAIVCCV------SSN 625 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ++++A++ G V D I + A L F ++VG+K KV ++ Sbjct: 626 SLAYAKEVHAQIHAAGFHVDIDMTDRTIQKKVREAQLAQFNYILVVGAKEAESGKVVLRV 685 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R S+ +VI S ++ + Sbjct: 686 RDKADLSTESIADVIARFSDEVASFK 711 >gi|317121664|ref|YP_004101667.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885] gi|315591644|gb|ADU50940.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885] Length = 644 Score = 235 bits (600), Expect = 1e-59, Method: Composition-based stats. Identities = 78/436 (17%), Positives = 148/436 (33%), Gaps = 41/436 (9%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L + + G W P G + RE Q R G E+ P Sbjct: 244 AKRRDHRKLGPELDLF--HFEEIAPGYAFWHPKGATVYGLLERFSRELQARYGYQEVRTP 301 Query: 73 TLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + DLW SG ++ Y + M L +R P + I+RS I+SYR+LP Sbjct: 302 EILKVDLWHRSGHWEHYRENMF-LIEREGAQFGVKPMNCPGHCLIYRSRIRSYRDLPLRL 360 Query: 133 YQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 + R E G++R R F DA+ + + + ++ I+ ++ Sbjct: 361 AEYGRLARFERSGTLHGLLRVRGFEQDDAH-LFVREDQIEEEIGRVLELVDAIYGTFDMR 419 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ 251 A T + + + + S+ Sbjct: 420 YEIKLA------------------TRPDKFMGEPALWERAEAALARALEAAGRQYSLAPG 461 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A Y D + + DSL + + ++ F ++ T+ A G++ Sbjct: 462 DGAFYGPKLDFY---VIDSLGRKWQTATVQLD----FQMPIRFD----LTYVDASGQEQR 510 Query: 312 V-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + +G++ ++ + +P +AP ++ ++ + D ++ Sbjct: 511 PVMIHRAIMGSLERFIGILI---EHYAGAFPVWLAPVQVRVLPVSDRHH---DYARRVEE 564 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 RL G V D E++G + A + P ++VG + + V ++ R G Sbjct: 565 RLRAEGLRVEVDARDEKLGYKIRQAQVEKVPYMLVVGDREAQEGTVAVRSRDRGDLGSQP 624 Query: 431 LEEVINYASHRFSNNR 446 LE + + R Sbjct: 625 LEAFARQVAAAVAERR 640 >gi|310821380|ref|YP_003953738.1| threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] gi|309394452|gb|ADO71911.1| Threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] Length = 642 Score = 235 bits (600), Expect = 1e-59, Method: Composition-based stats. Identities = 74/441 (16%), Positives = 131/441 (29%), Gaps = 42/441 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L H + G W P G ++ +R T Sbjct: 236 EYLTRIEESKKRDHRKLGKELDLF--HFHPFAPGSAFWSPKGTTLYQTLSQWMRRLTAET 293 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRN--DKAMIYGPTHEEVMTDIFRSHI 122 G +E+ P + + LW SG + Y + M + D + P + F Sbjct: 294 GYVEIKTPLMFNKGLWEASGHWGKYKENMFLVLDNESGEHDFSLKPMNCPSHHLYFGFKR 353 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+LP + + R+E G+ R R+F DA+ + + + FV Sbjct: 354 HSYRDLPLRLHTQDVLHRNEAAGSLGGLTRVRQFAQDDAHIYCTEDQIGDE--VRRFVKL 411 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L + + + P D + Sbjct: 412 LDHVYNAVGLKYSAKFSTRPEQR-----------------LGEDALWDRAESALEGVLKT 454 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + A Y D + DS+ R ++G I + Sbjct: 455 LGVPYEVKPGEGAFYGPKIDFD---VSDSIG-------RKWQLGTI-QLDYLAAQRFDLK 503 Query: 302 FKGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G D +H + G+ A++ G W + Sbjct: 504 YIGEDNAEHRPVVLHRAIYGSFERFIAILIEHFAGAFPAW------LAPIQAVLVTVADR 557 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D K+ +L G V DD G+ + ++ + P +++G V V + Sbjct: 558 QLDYARKVRDQLRAKGFRVELDDRGQSLNAKIREWQIQKLPFTLVIGDNEVEAGGVAPRR 617 Query: 421 RLTGIREDMSLEEVINYASHR 441 + M LE+ S Sbjct: 618 YGGEDLKSMKLEDFEALLSKE 638 >gi|298346881|ref|YP_003719568.1| threonyl-tRNA synthetase [Mobiluncus curtisii ATCC 43063] gi|298236942|gb|ADI68074.1| threonyl-tRNA synthetase [Mobiluncus curtisii ATCC 43063] Length = 669 Score = 235 bits (600), Expect = 1e-59, Method: Composition-based stats. Identities = 64/457 (14%), Positives = 135/457 (29%), Gaps = 47/457 (10%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y + + RD ++L L + + G+ + P G + R Sbjct: 245 LKEYVTRMEEAAKRDHRRLGNELDLFS-FPEEIGSGLAVFHPKGAMVRMEMENYSRRRHL 303 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTH 110 G + P + L+ SG + Y M + P + Sbjct: 304 EEGYSFVYTPHVTKGQLFETSGHLEWYKDGMFPPMRVDEECDDQGNVTKEGFDYYLKPMN 363 Query: 111 EEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEG 169 + I++S +SYR LP ++ +R E G+ R R F D++ + + Sbjct: 364 CPMHNLIYKSRSRSYRELPLRLFEFGTVYRYEKSGVVHGLTRGRGFTQDDSHIYCTREQM 423 Query: 170 SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMD 229 + L + GL + + + S + + Sbjct: 424 KDELTK-LLTFVLDLLKDYGLDDFYLELST----------------KNPHKFVGSDEIWE 466 Query: 230 FPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY 289 + + A Y + + D++ ++S ++ F Sbjct: 467 EATNTLAEVATASGLELVPDPEGAAFYGPKI---SVQARDAIGRTWQMSTIQLD----FN 519 Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 ++ L +A + V + G++ V+ + G W Sbjct: 520 LPERFDLEYTAA---DGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAW------LAP 570 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 + + + D CE I RL V D ++ G + A P +I G + Sbjct: 571 VQVRLVPVAEAFNDYCEDIANRLRAENVRVEVDTTDDRFGKKIRNAAKDKIPFTLIAGGE 630 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 + V ++R + + +++ I + R Sbjct: 631 DAEANAVSFRYRGGEQKNGVPIDQAIAEILEVIRSRR 667 >gi|81429010|ref|YP_396010.1| threonyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K] gi|123742216|sp|Q38VT0|SYT_LACSS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|78610652|emb|CAI55703.1| Threonyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K] Length = 656 Score = 235 bits (600), Expect = 1e-59, Method: Composition-based stats. Identities = 75/440 (17%), Positives = 156/440 (35%), Gaps = 34/440 (7%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + RD + ++L L + + G+ WLP G ++ I +++ G Sbjct: 235 RRQEAKERDHRVIGNQLDLF--FVDPKVGAGLPYWLPNGATIRRSIERYIIDKEVANGYE 292 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYR 126 + P L + DL+ +SG +D Y ++M D D M P + +++ H +SYR Sbjct: 293 HVYTPILANLDLYKQSGHWDHYREDMFPPMDMGDGEMLELRPMNCPSHIQVYKHHPRSYR 352 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ + R E ++ + + + P+ + + + + ++ Sbjct: 353 ELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIQDEFKSILGLMIDVYA 412 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIISL 245 + R D T+ + D M + DD+ Sbjct: 413 DFNINDYTFRLS--------------YRDPANTEKYFDDDEMWNKAQAMLKGAMDDLGLD 458 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y DV + ++ + +S ++ F ++ L + G Sbjct: 459 YVEAEGEAAFYGPKLDVQTKT---AMGNEETLSTIQLD----FMLPERFDLH----YVGE 507 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DG+ H M G + + + +P +AP + +I + + + D Sbjct: 508 DGEMHRPVMIHR--GLVSTMERFTAYLTEIYKGAFPTWLAPTQAVIIPV--KNDLHYDYA 563 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 + I + K G V DD E++G + A P ++VG + ++ + V ++ Sbjct: 564 KNIKDEMIKRGLRVRIDDRNEKMGYKIREAQTSKIPYTLVVGDQELAQATVSVRKYGEEN 623 Query: 426 REDMSLEEVINYASHRFSNN 445 + + + IN N Sbjct: 624 AVEEASDMFINAIVAEVGNY 643 >gi|293372832|ref|ZP_06619210.1| threonine--tRNA ligase [Bacteroides ovatus SD CMC 3f] gi|298480838|ref|ZP_06999033.1| threonine--tRNA ligase [Bacteroides sp. D22] gi|292632207|gb|EFF50807.1| threonine--tRNA ligase [Bacteroides ovatus SD CMC 3f] gi|295085227|emb|CBK66750.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Bacteroides xylanisolvens XB1A] gi|298272861|gb|EFI14427.1| threonine--tRNA ligase [Bacteroides sp. D22] Length = 646 Score = 235 bits (600), Expect = 1e-59, Method: Composition-based stats. Identities = 76/445 (17%), Positives = 148/445 (33%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L KG+ WLP G + +R Q R Sbjct: 230 EYLVLLEEAKKRDHRKIGKEMQLFM-FSETVGKGLPMWLPKGTALRLRLQEFLRRIQTRY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + L+V SG Y YGK+ + + P + +I+++ Sbjct: 289 DYQEVITPPIGNKLLYVTSGHYAKYGKDAFQPIHTPEEGEEYFLKPMNCPHHCEIYKNFP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F + + ++ Sbjct: 349 RSYKDLPLRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPEQVKDE-FLRVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + ++ + D + + D + Sbjct: 408 SIVFRSMDFQNFEAQISLR--------------DKVNREKYIGSDDNWEKAEQAIIEACA 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + +E A Y D + D++ ++ ++ Sbjct: 454 EKGLPAKIEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFEL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G+D + H + G+M AV+ GK +W + I + Sbjct: 503 EYMGSDNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LTPEQVVILPISE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + E++ L DD E+IG + ++ P +IVG K + +V ++ Sbjct: 557 KFNEYAEQVKMYLKIHEIRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVSVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M EE + N Sbjct: 617 RQGEGDKGTMKFEEFAKILNEEVQN 641 >gi|229513024|ref|ZP_04402490.1| prolyl-tRNA synthetase [Vibrio cholerae TMA 21] gi|229349917|gb|EEO14871.1| prolyl-tRNA synthetase [Vibrio cholerae TMA 21] Length = 600 Score = 235 bits (600), Expect = 1e-59, Method: Composition-based stats. Identities = 115/237 (48%), Positives = 154/237 (64%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M V+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYEAMHVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL P+ A++G IGG+ SHEF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 67/189 (35%), Positives = 109/189 (57%), Gaps = 3/189 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N D + RGIEVGHIF GT YS M+ ++GK+ ++M Sbjct: 382 GKVEDLRNVVEGDPSPCGNGTLMLKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVAA IE +HD GIIWPD++APF+++++ + + + A EK+YA L+ Sbjct: 442 GCYGIGVSRVVAAAIEQNHDDYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G +V +DD E+ G F+ +L+G P +I+G + + + E K+R +G +E +++ Sbjct: 502 AAGIEVLFDDRKERPGVMFSDMELIGVPHTIIIGDRSMDEGHFEYKNRRSGEKEAVAMAS 561 Query: 434 VINYASHRF 442 +I++ + Sbjct: 562 IIDFIQAKL 570 >gi|301167107|emb|CBW26686.1| threonyl-tRNA synthetase [Bacteriovorax marinus SJ] Length = 584 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 74/444 (16%), Positives = 143/444 (32%), Gaps = 42/444 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K L L+E RD L L + + ++P G + + +RE Sbjct: 167 KQLKAHLNFLEEAKKRDHRKLGKDLELF--HFNSVAPASPFFMPKGAFVYNRLIEFMREI 224 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + E+ P + +DLW SG Y+ Y + M + +++ P + +F+ Sbjct: 225 YRKYDYQEVITPQILDSDLWHTSGHYEHYKENM-YFSRIDEREYAVKPMNCPCHMLMFKH 283 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 + SYR+LP + R E G+ R R F DA+ F K+ Sbjct: 284 YKYSYRDLPMRYADFGRLHRYEKAGAVTGLTRVRTFCQDDAHIFIDMDGIQDE-ITKLME 342 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + + G I + + P D + Sbjct: 343 MFFICYEHFGFTGIKVNLSTRPEKKS-----------------GDDATWDKAENALEEAL 385 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 I E A Y DV ++ D+L ++ ++ F ++ Sbjct: 386 KKSGHEYFIKEGDGAFYGPKIDV---EIADALGRYYQLGTIQLD----FQLPERF----G 434 Query: 300 ATFKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 ++ A G D + + R +E A + Sbjct: 435 LSYTNAQGNDERPVVIHRALLGSLERFFGVYLEHVAGVFPFWLAPEQAVIVPV------N 488 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 ++ D K+ + L +G V DD E +G + P +++G + + ++ V Sbjct: 489 NEFHLDFANKLQSELFAMGLRVKVDDRNESMGYKTRQIQKSKAPFMIVIGDREMENNSVS 548 Query: 418 IKHRLTGIREDMSLEEVINYASHR 441 ++ E +++EE+ S Sbjct: 549 LRKHGEKKTESLTIEELKKLFSEL 572 >gi|315656661|ref|ZP_07909548.1| threonine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492616|gb|EFU82220.1| threonine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 669 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 64/457 (14%), Positives = 135/457 (29%), Gaps = 47/457 (10%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y + + RD ++L L + + G+ + P G + R Sbjct: 245 LKEYVTRMEEAAKRDHRRLGNELDLFS-FPEEIGSGLAVFHPKGAMVRMEMENYSRRRHL 303 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTH 110 G + P + L+ SG + Y M + P + Sbjct: 304 EEGYSFVYTPHVTKGQLFETSGHLEWYKDGMFPPMRVDEECDDQGNVTKEGFDYYLKPMN 363 Query: 111 EEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEG 169 + I++S +SYR LP ++ +R E G+ R R F D++ + + Sbjct: 364 CPMHNLIYKSRSRSYRELPLRLFEFGTVYRYEKSGVVHGLTRGRGFTQDDSHIYCTREQM 423 Query: 170 SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMD 229 + L + GL + + + S + + Sbjct: 424 KDELTK-LLTFVLDLLKDYGLDDFYLELST----------------KNPHKFVGSDEIWE 466 Query: 230 FPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY 289 + + A Y + + D++ ++S ++ F Sbjct: 467 EATNTLAEVATASGLELVPDPEGAAFYGPKI---SVQARDAIGRTWQMSTIQLD----FN 519 Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 ++ L +A + V + G++ V+ + G W Sbjct: 520 LPERFDLEYTAA---DGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAW------LAP 570 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 + + + D CE I RL V D ++ G + A P +I G + Sbjct: 571 VQVRLVPVAEAFNDYCEDIANRLRAENVRVEVDTTDDRFGKKIRNAAKDKIPFTLIAGGE 630 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 + V ++R + + +++ I + R Sbjct: 631 DAEANAVSFRYRGGEQKNGVPIDQAIAEILEVIRSRR 667 >gi|227485697|ref|ZP_03916013.1| threonine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] gi|227236252|gb|EEI86267.1| threonine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] Length = 640 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 74/442 (16%), Positives = 143/442 (32%), Gaps = 42/442 (9%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + + +E RD ++ L H+ G + P G ++ + R+ + +G Sbjct: 232 YEELQKEIARRDHRKIGKEMDLFA--FHEEGPGFPFFHPNGMILMNELLGWWRDVLDHSG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + DLW SG +D Y + M +D+ P + + S SY Sbjct: 290 YGEIKTPLILNEDLWHRSGHWDHYKENM-YFTKIDDEDYAIKPMNCPGSVLTYASRQHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R EL G+ R R F DA+ + L + + Y + Sbjct: 349 RDLPIRLAEFGQVHRHELSGTLHGLFRVRTFTQDDAHVYCLPSQIKEEVYKM-IDLADLL 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K + P DF ++ Sbjct: 408 YSTFGFKYTM-ELSTRP-----------------DDYMGDIKDWDFAEEQLKLALEERGI 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I A Y D H L D+ + ++ F + Sbjct: 450 DYQINPGDGAFYGPKIDFH---LLDAAKREWQCGTIQLD----FQLPA----NFELEYID 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G+ + +G++ V+ G+ +W + + D Sbjct: 499 ENGEKKRPVMLHRALLGSVERFIGVLTEHFAGRFPLW------INPRQVEVIPVADRFAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +I + K G V D+ E +G + A ++ ++VG K + + +++R Sbjct: 553 KAHEIAKEIEKAGFRVGVDERSEGVGYKIRSAQMMRTNYMLVVGDKEIESGLLTVRNRDG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 +D++L + I S + Sbjct: 613 EETKDVNLADFIAKISEERDSK 634 >gi|294783936|ref|ZP_06749258.1| proline--tRNA ligase [Fusobacterium sp. 1_1_41FAA] gi|294479748|gb|EFG27527.1| proline--tRNA ligase [Fusobacterium sp. 1_1_41FAA] Length = 567 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 124/276 (44%), Positives = 166/276 (60%), Gaps = 4/276 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEI SHKLMLR MI + + GIY++LPLG + + + IIREE Sbjct: 1 MRFSKAYIKTLKETPKEAEIVSHKLMLRAAMIKKLASGIYAYLPLGYRTIRKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR+D G EMLRL DR+++ + PT EE++T I RS Sbjct: 61 MDRAGALELLMPVVQPAELWQESGRWDVMGAEMLRLKDRHERDFVLSPTQEEMITSIVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ KFRDE RPRFG+MR REF MKD YSF + E + M + Sbjct: 121 DISSYKSLPLNLYHIQTKFRDERRPRFGLMRGREFTMKDGYSFHTSQESLDEEFLNMRDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S ++ E + Sbjct: 181 YTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYSD-GSEYAANIEKAVSE 239 Query: 241 DI---ISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 I VE P T + + L L Sbjct: 240 LINPPKEELREVELVHTPDCPTIESLAKYLDIPLER 275 Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 74/186 (39%), Positives = 103/186 (55%), Gaps = 2/186 (1%) Query: 259 TSDVHNEKLFDSLP-ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ ++ D+ K SARGIE G IF G KYS M+AT+ +GK Y+ MG Y Sbjct: 381 VADIRKVRVGDNCITGGKLHSARGIECGQIFKLGDKYSKAMNATYLDENGKTQYMLMGCY 440 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R +AA IE ++D GIIWP S+AP+ + +I ++ EKIY L Sbjct: 441 GIGVTRTMAAAIEQNNDENGIIWPVSIAPYIVDVIPANIKNEGQVSLAEKIYNELQAEDI 500 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 DV DD E+ G +F ADL+GFP +V+VG + V + VE+K R TG ++S EV+ Sbjct: 501 DVMLDDRDEKPGFKFKDADLIGFPFKVVVGKR-VDEGIVEVKIRRTGETLEVSESEVVAK 559 Query: 438 ASHRFS 443 Sbjct: 560 IKELMK 565 >gi|300767159|ref|ZP_07077071.1| threonine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494978|gb|EFK30134.1| threonine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 688 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 72/440 (16%), Positives = 156/440 (35%), Gaps = 34/440 (7%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + RD + ++L L + + G+ W+P G + I +++ G Sbjct: 274 RRQEARERDHRVIGNELDLF--FVDPKVGNGLPYWMPNGATIRRQIERYIIDKEVANGYQ 331 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHIKSYR 126 + P L + D++ +SG +D Y ++M D D + P + I+ HI+SYR Sbjct: 332 HVYTPVLANLDVYKQSGHWDHYREDMFPPMDMGDGEQLELRPMNCPSHIQIYNHHIRSYR 391 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ + R E + + + + + + + K+ + ++ Sbjct: 392 ELPLRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVALDQIEEEFKKILSLMVEVYE 451 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDIISL 245 + R D + + D + + DD+ Sbjct: 452 DFDISDYRFRLS--------------YRDPENKEKYFDDDAMWERSQKMLKSAMDDMGLD 497 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y DV + +L + +S ++ F ++ + GA Sbjct: 498 YFEAEGEAAFYGPKLDVQTKT---ALGGEETLSTIQLD----FLLPERFD----LKYVGA 546 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DG++H M G + + + + +P +AP ++++I + Sbjct: 547 DGEEHRPVMIHR--GLVSTMERFVAYLTEIYKGAFPTWLAPKQVTIIPVNNG--AHGAYA 602 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 E + RL+ G V DD E++G + + P ++VG + V++ V ++ Sbjct: 603 ETVRRRLAAEGVRVSIDDRNEKMGYKIRESQTKKVPYLLVVGDQEVANGSVSVRKYGEER 662 Query: 426 REDMSLEEVINYASHRFSNN 445 E +++ I + + Sbjct: 663 TESEAVDMFIGAITQEIKHY 682 >gi|5911945|emb|CAB55948.1| hypothetical protein [Homo sapiens] Length = 409 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 138/428 (32%), Positives = 220/428 (51%), Gaps = 35/428 (8%) Query: 21 ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW 80 S +LML+ G+I+ S G Y LP +A++ + +I +E G ++++P+L A+LW Sbjct: 3 KSQRLMLQVGLIYPASPGCYHLLPYTVRAMEKLVRVIDQEMQAIGGQKVNMPSLSPAELW 62 Query: 81 VESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMT-DIFRSHIKSYRNLPFTFYQIQLKF 139 + R+D GKE+LRL DR+ K GPTHEE +T I SY+ LPF YQ+ KF Sbjct: 63 QATNRWDLMGKELLRLRDRHGKEYCLGPTHEEAITALIASQKKLSYKQLPFLLYQVTRKF 122 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 RDE RPRFG++R REF MKD Y+FD +PE ++ +Y+ + +Y +F++LGL + ++A+ Sbjct: 123 RDEPRPRFGLLRGREFYMKDMYTFDSSPEAAQQTYSLVCDAYCSLFNKLGLPFVKVQADV 182 Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 G IGG +SHEF + D GE ++ + A Sbjct: 183 GTIGGTVSHEFQLPVDIGEDRLAICPRC--------------------------SFSANM 216 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 + ++ + +GIEVGH FY GTKYS +A F GK +MG YG+ Sbjct: 217 ETLDLSQMNCPACQGPLTKTKGIEVGHTFYLGTKYSSIFNAQFTNVCGKPTLAEMGCYGL 276 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA--HDQVCRDACEKIYARLSKV-- 375 G R++AA IE + WP +AP++ LI K +Q + ++Y +++ Sbjct: 277 GVTRILAAAIEVLSTEDCVRWPSLLAPYQACLIPPKKGSKEQAASELIGQLYDHITEAVP 336 Query: 376 --GCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSK-VEIKHRLTGIREDMSL 431 +V DD IG++ A+ G+P +I G + + D E+ + TG ++ Sbjct: 337 QLHGEVLLDDRTHLTIGNRLKDANKFGYPFVIIAGKRALEDPAHFEVWCQNTGEVAFLTK 396 Query: 432 EEVINYAS 439 + V++ + Sbjct: 397 DGVMDLLT 404 >gi|28378228|ref|NP_785120.1| threonine--tRNA ligase 1 [Lactobacillus plantarum WCFS1] gi|38258333|sp|Q88WU9|SYT_LACPL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|28271063|emb|CAD63968.1| threonine--tRNA ligase 1 [Lactobacillus plantarum WCFS1] Length = 654 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 72/440 (16%), Positives = 156/440 (35%), Gaps = 34/440 (7%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + RD + ++L L + + G+ W+P G + I +++ G Sbjct: 240 RRQEARERDHRVIGNELDLF--FVDPKVGNGLPYWMPNGATIRRQIERYIIDKEVANGYQ 297 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHIKSYR 126 + P L + D++ +SG +D Y ++M D D + P + I+ HI+SYR Sbjct: 298 HVYTPVLANLDVYKQSGHWDHYREDMFPPMDMGDGEQLELRPMNCPSHIQIYNHHIRSYR 357 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ + R E + + + + + + + K+ + ++ Sbjct: 358 ELPLRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVALDQIEEEFKKILSLMVEVYE 417 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDIISL 245 + R D + + D + + DD+ Sbjct: 418 DFDISDYRFRLS--------------YRDPENKEKYFDDDAMWERSQKMLKSAMDDMGLD 463 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y DV + +L + +S ++ F ++ + GA Sbjct: 464 YFEAEGEAAFYGPKLDVQTKT---ALGGEETLSTIQLD----FLLPERFD----LKYVGA 512 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DG++H M G + + + + +P +AP ++++I + Sbjct: 513 DGEEHRPVMIHR--GLVSTMERFVAYLTEIYKGAFPTWLAPKQVTIIPVNNG--AHGAYA 568 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 E + RL+ G V DD E++G + + P ++VG + V++ V ++ Sbjct: 569 ETVRRRLAAEGVRVSIDDRNEKMGYKIRESQTKKVPYLLVVGDQEVANGSVSVRKYGEER 628 Query: 426 REDMSLEEVINYASHRFSNN 445 E +++ I + + Sbjct: 629 TESEAVDMFIGAITQEIKHY 648 >gi|29345832|ref|NP_809335.1| threonyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482] gi|73919769|sp|Q8AAP2|SYT_BACTN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|29337725|gb|AAO75529.1| threonyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482] Length = 646 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 76/445 (17%), Positives = 149/445 (33%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L KG+ WLP G + +R Q R Sbjct: 230 EYLVLLEEAKKRDHRKIGKEMQLFM-FSETVGKGLPMWLPKGTALRLRLQEFLRRIQTRY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + L+V SG Y YGK+ + + P + +I+++ Sbjct: 289 DYQEVITPPIGNKLLYVTSGHYAKYGKDAFQPIHTPEEGEEYFLKPMNCPHHCEIYKNFP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F + + ++ Sbjct: 349 RSYKDLPLRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDE-FLRVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + ++ + D + + D + + Sbjct: 408 SIVFRSMNFQNFEAQISLR--------------DKVNREKYIGSDDNWEKAEQAIIEACE 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + +E A Y D + D++ ++ ++ Sbjct: 454 EKGLPAKIEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFEL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G+D + H + G+M AV+ GK +W + I + Sbjct: 503 EYMGSDNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LTPDQVAILPISE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + E++ L DD E+IG + ++ P +IVG K + +V ++ Sbjct: 557 KFNEYAEQVKMYLKMHEIRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVSVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M EE + N Sbjct: 617 RQGEGDKGTMKYEEFAKILNEEVQN 641 >gi|254556435|ref|YP_003062852.1| threonine-tRNA ligase 1 [Lactobacillus plantarum JDM1] gi|308180379|ref|YP_003924507.1| threonine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ST-III] gi|254045362|gb|ACT62155.1| threonine-tRNA ligase 1 [Lactobacillus plantarum JDM1] gi|308045870|gb|ADN98413.1| threonine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 654 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 72/440 (16%), Positives = 156/440 (35%), Gaps = 34/440 (7%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + RD + ++L L + + G+ W+P G + I +++ G Sbjct: 240 RRQEARERDHRVIGNELDLF--FVDPKVGNGLPYWMPNGATIRRQIERYIIDKEVANGYQ 297 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHIKSYR 126 + P L + D++ +SG +D Y ++M D D + P + I+ HI+SYR Sbjct: 298 HVYTPVLANLDVYKQSGHWDHYREDMFPPMDMGDGEQLELRPMNCPSHIQIYNHHIRSYR 357 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ + R E + + + + + + + K+ + ++ Sbjct: 358 ELPLRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVALDQIEEEFKKILSLMVEVYE 417 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDIISL 245 + R D + + D + + DD+ Sbjct: 418 DFDISDYRFRLS--------------YRDPENKEKYFDDDAMWERSQKMLKSAMDDMGLD 463 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y DV + +L + +S ++ F ++ + GA Sbjct: 464 YFEAEGEAAFYGPKLDVQTKT---ALGGEETLSTIQLD----FLLPERFD----LKYVGA 512 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DG++H M G + + + + +P +AP ++++I + Sbjct: 513 DGEEHRPVMIHR--GLVSTMERFVAYLTEIYKGAFPTWLAPKQVTIIPVNNG--AHGAYA 568 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 E + RL+ G V DD E++G + + P ++VG + V++ V ++ Sbjct: 569 ETVRRRLAAEGVRVSIDDRNEKMGYKIRESQTKKVPYLLVVGDQEVANGSVSVRKYGEER 628 Query: 426 REDMSLEEVINYASHRFSNN 445 E +++ I + + Sbjct: 629 TESEAVDMFIGAITQEIKHY 648 >gi|257453020|ref|ZP_05618319.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|257467420|ref|ZP_05631731.1| prolyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] Length = 593 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 117/231 (50%), Positives = 158/231 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEI SH+L+LR GMI + + G+Y++LPLG + L V IIREE Sbjct: 25 MRFSKAYIKTLKETPKEAEIISHQLLLRAGMIKKLASGLYTYLPLGFRTLKKVENIIREE 84 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ +P LQ A+LW ESGR++ G+EM+RL DR+ + + GPT+EEV+TDI R+ Sbjct: 85 MDRAGSQELLMPVLQPAELWQESGRWNVMGEEMVRLKDRHQRDFVLGPTNEEVITDIVRN 144 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ K RDE RPRFG+MRSREF+MKDAYSF + E + M + Sbjct: 145 DISSYKSLPINLYHIQTKVRDERRPRFGLMRSREFIMKDAYSFHTSQESLDEEFENMKNT 204 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S Sbjct: 205 YTRIFERCGLKFRPVEADSGAIGGSGSQEFHVLAESGEDEIIYSDGCSYAA 255 Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 69/185 (37%), Positives = 101/185 (54%), Gaps = 3/185 (1%) Query: 259 TSDVHNEKLFDSLPE--NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 D+ K + P K SARGIE GHIF G KYS + A++ G+ + MG Sbjct: 406 VKDIRLVKAGEDCPRSNGKLHSARGIECGHIFKLGDKYSKALGASYLDEKGESKIMLMGC 465 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R +AA IE ++D GIIWP ++AP+ + +I + EKIY +L+ Sbjct: 466 YGIGVGRTMAAAIEQNYDEHGIIWPSALAPYLVDVIPANIKNAEQMQLAEKIYEQLNAEH 525 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D DD E+ G +F ADL+GFP +VI G K +++ VE+K R TG ++ ++E+I+ Sbjct: 526 LDAMLDDRDERPGFKFKDADLIGFPFKVICGKK-AAENIVELKIRKTGETFEIPVDEIIS 584 Query: 437 YASHR 441 Sbjct: 585 KIKDL 589 >gi|291279885|ref|YP_003496720.1| threonyl-tRNA synthetase [Deferribacter desulfuricans SSM1] gi|290754587|dbj|BAI80964.1| threonyl-tRNA synthetase [Deferribacter desulfuricans SSM1] Length = 640 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 83/438 (18%), Positives = 155/438 (35%), Gaps = 39/438 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E RD L L + + G+ W P G + + A +EE + G Sbjct: 229 YLKRLEEAKKRDHRKLGKDLELFSTF-DEIGAGLICWFPKGARIRSIIEAFWKEEHFKNG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + + LW SG Y + M D + P + I++S ++SY Sbjct: 288 YEMLYTPHIGKSTLWETSGHLAFYQENMYSPMDIDGNEYFIKPMNCPFHIMIYKSKVRSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + ++ +R E G++R R F DA+ + ++ LR+ Sbjct: 348 RDLPLRWAELGTVYRYERSGVLHGLLRVRGFTQDDAHIICTQEQIIDE-IKEVLNFSLRM 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G +SI + P + S D Sbjct: 407 WKAFGFESIKGYIATRPEKS-----------------VGDDAMWEKATQSLEGAIKDSGI 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D++ +++ + F ++ + T+ Sbjct: 450 DFEIDEGGGAFYGPKIDL---KIKDAIGREWQMTTIQFD----FNLPERFDM----TYID 498 Query: 305 ADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + + +G++ V+ + G IW + I + Sbjct: 499 KDGKEKRPFMVHRALLGSLERFFGVLIEHYAGAFPIW------LAPIQVRIINVSDAQYE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C++I +L + G V +D E+IG + A L P +I+G+ V V ++ R Sbjct: 553 YCKEIEKKLKEEGIRVEFDSRNEKIGYKIREAQLQKIPHMIIIGNNEVEAKTVSVRLRNG 612 Query: 424 GIREDMSLEEVINYASHR 441 + ++ E I+ Sbjct: 613 ENKNNLDFYEYISVLKEL 630 >gi|316984142|gb|EFV63120.1| prolyl-tRNA synthetase [Neisseria meningitidis H44/76] Length = 599 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 122/273 (44%), Positives = 171/273 (62%), Gaps = 5/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 30 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 89 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 90 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 149 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 150 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYQDMYDA 209 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 210 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIELAPTL 268 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + + + N K DSL + Sbjct: 269 PLKGERAAAQAELV----KVHTPNVKTIDSLVD 297 Score = 160 bits (404), Expect = 5e-37, Method: Composition-based stats. Identities = 69/229 (30%), Positives = 111/229 (48%), Gaps = 7/229 (3%) Query: 222 FCSKDFMDFPIPSENTDFDDIISLNSIVEQW----TAPYAATSDVHNEKLFDSLPEN--K 275 F K + DF + + A D+ N D P+ + Sbjct: 370 FAGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEFVDLRNVVEGDESPDGQGR 429 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D Sbjct: 430 LKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDE 489 Query: 336 KGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KGIIW ++APF++ ++ + R+A +KIYA L G DV DD E+ G Sbjct: 490 KGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERAGVLLND 549 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 ++LLG P ++++G + + + VE R + +++ E++ + + Sbjct: 550 SELLGIPHRIVIGDRALKEGNVEYAERRDNEAQAVAIGEIVARVTASLN 598 >gi|239831910|ref|ZP_04680239.1| threonyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301] gi|239824177|gb|EEQ95745.1| threonyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301] Length = 674 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 78/445 (17%), Positives = 151/445 (33%), Gaps = 40/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD ++ L + G+ W G K N+ + +R + Sbjct: 249 QAYLHMLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 306 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 307 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDETDDDRVFALKPMNCPGHVQIF 366 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F + + Sbjct: 367 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRIN 426 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G + I ++ + P S E A++ V + Sbjct: 427 -DLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMSVL------------DQI 473 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 ++ A Y + L D++ + ++ FG Sbjct: 474 QQQSNNIKTGVLPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------ 524 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + D + + G+M ++ + G +W V ++ Sbjct: 525 --AFYIDKDSEKRQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATIT---- 578 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + A+L G V D E+I + L P+ ++ G + ++ V Sbjct: 579 --SDADEYAAQAAAKLKAAGLQVATDLRNEKINYKVREHSLQKVPVILVCGKREAEENTV 636 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + +E M+L+E I Sbjct: 637 NMRRLGSRDQESMTLDEAIARLVEE 661 >gi|164685973|ref|ZP_01946163.2| threonyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177'] gi|212218739|ref|YP_002305526.1| threonyl-tRNA synthetase [Coxiella burnetii CbuK_Q154] gi|164601497|gb|EAX33218.2| threonyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177'] gi|212013001|gb|ACJ20381.1| threonyl-tRNA synthetase [Coxiella burnetii CbuK_Q154] Length = 660 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 84/447 (18%), Positives = 148/447 (33%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K +L L+E RD + + K+ L S G W P G + + IR Sbjct: 235 KALKAYLYRLEEAEKRDHRLLAKKMDLF--HFQPESPGNVFWHPNGWSIILQMREYIRHI 292 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G E+ P L A LW +SG + +G ++ L + + P IF Sbjct: 293 THKYGYQEVHTPQLIDASLWDKSGHLEKFGDDIFSLPLEP-QQYVIKPMSCPAHVQIFNQ 351 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + + R+E G+MR R F+ DA+ F + + Sbjct: 352 GVKSYRDLPLRYAEFGACHRNEPSGTLHGLMRLRGFVQDDAHIFCTEDQIQSE-VSAFID 410 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + + + P S E A+ + F K +P E Sbjct: 411 QLHEVYADFGFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEAFNRKGVEWDILPGE---- 466 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 A Y + L D L + ++ G Sbjct: 467 -------------GAFYGPKIEF---SLRDCLGRIWQCGTVQVDFSVPERLG-------- 502 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + DG + +G+ ++ GK +W V +++ Sbjct: 503 AHYIAEDGSKKPPVMIHRAILGSFERFLGILLEESAGKLPLWLAPVQVVVMNIT------ 556 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D + L +G D E+IG + + P V++G + V+D + + Sbjct: 557 DRQADYVGQTVENLQNLGIRAHSDLRNEKIGFKIREHTIARVPYLVVIGDREVADKTLSV 616 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + ++LEE S Sbjct: 617 RALEDEASTTITLEEFARQLKAEISQR 643 >gi|148979813|ref|ZP_01815720.1| prolyl-tRNA synthetase [Vibrionales bacterium SWAT-3] gi|145961607|gb|EDK26907.1| prolyl-tRNA synthetase [Vibrionales bacterium SWAT-3] Length = 572 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 117/277 (42%), Positives = 163/277 (58%), Gaps = 5/277 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHSRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY M + Sbjct: 121 EVNSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFSMMDAYSFDIDKEGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN---- 236 Y F R+GL+ P+ A+SG IGG S EF VLA++GE + D+ E Sbjct: 181 YCNAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAF-STESDYAANIEKAEAL 239 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 ++ + +E P A T E+ ++ + Sbjct: 240 APTEEAAAPTQEMELVDTPNAKTIAELVEQHGLAIEK 276 Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 67/191 (35%), Positives = 113/191 (59%), Gaps = 3/191 (1%) Query: 257 AATSDVHNEKLFD--SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A D+ N D + RGIEVGHIF G YS M+ G DGK+ ++M Sbjct: 382 AQVEDLRNVIEGDLSPCGQGTLQLKRGIEVGHIFQLGNVYSQAMNCGVLGPDGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVA+ IE +HD GIIWPD++APF+++++ + + ++A EK+YA L+ Sbjct: 442 GCYGIGVSRVVASAIEQNHDKYGIIWPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G +V +DD E+ G F+ +L+G P +++G + + + E K+R G +E ++++ Sbjct: 502 AMGIEVLFDDRKERPGVMFSDIELIGIPHTIVIGDRSMKEGNFEYKNRRAGTKEAVAIDS 561 Query: 434 VINYASHRFSN 444 ++ + + +F+ Sbjct: 562 IVEHVTSQFAK 572 >gi|330720665|gb|EGG98912.1| Prolyl-tRNA synthetase [gamma proteobacterium IMCC2047] Length = 576 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 119/235 (50%), Positives = 161/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +++ + L+E+P DA + SHKLMLR GMI + + G+Y+W PLG + L IIREE Sbjct: 1 MRATQFPINTLKESPADAAVISHKLMLRAGMIRRLAAGLYTWSPLGLRVLRKSENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW E+GR+ +G E+LR+ DR+ + GPTHEEV+TD+ R+ Sbjct: 61 MNRAGALELLMPAVQPAELWEETGRWGQFGDELLRVKDRHGREFCIGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE RPRFGVMRSREFLMKDAYSF L E + +Y+ M+ + Sbjct: 121 ELSSYKQLPVNFYQIQTKFRDERRPRFGVMRSREFLMKDAYSFHLDAESLQQTYDAMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y R+F R+GL + A+SG IGG S EF VLA++GE + S D+ E Sbjct: 181 YCRVFERMGLVFRAVDADSGSIGGSQSQEFHVLAESGEDLIAFSDS-SDYAANIE 234 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 105/189 (55%), Gaps = 5/189 (2%) Query: 259 TSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ D K V RGIEVGHIF G KY+ M+AT G+ + MG Sbjct: 386 VADIREVVEGDPSPCGNGKLVFKRGIEVGHIFQLGQKYAAAMNATVLNEKGQAQVMTMGC 445 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG RVVAA IE ++D GIIWP +APF++ ++ + + ++ ++Y L ++ Sbjct: 446 YGIGVTRVVAAAIEQNNDDNGIIWPAGLAPFQVGIVPMNYDKSEQVKETANRVYQELKEL 505 Query: 376 GCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G DV+ DD + G +FA DL+G P ++++ + + ++++E + R + R++++ ++ Sbjct: 506 GIDVYMDDRDKKTSPGVKFADMDLIGIPHRIVISDRGLKENQIEYQERRSQERQNLAADQ 565 Query: 434 VINYASHRF 442 VI + Sbjct: 566 VIAFIKETL 574 >gi|237739058|ref|ZP_04569539.1| prolyl-tRNA synthetase [Fusobacterium sp. 2_1_31] gi|229423658|gb|EEO38705.1| prolyl-tRNA synthetase [Fusobacterium sp. 2_1_31] Length = 567 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 125/276 (45%), Positives = 167/276 (60%), Gaps = 4/276 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEIASHKLMLR MI + + GIY++LPLG + + + IIREE Sbjct: 1 MRFSKAYIKTLKETPKEAEIASHKLMLRAAMIKKLASGIYAYLPLGYRTIRKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR+D G EMLRL DR+++ + PT EE++T I RS Sbjct: 61 MDRAGALELLMPVVQPAELWQESGRWDVMGAEMLRLKDRHERDFVLSPTQEEMITSIVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ KFRDE RPRFG+MR REF MKD YSF + E + M + Sbjct: 121 DISSYKSLPLNLYHIQTKFRDERRPRFGLMRGREFTMKDGYSFHTSQESLDEEFLNMRDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S ++ E + Sbjct: 181 YTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYSD-GSEYAANIEKAVSE 239 Query: 241 DIISLN---SIVEQWTAPYAATSDVHNEKLFDSLPE 273 I VE P T + + L L Sbjct: 240 LINPPKEDLREVELVHTPDCPTIESLAKYLDIPLER 275 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 73/186 (39%), Positives = 102/186 (54%), Gaps = 2/186 (1%) Query: 259 TSDVHNEKLFDSLP-ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ ++ D+ K SARGIE G IF G KYS M+AT+ +GK Y+ MG Y Sbjct: 381 VADIRKVRVGDNCITGGKLHSARGIECGQIFKLGDKYSKAMNATYLDENGKTQYMLMGCY 440 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R +AA IE ++D GIIWP S+AP+ + +I ++ EKIY L Sbjct: 441 GIGVTRTMAAAIEQNNDENGIIWPVSIAPYIVDVIPANIKNEGQVSLAEKIYNELQAEDI 500 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 DV DD E+ G +F ADL+GFP +V+VG + + VE+K R TG ++S EV+ Sbjct: 501 DVMLDDRDEKPGFKFKDADLIGFPFKVVVGKR-ADEGIVEVKIRKTGETLEVSESEVVAK 559 Query: 438 ASHRFS 443 Sbjct: 560 IKELMK 565 >gi|257065041|ref|YP_003144713.1| prolyl-tRNA synthetase, family II [Slackia heliotrinireducens DSM 20476] gi|256792694|gb|ACV23364.1| prolyl-tRNA synthetase, family II [Slackia heliotrinireducens DSM 20476] Length = 570 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 109/260 (41%), Positives = 167/260 (64%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S ++P L+E+P DA+I S KL+ R GMI + + G+YS+LPLG + L + I+REE Sbjct: 11 RMSTMYVPTLKEDPSDADIPSAKLLTRAGMIRKEAAGLYSFLPLGLRVLRKIENIVREEM 70 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ +P +QSADLW +SGR+ +YG+EM+ + DR+D GPT EEV+TD+ ++ Sbjct: 71 DSHGGEELLMPFVQSADLWRQSGRWGAYGEEMMTMRDRHDNEFCLGPTAEEVITDLVKNE 130 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 ++SY++LP Y IQLKFRDE RPRFG++RSREF+MKDAYSFD EG + +Y M +Y Sbjct: 131 LRSYKDLPKNLYHIQLKFRDERRPRFGLLRSREFIMKDAYSFDKDQEGLEVNYQLMRDAY 190 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 R+ R+G++ ++A+ G IGG+ + EF+ LA+TGE ++ + + Sbjct: 191 SRMCERMGMEYRIVQADPGEIGGNGTEEFMTLAETGEAELVYCDCGYAADVEVGECHPNP 250 Query: 242 IISLNSIVEQWTAPYAATSD 261 + + +E+ P T + Sbjct: 251 VGYVGDTMEKIATPGLHTIE 270 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 70/187 (37%), Positives = 107/187 (57%), Gaps = 2/187 (1%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 A D+ D+ P +ARGIEVG IF GTKYS M A F DG + MG Sbjct: 384 AWGDLCTVVAGDACPCCGKPLQAARGIEVGQIFKLGTKYSEAMGALFMDEDGTEKPFIMG 443 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YG+G R +AA +E SHD GIIWP +AP +++I + +A E + A+L+ Sbjct: 444 CYGVGVSRCMAAAVEQSHDDMGIIWPVGIAPAHVAVIPLSTKPDEVTEAAEDVAAKLAAA 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G +FA DL+G+P QV++G + ++ VE+K+R TG + D+++++V+ Sbjct: 504 GLEVCIDDRDERAGVKFADNDLIGWPAQVVIGKRGLAAGTVEVKNRKTGEKTDVAVDDVV 563 Query: 436 NYASHRF 442 ++ Sbjct: 564 SFVESLL 570 >gi|237743345|ref|ZP_04573826.1| prolyl-tRNA synthetase [Fusobacterium sp. 7_1] gi|229433124|gb|EEO43336.1| prolyl-tRNA synthetase [Fusobacterium sp. 7_1] Length = 567 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 120/251 (47%), Positives = 164/251 (65%), Gaps = 1/251 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEIASHKLMLR GMI + + GIY++LPLG + + + I+REE Sbjct: 1 MRFSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLASGIYAYLPLGYRTIRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR+D G EMLRL DR+++ + PT EE++T I RS Sbjct: 61 MDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKDRHERDFVLSPTQEEMITAIVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ KFRDE RPRFG+MR REF MKDAYSF + E + M + Sbjct: 121 DISSYKSLPINLYHIQTKFRDERRPRFGLMRGREFTMKDAYSFHTSQESLDEEFLNMRDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S ++ E + Sbjct: 181 YTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYSD-GSEYAANIETAVSE 239 Query: 241 DIISLNSIVEQ 251 I +++ Sbjct: 240 LINPPKEELKE 250 Score = 169 bits (428), Expect = 8e-40, Method: Composition-based stats. Identities = 75/186 (40%), Positives = 105/186 (56%), Gaps = 2/186 (1%) Query: 259 TSDVHNEKLFDSLP-ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K+ ++ K SARGIE G IF G KYS M+AT+ G+ HY+ MG Y Sbjct: 381 VADIRKVKVGENCITGGKLHSARGIECGQIFKLGDKYSKAMNATYLDEKGQSHYMLMGCY 440 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R +AA IE +D GIIWP S+AP+ + +I + ++ + EKIY L + Sbjct: 441 GIGVTRTMAAAIEQYNDENGIIWPVSIAPYIVDVIPVNIKNEAQVNLAEKIYNNLQEEKI 500 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 DV DD E+ G +F ADL+GFP +V+VG K + VE+K R TG ++S E+IN Sbjct: 501 DVMLDDRDEKPGFKFKDADLIGFPFKVVVGKK-AEEGIVELKIRKTGETFEISQNEIINK 559 Query: 438 ASHRFS 443 Sbjct: 560 IKELMK 565 >gi|298384716|ref|ZP_06994276.1| threonine--tRNA ligase [Bacteroides sp. 1_1_14] gi|298262995|gb|EFI05859.1| threonine--tRNA ligase [Bacteroides sp. 1_1_14] Length = 646 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 76/445 (17%), Positives = 149/445 (33%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L KG+ WLP G + +R Q R Sbjct: 230 EYLVLLEEAKKRDHRKIGKEMQLFM-FSETVGKGLPMWLPKGTALRLRLQEFLRRIQTRY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + L+V SG Y YGK+ + + P + +I+++ Sbjct: 289 DYQEVITPPIGNKLLYVTSGHYAKYGKDAFQPIHTPEEGEEYFLKPMNCPHHCEIYKNFP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F + + ++ Sbjct: 349 RSYKDLPLRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDE-FLRVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + ++ + D + + D + + Sbjct: 408 SIVFRSMNFQNFEAQISLR--------------DKVNREKYIGSDDNWEKAEQAIIEACE 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + +E A Y D + D++ ++ ++ Sbjct: 454 EKGLPAKIEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFEL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G+D + H + G+M AV+ GK +W + I + Sbjct: 503 EYMGSDNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LTPDQVAILPISE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + E++ L DD E+IG + ++ P +IVG K + +V ++ Sbjct: 557 KFNEYAEQVKMYLKMHEIRAIVDDRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVSVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M EE + N Sbjct: 617 RQGEGDKGTMKYEEFAKILNEEVQN 641 >gi|330813582|ref|YP_004357821.1| threonyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063] gi|327486677|gb|AEA81082.1| threonyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063] Length = 638 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 74/439 (16%), Positives = 154/439 (35%), Gaps = 39/439 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD + L + S G W G + +R++Q Sbjct: 231 EYLHNLEEAEKRDHRKLGKTMDLF--HFQEESPGAVFWHQKGWALFQTLVDFMRQKQLEA 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E++ P + LW +SG ++ + + M + +++ P + I+ +KS Sbjct: 289 GYQEVNTPEIIDRVLWEKSGHWEKFQEYMYTTSTPDERTFAIKPMNCPGHCQIYNQGLKS 348 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 Y++LP + R E G+MR R F DA+ F + ++ S L Sbjct: 349 YKDLPLKLSEFGKVHRYEPSGSLHGLMRVRSFTQDDAHIFCTEDQITEESVKVT-KLILD 407 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I+ G ++I ++ P D + Sbjct: 408 IYKAFGFENITLKYADRPAKR-----------------VGDDSVWDQSEKALLEAIKASK 450 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 +I + A Y + L D++ + + +++ AT+ Sbjct: 451 VDYTINKGEGAFYGPKIEF---VLRDAIGRDWQCGTLQVDLNLPGRLD--------ATYV 499 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DGK + G++ ++ + P ++P +++++ I Sbjct: 500 DKDGKKKTPVMLHRALFGSLERFTGILI---EHYAGKLPLWLSPVQVAILPIN---DEHH 553 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D ++I +L K+ D E+I + + P+ +I GSK V + + ++ Sbjct: 554 DYAKEILNQLEKISIRPIIDLRNEKINYKIREHSVGKIPILMICGSKEVQNKTITLRRLG 613 Query: 423 TGIREDMSLEEVINYASHR 441 ++ SLE++I+ S Sbjct: 614 QEDQQTESLEKIISSLSKE 632 >gi|319638108|ref|ZP_07992872.1| prolyl-tRNA synthetase [Neisseria mucosa C102] gi|317400753|gb|EFV81410.1| prolyl-tRNA synthetase [Neisseria mucosa C102] Length = 570 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 163/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V I+REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 121 EVNSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYQDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL+ P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIE 234 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 69/226 (30%), Positives = 108/226 (47%), Gaps = 7/226 (3%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQW----TAPYAATSDVHNEKLFDSLPE--NKRVS 278 K + DF + + A D+ N D P+ + Sbjct: 344 KVYADFATEKGADWIIGANEDDYHYTGFNFGRDAAEPEFVDLRNVIEGDISPDEQGRLKL 403 Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 404 ARGIEVGHVFQLRDKYAKAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 463 Query: 339 IWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IW ++APF++ ++ + R+A +KIYA L G DV DD E+ G ++L Sbjct: 464 IWTKAMAPFEVVIVPMNYKKSDAVREAADKIYAGLLAAGADVLLDDRDERAGVLLNDSEL 523 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 LG P ++++G + + + VE R + +++ EV+ Sbjct: 524 LGIPHRIVIGDRALKEGNVEYAERRDNQAQAVAVSEVVAKVLAALK 569 >gi|303258207|ref|ZP_07344214.1| proline--tRNA ligase [Burkholderiales bacterium 1_1_47] gi|302858960|gb|EFL82044.1| proline--tRNA ligase [Burkholderiales bacterium 1_1_47] Length = 582 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 129/275 (46%), Positives = 174/275 (63%), Gaps = 5/275 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++F+ +E P DAEI S KLMLR GMI + + G+Y+++P+G ++L + I+REE Sbjct: 1 MRAKQFFISTQKEAPADAEIVSQKLMLRAGMIRKLAAGVYNYMPMGLRSLKKIERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GAIE+ +P +Q A+LW E+GR+ YG E+LR DR+D+ + PT EEV+TDI R Sbjct: 61 MDRAGAIELLMPIVQPAELWQETGRWQKYGAELLRFKDRHDRDFVLQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKS+R LP FYQIQ KFRDE RPRFGVMR R+F+MKDAYSFD T E + SY+KMF + Sbjct: 121 EIKSWRQLPVNFYQIQTKFRDERRPRFGVMRGRDFVMKDAYSFDRTAEDAGKSYDKMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y RIF RLGL +RA+SG IGG S EF V+ADTGE + D ++ E + Sbjct: 181 YCRIFDRLGLVYRAVRADSGSIGGSRSQEFQVIADTGEDLIVFCPD-SEYAANIELAEAP 239 Query: 240 ---DDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + +E+ P ++ E L L Sbjct: 240 CLIEKRAEATETMEKVPTPGRDKCELVVELLNKPL 274 Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 71/189 (37%), Positives = 106/189 (56%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ K RGIEVGH+F+ G KYS PM+AT+ +GK +QMG Sbjct: 392 VVADIRNVVEGDVSPDGKGTLKMQRGIEVGHVFFLGDKYSAPMNATYLDENGKPQLLQMG 451 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSK 374 YGIG R++ A IE HD KGIIWPDS+APF + + + + + A ++Y RL + Sbjct: 452 CYGIGISRLLGAAIEQGHDDKGIIWPDSIAPFTVVICPVGYDKSEEVQKASNELYGRLRE 511 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV DD G + G FA +L+G P +V +G + + + +VE HR E++ + E+ Sbjct: 512 AGIDVILDDRGLRPGVMFADWELIGVPHRVTIGDRGLKNGEVEYAHRGDLQNENVPVSEI 571 Query: 435 INYASHRFS 443 + + Sbjct: 572 ADKLIAKIK 580 >gi|21674935|ref|NP_663000.1| threonyl-tRNA synthetase [Chlorobium tepidum TLS] gi|34222753|sp|Q8KAN0|SYT_CHLTE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|21648164|gb|AAM73342.1| threonyl-tRNA synthetase [Chlorobium tepidum TLS] Length = 657 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 73/453 (16%), Positives = 152/453 (33%), Gaps = 41/453 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + L+E RD +L L + + G+ WLP G + + ++ E Sbjct: 237 KLLKEHIARLEEARKRDHRKLGAELGLFM-LTPEVGSGLPIWLPNGAIIRNELETFLKAE 295 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML---RLADRNDKA--MIYGPTHEEVMT 115 Q + G + + P + + +L+ SG Y Y D + + P + Sbjct: 296 QRKRGYVPVYTPHIGNIELYKRSGHYPYYSDSQFPPLTYKDETGREEQYLLKPMNCPHHH 355 Query: 116 DIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSY 174 I+ ++SYR+LP + +R E G++R+R F D++ + + Sbjct: 356 LIYSQTLRSYRDLPIRLTEFGTVYRHEQSGELNGLVRARGFTQDDSHIYCRPDQLVDE-I 414 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS 234 +F+ LG + R +++ + + Sbjct: 415 CNAIDLTRFVFNTLGFDEVETRLSLHD-------------PENQSKYGGTAEVWGQAEKD 461 Query: 235 ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY 294 D + I + Y D + D++ ++ ++ Sbjct: 462 VKEAADRMGIKYFIGIGEASFYGPKIDFI---VRDAIGRKWQLGTVQVDYVMP------- 511 Query: 295 SLPMSATFKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 ++ G+DG+ H + G+M V+ G +W V + + Sbjct: 512 -ERFDLSYIGSDGQKHRPVVIHRAPFGSMERFIGVLIEHTAGNFPLWLAPVQAVVLPIA- 569 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 + D ++YA+L + G D E+IG + A+L P +++G Sbjct: 570 -----EEVHDYAREVYAKLHEAGIRTELDLRSEKIGKKIREAELSKIPAMLVIGRNEQEK 624 Query: 414 SKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 +V ++ G ++E+I + R Sbjct: 625 GEVSLRRHRKGDEGSFGVDELIARLCEE-RDRR 656 >gi|310641908|ref|YP_003946666.1| prolyl-tRNA synthetase 1 [Paenibacillus polymyxa SC2] gi|309246858|gb|ADO56425.1| Prolyl-tRNA synthetase 1 [Paenibacillus polymyxa SC2] Length = 581 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 120/245 (48%), Positives = 161/245 (65%), Gaps = 2/245 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ L L+E P +AE+ SH+LMLR G I Q + G+Y+++PLG++ L V I+R+E Sbjct: 1 MRQSQLLLTTLREAPAEAEVISHQLMLRAGFIRQLAAGMYTYMPLGRRVLRKVEQIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P LQ +LW ESGRYD YG E++RL DR+D+ GPTHEEV+T + R+ Sbjct: 61 MDRAGAGELLMPVLQPTELWQESGRYDVYGPELMRLQDRHDREFALGPTHEEVITSLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP T YQIQ KFRDE RPRFG++RSREFLMKDAYSFD G H+Y MF + Sbjct: 121 EVNSYRKLPVTLYQIQTKFRDERRPRFGLLRSREFLMKDAYSFDANWAGLDHTYWTMFQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDL-SHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y RIF R L + A++G IGG+ +HEF+ LA+ GE + D+ E + Sbjct: 181 YQRIFTRCSLNFRAVEADAGAIGGEGETHEFMALAEIGEDTIVACTCC-DYAANLEKAEP 239 Query: 240 DDIIS 244 S Sbjct: 240 RTTGS 244 Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats. Identities = 64/176 (36%), Positives = 99/176 (56%), Gaps = 1/176 (0%) Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 E K RGIE+GH+F GTKYS + ATF A G D + MG YGIG R+++A Sbjct: 406 CSRCDEGKLELHRGIEIGHVFKLGTKYSEKLGATFLDASGTDQVMIMGCYGIGVSRILSA 465 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++E +HD G+IWP ++APF++ +I I D++ E +Y++L G +V DD E+ Sbjct: 466 IVEQNHDQNGMIWPHALAPFQVHIIPISVKDRLQMQIAEDLYSQLQDRGVEVLLDDREER 525 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G +F +DL+G P +++VG K KVE R + +E + + +V + Sbjct: 526 PGVKFKDSDLVGIPARIVVG-KDAEHGKVEFVERRSSHKESIHIHDVERRILNLIQ 580 >gi|288553027|ref|YP_003424962.1| prolyl-tRNA synthetase [Bacillus pseudofirmus OF4] gi|288544187|gb|ADC48070.1| prolyl-tRNA synthetase [Bacillus pseudofirmus OF4] Length = 572 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 121/278 (43%), Positives = 167/278 (60%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+ LP L++ P DA+I SH+LMLR GMI Q + G+YS+LPL ++ L V +I+REE Sbjct: 1 MRQRSLLLPTLRDVPADADIISHQLMLRAGMIRQIAAGVYSYLPLAKRVLHKVESIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+++PT+ A+LW E+GR+D G E++RL DR+D+ GPTHEEV+T I R Sbjct: 61 MDAAGAQELTMPTMHPAELWQETGRWDKMGGELMRLKDRHDRDFALGPTHEEVITSILRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ KFRDE RPRFG++R REF+MKDAYSF TPE +Y +M+ + Sbjct: 121 SISSYKKLPVNLYQIQTKFRDERRPRFGLLRGREFMMKDAYSFHATPESLDEAYKEMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GL P+ A+SG IGG +HEF+ LAD GE + S + Sbjct: 181 YSRIFSRAGLTFRPVIADSGAIGGKDTHEFMALADVGEDTIAYSDESDYAANIEMAAVKI 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS 278 + + + E T ++ E ++ Sbjct: 241 NYVKPDVEAEDRTKVDTGSAKTIEEVSTALSIREDQII 278 Score = 162 bits (411), Expect = 9e-38, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 101/189 (53%), Gaps = 1/189 (0%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A E + A+GIEVG +F GT YS M+AT +GK Sbjct: 374 DFKVDQYADLRFIKEGDPSPCGKGTIRFAQGIEVGQVFKLGTVYSEAMNATILDENGKTQ 433 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + MG YG+G R VAA+IE HD GI+WP SVAP+ + L+ + + + + E++Y Sbjct: 434 PMIMGCYGVGVSRTVAAIIEQHHDENGIVWPPSVAPYDVHLLTLNSKNAEQSELSEELYQ 493 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L K G DV +DD E+ G +F +DL+G PL+V VG + ++ VE+K R +G +++ Sbjct: 494 SLKKTGFDVLYDDRPERAGVKFKDSDLIGIPLRVSVGKR-AAEGIVEVKIRKSGEVIEVA 552 Query: 431 LEEVINYAS 439 + ++ Sbjct: 553 VADLAEVLK 561 >gi|89100585|ref|ZP_01173444.1| threonyl-tRNA synthetase [Bacillus sp. NRRL B-14911] gi|89084689|gb|EAR63831.1| threonyl-tRNA synthetase [Bacillus sp. NRRL B-14911] Length = 423 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 78/432 (18%), Positives = 155/432 (35%), Gaps = 41/432 (9%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + R+ +L L M + + G+ +LP G + + + + +++ ++ G E+ Sbjct: 25 EAEKRNHRKLGAELELF--MFREEAPGMPFYLPKGMQVRNILENLWKQKHHKAGYHEVKT 82 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + LW +SG +D Y + M ++ P I+ S +SYR LP Sbjct: 83 PIMMKQALWEQSGHWDHYHENMYFSK-VDEHDYAIKPMSCPGAVLIYSSKRRSYRELPLR 141 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + ++ L R EL G++R R F DA+ + + K K+ + G Sbjct: 142 YAELGLVHRHELSGSLNGLLRVRSFTQDDAH-LFVREDQIKEEAAKVLELVHEFYSLFGF 200 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + + + P EF+ +T + S + + I Sbjct: 201 EY-KVELSTRP------EEFMGSEET-----------WNLAEASLESVLQERGIPFEINS 242 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D H + DSL + + ++ FG + + G D H Sbjct: 243 GDGAFYGPKIDFH---ITDSLGRSWQCGTVQLDFQMPEQFGCQ--------YIGEDNLAH 291 Query: 311 YV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + G++ A++ + G W + + ++ Sbjct: 292 RPIMIHRAIYGSIERFLAILIEHYAGDFPFW------LSPVQAMVLPVSEAHIGYALEVK 345 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 ARL + GC + D E++G + A+L P +I+G K + ++ + G + Sbjct: 346 ARLEEAGCRIDIDSRAEKLGLKIREAELQKVPYMIIIGEKEIEQGGAALRKKGAGNLGVL 405 Query: 430 SLEEVINYASHR 441 L+E+++ Sbjct: 406 HLQELLDRFRDE 417 >gi|256028463|ref|ZP_05442297.1| prolyl-tRNA synthetase [Fusobacterium sp. D11] gi|289766384|ref|ZP_06525762.1| prolyl-tRNA synthetase [Fusobacterium sp. D11] gi|289717939|gb|EFD81951.1| prolyl-tRNA synthetase [Fusobacterium sp. D11] Length = 567 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 120/251 (47%), Positives = 164/251 (65%), Gaps = 1/251 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEIASHKLMLR GMI + + GIY++LPLG + + + I+REE Sbjct: 1 MRFSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLASGIYAYLPLGYRTIRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR+D G EMLRL DR+++ + PT EE++T I RS Sbjct: 61 MDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKDRHERDFVLSPTQEEMITAIVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ KFRDE RPRFG+MR REF MKDAYSF + E + M + Sbjct: 121 DISSYKSLPINLYHIQTKFRDERRPRFGLMRGREFTMKDAYSFHTSQESLDEEFLNMRDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S ++ E + Sbjct: 181 YTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYSD-GSEYAANIETAVSE 239 Query: 241 DIISLNSIVEQ 251 I +++ Sbjct: 240 LINPPKEELKE 250 Score = 169 bits (428), Expect = 9e-40, Method: Composition-based stats. Identities = 75/186 (40%), Positives = 105/186 (56%), Gaps = 2/186 (1%) Query: 259 TSDVHNEKLFDSLP-ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K+ ++ K SARGIE G IF G KYS M+AT+ G+ HY+ MG Y Sbjct: 381 VADIRKVKVGENCITGGKLHSARGIECGQIFKLGDKYSKAMNATYLDEKGQSHYMLMGCY 440 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R +AA IE +D GIIWP S+AP+ + +I + ++ + EKIY L + Sbjct: 441 GIGVTRTMAAAIEQYNDENGIIWPVSIAPYIVDVIPVNIKNEAQVNLAEKIYNNLQEEKI 500 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 DV DD E+ G +F ADL+GFP +V+VG K + VE+K R TG ++S E+IN Sbjct: 501 DVMLDDRDEKPGFKFKDADLIGFPFKVVVGKK-AEEGIVELKIRKTGETFEISQNEIINK 559 Query: 438 ASHRFS 443 Sbjct: 560 IKELMK 565 >gi|301629969|ref|XP_002944104.1| PREDICTED: threonyl-tRNA synthetase-like [Xenopus (Silurana) tropicalis] Length = 841 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 85/444 (19%), Positives = 145/444 (32%), Gaps = 37/444 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD +L L I +H+ G W P G V +R Sbjct: 229 QQYLHMLEEAEKRDHRKLGRELDLF--HIDEHAPGTVFWHPKGWMLWQEVEQYMRRVYRD 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW ++G +D Y + M + + + P + IF+ IK Sbjct: 287 NGYQEVKGPQILDKTLWEKTGHWDKYRENMF-ITESEKRDYALKPMNCPGHILIFKQGIK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP F + R+E G+MR R F D + F T + + Sbjct: 346 SYRDLPLRFGEFGNCHRNEPTGGLHGIMRVRGFTQDDGHIFC-TEDMIQSEVATFTTLLQ 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 R++ G I R + P S E D + Sbjct: 405 RVYRDFGFTEILYRLSTRPEKRIGSEE-----------------SWDRAESALAEGLRAS 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + L D+L + ++ + A F Sbjct: 448 GCTFEYLPGEGAFYGPKIEY---VLKDALGREWQCGTIQVDPNMP--------ERLDAEF 496 Query: 303 KGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DG H + +G++ ++ G +W L A C Sbjct: 497 VGEDGARHRPIVLHRAIVGSLERFIGILIEQFAGALPVWL--APVQVAVLNITDAQADYC 554 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 R+ K++ L D E+I + L P ++VG K + V ++ R Sbjct: 555 REIAAKLHKALPNQSLRAVTDLRNEKITYKIREHALQKLPYILVVGDKEKAAGAVAVRAR 614 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 MS++ + + ++ Sbjct: 615 GNKDLGVMSIDAFVELIARDIASK 638 >gi|325923311|ref|ZP_08184984.1| prolyl-tRNA synthetase, family II [Xanthomonas gardneri ATCC 19865] gi|325546238|gb|EGD17419.1| prolyl-tRNA synthetase, family II [Xanthomonas gardneri ATCC 19865] Length = 564 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 116/235 (49%), Positives = 155/235 (65%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+REE Sbjct: 1 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR++ +G ++L++ DR ++ Y PT EE + R Sbjct: 61 MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYSPTAEEAAAEFARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF LT E Y+ M + Sbjct: 121 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDEDMAREYDNMRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL+ ++A+SG IGGD S EF V+A +GE + D+ E Sbjct: 181 YTRIFTRLGLEFRAVQADSGAIGGDASQEFHVIAASGEDSLAF-STASDYAANVE 234 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 1/166 (0%) Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 + ARGIEVGH+F G++Y+ + AT +GK ++MG YGIG R+VAA IE +H Sbjct: 397 GELRLARGIEVGHVFQLGSQYAQALQATVIDENGKLAVMKMGCYGIGISRIVAAAIEQNH 456 Query: 334 DGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 D GIIWP +AP+++ + I D A + L G + DD G + G+ F Sbjct: 457 DEAGIIWPAPMAPWQVVVCVINPKQDPQVIAAAGALLDELIAAGIEAALDDRGLRPGAMF 516 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 A +LLG P +V+V + ++ E + R E++ + + Sbjct: 517 ADMELLGIPHRVVVSERGLAAGTFEYRARTAEAAENLDKAGLFSRL 562 >gi|224499901|ref|ZP_03668250.1| prolyl-tRNA synthetase [Listeria monocytogenes Finland 1988] Length = 568 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 124/294 (42%), Positives = 168/294 (57%), Gaps = 5/294 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E YN M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--- 237 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D+ +E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYSD-ASDYAANTEMAPVL 239 Query: 238 -DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 L +E++ P + E L + + + ++ I Sbjct: 240 YMEKKSHELEKDLEKFVTPDQKSITDIVEFLEVPIEKTMKSMLYQVDDEVIMVL 293 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 65/180 (36%), Positives = 100/180 (55%), Gaps = 3/180 (1%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ ++ D P+ + V GIEVGHIF GTKYS M+AT +G+ + MG YG Sbjct: 383 DLRMIQVGDLSPDGQGVIKFAEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R+++A+ E S+D G +W ++PF + LI + + E +Y L G Sbjct: 443 IGVSRILSAIAEQSNDENGFVWDKQISPFDLHLIPVNMKSEEQVAFAETLYTSLQDAGFS 502 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G +FA ADL+G P+++ VG K ++ VE+K R TG ++ +E++N Sbjct: 503 VLIDDRAERAGVKFADADLIGLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDELLNTL 561 >gi|73919786|sp|Q83C10|SYT_COXBU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS Length = 651 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 83/447 (18%), Positives = 147/447 (32%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K +L L+E RD + + K+ L S G W P G + + IR Sbjct: 226 KALKAYLYRLEEAEKRDHRLLAKKMDLF--HFQPESPGNVFWHPNGWSIILQMREYIRHI 283 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G E+ P L A LW +SG + +G ++ L + + P IF Sbjct: 284 THKYGYQEVHTPQLIDASLWDKSGHLEKFGDDIFSLPLEP-QQYVIKPMSCPAHVQIFNQ 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + + R+E G+MR R F+ DA+ F + + Sbjct: 343 GVKSYRDLPLRYAEFGACHRNEPSGTLHGLMRLRGFVQDDAHIFCTEDQIQSE-VSAFID 401 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + + + P S E A+ + K +P E Sbjct: 402 QLHEVYADFGFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEALNRKGVEWDILPGE---- 457 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 A Y + L D L + ++ G Sbjct: 458 -------------GAFYGPKIEF---SLRDCLGRIWQCGTVQVDFSVPERLG-------- 493 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + DG + +G+ ++ GK +W V +++ Sbjct: 494 AHYIAEDGSKKPPVMIHRAILGSFERFLGILLEESAGKLPLWLAPVQVVVMNIT------ 547 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D + L +G D E+IG + + P V++G + V+D + + Sbjct: 548 DRQADYVGQTVENLQNLGIRAHSDLRNEKIGFKIREHTIARVPYLVVIGDREVADKTLSV 607 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + ++LEE S Sbjct: 608 RALEDEASTTITLEEFARQLKAEISQR 634 >gi|160900048|ref|YP_001565630.1| threonyl-tRNA synthetase [Delftia acidovorans SPH-1] gi|238687213|sp|A9C3D4|SYT_DELAS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|160365632|gb|ABX37245.1| threonyl-tRNA synthetase [Delftia acidovorans SPH-1] Length = 643 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 82/444 (18%), Positives = 141/444 (31%), Gaps = 37/444 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD +L L I +HS G W P G V +R Sbjct: 233 QQYLHMLEEAEKRDHRKLGRELDLF--HIDEHSPGTVFWHPKGWSLWQEVEQYMRRVYRD 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + LW ++G +D Y + M + + P + IF+ IK Sbjct: 291 NGYQEVKGPQILDKTLWEKTGHWDKYRENMFT-TESEKRDYALKPMNCPGHILIFKQGIK 349 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + + R+E G+MR R F D + F + Sbjct: 350 SYRDLPLRYGEFGQCHRNEPTGGLHGIMRVRGFTQDDGHVFCTEDQIQPEVLAFTT-LLQ 408 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +++ G I + + P S E D + + Sbjct: 409 KVYADFGFSDIIYKVATRPEARIGSDE-----------------SWDKAEAALINSLEAS 451 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I A Y + L D++ + ++ + A + Sbjct: 452 GCEYVISPGDGAFYGPKIEY---TLKDAIGRQWQCGTIQVDFSMP--------ERLDAEY 500 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DG H + +G++ ++ H G W L A Sbjct: 501 VGEDGDRHRPVMLHRAIVGSLERFIGILIEQHAGAMPTWL--APVQAAVLNITDAQADYV 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 R+ +K+ G V D E+I + L P ++ G K + V ++ R Sbjct: 559 REVAQKLQKAFPNQGLRVATDLRNEKITYKIREHSLQKLPYILVAGDKEKAAGAVAVRAR 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 MS++ I + + Sbjct: 619 GNKDLGVMSVDAFIELVAKDIAAK 642 >gi|269925242|ref|YP_003321865.1| threonyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798] gi|269788902|gb|ACZ41043.1| threonyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798] Length = 596 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 146/445 (32%), Gaps = 37/445 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y + + RD L L MI + G+ WLP G + I + + R Sbjct: 185 YLWRLEEAKRRDHRKIGRDLELF--MISDEVGPGLVLWLPNGSIIRRELENFIVKAEARE 242 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + L+ SG + Y M + + P I++ ++ Sbjct: 243 GYQHVYTPHIAKLGLYKTSGHWQHYRDAMFPPMVLEDGEEYELRPMTCPHHIMIYKHSLR 302 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP ++ +R E G+ R R F + DA+ F P+ K + ++ Sbjct: 303 SYRDLPLRIAELGTVYRYEKSGELTGMSRVRGFTINDAHIFCR-PDQLKEEFIRVIQLMH 361 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ +G R + + + + D++ Sbjct: 362 EVYRAVGFHDYVYRLSLRDPSDKE-------------KYVEGDEMWNNAENAIRQALDEL 408 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + E A Y DV + D L S ++ FY ++ + Sbjct: 409 GADYVEAEGEAAFYGPKLDVM---VRDVLGREFAASTNQLD----FYLPERFD----LEY 457 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 ADG+ + IG+M A + H G +W V I + Sbjct: 458 IDADGERRRPVMIHRAPIGSMERFFAFLTEQHAGAFPVWLSPVQVVVIPIA------DRH 511 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E++ + S+ V D E++ ++ A + P +IVG + V ++ R Sbjct: 512 IPYAEEVASAFSRHNVRVNVDARNERMNAKIRDAQMQKIPYMLIVGDREAQAGTVAVRKR 571 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + +++V+ + Sbjct: 572 SGEDLKGQPVQDVVQMVLDDIREYK 596 >gi|215919162|ref|NP_820316.2| threonyl-tRNA synthetase [Coxiella burnetii RSA 493] gi|206584046|gb|AAO90830.2| threonyl-tRNA synthetase [Coxiella burnetii RSA 493] Length = 660 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 83/447 (18%), Positives = 147/447 (32%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K +L L+E RD + + K+ L S G W P G + + IR Sbjct: 235 KALKAYLYRLEEAEKRDHRLLAKKMDLF--HFQPESPGNVFWHPNGWSIILQMREYIRHI 292 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G E+ P L A LW +SG + +G ++ L + + P IF Sbjct: 293 THKYGYQEVHTPQLIDASLWDKSGHLEKFGDDIFSLPLEP-QQYVIKPMSCPAHVQIFNQ 351 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + + R+E G+MR R F+ DA+ F + + Sbjct: 352 GVKSYRDLPLRYAEFGACHRNEPSGTLHGLMRLRGFVQDDAHIFCTEDQIQSE-VSAFID 410 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + + + P S E A+ + K +P E Sbjct: 411 QLHEVYADFGFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEALNRKGVEWDILPGE---- 466 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 A Y + L D L + ++ G Sbjct: 467 -------------GAFYGPKIEF---SLRDCLGRIWQCGTVQVDFSVPERLG-------- 502 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + DG + +G+ ++ GK +W V +++ Sbjct: 503 AHYIAEDGSKKPPVMIHRAILGSFERFLGILLEESAGKLPLWLAPVQVVVMNIT------ 556 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D + L +G D E+IG + + P V++G + V+D + + Sbjct: 557 DRQADYVGQTVENLQNLGIRAHSDLRNEKIGFKIREHTIARVPYLVVIGDREVADKTLSV 616 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + ++LEE S Sbjct: 617 RALEDEASTTITLEEFARQLKAEISQR 643 >gi|71898157|ref|ZP_00680343.1| Prolyl-tRNA synthetase, bacterial [Xylella fastidiosa Ann-1] gi|71732131|gb|EAO34187.1| Prolyl-tRNA synthetase, bacterial [Xylella fastidiosa Ann-1] Length = 564 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 114/223 (51%), Positives = 151/223 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+R+E Sbjct: 1 MRLSEFHLHTTKEIPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+EM +PT+Q +LW ES R++ +G ++L++ DR Y PT EE +TD R Sbjct: 61 MNRAGAVEMLLPTIQPRELWEESERWEKFGSQLLKIKDRKQAEYCYSPTAEEAVTDYVRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L Y M + Sbjct: 121 ELTSYKQLPVNFYQIQTKFRDEIRPRFGVMRAREFVMKDAYSFHLNDADLVREYENMRAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC 223 Y RIF RLGL+ ++A+SG IGGD S EF V+AD+GE + Sbjct: 181 YTRIFTRLGLEFRSVQADSGAIGGDASQEFHVIADSGEDVLAF 223 Score = 131 bits (329), Expect = 3e-28, Method: Composition-based stats. Identities = 64/184 (34%), Positives = 95/184 (51%), Gaps = 2/184 (1%) Query: 258 ATSDVHNEKLFD-SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D ++ K ARGIEVGH+F G KY+ M AT GK + MG Sbjct: 380 VVADIRNVIEGDRAVDGGKICIARGIEVGHVFQLGRKYTEAMKATVLDEYGKAVTMTMGC 439 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+VAA IE +HD GIIWP +AP+++++ I D V A E + A L Sbjct: 440 YGIGVSRIVAAAIEQNHDVAGIIWPAPIAPWQVAVCVINPKKDPVITAAAELLLAELQSA 499 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D DD G + G FA +L+G P +++V + ++ E + R T + E++ ++ Sbjct: 500 DVDTVLDDRGLRPGVMFADMELIGIPHRIVVSERGLAAGTYEYRARRTAMVENLDKTTLL 559 Query: 436 NYAS 439 Sbjct: 560 TRIK 563 >gi|150396275|ref|YP_001326742.1| threonyl-tRNA synthetase [Sinorhizobium medicae WSM419] gi|166225503|sp|A6U8C7|SYT_SINMW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|150027790|gb|ABR59907.1| threonyl-tRNA synthetase [Sinorhizobium medicae WSM419] Length = 660 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 80/444 (18%), Positives = 146/444 (32%), Gaps = 39/444 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD ++ L + G+ W G + ++ A +R Sbjct: 233 QYLHVLAEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHGKGWRIFQSLVAYMRRRLE-G 289 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIFR 119 E++ P + LW SG + Y M ++ +D+ P + IF+ Sbjct: 290 DYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHIQIFK 349 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 +KSYR LP + R E G+MR R F DA+ F + + Sbjct: 350 HGLKSYRELPVRLAEFGAVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKIN- 408 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L ++ G K I ++ + P S E A+ T+V I +++ Sbjct: 409 DLILSVYEDFGFKEIVVKLSTRPEKRVGSDELWDRAEAVMTEVL-------KTIEAQSEG 461 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 L A Y + L D++ + ++ FG Sbjct: 462 RIKTGIL----PGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------- 507 Query: 299 SATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 A + K V + G+M ++ + G +W + + Sbjct: 508 -AFYIDSESEKRQPVMIHRAICGSMERFLGILLENFAGHMPLW------ISPLQVVVATI 560 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D ++ RL G V D E+I + + P+ V+ G + + V Sbjct: 561 TSEADDYGREVAERLRDAGLTVETDFRNEKINYKVREHSVTKVPVIVVCGKREAEERSVN 620 Query: 418 IKHRLTGIREDMSLEEVINYASHR 441 I+ + + MSL+E + S Sbjct: 621 IRRLGSQAQTAMSLDEAVASLSAE 644 >gi|40062682|gb|AAR37595.1| threonyl-tRNA synthetase [uncultured marine bacterium 314] Length = 638 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 81/439 (18%), Positives = 154/439 (35%), Gaps = 39/439 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y L + + RD ++ L + S G W G + +R +Q + Sbjct: 231 EYLLRLEEIEKRDHRKLGKEMDLF--HFREESPGAVFWHHKGWTLFQTLVGYMRLKQKKA 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E++ P + +LW +SG ++ +G+ M + K P + IF +KS Sbjct: 289 GYKEINTPEILDKNLWEQSGHWEKFGENMFTSETPDKKTFAIKPMNCPGCLQIFNQGLKS 348 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + R E G++R R F DA+ F + + + L Sbjct: 349 YRDLPLRLSEFGKVHRYEPSGALHGLLRVRAFTQDDAHIFCTEDQITDEC-LSVTNLILE 407 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I+ LG K++ ++ P + D + Sbjct: 408 IYKDLGFKNVLLQYSDRP-----------------QKRVGDDKIWDKAESALLKAIKQSK 450 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I + A Y D L D++ + + +++ G A++ Sbjct: 451 LKYEINKGEGAFYGPKIDF---VLRDTIGRDWQCGTLQVDLNLPSRLG--------ASYV 499 Query: 304 GADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 +DG V + G++ ++ + GK +W + + + Sbjct: 500 SSDGSKKVPVMLHRALFGSLERFIGILIEHYAGKLPLWLAPIQAVVLPIA------SEFD 553 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +KI+ + K G + D ++I + L PL +I G K V V I+ Sbjct: 554 NYAKKIFEQCMKAGINTEVDLKNKKINYKIREHSLSKVPLLLICGEKEVKGKSVTIRKLG 613 Query: 423 TGIREDMSLEEVINYASHR 441 + +E +SL+ I S + Sbjct: 614 SEKQETLSLDRAIKKISQQ 632 >gi|241760072|ref|ZP_04758170.1| proline--tRNA ligase [Neisseria flavescens SK114] gi|241319526|gb|EER55956.1| proline--tRNA ligase [Neisseria flavescens SK114] Length = 595 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 118/235 (50%), Positives = 163/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V I+REE Sbjct: 26 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENIVREE 85 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 86 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 145 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 146 EVNSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYQNMYDA 205 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGLK P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 206 YCRIFTRLGLKFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIE 259 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 68/226 (30%), Positives = 110/226 (48%), Gaps = 7/226 (3%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQW----TAPYAATSDVHNEKLFDSLPE--NKRVS 278 K + DF + + A D+ N D P+ + Sbjct: 369 KVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEFVDLRNVIEGDISPDEQGRLKL 428 Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 429 ARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 488 Query: 339 IWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 +W ++APF++ ++ + + R+A +KIYA L G DV DD E+ G ++L Sbjct: 489 VWTKAMAPFEVVIVPMNYKKSEAVREAADKIYAELLAAGADVLLDDRDERAGVLLNDSEL 548 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 LG P ++++G + + + VE R + +++ EV+ + Sbjct: 549 LGIPHRIVIGDRALKEGNVEYAERRDNQAQAVAVSEVVAKVLTALN 594 >gi|218134037|ref|ZP_03462841.1| hypothetical protein BACPEC_01927 [Bacteroides pectinophilus ATCC 43243] gi|217991412|gb|EEC57418.1| hypothetical protein BACPEC_01927 [Bacteroides pectinophilus ATCC 43243] Length = 585 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 78/442 (17%), Positives = 163/442 (36%), Gaps = 34/442 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 L +L+E RD + L M+ +G+ +LP G + I++++ + G Sbjct: 172 LQLLEEAKERDHRKIGKDMGLF--MVDDLIGRGLPMFLPKGYVIWQELENYIKDKERKLG 229 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + + P + + +L+ SG +D Y + M D + ++ + P + I+ + + SY Sbjct: 230 YLHVMTPCIGTVNLYKTSGHWDHYKENMFPAMDVDGESFVLRPMNCPHHMMIYANRMHSY 289 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 ++LP +I FR E G+ R R F DA+ F TPE + + ++ Sbjct: 290 KDLPIRIGEIAHDFRYESSGTLKGIERGRHFCQNDAHIFV-TPEQIEDEFKRVVDLIFST 348 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G+ + + D E + + T +D+ Sbjct: 349 YKDFGITDYRCVLSLRDPADKVKY-----HDDDEM--------WNKAEDALRTVLNDLGI 395 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y DV + ++ +S ++ F K+ + T+ Sbjct: 396 EYTEEIGEAAFYGPKLDV---NVKPAVGNEYTLSTCQLD----FCLPAKF----NLTYID 444 Query: 305 ADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ + +G++ A I + P +AP ++ ++ +K ++ + Sbjct: 445 KDGEKKTPVVLHRAILGSLDRFMAYIL---EETKGNLPTWLAPVQVRVMPVKTDNEELME 501 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +I + L + V DD GE++G + + P +++G D V + Sbjct: 502 YAHEICSALEEKNVRVELDDRGEKLGYRMREGQIQKVPYLLVIGFNEKEDRTVSYRLHGE 561 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + L+E + N Sbjct: 562 ADTTVLGLDEFVEKIDSEIKNK 583 >gi|51473419|ref|YP_067176.1| threonyl-tRNA synthetase [Rickettsia typhi str. Wilmington] gi|73919822|sp|Q68XE8|SYT_RICTY RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|51459731|gb|AAU03694.1| Threonine translase [Rickettsia typhi str. Wilmington] Length = 635 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 158/443 (35%), Gaps = 40/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y + + RD +L L + ++G+ W G + + IR++ + Sbjct: 230 NYLFMLEEAEKRDHRKIGKELDLF--HFQEEAQGMVFWHDKGWSIYNTIEQYIRKKNRKN 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G IE+ P L LW SG + + +M L + +DK + P + IF+ IKS Sbjct: 288 GYIEVKTPVLVDKSLWEASGHWAKFRCDMFTL-ETDDKILALKPMNCPCHVQIFKQGIKS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + L R+E G+MR R + DA+ F + + + + Sbjct: 347 YRDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETV-RFCKLLTE 405 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G I ++ P + E D + T + + Sbjct: 406 VYKDFGFTDIKVKFSDRPEIRAGNDE-----------------VWDKAEHALKTAVEKVG 448 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + ++ A Y + L D++ + ++ F + + A + Sbjct: 449 FIYTLNPGDGAFYGPKLEF---VLTDAIGRQWQCGTLQMD----FVLPER----LDANYI 497 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 A G+ + +G++ ++ + GK IW V ++ N Sbjct: 498 AASGEKKRPVMLHRAILGSLERFIGILIEEYAGKFPIWLAPVQVAIATITN------DLN 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D ++ L + ++I + P+ ++G K ++ +V I+ Sbjct: 552 DYALEVQKTLIDNNIRTDINISPDKINYKIREFSNQKIPMIAVIGKKEQANKQVTIRKFG 611 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 T +E +S+E++I SN Sbjct: 612 TTGQEILSIEQLIAMIKKENSNY 634 >gi|55981844|ref|YP_145141.1| threonyl-tRNA synthetase [Thermus thermophilus HB8] gi|7388285|sp|P56881|SYT_THET8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|6689424|emb|CAB65483.1| threonyl-tRNA synthetase [Thermus thermophilus] gi|55773257|dbj|BAD71698.1| threonyl-tRNA synthetase [Thermus thermophilus HB8] Length = 659 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 86/451 (19%), Positives = 157/451 (34%), Gaps = 41/451 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQ 61 +Y + + RD +L L +I KG+ WLP G + + A +REEQ Sbjct: 238 LKEYLWQLEEAKKRDHRRLGRELELF--LIDPLVGKGLVLWLPKGNVVREELMAFMREEQ 295 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK----AMIYGPTHEEVMTDI 117 R G ++ P + S +L+ SG Y Y + ++ + P + I Sbjct: 296 VRRGYQLVTTPHIGSLELYKTSGHYPYYAESQFPPISFKERGEEEEYLLKPMNCPHHIRI 355 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 + +SYR LP + +R E G+ R R F DA+ F E + Sbjct: 356 YAYRKRSYRELPLRLAEFGTVYRYEKAGELLGLTRVRGFTQDDAHIFCTPEEVKGE-FLG 414 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + L++F LGLK R I + D + + Sbjct: 415 VLDLVLKVFATLGLKDYRAR--------------IGVRDPKSDKYVGDEAKWALAERQIE 460 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + ++ E A Y D + D+L ++ ++ FG Sbjct: 461 EAAAEAGLRYTVEEGDAAFYGPKLDF---VVKDALGREWQLGTIQVDYNLPERFG----- 512 Query: 297 PMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 T+ G DG++H + G++ ++ G +W V + + Sbjct: 513 ---LTYVGKDGEEHRPVMLHRAPFGSLERFIGILIEHFAGDFPLWLAPVQAVVVPV---- 565 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + D ++ RL + G D E++ ++ A++ P ++VG + ++ Sbjct: 566 --SEKQEDYAREVAGRLKEAGLRAEADTRPERMQARIRDAEVQKVPYILVVGEREKAEGA 623 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 V ++ R G M L + A + R Sbjct: 624 VSVRRRKKGNLGTMPLAAFLEGALREYRERR 654 >gi|27380648|ref|NP_772177.1| threonyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110] gi|27353813|dbj|BAC50802.1| threonyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110] Length = 723 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 75/443 (16%), Positives = 138/443 (31%), Gaps = 39/443 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + G+ W P G + A +R Sbjct: 300 YLKQIEEAEKRDHRKLGRELDLF--HFQEEGPGVVFWHPKGWTIFQQLIAYMRRRLT-GD 356 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-----KAMIYGPTHEEVMTDIFRS 120 E++ P + LW SG + Y + M D + P + IF+ Sbjct: 357 YSEVNAPQILDKVLWETSGHWGWYRENMFAAQSAGDEAEDKRWFALKPMNCPGHVQIFKH 416 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + + R E G+MR R F DA+ F + ++ + Sbjct: 417 GLKSYRDLPLRLAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEDQLAEECLKINDL 476 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + ++ + P + A+ V + I +E Sbjct: 477 ILSTYADFGFTGDLTVKLSTRPDKRVGTDAMWDHAERVMATVLREIQSQNNHIKTE---- 532 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 I A Y + L D++ + + ++ FG Sbjct: 533 --------INPGEGAFYGPKFEY---VLRDAIGRDWQCGTTQVDFNLPERFG-------- 573 Query: 300 ATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + DG K V + G+M ++ + G +W + Sbjct: 574 AFYIDHDGGKKPPVMVHRAICGSMERYIGILIEHYAGNFPLW------LSPVQAVVTTIT 627 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + +++ + + G V D E+I + L P ++VG K V + Sbjct: 628 SEGDEYAKQVLEQARRAGLRVEIDLRNEKINYKVREHSLAKIPALLVVGKKEAETHSVSV 687 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + ++ M+ E I Sbjct: 688 RRLGSDGQKVMTTAEAIAALVEE 710 >gi|302339715|ref|YP_003804921.1| threonyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293] gi|301636900|gb|ADK82327.1| threonyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293] Length = 585 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 79/444 (17%), Positives = 148/444 (33%), Gaps = 39/444 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L L+E RD +L L + + G+ W P G + + ++E + Sbjct: 175 RLYLKHLEEMEKRDHRKLGRELDLFSLH-EEAGPGLVYWHPKGARIRHQIETFWKDEHFK 233 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + LW SG D Y + M + P + I++++ Sbjct: 234 NGYELLYTPHVGKSWLWETSGHLDFYAEGMYPEMVMDKANYYAKPMNCPFHIMIYKTNKH 293 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LPF + ++ +R E G+MR R F DA+ F TPE + ++ L Sbjct: 294 SYRELPFRWAELGTVYRYEKSGTLHGLMRVRGFTQDDAHIFC-TPEQVEDEILEVLRFSL 352 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + G I + P + + S + Sbjct: 353 HMLRAFGFSDIQAYLSTRP-----------------EKAVGDPEQWKLAEASLQKAIEAE 395 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + E A Y D+ K+ D+L + ++S + FG TF Sbjct: 396 GLAYEVDEGGGAFYGPKIDL---KVKDALGRSWQLSTVQFDFNEPKRFG--------MTF 444 Query: 303 KGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 DG + + +G++ V+ + G +W V I + Sbjct: 445 VDHDGKEKQPYMVHRALLGSIERFFGVLIEHYGGAFPVWLSPVQVQVIPVAP------AF 498 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + L + D ++ ++ A P +I+G K V ++ R Sbjct: 499 EAYAKSVETELRRHDLRADVDLSDSRMNAKIRNAQKEKIPYMLILGEKEQESRSVSVRKR 558 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 ++L+E I ++ Sbjct: 559 NGEQVNGLALDEFIAQTLKIIASK 582 >gi|307822387|ref|ZP_07652619.1| prolyl-tRNA synthetase [Methylobacter tundripaludum SV96] gi|307736953|gb|EFO07798.1| prolyl-tRNA synthetase [Methylobacter tundripaludum SV96] Length = 569 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 121/237 (51%), Positives = 165/237 (69%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +++ L ++E P DAEIASH+LM+R G+I + + G+Y+WLPLG + + V I REE Sbjct: 1 MRTTQFPLNTVKETPADAEIASHQLMIRAGLIRKLAAGLYTWLPLGLRVMRKVEKITREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +TGA+E+ +P LQ A+LW E+GR++ YG E+ RL DR+D+ GPTHEE++TD+ R+ Sbjct: 61 MEKTGALEVLMPGLQPAELWQETGRWEQYGPELARLKDRHDRDFCLGPTHEEIITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T+YQIQ KFRDE+RPRFGVMRSREF+MKDAYSF L E + +Y M + Sbjct: 121 EIKSYKQLPITYYQIQSKFRDEIRPRFGVMRSREFIMKDAYSFHLDHESLQVTYEAMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF+ LGL + A+SG IGG +SHEF VLAD+GE + ++ E Sbjct: 181 YTNIFNHLGLNFRAVIADSGSIGGAVSHEFHVLADSGEDAIAF-STDSEYAANVEKA 236 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 70/186 (37%), Positives = 102/186 (54%), Gaps = 3/186 (1%) Query: 260 SDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ D P+ K RGIEVGHIF GTKYS M A GK+ + MG Y Sbjct: 383 ADLRMVVEGDPSPDGKGQITLARGIEVGHIFQLGTKYSEAMKAGVINEGGKNQIMTMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKVG 376 GIG RVVAA IE +HD KGIIWP ++APF+++L + + ++A EK+Y L G Sbjct: 443 GIGISRVVAAAIEQNHDDKGIIWPTNLAPFQVALCPMNMHKSERLKEASEKLYQDLLAAG 502 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV +DD + G F+ +L+G P ++VG + + VE K R E++ ++I+ Sbjct: 503 IDVLFDDRKVRAGFMFSDMELIGIPHCIVVGDRGLDSGTVEYKARTAEANEEIPFADIID 562 Query: 437 YASHRF 442 + + Sbjct: 563 FLKAKL 568 >gi|331000280|ref|ZP_08323964.1| proline--tRNA ligase [Parasutterella excrementihominis YIT 11859] gi|329572446|gb|EGG54099.1| proline--tRNA ligase [Parasutterella excrementihominis YIT 11859] Length = 582 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 129/275 (46%), Positives = 174/275 (63%), Gaps = 5/275 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++F+ +E P DAEI S KLMLR GMI + + G+Y+++P+G ++L + I+REE Sbjct: 1 MRAKQFFISTQKEAPADAEIVSQKLMLRAGMIRKLAAGVYNYMPMGLRSLKKIERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GAIE+ +P +Q A+LW E+GR+ YG E+LR DR+D+ + PT EEV+TDI R Sbjct: 61 MDRAGAIELLMPIVQPAELWQETGRWQKYGSELLRFKDRHDRDFVLQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKS+R LP FYQIQ KFRDE RPRFGVMR R+F+MKDAYSFD T E + SY+KMF + Sbjct: 121 EIKSWRQLPVNFYQIQTKFRDERRPRFGVMRGRDFVMKDAYSFDRTAEDAGKSYDKMFEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y RIF RLGL +RA+SG IGG S EF V+ADTGE + D ++ E + Sbjct: 181 YCRIFDRLGLVYRAVRADSGSIGGSRSQEFQVIADTGEDLIVFCPD-SEYAANIELAEAP 239 Query: 240 ---DDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + +E+ P ++ E L L Sbjct: 240 CLIEKRAEATETMEKVPTPGRDKCELVVELLNKPL 274 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 71/189 (37%), Positives = 106/189 (56%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ K RGIEVGH+F+ G KYS PM+AT+ +GK +QMG Sbjct: 392 VVADIRNVVEGDVSPDGKGTLKMQRGIEVGHVFFLGDKYSAPMNATYLDENGKPQLLQMG 451 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSK 374 YGIG R++ A IE HD KGIIWPDS+APF + + + + + A ++Y RL + Sbjct: 452 CYGIGISRLLGAAIEQGHDDKGIIWPDSIAPFTVVICPVGYDKSEEVQKASNELYGRLRE 511 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV DD G + G FA +L+G P +V +G + + + +VE HR E++ + E+ Sbjct: 512 AGIDVILDDRGLRPGVMFADWELIGVPHRVTIGDRGLKNGEVEYAHRGDLQNENVPVTEI 571 Query: 435 INYASHRFS 443 + + Sbjct: 572 ADKLIAKIK 580 >gi|146339967|ref|YP_001205015.1| threonyl-tRNA synthetase [Bradyrhizobium sp. ORS278] gi|146192773|emb|CAL76778.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS) [Bradyrhizobium sp. ORS278] Length = 688 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 76/443 (17%), Positives = 138/443 (31%), Gaps = 39/443 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + G+ W P G + A +R Sbjct: 264 YLKQIEEAEKRDHRKLGRELDLF--HFQEEGPGVVFWHPKGWSIFQALIAYMRRRL-AGD 320 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-----KAMIYGPTHEEVMTDIFRS 120 E++ P + LW SG ++ Y + M D + P + IF+ Sbjct: 321 YDEVNAPQILDKSLWETSGHWNWYRENMFAAQSAGDEAEDKRWFALKPMNCPGHVQIFKH 380 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + + R E G+MR R F DA+ F + ++ + Sbjct: 381 GLKSYRDLPMRLAEFGVVHRYEASGAMHGLMRVRGFTQDDAHVFCTEDQLAEECLKINDL 440 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + ++ + P + E A+ V + I +E Sbjct: 441 ILSTYSDFGFEGELTVKLSTRPEKRVGTDEMWDHAERVMATVLNEIKAQNNHIRTE---- 496 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 I A Y + L D++ + + ++ FG Sbjct: 497 --------INPGEGAFYGPKFEY---VLRDAIGRDWQCGTTQVDFNLPERFG-------- 537 Query: 300 ATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + ADG V + G+M ++ + G +W ++ Sbjct: 538 AFYIDADGAKKAPVMVHRAICGSMERFIGILIEHYAGSFPLWLAPTQVVVTTIT------ 591 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + +++ A L + G D E+I + L P ++VG K V + Sbjct: 592 SEGDEYAKQVLAALRRAGLRAEIDLRNEKINYKVREHSLQKIPALLVVGKKEAETHSVSV 651 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + M + I Sbjct: 652 RRLGRDGQTVMPTADAIAALVDE 674 >gi|257125504|ref|YP_003163618.1| prolyl-tRNA synthetase [Leptotrichia buccalis C-1013-b] gi|257049443|gb|ACV38627.1| prolyl-tRNA synthetase [Leptotrichia buccalis C-1013-b] Length = 570 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 131/296 (44%), Positives = 178/296 (60%), Gaps = 7/296 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK FL +E P++A+I SH+LMLR MI+Q ++G+Y++LP G + L + I REE Sbjct: 1 MRLSKAFLKTYKEAPKEAQIVSHQLMLRAFMINQLTRGVYTYLPFGYRVLKKIENITREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P LQ A LW ESGR+ +YG E++RL DRN++ GPTHEEV+TD+ R Sbjct: 61 MDRAGAQELLMPVLQPASLWEESGRWFAYGPELMRLKDRNEREFSLGPTHEEVITDVVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LPF YQIQ KFRDE+RPRFG+MR REF+MKD YSF LT E Y M + Sbjct: 121 SISSYKELPFNVYQIQTKFRDEMRPRFGLMRGREFVMKDGYSFHLTQESLDEEYLNMKDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--D 238 Y RIF R+GL + A++G IGGD SHEF+VLA++GE + S D+ E Sbjct: 181 YSRIFERMGLNYRAVEADTGSIGGDASHEFMVLAESGEDDILYSDS-SDYAANVEKATSI 239 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARG----IEVGHIFYF 290 + S + + + + F ++P+ K V A +E G F Sbjct: 240 IELKESNEEKLPKELVETPNAKTIEDLANFLNIPKEKTVKAVMLKEILEDGEKFVL 295 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 77/208 (37%), Positives = 118/208 (56%), Gaps = 3/208 (1%) Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSL 296 + + V Y +D+ K D P+ K V ARGIEVGHIF G KYS Sbjct: 364 ANKVDYHYVNVNLEDLAYDLVADIRTAKAGDLSPDGKGVLKIARGIEVGHIFKLGEKYSK 423 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 ++AT +GK +++MG YG+G R+++A IE +HD GIIWP ++AP+ + +I Sbjct: 424 ALNATVLDENGKQQFIKMGCYGMGMSRIISAAIEQNHDEYGIIWPKAIAPYHVDVIIANM 483 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D+ + EK+Y L++ + DD E+ G +F ADL+GFPL+++VG K +D V Sbjct: 484 KDETQVNIGEKLYNELNQNKIETVLDDRNERAGFKFKDADLIGFPLKIVVG-KGAADGIV 542 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSN 444 E+K R TG D+ +EEV+N+ + + Sbjct: 543 EVKDRKTGESTDVKVEEVLNFVKNFMAE 570 >gi|255065704|ref|ZP_05317559.1| proline--tRNA ligase [Neisseria sicca ATCC 29256] gi|255050022|gb|EET45486.1| proline--tRNA ligase [Neisseria sicca ATCC 29256] Length = 570 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 123/273 (45%), Positives = 174/273 (63%), Gaps = 5/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL+ P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIELAPTL 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + + + A N K DSL + Sbjct: 240 PLKGERAAAQAELA----KVHTPNVKTIDSLVD 268 Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 109/230 (47%), Gaps = 7/230 (3%) Query: 222 FCSKDFMDFPIPSENTDFDDIISLNSIVEQW----TAPYAATSDVHNEKLFDSLPEN--K 275 F K + DF + + A D+ N D P+ + Sbjct: 341 FTGKVYADFATEKGVDWVIGANEDDYHYTGFNFGRDAAEPEFVDLRNVVEGDESPDGQGR 400 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D Sbjct: 401 LKLARGIEVGHVFQLRDKYTKAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDE 460 Query: 336 KGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KGIIW ++APF++ ++ + RDA +KIYA L G DV DD E+ G Sbjct: 461 KGIIWTKAMAPFEVVIVPMNYKKSDAVRDAADKIYAELLAAGADVLLDDRDERAGVLLND 520 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 ++LLG P ++++G + + + VE R + +SL E+ + Sbjct: 521 SELLGIPHRIVIGDRALKEGNVEYAERRDNQAQTVSLNEIAGKVLAALKD 570 >gi|228940907|ref|ZP_04103466.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228973836|ref|ZP_04134412.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980425|ref|ZP_04140735.1| Prolyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228779245|gb|EEM27502.1| Prolyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228785861|gb|EEM33864.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228818743|gb|EEM64809.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326941586|gb|AEA17482.1| prolyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis CT-43] Length = 566 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 123/267 (46%), Positives = 168/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 D + + E+ A E++ Sbjct: 240 DTYTKSDEAEKALEKVATPDQKAIEEV 266 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQIYITNILK 566 >gi|194364305|ref|YP_002026915.1| prolyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3] gi|226701341|sp|B4SJ64|SYP_STRM5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|194347109|gb|ACF50232.1| prolyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3] Length = 567 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 115/223 (51%), Positives = 150/223 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V I+REE Sbjct: 1 MRLSQFHLHTTKETPSDAELTSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E +PT+Q +LW ++GR+ +G ++L++ DR D+ Y PT EE D RS Sbjct: 61 MDRAGAVEFQIPTIQPKELWEQTGRWQKFGPQLLKIKDRKDQTFCYSPTAEEAACDFARS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF L E Y M + Sbjct: 121 ELSSYKQLPVNFYQIQTKFRDEIRPRFGVMRSREFLMKDAYSFHLHDECLVREYENMKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC 223 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE + Sbjct: 181 YSRIFTRLGLDFRMVQADSGAIGGDASQEFHVIADSGEDALVF 223 Score = 147 bits (372), Expect = 3e-33, Method: Composition-based stats. Identities = 63/184 (34%), Positives = 94/184 (51%), Gaps = 2/184 (1%) Query: 258 ATSDVHNEKLFD-SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N + D +L + ARGIEVGH+F G Y+ + AT +GK + MG Sbjct: 383 EVADIRNVRAGDRALDGGELKIARGIEVGHVFQLGRTYARALDATVLDENGKAAVMAMGC 442 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKV 375 YGIG RVVAA IE +HD GIIWPD++AP+++ + I D DA + L Sbjct: 443 YGIGISRVVAAAIEQNHDDAGIIWPDAMAPWQVVVCVINPKGDAAVADAATNLLQELRDA 502 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G D DD G + G+ FA +L+G P +V+V + ++ E + R E + ++ Sbjct: 503 GLDAALDDRGLRPGAMFADMELIGIPHRVVVSERGLAAGTYEYRSRRASEAESLDKATLL 562 Query: 436 NYAS 439 Sbjct: 563 QRLQ 566 >gi|189424968|ref|YP_001952145.1| prolyl-tRNA synthetase [Geobacter lovleyi SZ] gi|226701293|sp|B3E1X5|SYP_GEOLS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|189421227|gb|ACD95625.1| prolyl-tRNA synthetase [Geobacter lovleyi SZ] Length = 576 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 127/286 (44%), Positives = 179/286 (62%), Gaps = 2/286 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +++F+P L+E P DAE+ SH+LM+R+GMI + + GIY+++PLG +++ I+REE Sbjct: 1 MRYTQFFIPTLKETPSDAEVVSHQLMMRSGMIRKIAAGIYTYMPLGLRSIRKFEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW+ES R+ YGKE+LR DR D GPTHEE++TDI R Sbjct: 61 MNRAGAIELLMPGVQPAELWIESKRWAQYGKELLRFKDRKDNEFCMGPTHEEIITDIARR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR +P FYQIQ KFRDE+RPRFG+MR REF+MKDAYSFD+ + SY+KM+ + Sbjct: 121 EVKSYRQMPVNFYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFDVDSSAADLSYDKMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GL + A++G IGG SHEF+VLA +GE + + E + Sbjct: 181 YNRIFERCGLNFRAVEADTGSIGGSASHEFMVLASSGEDAIVSCNACR-YAANVEKAEGV 239 Query: 241 DIISLNSIVEQWTAPYAA-TSDVHNEKLFDSLPENKRVSARGIEVG 285 + + T + + F LP++ V A + G Sbjct: 240 RQQQGGAGQQALTKVHTPDKKTIAEVAEFLGLPQSGTVKALVLSNG 285 Score = 173 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 73/190 (38%), Positives = 104/190 (54%), Gaps = 4/190 (2%) Query: 260 SDVHNEKLFDSLPENK---RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ D P RGIEVGH+F GTKYS M+AT+ DGK+ + MG Sbjct: 382 ADIRLIGAGDPCPRCSGGTLEVWRGIEVGHVFKLGTKYSSSMNATYLDKDGKEQIIFMGC 441 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKV 375 YGIG R VAA IE +HD G+IWP +APF S++ I A D+ A + I+ RL Sbjct: 442 YGIGIGRTVAASIEQNHDENGVIWPLPLAPFHCSVVAINAQKDEAVMAAAQDIHDRLEAA 501 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G +F DL+G PL+++VG K +++ VE K R G + ++ E+ I Sbjct: 502 GVEVLLDDRDERPGVKFKDHDLIGIPLRIVVGGKNLAEGNVEFKQRAGGEMQLLAPEQAI 561 Query: 436 NYASHRFSNN 445 + + Sbjct: 562 ESVIAKVRES 571 >gi|225627544|ref|ZP_03785581.1| threonyl-tRNA synthetase [Brucella ceti str. Cudo] gi|225617549|gb|EEH14594.1| threonyl-tRNA synthetase [Brucella ceti str. Cudo] Length = 693 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 152/445 (34%), Gaps = 40/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD ++ L + G+ W G K N+ + +R + Sbjct: 268 QAYLHMLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 325 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 326 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 385 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F + + Sbjct: 386 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRIN 445 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G + I ++ + P S E A++ V E Sbjct: 446 -DLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVL------------EQI 492 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I+ A Y + L D++ + ++ FG Sbjct: 493 RQQSNNIKTGILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------ 543 Query: 298 MSATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G K V + G+M ++ + G +W V ++ Sbjct: 544 --AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATIT---- 597 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + ++ A+L G V D E+I + L P+ ++ G + + V Sbjct: 598 --SDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHSLQKVPVILVCGKREAEEKTV 655 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + +E M+L+E I Sbjct: 656 NMRRLGSRDQESMTLDEAIARLCEE 680 >gi|257067150|ref|YP_003153406.1| threonyl-tRNA synthetase [Anaerococcus prevotii DSM 20548] gi|256799030|gb|ACV29685.1| threonyl-tRNA synthetase [Anaerococcus prevotii DSM 20548] Length = 640 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 147/442 (33%), Gaps = 42/442 (9%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + + +E RD ++ L T H+ G + P G ++ + + N G Sbjct: 232 YEELQKEIEKRDHRKIGREMNLFT--FHEEGPGFPFFHPNGMILMNELLGWWTDVLNENG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + DLW SG +D Y + M + +A P + + S+ SY Sbjct: 290 YGEIKTPLILNEDLWHRSGHWDHYKENM-YFTKIDGEAYAIKPMNCPGSVLTYASNQHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R EL G+ R R F DA+ + L + + Y + Sbjct: 349 RDLPIRLAEYGQVHRHELSGTLHGLFRVRTFTQDDAHVYCLPSQIKEEVYRM-IDLADLL 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K + P DF ++ Sbjct: 408 YSTFGFKYTI-ELSTRP-----------------DDFMGDIKDWDFAEDQLKKALEERGI 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I A Y D H L D+ + ++ F + T+ Sbjct: 450 EYEINPGDGAFYGPKIDFH---LLDAAKREWQCGTIQLD----FQLPQNFD----LTYID 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G+ + +G++ V+ G+ +W + I D Sbjct: 499 ENGEKQRPVMLHRALLGSIERFIGVLTEHFAGRFPLW------LNPQQVEIIPVSDKFID 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 CE + ++ + G V D E +G + A L+ ++VG K + K+ +++R Sbjct: 553 YCEDLKEKIKEAGFRVNIDYRSEGVGYKIRQAQLMRTNYMLVVGEKEETSGKLTVRNRDG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 D+S++E I S + Sbjct: 613 EETADVSVDEFIEKISKERDSR 634 >gi|189466356|ref|ZP_03015141.1| hypothetical protein BACINT_02731 [Bacteroides intestinalis DSM 17393] gi|189434620|gb|EDV03605.1| hypothetical protein BACINT_02731 [Bacteroides intestinalis DSM 17393] Length = 646 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 74/446 (16%), Positives = 145/446 (32%), Gaps = 40/446 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L KG+ WLP G + +R Q R Sbjct: 230 EYLVVLEEAKKRDHRKIGREMDLFM-FSDTVGKGLPMWLPKGTALRLRLQEFLRRIQARY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + L++ SG Y YGK+ + + P + I+++ Sbjct: 289 DYQEVITPPIGNKLLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F + + ++ Sbjct: 349 RSYKDLPLRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDE-FLRVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + ++ + D + + D + + Sbjct: 408 SIVFRSMEFANVEAQISLR--------------DKVNREKYIGSDENWERAEQAIIEACE 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + +E A Y D + D++ ++ ++ Sbjct: 454 EKGLTARIEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFDL 502 Query: 301 TFKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + GAD + H M R VA +IE + + Sbjct: 503 EYTGADNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLWLTPEQVAILPI-------S 555 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + D +++ L + D+ E+IG + +L P +IVG K + +V + Sbjct: 556 EKFNDYAQEVKKFLKQYDIRAIVDERNEKIGRKIRDNELKRIPYMLIVGEKEAENREVSV 615 Query: 419 KHRLTGIREDMSLEEVINYASHRFSN 444 + + G + M EE + N Sbjct: 616 RKQGEGDKGTMKFEEFAKILNEEVQN 641 >gi|330466868|ref|YP_004404611.1| threonyl-tRNA synthetase [Verrucosispora maris AB-18-032] gi|328809839|gb|AEB44011.1| threonyl-tRNA synthetase [Verrucosispora maris AB-18-032] Length = 666 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 73/443 (16%), Positives = 143/443 (32%), Gaps = 36/443 (8%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E R D L L + + G+ + P G + R + + Sbjct: 250 KAYLKLLEEAARRDHRKLGVDLDLFS-FPDELGSGLAVFHPKGGIIRREMENYSRLKHEQ 308 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G ++ P + L+ SG D Y M + + P + + IFRS + Sbjct: 309 AGYEFVNTPHITKGHLYEVSGHLDWYADGMFPPMEVEGASYYLKPMNCPMHDLIFRSRGR 368 Query: 124 SYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ +R E G+ R R DA+ F + + + L Sbjct: 369 SYRELPLRMFEFGTVYRYEKSGVVHGLTRVRGMTQDDAHIFCTEEQMAGEL-KSLLAFVL 427 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + GL + + + + + + + ++ Sbjct: 428 ELLRDYGLDDFYLELSTRNPEKS----------------VGTDENWERATEALRSAAEES 471 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + ++ D++ ++S ++ F +++L A Sbjct: 472 GLTLVPDPGGAAFYGPKI---SVQVKDAIGRTWQMSTIQVD----FNLPERFNLEYQAA- 523 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + V + G++ V+ + +P +AP ++ I I+ Sbjct: 524 --DGTRQRPVMIHRALFGSIERFFGVLT---EHYAGAFPAWLAPVQVVGIPIRDDHA--- 575 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D A L G D E++ + A P VI G V+ V ++R Sbjct: 576 DYLHGFVAALRAEGIRAQVDSGDERMQKKIRNAQQQKIPFMVIAGDDDVAAGTVSFRYRD 635 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 R + L E + + + Sbjct: 636 GSQRNGVPLAEAVTHVLDVVNTR 658 >gi|119358269|ref|YP_912913.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266] gi|119355618|gb|ABL66489.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266] Length = 675 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 66/444 (14%), Positives = 153/444 (34%), Gaps = 39/444 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + + RD +L L + + G+ WLP G + + ++EEQ + G + Sbjct: 260 RVEEAKRRDHRKLGAELELFM-LSPEIGSGLPVWLPKGAIIRNELETFLKEEQRKRGYLP 318 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK-----AMIYGPTHEEVMTDIFRSHIK 123 + P + + +L+ SG Y Y +D+ + P + I+ ++ Sbjct: 319 VYTPHIGNIELYKRSGHYPYYSDSQFPPLTYHDENGKQEQYLLKPMNCPHHHLIYNVKLR 378 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + +R E G++R+R F D++ + + Sbjct: 379 SYRDLPIRLAEFGTVYRHEQSGELNGLVRARGFTQDDSHIYCRPDQLVDE-ICNAIDLTQ 437 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +F LG + R + D + + + + T+ + Sbjct: 438 HVFATLGFSDVQTRLS--------------MHDPLNQEKYGGTPEVWEQAEKDVTEAANR 483 Query: 243 ISLNSIV-EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + +N ++ + Y D + D++ ++ ++ + Sbjct: 484 MGINYVIGIGEASFYGPKIDFI---VRDAIGRKWQLGTVQVDYVMP--------ERFDLS 532 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + G+D + H + I + +P +AP + ++ + + Sbjct: 533 YIGSDSQKHRPIVIHRAPFGSMER--FIGVLIEHTAGNFPLWLAPVQAIIMPLG---EEI 587 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + I+ +L G D E+IG + A++ P +I+G K + ++ ++ Sbjct: 588 HAYAKSIHEKLLHSGIRAELDLRNEKIGKKIREAEIGKLPYMIIIGQKELESGQLSLRRH 647 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 TG + + +I+ + Sbjct: 648 RTGDEGLFTTDSLIDKLKKEIAAK 671 >gi|311894878|dbj|BAJ27286.1| putative threonyl-tRNA synthetase [Kitasatospora setae KM-6054] Length = 659 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 70/442 (15%), Positives = 136/442 (30%), Gaps = 38/442 (8%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD ++L L + + Q G+ + P G + R+ G + Sbjct: 253 LEEAAKRDHRKLGNELDLFS-IPEQIGSGLAVFHPKGGIIRRTMEDYSRKRHEEEGYEFV 311 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 P L+ SG D Y M P + + IF + +SYR L Sbjct: 312 YTPHATKGKLFETSGHLDWYADGMYPPMQLDEGVDYYLKPMNCPMHNLIFDARGRSYREL 371 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P ++ +R E G+ R+R F DA+ + + + ++ L + Sbjct: 372 PLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQMADEL-DRTLTFVLDLLRD 430 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 GL + + + S D + + + Sbjct: 431 YGLNDFYLELST----------------KDPEKFVGSDDAWEEATAVLASVAEKQGLPLV 474 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 A Y + + D++ ++S ++ F ++ + ADG Sbjct: 475 PDPGGAAFYGPKI---SVQARDAIGRTWQMSTIQLD----FNLPERFD----LEYTSADG 523 Query: 308 KDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + G++ AV+ + P +AP ++ I I Sbjct: 524 SRQRPVMIHRALFGSIERFFAVLL---EHYAGAMPPWLAPVTVTGIPIT---DEHVPYLL 577 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + A L K G V D +++ + A P +I G+ V V ++R + Sbjct: 578 DVAAELKKHGIRVEVDTSDDRMQKKIRNAQKTKVPFMLIAGNDDVEAGAVSFRYRSGEQK 637 Query: 427 EDMSLEEVINYASHRFSNNRPV 448 + +E I + V Sbjct: 638 NGVPKDEAIAEIVEAVRSRVQV 659 >gi|297581262|ref|ZP_06943186.1| prolyl-tRNA synthetase [Vibrio cholerae RC385] gi|297534578|gb|EFH73415.1| prolyl-tRNA synthetase [Vibrio cholerae RC385] Length = 571 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 115/237 (48%), Positives = 154/237 (64%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M V+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYEAMHVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL P+ A++G IGG+ SHEF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 67/190 (35%), Positives = 111/190 (58%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N D + + RGIEVGHIF GT YS M+ ++GK+ ++M Sbjct: 382 GKVEDLRNVVEGDPSPCGKGTLMLKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVAA IE +HD GIIWPD++APF+++++ + + + A EK+YA L+ Sbjct: 442 GCYGIGVSRVVAAAIEQNHDDYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G +V +DD E+ G F+ +L+G P +I+G + + + E K+R +G +E +++ Sbjct: 502 AAGIEVLFDDRKERPGVMFSDMELIGVPHTIIIGDRSMDEGHFEYKNRRSGEKEAVAMAS 561 Query: 434 VINYASHRFS 443 +I++ + + Sbjct: 562 IIDFIQTKLA 571 >gi|119717421|ref|YP_924386.1| prolyl-tRNA synthetase [Nocardioides sp. JS614] gi|152112937|sp|A1SLL4|SYP_NOCSJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|119538082|gb|ABL82699.1| prolyl-tRNA synthetase [Nocardioides sp. JS614] Length = 589 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 106/280 (37%), Positives = 150/280 (53%), Gaps = 5/280 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S F+ L+E+P DAE+ SH+L++R G I + + GIY+WLPLG + L + +IREE Sbjct: 3 MRMSSLFVRTLREDPADAEVPSHRLLVRAGYIRRAAPGIYTWLPLGLRVLRKIENVIREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA EM P L + + + R+ YG + RL DR + GPTHEE+ T + + Sbjct: 63 MDAIGAQEMLFPALLPREPYEATNRWTEYGDGIFRLQDRKGADYLLGPTHEEMFTLVVKD 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP + YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G SY K + Sbjct: 123 LYSSYKDLPLSIYQIQTKYRDEARPRAGLLRGREFVMKDSYSFDVDDAGLDVSYQKHRDA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+RIF RLG + + + A SG +GG S EF+ A GE + D+ E Sbjct: 183 YVRIFDRLGFEYVIVEAMSGAMGGSKSEEFLAKASVGE-DTYVRCTLCDYAANVEAVHSP 241 Query: 241 DIISLNSI----VEQWTAPYAATSDVHNEKLFDSLPENKR 276 I + P T + L + P R Sbjct: 242 PIPPVPYDDAPAAHAEQTPDTPTIETLVAHLNERFPREDR 281 Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats. Identities = 65/188 (34%), Positives = 95/188 (50%), Gaps = 6/188 (3%) Query: 260 SDVHNEKLFDSLPENK---RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +V + D P +ARGIE+GHIF G KY+ + GK V MGS Sbjct: 403 IEVAEVRDGDPCPRGDGGTLETARGIEMGHIFQLGRKYADALDLKVLDEQGKLVTVTMGS 462 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R VAA+ E +HD G+ WP VAP + ++ D+ A E+I L K G Sbjct: 463 YGIGPSRAVAAIAEGTHDELGLAWPREVAPADVHIVATG-KDEHVFAAAERIAHELDKQG 521 Query: 377 CDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +V +DD G +F A+L+G P V+VG K ++ +E+K R TG R+D+ + ++ Sbjct: 522 VEVLYDDRPKVSPGVKFKDAELIGVPTIVVVG-KGLAAGTIEVKDRRTGQRQDVPADHLV 580 Query: 436 NYASHRFS 443 + Sbjct: 581 DRVIAIVR 588 >gi|229525492|ref|ZP_04414897.1| prolyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426] gi|229339073|gb|EEO04090.1| prolyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426] gi|327483617|gb|AEA78024.1| Prolyl-tRNA synthetase Bacterial type [Vibrio cholerae LMA3894-4] Length = 571 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 115/237 (48%), Positives = 154/237 (64%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M V+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYEAMHVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL P+ A++G IGG+ SHEF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 67/190 (35%), Positives = 111/190 (58%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N D + + RGIEVGHIF GT YS M+ ++GK+ ++M Sbjct: 382 GKVEDLRNVVEGDPSPCGKGTLMLKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVAA IE +HD GIIWPD++APF+++++ + + + A EK+YA L+ Sbjct: 442 GCYGIGVSRVVAAAIEQNHDDYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G +V +DD E+ G F+ +L+G P +I+G + + + E K+R +G +E +++ Sbjct: 502 AAGIEVLFDDRKERPGVMFSDMELIGVPHTIIIGDRSMDEGHFEYKNRRSGEKEAVAMAS 561 Query: 434 VINYASHRFS 443 +I++ + + Sbjct: 562 IIDFIQAKLA 571 >gi|229152018|ref|ZP_04280213.1| Prolyl-tRNA synthetase [Bacillus cereus m1550] gi|228631367|gb|EEK88001.1| Prolyl-tRNA synthetase [Bacillus cereus m1550] Length = 566 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 122/267 (45%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKALKKVATPDQKAIEEV 266 Score = 166 bits (419), Expect = 8e-39, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 108/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++++EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVNVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|311747151|ref|ZP_07720936.1| threonine--tRNA ligase [Algoriphagus sp. PR1] gi|126578860|gb|EAZ83024.1| threonine--tRNA ligase [Algoriphagus sp. PR1] Length = 649 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 88/448 (19%), Positives = 160/448 (35%), Gaps = 38/448 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y I + RD +L L T + G+ WLP G + + +++ Q+ Sbjct: 231 LKEYLEMIEEAKKRDHRKLGRELELFT-FSEKVGMGLPLWLPKGTLLRERLVNFLKKAQD 289 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRS 120 + G ++ P + L+ SG Y+ YGK+ + + + P + +I++ Sbjct: 290 KAGYQQVITPHIGHKVLYETSGHYEKYGKDSFQPITTPHEGEEFLLKPMNCPHHCEIYKH 349 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 SY+ LP + + +R E G+ R R F DA+ F P+ K + K+ Sbjct: 350 KPHSYKELPIRYAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCR-PDQVKEEFIKVID 408 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L +F LG + D + + D S + Sbjct: 409 LVLYVFKALGFDDFTAQISLR--------------DPENPEKYIGGDEAWDKAESAIIEA 454 Query: 240 DDIISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 L+++ E A Y D + D+L ++ ++ Sbjct: 455 AAEKGLDTVTELGEAAFYGPKLDFM---VKDALGRKWQLGTIQVDYQLP--------ERF 503 Query: 299 SATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + G+D + H + G++ AV+ G +W INI Sbjct: 504 QLEYIGSDNQKHRPVMIHRAPFGSLERFVAVLIEHCAGNFPLW------LSPEQINILPI 557 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + D E+I L + G D+ E+IG + +++ P +IVG K + K+ Sbjct: 558 SEKFVDYAEEIKGILDEAGISGSIDNRDEKIGRKIRDSEVKKVPFMLIVGEKEKEERKLS 617 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ G + S EE INY S + Sbjct: 618 VRKHGQGDLGNFSPEEFINYFEGIISES 645 >gi|15677205|ref|NP_274358.1| prolyl-tRNA synthetase [Neisseria meningitidis MC58] gi|81857571|sp|Q9JZ14|SYP_NEIMB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|7226583|gb|AAF41714.1| prolyl-tRNA synthetase [Neisseria meningitidis MC58] gi|325134423|gb|EGC57068.1| prolyl-tRNA synthetase [Neisseria meningitidis M13399] gi|325200038|gb|ADY95493.1| prolyl-tRNA synthetase [Neisseria meningitidis H44/76] Length = 570 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 122/273 (44%), Positives = 171/273 (62%), Gaps = 5/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYQDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIELAPTL 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + + + N K DSL + Sbjct: 240 PLKGERAAAQAELV----KVHTPNVKTIDSLVD 268 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 69/229 (30%), Positives = 111/229 (48%), Gaps = 7/229 (3%) Query: 222 FCSKDFMDFPIPSENTDFDDIISLNSIVEQW----TAPYAATSDVHNEKLFDSLPEN--K 275 F K + DF + + A D+ N D P+ + Sbjct: 341 FAGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEFVDLRNVVEGDESPDGQGR 400 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D Sbjct: 401 LKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDE 460 Query: 336 KGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KGIIW ++APF++ ++ + R+A +KIYA L G DV DD E+ G Sbjct: 461 KGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERAGVLLND 520 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 ++LLG P ++++G + + + VE R + +++ E++ + + Sbjct: 521 SELLGIPHRIVIGDRALKEGNVEYAERRDNEAQAVAIGEIVARVTASLN 569 >gi|260911583|ref|ZP_05918168.1| threonine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295] gi|260634289|gb|EEX52394.1| threonine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295] Length = 654 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 152/445 (34%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L + KG+ WLP G + + ++R+ Q R Sbjct: 232 EYLVMLEEAKKRDHRKIGKEMELFM-FSERVGKGLPIWLPKGTELRLRLQDMLRKIQKRF 290 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P + S +L+V SG Y YGK+ + D+ + P + ++F Sbjct: 291 GYQEVITPHIGSKNLYVTSGHYAHYGKDSFQPIHTPEEDEEYMLKPMNCPHHCEVFAWKP 350 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + +R E G+ R R F DA+ F + M Sbjct: 351 RSYKDLPLRIAEFGTVYRYEKSGELHGLTRVRSFTQDDAHIFCRPEQVKNEFLRVM---- 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++A D I L D T + D + D Sbjct: 407 -----------DIIQAVFKIFQFDNFEAQISLRDPNNTTKYIGSDEVWEESEQAIIDACK 455 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L++ + A Y D + D++ ++ ++ Sbjct: 456 EKGLDAKIAYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFKL 504 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D + G+M +AV+ G +W + I + Sbjct: 505 EYTAEDNTKKTPVMVHRAPFGSMERFSAVLIEHTTGHFPLW------LIPDQVAILPISE 558 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D +++ L VG D E+IG + ++ P VIVG K + V ++ Sbjct: 559 KFNDYAQRVAKYLDSVGVRATLDVRNEKIGRKIRDNEIKRVPYMVIVGEKEAEEGLVSMR 618 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M++EE + + Sbjct: 619 KQGGGEQATMTMEEFAKRINDEVAT 643 >gi|222099131|ref|YP_002533699.1| Prolyl-tRNA synthetase [Thermotoga neapolitana DSM 4359] gi|254782923|sp|B9KBD7|SYP_THENN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|221571521|gb|ACM22333.1| Prolyl-tRNA synthetase [Thermotoga neapolitana DSM 4359] Length = 577 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 108/227 (47%), Positives = 154/227 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + + P L+E P D E SH+ +LR G I + + GIY++LPLG++ L + I+REE Sbjct: 1 MRMKQLYAPTLKETPSDVETVSHEYLLRGGFIRKVAAGIYTYLPLGRRVLLKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P LQ A+LW SGR+D YG EM++L DR+++ GPTHEE++TD+ ++ Sbjct: 61 MNRIGAQEILMPILQPAELWKRSGRWDDYGPEMMKLKDRHERDFTLGPTHEEIVTDLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQ+ K+RDE+RPRFG++R+REF+MKDAYSF + E +Y + Sbjct: 121 ELRSYRQLPLVVYQVANKYRDEIRPRFGLLRAREFIMKDAYSFHSSWESLDETYELFKEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 Y RI RLG+K + + AE+G IGG+ SHEF+V A GET V + Sbjct: 181 YSRIMERLGVKYMVIEAETGAIGGNASHEFVVPAKIGETNVLYCEKC 227 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 98/197 (49%), Gaps = 10/197 (5%) Query: 258 ATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 D+ D P + +GIE+GHIF GTKYS M A F +G+ MG Sbjct: 378 EWCDLRTVVEGDPCPVCGEPLRATKGIELGHIFKLGTKYSEAMEAYFMDENGEMKPFIMG 437 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YG G R +AAV+E HD G+IWP S+AP+ + + + +D + E+IY L + Sbjct: 438 CYGWGVSRTMAAVVEHFHDENGMIWPLSIAPYTVIVDILNMNDPDQKRVGEEIYRALLEK 497 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE--- 432 G +V DD G +F ADL+GFP+++ VG + + D +E+K R + +S++ Sbjct: 498 GEEVVLDDREVSPGFKFKDADLIGFPIRINVG-RSLKDGVIELKKRYSKELVKVSIQNGL 556 Query: 433 ----EVINYASHRFSNN 445 E +N + Sbjct: 557 GSLFEALNRMKAEYDPR 573 >gi|77747502|ref|NP_297735.2| prolyl-tRNA synthetase [Xylella fastidiosa 9a5c] gi|114152281|sp|Q9PG57|SYP_XYLFA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 564 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 113/223 (50%), Positives = 150/223 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+R+E Sbjct: 1 MRLSEFHLHTTKEIPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+EM +PT+Q +LW ES R++ +G ++L++ DR Y PT EE +TD R Sbjct: 61 MNRAGAVEMLLPTIQPRELWEESERWEKFGNQLLKIKDRKQAEYCYSPTAEEAVTDYVRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L Y M + Sbjct: 121 ELTSYKQLPVNLYQIQTKFRDEIRPRFGVMRAREFVMKDAYSFHLNDADLVREYENMRAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC 223 Y RIF RLGL+ ++A+SG IGGD S EF V+AD+GE + Sbjct: 181 YTRIFTRLGLEFRAVQADSGAIGGDASQEFHVIADSGEDVLAF 223 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 65/184 (35%), Positives = 96/184 (52%), Gaps = 2/184 (1%) Query: 258 ATSDVHNEKLFD-SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D ++ K ARGIEVGH+F G KY+ M AT GK + MG Sbjct: 380 VVADIRNVIEGDRAVDGGKICIARGIEVGHVFQLGRKYAEAMKATVLDEYGKAVTMTMGC 439 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+VAA IE +HD GIIWP S+AP+++++ I D V A E + A L Sbjct: 440 YGIGVSRIVAAAIEQNHDVAGIIWPASIAPWQVAVCVINPKKDPVITAAAEVLLAELQSA 499 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D DD G + G FA +L+G P +++V + ++ E + R T + E++ ++ Sbjct: 500 DVDTVLDDRGLRPGVMFADMELIGIPHRIVVSERGLAAGTYEYRARHTAMVENLDKTTLL 559 Query: 436 NYAS 439 Sbjct: 560 MRIK 563 >gi|282896497|ref|ZP_06304517.1| Prolyl-tRNA synthetase [Raphidiopsis brookii D9] gi|281198603|gb|EFA73484.1| Prolyl-tRNA synthetase [Raphidiopsis brookii D9] Length = 604 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 126/294 (42%), Positives = 169/294 (57%), Gaps = 5/294 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+++P DAEI SHKL+LR G I + G+Y++LPL + L ++ IIREE Sbjct: 2 MRLSQKLFVTLRDDPADAEIPSHKLLLRAGYIRRIGSGVYAYLPLMWRVLQKISQIIREE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N TGA E +P LQ A+LW ESGR+D+Y K M L DR ++ + GPTHEEV+T I Sbjct: 62 MNATGAEECLLPQLQPAELWKESGRWDTYTKAEGIMFSLIDRREQHLGLGPTHEEVITTI 121 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF E K +Y M Sbjct: 122 GRDMIRSYRQLPVHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHTDEESLKKTYQDM 181 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 + +Y I R GL + A+SG IGG S EF+VLAD GE +V ++D + Sbjct: 182 YKAYSNILRRCGLAFRAVEADSGAIGGSGSTEFMVLADAGEDEVLYTQDGKYAANVEKAV 241 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 ++ P AAT + EK+ D L + + + ++ G Sbjct: 242 SLPADAEPSNFKTCEKVPTAATETI--EKVCDYLKCSPTQVVKNVLYQTVYDQG 293 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 71/202 (35%), Positives = 109/202 (53%), Gaps = 5/202 (2%) Query: 247 SIVEQWTAPYAATSDVHNEKLFDSL---PENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + EQ+ P D+ K D P +ARGIE GHIF GTKYSL M AT+ Sbjct: 401 NWQEQFKLPE-LVVDIRKAKPGDRSVHDPSQTLETARGIEAGHIFQLGTKYSLAMGATYT 459 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 G++ + MG YG+G R+ + +E S+DG GIIWP ++AP+ + D + Sbjct: 460 NEQGEEKPLVMGCYGVGVSRLAQSAVEQSYDGDGIIWPVAIAPYHAIISIPNIKDSQQVE 519 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 EKIY L+KVG + DD E+ G +F ADL+G P +++ G + ++ KVE+ R T Sbjct: 520 IAEKIYTELNKVGIETLLDDRNERAGVKFKDADLIGIPYRIVTG-RSITHGKVEVVTRAT 578 Query: 424 GIREDMSLEEVINYASHRFSNN 445 +++++E+++N S Sbjct: 579 RESKEIAIEDLVNTLESWISQR 600 >gi|148560208|ref|YP_001259002.1| threonyl-tRNA synthetase [Brucella ovis ATCC 25840] gi|148371465|gb|ABQ61444.1| threonyl-tRNA synthetase [Brucella ovis ATCC 25840] Length = 693 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 152/445 (34%), Gaps = 40/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD ++ L + G+ W G K N+ + +R + Sbjct: 268 QAYLHMLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 325 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 326 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 385 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F + + Sbjct: 386 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRIN 445 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G + I ++ + P S E A++ V E Sbjct: 446 -DLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVL------------EQI 492 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I+ A Y + L D++ + ++ FG Sbjct: 493 RQQSNNIKTGILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------ 543 Query: 298 MSATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G K V + G+M ++ + G +W V ++ Sbjct: 544 --AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATIT---- 597 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + ++ A+L G V D E+I + L P+ ++ G + + V Sbjct: 598 --SDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHSLQKVPVILVCGKREAEEKTV 655 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + +E M+L+E I Sbjct: 656 NMRRLGSRDQESMTLDEAIARLCEE 680 >gi|116512847|ref|YP_811754.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11] gi|122939966|sp|Q02WN1|SYT_LACLS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|116108501|gb|ABJ73641.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11] Length = 646 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 166/441 (37%), Gaps = 35/441 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L + +E RD +L L + G WLP G + + +++ + G Sbjct: 232 LKLREEAKERDHRKLGRELDLF-FNDAELGAGTAYWLPAGATIRRIIERFVVDQEVKNGY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSY 125 + P + + + + +SG + Y ++M D D + M P + I++ H+ SY Sbjct: 291 QHVITPVMMNLNTYKQSGHWQHYHEDMYPPMDMGDGEEMELRPMNCPSHIAIYKHHVHSY 350 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + + R E G+ R RE + D ++F + + + ++K+ + + Sbjct: 351 RELPIRIAEFGMMHRYEKSGALSGLQRVREMTLNDGHTFVMLEQVQEE-FSKILQLIMDM 409 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDII 243 + G+ R D +T + D M + DD+ Sbjct: 410 YRDFGINDYSFRLS--------------YRDPKDTVKYFPDDEMWEKSQAMLKATMDDMK 455 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 E A Y D+ ++ +L + +S ++ + ++ Sbjct: 456 LDYVEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLDFLNP--------ENFDISYV 504 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 GADG+ H M G + + I + +P +AP + ++I + +++ D Sbjct: 505 GADGEKHRPVMIHR--GVISTLERFIAYLIEVYKGAFPTWLAPTQATIIPVN--NEIHAD 560 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 KI L G V D+ E++G + + P Q+++G + ++ V I+ + Sbjct: 561 YAWKIQRELQDKGFRVVVDEANEKMGWKIRQSQTHKIPYQIVIGDQEQANGTVNIRRYGS 620 Query: 424 GIREDMSLEEVINYASHRFSN 444 E + E+ I S +N Sbjct: 621 KETEVIPFEDFIEKISADVAN 641 >gi|302866733|ref|YP_003835370.1| threonyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029] gi|302569592|gb|ADL45794.1| threonyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029] Length = 672 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 69/444 (15%), Positives = 131/444 (29%), Gaps = 35/444 (7%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E R D L L + + G+ + P G + +R Sbjct: 250 KAYLKLLEEAARRDHRKLGADLDLFS-FPDEIGSGLPVFHPKGGVLKRVMEDYVRARHVE 308 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + L+ SG Y M + + + I+RS + Sbjct: 309 EGFDYVGTPHISKEGLFHTSGHLPYYKDTMFPPMEMEGSDYYLKAMNCPMHNLIYRSRGR 368 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ +R E G+ R R F D++S+ + + L Sbjct: 369 SYRQLPIRLFEFGTVYRYEKSGVIHGLTRVRGFTQDDSHSYCTREQAPSE-IKHLLGFVL 427 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + G+ + + ++ + S + Sbjct: 428 SLLRDFGIDDFYLELSTRD-------------ESKPDKFVGSDSDWATATAVLEQCGLET 474 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + + D++ ++S + FG + Sbjct: 475 GLELVPDPGGAAFYGPKI---SVQAKDAIGRTWQMSTIQYDFNQPKGFG--------LEY 523 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + ADG + G++ V+ + G W V I + Sbjct: 524 QAADGTRQQPVMIHCAKFGSIERFIGVLTEHYAGAFPAWLAPVQVVGIPI------RDEH 577 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D A L + G D E++ + A P VI G V+ V ++R Sbjct: 578 GDYLVDFAATLRRHGIRAEVDLGDERMQKKIRNAQQQKIPFMVIAGDDDVAAGTVSFRYR 637 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 R + ++E + + + Sbjct: 638 DGSQRNGVPVDEAVAHVREVVESR 661 >gi|58337807|ref|YP_194392.1| threonyl-tRNA synthetase [Lactobacillus acidophilus NCFM] gi|227904456|ref|ZP_04022261.1| theronyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796] gi|73919799|sp|Q5FIW3|SYT_LACAC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|58255124|gb|AAV43361.1| theronyl-tRNA synthetase [Lactobacillus acidophilus NCFM] gi|227867831|gb|EEJ75252.1| theronyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796] Length = 644 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 79/434 (18%), Positives = 153/434 (35%), Gaps = 36/434 (8%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L L + + G+ W+P G V I + + G + P L Sbjct: 239 RDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYKHVYTPVL 296 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y +M D D M P + I++ HI+SYR+LP Sbjct: 297 MNLDAYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVA 356 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + K+ + ++ + Sbjct: 357 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVELDQVQSE-FAKILKLIMDVYRDFDITD 415 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + F + + + DD+ E Sbjct: 416 YYFRLS-------------YRDPKNTDKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGE 462 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ T+ G DG++H Sbjct: 463 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----GLTYVGKDGEEHRP 511 Query: 313 -QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + +G M A + + G W + I +++ + EK+ Sbjct: 512 VMVHRGIVGTMERFIAYLTEIYKGAFPTWLA-----PVQAEIIPVNNEAHGEYAEKVRQE 566 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+K G V DD E++G + + P +++G + + + V ++ T SL Sbjct: 567 LAKRGFRVEVDDRNEKMGYKIRESQTQKVPYTLVLGDEEMKNGSVNVRRYGTDEEISKSL 626 Query: 432 EEVINYASHRFSNN 445 ++ IN + Sbjct: 627 DDFINEIDADVKSY 640 >gi|254225105|ref|ZP_04918719.1| prolyl-tRNA synthetase [Vibrio cholerae V51] gi|125622492|gb|EAZ50812.1| prolyl-tRNA synthetase [Vibrio cholerae V51] Length = 571 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 115/237 (48%), Positives = 154/237 (64%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M V+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYEAMHVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL P+ A++G IGG+ SHEF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 67/190 (35%), Positives = 111/190 (58%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N D + + RGIEVGHIF GT YS M+ ++GK+ ++M Sbjct: 382 GKVEDLRNVVEGDPSPCGKGTLMLKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVAA IE +HD GIIWPD++APF+++++ + + + A EK+YA L+ Sbjct: 442 GCYGIGVSRVVAAAIEQNHDDYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G +V +DD E+ G F+ +L+G P +I+G + + + E K+R +G +E +++ Sbjct: 502 AAGIEVLFDDRKERPGVMFSDMELIGVPHTLIIGDRSMDEGHFEYKNRRSGEKEAVAMAS 561 Query: 434 VINYASHRFS 443 +I++ + + Sbjct: 562 IIDFIHAKLA 571 >gi|225076521|ref|ZP_03719720.1| hypothetical protein NEIFLAOT_01569 [Neisseria flavescens NRL30031/H210] gi|224952200|gb|EEG33409.1| hypothetical protein NEIFLAOT_01569 [Neisseria flavescens NRL30031/H210] Length = 570 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 163/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V I+REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 121 EVNSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYQDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL+ P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCRIFARLGLEFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIE 234 Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats. Identities = 68/226 (30%), Positives = 110/226 (48%), Gaps = 7/226 (3%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQW----TAPYAATSDVHNEKLFDSLPE--NKRVS 278 K + DF + + A D+ N D P+ + Sbjct: 344 KVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEFVDLRNVIEGDISPDEQGRLKL 403 Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 404 ARGIEVGHVFQLRNKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 463 Query: 339 IWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 +W ++APF++ ++ + + R+A +KIYA L G DV DD E+ G ++L Sbjct: 464 VWTKAMAPFEVVIVPMNYKKSEAVREAADKIYAELLAAGADVLLDDRDERAGVLLNDSEL 523 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 LG P ++++G + + + VE R + +++ EV+ + Sbjct: 524 LGIPHRIVIGDRALKEGNVEYAERRDNQAQAVAISEVVAKVLAALN 569 >gi|212212292|ref|YP_002303228.1| threonyl-tRNA synthetase [Coxiella burnetii CbuG_Q212] gi|212010702|gb|ACJ18083.1| threonyl-tRNA synthetase [Coxiella burnetii CbuG_Q212] Length = 660 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 83/447 (18%), Positives = 147/447 (32%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K +L L+E RD + + K+ L S G W P G + + IR Sbjct: 235 KALKAYLYRLEEAEKRDHRLLAKKMDLF--HFQPESPGNVFWHPNGWSIILQMREYIRHI 292 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G E+ P L A LW +SG + +G ++ L + + P IF Sbjct: 293 THKYGYQEVHTPQLIDASLWDKSGHLEKFGDDIFSLPLEP-QQYVIKPMSCPAHVQIFNQ 351 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + + R+E G+MR R F+ DA+ F + + Sbjct: 352 GVKSYRDLPLRYAEFGACHRNEPSGTLHGLMRLRGFVQDDAHIFCTEDQIQSE-VSAFID 410 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + + + P S E A+ + K +P E Sbjct: 411 QLHEVYADFGFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEALNRKGVEWDILPGE---- 466 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 A Y + L D L + ++ G Sbjct: 467 -------------GAFYGPKIEF---SLRDCLGRIWQCGTVQVDFSVPERLG-------- 502 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + DG + +G+ ++ GK +W V +++ Sbjct: 503 AHYIAEDGSKKPPVMIHRAILGSFERFLGILLEESAGKLPLWLAPVQVVVMNIT------ 556 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D + L +G D E+IG + + P V++G + V+D + + Sbjct: 557 DRQADYVGQTVENLQNLGIRAHSDLRNEKIGFKIREHTIARVPYLVVIGDREVADKTLSV 616 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + ++LEE S Sbjct: 617 RALEDEASTTITLEEFARQLKAEISQR 643 >gi|125624939|ref|YP_001033422.1| ThrS protein [Lactococcus lactis subsp. cremoris MG1363] gi|166223350|sp|A2RN48|SYT_LACLM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|124493747|emb|CAL98736.1| ThrS protein [Lactococcus lactis subsp. cremoris MG1363] gi|300071738|gb|ADJ61138.1| threonyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000] Length = 646 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 83/441 (18%), Positives = 166/441 (37%), Gaps = 35/441 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L + +E RD +L L + G WLP G + + +++ + G Sbjct: 232 LKLREEAKERDHRKLGRELDLF-FNDAELGAGTAYWLPAGATIRRIIERFVVDQEVKNGY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSY 125 + P + + + + +SG + Y ++M D D + M P + I++ H+ SY Sbjct: 291 QHVITPVMMNLNTYKQSGHWQHYHEDMYPPMDMGDGEEMELRPMNCPSHIAIYKHHVHSY 350 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + + R E G+ R RE + D ++F + + + ++K+ + + Sbjct: 351 RELPIRIAEFGMMHRYEKSGALSGLQRVREMTLNDGHTFVMLEQVQEE-FSKILQLIMDM 409 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDII 243 + G+ R D +T + D M + DD+ Sbjct: 410 YRDFGINDYSFRLS--------------YRDPKDTVKYFPDDEMWEKSQAMLKATMDDMK 455 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 E A Y D+ ++ +L + +S ++ + ++ Sbjct: 456 LDYVEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLDFLNP--------ENFDISYV 504 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 GADG+ H M G + + I + +P +AP + ++I + +++ D Sbjct: 505 GADGEKHRPVMIHR--GVISTLERFIAYLIEVYKGAFPTWLAPTQATIIPVN--NEIHAD 560 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 KI L G V D+ E++G + + P Q+++G + +D V I+ + Sbjct: 561 YAWKIQRELQDKGFRVVVDEANEKMGWKIRQSQTHKIPYQIVIGDQEQADGTVNIRRYGS 620 Query: 424 GIREDMSLEEVINYASHRFSN 444 E + E+ I S +N Sbjct: 621 KETEVIPFEDFIEKISADVAN 641 >gi|325140439|gb|EGC62960.1| prolyl-tRNA synthetase [Neisseria meningitidis CU385] Length = 599 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 30 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 89 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 90 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 149 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 150 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYQDMYDA 209 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 210 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANVE 263 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 7/229 (3%) Query: 222 FCSKDFMDFPIPSENTDFDDIISLNSIVEQW----TAPYAATSDVHNEKLFDSLPEN--K 275 F K + DF + + A D+ N D P+ + Sbjct: 370 FTGKVYADFATEKDADWVIGANEDGYHYTGFNFGRDAAEPEFVDLRNVVEGDESPDGQGR 429 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 RGIEVGH+F KY+ M+ F +GK ++MG YGIG RVVAA IE ++D Sbjct: 430 LKLTRGIEVGHVFQLRDKYTHAMNVNFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDE 489 Query: 336 KGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KGIIW ++APF++ ++ + R+A +KIYA L G DV DD E+ G Sbjct: 490 KGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERAGVLLND 549 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 ++LLG P ++++G + + + VE R + +++ E++ + + Sbjct: 550 SELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVARVTASLN 598 >gi|254521784|ref|ZP_05133839.1| prolyl-tRNA synthetase [Stenotrophomonas sp. SKA14] gi|219719375|gb|EED37900.1| prolyl-tRNA synthetase [Stenotrophomonas sp. SKA14] Length = 567 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 114/223 (51%), Positives = 150/223 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V I+REE Sbjct: 1 MRLSQFHLHTTKETPSDAELTSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E +PT+Q +LW ++GR+ +G ++L++ DR D+ Y PT EE D RS Sbjct: 61 MDRAGAVEFQIPTIQPKELWEQTGRWQKFGPQLLKIKDRKDQVFCYSPTAEEAACDFARS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQ+Q KFRDE+RPRFGVMRSREFLMKDAYSF L E Y M + Sbjct: 121 ELSSYKQLPVNFYQVQTKFRDEIRPRFGVMRSREFLMKDAYSFHLHDECLVREYENMKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC 223 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE + Sbjct: 181 YSRIFTRLGLDFRMVQADSGAIGGDASQEFHVIADSGEDALVF 223 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 60/184 (32%), Positives = 91/184 (49%), Gaps = 2/184 (1%) Query: 258 ATSDVHNEKLFD-SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N + D +L + ARGIEVGH+F G Y+ + AT +GK + MG Sbjct: 383 EVADIRNVRAGDRALDGGELKIARGIEVGHVFQLGRTYAKALDATVLDENGKAAVMAMGC 442 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE-KIYARLSKV 375 YGIG RVVAA IE +HD GIIWPD++AP+++ + I + L Sbjct: 443 YGIGISRVVAAAIEQNHDDAGIIWPDAMAPWQVVVCVINPKGDAAVADAAASLLQELRDA 502 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G D DD G + G+ FA +L+G P +V+V + ++ E + R E + ++ Sbjct: 503 GLDAALDDRGLRPGAMFADMELIGIPHRVVVSERGLAAGTYEYRSRRASEAESLDKATLL 562 Query: 436 NYAS 439 Sbjct: 563 QRLQ 566 >gi|190572717|ref|YP_001970562.1| prolyl-tRNA synthetase [Stenotrophomonas maltophilia K279a] gi|226701342|sp|B2FMR5|SYP_STRMK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|190010639|emb|CAQ44248.1| putative prolyl-tRNA synthetase [Stenotrophomonas maltophilia K279a] Length = 567 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 114/223 (51%), Positives = 150/223 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V I+REE Sbjct: 1 MRLSQFHLHTTKETPSDAELTSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E +PT+Q +LW ++GR+ +G ++L++ DR D+ Y PT EE D RS Sbjct: 61 MDRAGAVEFQIPTIQPKELWEQTGRWQKFGPQLLKIKDRKDQVFCYSPTAEEAACDFARS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQ+Q KFRDE+RPRFGVMRSREFLMKDAYSF L E Y M + Sbjct: 121 ELSSYKQLPVNFYQVQTKFRDEIRPRFGVMRSREFLMKDAYSFHLHDECLVREYENMKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC 223 Y RIF RLGL ++A+SG IGGD S EF V+AD+GE + Sbjct: 181 YSRIFTRLGLDFRMVQADSGAIGGDASQEFHVIADSGEDALVF 223 Score = 139 bits (351), Expect = 7e-31, Method: Composition-based stats. Identities = 65/187 (34%), Positives = 95/187 (50%), Gaps = 2/187 (1%) Query: 255 PYAATSDVHNEKLFD-SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 P +D+ N + D +L + ARGIEVGH+F G KY+ + AT +GK + Sbjct: 380 PEPEVADIRNVRAGDRALDGGELKIARGIEVGHVFQLGRKYAEALDATVLDENGKAAVMA 439 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARL 372 MG YGIG RVVAA IE +HD GIIWPD++AP+++ + I D DA + L Sbjct: 440 MGCYGIGISRVVAAAIEQNHDDAGIIWPDAMAPWQVVVCVINPKGDAAVADAAASLLQEL 499 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G D DD G + G+ FA +L+G P +V+V + + E + R E + Sbjct: 500 RDAGLDAALDDRGLRPGAMFADMELIGIPHRVVVSERGLGAGTYEYRSRRASEAESLDKA 559 Query: 433 EVINYAS 439 ++ Sbjct: 560 TLLQRLQ 566 >gi|291287861|ref|YP_003504677.1| threonyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809] gi|290885021|gb|ADD68721.1| threonyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809] Length = 637 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 83/443 (18%), Positives = 156/443 (35%), Gaps = 42/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L T + G +LP G + + ++E + G Sbjct: 228 YLNMLEEAEKRDHRKIGKQLKLFT-FSEEAGAGFPIYLPNGGALRNVLETYEKQEHIKRG 286 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P++ DLW +SG YD+Y + M +D P + +F S I+SY Sbjct: 287 YDIVYGPSILKQDLWKKSGHYDNYRENM-YFTKIDDVDYGVKPMNCLAHMMVFNSDIRSY 345 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++++ R E G++R R F DA+ F + + + + Sbjct: 346 RDLPQRYFELGTVHRHEKSGVLHGLLRVRAFTQDDAHLFCTPEQLNDE-IIGIIDFVDEV 404 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G E+ + T + S D + + Sbjct: 405 MGKFG------------------FEYEIEVSTKPEKYIGSDDNWEKATNALFEALKTKGL 446 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ KL D++ + + + F K+ + G Sbjct: 447 EYEINEGDGAFYGPKIDI---KLKDAIGRYWQCATIQAD----FNLPEKFD----LNYIG 495 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + +G++ V+ G +W I++ D Sbjct: 496 EDGQKHRPVMLHRVILGSVDRFIGVLTEHFAGAFPVWVAPKQVRVINIT------DGQLD 549 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C+ + +L G V D E++G + A + P +I+G V V ++ R Sbjct: 550 YCKALVQKLKAEGFRVDSDLRNEKVGFKIREAQMEKIPHMLIIGQNEVDKELVSVRLRNG 609 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 + ++ + + N+ Sbjct: 610 ENKNELDFSTYLGVLT-ELDKNK 631 >gi|328953980|ref|YP_004371314.1| threonyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] gi|328454304|gb|AEB10133.1| threonyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] Length = 640 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 80/438 (18%), Positives = 145/438 (33%), Gaps = 43/438 (9%) Query: 8 LPILQENPR-DAEIASHKLMLRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTG 65 L L+E R D +L L + I + + G+ + P G + + R E R G Sbjct: 233 LHFLEEAKRRDHRRLGRELGLFS--IEEEAGPGLVIYHPKGARLRLVLEDFERREHLRRG 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + PTL DLW SG +++Y + M + P + I++S I+SY Sbjct: 291 YQIVMGPTLLKLDLWKRSGHFENYRENM-YFTEIEGIDYGIKPMNCLAHMLIYKSSIRSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP +++ R E G+ R R+F DA+ + + + Sbjct: 350 RELPLRLFELGTVHRHERSGVLHGLTRVRQFTQDDAHILCRPDQVETE-IAGVIDFVAEV 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G E+ V T + S + + + Sbjct: 409 MAVFG------------------FEYEVELSTRPEKSIGSDEDWERATSALINALQTRNL 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D+ KL D++ + + + F ++ T+ G Sbjct: 451 PFATCEGEGAFYGPKIDI---KLKDAINRRWQCATVQCD----FTLPERFD----LTYIG 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG H + +G++ V+ + G +W V + + Sbjct: 500 PDGNPHRPVMLHRVILGSLERFLGVLIEHYAGAFPVWLAPVQAIILPVT------DRAHP 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + RL V D E++G + A L P +I+G + V+ + ++ Sbjct: 554 FALDVARRLQAEELRVETDLRNEKLGLKIREAQLQKIPYMIIIGDREVAAQTLSVRRLDG 613 Query: 424 GIREDMSLEEVINYASHR 441 +D EE + Sbjct: 614 TEIKDTPWEEFVRLLKTE 631 >gi|257456688|ref|ZP_05621878.1| threonyl-tRNA synthetase [Treponema vincentii ATCC 35580] gi|257445881|gb|EEV20934.1| threonyl-tRNA synthetase [Treponema vincentii ATCC 35580] Length = 586 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 79/438 (18%), Positives = 149/438 (34%), Gaps = 38/438 (8%) Query: 5 KYFLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L + + D +L L I + + G W P G V +R++ Sbjct: 172 KTYLTMQAEAEKHDHRKIGRELDLF--HIEEDNPGEVFWHPNGWTLYLTVQQHVRQKIKE 229 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G +E++ P + LW+ SG ++ Y + M + + + P + +IF+ IK Sbjct: 230 DGYVEVNTPFVMPQSLWLRSGHWEKYKENMF-ITESEKRMFALKPMNCPGHVEIFKQGIK 288 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F+ DA+ F + S Sbjct: 289 SYRDLPLRIAEFGSCTRNEPSGSLHGIMRVRGFVQDDAHIFCTEEQISSEVCK------- 341 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + G +V T + D + Sbjct: 342 ---------FCNLLKSLYRDFGFDDKAILVKFSTRPEKRVGDDATWDRAENALAEACKAA 392 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I A Y + L D+L + + +K ++A + Sbjct: 393 GLEYEIAPGEGAFYGPKLEF---TLVDALGREWQCGTIQADY----QLPSK--DRLNAEY 443 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G D + H + +G++ ++ G W V I + + Sbjct: 444 IGEDNQKHQPVMLHRAALGSLERFIGILIEQFGGALPPWLSPVQAMVIPVAPV------F 497 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + E+I + L+K G V D +++ ++ P Q++VG K + V ++ Sbjct: 498 NEYAEQIASVLTKAGFRVKADIDTDRMNAKIRKYQEQKIPYQLVVGEKEKQSNSVTVRLL 557 Query: 422 LTGIREDMSLEEVINYAS 439 G ++ MS++E + Sbjct: 558 K-GEQKTMSVDEFAAFLK 574 >gi|57234472|ref|YP_181487.1| threonyl-tRNA synthetase [Dehalococcoides ethenogenes 195] gi|123759710|sp|Q3Z8G2|SYT_DEHE1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|57224920|gb|AAW39977.1| threonyl-tRNA synthetase [Dehalococcoides ethenogenes 195] Length = 582 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 81/442 (18%), Positives = 154/442 (34%), Gaps = 40/442 (9%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + G+ +WLP G + ++E + G Sbjct: 174 YLNMLEESAKRDHRKLGKELELFSLH-QEIGGGLVNWLPNGAIVRHLIEEFWKKEHLKRG 232 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + DLW SG + Y + M D + + + P + +F++ +SY Sbjct: 233 YSLVYTPHIAKVDLWKTSGHWGFYRENMYSPMDIDGEEYVLKPMNCVYHILMFKNRTRSY 292 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 + LP ++ +R E G+ R R F DA+ F L + K + + Sbjct: 293 KELPIRMAELGTVYRYERSGVLHGLSRVRGFTQDDAHIFCLYEQLEKEVVK-VLDLAKFM 351 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G + + P + D ++ + Sbjct: 352 IDTFGFTRYKVMLSTRP-----------------EKYVGELDKWEYATDILAKALESNQI 394 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + Y D+ E D+L + ++ F ++ + G Sbjct: 395 AYQVDPGEGVFYGPKIDIKFE---DALGRAWQGPTIQVD----FQLPERFD----VSVVG 443 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DGKD V + +G+M + + + G +P ++P ++ LI I + Sbjct: 444 EDGKDQPVAMVHRTVLGSMERFMSCLT---EQYGGAFPVWLSPKQVMLIPIADRHS---E 497 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 EK+ L + V D+ E + + A L P ++VG K + V I+ R + Sbjct: 498 FAEKLACELREEEVRVEVDNRSETMNQKIRQAQLAKIPYMLVVGDKEIETQSVSIRTR-S 556 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G + M E + + Sbjct: 557 GSQCVMPFAEFKSMLIDKIKTK 578 >gi|315655426|ref|ZP_07908326.1| threonine--tRNA ligase [Mobiluncus curtisii ATCC 51333] gi|315490366|gb|EFU79991.1| threonine--tRNA ligase [Mobiluncus curtisii ATCC 51333] Length = 669 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 63/457 (13%), Positives = 135/457 (29%), Gaps = 47/457 (10%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y + + RD ++L L + + G+ + P G + R Sbjct: 245 LKEYVTRMEEAAKRDHRRLGNELDLFS-FPEEIGSGLAVFHPKGAMVRMEMENYSRRRHL 303 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTH 110 G + P + L+ SG + Y M + P + Sbjct: 304 EEGYSFVYTPHVTKGQLFETSGHLEWYKDGMFPPMRVDEECDDQGNVTKEGFDYYLKPMN 363 Query: 111 EEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEG 169 + I++S +SYR LP ++ +R E G+ R R F D++ + + Sbjct: 364 CPMHNLIYKSRSRSYRELPLRLFEFGTVYRYEKSGVVHGLTRGRGFTQDDSHIYCTREQM 423 Query: 170 SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMD 229 + L + GL + + + S + + Sbjct: 424 KDELTK-LLTFVLDLLKDYGLDDFYLELST----------------KNPHKFVGSDEIWE 466 Query: 230 FPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY 289 + + A Y + + D++ ++S ++ F Sbjct: 467 EATNTLAEVATASGLELVPDPEGAAFYGPKI---SVQARDAIGRTWQMSTIQLD----FN 519 Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 ++ L +A + V + G++ V+ + G W Sbjct: 520 LPERFDLEYTAA---DGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAW------LAP 570 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 + + + D C+ I RL V D ++ G + A P +I G + Sbjct: 571 VQVRLVPVAETFNDYCDDIANRLRAENVRVEVDTTDDRFGKKIRNAAKDKIPFTLIAGGE 630 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 + V ++R + + +++ I + R Sbjct: 631 DAEANAVSFRYRGGEQKNGVPIDQAIAEILEAIRSRR 667 >gi|28199512|ref|NP_779826.1| prolyl-tRNA synthetase [Xylella fastidiosa Temecula1] gi|182682245|ref|YP_001830405.1| prolyl-tRNA synthetase [Xylella fastidiosa M23] gi|81839496|sp|Q87B25|SYP_XYLFT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701358|sp|B2I7W6|SYP_XYLF2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|28057627|gb|AAO29475.1| prolyl-tRNA synthetase [Xylella fastidiosa Temecula1] gi|182632355|gb|ACB93131.1| prolyl-tRNA synthetase [Xylella fastidiosa M23] gi|307578519|gb|ADN62488.1| prolyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 564 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 113/223 (50%), Positives = 150/223 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+R+E Sbjct: 1 MRLSEFHLHTTKEIPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+EM +PT+Q +LW ES R++ +G ++L++ DR Y PT EE +TD R Sbjct: 61 MNRAGAVEMLLPTIQPRELWEESERWEKFGSQLLKIKDRKQAEYCYSPTAEEAVTDYVRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L Y M + Sbjct: 121 ELTSYKQLPVNLYQIQTKFRDEIRPRFGVMRAREFVMKDAYSFHLNDADLVREYENMRAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC 223 Y RIF RLGL+ ++A+SG IGGD S EF V+AD+GE + Sbjct: 181 YTRIFTRLGLEFRAVQADSGAIGGDASQEFHVIADSGEDVLAF 223 Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 64/184 (34%), Positives = 95/184 (51%), Gaps = 2/184 (1%) Query: 258 ATSDVHNEKLFD-SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D ++ K ARGIEVGH+F G KY+ M AT GK + MG Sbjct: 380 VVADIRNVIEGDRAVDGGKICIARGIEVGHVFQLGRKYAEAMKATVLDEYGKAVTMTMGC 439 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+VAA IE +HD GIIWP +AP+++++ I D V A E + A L Sbjct: 440 YGIGVSRIVAAAIEQNHDVAGIIWPAPIAPWQVAVCVINPKKDPVITAAAEMLLAELQSA 499 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D DD G + G FA +L+G P +++V + ++ E + R T + E++ ++ Sbjct: 500 DVDTVLDDRGLRPGVMFADMELIGIPHRIVVSERGLAAGTYEYRARRTAMVENLDKTTLL 559 Query: 436 NYAS 439 Sbjct: 560 TRIK 563 >gi|115638543|ref|XP_783415.2| PREDICTED: similar to Prolyl-tRNA synthetase (mitochondrial)(putative) isoform 1 [Strongylocentrotus purpuratus] gi|115931464|ref|XP_001186319.1| PREDICTED: similar to Prolyl-tRNA synthetase (mitochondrial)(putative) [Strongylocentrotus purpuratus] Length = 569 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 152/452 (33%), Positives = 223/452 (49%), Gaps = 42/452 (9%) Query: 2 RRSKYFLPI--LQE--NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAII 57 R SK + P L E D + SH+LM+ G+I Q S G + LPL +AL+ + +I Sbjct: 137 RVSKMYQPSFVLPEGSKVADVKCKSHRLMMEAGLIRQASPGTFHLLPLAMRALEKLIKVI 196 Query: 58 REEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDI 117 E + G ++++P + + LW SGRY YG E++ L DR++ GPTHEE +TDI Sbjct: 197 DTEMQKVGGQKIAMPGMTPSSLWKTSGRYSDYGPELITLQDRHNVDYCLGPTHEEAVTDI 256 Query: 118 FRSHI-KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 S++ LP YQI KFRDE+RPR+G++R REFLMKD Y+FD EG++ +Y Sbjct: 257 VAGEKTLSHKRLPIKLYQITNKFRDEMRPRYGLLRGREFLMKDLYTFDSNLEGAEETYRS 316 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + +Y RIF L L + +G IGG SHEF +L++ GE V+ Sbjct: 317 VCEAYQRIFSILDLPIVQAVGATGAIGGSFSHEFHLLSEIGEDHVYHCSRC--------- 367 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + V + S P+ +GIEVGH F GTKYS Sbjct: 368 --------------GYAVNQETVEGVPSCPDHPSTPDCNMSLRQGIEVGHAFLLGTKYSK 413 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A F DGK +MG YG+G R++AA IE K I WP +AP+++ +++ K Sbjct: 414 TFKADFYDKDGKPRLAEMGCYGLGVTRILAAAIEVLSSEKEIRWPQIIAPYQVCIVSPKE 473 Query: 357 HDQV--CRDACEKIYAR-------LSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIV 406 E +Y L+ D+ DD G IG + A +G+PL V+V Sbjct: 474 GGAERSAIHLAEWLYQDVCLHVPHLAA---DLLLDDRGHMTIGRRVKDAAHVGYPLIVVV 530 Query: 407 GSKFVS-DSKVEIKHRLTGIREDMSLEEVINY 437 G + + D K E+ + +G E +S +++ Sbjct: 531 GKRALEADPKFEVINTASGSTEYLSKVDLLQR 562 >gi|294673346|ref|YP_003573962.1| threonine--tRNA ligase [Prevotella ruminicola 23] gi|294474289|gb|ADE83678.1| threonine--tRNA ligase [Prevotella ruminicola 23] Length = 648 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 152/443 (34%), Gaps = 38/443 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD ++ L + KG+ WLP G + + +R+ Q R G Sbjct: 234 YLEMLEEAKKRDHRKIGKEMELFM-FSEKVGKGLPIWLPKGTELRLRLQDHLRKVQKRFG 292 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P + S +L+V SG Y YGK+ + D+ + P + +IF + Sbjct: 293 YQEVITPHIGSKNLYVTSGHYAHYGKDSFQPIHTPEEDEEYMLKPMNCPHHCEIFAWKPR 352 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + +R E G+ R R F DA+ F + + + + Sbjct: 353 SYRDLPLRIAEFGTVYRYEQSGELHGLTRVRSFTQDDAHLFCRPDQVKQE-FLNVMDIIG 411 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + G + P D + + + + + Sbjct: 412 IVLTAFGFNFEAQISLRDPNDHD--------------KYVGTDEDWALAEKAIVEACQEK 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y D + D++ ++ ++ + + Sbjct: 458 GLPAKVEYGEAAFYGPKLDFM---IKDAIGRRWQLGTIQVDYNLP--------KRFNLEY 506 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D + + G+M AV+ G +W + I + Sbjct: 507 TDEDNQKKTPVMIHRAPFGSMERFCAVLIEHTSGHFPLW------LTPDQVAILPLSEKY 560 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D +++ + G D E++G + +L P VIVG K ++ V ++ + Sbjct: 561 NDYAQEVAKKFDMGGVRATVDMRNEKLGRKIRDNELKRIPYMVIVGEKEAAEGTVAVRPQ 620 Query: 422 LTGIREDMSLEEVINYASHRFSN 444 G + +++E I+ + R + Sbjct: 621 GGGEQSVKTIQEFIDEVNARVAE 643 >gi|163735041|ref|ZP_02142478.1| threonyl-tRNA synthetase [Roseobacter litoralis Och 149] gi|161391823|gb|EDQ16155.1| threonyl-tRNA synthetase [Roseobacter litoralis Och 149] Length = 648 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 82/442 (18%), Positives = 140/442 (31%), Gaps = 45/442 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD ++ L + + + G W P G + +R +Q Sbjct: 234 KAHLTMLEEAAKRDHRKLGREMDLF--HMQEEAPGQVFWHPNGWSIYTTLQDYMRRKQRA 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG +D Y + M + R P + IF Sbjct: 292 AGYQEVNTPQVVDRKLWEASGHWDKYQEHMFIVEVDEEHAREKAVNALKPMNCPCHVQIF 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F D + F + + Sbjct: 352 NQGLKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCR-EDQIEAECAAF 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 ++ LG + + + P S E D + Sbjct: 411 ITYLSSVYQDLGFEKFEIMFATRPEKRVGSEE-----------------SWDHVEAALEN 453 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 ++ A Y D KL D++ + ++ Sbjct: 454 AIKATGHPYTLDAGEGAFYGPKLDF---KLTDAIGREWQCGTFQVDPNLP--------ER 502 Query: 298 MSATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + ATF G DG H + +G+ ++ + GK W S+I Sbjct: 503 LDATFIGEDGAKHRPYMLHRACLGSFERFIGILIENSAGKLPFWLAPRQVVVASIIT--- 559 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++ +L G D E+I + + P+ + VG++ V + V Sbjct: 560 ---DANDYVMQVVDQLKAAGVRAEADLRNEKINYKVREHSVGKVPVILAVGAREVEEQTV 616 Query: 417 EIKHRLTGIREDMSLEEVINYA 438 ++ SLE V Sbjct: 617 TLRRLGEKKTTVESLEAVTQAL 638 >gi|148909063|gb|ABR17634.1| unknown [Picea sitchensis] Length = 682 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 80/444 (18%), Positives = 160/444 (36%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKG-IYSWLPLGQKALDNVNAIIREEQN 62 K + + +E R D +L L + I + + G + W P G N+ + Sbjct: 273 KTYQFLKEEAKRRDHRRLGQELDLFS--IQEEAGGGLVFWHPRGAIIRQNIEDFWKRTHI 330 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G + P + ADLW SG + Y + M D D+ P + +++ + Sbjct: 331 QHGYELLYTPHVDKADLWKISGHLEFYKENMFNQMDIEDELYQLRPMNCPYHILVYKHSL 390 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LPF ++ +R E+ G+ R R F DA+ F L P K + Sbjct: 391 RSYRDLPFKVAELGTVYRYEMSGSLHGLFRVRGFTQDDAHIFCL-PSQIKDEIRGVLDLT 449 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I + K+ + + P + S + + +D Sbjct: 450 EAILSQFDFKNYEINLSTKP-----------------EKAVGSDVIWEKATSALKDALED 492 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 S+ E A Y D+ K+ D+L + S ++ F ++ L Sbjct: 493 KGWDYSVDEGGGAFYGPKIDL---KIEDALGRKWQCSTVQVD----FNLPQRFDLFY--- 542 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 K + + +G++ ++ + +P ++P + ++ + Sbjct: 543 IDSNSEKKRPIMIHRAILGSLERFFGILI---ENYAGDFPLWLSPVQARILPVT---DTQ 596 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 C+K+ A++ + GE++ ++ PL +VG + V + ++ R Sbjct: 597 VPYCQKVVAKMKEKDIRAELSY-GERLSKLIRNSETHKIPLMAVVGPREVESGTLTVRTR 655 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 G M+++EVI +N Sbjct: 656 HGGELGTMTIDEVIEKIKKAAANR 679 >gi|228954095|ref|ZP_04116124.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229071317|ref|ZP_04204540.1| Prolyl-tRNA synthetase [Bacillus cereus F65185] gi|228711771|gb|EEL63723.1| Prolyl-tRNA synthetase [Bacillus cereus F65185] gi|228805661|gb|EEM52251.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 566 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 122/267 (45%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFTRCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKALEKVATPDQKAIEEV 266 Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|254285550|ref|ZP_04960514.1| prolyl-tRNA synthetase [Vibrio cholerae AM-19226] gi|150424412|gb|EDN16349.1| prolyl-tRNA synthetase [Vibrio cholerae AM-19226] Length = 571 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 115/237 (48%), Positives = 154/237 (64%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M V+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYEAMHVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL P+ A++G IGG+ SHEF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 174 bits (441), Expect = 3e-41, Method: Composition-based stats. Identities = 67/190 (35%), Positives = 111/190 (58%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N D + + RGIEVGHIF GT YS M+ ++GK+ ++M Sbjct: 382 GKVEDLRNVVEGDPSPCGKGTLMLKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVAA IE +HD GIIWPD++APF+++++ + + + A EK+YA L+ Sbjct: 442 GCYGIGVSRVVAAAIEQNHDDYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G +V +DD E+ G F+ +L+G P +I+G + + + E K+R +G +E +++ Sbjct: 502 AAGIEVLFDDRKERPGVMFSDMELIGVPHTIIIGDRSMDEGHFEYKNRRSGEKEAVAMAS 561 Query: 434 VINYASHRFS 443 +I++ + + Sbjct: 562 IIDFIQAKLA 571 >gi|332529095|ref|ZP_08405059.1| threonyl-tRNA synthetase [Hylemonella gracilis ATCC 19624] gi|332041318|gb|EGI77680.1| threonyl-tRNA synthetase [Hylemonella gracilis ATCC 19624] Length = 644 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 83/446 (18%), Positives = 150/446 (33%), Gaps = 44/446 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + RD +L L + +HS G W P G V +R G Sbjct: 231 YILRMEEAEKRDHRKLGRELDLF--HLDEHSPGTVFWHPKGWTVWQEVEQYMRRVYRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D Y + M + + P + I++ +KSY Sbjct: 289 YREVKGPQILDKSLWEKTGHWDKYRENMFT-TESEKRDYALKPMNCPGHILIYKQGVKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F D + F T + + ++ Sbjct: 348 RDLPLRYGEFGACHRNEPTGGLHGIMRVRAFTQDDGHIFC-TEDQIQAEVKAFTSLLQKV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I + + P S E D + Sbjct: 407 YKDFGFTEIIYKLSTRPEKRIGSEE-----------------SWDRAENALAEGLRASGC 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D+L + ++ + A F G Sbjct: 450 EFDYLPGEGAFYGPKIEY---TLKDALGRQWQCGTIQVDPNLP--------ERLDAEFVG 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG H + +G++ ++ + G P +AP +++++NI D Sbjct: 499 EDGGRHRPVMLHRAIVGSLERFIGILI---EQHGGALPAWLAPTQVAVLNIT---DAQAD 552 Query: 364 ACEKIYARLSKV----GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 C++I +L K V D E+I + + P ++ G K + V ++ Sbjct: 553 YCQEIAQKLRKALPNQELRVETDLRNEKITYKIREHSMQKLPFILVAGDKEKAAGAVAVR 612 Query: 420 HRLTGIREDMSLEEVINYASHRFSNN 445 R MSL+ I + ++ Sbjct: 613 ARGNKDLGVMSLDAFIQLIAQDIAHK 638 >gi|9105289|gb|AAF83255.1|AE003895_6 prolyl-tRNA synthetase [Xylella fastidiosa 9a5c] Length = 582 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 113/223 (50%), Positives = 150/223 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+R+E Sbjct: 19 MRLSEFHLHTTKEIPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVRDE 78 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+EM +PT+Q +LW ES R++ +G ++L++ DR Y PT EE +TD R Sbjct: 79 MNRAGAVEMLLPTIQPRELWEESERWEKFGNQLLKIKDRKQAEYCYSPTAEEAVTDYVRQ 138 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L Y M + Sbjct: 139 ELTSYKQLPVNLYQIQTKFRDEIRPRFGVMRAREFVMKDAYSFHLNDADLVREYENMRAT 198 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC 223 Y RIF RLGL+ ++A+SG IGGD S EF V+AD+GE + Sbjct: 199 YTRIFTRLGLEFRAVQADSGAIGGDASQEFHVIADSGEDVLAF 241 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 65/184 (35%), Positives = 96/184 (52%), Gaps = 2/184 (1%) Query: 258 ATSDVHNEKLFD-SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D ++ K ARGIEVGH+F G KY+ M AT GK + MG Sbjct: 398 VVADIRNVIEGDRAVDGGKICIARGIEVGHVFQLGRKYAEAMKATVLDEYGKAVTMTMGC 457 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+VAA IE +HD GIIWP S+AP+++++ I D V A E + A L Sbjct: 458 YGIGVSRIVAAAIEQNHDVAGIIWPASIAPWQVAVCVINPKKDPVITAAAEVLLAELQSA 517 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D DD G + G FA +L+G P +++V + ++ E + R T + E++ ++ Sbjct: 518 DVDTVLDDRGLRPGVMFADMELIGIPHRIVVSERGLAAGTYEYRARHTAMVENLDKTTLL 577 Query: 436 NYAS 439 Sbjct: 578 MRIK 581 >gi|330445168|ref|ZP_08308820.1| prolyl-tRNA synthetase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489359|dbj|GAA03317.1| prolyl-tRNA synthetase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 571 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 113/237 (47%), Positives = 153/237 (64%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHTRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY+ M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKEGLQKSYDAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL+ P+ A+SG IGG+ S EF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLEYRPVWADSGAIGGNGSQEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 179 bits (453), Expect = 9e-43, Method: Composition-based stats. Identities = 69/206 (33%), Positives = 116/206 (56%), Gaps = 3/206 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPM 298 D I D+ N D + + RGIEVGHIF GT YS M Sbjct: 366 DDKHHVGINWGRDVELGRVEDLRNVVEGDPSPCGQGTLMLKRGIEVGHIFQLGTTYSEKM 425 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 + ++GK+ ++MG YGIG RVVA+ IE ++D GIIWPD++APF++S++ + Sbjct: 426 NCGVLDSNGKNVILEMGCYGIGVSRVVASAIEQNNDENGIIWPDAIAPFQVSIVPMNMAK 485 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + ++A EK+YA L+ G DV +DD E+ G FA +L+G P +++G++ + + ++E Sbjct: 486 SEEVKEAAEKLYAELTAAGIDVLFDDRKERPGVMFADHELIGIPHTIVIGNRSLENGEME 545 Query: 418 IKHRLTGIREDMSLEEVINYASHRFS 443 K+R G +E +++ +V+ + + + Sbjct: 546 YKNRRAGTKEAVAVNDVVEFLKQKLA 571 >gi|284799796|ref|ZP_05984887.2| proline--tRNA ligase [Neisseria subflava NJ9703] gi|284796829|gb|EFC52176.1| proline--tRNA ligase [Neisseria subflava NJ9703] Length = 595 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 163/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V I+REE Sbjct: 26 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENIVREE 85 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 86 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 145 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 146 EVNSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYQDMYDA 205 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL+ P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 206 YCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIE 259 Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 7/226 (3%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQW----TAPYAATSDVHNEKLFDSLPE--NKRVS 278 K + DF + + A D+ N D P+ + Sbjct: 369 KVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEFVDLRNVIEGDISPDEQGRLKL 428 Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 429 ARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 488 Query: 339 IWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 +W ++APF++ ++ + R+A +KIYA L G DV DD E+ G ++L Sbjct: 489 VWTKAMAPFEVVIVPMNYKKSDAVREAADKIYAELLAAGADVLLDDRDERAGVLLNDSEL 548 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 LG P ++++G + + + VE R + +++ EV+ + Sbjct: 549 LGIPHRIVIGDRALKEGNVEYAERRNNQAQAVAVSEVVAKVLAALN 594 >gi|260433159|ref|ZP_05787130.1| threonyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157] gi|260416987|gb|EEX10246.1| threonyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157] Length = 652 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 83/443 (18%), Positives = 147/443 (33%), Gaps = 45/443 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD ++ L + + + G W P G + +R +Q R Sbjct: 238 KAYLHMLEEAAKRDHRKLGREMDLF--HMQEEAPGQIFWHPNGWTIYTQLQDYMRRQQRR 295 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G +E++ P + LW SG +D Y + M + R P + +IF Sbjct: 296 GGYVEVNTPQVVDRKLWERSGHWDKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVEIF 355 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F + + Sbjct: 356 KQGLKSYRDLPLRMAEFGSCARYEPSGALHGIMRVRGFAQDDAHIFSTEDQIGDEC-ARF 414 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 ++ LG S ++ P S E D + T Sbjct: 415 IGFLTDVYKDLGFDSFKVKFSDRPEQRAGSDE-----------------VWDKAEEALLT 457 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + A Y + L D++ + + ++ F + Sbjct: 458 ATRAAGVEPELNPGEGAFYGPKLEF---VLTDAIGRDWQCGTFQVD----FVLPER---- 506 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + AT+ GADG H + +G+ ++ H GK W S+ Sbjct: 507 LDATYIGADGAKHRPVMLHRACLGSFERFIGILIEEHAGKLPFWLAPRQVVVASIT---- 562 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++ L G D E+I + + P+ + VG + V + V Sbjct: 563 --SEADDYVLEVVETLKAAGVRAEADIRNEKINYKVREHSVGKVPVILAVGHREVEERTV 620 Query: 417 EIKHRLTGIREDMSLEEVINYAS 439 ++ + L+ V + Sbjct: 621 SVRRLGEKQTQVQPLDAVTKELA 643 >gi|165924098|ref|ZP_02219930.1| threonyl-tRNA synthetase [Coxiella burnetii RSA 334] gi|165916454|gb|EDR35058.1| threonyl-tRNA synthetase [Coxiella burnetii RSA 334] Length = 653 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 83/447 (18%), Positives = 147/447 (32%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K +L L+E RD + + K+ L S G W P G + + IR Sbjct: 235 KALKAYLYRLEEAEKRDHRLLAKKMDLF--HFQPESPGNVFWHPNGWSIILQMREYIRHI 292 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G E+ P L A LW +SG + +G ++ L + + P IF Sbjct: 293 THKYGYQEVHTPQLIDASLWDKSGHLEKFGDDIFSLPLEP-QQYVIKPMSCPAHVQIFNQ 351 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + + R+E G+MR R F+ DA+ F + + Sbjct: 352 GVKSYRDLPLRYAEFGACHRNEPSGTLHGLMRLRGFVQDDAHIFCTEDQIQSE-VSAFID 410 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + + + P S E A+ + K +P E Sbjct: 411 QLHEVYADFGFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEALNRKGVEWDILPGE---- 466 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 A Y + L D L + ++ G Sbjct: 467 -------------GAFYGPKIEF---SLRDCLGRIWQCGTVQVDFSVPERLG-------- 502 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + DG + +G+ ++ GK +W V +++ Sbjct: 503 AHYIAEDGSKKPPVMIHRAILGSFERFLGILLEESAGKLPLWLAPVQVVVMNIT------ 556 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D + L +G D E+IG + + P V++G + V+D + + Sbjct: 557 DRQADYVGQTVENLQNLGIRAHSDLRNEKIGFKIREHTIARVPYLVVIGDREVADKTLSV 616 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + ++LEE S Sbjct: 617 RALEDEASTTITLEEFARQLKAEISQR 643 >gi|270308068|ref|YP_003330126.1| threonyl-tRNA synthetase (thrS) [Dehalococcoides sp. VS] gi|270153960|gb|ACZ61798.1| threonyl-tRNA synthetase (thrS) [Dehalococcoides sp. VS] Length = 582 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 152/442 (34%), Gaps = 39/442 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ +WLP G + ++E + G Sbjct: 174 YLNMIEEAAKRDHRKLGKELELFSLH-QEIGGGLVNWLPNGATIRHLIEEFWKKEHLKRG 232 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + DLW SG + Y + M D + + + P + +F++ +SY Sbjct: 233 YNLVYTPHIAKVDLWKTSGHWGFYRENMYSPMDIDGEEYVLKPMNCVYHILMFKNRTRSY 292 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 + LP ++ +R E G+ R R F DA+ F L + K + + Sbjct: 293 KELPIRMAELGTVYRYERSGVLHGLSRVRGFTQDDAHIFCLYEQLEKEVVK-VLDLAKFM 351 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G + + P + ++ + Sbjct: 352 IDTFGFAKYKVMLSTRP-----------------EKYVGELAKWEYATDILAKALEANGI 394 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + Y D+ E D+L + ++ F ++ + G Sbjct: 395 SYQVDPGEGVFYGPKIDIKFE---DALGRAWQGPTIQVD----FQLPERF----EVSVVG 443 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DGKD V + +G+M + + + G +P ++P ++ +I I + Sbjct: 444 EDGKDQPVAMVHRTVLGSMERFMSCLT---EQYGGAFPVWLSPKQVMIIPIADRHS---E 497 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 EK+ L + V D+ E + + A L P ++VG K + + ++ R+ Sbjct: 498 FAEKLACELREEEVRVEVDNRSETMNQKIRQAQLAKIPYMLVVGDKEIETGSIALRSRI- 556 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G ++ M E + ++ Sbjct: 557 GSQQVMPFAEFKSMLLNKIKTK 578 >gi|225630645|ref|YP_002727436.1| threonyl-tRNA synthetase [Wolbachia sp. wRi] gi|254783546|sp|C0R403|SYT_WOLWR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|225592626|gb|ACN95645.1| threonyl-tRNA synthetase [Wolbachia sp. wRi] Length = 633 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 86/442 (19%), Positives = 156/442 (35%), Gaps = 40/442 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L L+E RD + + L I + + G W G + + + IR++ Sbjct: 227 NAYLECLKEAEKRDHRKIAKDMDLF--HIQEEAVGQVFWHEQGYILYNVLESYIRKKLIN 284 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L S +LW +SG +D + + M + + K + P + IF SH + Sbjct: 285 NGYFEVKTPILVSKELWEKSGHWDKFRENMFIVDESESKKLAIKPMNCPCHVQIFNSHTR 344 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F DA+ F + + + + Sbjct: 345 SYRDLPIRMAEFGTCHRNESSGSLHGLMRVRGFTQDDAHIFCMEEQVNSETIKF-CDLLK 403 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ LG I ++ P E D + + Sbjct: 404 EVYSELGFNEISVKFSDRPDVRAGDDE-----------------VWDRAEKALLEAVKEA 446 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + L D++ + + ++ G A + Sbjct: 447 GLSYELSPGEGAFYGPKLEF---VLKDAIGRSWQCGTLQVDFILPERLG--------AFY 495 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 GADG H+ + +G ++ ++ GK +W +++ N Sbjct: 496 IGADGHKHHPVMLHRAILGTFERFIGILIENYAGKFPVWLAPTQLAILTITN------EA 549 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 KI L + G V D E+I + + L P+ IVG V+ V +++ Sbjct: 550 DGYATKISNVLKEQGVRVKTDLTNEKISYKIRLHSLNKVPILWIVGKNEVTSKTVSVRNL 609 Query: 422 LTGIREDMSLEEVINYASHRFS 443 + +E SLE+ I + Sbjct: 610 GSERQESFSLEKAIELLLKSIN 631 >gi|209694468|ref|YP_002262396.1| prolyl-tRNA synthetase [Aliivibrio salmonicida LFI1238] gi|226731423|sp|B6EHZ8|SYP_ALISL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|208008419|emb|CAQ78577.1| prolyl-tRNA synthetase [Aliivibrio salmonicida LFI1238] Length = 571 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 115/237 (48%), Positives = 153/237 (64%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHQLMLRAGMIRRLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEEMGPELLRFTDRHARPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY+ M + Sbjct: 121 EVNSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKEGLQKSYDAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y R F R+GL+ P+ A+SG IGG S EF VLA++GE + D+ E Sbjct: 181 YCRAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 166 bits (419), Expect = 9e-39, Method: Composition-based stats. Identities = 61/175 (34%), Positives = 101/175 (57%), Gaps = 1/175 (0%) Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 + RGIEVGHIF GT YS M+ A+GK+ ++MG YGIG RVVA+ I Sbjct: 397 PCGQGTLQLKRGIEVGHIFQLGTAYSEAMNCGVLDANGKNSILEMGCYGIGVSRVVASAI 456 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 E ++D GI+WP+++APF ++++ + ++A EK+YA L+ +G DV +DD E+ Sbjct: 457 EQNNDEYGIVWPEALAPFTVAIVPMNMYKSDRVKEAAEKLYAELTAMGIDVLFDDRKERP 516 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G F +L+G P V++G + + + E K+R +E + + ++ + + S Sbjct: 517 GVMFKDIELIGIPHTVVIGDRSMDEGNFEYKNRRANSKEVIEIANIVEHIKAQLS 571 >gi|313668476|ref|YP_004048760.1| prolyl-tRNA synthetase [Neisseria lactamica ST-640] gi|313005938|emb|CBN87395.1| prolyl-tRNA synthetase [Neisseria lactamica 020-06] Length = 570 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 122/273 (44%), Positives = 171/273 (62%), Gaps = 5/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYQDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIELAPTL 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + + + N K DSL + Sbjct: 240 PLKGERAAAQAELV----KVHTPNVKTIDSLVD 268 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 69/229 (30%), Positives = 111/229 (48%), Gaps = 7/229 (3%) Query: 222 FCSKDFMDFPIPSENTDFDDIISLNSIVEQW----TAPYAATSDVHNEKLFDSLPEN--K 275 F K + DF + + A D+ N D P+ + Sbjct: 341 FAGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEFVDLRNVVEGDESPDGQGR 400 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D Sbjct: 401 LKLARGIEVGHVFQLRDKYTKAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDE 460 Query: 336 KGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KGIIW ++APF++ ++ + R+A +KIYA L G DV DD E+ G Sbjct: 461 KGIIWAKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERAGVLLND 520 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 ++LLG P ++++G + + + VE R + +++ E++ + + Sbjct: 521 SELLGIPHRIVIGDRALKEGNVEYAERRENEAQAVAIGEIVARVTASLN 569 >gi|315641145|ref|ZP_07896224.1| threonine--tRNA ligase [Enterococcus italicus DSM 15952] gi|315483153|gb|EFU73670.1| threonine--tRNA ligase [Enterococcus italicus DSM 15952] Length = 650 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 74/443 (16%), Positives = 159/443 (35%), Gaps = 34/443 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L M+ + G+ WLP G + I +++ Sbjct: 230 FIRMREEAKERDHRKLGKELDLF--MVSKEVGSGLPFWLPKGATIRRIIERYIVDKEVSL 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + + P + +L+ SG +D Y ++M D D M + P + ++++ I Sbjct: 288 GYMHVYTPIMADVNLYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHIMVYKNDIH 347 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + + Sbjct: 348 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKEEFKRTLDLMTA 407 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDI 242 ++ G+ R D T + D + D++ Sbjct: 408 VYKDFGIDDYRFRLS--------------YRDPNNTDKYFDDDKMWENAQKMIKAAMDEL 453 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ F ++ T+ Sbjct: 454 GLDYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERF----ELTY 502 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++ + + + G + + + + +P +AP ++ +I + Sbjct: 503 VGEDGENSHRPVMIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPVQVEIIPVSV--DAHS 559 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + ++ RL + G D E++G + A P Q++VG + ++D+ V I+ Sbjct: 560 EYAYEVKERLLEKGIRAEVDGRNEKMGYKIRAAQTQKIPYQLVVGDQEMNDATVNIRRYG 619 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L ++ N Sbjct: 620 SKETAVEELNMFVDAIVADVQNY 642 >gi|218130015|ref|ZP_03458819.1| hypothetical protein BACEGG_01598 [Bacteroides eggerthii DSM 20697] gi|217987818|gb|EEC54144.1| hypothetical protein BACEGG_01598 [Bacteroides eggerthii DSM 20697] Length = 646 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 76/445 (17%), Positives = 149/445 (33%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L KG+ WLP G + +R Q R Sbjct: 230 EYLVLLEEAKKRDHRKIGKEMDLFM-FSDTVGKGLPMWLPKGAALRIRLQEFLRRIQARY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + L++ SG Y YGK+ + + P + I+++ Sbjct: 289 DYQEVMCPPIGNKLLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F + + ++ Sbjct: 349 RSYKDLPLRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDE-FLRVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + ++ + D + + D + + Sbjct: 408 SIVFQSMHFENFEAQISLR--------------DKVNREKYIGSDENWEKAEQAIIEACE 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + VE A Y D + D++ ++ ++ Sbjct: 454 EKGLKAKVEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFQL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GAD + H + G+M AV+ GK +W + I + Sbjct: 503 EYTGADNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LTPDQVAILPISE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D +++ L + D+ E+IG + ++ P +IVG K + +V ++ Sbjct: 557 KFNDYAQEVKDYLKRYDVRAIVDERNEKIGRKIRDNEMKRIPYMLIVGEKEAENREVSVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M EE + N Sbjct: 617 KQGEGDQGTMKFEEFAKKVNEEVQN 641 >gi|291566329|dbj|BAI88601.1| threonyl-tRNA synthetase [Arthrospira platensis NIES-39] Length = 622 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 73/437 (16%), Positives = 153/437 (35%), Gaps = 38/437 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y+ + RD +L L + I + G+ W P G + + R+ + Sbjct: 213 YWQQKEEAKKRDHRKLGQELDLFS--IQEDAGGGLVFWHPKGSRMRLLIEDYWRQAHLQG 270 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + + LW SG YD Y + M + +++ P + ++SH+ S Sbjct: 271 GYELLYTPHIANLALWKTSGHYDFYRENMFDQIEIENQSYQLKPMNCPFHVLTYQSHLHS 330 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + ++ +R E G+MR R F DA+ F L + + + + Sbjct: 331 YRELPIRWAELGTVYRYERSGVLHGLMRVRGFTQDDAHIFCLPEQVADE-ILGVLNLTEK 389 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I G + + P + + + + Sbjct: 390 ILSDFGFSKYEVNLSTRPSKS-----------------VGNDGVWQLATDALISALNIKG 432 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D+ K+ D++ + S ++ F ++++ A Sbjct: 433 WDYVVDEGGGAFYGPKIDI---KIQDAIARLWQCSTIQVD----FNLPERFNMEYVAA-- 483 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + G++ ++ ++ G +W V + + RD Sbjct: 484 -DGSRQRPIMIHRAIFGSLERFFGILIENYAGDFPLWLAPVMVRVLVV------SDRFRD 536 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + I L + D+ GE++G Q +L P+ V++G + + + + ++ R Sbjct: 537 YAKSIVQSLKQQNIRAEVDNTGERLGKQIRACELEKIPVTVVIGQRELDNQSLSVRTRSR 596 Query: 424 GIREDMSLEEVINYASH 440 G M+L ++ Sbjct: 597 GDIGTMTLPQLTEEILK 613 >gi|71274618|ref|ZP_00650906.1| Prolyl-tRNA synthetase, bacterial [Xylella fastidiosa Dixon] gi|170730883|ref|YP_001776316.1| prolyl-tRNA synthetase [Xylella fastidiosa M12] gi|226701359|sp|B0U4A7|SYP_XYLFM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|71164350|gb|EAO14064.1| Prolyl-tRNA synthetase, bacterial [Xylella fastidiosa Dixon] gi|167965676|gb|ACA12686.1| Proline--tRNA ligase [Xylella fastidiosa M12] Length = 564 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 113/223 (50%), Positives = 151/223 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+R+E Sbjct: 1 MRLSEFHLHTTKEIPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+EM +PT+Q +LW ES R++ +G ++L++ DR Y PT EE +TD R Sbjct: 61 MNRAGAVEMLLPTIQPRELWEESERWEKFGSQLLKIKDRKQAEYCYSPTAEEAVTDYVRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L+ Y M + Sbjct: 121 ELTSYKQLPVNLYQIQTKFRDEIRPRFGVMRAREFVMKDAYSFHLSDADLVREYENMRAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC 223 Y RIF RLGL+ ++A+SG IGGD S EF V+AD+GE + Sbjct: 181 YTRIFTRLGLEFRSVQADSGAIGGDASQEFHVIADSGEDVLAF 223 Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 64/184 (34%), Positives = 95/184 (51%), Gaps = 2/184 (1%) Query: 258 ATSDVHNEKLFD-SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D ++ K ARGIEVGH+F G KY+ M AT GK + MG Sbjct: 380 VVADIRNVIEGDRAVDGGKICIARGIEVGHVFQLGRKYAEAMKATVLDEYGKAVTMTMGC 439 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YGIG R+VAA IE +HD GIIWP +AP+++++ I D V A E + A L Sbjct: 440 YGIGVSRIVAAAIEQNHDVAGIIWPAPIAPWQVAVCVINPKKDPVIIAAAELLLAELQSA 499 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 D DD G + G FA +L+G P +++V + ++ E + R T + E++ ++ Sbjct: 500 DVDTVLDDRGLRPGVMFADMELIGIPHRIVVSERGLAAGTYEYRARRTAMVENLDKTTLL 559 Query: 436 NYAS 439 Sbjct: 560 TRIK 563 >gi|325142550|gb|EGC64950.1| prolyl-tRNA synthetase [Neisseria meningitidis 961-5945] gi|325198486|gb|ADY93942.1| prolyl-tRNA synthetase [Neisseria meningitidis G2136] Length = 570 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 118/235 (50%), Positives = 163/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ S Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIE 234 Score = 159 bits (403), Expect = 7e-37, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 3/196 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A D+ N D P+ + ARGIEVGH+F KY+ M+ +F +GK Sbjct: 374 GRDAAEPEFVDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGK 433 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 ++MG YGIG RVVAA IE ++D KGIIW ++APF++ ++ + R+A +K Sbjct: 434 SQIMEMGCYGIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADK 493 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 IYA L G DV DD E+ G ++LLG P ++++G + + + VE R + Sbjct: 494 IYAELLAAGADVLLDDRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQ 553 Query: 428 DMSLEEVINYASHRFS 443 +++ E++ + + Sbjct: 554 AVAIGEIVARVTASLN 569 >gi|291521022|emb|CBK79315.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Coprococcus catus GD/7] Length = 585 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 78/442 (17%), Positives = 154/442 (34%), Gaps = 34/442 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 L +L+E RD + L M+ +G+ +LP G + I+E++ + G Sbjct: 172 LQLLEEAKERDHRKIGKDMELF--MVDDLVGRGLPMFLPKGYTIWQELENYIKEKERKLG 229 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + + +L+ SG +D Y + M + +D+A + P + I+ + SY Sbjct: 230 YQHVMTPCVGTVNLYKTSGHWDHYKENMFPAMEVDDEAFVLRPMNCPHHMMIYANKRHSY 289 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP +I FR E G+ R R F DA+ +TPE K +++ Sbjct: 290 RDLPIRIGEIAHDFRYEASGTLKGIERGRHFCQNDAH-LFVTPEQIKDEISRVVDLIFST 348 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G+ + D E + + +++ Sbjct: 349 YEDFGITDYRCVLSLRD-----PEDKAKYHDDDEM--------WNKAENALREVMNELGL 395 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y DV + ++ +S ++ F K+ T+ Sbjct: 396 EYTEEIGEAAFYGPKLDV---NVKPAVGNEITLSTCQLD----FCLPAKF----QLTYVD 444 Query: 305 ADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ + +G++ A I + P +AP ++ ++ +K D Sbjct: 445 KDGEMKTPVVLHRAILGSLDRFMAYIL---EETKGNLPTWLAPIQVKVMPVKTDDDDLNA 501 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +I L V DD E++G + + P +++G + V + Sbjct: 502 YANEICELLEAQNVRVDLDDRAEKLGYRMREGQIQKVPYLLVIGFNEKDNRTVSYRLHGE 561 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + L+E + N Sbjct: 562 KDTTVVGLDEFVEKIVDEIKNK 583 >gi|227892831|ref|ZP_04010636.1| theronyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047] gi|227865333|gb|EEJ72754.1| theronyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047] Length = 645 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 80/433 (18%), Positives = 153/433 (35%), Gaps = 34/433 (7%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L L + + G+ W+P G V I + + G + P L Sbjct: 239 RDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYDHVYTPVL 296 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y +M D D M P + IF+ HI+SYR+LP Sbjct: 297 MNLDAYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRVA 356 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + K+ + ++ + Sbjct: 357 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQDE-FAKILKLIMDVYKDFDITD 415 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + F + + + DD+ E Sbjct: 416 YYFRLS-------------YRDPKNTEKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGE 462 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ T+ G DG++H Sbjct: 463 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----GLTYVGQDGEEHRP 511 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 M G + + I + +P +AP + +I + ++ + EK+ L Sbjct: 512 VMIHR--GIVGTMERFIAYLTEIYKGAFPTWLAPIQAEIIPVN--NEAHGEYAEKVRQEL 567 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 +K G DD E++G + + P +++G + KV ++ T SL+ Sbjct: 568 AKRGFRAEVDDRNEKMGYKIRESQTQKVPYTLVLGDDEMKSGKVNVRRYGTDEEISKSLD 627 Query: 433 EVINYASHRFSNN 445 + I + Sbjct: 628 DFIKEIDADVKSY 640 >gi|161870212|ref|YP_001599382.1| prolyl-tRNA synthetase [Neisseria meningitidis 053442] gi|161595765|gb|ABX73425.1| prolyl-tRNA synthetase [Neisseria meningitidis 053442] Length = 599 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 118/235 (50%), Positives = 163/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 30 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 89 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 90 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 149 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ S Sbjct: 150 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDS 209 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 210 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIE 263 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 3/196 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A D+ N D P+ + ARGIEVGH+F KY+ M+ +F +GK Sbjct: 403 GRDAAEPEFVDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTKAMNVSFLDNNGK 462 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 ++MG YGIG RVVAA IE ++D KGIIW ++APF++ ++ + R+A +K Sbjct: 463 SQIMEMGCYGIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADK 522 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 IYA L G DV DD E+ G ++LLG P ++++G + + + VE R + Sbjct: 523 IYAELLAAGADVLLDDRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQ 582 Query: 428 DMSLEEVINYASHRFS 443 +++ E++ + + Sbjct: 583 AVAIGEIVARVTASLN 598 >gi|312884352|ref|ZP_07744060.1| prolyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122] gi|309367982|gb|EFP95526.1| prolyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122] Length = 571 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 116/237 (48%), Positives = 154/237 (64%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPSGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E +P +Q +LW E+GR + G E+LRL DR+D+ + PT EEV+T + R+ Sbjct: 61 INNAGAVETLMPVVQPFELWEETGRSEKMGAELLRLNDRHDRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMRSREF M DAYSFD+ +G + SY M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRSREFSMMDAYSFDIDKDGLQKSYEAMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y R F R+GL P+ A++G IGG+ SHEF VLA++GE + D+ E Sbjct: 181 YCRAFDRMGLNYRPVLADTGAIGGNGSHEFHVLAESGEDLIAF-SSESDYAANIEKA 236 Score = 169 bits (429), Expect = 6e-40, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 110/206 (53%), Gaps = 3/206 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPM 298 D I D+ N D + + RGIEVGHIF G YS M Sbjct: 366 DDKHYFGINWGRDVELGQVEDLRNVVEGDPSPCGQGHLILKRGIEVGHIFQLGKNYSEKM 425 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 + G DGK+ ++MG YGIG RVVAA IE +HD GI PD++APF+++++ + Sbjct: 426 NCGVLGPDGKNTILEMGCYGIGVTRVVAAAIEQNHDKFGISLPDAIAPFQVAIVPMNMHK 485 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + + A E +Y L+ +G +V +DD E+ G F+ +L+G P V++G + + + E Sbjct: 486 SEEVQQAAENLYRELTDLGVEVLFDDRKERPGVMFSDMELIGIPHTVVIGDRSMKEGNFE 545 Query: 418 IKHRLTGIREDMSLEEVINYASHRFS 443 K+R TG +E +++ +++ + ++ + Sbjct: 546 YKNRRTGEKEAIAMADILGHLKNQLA 571 >gi|42526600|ref|NP_971698.1| threonyl-tRNA synthetase [Treponema denticola ATCC 35405] gi|73919840|sp|Q73NR2|SYT_TREDE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|41816793|gb|AAS11579.1| threonyl-tRNA synthetase [Treponema denticola ATCC 35405] Length = 585 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 80/441 (18%), Positives = 157/441 (35%), Gaps = 38/441 (8%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD + L I + + G W P G + +R+ G Sbjct: 174 YLAMLEEAEKRDHRRIGKAMNLF--HIDEENPGQIFWHPKGWTLYLTIQNYVRKRIKEDG 231 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + Y + M + + + P + +IF+ IKSY Sbjct: 232 YLEVHTPFVMPRSLWERSGHWAKYKENMF-ITESEKRLFALKPMNCPGHVEIFKQGIKSY 290 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 ++LP + R+E G+MR R F+ DA+ F + S +K R+ Sbjct: 291 KDLPLRLAEFGSCTRNEPSGSLHGIMRIRGFVQDDAHIFCTEEQISSE-VSKFCALLKRM 349 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + +V T Q D + + D Sbjct: 350 YADFGF---------------AEDKILVKFSTRPEQRVGDDATWDRAEKALSDACADAGL 394 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK- 303 I E A Y + L D+L + ++ + ++A + Sbjct: 395 KYEIAEGEGAFYGPKLEF---TLIDALGREWQCGTIQLDYQLP------SAERLNAEYIG 445 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + K H V + +G++ ++ + G W V + + + Sbjct: 446 DDNNKHHPVMLHRAVLGSLERFIGILIENCAGIMPPWLAPVQAVIVPVAP------AFNE 499 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +K+ L + G V D +++ ++ Q+IVG + ++ V ++ R Sbjct: 500 YAQKVQKVLDEKGFRVIADIGTDRMNAKIRKHQEEKVIYQLIVGQSEMDNNSVAVRMRKG 559 Query: 424 GIREDMSLEEVINYASHRFSN 444 G ++ M+L+E I++ + + Sbjct: 560 G-QKVMTLDEFISFLKDKVDS 579 >gi|319410604|emb|CBY90973.1| prolyl-tRNA synthetase [Neisseria meningitidis WUE 2594] Length = 599 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 164/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 30 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 89 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 90 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 149 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 150 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 209 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL+ P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 210 YCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANVE 263 Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 103/196 (52%), Gaps = 3/196 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A D+ N D P+ + ARGIEVGH+F KY+ M+ +F +GK Sbjct: 403 GRDAAEPEFVDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGK 462 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 ++MG YGIG RVVAA IE ++D KGIIW ++A F++ ++ + R+A +K Sbjct: 463 SQIMEMGCYGIGITRVVAAAIEQNNDEKGIIWTKAMASFEVVIVPMNYKKSDTVREAADK 522 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 IYA L G DV DD E+ G ++LLG P ++++G + + + VE R + Sbjct: 523 IYAELLAAGADVLLDDRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRDNEAQ 582 Query: 428 DMSLEEVINYASHRFS 443 +++ E++ + + Sbjct: 583 AIAIGEIVARVTASLN 598 >gi|304387349|ref|ZP_07369541.1| proline--tRNA ligase [Neisseria meningitidis ATCC 13091] gi|304338600|gb|EFM04718.1| proline--tRNA ligase [Neisseria meningitidis ATCC 13091] Length = 599 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 164/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 30 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 89 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 90 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 149 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 150 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 209 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL+ P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 210 YCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANVE 263 Score = 159 bits (403), Expect = 7e-37, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 3/196 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A D+ N D P+ + ARGIEVGH+F KY+ M+ +F +GK Sbjct: 403 GRDAAEPEFVDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGK 462 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 ++MG YGIG RVVAA IE ++D KGIIW ++APF++ ++ + R+A +K Sbjct: 463 SQIMEMGCYGIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADK 522 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 IYA L G DV DD E+ G ++LLG P ++++G + + + VE R + Sbjct: 523 IYAELLAAGADVLLDDRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQ 582 Query: 428 DMSLEEVINYASHRFS 443 +++ E++ + + Sbjct: 583 AVAIGEIVARVTASLN 598 >gi|227529941|ref|ZP_03959990.1| threonine--tRNA ligase [Lactobacillus vaginalis ATCC 49540] gi|227350126|gb|EEJ40417.1| threonine--tRNA ligase [Lactobacillus vaginalis ATCC 49540] Length = 601 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 71/441 (16%), Positives = 154/441 (34%), Gaps = 36/441 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + RD + ++L L + + G+ W+P G + I + + G Sbjct: 189 KRQEAKERDHRVIGNQLDLF--FVDPKVGAGLPYWMPKGATIRRTIERYIIDREVADGYK 246 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYR 126 + P L + D + SG ++ Y +M D D M P + I++ HI+SYR Sbjct: 247 HVYTPVLMNLDAYKTSGHWEHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYR 306 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ + R E G+ R RE + D ++F + + K+ + ++ Sbjct: 307 DLPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVTLDQIRSE-FAKILRLIMDVY 365 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + R + + + + + DD+ Sbjct: 366 KDFDITDYSFRLSLRD-------------PKNVKKYYANDEMWEKSQSMLKKAMDDLNLD 412 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y D+ + +L ++ +S ++ F ++ T+ G Sbjct: 413 YYEAEGEAAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----GLTYVGQ 461 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DGK+H + +G M A + + G W I ++ + Sbjct: 462 DGKEHQPVMIHRGVVGTMERFIAYLTEIYKGAFPTWLAPEQVH-----IIPVNEDAHGEY 516 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ ++ V D E++G + + P ++VG +++ V ++ Sbjct: 517 ADELAKKMKAANIRVVVDHRNEKMGYKIRESQTQKVPYTLVVGDDEKANNGVSVRKYGEK 576 Query: 425 IREDMSLEEVINYASHRFSNN 445 + +MS + +N ++ Sbjct: 577 EQNEMSQDAFMNEILADIASY 597 >gi|167763511|ref|ZP_02435638.1| hypothetical protein BACSTE_01885 [Bacteroides stercoris ATCC 43183] gi|167698805|gb|EDS15384.1| hypothetical protein BACSTE_01885 [Bacteroides stercoris ATCC 43183] Length = 646 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 149/445 (33%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L KG+ WLP G + +R Q R Sbjct: 230 EYLVLLEEAKKRDHRKIGKEMDLFM-FSDTVGKGLPMWLPKGAALRIRLQEFLRRIQARY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + L++ SG Y YGK+ + + P + I+++ Sbjct: 289 DYQEVMCPPIGNKLLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F + + ++ Sbjct: 349 RSYKDLPLRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDE-FLRVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + ++ + D + + D + + Sbjct: 408 SIVFQSMHFENFEAQISLR--------------DKVNREKYIGSDENWEKAEQAIIEACE 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + VE A Y D + D++ ++ ++ Sbjct: 454 EKGLKARVEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFQL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GAD + H + G+M AV+ GK +W + I + Sbjct: 503 EYTGADNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LTPDQVAILPISE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D +++ L + D+ E+IG + ++ P +IVG K + +V ++ Sbjct: 557 KFNDYAQEVKDYLKRYDVRAIVDERNEKIGRKIRDNEMKRIPYMLIVGEKEAENREVSVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M E+ + N Sbjct: 617 KQGEGDQGTMKFEDFAKKVNEEVQN 641 >gi|294852343|ref|ZP_06793016.1| threonyl-tRNA synthetase [Brucella sp. NVSL 07-0026] gi|294820932|gb|EFG37931.1| threonyl-tRNA synthetase [Brucella sp. NVSL 07-0026] Length = 683 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 152/445 (34%), Gaps = 40/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD ++ L + G+ W G K N+ + +R + Sbjct: 258 QAYLHMLEEAEKRDHRRLGREMDLF--HFQEEGAGVVFWHAKGWKMFQNLVSYMRRRLDS 315 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E++ P + LW SG + Y M ++ +D+ P + IF Sbjct: 316 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 375 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F + + Sbjct: 376 KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLRIN 435 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G + I ++ + P S E A++ V E Sbjct: 436 -DLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVL------------EQI 482 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I+ A Y + L D++ + ++ FG Sbjct: 483 RQQSNNIKTGILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------ 533 Query: 298 MSATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G K V + G+M ++ + G +W V ++ Sbjct: 534 --AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATIT---- 587 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + ++ A+L G V D E+I + L P+ ++ G + + V Sbjct: 588 --SDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHSLQKVPVILVCGKREAEEKTV 645 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + +E M+L+E I Sbjct: 646 NMRRLGSRDQESMTLDEAIARLCEE 670 >gi|325136158|gb|EGC58766.1| prolyl-tRNA synthetase [Neisseria meningitidis M0579] Length = 599 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 163/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 30 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 89 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 90 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 149 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 150 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 209 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 210 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIE 263 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 3/196 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A D+ N D P+ + ARGIEVGH+F KY+ M+ +F +GK Sbjct: 403 GRDAAEPEFVDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGK 462 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 ++MG YGIG RVVAA IE ++D KGIIW ++APF++ ++ + R+A +K Sbjct: 463 SQIMEMGCYGIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADK 522 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 IYA L G DV DD E+ G ++LLG P ++++G + + + VE R + Sbjct: 523 IYAELLAAGADVLLDDRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQ 582 Query: 428 DMSLEEVINYASHRFS 443 +++ E++ + + Sbjct: 583 AVAIGEIVARVTALLN 598 >gi|325132465|gb|EGC55158.1| prolyl-tRNA synthetase [Neisseria meningitidis M6190] Length = 599 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 163/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 30 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 89 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 90 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 149 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 150 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 209 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 210 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIE 263 Score = 160 bits (404), Expect = 5e-37, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 3/196 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A D+ N D P+ + ARGIEVGH+F KY+ M+ +F +GK Sbjct: 403 GRDAAEPEFVDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGK 462 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 ++MG YGIG RVVAA IE ++D KGIIW ++APF++ ++ + R+A +K Sbjct: 463 SQIMEMGCYGIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDAVREAADK 522 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 IYA L G DV DD E+ G ++LLG P ++++G + + + VE R + Sbjct: 523 IYAELLAAGADVLLDDRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQ 582 Query: 428 DMSLEEVINYASHRFS 443 +++ E++ + + Sbjct: 583 AVAIGEIVARVTASLN 598 >gi|254673039|emb|CBA07634.1| Prolyl-tRNA synthetase [Neisseria meningitidis alpha275] Length = 599 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 163/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 30 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 89 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 90 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 149 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 150 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 209 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 210 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIE 263 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 3/196 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A D+ N D P+ + ARGIEVGH+F KY+ M+ +F +GK Sbjct: 403 GRDAAEPEFVDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTKAMNVSFLDNNGK 462 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 ++MG YGIG RVVAA IE ++D KGIIW ++APF++ ++ + R+A +K Sbjct: 463 SQIMEMGCYGIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADK 522 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 IYA L G DV DD E+ G ++LLG P ++++G + + + VE R + Sbjct: 523 IYAELLAAGADVLLDDRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQ 582 Query: 428 DMSLEEVINYASHRFS 443 +++ E++ + + Sbjct: 583 AVAIGEIVARVTASLN 598 >gi|317476770|ref|ZP_07936013.1| threonyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA] gi|316906945|gb|EFV28656.1| threonyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA] Length = 646 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 76/445 (17%), Positives = 149/445 (33%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L KG+ WLP G + +R Q R Sbjct: 230 EYLVLLEEAKKRDHRKIGKEMDLFM-FSDTVGKGLPMWLPKGAALRIRLQEFLRRIQARY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + L++ SG Y YGK+ + + P + I+++ Sbjct: 289 DYQEVMCPPIGNKLLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F + + ++ Sbjct: 349 RSYKDLPLRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDE-FLRVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + ++ + D + + D + + Sbjct: 408 SIVFQSMHFENFEAQISLR--------------DKVNREKYIGSDENWEKAEQAIIEACE 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + VE A Y D + D++ ++ ++ Sbjct: 454 EKGLKAKVEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFQL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GAD + H + G+M AV+ GK +W + I + Sbjct: 503 EYTGADNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LTPDQVAILPISE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D +++ L + D+ E+IG + ++ P +IVG K + +V ++ Sbjct: 557 KFNDYAQEVKDYLKRYDVRAIVDERNEKIGRKIRDNEMKRIPYMLIVGEKEAENREVSVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M EE + N Sbjct: 617 KQGEGDQGTMKFEEFAKKVNEEVQN 641 >gi|153802043|ref|ZP_01956629.1| prolyl-tRNA synthetase [Vibrio cholerae MZO-3] gi|124122402|gb|EAY41145.1| prolyl-tRNA synthetase [Vibrio cholerae MZO-3] Length = 571 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 115/237 (48%), Positives = 154/237 (64%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M V+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYEAMHVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL P+ A++G IGG+ SHEF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 174 bits (440), Expect = 4e-41, Method: Composition-based stats. Identities = 68/190 (35%), Positives = 111/190 (58%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N D + + RGIEVGHIF GT YS M+ ++GK+ ++M Sbjct: 382 GKVEDLRNVVEGDPSPCGKGTLMLKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVAA IE +HD GIIWPD++APF+++++ + + + A EK+YA L+ Sbjct: 442 GCYGIGVSRVVAAAIEQNHDDYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G +V +DD E+ G F+ +L+G P +I+G + + + E K+R G +E +++E Sbjct: 502 AAGIEVLFDDRKERPGVMFSDMELIGVPHTIIIGDRSMDEGHFEYKNRRQGEKEAVAMES 561 Query: 434 VINYASHRFS 443 +I++ + + Sbjct: 562 IIDFIQAKLA 571 >gi|229523326|ref|ZP_04412733.1| prolyl-tRNA synthetase [Vibrio cholerae TM 11079-80] gi|229339689|gb|EEO04704.1| prolyl-tRNA synthetase [Vibrio cholerae TM 11079-80] Length = 571 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 114/237 (48%), Positives = 153/237 (64%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M V+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKTGLEKSYEAMHVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL P+ A++G IGG+ SHEF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 67/190 (35%), Positives = 111/190 (58%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N D + + RGIEVGHIF GT YS M+ ++GK+ ++M Sbjct: 382 GKVEDLRNVVEGDPSPCGKGTLMLKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVAA IE +HD GIIWPD++APF+++++ + + + A EK+YA L+ Sbjct: 442 GCYGIGVSRVVAAAIEQNHDDYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G +V +DD E+ G F+ +L+G P +I+G + + + E K+R +G +E +++ Sbjct: 502 AAGIEVLFDDRKERPGVMFSDMELIGVPHTIIIGDRSMDEGHFEYKNRRSGEKEAVAMAS 561 Query: 434 VINYASHRFS 443 +I++ + + Sbjct: 562 IIDFIQAKLA 571 >gi|206972654|ref|ZP_03233595.1| prolyl-tRNA synthetase [Bacillus cereus AH1134] gi|206732411|gb|EDZ49592.1| prolyl-tRNA synthetase [Bacillus cereus AH1134] Length = 566 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 122/267 (45%), Positives = 168/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + + E+ A E++ Sbjct: 240 ATYTKSDVAEKALEKVATPDQKAIEEV 266 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|304403794|ref|ZP_07385456.1| threonyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] gi|304346772|gb|EFM12604.1| threonyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] Length = 637 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 76/422 (18%), Positives = 141/422 (33%), Gaps = 39/422 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 I + RD +L L M + + G+ +LP G + + + RE Q Sbjct: 235 LHRIEEAKKRDHRKLGKELGLF--MFSEEAPGMPFYLPKGMAIRNELESFAREIQRLRAY 292 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + + +W +SG +D Y M ++ P + I+++ SYR Sbjct: 293 AEVRTPLMMNNRIWEQSGHWDHYKDNM-YFTQVDETKFALKPMNCPGHMLIYKNSRHSYR 351 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP + R E G+MR R F DA+ F L + + + + + Sbjct: 352 ELPIRLSEFGQVHRHEFSGALSGMMRVRTFCQDDAHLFVLPSQIEEE--IGLVIELIGHI 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + + + + + P ++ D S + D Sbjct: 410 YDVFGFAYKIELSTRP-----------------DDYMGAEALWDQAEQSLQSVLDARGIA 452 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 +I E A Y D H + D+L + + ++ F K+ T+ G Sbjct: 453 YTINEGDGAFYGPKIDFH---ILDALQRSWQCGTIQLD----FQMPEKFD----LTYIGE 501 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 D H + + + I + +P +AP + L+ + D Sbjct: 502 DNLKHRPVVIHRAV--YGSIDRFIGILTEHYAGAFPLWLAPVQAKLLPV---SDQYLDDA 556 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 + +L + G DD E++G + A L P +I+G V ++ R Sbjct: 557 YAVKKQLEEAGIRAEVDDRNEKLGYKIREAQLEKTPYMLILGENERGSGSVSVRKRSGEE 616 Query: 426 RE 427 Sbjct: 617 LG 618 >gi|301055309|ref|YP_003793520.1| prolyl-tRNA synthetase [Bacillus anthracis CI] gi|300377478|gb|ADK06382.1| prolyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI] Length = 566 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 122/267 (45%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKELEKVATPDQKAIEEV 266 Score = 166 bits (419), Expect = 8e-39, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|325205891|gb|ADZ01344.1| prolyl-tRNA synthetase [Neisseria meningitidis M04-240196] Length = 570 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 163/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANVE 234 Score = 159 bits (403), Expect = 7e-37, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 3/196 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A D+ N D P+ + ARGIEVGH+F KY+ M+ +F +GK Sbjct: 374 GRDAAEPEFVDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGK 433 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 ++MG YGIG RVVAA IE ++D KGIIW ++APF++ ++ + R+A +K Sbjct: 434 SQVMEMGCYGIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADK 493 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 IYA L G DV DD E+ G ++LLG P ++++G + + + VE R + Sbjct: 494 IYAELLAAGADVLLDDRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQ 553 Query: 428 DMSLEEVINYASHRFS 443 +++ E++ + + Sbjct: 554 AVAIGEIVARVTASLN 569 >gi|325144523|gb|EGC66822.1| prolyl-tRNA synthetase [Neisseria meningitidis M01-240013] gi|325208298|gb|ADZ03750.1| prolyl-tRNA synthetase [Neisseria meningitidis NZ-05/33] Length = 599 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 163/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 30 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 89 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 90 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 149 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 150 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 209 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 210 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANVE 263 Score = 159 bits (403), Expect = 7e-37, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 3/196 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A D+ N D P+ + ARGIEVGH+F KY+ M+ +F +GK Sbjct: 403 GRDAAEPEFVDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGK 462 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 ++MG YGIG RVVAA IE ++D KGIIW ++APF++ ++ + R+A +K Sbjct: 463 SQVMEMGCYGIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADK 522 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 IYA L G DV DD E+ G ++LLG P ++++G + + + VE R + Sbjct: 523 IYAELLAAGADVLLDDRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQ 582 Query: 428 DMSLEEVINYASHRFS 443 +++ E++ + + Sbjct: 583 AVAIGEIVARVTASLN 598 >gi|89075398|ref|ZP_01161815.1| prolyl-tRNA synthetase [Photobacterium sp. SKA34] gi|89048814|gb|EAR54384.1| prolyl-tRNA synthetase [Photobacterium sp. SKA34] Length = 571 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 121/278 (43%), Positives = 165/278 (59%), Gaps = 5/278 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAEI SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEIISHQLMLRAGMIRKLASGLYAWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+ + + PT EEV T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHARPFVLSPTAEEVFTSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY+ M + Sbjct: 121 EVNSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKEGLQKSYDAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAF-STESDYAANIEKA--- 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS 278 + ++ + T + D N K D L E ++ Sbjct: 237 EALAPAHNNAEPTVELSV-IDTPNAKTIDELVEQHGIA 273 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 70/190 (36%), Positives = 113/190 (59%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFD--SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N D + RGIEVGHIF G YS M+ A+GK+ ++M Sbjct: 382 GRVEDLRNVVEGDLSPCGKGTLQLKRGIEVGHIFQLGNAYSEKMNCGVLDANGKNAILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVA+ IE +HD GIIWPD++APF +S++ + + ++A EK+YA L+ Sbjct: 442 GCYGIGVSRVVASAIEQNHDENGIIWPDALAPFHVSIVPMNMAKSEEVKEAAEKLYADLT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G +V +DD E+ G FA +LLG P +++G++ + + ++E K+R TGI+E +++ + Sbjct: 502 AAGIEVLFDDRKERPGVMFADHELLGIPHTIVIGNRSLENGEMEYKNRRTGIKEAVAVND 561 Query: 434 VINYASHRFS 443 V+ + + + Sbjct: 562 VVTFLKQKMA 571 >gi|89098602|ref|ZP_01171484.1| prolyl-tRNA synthetase [Bacillus sp. NRRL B-14911] gi|89086564|gb|EAR65683.1| prolyl-tRNA synthetase [Bacillus sp. NRRL B-14911] Length = 568 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 115/252 (45%), Positives = 163/252 (64%), Gaps = 1/252 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S +P L+E P DAE+ SH+L+LR G I Q++ G+YS+LP+ +K L + AI+REE Sbjct: 1 MKQSMTLIPTLREVPADAEVRSHQLLLRAGFIRQNAAGVYSYLPMARKVLQKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P LQ A+LW ESGR+ +YG E++RL DRND+ G THEEV+T + R Sbjct: 61 MDDAGASELLMPALQQAELWQESGRWYTYGPELMRLKDRNDREFALGATHEEVITSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF + E Y+++F + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEQRPRFGILRGREFIMKDAYSFHSSQESLDEVYSRLFTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFTRCGLNFRAVIADSGAMGGKDTHEFMVLSDIGEDTIAYSD-ASDYAANVEMAPVI 239 Query: 241 DIISLNSIVEQW 252 + + + + Sbjct: 240 NAYAKSDAAPKE 251 Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 66/193 (34%), Positives = 111/193 (57%), Gaps = 3/193 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ A+GIEVGH+F GT+YS M+A + +G+ + Sbjct: 377 VSQFADLRFIQEGDLSPDGNGKILFAKGIEVGHVFKLGTRYSEAMNAVYLDENGRTQPMI 436 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R++AA+ E +D KG IWP +APFK+ +I + D+ E++Y L Sbjct: 437 MGCYGIGVSRILAAIAEQYNDDKGFIWPADLAPFKVHVIAVNMKDEAQAGLGEELYKELR 496 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G +V +DD E+ G +FA ADL+G P+++ G K S+ VE+K R TG E++ ++ Sbjct: 497 GNGYEVLFDDRPERAGVKFADADLIGLPVRITAGKK-ASEGIVEVKVRSTGEMEEIHKDQ 555 Query: 434 VINYASHRFSNNR 446 ++ + + ++ + Sbjct: 556 LLEHIASILTSQK 568 >gi|308389457|gb|ADO31777.1| prolyl-tRNA synthetase [Neisseria meningitidis alpha710] gi|325130423|gb|EGC53187.1| prolyl-tRNA synthetase [Neisseria meningitidis OX99.30304] gi|325201951|gb|ADY97405.1| prolyl-tRNA synthetase [Neisseria meningitidis M01-240149] Length = 570 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 163/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIE 234 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 3/196 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A D+ N D P+ + ARGIEVGH+F KY+ M+ +F +GK Sbjct: 374 GRDAAEPEFVDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGK 433 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 ++MG YGIG RVVAA IE ++D KGIIW ++APF++ ++ + R+A +K Sbjct: 434 SQIMEMGCYGIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADK 493 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 IYA L G DV DD E+ G ++LLG P ++++G + + + VE R + Sbjct: 494 IYAELLAAGADVLLDDRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQ 553 Query: 428 DMSLEEVINYASHRFS 443 +++ E++ + + Sbjct: 554 AVAIGEIVARVTALLN 569 >gi|261253697|ref|ZP_05946270.1| prolyl-tRNA synthetase [Vibrio orientalis CIP 102891] gi|260937088|gb|EEX93077.1| prolyl-tRNA synthetase [Vibrio orientalis CIP 102891] Length = 571 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 111/237 (46%), Positives = 150/237 (63%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHTRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKSGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 173 bits (439), Expect = 5e-41, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 111/206 (53%), Gaps = 3/206 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPM 298 D I D+ N D + RGIEVGHIF G YS M Sbjct: 366 DDKHYFGINWGRDVELGQVEDLRNVVEGDPSPCGQGTLQLKRGIEVGHIFQLGNTYSQAM 425 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 + G DGK+ ++MG YGIG RVVA+ IE +HD GIIWPD++APF+++++ + Sbjct: 426 NCGVLGPDGKNVILEMGCYGIGVSRVVASAIEQNHDKYGIIWPDALAPFQVAIVPMNMHK 485 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + ++A EK+YA L+ +G +V +DD E+ G F+ +L+G P +++G + + + E Sbjct: 486 SEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFSDMELIGIPHTIVIGDRSMKEGNFE 545 Query: 418 IKHRLTGIREDMSLEEVINYASHRFS 443 K+R G + +++ +++ + + + Sbjct: 546 YKNRRNGEKTAVAMADIVEHIKAQLA 571 >gi|90580993|ref|ZP_01236794.1| prolyl-tRNA synthetase [Vibrio angustum S14] gi|90437871|gb|EAS63061.1| prolyl-tRNA synthetase [Vibrio angustum S14] Length = 571 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 119/277 (42%), Positives = 164/277 (59%), Gaps = 5/277 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHTRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY+ M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKEGLQKSYDAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN---- 236 Y + F R+GL+ P+ A+SG IGG+ S EF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLEYRPVWADSGAIGGNGSQEFHVLAESGEDLIAF-STESDYAANIEKAEAL 239 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + P A T D E+ ++ + Sbjct: 240 APAHDRAEPTIELSVIDTPNAKTIDELVEQHGIAIEK 276 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 70/190 (36%), Positives = 114/190 (60%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N D + + RGIEVGHIF G YS M+ A+GK+ ++M Sbjct: 382 GRVEDLRNVVEGDPSPCGQGTLMLKRGIEVGHIFQLGNAYSEKMNCGVLDANGKNTILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVA+ IE +HD GIIWPD++APF +S++ + + ++A EK+YA L+ Sbjct: 442 GCYGIGVSRVVASAIEQNHDENGIIWPDALAPFHVSIVPMNMAKSEEVKEAAEKLYADLT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G +V +DD E+ G FA +LLG P +++G++ + + ++E K+R TGI+E +++ + Sbjct: 502 AAGIEVLFDDRKERPGVMFADHELLGVPHTIVIGNRSLENGEMEYKNRRTGIKEAVAVND 561 Query: 434 VINYASHRFS 443 V+ + + + Sbjct: 562 VVAFLKQKMA 571 >gi|224370824|ref|YP_002604988.1| threonyl-tRNA synthetase [Desulfobacterium autotrophicum HRM2] gi|259516390|sp|C0QAP1|SYT_DESAH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|223693541|gb|ACN16824.1| ThrS2 [Desulfobacterium autotrophicum HRM2] Length = 636 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 85/445 (19%), Positives = 160/445 (35%), Gaps = 42/445 (9%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +++E RD ++ L + HQ + G+ + G + + + A R+E Sbjct: 225 KAYLHLIEEAKKRDHRKIGTRMGLFS--FHQEAAGMPFFHAKGMEMWNELLAYWRDEHRA 282 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G +E P + S LW +SG +++Y + M + + P + ++++ Sbjct: 283 AGYVETKTPVMMSRHLWEKSGHWENYRENMYTSV-VDGEEYAIKPMNCPGGMLLYKTESH 341 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP +I L R EL G+ R R F DA+ F +TPE + + Sbjct: 342 SYRDLPLRAGEIGLVHRHELSGALSGLFRVRAFHQDDAHIF-MTPEQIESEILGVLELVE 400 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RI+ R GL F + T + S + D Sbjct: 401 RIYSRFGLG------------------FHLELSTRPKKSIGSDEQWAEATNGLKNALDKY 442 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 +I E A Y D+H + D+L + +++ T+ Sbjct: 443 GQPYAINEGDGAFYGPKIDIH---IKDALGRTWQCGTVQLDMALP--------ERFDLTY 491 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 KGAD + H + G++ ++ + +P +AP + ++ I Sbjct: 492 KGADNEKHRPIMIHRVIYGSIERFFGILV---EHFAGKFPLWLAPVQAVVLPIN---DDL 545 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D + + L G D E + + A + PL + +G K + ++ Sbjct: 546 ADHAQTVKKELESNGIRCDVDLRTESLKKKIREAQVNYVPLIITIGEKEKESGTLSVRTL 605 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 +R +S+ + I + Sbjct: 606 DGKVRMGLSMADFIPPVLAHIRARQ 630 >gi|218235963|ref|YP_002368620.1| prolyl-tRNA synthetase [Bacillus cereus B4264] gi|226731428|sp|B7HDU2|SYP_BACC4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|218163920|gb|ACK63912.1| proline--tRNA ligase [Bacillus cereus B4264] Length = 566 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 122/267 (45%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKALEKVATPDQKAIEEV 266 Score = 166 bits (419), Expect = 9e-39, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 108/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++++EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVNVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|170744367|ref|YP_001773022.1| threonyl-tRNA synthetase [Methylobacterium sp. 4-46] gi|168198641|gb|ACA20588.1| threonyl-tRNA synthetase [Methylobacterium sp. 4-46] Length = 670 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 77/438 (17%), Positives = 142/438 (32%), Gaps = 35/438 (7%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E R D ++ L + G+ W P G + A +R + Sbjct: 232 YLHRLEEAERRDHRRLGREMDLF--HFQEEGPGVVFWHPKGWTLFQELIAYMRRRL-KAD 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E++ P + LW SG +D Y + M +++ P + IF+ +KSY Sbjct: 289 YREVNAPQILDKALWETSGHWDWYRENMFVTKTEDERVFAIKPMNCPGHVQIFKHGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R E G+MR R F DA+ F + + L Sbjct: 349 RDLPLRLAEFGAVSRYEPSGALHGLMRVRAFTQDDAHVFCTEAQLAAECLKIN-DLILST 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ + P S A+ T+V SE + Sbjct: 408 YADFGFDEIVVKLSTRPEKRVGSDALWDHAEAVMTRVL-----------SEIEEQSGGRI 456 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 +I A Y + L D++ + + ++ FG A + Sbjct: 457 RTAINPGEGAFYGPKFEY---VLRDAIGRDWQCGTTQVDFNLPERFG--------AFYVD 505 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ + G+M A ++ G +W + ++ Sbjct: 506 ADGQKKTPVMVHRAICGSMERFAGILIEHFAGHFPLWLAPLQVVVATIT------SDADP 559 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + A G D E+I + P+ ++VG + + V I+ + Sbjct: 560 YASDVLAACEAAGLRAEIDLRNEKINYKVREHSHAKVPVMLVVGRREGEERTVSIRRLGS 619 Query: 424 GIREDMSLEEVINYASHR 441 + L++ + Sbjct: 620 QQTRTLPLDQALADLVGE 637 >gi|153216557|ref|ZP_01950520.1| prolyl-tRNA synthetase [Vibrio cholerae 1587] gi|153830554|ref|ZP_01983221.1| prolyl-tRNA synthetase [Vibrio cholerae 623-39] gi|124114232|gb|EAY33052.1| prolyl-tRNA synthetase [Vibrio cholerae 1587] gi|148873952|gb|EDL72087.1| prolyl-tRNA synthetase [Vibrio cholerae 623-39] Length = 571 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 114/237 (48%), Positives = 153/237 (64%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M V+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYEAMHVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL P+ A++G IGG+ SHEF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 67/190 (35%), Positives = 111/190 (58%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N D + + RGIEVGHIF GT YS M+ ++GK+ ++M Sbjct: 382 GKVEDLRNVVEGDPSPCGKGTLMLKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVAA IE +HD GIIWPD++APF+++++ + + + A EK+YA L+ Sbjct: 442 GCYGIGVSRVVAAAIEQNHDDYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G +V +DD E+ G F+ +L+G P +I+G + + + E K+R +G +E +++ Sbjct: 502 AAGIEVLFDDRKERPGVMFSDMELIGVPHTIIIGDRSMDEGHFEYKNRRSGEKEAVAMAS 561 Query: 434 VINYASHRFS 443 +I++ + + Sbjct: 562 IIDFIQAKLA 571 >gi|325204335|gb|ADY99788.1| prolyl-tRNA synthetase [Neisseria meningitidis M01-240355] Length = 570 Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats. Identities = 116/235 (49%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ Y KE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYXKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIE 234 Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 3/196 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A D+ N D P+ + ARGIEVGH+F KY+ M+ +F +GK Sbjct: 374 GRDAAEPEFVDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTKAMNVSFLDNNGK 433 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 ++MG YGIG RVVAA IE ++D KGIIW ++APF++ ++ + R+A +K Sbjct: 434 SQIMEMGCYGIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADK 493 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 IYA L G DV DD E+ G ++LLG P ++++G + + + VE R + Sbjct: 494 IYAELLAAGADVLLDDRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQ 553 Query: 428 DMSLEEVINYASHRFS 443 +++ E++ + + Sbjct: 554 AVAIGEIVARVTASLN 569 >gi|238922273|ref|YP_002935787.1| threonyl-tRNA synthetase [Eubacterium eligens ATCC 27750] gi|238873945|gb|ACR73653.1| threonyl-tRNA synthetase [Eubacterium eligens ATCC 27750] Length = 591 Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats. Identities = 73/437 (16%), Positives = 157/437 (35%), Gaps = 33/437 (7%) Query: 13 ENPRDAEIASHKLMLRTGMIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 RD ++ L M +G+ +LP G + I++++ + G + + Sbjct: 178 AKERDHRKIGKEMELF--MSDDLIGRGLPMFLPKGYTVWQELENYIKDKERKLGYLHVMT 235 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + + +L+ SG +D Y + M + ++ + P + I+ + + SY++LP Sbjct: 236 PCVGTVNLYKTSGHWDHYKENMFPAMEVEGESFVLRPMNCPHHMMIYANKMHSYKDLPIR 295 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 +I FR E G+ R R F DA+ +TPE + + K+ + + Sbjct: 296 IGEIAHDFRFEASGTLKGIERGRHFCQNDAH-LFVTPEQIESEFAKVVDLIFETYKDFNI 354 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + + D E + + +DI + Sbjct: 355 TDYRCVLSLRD-----PEDKVKYHDDDEM--------WNNAENALRKVLNDIGIEYTEEI 401 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y DV + ++ +S ++ F +K+ + T+ DG+ Sbjct: 402 GEAAFYGPKLDV---NVKPAIGNEYTLSTCQLD----FCLPSKF----NLTYIDKDGQRK 450 Query: 311 YVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + +G++ A I + P +AP + +++ +K D+ +Y Sbjct: 451 TPVVLHRAILGSLDRFMAYIL---EETKGNLPLWLAPVQATILPVKNEDEELNAYAHGLY 507 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 L+ G V D+ E++G + A + P +++G +D V + + Sbjct: 508 DYLADNGIRVEIDERAEKLGYRVREAQVKKIPYLIVLGKNEAADGTVSYRLHGEQKSTTV 567 Query: 430 SLEEVINYASHRFSNNR 446 S +E + + + Sbjct: 568 SKDEFVAMLKDEIATKK 584 >gi|304389414|ref|ZP_07371377.1| threonine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304327224|gb|EFL94459.1| threonine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 669 Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats. Identities = 64/457 (14%), Positives = 135/457 (29%), Gaps = 47/457 (10%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y + + RD ++L L + + G+ + P G + R Sbjct: 245 LKEYVTRMAEAAKRDHRRLGNELDLFS-FPEEIGSGLAVFHPKGAMVRMEMENYSRRRHL 303 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTH 110 G + P + L+ SG + Y M + P + Sbjct: 304 EEGYSFVYTPHVTKGQLFETSGHLEWYKDGMFPPMRVDEECDDQGNVTKEGFDYYLKPMN 363 Query: 111 EEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEG 169 + I++S +SYR LP ++ +R E G+ R R F D++ + + Sbjct: 364 CPMHNLIYKSRSRSYRELPLRLFEFGTVYRYEKSGVVHGLTRGRGFTQDDSHIYCTREQM 423 Query: 170 SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMD 229 + L + GL + + + S + + Sbjct: 424 KDELTK-LLTFVLDLLKDYGLDDFYLELST----------------KNPHKFVGSDEIWE 466 Query: 230 FPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY 289 + + A Y + + D++ ++S ++ F Sbjct: 467 EATNTLAEVATASGLELVPDPEGAAFYGPKI---SVQARDAIGRTWQMSTIQLD----FN 519 Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 ++ L +A + V + G++ V+ + G W Sbjct: 520 LPERFDLEYTAA---DGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAW------LAP 570 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 + + + D CE I RL V D ++ G + A P +I G + Sbjct: 571 VQVRLVPVAEAFNDYCEDIANRLRAENVRVEVDTTDDRFGKKIRNAAKDKIPFTLIAGGE 630 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 + V ++R + + +++ I + R Sbjct: 631 DAEANAVSFRYRGGEQKNGVPIDQAIAEILEVIRSRR 667 >gi|115375454|ref|ZP_01462714.1| threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] gi|115367497|gb|EAU66472.1| threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] Length = 616 Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats. Identities = 74/441 (16%), Positives = 131/441 (29%), Gaps = 42/441 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L H + G W P G ++ +R T Sbjct: 210 EYLTRIEESKKRDHRKLGKELDLF--HFHPFAPGSAFWSPKGTTLYQTLSQWMRRLTAET 267 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRN--DKAMIYGPTHEEVMTDIFRSHI 122 G +E+ P + + LW SG + Y + M + D + P + F Sbjct: 268 GYVEIKTPLMFNKGLWEASGHWGKYKENMFLVLDNESGEHDFSLKPMNCPSHHLYFGFKR 327 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+LP + + R+E G+ R R+F DA+ + + + FV Sbjct: 328 HSYRDLPLRLHTQDVLHRNEAAGSLGGLTRVRQFAQDDAHIYCTEDQIGDE--VRRFVKL 385 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L + + + P D + Sbjct: 386 LDHVYNAVGLKYSAKFSTRPEQR-----------------LGEDALWDRAESALEGVLKT 428 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + A Y D + DS+ R ++G I + Sbjct: 429 LGVPYEVKPGEGAFYGPKIDFD---VSDSIG-------RKWQLGTI-QLDYLAAQRFDLK 477 Query: 302 FKGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G D +H + G+ A++ G W + Sbjct: 478 YIGEDNAEHRPVVLHRAIYGSFERFIAILIEHFAGAFPAW------LAPIQAVLVTVADR 531 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D K+ +L G V DD G+ + ++ + P +++G V V + Sbjct: 532 QLDYARKVRDQLRAKGFRVELDDRGQSLNAKIREWQIQKLPFTLVIGDNEVEAGGVAPRR 591 Query: 421 RLTGIREDMSLEEVINYASHR 441 + M LE+ S Sbjct: 592 YGGEDLKSMKLEDFEALLSKE 612 >gi|281203096|gb|EFA77297.1| threonyl-tRNA synthetase [Polysphondylium pallidum PN500] Length = 716 Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats. Identities = 80/437 (18%), Positives = 152/437 (34%), Gaps = 40/437 (9%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD L H +S G +LP G + + + IR E +R G E+ Sbjct: 316 MKEAALRDHRNVGKNQELF--FFHPYSPGCAFFLPHGTRIYNRLVEFIRHEYHRRGFTEV 373 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 PT+ S LW ESG + YG+ M L +D+ P + +F + +SYR LP Sbjct: 374 ITPTMFSQQLWEESGHWAKYGENMFNLK-CDDQNYSLKPMNCPSHCLMFGNRSRSYRELP 432 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 F + R+EL G+ R R+F DA+ F TP+ + + ++ Sbjct: 433 IRFADFGVLHRNELAGALTGLTRVRKFQQDDAHIFC-TPDMVEQEISSCLEFMQHVYGIF 491 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 G EF + T + D S + + Sbjct: 492 G------------------FEFQLELSTRPDNHLGTAAQWDVAENSLRDALNKFGKPWKL 533 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A Y D+ ++FD L + + ++ F ++ L + + Sbjct: 534 NPGDGAFYGPKIDI---QIFDVLKRAHQCATIQLD----FQLPIRFELEYMGSGPEERHR 586 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + G R++A +IE + + D + + Sbjct: 587 PVIIHRAILGS-VERMMAILIEHTAGKWPFWVSPRQVLVATV-------SEKFADYAKSV 638 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 L+ G D + + + A L + ++VG + ++++ V ++ R +R Sbjct: 639 TKTLTDAGFYADVDLSDKTLPKKVREAQLSQYNYILVVGEEELNNNTVNVRTRDNVVRGS 698 Query: 429 MSLEEVINYASHRFSNN 445 ++++ +I +N Sbjct: 699 ITVDALIEEFK--LNNK 713 >gi|254805135|ref|YP_003083356.1| Prolyl-tRNA synthetase [Neisseria meningitidis alpha14] gi|254668677|emb|CBA06388.1| Prolyl-tRNA synthetase [Neisseria meningitidis alpha14] Length = 570 Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 163/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIE 234 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 3/196 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A D+ N D P+ + ARGIEVGH+F KY+ M+ +F +GK Sbjct: 374 GRDAAEPEFVDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGK 433 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 ++MG YGIG RVVAA IE ++D KGIIW ++APF++ ++ + R+A +K Sbjct: 434 SQIMEMGCYGIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADK 493 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 IYA L G DV DD E+ G ++LLG P ++++G + + + VE R + Sbjct: 494 IYAELLAAGADVLLDDRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQ 553 Query: 428 DMSLEEVINYASHRFS 443 +++ E++ + + Sbjct: 554 AVAIGEIVARVTALLN 569 >gi|269214916|ref|ZP_05987412.2| proline--tRNA ligase [Neisseria lactamica ATCC 23970] gi|269208774|gb|EEZ75229.1| proline--tRNA ligase [Neisseria lactamica ATCC 23970] Length = 625 Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats. Identities = 121/273 (44%), Positives = 170/273 (62%), Gaps = 5/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 56 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 115 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR+ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 116 MARAGSVELLMPVVQPAELWQESGRWKFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 175 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 176 EVNSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYQDMYDA 235 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 236 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIELAPTL 294 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + + + N K DSL + Sbjct: 295 PLKGERAAAQAELV----KVHTPNVKTIDSLVD 323 Score = 160 bits (404), Expect = 5e-37, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 3/196 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A D+ N D P+ + ARGIEVGH+F KY+ M+ +F +GK Sbjct: 429 GRDAAEPEFVDLRNVVEGDESPDGQARLKLARGIEVGHVFQLRDKYTKAMNVSFLDNNGK 488 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 ++MG YGIG RVVAA IE ++D KGIIW ++APF++ ++ + R+A +K Sbjct: 489 SQIMEMGCYGIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADK 548 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 IYA L G DV DD E+ G ++LLG P ++++G + + + VE R + Sbjct: 549 IYAELLAAGADVLLDDRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRENEAQ 608 Query: 428 DMSLEEVINYASHRFS 443 +++ E++ + + Sbjct: 609 AVAIGEIVARVTASLN 624 >gi|261392382|emb|CAX49924.1| prolyl-tRNA synthetase (proline--tRNA ligase; ProRS; global RNA synthesis factor) [Neisseria meningitidis 8013] Length = 570 Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 163/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANVE 234 Score = 156 bits (395), Expect = 6e-36, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 105/196 (53%), Gaps = 3/196 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A D+ N D P+ + ARGIEVGH+F KY+ M+ +F +GK Sbjct: 374 GRDAAEPEFVDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGK 433 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 ++MG YGIG RVVAA IE ++D KGIIW ++APF++ ++ + R+A +K Sbjct: 434 SQIMEMGCYGIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADK 493 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 IYA L G DV DD E+ G ++LLG P ++++G + + +S VE R + Sbjct: 494 IYAELLAAGADVLLDDRDERAGVLLNDSELLGIPHRIVIGDRALKESNVEYAERRNNEAQ 553 Query: 428 DMSLEEVINYASHRFS 443 +++ E++ + + Sbjct: 554 AVAIGEIVARVTASLN 569 >gi|329954516|ref|ZP_08295607.1| threonine--tRNA ligase [Bacteroides clarus YIT 12056] gi|328527484|gb|EGF54481.1| threonine--tRNA ligase [Bacteroides clarus YIT 12056] Length = 646 Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 149/445 (33%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L KG+ WLP G + +R Q R Sbjct: 230 EYLVLLEEAKKRDHRKIGKEMDLFM-FSDTVGKGLPMWLPKGAALRIRLQEFLRRIQARY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + L++ SG Y YGK+ + + P + I+++ Sbjct: 289 DYQEVMCPPIGNKLLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F + + ++ Sbjct: 349 RSYKDLPLRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDE-FLRVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + ++ + D + + D + + Sbjct: 408 SIVFQSMHFENFEAQISLR--------------DKVNREKYIGSDENWEKAEQAIIEACE 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + VE A Y D + D++ ++ ++ Sbjct: 454 EKGLKAKVEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFQL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GAD + H + G+M AV+ GK +W + I + Sbjct: 503 EYTGADNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LTPDQVAILPISE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D +++ L + D+ E+IG + ++ P +IVG K + +V ++ Sbjct: 557 KFNDYAQEVKDYLKRYDVRAIVDERNEKIGRKIRDNEMKRIPYMLIVGEKEAENREVSVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M E+ + N Sbjct: 617 KQGEGDQGTMKFEDFAKKVNEEVQN 641 >gi|228922573|ref|ZP_04085873.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228837002|gb|EEM82343.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 566 Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats. Identities = 121/267 (45%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMIFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL++ GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSEVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKALKKVATPDQKAIEEV 266 Score = 166 bits (420), Expect = 8e-39, Method: Composition-based stats. Identities = 74/185 (40%), Positives = 105/185 (56%), Gaps = 3/185 (1%) Query: 261 DVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + MG YG Sbjct: 383 DLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L + G + Sbjct: 443 IGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYE 502 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE+ Y Sbjct: 503 VLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYI 561 Query: 439 SHRFS 443 ++ Sbjct: 562 ANILK 566 >gi|153824641|ref|ZP_01977308.1| prolyl-tRNA synthetase [Vibrio cholerae MZO-2] gi|149741859|gb|EDM55888.1| prolyl-tRNA synthetase [Vibrio cholerae MZO-2] Length = 571 Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats. Identities = 114/237 (48%), Positives = 153/237 (64%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M V+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYEAMHVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL P+ A++G IGG+ SHEF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 66/190 (34%), Positives = 111/190 (58%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N D + + RGIEVGHIF GT YS M+ ++GK+ ++M Sbjct: 382 GKVEDLRNVVEGDPSPCGKGTLMLKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVAA IE +HD GIIWPD++APF+++++ + + + A E++YA L+ Sbjct: 442 GCYGIGVSRVVAAAIEQNHDDYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEQLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G +V +DD E+ G F+ +L+G P +I+G + + + E K+R +G +E +++ Sbjct: 502 AAGIEVLFDDRKERPGVMFSDMELIGVPHTIIIGDRSMDEGHFEYKNRRSGEKEAVAMAS 561 Query: 434 VINYASHRFS 443 +I++ + + Sbjct: 562 IIDFIHAKLA 571 >gi|30690426|ref|NP_198035.2| threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS) [Arabidopsis thaliana] gi|27735258|sp|O04630|SYTM_ARATH RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName: Full=Threonine--tRNA ligase; Short=ThrRS; Flags: Precursor gi|332006227|gb|AED93610.1| threonyl-tRNA synthetase [Arabidopsis thaliana] Length = 709 Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 158/442 (35%), Gaps = 39/442 (8%) Query: 2 RRSKYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E + D + K L HQ S G Y +LPLG + + + I+ + Sbjct: 300 KQLKKYLQFLEEAKKYDHRLLGQKQELF--FSHQLSPGSYFFLPLGTRVYNRLMDFIKNQ 357 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E+ P + + +LW SG D+Y M + + P + IF+ Sbjct: 358 YWHRGYTEVITPNMYNMELWQTSGHADNYKDNMFTF-NIEKQEFGLKPMNCPGHCLIFQH 416 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 ++SYR LP + R+E G+ R R F DA+ F T + + Sbjct: 417 RVRSYRELPMRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTTEQVKGE-VQGVLE 475 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G ++ + P + + D Sbjct: 476 FIDYVYKVFGFTY-ELKLSTRP-----------------EKYLGDLETWDKAEADLKEAI 517 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + E A Y D+ + D++ + + ++ F +++L + Sbjct: 518 EAFGKPLVLNEGDGAFYGPKIDI---TVSDAMNRKFQCATLQLD----FQLPIRFNLEYA 570 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A K V + +G++ + A++ + WP ++P + + I Q Sbjct: 571 AE--DEAKKSRPVMIHRAVLGSVERMFAILL---EHYKGKWPFWISPRQAIVCPISEKSQ 625 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 EK+ ++ G V D +I + A L + ++VG + +V ++ Sbjct: 626 ---QYAEKVQKQIKDAGFYVDADLTDRKIDKKVREAQLAQYNYILVVGETEAATGQVSVR 682 Query: 420 HRLTGIREDMSLEEVINYASHR 441 R S+E+++ + Sbjct: 683 VRDNAAHSVKSIEDLLEEFKAK 704 >gi|229047505|ref|ZP_04193095.1| Prolyl-tRNA synthetase [Bacillus cereus AH676] gi|229081074|ref|ZP_04213584.1| Prolyl-tRNA synthetase [Bacillus cereus Rock4-2] gi|229111290|ref|ZP_04240843.1| Prolyl-tRNA synthetase [Bacillus cereus Rock1-15] gi|229191988|ref|ZP_04318958.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 10876] gi|228591539|gb|EEK49388.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 10876] gi|228672066|gb|EEL27357.1| Prolyl-tRNA synthetase [Bacillus cereus Rock1-15] gi|228702118|gb|EEL54594.1| Prolyl-tRNA synthetase [Bacillus cereus Rock4-2] gi|228723752|gb|EEL75107.1| Prolyl-tRNA synthetase [Bacillus cereus AH676] Length = 566 Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats. Identities = 122/267 (45%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKALEKVATPDQKAIEEV 266 Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|218259669|ref|ZP_03475318.1| hypothetical protein PRABACTJOHN_00977 [Parabacteroides johnsonii DSM 18315] gi|218224962|gb|EEC97612.1| hypothetical protein PRABACTJOHN_00977 [Parabacteroides johnsonii DSM 18315] Length = 651 Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats. Identities = 81/445 (18%), Positives = 151/445 (33%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L T G+ WLP G + + ++ Q + Sbjct: 230 EYLALMEEAKKRDHRKIGKELELFT-FSTAVGAGLPLWLPRGTQLRLKLEDFLKRIQKKY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 G ++ P + L+V SG Y YGK+ + + + + P + +IF+S Sbjct: 289 GYQQVMTPHIGGKQLYVTSGHYAKYGKDSFQPIHTPQEGEEFLLKPMNCPHHCEIFKSFP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP F + +R E G+ R R F DA+ F + + K+ Sbjct: 349 RSYKDLPLRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQLKDE-FLKVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 IF L ++ + D + + S + Sbjct: 408 FIIFKALDFENFEAQISLR--------------DKVNRDKYIGSEENWEKAESAIIEACQ 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + +E A Y D + D++ ++ ++ Sbjct: 454 EKGLKAKIEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFEL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G D K H + G+M AV+ GK +W ++I + Sbjct: 503 EYTGEDNKKHRPVMIHRAPFGSMERFVAVLIEHTGGKFPLW------LTPDQVSILPISE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ +L V DD E+IG + +L P +IVG K +++V ++ Sbjct: 557 KFNDYAYEVKRQLEAEDLSVLVDDRNEKIGRKIRDTELKRIPYMLIVGEKEAENNEVSVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M + Sbjct: 617 KQGEGDKGSMKIATFAALLKGEIEE 641 >gi|196036918|ref|ZP_03104302.1| prolyl-tRNA synthetase [Bacillus cereus W] gi|195990473|gb|EDX54457.1| prolyl-tRNA synthetase [Bacillus cereus W] Length = 566 Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats. Identities = 122/267 (45%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKELEKVATPDQKAIEEV 266 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|121635048|ref|YP_975293.1| prolyl-tRNA synthetase [Neisseria meningitidis FAM18] gi|152112936|sp|A1KUG4|SYP_NEIMF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|120866754|emb|CAM10507.1| prolyl-tRNA synthetase [Neisseria meningitidis FAM18] gi|325138239|gb|EGC60808.1| prolyl-tRNA synthetase [Neisseria meningitidis ES14902] Length = 570 Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 163/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIE 234 Score = 159 bits (403), Expect = 7e-37, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 3/196 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A D+ N D P+ + ARGIEVGH+F KY+ M+ +F +GK Sbjct: 374 GRDAAEPEFVDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGK 433 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 ++MG YGIG RVVAA IE ++D KGIIW ++APF++ ++ + R+A +K Sbjct: 434 SQIMEMGCYGIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDAVREAADK 493 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 IYA L G DV DD E+ G ++LLG P ++++G + + + VE R + Sbjct: 494 IYAELLAAGADVLLDDRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQ 553 Query: 428 DMSLEEVINYASHRFS 443 +++ E++ + + Sbjct: 554 AVAIGEIVARVTASLN 569 >gi|323144099|ref|ZP_08078739.1| proline--tRNA ligase [Succinatimonas hippei YIT 12066] gi|322416114|gb|EFY06808.1| proline--tRNA ligase [Succinatimonas hippei YIT 12066] Length = 593 Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats. Identities = 130/235 (55%), Positives = 156/235 (66%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+ENP +A + SH+LMLR G+I Q + GIY WLP G + L V IIREE Sbjct: 22 MRTSKYLLSTLKENPVEAAVVSHRLMLRAGLIRQIASGIYVWLPTGMRVLQKVEKIIREE 81 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q ADLW ESGRY+ YG E+ RL DR + GPTHEEV+T I R Sbjct: 82 LNRAGAIELFMPFVQPADLWKESGRYEKYGPELCRLKDRKKNEFVLGPTHEEVITAIARR 141 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKS R LP YQIQ KFRDE+RPRFGVMR REF+MKDAYSF + + +Y M+ + Sbjct: 142 EIKSARQLPINLYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFHIDHASLEKTYKDMYDA 201 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P+ A++G IGG SHEF VLAD GE + S D+ E Sbjct: 202 YSRIFTRLGLDFRPVEADNGSIGGSSSHEFQVLADAGEDTIVFSDK-SDYAANIE 255 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 78/193 (40%), Positives = 117/193 (60%), Gaps = 3/193 (1%) Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 P +D+ N + + P+ + +GIEVG +F GTKYS M AT G DGK Sbjct: 401 DVPNYEVADLRNVEEGEPSPDGQGTLHLRKGIEVGQVFMLGTKYSESMGATVLGEDGKPI 460 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIY 369 +QMG YGIG RV+AA IE HD KGIIWPDS+APF+++++ IK Q R+A EK+Y Sbjct: 461 NMQMGCYGIGVTRVIAAAIEQHHDDKGIIWPDSMAPFQVAIVAIKPNKSQAVREAAEKLY 520 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 A L G +V +DD E+ G FA +L+G P + +G + ++ VE K R TG +E++ Sbjct: 521 AELEAKGVEVLYDDRDERPGVMFADMELIGIPHVITIGDRGLAAGSVEYKSRKTGQKEEV 580 Query: 430 SLEEVINYASHRF 442 S+++++++ + Sbjct: 581 SVDKILDFVCAKL 593 >gi|228935133|ref|ZP_04097960.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228824498|gb|EEM70303.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 566 Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats. Identities = 122/267 (45%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLNYRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKELEKVATPDQKAIEEV 266 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|30263823|ref|NP_846200.1| prolyl-tRNA synthetase [Bacillus anthracis str. Ames] gi|47529247|ref|YP_020596.1| prolyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49186669|ref|YP_029921.1| prolyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|65321146|ref|ZP_00394105.1| COG0442: Prolyl-tRNA synthetase [Bacillus anthracis str. A2012] gi|118479041|ref|YP_896192.1| prolyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|165872601|ref|ZP_02217232.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167635829|ref|ZP_02394138.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|167639857|ref|ZP_02398126.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|170687854|ref|ZP_02879068.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|170706810|ref|ZP_02897268.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|177652150|ref|ZP_02934696.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|190568409|ref|ZP_03021316.1| prolyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|196042144|ref|ZP_03109427.1| proline--tRNA ligase [Bacillus cereus NVH0597-99] gi|196044700|ref|ZP_03111935.1| prolyl-tRNA synthetase [Bacillus cereus 03BB108] gi|218904947|ref|YP_002452781.1| prolyl-tRNA synthetase [Bacillus cereus AH820] gi|225865800|ref|YP_002751178.1| prolyl-tRNA synthetase [Bacillus cereus 03BB102] gi|227813273|ref|YP_002813282.1| prolyl-tRNA synthetase [Bacillus anthracis str. CDC 684] gi|228916456|ref|ZP_04080022.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228928867|ref|ZP_04091899.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228947538|ref|ZP_04109828.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229092859|ref|ZP_04223993.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-42] gi|229123332|ref|ZP_04252536.1| Prolyl-tRNA synthetase [Bacillus cereus 95/8201] gi|229186058|ref|ZP_04313228.1| Prolyl-tRNA synthetase [Bacillus cereus BGSC 6E1] gi|229602364|ref|YP_002868057.1| proline--tRNA ligase [Bacillus anthracis str. A0248] gi|254683474|ref|ZP_05147334.1| prolyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066] gi|254721995|ref|ZP_05183784.1| prolyl-tRNA synthetase [Bacillus anthracis str. A1055] gi|254735857|ref|ZP_05193563.1| prolyl-tRNA synthetase [Bacillus anthracis str. Western North America USA6153] gi|254739617|ref|ZP_05197311.1| prolyl-tRNA synthetase [Bacillus anthracis str. Kruger B] gi|254756010|ref|ZP_05208041.1| prolyl-tRNA synthetase [Bacillus anthracis str. Vollum] gi|254759329|ref|ZP_05211354.1| prolyl-tRNA synthetase [Bacillus anthracis str. Australia 94] gi|81583682|sp|Q81WL6|SYP1_BACAN RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA ligase 1; Short=ProRS 1 gi|152074739|sp|A0RHJ2|SYP1_BACAH RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA ligase 1; Short=ProRS 1 gi|226731426|sp|B7JJ97|SYP_BACC0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782882|sp|C3P5M1|SYP_BACAA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782883|sp|C3L7A8|SYP_BACAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782884|sp|C1EP43|SYP_BACC3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|30258467|gb|AAP27686.1| proline--tRNA ligase [Bacillus anthracis str. Ames] gi|47504395|gb|AAT33071.1| prolyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49180596|gb|AAT55972.1| prolyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|118418266|gb|ABK86685.1| proline--tRNA ligase [Bacillus thuringiensis str. Al Hakam] gi|164711633|gb|EDR17179.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167512258|gb|EDR87635.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|167528786|gb|EDR91544.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|170128228|gb|EDS97097.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|170668170|gb|EDT18919.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|172082519|gb|EDT67584.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|190560413|gb|EDV14391.1| prolyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|196024735|gb|EDX63407.1| prolyl-tRNA synthetase [Bacillus cereus 03BB108] gi|196026996|gb|EDX65620.1| proline--tRNA ligase [Bacillus cereus NVH0597-99] gi|218535709|gb|ACK88107.1| prolyl-tRNA synthetase [Bacillus cereus AH820] gi|225789269|gb|ACO29486.1| proline--tRNA ligase [Bacillus cereus 03BB102] gi|227007610|gb|ACP17353.1| proline--tRNA ligase [Bacillus anthracis str. CDC 684] gi|228597477|gb|EEK55127.1| Prolyl-tRNA synthetase [Bacillus cereus BGSC 6E1] gi|228660108|gb|EEL15744.1| Prolyl-tRNA synthetase [Bacillus cereus 95/8201] gi|228690481|gb|EEL44264.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-42] gi|228812058|gb|EEM58389.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228830674|gb|EEM76279.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228843035|gb|EEM88117.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229266772|gb|ACQ48409.1| proline--tRNA ligase [Bacillus anthracis str. A0248] Length = 566 Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats. Identities = 122/267 (45%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKELEKVATPDQKAIEEV 266 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|325128468|gb|EGC51349.1| prolyl-tRNA synthetase [Neisseria meningitidis N1568] Length = 570 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 164/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL+ P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIE 234 Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 3/196 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A D+ N D P+ + ARGIEVGH+F KY+ M+ +F +GK Sbjct: 374 GRDAAEPEFVDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGK 433 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 ++MG YGIG RVVAA IE ++D KGIIW ++APF++ ++ + R+A +K Sbjct: 434 SQIMEMGCYGIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADK 493 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 IYA L G DV DD E+ G ++LLG P ++++G + + + VE R + Sbjct: 494 IYAELLAAGADVLLDDRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQ 553 Query: 428 DMSLEEVINYASHRFS 443 +++ E++ + + Sbjct: 554 AVAIGEIVARVTASLN 569 >gi|323705637|ref|ZP_08117211.1| prolyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11] gi|323535114|gb|EGB24891.1| prolyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11] Length = 570 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 116/265 (43%), Positives = 167/265 (63%), Gaps = 1/265 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F+P ++E P +AEI SH LML+ M+ + + G+Y +LPLG++ L + I+REE Sbjct: 1 MRLSQLFIPTMREVPAEAEIPSHILMLKAAMMRKLASGVYIYLPLGKRVLKKIEEIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ + + A+L ESGR+D +G EM +L DRND+ GPTHEEV TD+ R+ Sbjct: 61 MDRAGAQEVLMSAIIPAELLKESGRWDVFGPEMFKLKDRNDREFCLGPTHEEVFTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP T YQIQ K+RDE RPRFGVMRSREF+MKDAYSFD+ +G S++KM+ + Sbjct: 121 DVKSYRQLPLTIYQIQTKYRDERRPRFGVMRSREFIMKDAYSFDVDWDGLDVSFDKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK + A++G +GG S EF+V ++ GE + + + E + Sbjct: 181 YCRIFDRCGLKYTVVEADTGAMGGKDSKEFMVTSNVGEAVIAYCDNC-GYAANEEKAECT 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 +++ + Y +E Sbjct: 240 VQNTIDEEMRPLEKIYTPDVKTIDE 264 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 76/190 (40%), Positives = 104/190 (54%), Gaps = 3/190 (1%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 SDV D P+ RGIEVGHIF GTKYS + A + +G + + MG Sbjct: 381 VVSDVRKVVDGDKCPKCGSPLKLDRGIEVGHIFKLGTKYSDALGANYIDENGNEKPIIMG 440 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R+ AA IE +HD KGIIWP S+AP+ + ++ + + V RD EK+Y LSK Sbjct: 441 CYGIGLNRIAAAAIEQNHDDKGIIWPMSIAPYHVIIVPVNVSNDVQRDLAEKLYDELSKA 500 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD + G +F ADLLG P+++ VG K D+ VE+K R ++ +EV+ Sbjct: 501 GIEVLIDDRDLRAGVKFNDADLLGIPIRITVGKK-AEDNIVELKLRREEKPIELKYDEVL 559 Query: 436 NYASHRFSNN 445 S N Sbjct: 560 GKVKELISEN 569 >gi|3617770|emb|CAA74705.1| threonyl-tRNA synthetase [Arabidopsis thaliana] Length = 709 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 158/442 (35%), Gaps = 39/442 (8%) Query: 2 RRSKYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E + D + K L HQ S G Y +LPLG + + + I+ + Sbjct: 300 KQLKKYLQFLEEAKKYDHRLLGQKQELF--FSHQLSPGSYFFLPLGTRVYNRLMDFIKNQ 357 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E+ P + + +LW SG D+Y M + + P + IF+ Sbjct: 358 YWHRGYTEVITPNMYNMELWQTSGHADNYKDNMFTF-NIEKQEFGLKPMNCPGHCLIFQH 416 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 ++SYR LP + R+E G+ R R F DA+ F T + + Sbjct: 417 RVRSYRELPLRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTTEQVKGE-VQGVLE 475 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G ++ + P + + D Sbjct: 476 FIDYVYKVFGFTY-ELKLSTRP-----------------EKYLGDLETWDKAEADLKEAI 517 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + E A Y D+ + D++ + + ++ F +++L + Sbjct: 518 EAFGKPLVLNEGDGAFYGPKIDI---TVSDAMNRKFQCATLQLD----FQLPIRFNLEYA 570 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A K V + +G++ + A++ + WP ++P + + I Q Sbjct: 571 AE--DEAKKSRPVMIHRAVLGSVERMFAILL---EHYKGKWPFWISPRQAIVCPISEKSQ 625 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 EK+ ++ G V D +I + A L + ++VG + +V ++ Sbjct: 626 ---QYAEKVQKQIKDAGFYVDADLTDRKIDKKVREAQLAQYNYILVVGETEAATGQVSVR 682 Query: 420 HRLTGIREDMSLEEVINYASHR 441 R S+E+++ + Sbjct: 683 VRDNAAHSVKSIEDLLEEFKAK 704 >gi|254932366|ref|ZP_05265725.1| prolyl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|293583922|gb|EFF95954.1| prolyl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|328475041|gb|EGF45829.1| prolyl-tRNA synthetase [Listeria monocytogenes 220] gi|332311762|gb|EGJ24857.1| Prolyl-tRNA synthetase [Listeria monocytogenes str. Scott A] Length = 568 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 124/294 (42%), Positives = 167/294 (56%), Gaps = 5/294 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E YN M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--- 237 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D+ +E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYSD-ASDYAANTEMAPVL 239 Query: 238 -DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 L +E+ P + E L + + + ++ I Sbjct: 240 YMEKKSHELEKDMEKVATPDQKSIADIVEFLEVPIEKTMKSMLYQVDDEVIMVL 293 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 65/180 (36%), Positives = 101/180 (56%), Gaps = 3/180 (1%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ ++ D P+ + V GIEVGHIF GTKYS M+AT +G+ + MG YG Sbjct: 383 DLRMIQVGDLSPDGQGVIKFAEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R+++A+ E S+D G +W ++PF + LI + + E +Y+ L G Sbjct: 443 IGVSRILSAIAEQSNDENGFVWDKQISPFDLHLIPVNVKSEEQVAFAETLYSSLQDAGFS 502 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G +FA ADL+G P+++ VG K ++ VE+K R TG ++ +E++N Sbjct: 503 VLIDDRAERAGVKFADADLIGLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDELLNTL 561 >gi|303237224|ref|ZP_07323794.1| threonine--tRNA ligase [Prevotella disiens FB035-09AN] gi|302482611|gb|EFL45636.1| threonine--tRNA ligase [Prevotella disiens FB035-09AN] Length = 649 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 151/445 (33%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD + L + KG+ WLP G + + ++R+ Q Sbjct: 232 EYLVMLEEAKKRDHRKIGKDMELFM-FSERVGKGLPIWLPKGTQVRLRLQEVLRKLQRPY 290 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + +L+V SG Y YGK+ + + + P + +IF Sbjct: 291 HYQEVITPGIGGKNLYVTSGHYAHYGKDAFQPIQTPEEGEEYMLKPMNCPHHCEIFAHKP 350 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + FR E G+ R R F DA+ F + K + + Sbjct: 351 RSYKDLPLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHLFVRPEQVKKE-FEDVIDII 409 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++F G ++ + D + + + D + + + Sbjct: 410 QKVFITFGFENYEAQISLR--------------DPDDKEKYIGSDEIWEESERAIKEACE 455 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + VE A Y D + D++ ++ ++ F Sbjct: 456 EKGLKARVEIGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLPNRF--------KL 504 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D + G++ AV+ G +W + I + Sbjct: 505 EYTAEDNTKQTPVMIHRAPFGSLERFTAVLIEHTAGHFPLW------LTPDQVAILPISE 558 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 E++ A DD E+IG + +L P VIVG + ++D V ++ Sbjct: 559 KYNGYAEEVRAYFEANEVRAIVDDRNEKIGRKIRDNELKRVPYMVIVGEQEMADGLVSMR 618 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M E+ + + + Sbjct: 619 QQGGGEQATMPKEDFVKRIQNEVAE 643 >gi|298530062|ref|ZP_07017464.1| threonyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1] gi|298509436|gb|EFI33340.1| threonyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1] Length = 646 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 79/439 (17%), Positives = 151/439 (34%), Gaps = 42/439 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K+ + + RD +L L + + G+ + P G + R+E Sbjct: 228 LKKHLTRLEEARKRDHRKLGAQLDLFS-FSEEAGPGMPIFHPKGALIRTILEDFERKEHL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 R G + P + +LW +SG YD+Y + M +++ P + I++S + Sbjct: 287 RRGYQIVQGPQILRRELWEKSGHYDNYRENM-YFTHIDEQVYGVKPMNCLSHMLIYKSKL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP ++++ R E G++R REF DA+ + + Sbjct: 346 RSYRDLPLRYFELGRVHRHEKSGVLHGLLRVREFTQDDAHILCRPDQLQDE-ITGVVNFV 404 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + G E++V T + S + + + + D Sbjct: 405 RDVMGLFG------------------FEYVVEVSTRPEKHIGSSEAWEKSTRALTSALDA 446 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + I A Y D+ KL D+L + + + F ++ T Sbjct: 447 LDMPYEINPGDGAFYGPKIDI---KLKDALDRKWQCATVQCD----FTLPERFD----LT 495 Query: 302 FKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G DG+ + M + R + +IE A Sbjct: 496 YTGEDGRKYRPVMLHRVVLGAIERFLGVLIEHYGGAFPTWLAPVQARIMNIT-------D 548 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 R ++G V DD E++G + A + P ++ G + V +S + ++ Sbjct: 549 AQAGYVHDCADRFRQMGIRVEVDDRNEKLGYKVREAQMEKIPYVLVAGDQEVQESGLNVR 608 Query: 420 HRLTGIREDMSLEEVINYA 438 R MS++EV + Sbjct: 609 LRGGKNLGLMSIQEVADQI 627 >gi|114570943|ref|YP_757623.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Maricaulis maris MCS10] gi|122315357|sp|Q0AM08|SYT_MARMM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|114341405|gb|ABI66685.1| Ser-tRNA(Thr) hydrolase [Maricaulis maris MCS10] Length = 644 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 80/439 (18%), Positives = 142/439 (32%), Gaps = 42/439 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 I + RD ++ L + ++G W P G + V + +R G Sbjct: 233 LHRIEEAEKRDHRKLGKQMELF--HFQEEAQGQVFWHPNGWRLYRTVTSYMRRRLEAAGY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEML-RLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P L W SG +D Y + M D+ +K + P + +F KSY Sbjct: 291 VEIRTPQLMDRKFWEASGHWDKYRENMFISSIDQEEKVLAVKPMNCPCHVQVFNQGQKSY 350 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R E G+MR R F+ DA+ F + + + + + Sbjct: 351 RDLPLRMAEFGSCHRYEPSGSLHGLMRVRGFVQDDAHIFCTSDQITAE-VSDFCELLKSV 409 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + ++ P S E D S + Sbjct: 410 YADFGFEEPRIKFSDRPEQRVGSDE-----------------VWDQAEASLKAAAEASGL 452 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK- 303 A Y D + D++ + + F + + A+F Sbjct: 453 DYEYNPGDGAFYGPKLDF---VVKDAIGREWQTGTIQCD----FNLPER----LDASFIG 501 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 K V + +G++ V+ S+ GK W + I Sbjct: 502 DDSEKHRPVMLHRAILGSLERFLGVLIESYAGKLPFW------LAPRQVVIATITSDADG 555 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E++ A + K G D E+I + + P+ +VG K D + ++ Sbjct: 556 YAEEVKAAMVKAGLHAETDLRNEKINYKVREHSVGKVPVIAVVGRKEAEDGTLALRFLGE 615 Query: 424 G--IREDMSLEEVINYASH 440 G +E +SL + I S Sbjct: 616 GGKTQEILSLADAIARLSE 634 >gi|148652560|ref|YP_001279653.1| prolyl-tRNA synthetase [Psychrobacter sp. PRwf-1] gi|172048509|sp|A5WDG2|SYP_PSYWF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|148571644|gb|ABQ93703.1| prolyl-tRNA synthetase [Psychrobacter sp. PRwf-1] Length = 576 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 120/274 (43%), Positives = 170/274 (62%), Gaps = 4/274 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DA+I S +LMLR G+I + + G+Y WLP+G K L V I+REE Sbjct: 1 MRASQFLFATLKETPSDADIVSSQLMLRAGLIRKLASGLYVWLPMGLKVLQKVEKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E+ +P Q A+LW ESGR++ YG E+LR DR+++ + GPTHEEV+TD+ R Sbjct: 61 MQNIGGQEVLMPMTQPAELWQESGRFEDYGPELLRFTDRHNRDFVLGPTHEEVITDLARG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP TF+QIQ KFRDE+RPRFG+MR+REF MKDAYSF + + +Y +M+ + Sbjct: 121 ELRSYKQLPVTFFQIQGKFRDEIRPRFGIMRAREFTMKDAYSFHVDQASLEVTYQQMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP---SENT 237 Y RIF RLGL + A++G IGG SHEF VLA +GE + S D+ +E Sbjct: 181 YTRIFQRLGLNFRAVLADTGSIGGSASHEFHVLAGSGEDAIAFSD-GSDYAANVELAEAI 239 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 D+ + + + P T++ + L L Sbjct: 240 CTDERAAPTQDKQNVSTPKIQTNEELAKFLDIPL 273 Score = 165 bits (417), Expect = 2e-38, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 103/197 (52%), Gaps = 8/197 (4%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A D+ N D+ P+ K RGIEVGHIF G KYS ++ T G DGK Sbjct: 379 ERDATITDVVDIRNVVEGDASPDGKGTLSIKRGIEVGHIFQLGDKYSKALNCTVMGEDGK 438 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA------PFKISLINIKAHDQVCR 362 + MG YGIG R++AA IE +HD GIIW + PF I+++ +K+ + Sbjct: 439 PVTLMMGCYGIGVSRIIAAAIEQNHDDNGIIWAKTPDIKDSIAPFDIAIVPMKSKEDTVM 498 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 E +Y L G +V DD E+ G +FA +L+G P +++V + +++ K E R Sbjct: 499 QTAEALYEELKARGLNVILDDRNERPGVKFADLELIGIPHRIVVSDRNLAEDKYEYVDRR 558 Query: 423 TGIREDMSLEEVINYAS 439 G ++ +S EE++ S Sbjct: 559 DGEKQLLSREELLAKVS 575 >gi|227821825|ref|YP_002825795.1| threonyl-tRNA synthetase [Sinorhizobium fredii NGR234] gi|254783532|sp|C3MB49|SYT_RHISN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|227340824|gb|ACP25042.1| ThrS; threonyl-tRNA synthetase [Sinorhizobium fredii NGR234] Length = 661 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 80/444 (18%), Positives = 147/444 (33%), Gaps = 39/444 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD ++ L + G+ W G + ++ A +R Sbjct: 233 QYLHVLAEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHGKGWRVFQSLVAYMRRRLE-V 289 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIFR 119 E++ P + LW SG + Y M ++ +D+ P + IF+ Sbjct: 290 DYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDETDDDRVFALKPMNCPGHIQIFK 349 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 +KSYR LP + R E G+MR R F DA+ F + + Sbjct: 350 HGLKSYRELPVRMAEFGAVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKIN- 408 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L ++ G K I ++ + P S A+ T V I +++ Sbjct: 409 DLILSVYEDFGFKEIVVKLSTRPDKRVGSDALWDRAEAVMTDVL-------NTIEAQSEG 461 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 L A Y + L D++ + ++ FG Sbjct: 462 RIKTGIL----PGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------- 507 Query: 299 SATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 A + D + + G+M ++ ++ G +W + + Sbjct: 508 -AFYIDKDSEKRQPVMIHRAICGSMERFLGILLENYAGHMPLW------ISPLQVVVATI 560 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D ++ ARL + G V D E+I + + P+ V+ G + + V Sbjct: 561 TSDADDYGREVAARLREAGLTVETDFRNEKINYKIREHSVTKVPVIVVCGKREAEERSVN 620 Query: 418 IKHRLTGIREDMSLEEVINYASHR 441 I+ + + MSLEE + S Sbjct: 621 IRRLGSQAQTAMSLEEAVAALSSE 644 >gi|149190039|ref|ZP_01868316.1| prolyl-tRNA synthetase [Vibrio shilonii AK1] gi|148836069|gb|EDL53029.1| prolyl-tRNA synthetase [Vibrio shilonii AK1] Length = 571 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 112/237 (47%), Positives = 152/237 (64%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGAELLRFTDRHTRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFSMMDAYSFDIDKEGLEKSYQAMHEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL P+ A++G IGG+ SHEF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAF-SSESDYAANIEKA 236 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 68/206 (33%), Positives = 114/206 (55%), Gaps = 3/206 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPM 298 D I D+ N D P + RGIEVGHIF G YS M Sbjct: 366 DDKHYFGINWGRDVELGKVEDLRNVVEGDPSPCGQGTIQLKRGIEVGHIFQLGKNYSEKM 425 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 + G DGK+ ++MG YGIG RVVA+ IE ++D GIIWPD++APF+++++ + Sbjct: 426 NCGVLGPDGKNTILEMGCYGIGVSRVVASAIEQNNDKYGIIWPDAIAPFQVAIVPMNMHK 485 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + ++A EK+YA L+ G +V +DD E+ G F+ +L+G P +++G + + + E Sbjct: 486 SERVKEAAEKLYAELTAAGIEVLFDDRKERPGVMFSDIELIGIPHTIVIGDRSMDEGNFE 545 Query: 418 IKHRLTGIREDMSLEEVINYASHRFS 443 K+R TG + +++E+++ + + + + Sbjct: 546 YKNRRTGDKTPVAMEQIVAHVTSQLA 571 >gi|282899245|ref|ZP_06307218.1| Prolyl-tRNA synthetase [Cylindrospermopsis raciborskii CS-505] gi|281195881|gb|EFA70805.1| Prolyl-tRNA synthetase [Cylindrospermopsis raciborskii CS-505] Length = 603 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 124/294 (42%), Positives = 168/294 (57%), Gaps = 5/294 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+++P DAEI SHKL+LR G I + G+Y++LPL + L ++ I+REE Sbjct: 1 MRLSQKLFVTLRDDPADAEIPSHKLLLRAGYIRRIGSGVYAYLPLMWRVLQKISQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N TGA E +P LQ A+LW ESGR+D+Y K M L DR ++ + GPTHEEV+T I Sbjct: 61 MNATGAEECLLPQLQPAELWKESGRWDTYTKAEGIMFSLIDRREQHLGLGPTHEEVITTI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF E K +Y M Sbjct: 121 GRDMIRSYRQLPVHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHTDEESLKKTYQDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 + +Y I R GL + A+SG IGG S EF+VLAD GE +V ++D + Sbjct: 181 YQAYSNILRRCGLAFRAVEADSGAIGGSGSTEFMVLADAGEDEVLYTQDGKYAANVEKAV 240 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 ++ P AT + EK+ D L + + + ++ G Sbjct: 241 SLPADAEPSNFKTCEKVPTVATETI--EKVCDYLKCSPTQVVKNVLYQTVYDQG 292 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 71/202 (35%), Positives = 108/202 (53%), Gaps = 5/202 (2%) Query: 247 SIVEQWTAPYAATSDVHNEKLFDSL---PENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + EQ+ P D+ K D P +ARGIE GHIF GTKYSL M AT+ Sbjct: 400 NWQEQFKLPE-LVVDIRKAKPGDRSVHDPSQTLETARGIEAGHIFQLGTKYSLAMGATYT 458 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 G++ + MG YG+G R+ + +E S+DG GIIWP ++AP+ + D + Sbjct: 459 NEQGEEKPLVMGCYGVGVSRLAQSAVEQSYDGDGIIWPVAIAPYHAIISIPNIKDTHQVE 518 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 EKIY L+KVG + DD E+ G +F ADL+G P +++ G + +S KVE+ R T Sbjct: 519 IAEKIYTELNKVGIETLLDDRNERAGVKFKDADLIGIPYRIVTG-RSISHGKVEVVTRAT 577 Query: 424 GIREDMSLEEVINYASHRFSNN 445 +++++E +++ S Sbjct: 578 RESQEIAIENLVDTLESWISQR 599 >gi|145803|gb|AAA23710.1| RNA synthesis factor (drpA) [Escherichia coli] Length = 516 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 118/235 (50%), Positives = 158/235 (67%), Gaps = 2/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+++P FYQIQ KFRDE+RPRFGVMRSREFLMKDAYSF + E + +Y+ M+ + Sbjct: 121 ELSSYKHVPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +IF R+GL ++A++G IGG GE V S D+ E Sbjct: 181 YSKIFSRMGLDFRAVQADTGSIGG-RPLTNSRCWRRGEDDVVFSDT-SDYAANIE 233 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 83/133 (62%), Gaps = 3/133 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 382 EVADIRNVVAGDPSPDGQGRLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 441 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 442 CYGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 501 Query: 375 VGCDVFWDDMGEQ 387 G +V DD E+ Sbjct: 502 QGIEVLLDDRKER 514 >gi|229197929|ref|ZP_04324645.1| Prolyl-tRNA synthetase [Bacillus cereus m1293] gi|228585647|gb|EEK43749.1| Prolyl-tRNA synthetase [Bacillus cereus m1293] Length = 566 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 122/267 (45%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKELEKVATPDQKAIEEV 266 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|49481697|ref|YP_037880.1| prolyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|81395110|sp|Q6HEZ6|SYP1_BACHK RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA ligase 1; Short=ProRS 1 gi|49333253|gb|AAT63899.1| proline--tRNA ligase (prolyl-tRNA synthetase) [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 566 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 122/267 (45%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKELEKVATPDQKAIEEV 266 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|52141669|ref|YP_085160.1| prolyl-tRNA synthetase [Bacillus cereus E33L] gi|81686584|sp|Q636K7|SYP1_BACCZ RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA ligase 1; Short=ProRS 1 gi|51975138|gb|AAU16688.1| proline--tRNA ligase (prolyl-tRNA synthetase) [Bacillus cereus E33L] Length = 566 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 122/267 (45%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKELEKVATPDQKAIEEV 266 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEIKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|290893569|ref|ZP_06556552.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J2-071] gi|290556914|gb|EFD90445.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J2-071] Length = 568 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 124/294 (42%), Positives = 167/294 (56%), Gaps = 5/294 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E YN M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--- 237 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D+ +E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYSD-ASDYAANTEMAPVL 239 Query: 238 -DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 L +E+ P + E L + + + ++ I Sbjct: 240 YMEKKSHELEKELEKVATPDQKSIADIVEFLEVPIEKTMKSMLYQVDEEVIMVL 293 Score = 163 bits (412), Expect = 6e-38, Method: Composition-based stats. Identities = 65/180 (36%), Positives = 100/180 (55%), Gaps = 3/180 (1%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ ++ D P+ + V GIEVGHIF GTKYS M+AT +G+ + MG YG Sbjct: 383 DLRMIQVGDLSPDGQGVIKFAEGIEVGHIFKLGTKYSQAMNATILDENGRAQPIIMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R+++A+ E S+D G +W ++PF + LI + + E +Y L G Sbjct: 443 IGVSRILSAIAEQSNDENGFVWDKQISPFDLHLIPVNMKSEEQVAFAETLYTSLQGAGFS 502 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G +FA ADL+G P+++ VG K ++ VE+K R TG ++ +E++N Sbjct: 503 VLIDDRAERAGVKFADADLIGLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDELLNTL 561 >gi|269213497|ref|ZP_06158007.1| proline--tRNA ligase [Neisseria cinerea ATCC 14685] gi|269146261|gb|EEZ72679.1| proline--tRNA ligase [Neisseria cinerea ATCC 14685] Length = 594 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 164/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 25 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 84 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 85 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 144 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 145 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 204 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL+ P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 205 YCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANVE 258 Score = 163 bits (412), Expect = 6e-38, Method: Composition-based stats. Identities = 69/230 (30%), Positives = 110/230 (47%), Gaps = 7/230 (3%) Query: 222 FCSKDFMDFPIPSENTDFDDIISLNSIVEQW----TAPYAATSDVHNEKLFDSLPEN--K 275 F K + DF + + A D+ N D P+ + Sbjct: 365 FTGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEFVDLRNVVEGDESPDGQGR 424 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D Sbjct: 425 LKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDE 484 Query: 336 KGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KGIIW ++APF++ ++ + R+A +KIYA L G DV DD E+ G Sbjct: 485 KGIIWTKAMAPFEVVIVPMNYKKSDAVREAADKIYAELLAAGADVLLDDRDERAGVLLND 544 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 ++LLG P ++++G + + + VE R + + + E++ + + Sbjct: 545 SELLGIPHRIVIGDRALKEGNVEYAERRDNEAQSVPIGEIVARVTDSLNT 594 >gi|256827500|ref|YP_003151459.1| prolyl-tRNA synthetase, family II [Cryptobacterium curtum DSM 15641] gi|256583643|gb|ACU94777.1| prolyl-tRNA synthetase, family II [Cryptobacterium curtum DSM 15641] Length = 588 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 109/272 (40%), Positives = 167/272 (61%), Gaps = 2/272 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S ++P L+E P DA+IASH+L+LR GM+ + + G Y++LPLG + + + I+REE Sbjct: 6 RMSALYVPTLKEVPTDADIASHQLLLRAGMMRKSATGAYTYLPLGWRVIRKIERIVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G+ E+ +P +Q A+LW ESGR++ YG E++R+ DR+ + GPTHEE++T + R+ Sbjct: 66 DAIGSQEIMMPVIQPAELWHESGRWNDYGPELMRMDDRHGHGLCLGPTHEELITALVRNE 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 ++SY+ LP YQIQ KFRDE+RPRFG+MRSREF+MKDAYSF + E + +Y++M +Y Sbjct: 126 LRSYKQLPVILYQIQSKFRDEIRPRFGLMRSREFIMKDAYSFHASKESLQKTYDEMSAAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RI R+GL P+ A++G IGG ++ E+ LAD GE ++ +E Sbjct: 186 ARICERVGLVYRPVEADAGQIGGSVTCEYHALADAGEAELASCSCGW--ASNTEVAACQC 243 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + E + + + F PE Sbjct: 244 HPTEYPETELRKVATPGVATIADLAQFLKCPE 275 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 69/178 (38%), Positives = 103/178 (57%), Gaps = 2/178 (1%) Query: 259 TSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ K D PE + RGIEVG +F G KYS M ATF DG + MG Sbjct: 380 WADLCTIKAGDVCPECGELVEITRGIEVGQVFQLGDKYSRAMGATFMAEDGSEQPFLMGC 439 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YG+G R +AAV+E +D GI WP SVAP ++ ++ + D+ A E + L+ +G Sbjct: 440 YGVGVSRTMAAVVEQHNDEYGIKWPLSVAPAQVCILPLAVGDEEVEPAAEALAHELAGMG 499 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +V DD E+ G +FA ADLLG+PLQ+I+G + + + E+K+R TG + ++++E Sbjct: 500 LEVVIDDRKERPGVKFAEADLLGWPLQIIIGKRGLDAGEYELKNRSTGAKRTIAIDEF 557 >gi|254828679|ref|ZP_05233366.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] gi|254829924|ref|ZP_05234579.1| prolyl-tRNA synthetase [Listeria monocytogenes 10403S] gi|254898516|ref|ZP_05258440.1| prolyl-tRNA synthetase [Listeria monocytogenes J0161] gi|254911993|ref|ZP_05262005.1| prolyl-tRNA synthetase [Listeria monocytogenes J2818] gi|254936320|ref|ZP_05268017.1| prolyl-tRNA synthetase [Listeria monocytogenes F6900] gi|284801704|ref|YP_003413569.1| prolyl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284994846|ref|YP_003416614.1| prolyl-tRNA synthetase [Listeria monocytogenes 08-5923] gi|258601083|gb|EEW14408.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] gi|258608910|gb|EEW21518.1| prolyl-tRNA synthetase [Listeria monocytogenes F6900] gi|284057266|gb|ADB68207.1| prolyl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284060313|gb|ADB71252.1| prolyl-tRNA synthetase [Listeria monocytogenes 08-5923] gi|293589957|gb|EFF98291.1| prolyl-tRNA synthetase [Listeria monocytogenes J2818] Length = 568 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 124/294 (42%), Positives = 167/294 (56%), Gaps = 5/294 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E YN M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--- 237 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D+ +E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYSD-ASDYAANTEMAPVL 239 Query: 238 -DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 L +E+ P + E L + + + ++ I Sbjct: 240 YMEKKSHELEKDLEKVATPDQKSITDIVEFLEVPIEKTMKSMLYQVDDEVIMVL 293 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 65/180 (36%), Positives = 100/180 (55%), Gaps = 3/180 (1%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ ++ D P+ + V GIEVGHIF GTKYS M+AT +G+ + MG YG Sbjct: 383 DLRMIQVGDLSPDGQGVIKFAEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R+++A+ E S+D G +W ++PF + LI + + E +Y L G Sbjct: 443 IGVSRILSAIAEQSNDENGFVWDKQISPFDLHLIPVNMKSEEQVAFAETLYTSLQDAGFS 502 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G +FA ADL+G P+++ VG K ++ VE+K R TG ++ +E++N Sbjct: 503 VLIDDRAERAGVKFADADLIGLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDELLNTL 561 >gi|333029961|ref|ZP_08458022.1| threonyl-tRNA synthetase [Bacteroides coprosuis DSM 18011] gi|332740558|gb|EGJ71040.1| threonyl-tRNA synthetase [Bacteroides coprosuis DSM 18011] Length = 647 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 80/446 (17%), Positives = 152/446 (34%), Gaps = 36/446 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD ++ L KG+ WLP G + +++ Q Sbjct: 229 LTEYLEMMEEAKKRDHRKIGKEMELFM-FSETVGKGLPMWLPKGTALRLRLEDFLKKIQK 287 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRS 120 G ++ P + + L+V SG Y YGK+ + + + P + +I++ Sbjct: 288 EFGYEQVITPHIGNKLLYVTSGHYAKYGKDSFQPIHTPEEGEEYLLKPMNCPHHCEIYKW 347 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SYR LP + +R E G+ R R F DA+ F P+ K + + Sbjct: 348 TPRSYRELPLRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCR-PDQVKEEFLSVMD 406 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 IF L ++ + D + + D + + Sbjct: 407 IIFIIFKALNFENFEAQISLR--------------DPVNREKYIGSDENWEKAENAIVEA 452 Query: 240 DDIISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 L + +E A Y D + D+L ++ ++ F +Y+ Sbjct: 453 CKEKGLKAKIEYGEAAFYGPKLDFM---VRDALGRKWQLGTIQVDYNLPERFNLEYTGAD 509 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + V + G+M AV+ GK +W + I Sbjct: 510 NLK-------HRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LTPDQVAILPIS 556 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + D ++ L K DD E+IG + ++ P +IVG K + +V + Sbjct: 557 ERFNDYAHEVKKYLDKNDIRASVDDRNEKIGRKIRDNEVKRIPYMLIVGEKEAENREVSV 616 Query: 419 KHRLTGIREDMSLEEVINYASHRFSN 444 + + G + + LE+ + N Sbjct: 617 RKQGEGDQGVIKLEDFAKKLNEEVQN 642 >gi|229129095|ref|ZP_04258068.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|229146390|ref|ZP_04274761.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|296504314|ref|YP_003666014.1| prolyl-tRNA synthetase [Bacillus thuringiensis BMB171] gi|228637023|gb|EEK93482.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|228654332|gb|EEL10197.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|296325366|gb|ADH08294.1| prolyl-tRNA synthetase [Bacillus thuringiensis BMB171] Length = 566 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 122/267 (45%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKALEKVATPDQKAIEEV 266 Score = 166 bits (420), Expect = 7e-39, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|197334450|ref|YP_002155444.1| prolyl-tRNA synthetase [Vibrio fischeri MJ11] gi|226701355|sp|B5FBD6|SYP_VIBFM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|197315940|gb|ACH65387.1| prolyl-tRNA synthetase [Vibrio fischeri MJ11] Length = 571 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 114/237 (48%), Positives = 153/237 (64%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHQLMLRAGMIRRLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHVRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY+ M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKEGLQKSYDAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 62/190 (32%), Positives = 106/190 (55%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N D + RGIEVGHIF GT YS M+ A+GK+ ++M Sbjct: 382 GQVEDLRNVVEGDPSPCGKGTLQLKRGIEVGHIFQLGTAYSEAMNCGVLDANGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVA+ IE ++D GI+WP+++APF ++++ + + ++A EK+YA L+ Sbjct: 442 GCYGIGVSRVVASAIEQNNDEYGIVWPEAIAPFTVAIVPMNMHKSERVKEAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G +V +DD E+ G F +L+G P +++G + + + E K+R +E + + Sbjct: 502 AMGIEVLFDDRKERPGVMFKDIELIGIPHTIVIGDRSMDEGNFEYKNRRANTKEAVEMAN 561 Query: 434 VINYASHRFS 443 ++ + + S Sbjct: 562 IVEHIKAQLS 571 >gi|307945488|ref|ZP_07660824.1| threonyl-tRNA synthetase [Roseibium sp. TrichSKD4] gi|307771361|gb|EFO30586.1| threonyl-tRNA synthetase [Roseibium sp. TrichSKD4] Length = 656 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 148/445 (33%), Gaps = 40/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD ++ L + G+ W G N+ + +R Sbjct: 237 KAYLHMLEEAEKRDHRKLGREMDLF--HFQEEGPGVVFWHDKGWTLFQNLVSYMRRRL-S 293 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEML-----RLADRNDKAMIYGPTHEEVMTDIF 118 E++ P + S LW SG + Y + M D + P + IF Sbjct: 294 GDYQEVNAPQVLSTKLWETSGHWAWYKENMFAVQGADPEDEDTHVFALKPMNCPGHIQIF 353 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + + R E G+MR R F DA+ F + ++ Sbjct: 354 KHGLKSYRDLPLRMAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHVFCTDEQMAEECLKIN 413 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G + I ++ + P S E A+ K S Sbjct: 414 -DLILSVYEHFGFEKIVVKLSTRPEKRVGSDELWDHAEE-----VMGKVLEQIKEQSGGR 467 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 DI + A Y + L D++ + ++ FG Sbjct: 468 VETDI------LPGEGAFYGPKFEY---TLRDAIGREWQCGTTQVDFNLPERFG------ 512 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + +G+ + G+M ++ ++ G +W + ++ Sbjct: 513 --AFYVDNNGEKQTPVMIHRAICGSMERFLGILIENYSGHFPLWLAPLQVVVATIT---- 566 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++ +L G V D E+I + L P V+ G + + V Sbjct: 567 --SEADDYGREVAGKLRAAGLKVETDFRNEKINYKVREHSLAKVPAIVVCGMREAEEKSV 624 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 I+ + + MSL+E I Sbjct: 625 NIRRLGSKHQTAMSLDEAIEAFRSE 649 >gi|229134626|ref|ZP_04263436.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST196] gi|228648887|gb|EEL04912.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST196] Length = 566 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 124/311 (39%), Positives = 175/311 (56%), Gaps = 5/311 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+++LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQASELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y+ ++ + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYSGLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD-- 238 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 239 --FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + +E+ P + + L + + + ++ + + Sbjct: 240 ATYTKSDEAEKALEKVATPDQKAIEEVSAFLNIAAEKCIKSMVFKVDAKLVVVLVRGDNE 299 Query: 297 PMSATFKGADG 307 K G Sbjct: 300 VNDVKVKNVYG 310 Score = 166 bits (421), Expect = 6e-39, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTKPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|228960035|ref|ZP_04121699.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228799551|gb|EEM46504.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 566 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 122/267 (45%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKALEKVATPDQKAIEEV 266 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKAQLLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|294010776|ref|YP_003544236.1| threonyl-tRNA synthetase [Sphingobium japonicum UT26S] gi|292674106|dbj|BAI95624.1| threonyl-tRNA synthetase [Sphingobium japonicum UT26S] Length = 668 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 82/450 (18%), Positives = 149/450 (33%), Gaps = 48/450 (10%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD ++ L + Q + G W P G + A +R + G Sbjct: 245 LTRLEEAARRDHRKLGAEMDLF--HLQQEAHGSVFWHPKGYIIWRALEAYMRRAIDDAGY 302 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK-------------AMIYGPTHEEV 113 E+ P + A W +SG + Y + M + D M P + Sbjct: 303 REVKTPQVMDARQWEQSGHWGKYRENMFVIPDEVPNVEDEGPLVSDDADWMALKPMNCPA 362 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IFR IKSYR+LP FY+ R+E G+MR R+F DA+ F + + Sbjct: 363 HVLIFRQGIKSYRDLPLRFYENGCCHRNEPHGALHGLMRVRQFTQDDAHIFCREDQIVEE 422 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 RI+ G + P S A+ E + + +D P Sbjct: 423 -VRAFCALADRIYKDFGFTYSI-KLALRPEKRFGSDAMWDQAE-NELRDAVAAAGLDTPE 479 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + A YA + H L D++ +V + Sbjct: 480 YG-----------WEELPGEGAFYAPKLEWH---LTDAIGRTWQVGTIQSDRVLP----- 520 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + A++ G DG+ H + G+ ++ + G+ +W V ++ Sbjct: 521 ---ERLDASYVGEDGERHRPVMLHRAIFGSYERFIGILIEHYAGRFPLWLAPVQAVVATI 577 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + ++ +L G D E+I + L P ++VG + Sbjct: 578 V------SDADGYAIEVAEKLRAAGIRAETDLRNEKINYKVREHSLAKVPNLLVVGRREA 631 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHR 441 + V ++ + +S+++VI + Sbjct: 632 DEGTVALRELGKEGQSVLSVDDVIARLAKE 661 >gi|217964534|ref|YP_002350212.1| prolyl-tRNA synthetase [Listeria monocytogenes HCC23] gi|254782905|sp|B8DG08|SYP_LISMH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|217333804|gb|ACK39598.1| prolyl-tRNA synthetase [Listeria monocytogenes HCC23] gi|307570900|emb|CAR84079.1| proS [Listeria monocytogenes L99] Length = 568 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 124/294 (42%), Positives = 167/294 (56%), Gaps = 5/294 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E YN M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--- 237 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D+ +E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYSD-ASDYAANTEMAPVL 239 Query: 238 -DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 L +E+ P + E L + + + ++ I Sbjct: 240 YMEKKSHELEKELEKVATPDQKSIADIVEFLEVPIEKTMKSMLYQVDEEVIMVL 293 Score = 163 bits (412), Expect = 7e-38, Method: Composition-based stats. Identities = 65/180 (36%), Positives = 100/180 (55%), Gaps = 3/180 (1%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ ++ D P+ + V GIEVGHIF GTKYS M+AT +G+ + MG YG Sbjct: 383 DLRMIQVGDLSPDGQGVIKFAEGIEVGHIFKLGTKYSQAMNATILDENGRAQPIIMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R+++A+ E S+D G +W ++PF + LI + + E +Y L G Sbjct: 443 IGVSRILSAIAEQSNDENGFVWDKQISPFDLHLIPVNMKSEEQVAFAETLYTSLQGAGFS 502 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G +FA ADL+G P+++ VG K ++ VE+K R TG ++ +E++N Sbjct: 503 VLIDDRAERAGVKFADADLIGLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDELLNTL 561 >gi|206896471|ref|YP_002247167.1| threonyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265] gi|206739088|gb|ACI18166.1| threonyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265] Length = 632 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 82/444 (18%), Positives = 158/444 (35%), Gaps = 40/444 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 FL L+E R D +L L + I++ G+ W P G + R+ Sbjct: 221 FLHNLEEAERRDHRKLGKQLDLFS--INEDIGPGLILWHPNGAVIRKEIEDFWRQSHIDN 278 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + LW SG Y + M + +++ + P + I+++ +S Sbjct: 279 GYQLVYTPHVARTKLWEISGHLSFYKENMFPSMELENQSYLVKPMNCPFHVQIYKTKTRS 338 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 Y+ LP F ++ +R E G++R R F DA+ F + + K+ L Sbjct: 339 YKELPIRFAELGTVYRFERSGVLHGLLRVRGFTQDDAHIFCAREQVEEEV-EKVLDMALG 397 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I+ G + DL E V + + D + + + Sbjct: 398 IYRLFGFE-------------DLRIELSVRDPKNKDKYVGDDDVWELAESALSGALKARD 444 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 ++ E Y D+ K+ D+L + ++ F ++++ + Sbjct: 445 LDFTVAEGEAKFYGPAIDI---KVKDALGRYWQGPTIQVD----FNLPRRFNM----KYT 493 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG +H + +G++ A++ + G +W + + + Sbjct: 494 GQDGLEHEPVMIHRALLGSLERFFALLIEQYSGWFPLWVAPEQVRILPIT------EDQM 547 Query: 363 DACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + L + V D D G ++G + P ++VGSK V V ++H Sbjct: 548 QYAQSVAEGLKE--FRVKLDTDTGSKLGYRIRRGQTEKVPYMLVVGSKEVESGVVSVRHG 605 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + G MSL+E + N Sbjct: 606 VKGDLGQMSLDEFKSMIKEEIENK 629 >gi|218768358|ref|YP_002342870.1| prolyl-tRNA synthetase [Neisseria meningitidis Z2491] gi|81857470|sp|Q9JU09|SYP_NEIMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|121052366|emb|CAM08698.1| prolyl-tRNA synthetase [Neisseria meningitidis Z2491] Length = 570 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 164/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL+ P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANVE 234 Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 103/196 (52%), Gaps = 3/196 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A D+ N D P+ + ARGIEVGH+F KY+ M+ +F +GK Sbjct: 374 GRDAAEPEFVDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGK 433 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 ++MG YGIG RVVAA IE ++D KGIIW ++A F++ ++ + R+A +K Sbjct: 434 SQIMEMGCYGIGITRVVAAAIEQNNDEKGIIWTKAMASFEVVIVPMNYKKSDTVREAADK 493 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 IYA L G DV DD E+ G ++LLG P ++++G + + + VE R + Sbjct: 494 IYAELLAAGADVLLDDRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRDNEAQ 553 Query: 428 DMSLEEVINYASHRFS 443 +++ E++ + + Sbjct: 554 AIAIGEIVARVTASLN 569 >gi|307309192|ref|ZP_07588863.1| threonyl-tRNA synthetase [Sinorhizobium meliloti BL225C] gi|306900338|gb|EFN30954.1| threonyl-tRNA synthetase [Sinorhizobium meliloti BL225C] Length = 660 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 79/444 (17%), Positives = 146/444 (32%), Gaps = 39/444 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD ++ L + G+ W G + ++ A +R Sbjct: 233 QYLHVLAEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHGKGWRIFQSLVAYMRRRLE-G 289 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIFR 119 E++ P + LW SG + Y M ++ +D+ P + IF+ Sbjct: 290 DYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHIQIFK 349 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 +KSYR LP + R E G+MR R F DA+ F + + Sbjct: 350 HGLKSYRELPVRLAEFGAVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKIN- 408 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L ++ G K I ++ + P S E A+ T+V + + T Sbjct: 409 DLILSVYEDFGFKEIVVKLSTRPEKRVGSDELWDRAEAVMTEVL--QTIEEQSEGRIKTG 466 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + A Y + L D++ + ++ FG Sbjct: 467 I---------LPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------- 507 Query: 299 SATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 A + K V + G+M ++ ++ G +W + + Sbjct: 508 -AFYIDSESEKRQPVMIHRAICGSMERFLGILLENYAGHMPLW------ISPLQVVVATI 560 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D ++ RL G V D E+I + + P+ V+ G + + V Sbjct: 561 TSEADDYGREVAERLRDAGLTVETDFRNEKINYKVREHSVTKVPVIVVCGRREAEERSVN 620 Query: 418 IKHRLTGIREDMSLEEVINYASHR 441 I+ + + MSL+E + S Sbjct: 621 IRRLGSQAQTAMSLDEAVASLSAE 644 >gi|307321522|ref|ZP_07600917.1| threonyl-tRNA synthetase [Sinorhizobium meliloti AK83] gi|306892829|gb|EFN23620.1| threonyl-tRNA synthetase [Sinorhizobium meliloti AK83] Length = 660 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 79/444 (17%), Positives = 146/444 (32%), Gaps = 39/444 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD ++ L + G+ W G + ++ A +R Sbjct: 233 QYLHVLAEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHGKGWRIFQSLVAYMRRRLE-G 289 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIFR 119 E++ P + LW SG + Y M ++ +D+ P + IF+ Sbjct: 290 DYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHIQIFK 349 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 +KSYR LP + R E G+MR R F DA+ F + + Sbjct: 350 HGLKSYRELPVRLAEFGAVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKIN- 408 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L ++ G K I ++ + P S E A+ T+V + + T Sbjct: 409 DLILSVYEDFGFKEIVVKLSTRPEKRVGSDELWDRAEAVMTEVL--QTIEEQSEGRIKTG 466 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + A Y + L D++ + ++ FG Sbjct: 467 I---------LPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------- 507 Query: 299 SATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 A + K V + G+M ++ ++ G +W + + Sbjct: 508 -AFYIDSESEKRQPVMIHRAICGSMERFLGILLENYAGHMPLW------ISPLQVVVATI 560 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D ++ RL G V D E+I + + P+ V+ G + + V Sbjct: 561 TSEADDYGREVAERLRDAGLTVETDFRNEKINYKVREHSVTKVPVIVVCGRREAEERSVN 620 Query: 418 IKHRLTGIREDMSLEEVINYASHR 441 I+ + + MSL+E + S Sbjct: 621 IRRLGSQAQTAMSLDEAVASLSAE 644 >gi|157964288|ref|YP_001499112.1| threonyl-tRNA synthetase [Rickettsia massiliae MTU5] gi|157844064|gb|ABV84565.1| Threonyl-tRNA synthetase [Rickettsia massiliae MTU5] Length = 651 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 73/438 (16%), Positives = 153/438 (34%), Gaps = 40/438 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y L + + RD +L L + ++G+ W G + + IR++ + G Sbjct: 247 YLLMLEEAEKRDHRKLGRELDLF--HFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNG 304 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L LW SG + + +M + + +DK + P + IF+ IKSY Sbjct: 305 YTEVKTPVLVDKSLWEVSGHWAKFRDDMF-VLETDDKTLALKPMNCPCHVQIFKQGIKSY 363 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + L R+E G+MR R + DA+ F + + + + + Sbjct: 364 RDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETVSF-CKLLTEV 422 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P S E D + + Sbjct: 423 YKDFGFTDIKVKFSDRPEVRAGSDE-----------------VWDKAENALKEAVEQAGF 465 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ A Y + L D++ + ++ F + + A++ Sbjct: 466 TYTLNPGEGAFYGPKLEF---VLTDAIGRQWQCGTLQMD----FVLPER----LDASYVA 514 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 A G+ + +G++ ++ + G+ +W + I D Sbjct: 515 ASGEKKRPVMLHRAILGSLERFIGILIEEYAGRFPLW------LAPVQVAIATITSDLND 568 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L G ++ ++I + P+ ++G + + +V I+ T Sbjct: 569 YALEVQKALIDNGVRTDFNISPDKINYKIREFSNQKIPMIAVIGKQEQENKQVAIRRLGT 628 Query: 424 GIREDMSLEEVINYASHR 441 +E +S+E++I Sbjct: 629 TDQEVLSVEQLIAVVKEE 646 >gi|47096944|ref|ZP_00234521.1| prolyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] gi|47014704|gb|EAL05660.1| prolyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] Length = 502 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 124/294 (42%), Positives = 167/294 (56%), Gaps = 5/294 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E YN M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--- 237 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D+ +E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYSD-ASDYAANTEMAPVL 239 Query: 238 -DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 L +E+ P + E L + + + ++ I Sbjct: 240 YMEKKSHELEKDLEKVATPDQKSITDIVEFLEVPIEKTMKSMLYQVDDEVIMVL 293 Score = 80.9 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 2/120 (1%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ ++ D P+ + V GIEVGHIF GTKYS M+AT +G+ + MG YG Sbjct: 383 DLRMIQVGDLSPDGQGVIKFAEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R+++A+ E S+D G +W ++PF + LI + + E +Y L G Sbjct: 443 IGVSRILSAIAEQSNDENGFVWDKQISPFDLHLIPVNMKSEEQVAFAETLYTSLQDAGFS 502 >gi|154706797|ref|YP_001424763.1| threonyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111] gi|154356083|gb|ABS77545.1| threonyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111] Length = 660 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 83/447 (18%), Positives = 146/447 (32%), Gaps = 41/447 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K +L L+E RD + + K+ L S G W P G + + IR Sbjct: 235 KALKAYLYRLEEAEKRDHRLLAKKMDLF--HFQPESPGNVFWHPNGWSIILQMREYIRHI 292 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G E+ P L A LW +SG +G ++ L + + P IF Sbjct: 293 THKYGYQEVHTPQLIDASLWDKSGHLGKFGDDIFSLPLEP-QQYVIKPMSCPAHVQIFNQ 351 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + + R+E G+MR R F+ DA+ F + + Sbjct: 352 GVKSYRDLPLRYAEFGACHRNEPSGTLHGLMRLRGFVQDDAHIFCTEDQIQSE-VSAFID 410 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + + + P S E A+ + K +P E Sbjct: 411 QLHEVYADFGFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEALNRKGVEWDILPGE---- 466 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 A Y + L D L + ++ G Sbjct: 467 -------------GAFYGPKIEF---SLRDCLGRIWQCGTVQVDFSVPERLG-------- 502 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + DG + +G+ ++ GK +W V +++ Sbjct: 503 AHYIAEDGSKKPPVMIHRAILGSFERFLGILLEESAGKLPLWLAPVQVVVMNIT------ 556 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D + L +G D E+IG + + P V++G + V+D + + Sbjct: 557 DRQADYVGQTVENLQNLGIRAHSDLRNEKIGFKIREHTIARVPYLVVIGDREVADKTLSV 616 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + ++LEE S Sbjct: 617 RALEDEASTTITLEEFARQLKAEISQR 643 >gi|319902630|ref|YP_004162358.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Bacteroides helcogenes P 36-108] gi|319417661|gb|ADV44772.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Bacteroides helcogenes P 36-108] Length = 646 Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 149/445 (33%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L KG+ WLP G + +R Q R Sbjct: 230 EYLVLLEEAKKRDHRKIGKEMDLFM-FSDTVGKGLPMWLPKGTALRIRLQDFLRRIQARY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + L++ SG Y YGK+ + + P + I+++ Sbjct: 289 DYQEVMCPPIGNKLLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F + + ++ Sbjct: 349 RSYKDLPLRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDE-FLRVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + ++ + D + D + + Sbjct: 408 SIVFQSMDFENFEAQISLR--------------DKVNRDKYIGSDENWEKAEQAIIEACE 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + +E A Y D + D++ ++ ++ Sbjct: 454 EKGLKARIEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFQL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GAD + H + G+M AV+ GK +W + I + Sbjct: 503 EYTGADNQKHRPVMVHRAPFGSMERFVAVLIEHTAGKFPLW------LTPDQVAILPISE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D +++ L K D+ E+IG + ++ P ++VG K + ++ ++ Sbjct: 557 KFNDYAQEVKLFLKKYDIRAIVDERNEKIGRKIRDNEMKRIPYMLVVGEKEAENKEIAVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M +EE S N Sbjct: 617 KQGEGDKGTMKIEEFAKKISEEVQN 641 >gi|319795456|ref|YP_004157096.1| prolyL-tRNA synthetase [Variovorax paradoxus EPS] gi|315597919|gb|ADU38985.1| prolyl-tRNA synthetase [Variovorax paradoxus EPS] Length = 581 Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 119/237 (50%), Positives = 163/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ASH+LM+R GMI + GIY+++P+G + + V AI+REE Sbjct: 1 MKASRFFVSTLKEAPADAEVASHRLMMRAGMIKKLGTGIYTYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+++P +Q A+ W E+GR++ G E+LR+ DR+D+ + PT EEV+TDI R Sbjct: 61 MNRAGAIELTMPVVQPAEFWQETGRFEKMGPELLRIKDRHDRDFVIQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE RPRFG+MR REF+MKDAYSFD + +K SY M + Sbjct: 121 EIRSYKQLPKNFYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDLDAAKASYQIMAQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF R GL+ + A+SG IGGDLS EF V+A TGE + D ++ E Sbjct: 181 YRNIFDRFGLRYRAVAADSGAIGGDLSEEFQVIAATGEDAIVYCPD-SNYAANMEKA 236 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 67/188 (35%), Positives = 108/188 (57%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D+ P+ K V RGIEVGH+F GTKYS M+AT+ GK +++MG Sbjct: 393 VADLRNVVAGDASPDGKGVLAIERGIEVGHVFVLGTKYSKDMNATYLDEGGKPQFLEMGC 452 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKV 375 YGIG R+ AA IE +HD +GIIWPD++APF + + I + + E +Y L Sbjct: 453 YGIGITRLPAAAIEQNHDERGIIWPDALAPFTVVVCPIGMDRSPEVKVSAEALYEELLAK 512 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD GE+ G+ FA +L+G P +V++ + + + ++E +HR + ++ Sbjct: 513 GVDVLLDDRGERPGAMFADWELIGVPHRVVISDRGLKEGQLEYQHRRDTAATKVPSADIA 572 Query: 436 NYASHRFS 443 ++ + + + Sbjct: 573 DFIAGKLA 580 >gi|319954103|ref|YP_004165370.1| ser-tRNA(thr) hydrolase ;threonyl-tRNA synthetase [Cellulophaga algicola DSM 14237] gi|319422763|gb|ADV49872.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Cellulophaga algicola DSM 14237] Length = 646 Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 74/437 (16%), Positives = 148/437 (33%), Gaps = 38/437 (8%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L T + +G+ WLP G + + +++ Q + G + P Sbjct: 238 AKQRDHRKLGKELELFT-FSAKVGQGLPLWLPKGAALRERLEDFLKKAQKKAGYEMVITP 296 Query: 73 TLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 + +L+V SG Y YG + + + D+ + P + +++ SY++LP Sbjct: 297 HIGQKELYVTSGHYAKYGADSFQPIKTPKMDEEFLLKPMNCPHHCEVYNFKPHSYKDLPK 356 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F + +R E G+ R R F DA+ F TP+ + + L + LG Sbjct: 357 RFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFC-TPDQLDEEFKNVIDLSLYVLGSLG 415 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + D + + + S + LN ++ Sbjct: 416 FDNFTAQVSVR--------------DLTKPEKYIGSVENWEKAESAIINAATEKGLNFVI 461 Query: 250 E-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 E A Y D + D+L ++ ++ T+KG+D + Sbjct: 462 ESGEAAFYGPKLDFM---VKDALGRQWQLGTIQVDYNLP--------ERFDLTYKGSDNE 510 Query: 309 DHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 H + G+M A++ G +W I + EK Sbjct: 511 LHRPVMIHRAPFGSMERFIALLLEHTGGNFPLW------LIPEQAIILPVSEKHEKYAEK 564 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + L K D E +G + A++ P +IVG ++ + ++ Sbjct: 565 VLKSLEKHEIRALVDKRNETVGKKIREAEMNKLPFMLIVGENEEAEETISVRRHGGEDLG 624 Query: 428 DMSLEEVINYASHRFSN 444 +++ + + ++ Sbjct: 625 SITISDFNELVTTEINS 641 >gi|219113189|ref|XP_002186178.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|209583028|gb|ACI65648.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 684 Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 81/438 (18%), Positives = 162/438 (36%), Gaps = 39/438 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQN 62 K + +L+E RD + KL L + I + G+ W P G K + ++ Sbjct: 258 KQYKKMLEEAKKRDHRMLGKKLDLFS--IQEDAGGGLVFWHPKGSKVRRMIEDFWKDAHI 315 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G + P + + DLW SG +D Y +M D ++ P + +++ + Sbjct: 316 QDGYDVVYSPHIANIDLWKTSGHFDFYRADMFDQMDVENEQYQIKPMNCPFHCLMYKDEL 375 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LPF + ++ +R E G+MR R F DA+ F L + + Sbjct: 376 RSYRDLPFRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLQDEIV-GVLDLT 434 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I R G + + P S E D + Sbjct: 435 ETILSRFGFDKYDVMLSTRPEKSVGSDE-----------------IWDAATVALEGALKV 477 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 ++ E A Y D+ K+ D++ + S + FG +Y+ Sbjct: 478 KGWDYNVDEGGGAFYGPKIDL---KIRDAIGRQWQCSTVQCDFNLPERFGLEYA------ 528 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 ++ + + G++ ++ + +P +AP ++ L+ + Sbjct: 529 -SADGTRERPIMVHRAIFGSIERFFGILI---ENCSGDFPLWLAPTQLKLLPVT---DAV 581 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + C +I A+ K+G + D E++ Q A+ P+ +VG K + + + ++ R Sbjct: 582 HEYCNEIAAKALKMGLRIEVDRGSERLAKQIRNAEQARIPVMAVVGMKEMESNSLAVRSR 641 Query: 422 LTGIREDMSLEEVINYAS 439 G +E++++ Sbjct: 642 KLGDLGSFEVEDLLSELK 659 >gi|317164487|gb|ADV08028.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107] Length = 599 Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 116/235 (49%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 30 MKASQFFISTLKEAPAEAAFASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 89 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+++ GPT EEV+ DI R Sbjct: 90 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHERDFCMGPTCEEVIADIVRK 149 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 150 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQATYDAMYDA 209 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 210 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIE 263 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 7/229 (3%) Query: 222 FCSKDFMDFPIPSENTDFDDIISLNSIVEQW----TAPYAATSDVHNEKLFDSLPEN--K 275 F K + DF + + A D+ N D P+ + Sbjct: 370 FTGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEFVDLRNVVEGDESPDGQGR 429 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D Sbjct: 430 LKLARGIEVGHVFQLRGKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDE 489 Query: 336 KGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KGIIW ++APF++ ++ + R+A ++IYA L G DV DD E+ G Sbjct: 490 KGIIWTKAMAPFEVVIVPMNYKKSDTVREAADRIYAELLAAGADVLLDDRDERAGVLLND 549 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 ++LLG P ++++G + + + VE R + +++ E++ + + Sbjct: 550 SELLGIPHRIVIGDRALKEGNVEYAERRDNEAQAVAIGEIVARVTASLN 598 >gi|297808713|ref|XP_002872240.1| AT5g26830/F2P16_90 [Arabidopsis lyrata subsp. lyrata] gi|297318077|gb|EFH48499.1| AT5g26830/F2P16_90 [Arabidopsis lyrata subsp. lyrata] Length = 713 Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 78/445 (17%), Positives = 161/445 (36%), Gaps = 39/445 (8%) Query: 2 RRSKYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E + D + K L HQ S G Y +LPLG + + + I+++ Sbjct: 304 KQLKKYLQFLEEAKKYDHRLLGQKQELF--FSHQLSPGSYFFLPLGTRVYNRLMDFIKKQ 361 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + + LW SG D+Y M + + P + IF+ Sbjct: 362 YWQRGYTEVITPNMYNMALWETSGHADNYKDNMFTF-NIEKQEFGLKPMNCPGHCLIFQH 420 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 ++SYR LP + R+E G+ R R F DA+ F T + + + Sbjct: 421 RVRSYRELPMRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTTEQVKEE-VQGVLE 479 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G ++ + P + + D Sbjct: 480 FIDYVYKVFGFTY-ELKLSTRP-----------------EKYLGELETWDKAEADLKEAI 521 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + E A Y D+ + D++ + + ++ F +++L + Sbjct: 522 EAFGKPLVLNEGDGAFYGPKIDI---TVSDAMNRKFQCATLQLD----FQLPIRFNLEYA 574 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A K V + +G++ + A++ + WP ++P + + I Q Sbjct: 575 AE--DEAKKAKPVMIHRAVLGSVERMFAILL---EHYKGKWPFWISPRQAIVCPISEKSQ 629 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 EK+ + G + D +I + A L + ++VG + +V ++ Sbjct: 630 ---KYAEKVQKEIHDAGFYIDADLTDRKIDKKVREAQLAQYNYILVVGETEAATGQVSVR 686 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 R + S+E+++ + + Sbjct: 687 LRDSAAHSVKSIEDLLEEFKAKIAE 711 >gi|288928013|ref|ZP_06421860.1| threonine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108] gi|288330847|gb|EFC69431.1| threonine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108] Length = 654 Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 75/444 (16%), Positives = 148/444 (33%), Gaps = 36/444 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L + KG+ WLP G + + ++R+ Q R Sbjct: 232 EYLVMLEEAKKRDHRKIGKEMELFM-FSERVGKGLPIWLPKGTELRLRLQNMLRKIQKRF 290 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P + S +L+V SG Y YGK+ + D+ + P + ++F Sbjct: 291 GYQEVITPHIGSKNLYVTSGHYAHYGKDSFQPIHTPEEDEEYMLKPMNCPHHCEVFAWKP 350 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + +R E G+ R R F DA+ F + + ++ Sbjct: 351 RSYKDLPLRIAEFGTVYRYEKSGELHGLTRVRSFTQDDAHIFCRPEQVKNE-FLRVMDII 409 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + T+ S + + + + Sbjct: 410 QAVFKIFHFDDFEAQISLRD-------------PKNTTKYIGSDEVWEESEQAIIDACKE 456 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I A Y D + D++ ++ ++ Sbjct: 457 KGLDAKIAYGEAAFYGPKLDFM---IKDAIGRRWQLGTIQVDYNLP--------ERFKLE 505 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + G+M AV+ G +W + I + Sbjct: 506 YTAEDNTKKTPVMVHRAPFGSMERFTAVLIEHTAGHFPLW------LIPDQVAILPISEK 559 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +++ VG D E+IG + ++ P V+VG K ++ V ++ Sbjct: 560 YNDYAQRVAKYFDSVGVRATLDVRNEKIGRKIRDNEIKRVPYMVVVGEKEAAEGLVSMRK 619 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 + G + MS+EE + + Sbjct: 620 QGGGEQATMSMEEFAKRINDEVAT 643 >gi|240013893|ref|ZP_04720806.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae DGI18] gi|240016334|ref|ZP_04722874.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae FA6140] gi|240121462|ref|ZP_04734424.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1] gi|260440251|ref|ZP_05794067.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae DGI2] Length = 570 Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 116/235 (49%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAAFASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+++ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHERDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQATYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIE 234 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 7/229 (3%) Query: 222 FCSKDFMDFPIPSENTDFDDIISLNSIVEQW----TAPYAATSDVHNEKLFDSLPEN--K 275 F K + DF + + A D+ N D P+ + Sbjct: 341 FTGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEFVDLRNVVEGDESPDGQGR 400 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D Sbjct: 401 LKLARGIEVGHVFQLRGKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDE 460 Query: 336 KGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KGIIW ++APF++ ++ + R+A ++IYA L G DV DD E+ G Sbjct: 461 KGIIWTKAMAPFEVVIVPMNYKKSDTVREAADRIYAELLAAGADVLLDDRDERAGVLLND 520 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 ++LLG P ++++G + + + VE R + +++ E++ + + Sbjct: 521 SELLGIPHRIVIGDRALKEGNVEYAERRGNEAQAVAIGEIVARVTASLN 569 >gi|194098918|ref|YP_002001983.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945] gi|291043544|ref|ZP_06569260.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae DGI2] gi|293398861|ref|ZP_06643026.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae F62] gi|193934208|gb|ACF30032.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945] gi|291012007|gb|EFE03996.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae DGI2] gi|291610275|gb|EFF39385.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae F62] Length = 599 Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 116/235 (49%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 30 MKASQFFISTLKEAPAEAAFASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 89 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+++ GPT EEV+ DI R Sbjct: 90 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHERDFCMGPTCEEVIADIVRK 149 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 150 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQATYDAMYDA 209 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 210 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIE 263 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 7/229 (3%) Query: 222 FCSKDFMDFPIPSENTDFDDIISLNSIVEQW----TAPYAATSDVHNEKLFDSLPEN--K 275 F K + DF + + A D+ N D P+ + Sbjct: 370 FTGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEFVDLRNVVEGDESPDGQGR 429 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D Sbjct: 430 LKLARGIEVGHVFQLRGKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDE 489 Query: 336 KGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KGIIW ++APF++ ++ + R+A ++IYA L G DV DD E+ G Sbjct: 490 KGIIWTKAMAPFEVVIVPMNYKKSDTVREAADRIYAELLAAGADVLLDDRDERAGVLLND 549 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 ++LLG P ++++G + + + VE R + +++ E++ + + Sbjct: 550 SELLGIPHRIVIGDRALKEGNVEYAERRGNEAQAVAIGEIVARVTASLN 598 >gi|28899107|ref|NP_798712.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633] gi|260364768|ref|ZP_05777355.1| proline--tRNA ligase [Vibrio parahaemolyticus K5030] gi|260876810|ref|ZP_05889165.1| proline--tRNA ligase [Vibrio parahaemolyticus AN-5034] gi|260895895|ref|ZP_05904391.1| proline--tRNA ligase [Vibrio parahaemolyticus Peru-466] gi|81839761|sp|Q87MC3|SYP_VIBPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|28807331|dbj|BAC60596.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633] gi|308089375|gb|EFO39070.1| proline--tRNA ligase [Vibrio parahaemolyticus Peru-466] gi|308091476|gb|EFO41171.1| proline--tRNA ligase [Vibrio parahaemolyticus AN-5034] gi|308115298|gb|EFO52838.1| proline--tRNA ligase [Vibrio parahaemolyticus K5030] gi|328474355|gb|EGF45160.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus 10329] Length = 571 Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 112/237 (47%), Positives = 150/237 (63%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHVRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL+ P+ A+SG IGG S EF VLAD+GE + D+ E Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLADSGEDLIAF-STESDYAANIEKA 236 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 65/190 (34%), Positives = 111/190 (58%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N D + + RGIEVGHIF G YS M+ + G DGK+ ++M Sbjct: 382 GQVEDLRNVVEGDPSPCGKGTLMLKRGIEVGHIFQLGNVYSEAMNCSVLGPDGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVA+ IE +HD GIIWPD++APF+++++ + + ++A EK+YA L+ Sbjct: 442 GCYGIGVSRVVASAIEQNHDKYGIIWPDAIAPFQVAIVPMNMHKSERVKEAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G +V +DD E+ G F+ +L+G P +++G + + + E K+R TG + +++ + Sbjct: 502 AMGIEVLFDDRKERPGVMFSDIELIGIPHTIVIGDRSMDEGNFEYKNRRTGEKTPVAMAD 561 Query: 434 VINYASHRFS 443 ++ + + Sbjct: 562 IVEHVKSQLK 571 >gi|15640891|ref|NP_230522.1| prolyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121585725|ref|ZP_01675520.1| prolyl-tRNA synthetase [Vibrio cholerae 2740-80] gi|121728341|ref|ZP_01681371.1| prolyl-tRNA synthetase [Vibrio cholerae V52] gi|147673158|ref|YP_001216355.1| prolyl-tRNA synthetase [Vibrio cholerae O395] gi|153819016|ref|ZP_01971683.1| prolyl-tRNA synthetase [Vibrio cholerae NCTC 8457] gi|153823083|ref|ZP_01975750.1| prolyl-tRNA synthetase [Vibrio cholerae B33] gi|227081051|ref|YP_002809602.1| prolyl-tRNA synthetase [Vibrio cholerae M66-2] gi|229505518|ref|ZP_04395028.1| prolyl-tRNA synthetase [Vibrio cholerae BX 330286] gi|229510812|ref|ZP_04400291.1| prolyl-tRNA synthetase [Vibrio cholerae B33] gi|229517932|ref|ZP_04407376.1| prolyl-tRNA synthetase [Vibrio cholerae RC9] gi|229608537|ref|YP_002879185.1| prolyl-tRNA synthetase [Vibrio cholerae MJ-1236] gi|254848011|ref|ZP_05237361.1| prolyl-tRNA synthetase [Vibrio cholerae MO10] gi|255744669|ref|ZP_05418620.1| prolyl-tRNA synthetase [Vibrio cholera CIRS 101] gi|262161198|ref|ZP_06030309.1| prolyl-tRNA synthetase [Vibrio cholerae INDRE 91/1] gi|262168701|ref|ZP_06036396.1| prolyl-tRNA synthetase [Vibrio cholerae RC27] gi|81858145|sp|Q9KTM7|SYP_VIBCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|172047427|sp|A5F340|SYP_VIBC3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782925|sp|C3LTC5|SYP_VIBCM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|9655329|gb|AAF94037.1| prolyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121550088|gb|EAX60104.1| prolyl-tRNA synthetase [Vibrio cholerae 2740-80] gi|121629396|gb|EAX61826.1| prolyl-tRNA synthetase [Vibrio cholerae V52] gi|126510449|gb|EAZ73043.1| prolyl-tRNA synthetase [Vibrio cholerae NCTC 8457] gi|126519409|gb|EAZ76632.1| prolyl-tRNA synthetase [Vibrio cholerae B33] gi|146315041|gb|ABQ19580.1| prolyl-tRNA synthetase [Vibrio cholerae O395] gi|227008939|gb|ACP05151.1| prolyl-tRNA synthetase [Vibrio cholerae M66-2] gi|227012695|gb|ACP08905.1| prolyl-tRNA synthetase [Vibrio cholerae O395] gi|229344647|gb|EEO09621.1| prolyl-tRNA synthetase [Vibrio cholerae RC9] gi|229350777|gb|EEO15718.1| prolyl-tRNA synthetase [Vibrio cholerae B33] gi|229357741|gb|EEO22658.1| prolyl-tRNA synthetase [Vibrio cholerae BX 330286] gi|229371192|gb|ACQ61615.1| prolyl-tRNA synthetase [Vibrio cholerae MJ-1236] gi|254843716|gb|EET22130.1| prolyl-tRNA synthetase [Vibrio cholerae MO10] gi|255737700|gb|EET93094.1| prolyl-tRNA synthetase [Vibrio cholera CIRS 101] gi|262022819|gb|EEY41525.1| prolyl-tRNA synthetase [Vibrio cholerae RC27] gi|262028948|gb|EEY47601.1| prolyl-tRNA synthetase [Vibrio cholerae INDRE 91/1] Length = 571 Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 114/237 (48%), Positives = 153/237 (64%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M V+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYEAMHVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL P+ A++G IGG+ SHEF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 68/190 (35%), Positives = 111/190 (58%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N D + + RGIEVGHIF GT YS M+ ++GK+ ++M Sbjct: 382 GKVEDLRNVVEGDPSPCGKGTLMLKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVAA IE +HD GIIWPD++APF+++++ + + + A EK+YA L+ Sbjct: 442 GCYGIGVSRVVAAAIEQNHDDYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G +V +DD E+ G F+ +L+G P +I+G + + + E K+R G +E +++E Sbjct: 502 AAGIEVLFDDRKERPGVMFSDMELIGVPHTIIIGDRSMDEGHFEYKNRRQGEKEAVAMES 561 Query: 434 VINYASHRFS 443 +I++ + + Sbjct: 562 IIDFIQAKLA 571 >gi|300812909|ref|ZP_07093302.1| threonine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496107|gb|EFK31236.1| threonine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 643 Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 75/433 (17%), Positives = 154/433 (35%), Gaps = 34/433 (7%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L L + + G+ W+P G + I +++ G + P L Sbjct: 238 RDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRIIERYIVDKEVAAGYQHVYTPVL 295 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y ++M D + M P + I++ HI+SYR LP Sbjct: 296 MNLDAYKTSGHWAHYREDMFPPMDMGEGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIA 355 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + + + + ++H + Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEE-FARTLQIIMDVYHDFDIND 414 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + F + + + DD+ E Sbjct: 415 YYFRLS-------------YRDPKNTDKYFANDEMWERSQSMLKAAMDDMGLDYVEAEGE 461 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ ++ GADG++H Sbjct: 462 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----ELSYIGADGEEHRP 510 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 M G + + I + +P +AP + +I + D +K+ L Sbjct: 511 VMIHR--GIVGTMERFIAYLTEIYKGAFPTWLAPVQAEIIPVNL--DAHSDYAKKVRDEL 566 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G D E++G + + P +++G ++ V ++ T + SL Sbjct: 567 VAKGFRAEIDFRNEKLGYKIRESQTQKVPYTLVLGDDEMNAGTVNVRPYGTEEQNSESLA 626 Query: 433 EVINYASHRFSNN 445 E ++ S ++ Sbjct: 627 EFMDKLSKDVASY 639 >gi|15081626|gb|AAK82468.1| AT5g26830/F2P16_90 [Arabidopsis thaliana] gi|29028762|gb|AAO64760.1| At5g26830/F2P16_90 [Arabidopsis thaliana] Length = 676 Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 158/442 (35%), Gaps = 39/442 (8%) Query: 2 RRSKYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E + D + K L HQ S G Y +LPLG + + + I+ + Sbjct: 267 KQLKKYLQFLEEAKKYDHRLLGQKQELF--FSHQLSPGSYFFLPLGTRVYNRLMDFIKNQ 324 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E+ P + + +LW SG D+Y M + + P + IF+ Sbjct: 325 YWHRGYTEVITPNMYNMELWQTSGHADNYKDNMFTF-NIEKQEFGLKPMNCPGHCLIFQH 383 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 ++SYR LP + R+E G+ R R F DA+ F T + + Sbjct: 384 RVRSYRELPMRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTTEQVKGE-VQGVLE 442 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G ++ + P + + D Sbjct: 443 FIDYVYKVFGFTY-ELKLSTRP-----------------EKYLGDLETWDKAEADLKEAI 484 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + E A Y D+ + D++ + + ++ F +++L + Sbjct: 485 EAFGKPLVLNEGDGAFYGPKIDI---TVSDAMNRKFQCATLQLD----FQLPIRFNLEYA 537 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A K V + +G++ + A++ + WP ++P + + I Q Sbjct: 538 AE--DEAKKSRPVMIHRAVLGSVERMFAILL---EHYKGKWPFWISPRQAIVCPISEKSQ 592 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 EK+ ++ G V D +I + A L + ++VG + +V ++ Sbjct: 593 ---QYAEKVQKQIKDAGFYVDADLTDRKIDKKVREAQLAQYNYILVVGETEAATGQVSVR 649 Query: 420 HRLTGIREDMSLEEVINYASHR 441 R S+E+++ + Sbjct: 650 VRDNAAHSVKSIEDLLEEFKAK 671 >gi|307154337|ref|YP_003889721.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7822] gi|306984565|gb|ADN16446.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7822] Length = 600 Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 125/276 (45%), Positives = 161/276 (58%), Gaps = 7/276 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + GIY++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLREDPAEAEIKSHKLLLRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N GA E +P LQ ++LW ESGR+D+Y K M L DR ++ + GPTHEEV+T I Sbjct: 61 MNAIGAQECLLPQLQPSELWKESGRWDTYTKAEGIMFALGDRQERELGLGPTHEEVITFI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF K +Y M Sbjct: 121 AREMIRSYRQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHTDETSLKKTYQDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y +F R GL + A+SG IGG S EF+VLAD GE +V + D ++ E Sbjct: 181 DQAYRNMFRRCGLAFRGVEADSGAIGGSGSQEFMVLADAGEDEVLYTADG-NYAANVEKA 239 Query: 238 ---DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 D S E+ P T + E L S Sbjct: 240 VSLPPDVQASPFKSYEKRETPGTDTIEKLAEFLNCS 275 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 109/196 (55%), Gaps = 3/196 (1%) Query: 247 SIVEQWTAPYAATSDVHNEKLFDSL--PENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + +Q+ P ++ ++ P SARGIEVGHIF GTKYS M AT+ Sbjct: 400 NWGKQFKLPELVVDVRKAKQGDRAVHDPTQTLQSARGIEVGHIFQLGTKYSQAMGATYTN 459 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 G++ + MG YG+G R+ A +E S+D GIIWP ++AP+ ++ +D + + Sbjct: 460 EQGEEIPLVMGCYGMGVSRLAQAAVEQSYDKDGIIWPVAIAPYHAIVVIPDLNDPLQVET 519 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 EK+Y L++VG + DD + G +F ++L+G P +++ G + + D KVE+ R + Sbjct: 520 AEKLYQELNQVGVETLLDDRDARAGVKFKDSELIGIPYRIVTG-RSLKDGKVEVVERASK 578 Query: 425 IREDMSLEEVINYASH 440 +D+++EEV++ Sbjct: 579 KSQDIAIEEVVSTLQQ 594 >gi|229180095|ref|ZP_04307439.1| Prolyl-tRNA synthetase [Bacillus cereus 172560W] gi|228603304|gb|EEK60781.1| Prolyl-tRNA synthetase [Bacillus cereus 172560W] Length = 566 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 122/267 (45%), Positives = 166/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + E+ A E++ Sbjct: 240 ATYKKSDEAEKALEKVATPDQKAIEEV 266 Score = 166 bits (420), Expect = 7e-39, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|301066747|ref|YP_003788770.1| threonyl-tRNA synthetase [Lactobacillus casei str. Zhang] gi|300439154|gb|ADK18920.1| Threonyl-tRNA synthetase [Lactobacillus casei str. Zhang] Length = 657 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 84/446 (18%), Positives = 164/446 (36%), Gaps = 40/446 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + D + L L + + G+ W+P G + I +++ G Sbjct: 232 RRQEAAEHDHRVIGRDLDLF--FVDPKVGAGLPYWMPNGATIRRVIERYIIDKEIADGYE 289 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYR 126 + P L + DL+ SG +D Y ++M D D M P + I+ HI+SYR Sbjct: 290 HVYTPVLANLDLYKTSGHWDHYREDMFPPMDMGDGEMLELRPMNCPSHIQIYNHHIRSYR 349 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP ++ + R E G+ R RE + D ++F + + + K+ + ++ Sbjct: 350 ELPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEE-FKKILRLIMDVY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIIS 244 + R D T+ + D M S DD+ Sbjct: 409 EDFNITDYSFRLS--------------YRDPKNTEKYFDDDEMWTRSQSMLKGAMDDLKL 454 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y D+ + +L ++ +S ++ F ++ + T+ G Sbjct: 455 DYYEAEGEAAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----NLTYVG 503 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG++H M G + + I + +P +AP + LI + + + D Sbjct: 504 KDGEEHRPVMIHR--GIVGTMERFIAYLTEIYKGAFPTWLAPTQAVLIPVN--NDLHLDY 559 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT- 423 +I ++ G V DD E++G + A P V+VG K ++D+ V ++ Sbjct: 560 VNRIKKQMLAAGLRVKVDDRNEKMGYKIREAQTKKIPYTVVVGDKELNDAAVSVRRYGDE 619 Query: 424 ---GIREDMSLEEVINYASHRFSNNR 446 +M ++ ++ + + + Sbjct: 620 HTEEEAGNMFIDALVAEVKNYSRDGK 645 >gi|210633121|ref|ZP_03297688.1| hypothetical protein COLSTE_01601 [Collinsella stercoris DSM 13279] gi|210159275|gb|EEA90246.1| hypothetical protein COLSTE_01601 [Collinsella stercoris DSM 13279] Length = 569 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 110/227 (48%), Positives = 161/227 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + P L+E+P +AE+ASH+LMLR G+I + + G+YS+LPL ++L + I+R+E Sbjct: 1 MKMSKLYAPTLKEDPAEAELASHRLMLRAGLIRKQAAGLYSYLPLAWRSLRKIEDIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P + A +W ESGRY++YG E++R+ DR+D+ + GPTHEE +TD+ ++ Sbjct: 61 MDAAGAQELLMPIMVDAQVWRESGRYNAYGPELMRIDDRHDREFVLGPTHEETVTDLIKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF+ T E + +Y++M + Sbjct: 121 ELKSYKQLPVNLYQIQDKFRDEMRPRFGLMRGREFIMKDGYSFNATQESLQETYDEMKQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 Y I R GLK++P+ A+SG IGGD S EF+ LAD GE + Sbjct: 181 YANICERCGLKALPVVADSGQIGGDTSVEFMALADAGEAALVYCDAC 227 Score = 173 bits (439), Expect = 5e-41, Method: Composition-based stats. Identities = 71/191 (37%), Positives = 107/191 (56%), Gaps = 2/191 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 A D+ D P ARGIEV +F GTKYS M ATF +G++ MG Sbjct: 378 AWEDLITVIAGDPCPHCGASLAGARGIEVSQVFQLGTKYSEAMGATFADENGEEKPFLMG 437 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YG+G R +AA +E HDG GIIWP S+AP+++S++ + + C + C ++ L Sbjct: 438 CYGVGVSRTLAASVEQHHDGHGIIWPVSIAPYEVSIMPLDPTIEECAEVCARLTDELCAA 497 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD + G +FA DL+GFP Q+++G + + + VE+K R TG RED++++EV Sbjct: 498 GIEVIVDDRDIRPGVKFADNDLMGFPYQIVLGKRGLKNGTVELKDRATGEREDVAIDEVA 557 Query: 436 NYASHRFSNNR 446 + + R Sbjct: 558 AKVADLVISQR 568 >gi|191638692|ref|YP_001987858.1| threonyl-tRNA synthetase [Lactobacillus casei BL23] gi|239632065|ref|ZP_04675096.1| ser-tRNA(Thr) hydrolase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|238693055|sp|B3WF49|SYT_LACCB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|190712994|emb|CAQ67000.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS) [Lactobacillus casei BL23] gi|239526530|gb|EEQ65531.1| ser-tRNA(Thr) hydrolase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|327382733|gb|AEA54209.1| Threonyl-tRNA synthetase [Lactobacillus casei LC2W] gi|327385920|gb|AEA57394.1| Threonyl-tRNA synthetase [Lactobacillus casei BD-II] Length = 657 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 84/446 (18%), Positives = 164/446 (36%), Gaps = 40/446 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + D + L L + + G+ W+P G + I +++ G Sbjct: 232 RRQEAAEHDHRVIGRDLDLF--FVDPKVGAGLPYWMPNGATIRRVIERYIIDKEIADGYE 289 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYR 126 + P L + DL+ SG +D Y ++M D D M P + I+ HI+SYR Sbjct: 290 HVYTPVLANLDLYKTSGHWDHYREDMFPPMDMGDGEMLELRPMNCPSHIQIYNHHIRSYR 349 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP ++ + R E G+ R RE + D ++F + + + K+ + ++ Sbjct: 350 ELPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEE-FKKILRLIMDVY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIIS 244 + R D T+ + D M S DD+ Sbjct: 409 EDFNITDYSFRLS--------------YRDPKNTEKYFDDDEMWTRSQSMLKGAMDDLKL 454 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y D+ + +L ++ +S ++ F ++ + T+ G Sbjct: 455 DYYEAEGEAAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----NLTYVG 503 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG++H M G + + I + +P +AP + LI + + + D Sbjct: 504 KDGEEHRPVMIHR--GIVGTMERFIAYLTEIYKGAFPTWLAPTQAVLIPVN--NDLHLDY 559 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT- 423 +I ++ G V DD E++G + A P V+VG K ++D+ V ++ Sbjct: 560 VNRIKKQMLAAGLRVKVDDRNEKMGYKIREAQTKKIPYTVVVGDKELNDAAVSVRRYGDE 619 Query: 424 ---GIREDMSLEEVINYASHRFSNNR 446 +M ++ ++ + + + Sbjct: 620 HTEEEAGNMFIDALVAEVKNYSRDGK 645 >gi|116514446|ref|YP_813352.1| threonyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093761|gb|ABJ58914.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325126146|gb|ADY85476.1| Threonyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 643 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 76/433 (17%), Positives = 154/433 (35%), Gaps = 34/433 (7%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L L + + G+ W+P G + I +++ G + P L Sbjct: 238 RDHRTIGRDLDLF--FVDPKAGAGLPYWMPKGATIRRIIERYIVDKEVAAGYQHVYTPVL 295 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y ++M D + M P + I++ HI+SYR LP Sbjct: 296 MNLDAYKTSGHWAHYREDMFPPMDMGEGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIA 355 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + + + + ++H + Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEE-FARTLQIIMDVYHDFDIND 414 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + F + + + DD+ E Sbjct: 415 YYFRLS-------------YRDPKNTDKYFANDEMWERSQSMLKAAMDDMGLDYVEAEGE 461 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ ++ GADG++H Sbjct: 462 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----ELSYIGADGEEHRP 510 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 M G + + I + +P +AP + +I + D +K+ L Sbjct: 511 VMIHR--GIVGTMERFIAYLTEIYKGAFPTWLAPVQAEIIPVNL--DAHSDYAKKVRDEL 566 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G D E++G + + P +++G ++ V ++ T + SL Sbjct: 567 VAKGFRAEIDFRNEKLGYKIRESQTQKVPYTLVLGDDEMNAGTVNVRPYGTEEQNSESLA 626 Query: 433 EVINYASHRFSNN 445 E ++ S +N Sbjct: 627 EFMDKLSKDVANY 639 >gi|163803792|ref|ZP_02197646.1| prolyl-tRNA synthetase [Vibrio sp. AND4] gi|159172411|gb|EDP57283.1| prolyl-tRNA synthetase [Vibrio sp. AND4] Length = 571 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 112/237 (47%), Positives = 151/237 (63%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHTRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKEGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 169 bits (428), Expect = 9e-40, Method: Composition-based stats. Identities = 64/190 (33%), Positives = 110/190 (57%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N D + + RGIEVGHIF G YS M+ G DGK+ ++M Sbjct: 382 GQIEDLRNVVEGDPSPCGQGTLMLKRGIEVGHIFQLGNVYSQAMNCGVLGPDGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVA+ IE +HD GIIWPD++APF+++++ + + ++A EK+YA L+ Sbjct: 442 GCYGIGVSRVVASAIEQNHDKYGIIWPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G +V +DD E+ G F+ +L+G P +++G + + + E K+R +G + +++ + Sbjct: 502 AMGVEVLFDDRKERPGVMFSDMELIGIPHTIVIGDRSMKEGNFEYKNRRSGEKTAVAMTD 561 Query: 434 VINYASHRFS 443 ++ + + Sbjct: 562 IVEHVKAQLQ 571 >gi|300787200|ref|YP_003767491.1| threonyl-tRNA synthetase [Amycolatopsis mediterranei U32] gi|299796714|gb|ADJ47089.1| threonyl-tRNA synthetase [Amycolatopsis mediterranei U32] Length = 675 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 61/442 (13%), Positives = 129/442 (29%), Gaps = 36/442 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ + P G + R G Sbjct: 253 YLERIAEAERRDHRKLGAELDLFS-FPEEIGSGLPVFHPKGGIIRRELENYSRRRHEEAG 311 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 ++ P + +L+ SG Y M +++ + + IFRS +SY Sbjct: 312 YEFVNTPHISKGELFHTSGHLPYYADTMFPPVQFDEENYYLKAMNCPMHNLIFRSRGRSY 371 Query: 126 RNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP ++ +R E G+ R R M D++ + + + L + Sbjct: 372 RELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDSHIYCTKEQMPGEL-RSLLKFVLDL 430 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 GL + + E + + D Sbjct: 431 LADYGLSDFYLELSTRGDSDKFIGE---------------DWEWEEATETLRQAAVDSGL 475 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + + D++ ++S ++ + + Sbjct: 476 ELVPDPGGAAFYGPKI---SVQAKDAIGRTWQMSTIQLDFNQ--------NKRFGLEYTA 524 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + G++ V+ + +P ++P ++ I I + Sbjct: 525 PDGSRQTPVMIHRALFGSIERFFGVLT---EHYAGAFPAWLSPVQVVGIPIT---ADQVE 578 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L G D +++ + P ++ G+K V V + R Sbjct: 579 YLQDVEKALRAKGLRAEVDASDDRMQKKIRTHTTQKVPFMLLAGAKDVEAGAVSFRFRDG 638 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G + +E+ + + Sbjct: 639 GQINGVPVEKAVEAIAEWVERR 660 >gi|229013002|ref|ZP_04170167.1| Prolyl-tRNA synthetase [Bacillus mycoides DSM 2048] gi|228748256|gb|EEL98116.1| Prolyl-tRNA synthetase [Bacillus mycoides DSM 2048] Length = 566 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 122/267 (45%), Positives = 166/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+++LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQASELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y+ ++ + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYSGLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKALEKVATPDQKAIEEV 266 Score = 162 bits (410), Expect = 9e-38, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 106/190 (55%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTKPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP SVAPF + +I + R+ IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKSVAPFHVHVIPVNMKSDAQREMGGNIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|313124186|ref|YP_004034445.1| threonyl-tRNA synthetase 1 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280749|gb|ADQ61468.1| Threonyl-tRNA synthetase 1 [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 643 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 75/433 (17%), Positives = 154/433 (35%), Gaps = 34/433 (7%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L L + + G+ W+P G + I +++ G + P L Sbjct: 238 RDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRIIERYIVDKEVAAGYQHVYTPVL 295 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y ++M D + M P + I++ HI+SYR LP Sbjct: 296 MNLDAYKTSGHWAHYREDMFPPMDMGEGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIA 355 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + + + + ++H + Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEE-FARTLQIIMDVYHDFDIND 414 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + F + + + DD+ E Sbjct: 415 YYFRLS-------------YRDPKNTDKYFANDEMWERSQSMLKAAMDDMGLDYVEAEGE 461 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ ++ GADG++H Sbjct: 462 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----ELSYIGADGEEHRP 510 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 M G + + I + +P +AP + +I + D +K+ L Sbjct: 511 VMIHR--GIVGTMERFIAYLTEIYKGAFPTWLAPVQAEIIPVNL--DAHSDYAKKVRDEL 566 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G D E++G + + P +++G ++ V ++ T + SL Sbjct: 567 VAKGFRAEIDFRNEKLGYKIRESQTQKVPYTLVLGDDEMNAGTVNVRPYGTEEQNSESLA 626 Query: 433 EVINYASHRFSNN 445 E ++ S ++ Sbjct: 627 EFMDKLSKDVASY 639 >gi|317052052|ref|YP_004113168.1| prolyl-tRNA synthetase [Desulfurispirillum indicum S5] gi|316947136|gb|ADU66612.1| prolyl-tRNA synthetase [Desulfurispirillum indicum S5] Length = 572 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 118/238 (49%), Positives = 152/238 (63%), Gaps = 1/238 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ FL +E P DAE+ SH+LMLR G I + + GIYS+LPL + L + IIREE Sbjct: 1 MRYSQAFLFTAKETPSDAEVISHQLMLRGGYIKKTAAGIYSYLPLAWRVLRKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA E+ +P A+LW+ESGR+ YG E+LR DR+ + GPTHEE +TDI R Sbjct: 61 MTREGAEELMMPAALPAELWMESGRWQKYGPELLRFQDRHGRDFCIGPTHEEAITDIVRH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR+LP YQIQ KFRDE+RPRFG+MR REF+MKD YSFD+ E S +Y KM+ + Sbjct: 121 AVSSYRHLPKNLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFDVDDEASATTYEKMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 Y IF R GL + A+SG IGG SHEF+VLA++GE + + E Sbjct: 181 YSSIFRRCGLSFKAVEADSGQIGGSFSHEFMVLANSGEDGIASCSKCS-YAANLEKAF 237 Score = 146 bits (368), Expect = 8e-33, Method: Composition-based stats. Identities = 68/189 (35%), Positives = 100/189 (52%), Gaps = 4/189 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ D P + RGIEVGH+F GT YS M AT+ +GK+ + MG Sbjct: 378 RFADISTVIEGDCCPRCHSELNILRGIEVGHVFRLGTVYSQSMKATYLDRNGKEQPMVMG 437 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSK 374 YGIG R AA IE +HD KGIIWP S+AP+++ + + D+ R + +Y RL Sbjct: 438 CYGIGVGRTAAAAIEQNHDDKGIIWPMSIAPYQVVICTVNPSRDEQSRATADSLYERL-A 496 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 CDV +DD E+ G +F ++L+G PL++ + K + S VEI R +G + LE + Sbjct: 497 ATCDVLYDDRDERPGVKFIDSELIGIPLRLTISQKTLEQSSVEITIRKSGEKYLHPLETI 556 Query: 435 INYASHRFS 443 + Sbjct: 557 SEEVARLIQ 565 >gi|239999200|ref|ZP_04719124.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae 35/02] gi|240080454|ref|ZP_04724997.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae FA19] gi|240113176|ref|ZP_04727666.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae MS11] gi|240115935|ref|ZP_04729997.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID18] gi|240118232|ref|ZP_04732294.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID1] gi|240123781|ref|ZP_04736737.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID332] gi|240125970|ref|ZP_04738856.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] gi|240128484|ref|ZP_04741145.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] gi|254493969|ref|ZP_05107140.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae 1291] gi|268603943|ref|ZP_06138110.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID1] gi|268682406|ref|ZP_06149268.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID332] gi|268684564|ref|ZP_06151426.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] gi|226513009|gb|EEH62354.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae 1291] gi|268588074|gb|EEZ52750.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID1] gi|268622690|gb|EEZ55090.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID332] gi|268624848|gb|EEZ57248.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] Length = 570 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 116/235 (49%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAAFASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+++ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHERDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQATYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIE 234 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 7/229 (3%) Query: 222 FCSKDFMDFPIPSENTDFDDIISLNSIVEQW----TAPYAATSDVHNEKLFDSLPEN--K 275 F K + DF + + A D+ N D P+ + Sbjct: 341 FTGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEFVDLRNVVEGDESPDGQGR 400 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D Sbjct: 401 LKLARGIEVGHVFQLRGKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDE 460 Query: 336 KGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KGIIW ++APF++ ++ + R+A ++IYA L G DV DD E+ G Sbjct: 461 KGIIWTKAMAPFEVVIVPMNYKKSDTVREAADRIYAELLAAGADVLLDDRDERAGVLLND 520 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 ++LLG P ++++G + + + VE R + +++ E++ + + Sbjct: 521 SELLGIPHRIVIGDRALKEGNVEYAERRDNEAQAVAIGEIVARVTASLN 569 >gi|298499001|ref|ZP_07008808.1| prolyl-tRNA synthetase [Vibrio cholerae MAK 757] gi|297543334|gb|EFH79384.1| prolyl-tRNA synthetase [Vibrio cholerae MAK 757] Length = 571 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 114/237 (48%), Positives = 153/237 (64%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M V+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYEAMHVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL P+ A++G IGG+ SHEF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 68/190 (35%), Positives = 111/190 (58%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N D + + RGIEVGHIF GT YS M+ ++GK+ ++M Sbjct: 382 GKVEDLRNVVEGDPSPCGKGTLMLKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVAA IE +HD GIIWPD++APF+++++ + + + A EK+YA L+ Sbjct: 442 GCYGIGVSRVVAAAIEKNHDDYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G +V +DD E+ G F+ +L+G P +I+G + + + E K+R G +E +++E Sbjct: 502 AAGIEVLFDDRKERPGVMFSDMELIGVPHTIIIGDRSMDEGHFEYKNRRQGEKEAVAMES 561 Query: 434 VINYASHRFS 443 +I++ + + Sbjct: 562 IIDFIQAKLA 571 >gi|238855713|ref|ZP_04646009.1| threonine--tRNA ligase [Lactobacillus jensenii 269-3] gi|260665499|ref|ZP_05866346.1| threonyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US] gi|282934764|ref|ZP_06340004.1| threonine--tRNA ligase [Lactobacillus jensenii 208-1] gi|313471817|ref|ZP_07812309.1| threonine--tRNA ligase [Lactobacillus jensenii 1153] gi|238831659|gb|EEQ24000.1| threonine--tRNA ligase [Lactobacillus jensenii 269-3] gi|239528573|gb|EEQ67574.1| threonine--tRNA ligase [Lactobacillus jensenii 1153] gi|260560767|gb|EEX26744.1| threonyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US] gi|281301175|gb|EFA93479.1| threonine--tRNA ligase [Lactobacillus jensenii 208-1] Length = 643 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 75/434 (17%), Positives = 153/434 (35%), Gaps = 36/434 (8%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L L + + G+ W+P G + I +++ G + P L Sbjct: 238 RDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRVIERYIIDKELADGYQHVYTPVL 295 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y ++M D D M P + +++ HI+SYR LP Sbjct: 296 MNLDAYKTSGHWAHYREDMFPPMDMGDGEMLELRPMNCPSHIQVYKHHIRSYRELPIRIA 355 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + + K+ + ++ + Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALEQVQEE-FAKILKLIMDVYKDFDITD 414 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + F + + + DD+ E Sbjct: 415 YYFRLS-------------YRDPKNTDKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGE 461 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ ++ G DG++H Sbjct: 462 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERFD----LSYVGQDGEEHRP 510 Query: 313 -QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + +G M A + + G W + I + + +K+ Sbjct: 511 VMIHRGIVGTMERFIAYLTEIYKGAFPTWLA-----PEQVEIIPVNLDAHGEYAKKVRDE 565 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L K G D E++G + + P +++G ++ + V ++ T +E MSL Sbjct: 566 LLKHGFRAEVDFRNEKMGYKIRESQTQKVPYTLVLGDDEMNSNAVNVRPYGTEKQESMSL 625 Query: 432 EEVINYASHRFSNN 445 ++ IN + Sbjct: 626 DQFINELQADVDSY 639 >gi|229815406|ref|ZP_04445738.1| hypothetical protein COLINT_02454 [Collinsella intestinalis DSM 13280] gi|229808939|gb|EEP44709.1| hypothetical protein COLINT_02454 [Collinsella intestinalis DSM 13280] Length = 569 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 109/227 (48%), Positives = 159/227 (70%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + P L+E+P +AE+ASH+LMLR GMI + + G+YS+LPL ++L + I+R+E Sbjct: 1 MKMSNLYAPTLKEDPAEAELASHRLMLRAGMIRKQAAGLYSYLPLAWRSLRKIEDIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P + A +W ESGRY+ YG E++R++DR+++ + GPTHEE +TD+ ++ Sbjct: 61 MDAAGAQELLMPIMVDAQVWRESGRYNVYGPELMRISDRHEREFVLGPTHEETVTDLIKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF+ T E + +Y+ M + Sbjct: 121 ELKSYKQLPVNLYQIQDKFRDEMRPRFGLMRGREFIMKDGYSFNATQESLQETYDDMKQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 Y I R GLK++P+ A+SG IGGD S EF+ LAD GE + Sbjct: 181 YANICERCGLKALPVVADSGQIGGDTSVEFMALADAGEAALVYCDAC 227 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 71/191 (37%), Positives = 109/191 (57%), Gaps = 2/191 (1%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 A D+ D P ARGIEV +F GTKYS M ATF +G++ MG Sbjct: 378 AWEDLITVVAGDPCPHCGAPLAGARGIEVSQVFQLGTKYSEAMGATFADENGEEKPFLMG 437 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YG+G R +AA +E HD GIIWP S+AP+++S++ + C + C+++ A L + Sbjct: 438 CYGVGVSRTLAASVEQHHDENGIIWPVSIAPYEVSIMPLDPTIPECAEVCDRLTAELCEA 497 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD + G +FA DL+GFP Q+++G + + + VE+K R TG RED++++EV Sbjct: 498 GIEVIVDDRDIRPGVKFADNDLMGFPYQIVLGKRGLKNGTVELKDRATGEREDVAIDEVA 557 Query: 436 NYASHRFSNNR 446 + + + R Sbjct: 558 SKVADLVISQR 568 >gi|30021908|ref|NP_833539.1| prolyl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|81433856|sp|Q819Y4|SYP1_BACCR RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA ligase 1; Short=ProRS 1 gi|29897464|gb|AAP10740.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 14579] Length = 566 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 122/267 (45%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKALEKVATPDQKAIEEV 266 Score = 166 bits (419), Expect = 8e-39, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|15965178|ref|NP_385531.1| threonyl-tRNA synthetase [Sinorhizobium meliloti 1021] gi|22654127|sp|Q92QB0|SYT_RHIME RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|15074358|emb|CAC46004.1| Probable threonyl-tRNA synthetase [Sinorhizobium meliloti 1021] Length = 661 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 79/444 (17%), Positives = 146/444 (32%), Gaps = 39/444 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD ++ L + G+ W G + ++ A +R Sbjct: 234 QYLHVLAEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHGKGWRIFQSLVAYMRRRLE-G 290 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIFR 119 E++ P + LW SG + Y M ++ +D+ P + IF+ Sbjct: 291 DYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHIQIFK 350 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 +KSYR LP + R E G+MR R F DA+ F + + Sbjct: 351 HGLKSYRELPVRLAEFGAVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKIN- 409 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L ++ G K I ++ + P S E A+ T+V + + T Sbjct: 410 DLILSVYEDFGFKEIVVKLSTRPEKRVGSDELWDRAEAVMTEVL--QTIEEQSEGRIKTG 467 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + A Y + L D++ + ++ FG Sbjct: 468 I---------LPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------- 508 Query: 299 SATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 A + K V + G+M ++ ++ G +W + + Sbjct: 509 -AFYIDSESEKRQPVMIHRAICGSMERFLGILLENYAGHMPLW------ISPLQVVVATI 561 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D ++ RL G V D E+I + + P+ V+ G + + V Sbjct: 562 TSEADDYGREVAERLRDAGLTVETDFRNEKINYKVREHSVTKVPVIVVCGRREAEERSVN 621 Query: 418 IKHRLTGIREDMSLEEVINYASHR 441 I+ + + MSL+E + S Sbjct: 622 IRRLGSQAQTAMSLDEAVASLSAE 645 >gi|148256517|ref|YP_001241102.1| threonyl-tRNA synthetase [Bradyrhizobium sp. BTAi1] gi|146408690|gb|ABQ37196.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Bradyrhizobium sp. BTAi1] Length = 688 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 75/444 (16%), Positives = 140/444 (31%), Gaps = 41/444 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + G+ W P G + A +R G Sbjct: 264 YLKQIEEAEKRDHRKLGRELDLF--HFQEEGPGVVFWHPKGWSIFQALIAYMRRRL--AG 319 Query: 66 -AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-----KAMIYGPTHEEVMTDIFR 119 E++ P + LW SG ++ Y + M D + P + IF+ Sbjct: 320 EYDEVNAPQILDKSLWETSGHWNWYRENMFAAQSAGDEAEDKRWFALKPMNCPGHVQIFK 379 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 +KSYR+LP + + R E G+MR R F DA+ F + ++ Sbjct: 380 HGLKSYRDLPLRLAEFGVVHRYEASGAMHGLMRVRGFTQDDAHIFCTEDQLAEECLKIND 439 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 + + ++ + P + E A+ M + Sbjct: 440 LILSTYSDFGFEGELTVKLSTRPEKRVGTDEMWDHAE----------RVMATVLNEIKAQ 489 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 ++I + I A Y + L D++ + + ++ FG Sbjct: 490 RNNIRTE--INPGEGAFYGPKFEY---VLRDAIGRDWQCGTTQVDFNLPERFG------- 537 Query: 299 SATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 A + ADG V + G+M ++ + G +W ++ Sbjct: 538 -AFYIDADGAKKAPVMVHRAICGSMERFIGILIEHYAGSFPLWLAPTQVVVTTIT----- 591 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + +++ A L + G D E+I + + P ++VG K V Sbjct: 592 -SEGDEYAKQVLAALRRAGLRAEIDLRNEKINYKVREHSMQKIPALLVVGKKEAETHSVS 650 Query: 418 IKHRLTGIREDMSLEEVINYASHR 441 ++ + M + I Sbjct: 651 VRRLGRDGQTVMPTADAIAALVDE 674 >gi|153835582|ref|ZP_01988249.1| prolyl-tRNA synthetase [Vibrio harveyi HY01] gi|148867822|gb|EDL67058.1| prolyl-tRNA synthetase [Vibrio harveyi HY01] Length = 571 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 112/237 (47%), Positives = 151/237 (63%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHTRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKEGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 64/190 (33%), Positives = 110/190 (57%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N D + + RGIEVGHIF G YS M+ G DGK+ ++M Sbjct: 382 GQVEDLRNVVEGDPSPCGQGTLMLKRGIEVGHIFQLGNVYSQAMNCGVLGPDGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVA+ IE +HD GIIWPD++APF+++++ + + ++A EK+YA L+ Sbjct: 442 GCYGIGVSRVVASAIEQNHDKYGIIWPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G +V +DD E+ G F+ +L+G P +++G + + + E K+R +G + +++ + Sbjct: 502 AMGIEVLFDDRKERPGVMFSDMELIGIPHTIVIGDRSMKEGNFEYKNRRSGEKTAVAMAD 561 Query: 434 VINYASHRFS 443 ++ + + Sbjct: 562 IVEHVKAQLQ 571 >gi|46907545|ref|YP_013934.1| prolyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|47093943|ref|ZP_00231680.1| prolyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] gi|254824622|ref|ZP_05229623.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|254852630|ref|ZP_05241978.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|255522074|ref|ZP_05389311.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J1-175] gi|300765441|ref|ZP_07075423.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL N1-017] gi|81830231|sp|Q720A3|SYP_LISMF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|46880813|gb|AAT04111.1| prolyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|47017681|gb|EAL08477.1| prolyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] gi|258605946|gb|EEW18554.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|293593860|gb|EFG01621.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|300513878|gb|EFK40943.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL N1-017] gi|328468602|gb|EGF39602.1| prolyl-tRNA synthetase [Listeria monocytogenes 1816] Length = 568 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 124/294 (42%), Positives = 167/294 (56%), Gaps = 5/294 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E YN M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--- 237 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D+ +E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYSD-ASDYAANTEMAPVL 239 Query: 238 -DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 L +E+ P + E L + + + ++ I Sbjct: 240 YMEKKSHELEKDMEKVATPDQKSIADIVEFLEVPIEKTMKSMLYQVDDEVIMVL 293 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 65/180 (36%), Positives = 101/180 (56%), Gaps = 3/180 (1%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ ++ D P+ + V GIEVGHIF GTKYS M+AT +G+ + MG YG Sbjct: 383 DLRMIQVGDLSPDGQGVIKFAEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R+++A+ E S+D G +W ++PF + LI + + E +Y+ L G Sbjct: 443 IGVSRILSAIAEQSNDENGFVWDKQISPFDLHLIPVNMKSEEQVAFAETLYSSLQDAGFS 502 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G +FA ADL+G P+++ VG K ++ VE+K R TG ++ +E++N Sbjct: 503 VLIDDRAERAGVKFADADLIGLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDELLNTL 561 >gi|296314467|ref|ZP_06864408.1| proline--tRNA ligase [Neisseria polysaccharea ATCC 43768] gi|296838764|gb|EFH22702.1| proline--tRNA ligase [Neisseria polysaccharea ATCC 43768] Length = 570 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTAYQDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANVE 234 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 69/229 (30%), Positives = 111/229 (48%), Gaps = 7/229 (3%) Query: 222 FCSKDFMDFPIPSENTDFDDIISLNSIVEQW----TAPYAATSDVHNEKLFDSLPE--NK 275 F K + DF + + A D+ N D P+ + Sbjct: 341 FTGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEFVDLRNVIEGDISPDEQGR 400 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D Sbjct: 401 LKLARGIEVGHVFQLRDKYTKAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDE 460 Query: 336 KGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KGIIW ++APF++ ++ + R+A +KIYA L G DV DD E+ G Sbjct: 461 KGIIWTKTMAPFEVVIVPMNYKKSDAVREATDKIYAELLAAGADVLLDDRDERAGVLLND 520 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 ++LLG P ++++G + + + VE R + +++ E++ + + Sbjct: 521 SELLGIPHRIVIGDRALKEGNVEYAERRDNEVQAVAIGEIVARVTASLN 569 >gi|228986962|ref|ZP_04147088.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228772740|gb|EEM21180.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 566 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 122/267 (45%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKALEKVATPDQKAIEEV 266 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDESGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|229157395|ref|ZP_04285473.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 4342] gi|228626122|gb|EEK82871.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 4342] Length = 566 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 122/267 (45%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKALEKVATPDQKAIEEV 266 Score = 162 bits (411), Expect = 7e-38, Method: Composition-based stats. Identities = 73/190 (38%), Positives = 106/190 (55%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDESGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R T E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATAESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|192292254|ref|YP_001992859.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1] gi|192286003|gb|ACF02384.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1] Length = 687 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 140/443 (31%), Gaps = 38/443 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + G+ W G ++ +R Sbjct: 263 YLHQIEEAEKRDHRKLGRELDLF--HFQEEGPGVVFWHAKGWSLFQSLVGYMRRRL-AGD 319 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-----KAMIYGPTHEEVMTDIFRS 120 E++ P + LW SG ++ Y + M D + P + IF+ Sbjct: 320 YDEVNAPQILDKVLWETSGHWEWYRENMFAAQSAGDDAEDKRWFALKPMNCPGHVQIFKH 379 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + + R E G+MR R F DA+ F + ++ + Sbjct: 380 GLKSYRDLPLRLAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEAQLAEECIKINDL 439 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + ++ + P + E A+ + + N Sbjct: 440 ILSTYSDFGFEGELTVKLSTRPEKRVGTDEMWDHAER-----VMATVLSEIKAKGGNRIK 494 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 +I A Y + L D++ + + ++ FG Sbjct: 495 TEI------NPGEGAFYGPKFEY---VLRDAIGRDWQCGTTQVDFNLPERFG-------- 537 Query: 300 ATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + ADG V + G+M ++ + G +W V ++ Sbjct: 538 AFYIDADGAKKAPVMVHRAICGSMERFTGILIEHYAGNFPLWLAPVQVVVTTIT------ 591 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D +K+ A L K G D E+I + L P ++VG K V + Sbjct: 592 SEGDDYAKKVLAALRKAGLRADIDLRNEKINFKVREHSLAKVPALLVVGKKEAESHSVSV 651 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + ++ M +E I Sbjct: 652 RRLGSEGQKVMPTDEAIAALVDE 674 >gi|327188321|gb|EGE55539.1| threonyl-tRNA synthetase protein [Rhizobium etli CNPAF512] Length = 668 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 73/447 (16%), Positives = 144/447 (32%), Gaps = 46/447 (10%) Query: 7 FLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L + RD ++ L + G+ W G + + A +R Sbjct: 234 YLHMLAEAEKRDHRKLGREMDLF--HFQEEGPGVVFWHGKGWRIFQTLVAYMRRRL-AAD 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEML-----------RLADRNDKAMIYGPTHEEVM 114 E++ P + LW SG + Y + M + +++ P + Sbjct: 291 YQEVNAPQVLDTSLWETSGHWGWYQENMFAVKSAHAMTHPEDKEADNRVFALKPMNCPGH 350 Query: 115 TDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHS 173 IF+ +KSYR LP + L R E G+MR R F DA+ F + + Sbjct: 351 VQIFKHGLKSYRELPIRLAEFGLVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAEC 410 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 L ++ G K I ++ + P S A+ T V I Sbjct: 411 LKIN-DLILSVYEDFGFKEIVVKLSTRPEKRVGSDALWDRAEAVMTDVL-------KTIE 462 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 +++ L A Y + L D++ + ++ FG Sbjct: 463 AQSEGRIKTGIL----PGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG-- 513 Query: 294 YSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 A + ++ + + G+M ++ + G +W + ++ Sbjct: 514 ------AFYIDSNSEKTQPVMIHRAICGSMERFLGILIENFAGHMPLWVSPLQVVVATIT 567 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 ++ L G +V D E+I + + P+ ++ G K Sbjct: 568 ------SEADAYGLEVAEALRDAGLNVETDFRNEKINYKIREHSVTKVPVIIVCGRKEAE 621 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYAS 439 + V I+ + + M L+ + + Sbjct: 622 ERTVNIRRLGSQDQVSMELDAAVESLT 648 >gi|312195608|ref|YP_004015669.1| threonyl-tRNA synthetase [Frankia sp. EuI1c] gi|311226944|gb|ADP79799.1| threonyl-tRNA synthetase [Frankia sp. EuI1c] Length = 662 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 65/439 (14%), Positives = 135/439 (30%), Gaps = 36/439 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + G+ + P G + R G ++ Sbjct: 258 EAEKRDHRRLGAELDLFS-FPTELGPGLAVFHPKGGAIRTVMEDYSRRRHIEAGYEFVNT 316 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + + L+ SG D + M P + + IF+S +SYR LP Sbjct: 317 PHITKSTLYEISGHLDWFADGMYPPMSLDGGTDYYLKPMNCPMHILIFKSRGRSYRELPL 376 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 ++ +R E G+ R R DA+ F + + + L + G Sbjct: 377 RLFEFGTVYRYEKSGVVHGLTRVRGLTQDDAHLFCARDQLPEEL-DSTLKFVLGLLRDYG 435 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 L + + P E + + + + + + Sbjct: 436 LTDFYLELSTRP----------------EGKAIGTDEEWEQATSLLREAAEKQDLELVMD 479 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y + + D++ ++S ++ F ++ + A + Sbjct: 480 PGGGAFYGPKI---SVQAKDAIGRTWQLSTIQVD----FQLPQRFDMEYQAA---DGTRQ 529 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + G + A++ + P +AP ++ I I + + Sbjct: 530 RPFMIHRALFGTIERFFAILL---EHYAGAMPPWLAPVQVVGIPIT---DEHVPYLKDVA 583 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 A+L+ G V D ++ + A P +I G+ V+ V ++R R + Sbjct: 584 AKLTAKGIRVEVDASDNRMQKKIRDAQKQKVPYMLIAGADDVAKDAVSFRYRDGTQRNAV 643 Query: 430 SLEEVINYASHRFSNNRPV 448 ++E + V Sbjct: 644 PVDEAVAEILDAVERRIQV 662 >gi|254466098|ref|ZP_05079509.1| threonyl-tRNA synthetase [Rhodobacterales bacterium Y4I] gi|206687006|gb|EDZ47488.1| threonyl-tRNA synthetase [Rhodobacterales bacterium Y4I] Length = 648 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 85/445 (19%), Positives = 149/445 (33%), Gaps = 45/445 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD ++ L + + + G W P G K + +R +Q + Sbjct: 234 KAHLHMLEEAAKRDHRKLGREMDLF--HMQEEAPGQIFWHPNGWKVYTTLQDYMRRQQEK 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G +E++ P + LW SG ++ Y + M + R P + IF Sbjct: 292 GGYVEVNTPQVVDRRLWEASGHWEKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQIF 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F DA+ F + + K Sbjct: 352 NQGLKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFCA-EDQIEAETKKF 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 I+ LG + ++ P S E D + Sbjct: 411 IDFLSEIYKDLGFEKFSVKFSDRPEKRSGSDE-----------------VWDKSEAALKA 453 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + + A Y + L D++ + + ++ F + Sbjct: 454 ATEAAGCAYDLNPGEGAFYGPKLEF---VLTDAIGRDWQCGTLQVD----FVLPER---- 502 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + AT+ GADG H + +G+ ++ H GK W S+ Sbjct: 503 LDATYIGADGAKHRPVMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASIT---- 558 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 +++ A L K G D E+I + + P+ + VG + V + V Sbjct: 559 --SDADAYVQEVVAELKKAGVRAEADIRNEKINYKVREHSVGKVPVILAVGHREVEERTV 616 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + SLE V + Sbjct: 617 SVRRLGEKETKVESLENVTKALAAE 641 >gi|268595028|ref|ZP_06129195.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae 35/02] gi|268599257|ref|ZP_06133424.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae MS11] gi|268686874|ref|ZP_06153736.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] gi|268548417|gb|EEZ43835.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae 35/02] gi|268583388|gb|EEZ48064.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae MS11] gi|268627158|gb|EEZ59558.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] Length = 580 Score = 233 bits (593), Expect = 7e-59, Method: Composition-based stats. Identities = 116/235 (49%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 11 MKASQFFISTLKEAPAEAAFASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 70 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+++ GPT EEV+ DI R Sbjct: 71 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHERDFCMGPTCEEVIADIVRK 130 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 131 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQATYDAMYDA 190 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 191 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIE 244 Score = 157 bits (398), Expect = 3e-36, Method: Composition-based stats. Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 7/229 (3%) Query: 222 FCSKDFMDFPIPSENTDFDDIISLNSIVEQW----TAPYAATSDVHNEKLFDSLPEN--K 275 F K + DF + + A D+ N D P+ + Sbjct: 351 FTGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEFVDLRNVVEGDESPDGQGR 410 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D Sbjct: 411 LKLARGIEVGHVFQLRGKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDE 470 Query: 336 KGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KGIIW ++APF++ ++ + R+A ++IYA L G DV DD E+ G Sbjct: 471 KGIIWTKAMAPFEVVIVPMNYKKSDTVREAADRIYAELLAAGADVLLDDRDERAGVLLND 530 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 ++LLG P ++++G + + + VE R + +++ E++ + + Sbjct: 531 SELLGIPHRIVIGDRALKEGNVEYAERRDNEAQAVAIGEIVARVTASLN 579 >gi|254669934|emb|CBA04522.1| Prolyl-tRNA synthetase [Neisseria meningitidis alpha153] Length = 570 Score = 233 bits (593), Expect = 7e-59, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 164/235 (69%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL+ P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIE 234 Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats. Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 7/229 (3%) Query: 222 FCSKDFMDFPIPSENTDFDDIISLNSIVEQW----TAPYAATSDVHNEKLFDSLPEN--K 275 F K + DF + + A D+ + D P+ + Sbjct: 341 FAGKVYADFATEKDGDWVIGANEDGYHYTGFNFGRDAAEPEFVDLRDVVEGDESPDGQGR 400 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D Sbjct: 401 LKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDE 460 Query: 336 KGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KGIIW ++APF++ ++ + R+A +KIYA L G DV DD E+ G Sbjct: 461 KGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERAGVLLND 520 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 ++LLG P ++++G + + + VE R + +++ E++ + + Sbjct: 521 SELLGIPHRIVIGDRALKEGNVEYAERRDNEAQAIAIGEIVARVTASLN 569 >gi|323495331|ref|ZP_08100409.1| prolyl-tRNA synthetase [Vibrio brasiliensis LMG 20546] gi|323310402|gb|EGA63588.1| prolyl-tRNA synthetase [Vibrio brasiliensis LMG 20546] Length = 571 Score = 233 bits (593), Expect = 7e-59, Method: Composition-based stats. Identities = 111/237 (46%), Positives = 150/237 (63%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHTRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 113/206 (54%), Gaps = 3/206 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPM 298 D I D+ N D + + RGIEVGHIF G YS M Sbjct: 366 DDKHYFGINWGRDVELGQIEDLRNVVEGDPSPCGKGTLMLKRGIEVGHIFQLGNTYSEAM 425 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 + G DGK+ ++MG YGIG RVVA+ IE +HD GIIWPD++APF+++++ + Sbjct: 426 NCGVLGPDGKNVILEMGCYGIGVSRVVASAIEQNHDKYGIIWPDALAPFQVAIVPMNMHK 485 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + ++A EK+YA L+ +G +V +DD E+ G F+ +L+G P +++G + + + E Sbjct: 486 SEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFSDMELIGVPHTIVIGDRSMKEGNFE 545 Query: 418 IKHRLTGIREDMSLEEVINYASHRFS 443 K+R +G + +++ +++ + + + Sbjct: 546 YKNRRSGEKTAVAMADIVEHVKAQLA 571 >gi|262382112|ref|ZP_06075250.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_33B] gi|298375301|ref|ZP_06985258.1| threonine--tRNA ligase [Bacteroides sp. 3_1_19] gi|262297289|gb|EEY85219.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_33B] gi|298267801|gb|EFI09457.1| threonine--tRNA ligase [Bacteroides sp. 3_1_19] Length = 651 Score = 233 bits (593), Expect = 7e-59, Method: Composition-based stats. Identities = 73/446 (16%), Positives = 140/446 (31%), Gaps = 40/446 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD ++ L KG+ WLP G + +R Q R Sbjct: 230 EYLTLLEEAKKRDHRKIGKEMDLFM-FSDTVGKGLPMWLPKGTALRLRLQEFLRRIQARY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + L++ SG Y YGK+ + + P + I+++ Sbjct: 289 NYQEVMCPPIGNKLLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F + + + + Sbjct: 349 RSYKDLPLRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKQE-FLNVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + ++ + D + + D + + Sbjct: 408 SIVFKTMNFENFEAQISLR--------------DKVNREKYIGSDENWEKAEQAIVEACE 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + +E A Y D + D++ ++ ++ Sbjct: 454 EKGLKAKIEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFQL 502 Query: 301 TFKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + GAD + H M R VA +IE + + Sbjct: 503 EYTGADNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLWLTPEQVCIMPI-------S 555 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + D +I L DD E+IG + +L P +IVG K + +V + Sbjct: 556 EKFNDYAWQIARELGNQEIRAIVDDRNEKIGRKIRDNELKRIPYMLIVGEKEAENGEVSV 615 Query: 419 KHRLTGIREDMSLEEVINYASHRFSN 444 + + G + M + + Sbjct: 616 RKQGEGDKGSMKIATFAALLNGEVEE 641 >gi|218282135|ref|ZP_03488434.1| hypothetical protein EUBIFOR_01014 [Eubacterium biforme DSM 3989] gi|218216861|gb|EEC90399.1| hypothetical protein EUBIFOR_01014 [Eubacterium biforme DSM 3989] Length = 587 Score = 233 bits (593), Expect = 7e-59, Method: Composition-based stats. Identities = 78/438 (17%), Positives = 147/438 (33%), Gaps = 39/438 (8%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD + ++ L T I + + G+ +LP G + + +E + G + Sbjct: 182 LEEAKKRDHKKLGKEMGLFT--ISEFAPGMPIFLPDGMILRNILEQYWYQEHTKEGYQFI 239 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P + S +LW SG +D Y M +D+ P + ++ S + SY++LP Sbjct: 240 KTPIMMSKELWELSGHWDHYKDNMYTSM-VDDREFAIKPMNCPGALLVYNSTLHSYKDLP 298 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 ++ R E G+ R R F DA+ +TP+ + K+ RI+ Sbjct: 299 LRLGELGQVHRHEASGALNGLFRVRTFTQDDAH-LFVTPDQLEEEVKKVLQLVDRIYSVF 357 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 GL + P E+ S++ D + + Sbjct: 358 GLPYEI-ELSTRP----------------ESGYIGSEEIWDVSEKALAQACVHAGKEYKV 400 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A Y D+H + DSL + +++ + ADG Sbjct: 401 NPGDGAFYGPKLDIH---IKDSLGRVWQCGTVQLDMNLP--------ERFECKYVDADGT 449 Query: 309 DHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + G++ ++ G +W + I H + + K Sbjct: 450 KKTPIMLHRVVYGSVERFIGILIEHFGGHFPLWLA-----PRQFVVIPVHHEKHVEYANK 504 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + L+ +G D E++G + A L Q++VG ++ V I+ Sbjct: 505 VCDALTALGMRATVDSRNEKLGYRVREAQLQKVTYQIVVGDGEQENNTVTIRQSGKKDSV 564 Query: 428 DMSLEEVINYASHRFSNN 445 +SL E + N Sbjct: 565 TLSLNEALAKFKAEVDNK 582 >gi|163740958|ref|ZP_02148351.1| threonyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10] gi|161385949|gb|EDQ10325.1| threonyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10] Length = 648 Score = 233 bits (593), Expect = 7e-59, Method: Composition-based stats. Identities = 83/443 (18%), Positives = 145/443 (32%), Gaps = 45/443 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD ++ L + + + G W P G K + +R Q+R Sbjct: 234 KAHLHMLEEAAKRDHRKLGREMNLF--HMQEEAPGQIFWHPNGWKIYTTLQDYMRRMQDR 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIY-----GPTHEEVMTDIF 118 G +E++ P + LW SG +D Y + M + D A P + +F Sbjct: 292 DGYVEVNTPQVVDRKLWEASGHWDKYQENMFIVEVDEDHAREKAVNALKPMNCPCHVQVF 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F D + F + + K Sbjct: 352 NQGLKSYRDLPLRMAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFCAEDQIESET-AKF 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +++ LG ++ + P S E D + Sbjct: 411 IAFLSKVYADLGFHDWTIKLSTRPEKRIGSDE-----------------SWDLVEKALGD 453 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 ++E A Y + L D++ N + ++ Sbjct: 454 ACKAAGYEYELLEGEGAFYGPKLEF---TLTDAIGRNWQCGTLQVDPNLP--------ER 502 Query: 298 MSATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + A F G DG H + +G+ ++ H GK W S+ Sbjct: 503 LDANFIGQDGSKHRPFMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASIT---- 558 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++ L G D E+I + + P+ + VG + V + V Sbjct: 559 --SDADDYVNEVVETLRAAGVRAEADIRNEKINYKVREHSVGKVPVILAVGHREVEERTV 616 Query: 417 EIKHRLTGIREDMSLEEVINYAS 439 ++ + +LE V + Sbjct: 617 SVRRLGEKQTKVEALEAVTKALA 639 >gi|15614982|ref|NP_243285.1| prolyl-tRNA synthetase [Bacillus halodurans C-125] gi|81857777|sp|Q9KA71|SYP_BACHD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|10175039|dbj|BAB06138.1| prolyl-tRNA synthetase [Bacillus halodurans C-125] Length = 569 Score = 233 bits (593), Expect = 7e-59, Method: Composition-based stats. Identities = 115/235 (48%), Positives = 160/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S + +P ++E P DA++ SH+LMLR GMI Q + GIY++LPL ++ + + +I+REE Sbjct: 1 MKQSFFLVPTMREVPADADVVSHQLMLRAGMIRQVAAGIYTYLPLARRVIRKIESIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++TGA E+++PTL A+LW ESGR++ YG E++RL DR+++ GPTHEEV+T + R Sbjct: 61 LDQTGAQEITMPTLHPAELWQESGRWEKYGDELMRLTDRHNRQFALGPTHEEVITSLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ KFRDE RPRFG++R REF+MKDAYSF E Y M+ + Sbjct: 121 SINSYKKLPLNVYQIQSKFRDERRPRFGLLRGREFIMKDAYSFHTGGESLDEMYKVMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R GL P+ A+SG IGG +HEF+ LAD GE + S D+ E Sbjct: 181 YSRIFRRAGLNVRPVIADSGAIGGKDTHEFMALADVGEDTIAYSDQ-SDYAANIE 234 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 105/206 (50%), Gaps = 3/206 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLP 297 + + E+ +D+ + D P+ K +GIEVG +F GT YS Sbjct: 361 ESNKHFIHVNEERDFTVDTYADLRFIQEGDPSPDGKGTIRFAQGIEVGQVFKLGTVYSEK 420 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + ATF +GK + MG YGIG R+VAAVIE HD GI+WP SVAPF + ++ + Sbjct: 421 LGATFLDENGKSQPMLMGCYGIGVSRMVAAVIEQHHDEDGIVWPTSVAPFDVHVLALNVK 480 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + + +Y L + G DV DD E+ G +F ADL+G PL+V VG + + VE Sbjct: 481 KEEQMKLADSVYHSLQQAGLDVLLDDRPERAGVKFKDADLIGLPLRVAVGKR-ADEGYVE 539 Query: 418 IKHRLTGIREDMSLEEVINYASHRFS 443 +K R TG ++ +E++ + Sbjct: 540 VKVRKTGEVIEVHADELVPTIQAKLQ 565 >gi|228909643|ref|ZP_04073466.1| Prolyl-tRNA synthetase [Bacillus thuringiensis IBL 200] gi|228849932|gb|EEM94763.1| Prolyl-tRNA synthetase [Bacillus thuringiensis IBL 200] Length = 566 Score = 233 bits (593), Expect = 7e-59, Method: Composition-based stats. Identities = 123/267 (46%), Positives = 165/267 (61%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y+ ++ + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDCLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E A E++ Sbjct: 240 ATYTKSDEAEMALEKVATPDQKAIEEV 266 Score = 166 bits (419), Expect = 1e-38, Method: Composition-based stats. Identities = 75/190 (39%), Positives = 108/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + V R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDVQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EKGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|27365189|ref|NP_760717.1| prolyl-tRNA synthetase [Vibrio vulnificus CMCP6] gi|81844691|sp|Q8DBH9|SYP_VIBVU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|27361336|gb|AAO10244.1| prolyl-tRNA synthetase [Vibrio vulnificus CMCP6] Length = 571 Score = 233 bits (593), Expect = 7e-59, Method: Composition-based stats. Identities = 113/237 (47%), Positives = 152/237 (64%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHVRPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M + Sbjct: 121 EVSSYKQLPINLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL+ P+ A+SG IGG+ S EF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGNGSQEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 171 bits (434), Expect = 2e-40, Method: Composition-based stats. Identities = 62/190 (32%), Positives = 111/190 (58%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 +D+ N D + + RGIEVGHIF G YS M+ ++GK+ ++M Sbjct: 382 GQVADLRNVVEGDPSPCGKGTLMLKRGIEVGHIFQLGNVYSEAMNCGVLDSNGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVAA IE ++D GIIWPD++APF+++++ + + ++A EK+YA L+ Sbjct: 442 GCYGIGVSRVVAAAIEQNNDKYGIIWPDALAPFQVAIVPMNMHKSERVQEAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G +V +DD E+ G F+ +L+G P +++G + + + E K+R +G + +++ + Sbjct: 502 AMGIEVLFDDRKERPGVMFSDMELIGIPHTIVIGDRSMDEGHFEYKNRRSGEKTPVAMAD 561 Query: 434 VINYASHRFS 443 ++ + + Sbjct: 562 IVEHIKAQLK 571 >gi|42782910|ref|NP_980157.1| prolyl-tRNA synthetase [Bacillus cereus ATCC 10987] gi|217961239|ref|YP_002339807.1| prolyl-tRNA synthetase [Bacillus cereus AH187] gi|229140460|ref|ZP_04269015.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST26] gi|81409464|sp|Q732Q0|SYP1_BACC1 RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA ligase 1; Short=ProRS 1 gi|226731429|sp|B7HLF2|SYP_BACC7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|42738837|gb|AAS42765.1| prolyl-tRNA synthetase [Bacillus cereus ATCC 10987] gi|217063356|gb|ACJ77606.1| prolyl-tRNA synthetase [Bacillus cereus AH187] gi|228643021|gb|EEK99297.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST26] gi|324327716|gb|ADY22976.1| prolyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 566 Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats. Identities = 122/267 (45%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKALEKVATPDQKAIEEV 266 Score = 166 bits (419), Expect = 9e-39, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|37680756|ref|NP_935365.1| prolyl-tRNA synthetase [Vibrio vulnificus YJ016] gi|81859846|sp|Q7MIE5|SYP_VIBVY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|37199505|dbj|BAC95336.1| prolyl-tRNA synthetase [Vibrio vulnificus YJ016] Length = 571 Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats. Identities = 113/237 (47%), Positives = 152/237 (64%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHVRPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M + Sbjct: 121 EVSSYKQLPINLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL+ P+ A+SG IGG+ S EF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGNGSQEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 171 bits (434), Expect = 2e-40, Method: Composition-based stats. Identities = 63/190 (33%), Positives = 111/190 (58%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 +D+ N D + + RGIEVGHIF G YS M+ ++GK+ ++M Sbjct: 382 GQVADLRNVVEGDPSPCGKGTLMLKRGIEVGHIFQLGNVYSEAMNCGVLDSNGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVAA IE ++D GIIWPD++APF+++++ + + ++A EK+YA L+ Sbjct: 442 GCYGIGVSRVVAAAIEQNNDKYGIIWPDALAPFQVAIVPMNMHKSERVQEAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G +V +DD E+ G F+ +L+G P +++G + + + E K+R +G + +++ + Sbjct: 502 AMGIEVLFDDRKERPGVMFSDMELIGIPHTIVIGDRSMDEGHFEYKNRRSGEKTPVAMAD 561 Query: 434 VINYASHRFS 443 ++ Y + Sbjct: 562 IVEYIKAQLE 571 >gi|197103889|ref|YP_002129266.1| threonyl-tRNA synthetase [Phenylobacterium zucineum HLK1] gi|238690165|sp|B4RE95|SYT_PHEZH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|196477309|gb|ACG76837.1| threonyl-tRNA synthetase [Phenylobacterium zucineum HLK1] Length = 658 Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats. Identities = 78/426 (18%), Positives = 133/426 (31%), Gaps = 40/426 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + ++ L+E RD ++ L + + KG+ W G V + +R + Sbjct: 230 EAYIQRLEEAEKRDHRKLGRQMDLF--HMQEEGKGMVFWHEKGLTLWRTVESYVRRRLDE 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + W +SG +D Y M + + P + IF+ K Sbjct: 288 AGYQEVRTPQVLDRVFWEKSGHWDKYRPNMFVCETEEGEELSLKPMNCPGHVQIFKFGQK 347 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R E G+MR R F DA+ F + + + Sbjct: 348 SYRDLPLRMAEFGACHRYEPSGALHGLMRVRAFTQDDAHIFCR-EDQIEEETARFIELAN 406 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 I GL+ + + P S EF D Sbjct: 407 SIHADFGLERDHIALATRPEVRAGSDEF-----------------WDKAEAQMLAAARKA 449 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I E A YA D L DS+ ++ G A + Sbjct: 450 GVEPVIAEGDGAFYAPKLDW---VLKDSIGRTWTCGTIQLDYVLPERLG--------AEY 498 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 DG + G++ V+ ++ G +W V ++ + Sbjct: 499 VAEDGSKQRPVMLHRAICGSLERFIGVLIENYAGAFPLWLAPVQVVVATITSDADDYARA 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 A L G V D E+I + L P+ +VG + + KV ++ Sbjct: 559 AAA------ELKAKGLRVELDLRNEKINYKVREHSLAKVPVIAVVGRREAEEGKVALRRL 612 Query: 422 LTGIRE 427 + ++ Sbjct: 613 GSDGQQ 618 >gi|190891876|ref|YP_001978418.1| threonyl-tRNA synthetase [Rhizobium etli CIAT 652] gi|238692487|sp|B3PNV4|SYT_RHIE6 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|190697155|gb|ACE91240.1| threonyl-tRNA synthetase protein [Rhizobium etli CIAT 652] Length = 668 Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats. Identities = 73/447 (16%), Positives = 144/447 (32%), Gaps = 46/447 (10%) Query: 7 FLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L + RD ++ L + G+ W G + + A +R Sbjct: 234 YLHMLAEAEKRDHRKLGREMDLF--HFQEEGPGVVFWHGKGWRIFQTLVAYMRRRL-AAD 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEML-----------RLADRNDKAMIYGPTHEEVM 114 E++ P + LW SG + Y + M + +++ P + Sbjct: 291 YQEVNAPQVLDTSLWETSGHWGWYQENMFAVKSAHAMTHPEDKEADNRVFALKPMNCPGH 350 Query: 115 TDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHS 173 IF+ +KSYR LP + L R E G+MR R F DA+ F + + Sbjct: 351 VQIFKHGLKSYRELPIRLAEFGLVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAEC 410 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 L ++ G K I ++ + P S A+ T V I Sbjct: 411 LKIN-DLILSVYEDFGFKEIVVKLSTRPEKRVGSDALWDRAEAVMTDVL-------KTIE 462 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 +++ L A Y + L D++ + ++ FG Sbjct: 463 AQSEGRIKTGIL----PGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG-- 513 Query: 294 YSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 A + ++ + + G+M ++ + G +W + ++ Sbjct: 514 ------AFYIDSNSEKTQPVMIHRAICGSMERFLGILIENFAGHMPLWVSPLQVVVATIT 567 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 ++ L G +V D E+I + + P+ ++ G K Sbjct: 568 ------SEADAYGLEVAEALRDAGLNVETDFRNEKINYKIREHSVTKVPVIIVCGRKEAE 621 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYAS 439 + V I+ + + M L+ + + Sbjct: 622 ERTVNIRRLGSQDQVSMGLDAAVESLT 648 >gi|153836755|ref|ZP_01989422.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810] gi|260900371|ref|ZP_05908766.1| proline--tRNA ligase [Vibrio parahaemolyticus AQ4037] gi|149749901|gb|EDM60646.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810] gi|308108556|gb|EFO46096.1| proline--tRNA ligase [Vibrio parahaemolyticus AQ4037] Length = 571 Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats. Identities = 112/237 (47%), Positives = 150/237 (63%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHVRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL+ P+ A+SG IGG S EF VLAD+GE + D+ E Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLADSGEDLIAF-STESDYAANIEKA 236 Score = 169 bits (428), Expect = 8e-40, Method: Composition-based stats. Identities = 64/190 (33%), Positives = 110/190 (57%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N D + + RGIEVGHIF G YS M+ + G DGK+ ++M Sbjct: 382 GQVEDLRNVVEGDPSPCGKGTLMLKRGIEVGHIFQLGNVYSEAMNCSVLGPDGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVA+ IE +HD GIIWPD++APF+++++ + + ++ EK+YA L+ Sbjct: 442 GCYGIGVSRVVASAIEQNHDKYGIIWPDAIAPFQVAIVPMNMHKSERVKEEAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G +V +DD E+ G F+ +L+G P +++G + + + E K+R TG + +++ + Sbjct: 502 AMGIEVLFDDRKERPGVMFSDIELIGIPHTIVIGDRSMDEGNFEYKNRRTGEKTPVAMAD 561 Query: 434 VINYASHRFS 443 ++ + + Sbjct: 562 IVEHVKSQLK 571 >gi|226223920|ref|YP_002758027.1| prolyl-tRNA synthetase [Listeria monocytogenes Clip81459] gi|259511604|sp|C1L2M5|SYP_LISMC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|225876382|emb|CAS05091.1| prolyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 568 Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats. Identities = 124/294 (42%), Positives = 167/294 (56%), Gaps = 5/294 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E YN M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--- 237 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D+ +E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYSD-ASDYAANTEMAPVL 239 Query: 238 -DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 L +E+ P + E L + + + ++ I Sbjct: 240 YMEKKSHELEKDMEKVATPDQKSIADIVEFLEVPIEKTMKSMLYQVDDEVIMVL 293 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 65/180 (36%), Positives = 101/180 (56%), Gaps = 3/180 (1%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ ++ D P+ + V GIEVGHIF GTKYS M+AT +G+ + MG YG Sbjct: 383 DLRMIQVGDLSPDGQGVIKFAEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R+++A+ E S+D G +W ++PF + LI + + E +Y+ L G Sbjct: 443 IGVSRILSAIAEQSNDENGFVWDKQISPFDLHLIPVNMKSEEQVAFAETLYSSLQDAGFS 502 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G +FA ADL+G P+++ VG K ++ VE+K R TG ++ +E++N Sbjct: 503 VLIDDRAERAGVKFADADLIGLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDELLNTL 561 >gi|47569097|ref|ZP_00239786.1| prolyl-tRNA synthetase [Bacillus cereus G9241] gi|47554259|gb|EAL12621.1| prolyl-tRNA synthetase [Bacillus cereus G9241] Length = 566 Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats. Identities = 123/267 (46%), Positives = 168/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GLK + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLKFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKALEKVATPDQKAIEEV 266 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDESGLVWPKAVAPFHVHVIPVNMKSDAQREMGESIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|312984108|ref|ZP_07791455.1| threonine--tRNA ligase [Lactobacillus crispatus CTV-05] gi|310894462|gb|EFQ43537.1| threonine--tRNA ligase [Lactobacillus crispatus CTV-05] Length = 644 Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats. Identities = 79/433 (18%), Positives = 154/433 (35%), Gaps = 34/433 (7%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L L + + G+ W+P G V I + + G + P L Sbjct: 239 RDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVL 296 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y +M D D M P + I++ HI+SYR+LP Sbjct: 297 MNLDAYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVA 356 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + K+ + ++ + Sbjct: 357 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQTE-FAKILKLIMDVYKDFDITD 415 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + F + + + DD+ E Sbjct: 416 YYFRLS-------------YRDPKNTDKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGE 462 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ T+ G DG++H Sbjct: 463 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----GLTYVGQDGEEHRP 511 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 M G + + I + +P +AP + +I + + + EK+ L Sbjct: 512 VMIHR--GIVGTMERFIAYLTEIYKGAFPTWLAPIQAEIIPVN--NDAHGEYAEKVRQEL 567 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 +K G V D+ E++G + + P +++G + + + V ++ T SL Sbjct: 568 AKRGFRVEVDNRNEKMGYKIRESQTQKVPYTLVLGDEEMKNGSVNVRRYGTDEEISKSLT 627 Query: 433 EVINYASHRFSNN 445 + IN + Sbjct: 628 DFINEIDADVKSY 640 >gi|268596592|ref|ZP_06130759.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae FA19] gi|268601604|ref|ZP_06135771.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID18] gi|268550380|gb|EEZ45399.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae FA19] gi|268585735|gb|EEZ50411.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID18] Length = 580 Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats. Identities = 116/235 (49%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 11 MKASQFFISTLKEAPAEAAFASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 70 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+++ GPT EEV+ DI R Sbjct: 71 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHERDFCMGPTCEEVIADIVRK 130 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 131 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQATYDAMYDA 190 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 191 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIE 244 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 7/229 (3%) Query: 222 FCSKDFMDFPIPSENTDFDDIISLNSIVEQW----TAPYAATSDVHNEKLFDSLPEN--K 275 F K + DF + + A D+ N D P+ + Sbjct: 351 FTGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEFVDLRNVVEGDESPDGQGR 410 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D Sbjct: 411 LKLARGIEVGHVFQLRGKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDE 470 Query: 336 KGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KGIIW ++APF++ ++ + R+A ++IYA L G DV DD E+ G Sbjct: 471 KGIIWTKAMAPFEVVIVPMNYKKSDTVREAADRIYAELLAAGADVLLDDRDERAGVLLND 530 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 ++LLG P ++++G + + + VE R + +++ E++ + + Sbjct: 531 SELLGIPHRIVIGDRALKEGNVEYAERRDNEAQAVAIGEIVARVTASLN 579 >gi|75908528|ref|YP_322824.1| prolyl-tRNA synthetase [Anabaena variabilis ATCC 29413] gi|114152169|sp|Q3MAQ7|SYP_ANAVT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|75702253|gb|ABA21929.1| Prolyl-tRNA synthetase [Anabaena variabilis ATCC 29413] Length = 604 Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats. Identities = 114/240 (47%), Positives = 152/240 (63%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+++P DAEI SHKL+LR G I + GIY++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLRDDPADAEIPSHKLLLRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N GA E +P LQ ++LW ESGR+D+Y K M L DR ++ + GPTHEEV+T I Sbjct: 61 MNAAGAQECLLPQLQPSELWKESGRWDTYTKAEGIMFSLIDRREQQLGLGPTHEEVITAI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQ+Q KFRDE+RPRFG+MR REF+MKD YSF + + K +Y M Sbjct: 121 ARDMIRSYRQLPLHLYQLQTKFRDEIRPRFGLMRGREFIMKDGYSFHVDEDSLKKTYQDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 + +Y + R GL P+ A+SG IGG S EF+VLA+ GE +V + D + E Sbjct: 181 YQAYSNMLRRAGLAFRPVEADSGAIGGSGSTEFMVLAEAGEDEVLYTDDG-KYAANVEKA 239 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 60/168 (35%), Positives = 96/168 (57%), Gaps = 1/168 (0%) Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 SARGIEVGHIF GTKYS + AT+ G++ + MG YG+G R+ + +E S+D Sbjct: 431 LKSARGIEVGHIFQLGTKYSQALGATYTNEQGEEKPLVMGCYGVGVSRLAQSAVEQSYDK 490 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 GIIWP ++AP+ + +D + E++Y L++ G + DD E+ G +F A Sbjct: 491 DGIIWPVAIAPYHAIVTIPNINDAQQVEIAERLYTELNQSGVETLLDDRNERAGVKFKDA 550 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 DL+G P +++ G + +++ KVEI R T +++ ++EVI Sbjct: 551 DLIGIPYRIVTG-RAITNGKVEIVERATRQSQEIPIDEVITTLQQWIK 597 >gi|84687895|ref|ZP_01015762.1| threonyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654] gi|84664089|gb|EAQ10586.1| threonyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654] Length = 649 Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats. Identities = 79/446 (17%), Positives = 146/446 (32%), Gaps = 44/446 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K+ + + RD ++ L + + + G W P G + +R +Q Sbjct: 234 LKKHLTFLEEAEKRDHRRLGREMDLF--HMQEEAPGQVFWHPNGWTIYTVLQDYMRRQQQ 291 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDI 117 R G +E++ P + LW SG ++ Y + M + R P + I Sbjct: 292 RGGYVEVNTPQVVDRKLWEASGHWEKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQI 351 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 F +KSYR+LP + R E G+MR R F DA+ F T + + + Sbjct: 352 FNVGLKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFC-TEDQIESETER 410 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 I+ LG + ++ P S E D + Sbjct: 411 FISFLAGIYKDLGFPTYKIKFSDRPDTRAGSDE-----------------IWDKAEKALL 453 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + + + A Y + L D++ + + ++ F + Sbjct: 454 DATHKVTNDVELNPGEGAFYGPKLEF---VLTDAIGRDWQCGTLQVD----FVLPER--- 503 Query: 297 PMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 + A + G DG H + +G+ ++ H GK W + + Sbjct: 504 -LDANYIGEDGAKHRPVMLHRATLGSFERFIGILIEEHAGKLPFW------IAPRQVVVA 556 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + D ++ L G D E+I + P+ + +G K V D Sbjct: 557 SIVSDADDYVREVVDALRAKGVRAEADTRNEKINYKVREHSAGKVPVILAIGMKEVEDRT 616 Query: 416 VEIKHRLTGIREDMSLEEVINYASHR 441 V ++ ++L+EV+ S Sbjct: 617 VTLRRLGEKQTRVVALDEVVQELSTE 642 >gi|295425303|ref|ZP_06818006.1| threonine--tRNA ligase [Lactobacillus amylolyticus DSM 11664] gi|295065079|gb|EFG55984.1| threonine--tRNA ligase [Lactobacillus amylolyticus DSM 11664] Length = 659 Score = 232 bits (592), Expect = 8e-59, Method: Composition-based stats. Identities = 79/440 (17%), Positives = 155/440 (35%), Gaps = 34/440 (7%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + RD L L + + G+ W+P G V I + + G Sbjct: 247 RRQEIKERDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQ 304 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYR 126 + P L + D + SG + Y +M D D M P + IF+ HI+SYR Sbjct: 305 HVYTPVLMNLDAYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIFKHHIRSYR 364 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ + R E G+ R RE + D ++F + + K+ + ++ Sbjct: 365 DLPLRVAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQDE-FAKILKLIMDVY 423 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + R + F + + + DD+ Sbjct: 424 KDFDITDYYFRLS-------------YRDPKNTQKYFANDEMWERSQKMLKGAMDDLGLD 470 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y D+ + +L ++ +S ++ F ++ T+ G Sbjct: 471 YVEAEGEAAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPDRF----GLTYVGK 519 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DG++H M G + + I + +P +AP + +I + + + Sbjct: 520 DGEEHRPVMIHR--GIVGTMERFIAYLTEIYKGAFPTWLAPIQAEIIPVN--NDAHGEYA 575 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 EK+ L+K G D+ E++G + + P +++G + + + V ++ T Sbjct: 576 EKVRQELAKRGFRAEVDNRNEKLGYKIRESQTQKVPYTLVLGDEEMKSNSVNVRRYGTDE 635 Query: 426 REDMSLEEVINYASHRFSNN 445 SL++ IN + Sbjct: 636 EISKSLDDFINEIDADVKSY 655 >gi|294668560|ref|ZP_06733657.1| proline--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309523|gb|EFE50766.1| proline--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 569 Score = 232 bits (592), Expect = 8e-59, Method: Composition-based stats. Identities = 122/273 (44%), Positives = 173/273 (63%), Gaps = 5/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RL L+ P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCRIFTRLDLEFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIELAPTL 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + + + A N K DSL + Sbjct: 240 PLKGERATAQAELA----KVHTPNVKTIDSLVD 268 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 68/229 (29%), Positives = 105/229 (45%), Gaps = 7/229 (3%) Query: 222 FCSKDFMDFPIPSENTDFDDIISLNSIVEQW----TAPYAATSDVHNEKLFDSLPEN--K 275 F K + DF + + A D+ N D P+ + Sbjct: 341 FTGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEFVDLRNVVEGDESPDGQGR 400 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 RGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D Sbjct: 401 LKLTRGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDE 460 Query: 336 KGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KGIIW ++APF++ ++ + R+A +KIYA L G DV DD E+ G Sbjct: 461 KGIIWTKAMAPFEVVIVPMNYKKSDAVREAADKIYAELLAAGADVLLDDRDERAGVLLND 520 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 ++LLG P ++++G + + + VE R + + E+ Sbjct: 521 SELLGIPHRIVIGDRALKEGNVEYAERRNNEAQTVPTGEIAAKVLAALK 569 >gi|269960577|ref|ZP_06174949.1| prolyl-tRNA synthetase [Vibrio harveyi 1DA3] gi|269834654|gb|EEZ88741.1| prolyl-tRNA synthetase [Vibrio harveyi 1DA3] Length = 571 Score = 232 bits (592), Expect = 8e-59, Method: Composition-based stats. Identities = 112/237 (47%), Positives = 151/237 (63%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHTRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKEGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 64/190 (33%), Positives = 110/190 (57%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N D + + RGIEVGHIF G YS M+ G DGK+ ++M Sbjct: 382 GQVEDLRNVVEGDPSPCGQGTLMLKRGIEVGHIFQLGNVYSEAMNCGVLGPDGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVA+ IE +HD GIIWPD++APF+++++ + + ++A EK+YA L+ Sbjct: 442 GCYGIGVSRVVASAIEQNHDKYGIIWPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G +V +DD E+ G F+ +L+G P +++G + + + E K+R +G + +++ + Sbjct: 502 AMGIEVLFDDRKERPGVMFSDMELIGIPHTIVIGDRSMKEGNFEYKNRRSGEKTAVAMAD 561 Query: 434 VINYASHRFS 443 ++ + + Sbjct: 562 IVEHVKAQLQ 571 >gi|229168558|ref|ZP_04296281.1| Prolyl-tRNA synthetase [Bacillus cereus AH621] gi|228614964|gb|EEK72066.1| Prolyl-tRNA synthetase [Bacillus cereus AH621] Length = 566 Score = 232 bits (592), Expect = 8e-59, Method: Composition-based stats. Identities = 121/267 (45%), Positives = 166/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+++LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQASELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y+ ++ + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYSGLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + + D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAY-SNTSDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKALEKVATPDQKAIEEV 266 Score = 166 bits (419), Expect = 9e-39, Method: Composition-based stats. Identities = 75/190 (39%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTKPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP SVAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKSVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|320155572|ref|YP_004187951.1| prolyl-tRNA synthetase [Vibrio vulnificus MO6-24/O] gi|319930884|gb|ADV85748.1| prolyl-tRNA synthetase [Vibrio vulnificus MO6-24/O] Length = 571 Score = 232 bits (592), Expect = 8e-59, Method: Composition-based stats. Identities = 113/237 (47%), Positives = 152/237 (64%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHVRPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M + Sbjct: 121 EVSSYKQLPINLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL+ P+ A+SG IGG+ S EF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGNGSQEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 62/190 (32%), Positives = 111/190 (58%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 +D+ N D + + RGIEVGHIF G YS M+ ++GK+ ++M Sbjct: 382 GQVADLRNVVEGDPSPCGKGTLMLKRGIEVGHIFQLGNVYSEAMNCGVLDSNGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVAA IE ++D GIIWPD++APF+++++ + + ++A EK+YA L+ Sbjct: 442 GCYGIGVSRVVAAAIEQNNDKYGIIWPDALAPFQVAIVPMNMHKSERVQEAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G +V +DD E+ G F+ +L+G P +++G + + + E K+R +G + +++ + Sbjct: 502 AMGIEVLFDDRKERPGVMFSDMELIGIPHTIVIGDRSMDEGHFEYKNRRSGEKTPVAMAD 561 Query: 434 VINYASHRFS 443 ++ + + Sbjct: 562 IVEHIKAQLK 571 >gi|224058287|ref|XP_002194154.1| PREDICTED: prolyl-tRNA synthetase 2, mitochondrial (putative) [Taeniopygia guttata] Length = 470 Score = 232 bits (592), Expect = 8e-59, Method: Composition-based stats. Identities = 152/459 (33%), Positives = 226/459 (49%), Gaps = 47/459 (10%) Query: 2 RRSKYFLPI---------LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDN 52 R S+ F P+ + P + S +LML+ G+IH S G Y +LP +A++ Sbjct: 35 RLSQLFQPLALPVGGQVSSEARPGEPTCRSQRLMLQAGLIHPTSPGCYCYLPPTVRAMEK 94 Query: 53 VNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEE 112 + ++ EE G ++++P+L SA+LW SGR+D G E+ RL DR+D GPTHEE Sbjct: 95 LIQLMDEEMQAVGGQKLNLPSLCSAELWRASGRWDQMGPELFRLVDRHDHGYCLGPTHEE 154 Query: 113 VMT-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSK 171 V+T + SY+ LP YQ+ KFRDE +PRFG++RSREF MKD Y+FD + E ++ Sbjct: 155 VVTALVASQTGLSYKQLPLRLYQVTRKFRDEPKPRFGLLRSREFYMKDMYTFDSSEEAAR 214 Query: 172 HSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 +Y ++ +Y +F RLGL + ++A +G IGG SHEF + AD GE ++ Sbjct: 215 RTYEQVCAAYCSLFARLGLPFVKVQAATGSIGGSTSHEFQLPADIGEDRLLLCPQ----- 269 Query: 232 IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 A ++ E+ K +GIEVGH FY G Sbjct: 270 ---------------------GHFAAKVETLNREQPRAPTCGEKLTETKGIEVGHTFYLG 308 Query: 292 TKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 TKYS +A F A+ K +MG YG+G R++AA IE I WP +AP+++ Sbjct: 309 TKYSSVANAVFSSAENKPQLAEMGCYGLGVTRILAASIEVLSTEDSIRWPSLIAPYQLCF 368 Query: 352 INIKAHDQ---VCRDACEKIYARLSK-----VGCDVFWDDMGE-QIGSQFAVADLLGFPL 402 I K + E++Y L + G D DD + IG + A LG+P Sbjct: 369 IPPKRGSKEEEEGAALLERVYDELEEALPHLAG-DSVLDDRSQLTIGKRLKDAKRLGYPY 427 Query: 403 QVIVGSKFVSDSKV-EIKHRLTGIREDMSLEEVINYASH 440 V+ G + D V E+ ++ ++ E VI S Sbjct: 428 VVVAGKRVCEDPPVFEVWNQNASEVLFLTKEGVIELLSK 466 >gi|260495035|ref|ZP_05815164.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_33] gi|260197478|gb|EEW94996.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_33] Length = 567 Score = 232 bits (592), Expect = 8e-59, Method: Composition-based stats. Identities = 120/251 (47%), Positives = 164/251 (65%), Gaps = 1/251 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEIASHKLMLR GMI + + GIY++LPLG + + + I+REE Sbjct: 1 MRFSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLASGIYAYLPLGYRTIRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR+D G EMLRL DR+++ + PT EE++T I RS Sbjct: 61 MDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKDRHERGFVLSPTQEEMITAIVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y IQ KFRDE RPRFG+MR REF MKDAYSF + E + M + Sbjct: 121 DISSYKSLPINLYHIQTKFRDERRPRFGLMRGREFTMKDAYSFHTSQESLDKEFLNMRDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK P+ A+SG IGG S EF VLA++GE ++ S ++ E + Sbjct: 181 YTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYSD-GSEYAANIETAVSE 239 Query: 241 DIISLNSIVEQ 251 I +++ Sbjct: 240 LINPPKEELKE 250 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 75/186 (40%), Positives = 106/186 (56%), Gaps = 2/186 (1%) Query: 259 TSDVHNEKLFDSLP-ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K+ ++ K SARGIE G IF G KYS M+AT+ G+ HY+ MG Y Sbjct: 381 VADIRKVKVGENCITGGKLHSARGIECGQIFKLGDKYSKAMNATYLDEKGQSHYMLMGCY 440 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R +AA IE +D GIIWP S+AP+ + +I + ++ + EKIY L + Sbjct: 441 GIGVTRTMAAAIEQYNDENGIIWPVSIAPYIVDVIPVNIKNEAQVNLAEKIYNNLQEEKI 500 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 DV DD E+ G +F ADL+GFP +V+VG K + +VE+K R TG ++S E+IN Sbjct: 501 DVMLDDRDEKPGFKFKDADLIGFPFKVVVGKK-AEEGRVELKIRKTGETFEISQNEIINK 559 Query: 438 ASHRFS 443 Sbjct: 560 IKELMK 565 >gi|163941557|ref|YP_001646441.1| prolyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|226731430|sp|A9VT57|SYP_BACWK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|163863754|gb|ABY44813.1| prolyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] Length = 566 Score = 232 bits (592), Expect = 8e-59, Method: Composition-based stats. Identities = 122/267 (45%), Positives = 166/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+++LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQASELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y+ ++ + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYSGLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKALEKVATPDQKAIEEV 266 Score = 166 bits (419), Expect = 1e-38, Method: Composition-based stats. Identities = 75/190 (39%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTKPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP SVAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKSVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|222097264|ref|YP_002531321.1| prolyl-tRNA synthetase [Bacillus cereus Q1] gi|254782885|sp|B9IVA8|SYP_BACCQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|221241322|gb|ACM14032.1| prolyl-tRNA synthetase [Bacillus cereus Q1] Length = 566 Score = 232 bits (592), Expect = 8e-59, Method: Composition-based stats. Identities = 122/267 (45%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKALEKVATPDQKAIEEV 266 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|307294661|ref|ZP_07574503.1| threonyl-tRNA synthetase [Sphingobium chlorophenolicum L-1] gi|306879135|gb|EFN10353.1| threonyl-tRNA synthetase [Sphingobium chlorophenolicum L-1] Length = 660 Score = 232 bits (592), Expect = 8e-59, Method: Composition-based stats. Identities = 84/450 (18%), Positives = 148/450 (32%), Gaps = 48/450 (10%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD ++ L + Q + G W P G + A +R + G Sbjct: 237 LTRLEEAGKRDHRKLGAEMDLF--HLQQEAHGSVFWHPKGYLIWRELEAYMRRAIDEAGY 294 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK-------------AMIYGPTHEEV 113 E+ P + A W +SG + Y + M + D M P + Sbjct: 295 REVKTPQVMDARQWEQSGHWGKYRENMFVIPDEVPNVEDEGPLVSEAADWMALKPMNCPA 354 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IF+ IKSYR+LP FY+ R+E G+MR R+F DA+ F + + Sbjct: 355 HILIFKQGIKSYRDLPLRFYENGCCHRNEPHGALHGLMRVRQFTQDDAHIFCREDQIVEE 414 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 RI+ G + P + E A+ Sbjct: 415 -VRAFCALADRIYKDFGFTYSI-KLALRPEKRFGTEEMWDKAEEELRNAV--------AA 464 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 NT + A YA + H L D++ +V + Sbjct: 465 AGLNTPEYG----WEELPGEGAFYAPKLEWH---LTDAIGRTWQVGTIQSDRVLP----- 512 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + A++ G DG+ H + G+ ++ + GK +W V ++ Sbjct: 513 ---ERLDASYVGEDGERHRPVMLHRAIFGSYERFIGILIEHYAGKFPLWLAPVQAVVATI 569 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + D + + +L VG D E+I + L P ++VG + Sbjct: 570 V------SDADDYAQTVAEKLRAVGIRAETDVRNEKINYKVREHSLAKVPNLLVVGRREA 623 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHR 441 + V ++ + +S+E+VI + Sbjct: 624 DEGTVALRELGKEGQTILSVEDVIARLAKE 653 >gi|163737374|ref|ZP_02144791.1| threonyl-tRNA synthetase [Phaeobacter gallaeciensis BS107] gi|161388900|gb|EDQ13252.1| threonyl-tRNA synthetase [Phaeobacter gallaeciensis BS107] Length = 648 Score = 232 bits (592), Expect = 8e-59, Method: Composition-based stats. Identities = 82/443 (18%), Positives = 145/443 (32%), Gaps = 45/443 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD ++ L + + + G W P G K + +R Q+R Sbjct: 234 KAHLHMLEEAAKRDHRKLGREMNLF--HMQEEAPGQIFWHPNGWKIYTTLQDYMRRMQDR 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIY-----GPTHEEVMTDIF 118 G +E++ P + LW SG +D Y + M + D A P + +F Sbjct: 292 DGYVEVNTPQVVDRKLWEASGHWDKYQENMFIVEVDEDHAREKAVNALKPMNCPCHVQVF 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F D + F + + K Sbjct: 352 NQGLKSYRDLPLRMAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFCAEDQIESET-AKF 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +++ LG ++ + P S E D + Sbjct: 411 IAFLSKVYADLGFHDWTIKLSTRPEKRIGSDE-----------------SWDLVEKALGD 453 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 ++E A Y + L D++ N + ++ Sbjct: 454 ACKAAGYEYELLEGEGAFYGPKLEF---TLTDAIGRNWQCGTLQVDPNLP--------ER 502 Query: 298 MSATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + A F G DG H + +G+ ++ H GK W S+ Sbjct: 503 LDANFIGQDGSKHRPFMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASIT---- 558 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++ L G D E+I + + P+ + VG + V + V Sbjct: 559 --SDADDYVNEVVETLRAAGVRAEADIRNEKINYKVREHSVGKVPVILAVGHREVEERTV 616 Query: 417 EIKHRLTGIREDMSLEEVINYAS 439 ++ + +L+ V + Sbjct: 617 SVRRLGEKQTKVEALDAVTKALA 639 >gi|301310685|ref|ZP_07216624.1| threonine--tRNA ligase [Bacteroides sp. 20_3] gi|300832259|gb|EFK62890.1| threonine--tRNA ligase [Bacteroides sp. 20_3] Length = 649 Score = 232 bits (592), Expect = 8e-59, Method: Composition-based stats. Identities = 73/446 (16%), Positives = 140/446 (31%), Gaps = 40/446 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD ++ L KG+ WLP G + +R Q R Sbjct: 230 EYLTLLEEAKKRDHRKIGKEMDLFM-FSDTVGKGLPMWLPKGTALRLRLQEFLRRIQARY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + L++ SG Y YGK+ + + P + I+++ Sbjct: 289 NYQEVMCPPIGNKLLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F + + + + Sbjct: 349 RSYKDLPLRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKQE-FLNVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + ++ + D + + D + + Sbjct: 408 SIVFKTMNFENFEAQISLR--------------DKVNREKYIGSDENWEKAEQAIVEACE 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + +E A Y D + D++ ++ ++ Sbjct: 454 EKGLKAKIEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFQL 502 Query: 301 TFKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + GAD + H M R VA +IE + + Sbjct: 503 EYTGADNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLWLTPEQVCIMPI-------S 555 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + D +I L DD E+IG + +L P +IVG K + +V + Sbjct: 556 EKFNDYAWQIARELGNQEIRAIVDDRNEKIGRKIRDNELKRIPYMLIVGEKEAENGEVSV 615 Query: 419 KHRLTGIREDMSLEEVINYASHRFSN 444 + + G + M + + Sbjct: 616 RKQGEGDKGSMKIATFAALLNGEVEE 641 >gi|68536224|ref|YP_250929.1| prolyl-tRNA synthetase [Corynebacterium jeikeium K411] gi|260578924|ref|ZP_05846827.1| proline--tRNA ligase [Corynebacterium jeikeium ATCC 43734] gi|114152185|sp|Q4JV46|SYP_CORJK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|68263823|emb|CAI37311.1| proS [Corynebacterium jeikeium K411] gi|258602898|gb|EEW16172.1| proline--tRNA ligase [Corynebacterium jeikeium ATCC 43734] Length = 596 Score = 232 bits (592), Expect = 8e-59, Method: Composition-based stats. Identities = 119/384 (30%), Positives = 174/384 (45%), Gaps = 14/384 (3%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ SHKL++R G I + + G+YSWLPLG + L N+ A++REE Sbjct: 4 RMSQLFLRTLRDDPADAEVPSHKLLVRAGYIRRVAPGVYSWLPLGLRVLRNIEAVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+S P L + + +GR+ YG + RL DR + + GPTHEE+ T + +S Sbjct: 64 NAIGAQEISFPALLPREPYDTTGRWVEYGDALFRLKDRKNADYLLGPTHEEMFTSVVKSE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQ+Q K+RDE RPR G++R REF+MKD+YSF++ EG + SY +Y Sbjct: 124 YNSYKDFPVILYQVQTKYRDEERPRAGILRGREFIMKDSYSFNMDDEGLEESYQLHRKAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 IF RLG+K A SG +GG S EF+ +A GE F D+ E Sbjct: 184 QNIFDRLGIKYAICSATSGAMGGSASEEFLAVAANGE-DTFVRSTESDYAANVEAVVTQV 242 Query: 242 IISLNSIVEQWTAPY-AATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + Y S+ + + E + R +E Sbjct: 243 PPAQPIEGQPEAKEYETPDSETIEALVEWANSEGITIDGRAVEAADT--LKCIVIKVNDP 300 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G G V +E+S + + D K + Sbjct: 301 TLDEEGKPRGESLAGVLVPGNREVDMKRLEASMEPAQVELADEADFKKNPFLVKGYVGP- 359 Query: 361 CRDACEKIYARLSKVGCDVFWDDM 384 L+ G V D Sbjct: 360 ---------KGLAANGVRVLADPR 374 Score = 134 bits (336), Expect = 4e-29, Method: Composition-based stats. Identities = 65/194 (33%), Positives = 93/194 (47%), Gaps = 6/194 (3%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 + D P+ K ARGIE+GHIF G KY+ GK MG Sbjct: 405 GFVEAAEVLEGDPSPDGKGTLALARGIEIGHIFQLGRKYTEAFDVKILDESGKRSVPTMG 464 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R+V + E D G+ WP SVAPF + + I D +A ++ LS Sbjct: 465 SYGVGVSRLVGVIAEQMLDDSGLRWPASVAPFDVH-VVIANKDAAAGEAAVELVETLSND 523 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD G +F ++LLG PL V+VG + +D KVE+++RLTG ++ + Sbjct: 524 GLEVLFDDRPKVSPGVKFKDSELLGMPLVVVVG-RGFADGKVELRNRLTGETYEVDYTDA 582 Query: 435 INYASHRFS-NNRP 447 + A RP Sbjct: 583 LPEAKRALRGEARP 596 >gi|15673893|ref|NP_268068.1| theronyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] gi|281492524|ref|YP_003354504.1| threonyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147] gi|22654138|sp|Q9CED2|SYT_LACLA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|12724948|gb|AAK06009.1|AE006421_2 theronyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] gi|281376188|gb|ADA65679.1| Threonyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147] gi|326407464|gb|ADZ64535.1| threonyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56] Length = 646 Score = 232 bits (592), Expect = 8e-59, Method: Composition-based stats. Identities = 84/441 (19%), Positives = 167/441 (37%), Gaps = 35/441 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L + +E RD +L L + G WLP G + + +++ + G Sbjct: 232 LKLREEAKERDHRKLGRELDLF-FNDAELGAGTAYWLPAGATIRRIIERFVVDQEVKNGY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSY 125 + P + + + + +SG + Y ++M D D + M P + I++ H+ SY Sbjct: 291 QHVITPVMMNLNTYKQSGHWQHYHEDMYPPMDMGDGEEMELRPMNCPSHIAIYKHHVHSY 350 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + + R E G+ R RE + D ++F + + + ++K+ + + Sbjct: 351 RELPIRIAEFGMMHRYEKSGALSGLQRVREMTLNDGHTFVMLEQVQEE-FSKILQLIMDM 409 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDII 243 + G+ R D +T + D M + DD+ Sbjct: 410 YRDFGINDYSFRLS--------------YRDPKDTVKYFPDDEMWEKSQAMLKATMDDMN 455 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 E A Y D+ ++ +L + +S ++ + ++ Sbjct: 456 LDYVEAEGEAAFYGPKLDI---QVKTALGNEETLSTIQLDFLNP--------ENFDISYI 504 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 GADG+ H M G + + I + +P +AP + ++I + +++ D Sbjct: 505 GADGEKHRPVMIHR--GVISTLERFIAYLIEVYKGAFPTWLAPTQATIIPVN--NEIHAD 560 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 KI L G V D+ E++G + + P Q+++G + +D V I+ + Sbjct: 561 YAWKIQRELQDKGFRVVVDEANEKMGWKIRQSQTHKIPYQIVIGDQEQADGTVNIRRYGS 620 Query: 424 GIREDMSLEEVINYASHRFSN 444 + + LEE I S +N Sbjct: 621 KETKVIPLEEFIENISADVAN 641 >gi|88810462|ref|ZP_01125719.1| prolyl-tRNA synthetase [Nitrococcus mobilis Nb-231] gi|88792092|gb|EAR23202.1| prolyl-tRNA synthetase [Nitrococcus mobilis Nb-231] Length = 569 Score = 232 bits (592), Expect = 8e-59, Method: Composition-based stats. Identities = 121/238 (50%), Positives = 163/238 (68%), Gaps = 1/238 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + + L +E P DAEI SH+LMLR G+I + G+Y+WLPLG + L NV ++REE Sbjct: 1 MRVTGFPLFTSREIPADAEIISHQLMLRAGLIARLGAGLYTWLPLGLRVLRNVERVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G++E+ +P +Q A+LW ESGR++ YG E+LRL DR+ + +GPTHEEV+TD+ R Sbjct: 61 MDRIGSLEVLMPAVQPAELWQESGRWEQYGPELLRLKDRHAREFCFGPTHEEVITDLVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP T+YQIQ KFRDE+RPRFGVMR+REFLMKDAYSF L + +Y M + Sbjct: 121 EIHSYRQLPVTYYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLDQASLEATYRAMHAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 Y RIF RL L +RA++G IGG +S EF VLAD+GE + + ++ +E Sbjct: 181 YSRIFQRLNLDFRAVRADTGAIGGSVSEEFHVLADSGEDAIAVCRHC-NYAANTELAQ 237 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 3/194 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A +D+ + + P RGIEVGH+F G KYS M A G Sbjct: 372 GRDAALPERADLRTVRSGEGCPSCAGSLQIKRGIEVGHVFQLGAKYSESMDARVLNEHGD 431 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEK 367 + MG YGIG RVVAA IE +HD +GIIWP +APF++++++I AH + + E+ Sbjct: 432 QVPMIMGCYGIGVSRVVAAAIEQNHDERGIIWPTPLAPFQVAIVSINAHRSEAVHNEAER 491 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 ++ L G + WDD + G +FA +L+G P ++++ + +S VE + R Sbjct: 492 LHEALGAAGLEPLWDDREARPGVKFADMELIGIPHRLVISDRGLSAGTVEYRGRSEPTSR 551 Query: 428 DMSLEEVINYASHR 441 + E V+ + Sbjct: 552 HLPCERVVEFLRDL 565 >gi|328944057|ref|ZP_08241522.1| proline--tRNA ligase [Atopobium vaginae DSM 15829] gi|327492026|gb|EGF23800.1| proline--tRNA ligase [Atopobium vaginae DSM 15829] Length = 616 Score = 232 bits (592), Expect = 8e-59, Method: Composition-based stats. Identities = 115/261 (44%), Positives = 161/261 (61%), Gaps = 1/261 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R SK + P L+E+P DA+IASHKL++R GMI + + G+YS+LPL +++ + +IIREE Sbjct: 47 RMSKLYAPTLKEDPTDADIASHKLLVRAGMIRKAAAGLYSYLPLAWRSIQKIESIIREEM 106 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 A EM P L A+LW +SGR+ +YG E++RL DR+D GPTHEE TD+ R+ Sbjct: 107 EAIDAQEMLAPILTDAELWHQSGRWGAYGPELMRLTDRHDHEYALGPTHEETFTDLIRNE 166 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +KSY++LP T Y IQ KFRDE RPRFG+MR REF+MKD YSF E Y + +Y Sbjct: 167 LKSYKDLPVTLYHIQDKFRDERRPRFGLMRGREFIMKDGYSFCANQESLHECYEQEKDAY 226 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTDFD 240 I R GL+++P+ A+SG IGGD S EF+ LAD GE + ++C + + Sbjct: 227 ATIARRCGLRAVPVVADSGQIGGDTSVEFMALADAGEAELIYCDACDYAADTEAAVGQIN 286 Query: 241 DIISLNSIVEQWTAPYAATSD 261 + + E+ P T + Sbjct: 287 VLDDEVAACEKIKTPACQTIE 307 Score = 167 bits (422), Expect = 5e-39, Method: Composition-based stats. Identities = 80/194 (41%), Positives = 114/194 (58%), Gaps = 2/194 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 D+ + DS P SARGIE+ +F GTKYS M ATF DG + MG Sbjct: 421 EWQDLIVTEAGDSCPCCSAALKSARGIEISQVFQLGTKYSKAMGATFMDEDGTEKPFIMG 480 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R +AAV+E SHD GIIWP SVAP+++++I + HD+ +++ L K Sbjct: 481 CYGIGVSRTLAAVVEQSHDEHGIIWPVSVAPYEVAVIPLDVHDETVWPVAQRLAEGLIKA 540 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD GE+ G +F ADL+GFP QV+ G K ++ + VE+K+R TG R ++ ++EV+ Sbjct: 541 GIEVIVDDRGERPGIKFNDADLMGFPYQVVCGKKALAHACVEVKNRATGERTEVPVDEVV 600 Query: 436 NYASHRFSNNRPVL 449 ++ H R L Sbjct: 601 DHLVHEIVPQRQGL 614 >gi|294499151|ref|YP_003562851.1| threonyl-tRNA synthetase [Bacillus megaterium QM B1551] gi|294349088|gb|ADE69417.1| threonyl-tRNA synthetase [Bacillus megaterium QM B1551] Length = 405 Score = 232 bits (592), Expect = 9e-59, Method: Composition-based stats. Identities = 79/438 (18%), Positives = 164/438 (37%), Gaps = 41/438 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 ++ R+ + +L L M + + G+ +LP G + + +++ + G E+ Sbjct: 5 MEAEKRNHQKLGQELELF--MSIEEAPGMPFFLPNGMIIRNELENYWKQKHYKAGYQEIK 62 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + +LW +SG ++ Y + M ++ +++ P + +F S +SYR LP Sbjct: 63 TPIMMKQELWEQSGHWEHYHENM-YFSNVDEQNYAIKPMNCPGAILLFSSKRRSYRELPI 121 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + ++ L R EL G++R R F DA+ F + ++++ F+ Sbjct: 122 RYAELGLVHRHELSGSLNGLLRVRSFTQDDAHLFV--ELSQIEAEISRILAFIHDFYSHF 179 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + P + E A+ S + + + Sbjct: 180 GFDYKVELSTRPEKFMGNIETWNQAEK-----------------SLQSVLSEKGLDYQVN 222 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 E A Y D H + DSL + + ++ F K+ + G D K Sbjct: 223 EGDGAFYGPKIDFH---ILDSLGRSWQCGTVQLD----FLMPEKFDCM----YIGEDNKP 271 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 H + G++ A++ ++G+ +W V + + + K+ Sbjct: 272 HRPVMIHRAIYGSVERFMAILIEHYEGQFPLWLAPVQLKLLPIAP------PHVEYAYKV 325 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 L G V DD E+IG + A++ P ++G K V + + ++ Sbjct: 326 KHELELKGYRVEVDDRIEKIGLKIREAEMQKVPYMAVIGDKEVENESLAMRKHGKKNIGT 385 Query: 429 MSLEEVINYASHRFSNNR 446 +S+EE + + ++NR Sbjct: 386 VSMEEAAVHLNKEKNSNR 403 >gi|254294721|ref|YP_003060744.1| threonyl-tRNA synthetase [Hirschia baltica ATCC 49814] gi|254043252|gb|ACT60047.1| threonyl-tRNA synthetase [Hirschia baltica ATCC 49814] Length = 654 Score = 232 bits (592), Expect = 9e-59, Method: Composition-based stats. Identities = 82/451 (18%), Positives = 154/451 (34%), Gaps = 54/451 (11%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + + RD ++L L + ++G W P G + A IR Q+ G Sbjct: 232 YLVRLEEAEKRDHRKLGNQLDLF--HLQSEAQGSVFWHPNGFMIWRQLEAYIRRRQDDDG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADR-------------NDKAMIYGPTHEE 112 +E+ P L ++ W +SG + + + M + D + M P + Sbjct: 290 YVEVKTPQLLNSVFWEQSGHWSKFRENMFVVPDEIPSVEEEGPVLSGEGELMALKPMNCP 349 Query: 113 VMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSK 171 IF+ +SYR+LP + R+E G+MR R+ DA+ F + + Sbjct: 350 AHVQIFKQGTRSYRDLPLRMAEFGCCHRNEPHGALHGIMRVRQMTQDDAHIFCREDQVAN 409 Query: 172 HSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 + + + R++ GL I + + P + E D Sbjct: 410 ET-LRFLNLFKRVYGDFGLDQISYKLATRPEQRAGNDE-----------------TWDQA 451 Query: 232 IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 + T ++ E A Y + H L D++ + ++ Sbjct: 452 EGALATALNEAGLEFDYAEGEGAFYGPKLEFH---LTDAIGRTWQCGTLQLDYVLP---- 504 Query: 292 TKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 + AT+ G DG+ H + G ++ ++ G +W + Sbjct: 505 ----ERLDATYVGEDGEKHRPVMLHRAVFGTFERFMGILIENYAGAFPMWLAPTQVAIAT 560 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 + EK+ ARL G V D E+I + + P+ ++G Sbjct: 561 ITP------KADAYAEKVAARLRAKGIRVELDLRHEKINYKVREHSHMKVPVIAVIGMNE 614 Query: 411 VSDSKVEIKHRLTGIR--EDMSLEEVINYAS 439 + K+ ++ G E +SL+E S Sbjct: 615 AEEEKLALRRFGAGNARPEILSLDEACQLLS 645 >gi|71064999|ref|YP_263726.1| prolyl-tRNA synthetase [Psychrobacter arcticus 273-4] gi|114152234|sp|Q4FUL6|SYP_PSYA2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|71037984|gb|AAZ18292.1| prolyl-tRNA synthetase, class IIa [Psychrobacter arcticus 273-4] Length = 572 Score = 232 bits (592), Expect = 9e-59, Method: Composition-based stats. Identities = 112/235 (47%), Positives = 159/235 (67%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++ L+E P DA+IAS +LM+R G+I + + G+Y WLP+G + L V I+REE Sbjct: 1 MKASQFLFATLKETPSDADIASSQLMVRAGLIRKIASGLYIWLPMGLRVLQKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P Q A+LW +GR++ YG E+LR DR+D+ + GPTHEEV+T++ + Sbjct: 61 MQNIGAQEVLMPMTQPAELWQMTGRFNDYGPELLRFKDRHDRDFVLGPTHEEVITNLAQG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP TF+QIQ KFRDE+RPRFGVMR+REF MKDAYSF + +Y+ M+ + Sbjct: 121 ELRSYKQLPITFFQIQNKFRDEIRPRFGVMRAREFTMKDAYSFHVDQASLAKTYDDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL ++A++G IGG SHEF VLAD+GE + S ++ E Sbjct: 181 YTRIFTRLGLDFRAVQADTGSIGGFASHEFHVLADSGEDDIAFSDS-SEYAANVE 234 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 106/199 (53%), Gaps = 8/199 (4%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A D+ N D P+ K RGIEVGHIF G KYS M+ T G DGK Sbjct: 374 ERDANITRIVDIRNVNQGDPSPDGKGTLQIKRGIEVGHIFQLGNKYSQAMNCTVSGDDGK 433 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA------PFKISLINIKAHDQVCR 362 + MG YGIG R++AA IE ++D GI+WP + PF+++++ +K+ ++ Sbjct: 434 PVTLMMGCYGIGVSRIIAAAIEQNNDENGIMWPLTPNISDSLAPFEVAIVPMKSKEETVM 493 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +Y L +G +V DD E+ G +FA +L+G P +++V + +++ K E +R Sbjct: 494 QTATALYDELKALGVNVLLDDRNERPGVKFADLELIGIPHRIVVSDRNLAEDKYEYINRR 553 Query: 423 TGIREDMSLEEVINYASHR 441 ++ +S +EV+ S + Sbjct: 554 DTEKQLLSRDEVLAKVSSK 572 >gi|116492462|ref|YP_804197.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745] gi|122266074|sp|Q03GB7|SYT_PEDPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|116102612|gb|ABJ67755.1| Ser-tRNA(Thr) hydrolase [Pediococcus pentosaceus ATCC 25745] Length = 648 Score = 232 bits (592), Expect = 9e-59, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 150/444 (33%), Gaps = 39/444 (8%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 L +E RD + + L L + + G+ W+P G ++ I +++ + G Sbjct: 233 LERQKEAHERDHRVIGNNLDLF--FVDPKVGAGLPYWMPNGATIRRSIERYIIDKEVKHG 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKS 124 + P L + D + SG + Y ++M D D M P + +++ HI+S Sbjct: 291 YQHVYTPVLMNLDAYKTSGHWQHYREDMFPPMDMGDGEMLELRPMNCPSHIQVYKHHIRS 350 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR LP ++ + R E ++ + + + P+ + + K+ + + Sbjct: 351 YRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVAPDQIQAEFKKVLQLMVEV 410 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDII 243 + + R D T+ + D M S DD+ Sbjct: 411 YRDFNITDYTFRLS--------------YRDPANTEKYFDDDEMWNKSQSMLKAAMDDLG 456 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 E A Y DV + +L + +S ++ F + Sbjct: 457 LDYVEAEGEAAFYGPKLDVQTKT---ALGNEETLSTIQLD----FMLP----KQFDLHYV 505 Query: 304 GADGKDHYVQMGSYGIG--AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 GADG++H M G+ R A +IE + I D + Sbjct: 506 GADGEEHRPVMIHRGLVSTMERFTAYLIEMYKGAFPTWLAP------KQVTIIPVKDDLH 559 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +K+ + V D E++G + A P ++VG + ++ V ++H Sbjct: 560 GAYADKLREEMVDKDIRVEVDHRNEKMGYKIREAQTQKIPYILVVGDNELENNSVSVRHY 619 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 ++ + + IN + Sbjct: 620 GEDDSKNEASADFINNIVREIESY 643 >gi|304382923|ref|ZP_07365405.1| threonine--tRNA ligase [Prevotella marshii DSM 16973] gi|304335948|gb|EFM02196.1| threonine--tRNA ligase [Prevotella marshii DSM 16973] Length = 654 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 81/443 (18%), Positives = 160/443 (36%), Gaps = 36/443 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L + KG+ WLP G + + ++R+ Q Sbjct: 232 EYLVMLEEAKKRDHRKIGKEMELFM-FSERVGKGLPIWLPKGTELRLRLQGMLRKIQKNY 290 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P + S +L+V SG Y YGK+ + D+ + P + ++F Sbjct: 291 GYQEVITPHIGSKNLYVTSGHYAHYGKDSFQPIHTPEEDEEYMLKPMNCPHHCEVFSWKP 350 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + +R E G+ R R F DA+ F + + ++ Sbjct: 351 RSYKDLPLRIAEFGTVYRYEKSGELHGLTRVRSFTQDDAHIFCRPEQVKSE-FLRVMDII 409 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F K++ + D + + + D + + Sbjct: 410 QTVFKVFDFKNVEAQISLR--------------DPNDREKYIGSDEVWEHSEQSIIEACK 455 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 LN+ + A Y D + D++ ++ ++ ++ L +A Sbjct: 456 EKGLNAKIAYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDY----NLPQRFKLEYTA 508 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + K V + G+M AV+ G +W + I + Sbjct: 509 ---DDNSKQTPVMIHRAPFGSMERFTAVLIEHTAGHFPLW------LTPDQVAILPISEK 559 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D K+ L VG D+ E+IG + ++ P VIVG K ++ V ++ Sbjct: 560 FNDYARKVAHYLDSVGVRANIDERNEKIGRKIRDNEIKRVPYMVIVGEKEAAEGLVSMRK 619 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 + G + MS+E+ + + Sbjct: 620 QGGGEQATMSMEDFATRINEEVA 642 >gi|320093816|ref|ZP_08025661.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338] gi|319979249|gb|EFW10747.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338] Length = 669 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 74/441 (16%), Positives = 144/441 (32%), Gaps = 27/441 (6%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + L+E R D +L L + + G+ + P G + +RE G Sbjct: 242 YQERLKEAERRDHRRLGAELDLFS-FPEEIGPGLPVFHPKGGVLKRVMEDYVREAHIANG 300 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + A+L+ SG Y M D +A + + IFRS +SY Sbjct: 301 FQYVGTPHISKAELFHTSGHLPYYADGMFPPMDDEGQAYYLKAMNCPMHNLIFRSRGRSY 360 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP F++ +R+E G+ R R D++S+ + + L + Sbjct: 361 RELPLRFFEFGTVYRNEKSGVLQGLTRVRSITQDDSHSYCTPEQAPGE-VRHLLTFVLTL 419 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G++ + + G +FI + E ++ D + Sbjct: 420 LKDFGMEDFYLEVSTRDEDGAKKDKFIG---SDEQWADATRILADIAAE----CAQENGL 472 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + + D++ ++S + FG +Y+ A Sbjct: 473 RVVDDPGGAAFYGPKI---SVQAKDAIRRTWQMSTIQYDFNQPHRFGLEYTAADGA---- 525 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + V + S GA+ V+ + G W + + D Sbjct: 526 ---RHEPVMIHSAKFGAIERFIGVLTEHYAGAFPAW------LAPVQVRLVPVASAFDDY 576 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++ A+L + G V D ++ G + A P +I G + V + R Sbjct: 577 VEEVAAKLRERGIRVETDLSDDRFGKKIRNAAKEKVPFTLIAGGEDAEAGAVSFRLRDGS 636 Query: 425 IREDMSLEEVINYASHRFSNN 445 + ++ + + ++ Sbjct: 637 QHNGIPVDRAVELIARHVASR 657 >gi|269126329|ref|YP_003299699.1| threonyl-tRNA synthetase [Thermomonospora curvata DSM 43183] gi|268311287|gb|ACY97661.1| threonyl-tRNA synthetase [Thermomonospora curvata DSM 43183] Length = 684 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 77/444 (17%), Positives = 148/444 (33%), Gaps = 37/444 (8%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + G+ W P G + R+ G Sbjct: 276 YLKMLEEAEKRDHRKLGVELDLFS-FPSAIGGGLAVWHPKGGIVRKVMEDYSRKRHLEAG 334 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P L + L+ SG D Y + M + + P + + IF++ +SY Sbjct: 335 YEFVVTPHLSKSTLFETSGHLDWYAEGMYPPMELDGATYYPKPMNCPMHIMIFKARGRSY 394 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP +++ +R E G+ R+R F DA+ F + ++ + + + Sbjct: 395 RELPLRMFELGTVYRYEKSGVLHGLTRARGFTQDDAHIFVAPDQLAEEL-ASLLKFVVGL 453 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 GL EF T + + + + Sbjct: 454 LRDYGLT-----------------EFEAELATRPEKYVGEIADWEKAQAALEHALQEAGL 496 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A YA DVH + D++ ++S +++ ++ L A Sbjct: 497 PYVIAEGEGAFYAPKIDVH---IRDAIGRRWQLSTLQVDL----QLPQRFDLEFQAA--- 546 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + + G++ A++ + P +AP ++ I I A Sbjct: 547 DGTRQRPYMIHRALFGSVERFFAILL---EHYAGALPPWLAPVQVVGIPIGASHVPHL-- 601 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 EK+ A+L G D +++ + A P ++ G VS V ++R Sbjct: 602 -EKVVAQLRARGIRAEVDASDDRMQKKIRNAQKAKIPYMLLAGDDDVSKDAVSFRYRSGE 660 Query: 425 IREDMSLEEVINYASHRFSNNRPV 448 + + + E + + Sbjct: 661 QKNGVPIPEAVEEIVRAVEERIQI 684 >gi|257060371|ref|YP_003138259.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 8802] gi|256590537|gb|ACV01424.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 8802] Length = 598 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 114/240 (47%), Positives = 153/240 (63%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + GIY++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLREDPAEAEIPSHKLLLRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N GA E +P LQ A+LW ESGR+++Y K M L DR D + GPTHEEV+T I Sbjct: 61 MNAAGAQECLLPQLQPAELWRESGRWETYTKAEGIMFSLIDRRDTELGLGPTHEEVITTI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + + K +Y M Sbjct: 121 AKEMIRSYRQLPVNLYQIQSKFRDEIRPRFGLMRGREFIMKDAYSFHASEDSLKETYQAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y + R GL+ ++A+SG IGG S EF++LA+ GE +V ++D + E Sbjct: 181 DQAYRNMITRCGLEFRAVQADSGAIGGSASQEFMILAEAGEDEVLYTEDG-KYAANVEKA 239 Score = 169 bits (428), Expect = 9e-40, Method: Composition-based stats. Identities = 61/172 (35%), Positives = 98/172 (56%), Gaps = 1/172 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P +ARGIEVGHIF G KYS M ATF G++ + MG YG+G R+ A +E Sbjct: 427 PIQTLQTARGIEVGHIFQLGVKYSQAMGATFTNEQGEEKPLIMGCYGVGVSRLAQAAVEQ 486 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 S+D GIIWP ++AP+ ++ +D + EK+Y L+KVG + DD E+ G + Sbjct: 487 SYDKDGIIWPVAIAPYHAVVVIPNINDAQQVEVAEKLYTELNKVGVETLLDDRDERAGVK 546 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 F A+L+G P +++ G + + KVE+ R T +++++++V+ + Sbjct: 547 FKDAELIGIPYRIVTG-RSLQSGKVELVERSTKNSQEIAIDQVVETLKKLIN 597 >gi|218248302|ref|YP_002373673.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 8801] gi|226699137|sp|B7K1H5|SYP_CYAP8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|218168780|gb|ACK67517.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 8801] Length = 598 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 114/240 (47%), Positives = 153/240 (63%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + GIY++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLREDPAEAEIPSHKLLLRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N GA E +P LQ A+LW ESGR+++Y K M L DR D + GPTHEEV+T I Sbjct: 61 MNAAGAQECLLPQLQPAELWRESGRWETYTKAEGIMFSLIDRRDTELGLGPTHEEVITTI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + + K +Y M Sbjct: 121 AKEMIRSYRQLPVNLYQIQSKFRDEIRPRFGLMRGREFIMKDAYSFHASEDSLKETYQAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y + R GL+ ++A+SG IGG S EF++LA+ GE +V ++D + E Sbjct: 181 DQAYRNMITRCGLEFRAVQADSGAIGGSASQEFMILAEAGEDEVLYTEDG-KYAANVEKA 239 Score = 169 bits (428), Expect = 9e-40, Method: Composition-based stats. Identities = 61/172 (35%), Positives = 98/172 (56%), Gaps = 1/172 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P +ARGIEVGHIF G KYS M ATF G++ + MG YG+G R+ A +E Sbjct: 427 PIQTLQTARGIEVGHIFQLGVKYSQAMGATFTNEQGEEKPLIMGCYGVGVSRLAQAAVEQ 486 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 S+D GIIWP ++AP+ ++ +D + EK+Y L+KVG + DD E+ G + Sbjct: 487 SYDKDGIIWPVAIAPYHAVVVIPNINDAQQVEVAEKLYTELNKVGVETLLDDRDERAGVK 546 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 F A+L+G P +++ G + + KVE+ R T +++++++V+ + Sbjct: 547 FKDAELIGIPYRIVTG-RSLQSGKVELVERSTKNSQEIAIDQVVETLKKLIN 597 >gi|303325499|ref|ZP_07355942.1| threonine--tRNA ligase [Desulfovibrio sp. 3_1_syn3] gi|302863415|gb|EFL86346.1| threonine--tRNA ligase [Desulfovibrio sp. 3_1_syn3] Length = 648 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 82/437 (18%), Positives = 142/437 (32%), Gaps = 43/437 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E R D +L L + G+ WLP G + R+E + G Sbjct: 234 YLKQLEEAKRRDHRKLGRELSLFA-FQEDVAPGMVFWLPKGMLVRAILEDFWRKEHLKRG 292 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P L + W SG YD Y + M D A P + I+++ ++SY Sbjct: 293 YDMVQGPQLLRVETWQRSGHYDHYRENM-YFTRIEDDAYGIKPMNCIAHMLIYKNELRSY 351 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++++ + R E G++R R+F DA+ + + + Sbjct: 352 RDLPQRYFELGVVHRHEKSGVLHGLLRVRQFTQDDAHILCAPEQLEGE-ILGVIHLIRDL 410 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 H G + V T + + + + + Sbjct: 411 MHLFGFQYK------------------VAVSTRPESSIGTDEAWELATNALIQAVEKAGL 452 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I A Y DV L D + + S ++ F ++ T+ G Sbjct: 453 PYEINAGDGAFYGPKIDVR---LLDCIGREWQCSTIQVD----FTLPERFD----LTYVG 501 Query: 305 ADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG+ H M I R + +IE A + Sbjct: 502 QDGERHRPVMVHRAIMGSLERFIGVLIEQYAGALPAWLAPEQARLLTVT-------EAGD 554 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 E++ L +G V D E++G + A + P ++VG K V V ++ R Sbjct: 555 ATVERMRGELQALGIRVTADTRNEKLGFKVREAQVAKVPYILVVGEKEVQADGVNVRLRS 614 Query: 423 TGIREDMSLEEVINYAS 439 S+ +V Sbjct: 615 GENLGLKSIADVAALIR 631 >gi|22298319|ref|NP_681566.1| prolyl-tRNA synthetase [Thermosynechococcus elongatus BP-1] gi|81844949|sp|Q8DKT0|SYP_THEEB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|22294498|dbj|BAC08328.1| proline-tRNA ligase [Thermosynechococcus elongatus BP-1] Length = 602 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 127/275 (46%), Positives = 165/275 (60%), Gaps = 7/275 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L++ P +AEI SHKL+LR G I + + GIYS+LPL + L V+AI+REE Sbjct: 1 MRLSQMLFVTLRDEPAEAEIPSHKLLLRAGYIRRIASGIYSYLPLMWRVLQKVSAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 NR+GA+E +P LQ A+LW ESGR+D+Y K M L DR + + GPTHEEV+T + Sbjct: 61 MNRSGALECLLPQLQPAELWQESGRWDTYTKAEGIMFSLTDRAQRQLGLGPTHEEVITAL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF K +Y M Sbjct: 121 AKDLIRSYRQLPVHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHADVASLKETYQVM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 + +Y RI R GL + A+SG IGG SHEF+VLA GE +V + D + E Sbjct: 181 YDTYSRILQRCGLTFRAVEADSGAIGGSGSHEFMVLAAAGEDEVLYTADGQ-YAANVEKA 239 Query: 238 ---DFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 D + + V P AAT D E+L Sbjct: 240 VSLPPDAVPTTYKTVATLDTPNAATIDALVEQLQC 274 Score = 172 bits (436), Expect = 9e-41, Method: Composition-based stats. Identities = 62/172 (36%), Positives = 98/172 (56%), Gaps = 1/172 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P +ARGIE+GHIF GTKYS M AT+ G++ + MG YGIG R+ A +E Sbjct: 427 PTQHLEAARGIEIGHIFQLGTKYSEAMKATYTNEQGEEVPLVMGCYGIGISRLAQAAVEQ 486 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 HD +GI+WP ++AP+++ ++ D A +Y +L G +V DD E+ G + Sbjct: 487 HHDAQGIVWPLAIAPYQVIIVVPNIGDAQQMQAATDLYEQLQAAGIEVLLDDRDERAGVK 546 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 F ADL+G P +++ G + +++ +VE+ R TG + + L EV+ Y + Sbjct: 547 FKDADLIGIPYRLVTG-RAIANGEVELIIRATGAKSTLPLTEVVRYLQKEIA 597 >gi|288575624|ref|ZP_05977335.2| proline--tRNA ligase [Neisseria mucosa ATCC 25996] gi|288567367|gb|EFC88927.1| proline--tRNA ligase [Neisseria mucosa ATCC 25996] Length = 581 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 122/273 (44%), Positives = 173/273 (63%), Gaps = 5/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 12 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 71 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 72 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 131 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 132 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 191 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL+ P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 192 YCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIELAPTL 250 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + + + N K DSL + Sbjct: 251 PLKGERAAAQAEL----TKVHTPNVKTIDSLVD 279 Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats. Identities = 69/227 (30%), Positives = 107/227 (47%), Gaps = 7/227 (3%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQW----TAPYAATSDVHNEKLFDSLPEN--KRVS 278 K + DF + + A D+ N D P+ + Sbjct: 355 KVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEFVDLRNVVEGDESPDGQGRLKL 414 Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D KGI Sbjct: 415 ARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGI 474 Query: 339 IWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IW ++APF++ ++ + R+A +KIYA L G DV DD E+ G ++L Sbjct: 475 IWTKAMAPFEVVIVPMNYKKSDAVREAADKIYAELLAAGADVLLDDRDERAGVLLNDSEL 534 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 LG P ++++G + + + VE R + + L E+ + Sbjct: 535 LGIPHRIVIGDRALKEGNVEYAERRDNQAQTVGLNEIAGKVLAALKD 581 >gi|156975521|ref|YP_001446428.1| prolyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116] gi|166980171|sp|A7N1W0|SYP_VIBHB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|156527115|gb|ABU72201.1| hypothetical protein VIBHAR_03253 [Vibrio harveyi ATCC BAA-1116] Length = 571 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 112/237 (47%), Positives = 151/237 (63%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHTRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKEGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 172 bits (436), Expect = 9e-41, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 112/206 (54%), Gaps = 3/206 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPM 298 D I D+ N D + + RGIEVGHIF G YS M Sbjct: 366 DDKHYFGINWGRDVELGQVEDLRNVVEGDPSPCGQGTLMLKRGIEVGHIFQLGNVYSEAM 425 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 + G DGK+ ++MG YGIG RVVA+ IE +HD GIIWPD++APF+++++ + Sbjct: 426 NCGVLGPDGKNVILEMGCYGIGVSRVVASAIEQNHDKYGIIWPDALAPFQVAIVPMNMHK 485 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + ++A EK+YA L+ +G +V +DD E+ G F+ +L+G P +++G + + + E Sbjct: 486 SEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFSDMELIGIPHTIVIGDRSMKEGNFE 545 Query: 418 IKHRLTGIREDMSLEEVINYASHRFS 443 K+R +G + +++ +++ + + Sbjct: 546 YKNRRSGEKTAVAMADIVEHVKAQLQ 571 >gi|312898748|ref|ZP_07758137.1| prolyl-tRNA synthetase [Megasphaera micronuciformis F0359] gi|310620179|gb|EFQ03750.1| prolyl-tRNA synthetase [Megasphaera micronuciformis F0359] Length = 574 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 124/286 (43%), Positives = 182/286 (63%), Gaps = 4/286 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK + P L+++P +A++ASHKLML+ GM+ +++ G+YS+LPLG+K V IIR+E Sbjct: 1 MLASKLYAPTLRDDPAEADVASHKLMLKAGMLRKNAAGLYSFLPLGRKVCLKVENIIRKE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GA E+ +P +Q A++W E+GR+D YG EM +L DR+D GPTHEE++T + R+ Sbjct: 61 MNRSGAQEVMMPIVQPAEIWRETGRWDVYGPEMFKLKDRHDNEYCLGPTHEELITTLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP +Q+Q K+RDE+RPRFG+MRSREF+MKDAYSFD+ EG SY M+ + Sbjct: 121 ELRSYKQLPVNLWQMQNKYRDEIRPRFGLMRSREFVMKDAYSFDVDREGMIKSYESMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF G++ P+ A+SG IGG+ SHEF+ LA GE V F E + Sbjct: 181 YSRIFTECGIEYRPVLADSGQIGGNYSHEFMALAKAGEADVVICTKC-GFAANVEKAVPN 239 Query: 241 DIISLN---SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 +IS + E + P AT E++ + + + A I+ Sbjct: 240 TLISEDEELHEAELFETPECATIQDLVEQVKVPIEKTIKAVAFDID 285 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 74/194 (38%), Positives = 106/194 (54%), Gaps = 4/194 (2%) Query: 259 TSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 T+ + D PE +GIEVG +F GTKYS ++ATF DGK MG Sbjct: 382 TATIRLITEQDVCPECGGEVKLTQGIEVGQVFGLGTKYSESLNATFLDKDGKAKPFVMGC 441 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R VAA IE HD KGIIWP + APF+ ++ + D+ +K+Y L + Sbjct: 442 YGIGVTRTVAATIEQLHDDKGIIWPVATAPFEAVVLPVNMKDEAIVSVAKKLYDELLDLD 501 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD E+ G +F ADL+G+P+++ VGSK +D KVE+K R T E++++E Sbjct: 502 VDVLLDDRDERAGVKFNDADLIGYPVRLTVGSK-AADGKVEVKIRRTDEEEEVTIEGAAE 560 Query: 437 YASHRFSN-NRPVL 449 + + + + L Sbjct: 561 HVARLLRDLRKKHL 574 >gi|307326749|ref|ZP_07605941.1| threonyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113] gi|306887512|gb|EFN18506.1| threonyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113] Length = 659 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 71/447 (15%), Positives = 148/447 (33%), Gaps = 37/447 (8%) Query: 5 KYFLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L L + RD +L L + + G+ + P G + R+ + Sbjct: 247 KAYLDFLAEAEKRDHRKLGAELDLFS-FPDELGSGLAVFHPKGGVIRKEMEEYSRKRHDE 305 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 +G ++ P + A L+ SG Y M + + + + IFR+ + Sbjct: 306 SGYEFVNTPHITKARLFETSGHLPHYMDGMFPPMEFEGQDYYLKAMNCPMHNLIFRARGR 365 Query: 124 SYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ +R E G+ R+R F D++ + + + + + L Sbjct: 366 SYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDSHIYCTKEQMADEL-DNLLTFVL 424 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + GL + + D S +FI + + + Sbjct: 425 DLLRDYGLNDFYLELST----RDDSDKFIGGPEQ-----------WEEATEELRKAAEKQ 469 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + + D++ ++S ++ + Sbjct: 470 GLELVMDPGGAAFYGPKI---SVQARDAIGRTWQMSTIQVDFNQP--------ERFELEY 518 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 ADG + G++ AV+ + +P +AP + I I Sbjct: 519 TAADGSRQQPVMIHRALFGSIERFFAVLL---EHYAGAFPAWLAPVQAVGIPIGDGH--- 572 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+ A+ G + D +++ + A P VIVG + V+++ V ++R Sbjct: 573 VPYLEEFAAQAKAKGLRMEVDSSSDRMQKKIRNAQKSKIPFMVIVGDEDVTNNAVSFRYR 632 Query: 422 LTGIREDMSLEEVINYASHRFSNNRPV 448 + + ++E + + V Sbjct: 633 DGSQKNGIPIDEALAEIADAVERRIQV 659 >gi|254508639|ref|ZP_05120754.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus 16] gi|219548396|gb|EED25406.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus 16] Length = 571 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 112/237 (47%), Positives = 151/237 (63%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHTRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKEGLEKSYQAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 113/206 (54%), Gaps = 3/206 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPM 298 D I D+ N D + + RGIEVGHIF G YS M Sbjct: 366 DDKHYFGINWGRDVELGQVEDLRNVVEGDPSPCGKGTLMLKRGIEVGHIFQLGNTYSEAM 425 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 + G DGK+ ++MG YGIG RVVA+ IE +HD GIIWPD++APF+++++ + Sbjct: 426 NCGVLGPDGKNVILEMGCYGIGVSRVVASAIEQNHDKYGIIWPDALAPFQVAIVPMNMHK 485 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + ++A EK+YA L+ +G +V +DD E+ G F+ +L+G P +++G + + + E Sbjct: 486 SEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFSDMELIGIPHTIVIGDRSMKEGNFE 545 Query: 418 IKHRLTGIREDMSLEEVINYASHRFS 443 K+R +G + +++ +++ + + + Sbjct: 546 YKNRRSGEKTAVAMADIVEHVKAQLA 571 >gi|227501051|ref|ZP_03931100.1| threonine--tRNA ligase [Anaerococcus tetradius ATCC 35098] gi|227216824|gb|EEI82222.1| threonine--tRNA ligase [Anaerococcus tetradius ATCC 35098] Length = 667 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 145/442 (32%), Gaps = 42/442 (9%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + + +E RD ++ L H+ G + P G ++ + + N G Sbjct: 259 YEELQKEIEKRDHRKIGREMNLFA--FHEEGPGFPFFHPNGMILMNELLVWWTDVLNNNG 316 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW SG +D Y + M + +A P + + ++ SY Sbjct: 317 YGEIKTPLILNEALWHRSGHWDHYKENM-YFTKIDGEAYAVKPMNCPGSVLTYAANQHSY 375 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R EL G+ R R F DA+ + + + + Y + Sbjct: 376 RDLPIRLAEYGQVHRHELSGTLHGLFRVRTFTQDDAHVYCMPSQIKEEVYKM-IDLADLL 434 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K + P DF ++ Sbjct: 435 YSTFGFKYTI-ELSTRP-----------------DDFMGEIKDWDFAEDQLKKALEERGI 476 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I A Y D H L D+ + ++ F + T+ Sbjct: 477 EYEINPGDGAFYGPKIDFH---LLDAAKREWQCGTIQLD----FQLPQNFD----LTYID 525 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G+ + +G++ V+ G+ +W + I Sbjct: 526 ENGEKKRPAMLHRALLGSIERFIGVLTEHFAGRFPLW------LNPQQVEIIPVSDKYIP 579 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E++ ++ K G V D E +G + A L+ ++VG K + K+ +++R Sbjct: 580 YAEELKEKIKKAGYRVNIDYRSEGVGYKIRQAQLMRTNYMLVVGEKEENSGKLTVRNRDA 639 Query: 424 GIREDMSLEEVINYASHRFSNN 445 D+SLEE I + ++ Sbjct: 640 KETPDVSLEEFIEKLNEEKASK 661 >gi|190571398|ref|YP_001975756.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018797|ref|ZP_03334605.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|238055114|sp|B3CMJ4|SYT_WOLPP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|190357670|emb|CAQ55114.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995748|gb|EEB56388.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 633 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 82/442 (18%), Positives = 157/442 (35%), Gaps = 40/442 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L L+E RD + + L I + + G W G + + + IR++ Sbjct: 227 NTYLKRLEEAEKRDHRKIAKDMDLF--HIQEEAVGQIFWHEQGYTLYNVLESYIRKKLMN 284 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L S +LW +SG +D + + M + + K + P + IF SHI+ Sbjct: 285 NGYFEVKTPILVSKELWEKSGHWDKFRENMFIIDESESKKLAIKPMNCPCHVQIFNSHIR 344 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F DA+ F + + + + Sbjct: 345 SYRDLPIRMAEFGTCHRNESSGSLHGLMRVRGFTQDDAHIFCMEKQVNSETVKF-CDLLK 403 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ LG I ++ P + E D + + Sbjct: 404 EVYSELGFNEISVKFSDRPDTRSGNDE-----------------VWDRAERALLEAVKEA 446 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + L D++ N + ++ G A + Sbjct: 447 GLSYELNPGEGAFYGPKLEFI---LKDAIGRNWQCGTLQVDFILPERLG--------AFY 495 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DG H+ + +G ++ + +P +AP +++++ I Sbjct: 496 IGTDGHKHHPVMLHRAILGTFERFIGILI---ENYAGKFPVWLAPTQLAILTITNESDG- 551 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +I L + G + D E+I + + P+ I+G V++ V +++ Sbjct: 552 --YATEISNVLKEQGVRIKTDLTNEKISYKIRLHSSSKVPILWIIGKNEVTNKTVSVRNL 609 Query: 422 LTGIREDMSLEEVINYASHRFS 443 + +E SLE + Sbjct: 610 GSEKQESFSLENATELLLKIIN 631 >gi|91223451|ref|ZP_01258716.1| prolyl-tRNA synthetase [Vibrio alginolyticus 12G01] gi|269966231|ref|ZP_06180320.1| prolyl-tRNA synthetase [Vibrio alginolyticus 40B] gi|91191537|gb|EAS77801.1| prolyl-tRNA synthetase [Vibrio alginolyticus 12G01] gi|269829146|gb|EEZ83391.1| prolyl-tRNA synthetase [Vibrio alginolyticus 40B] Length = 571 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 112/236 (47%), Positives = 151/236 (63%), Gaps = 1/236 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHVRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMRSREF M DAYSFD+ +G + SY+ M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRSREFSMMDAYSFDIDKDGLQKSYDAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 Y + F R+GL P+ A+SG IGG S EF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLDYRPVLADSGAIGGSGSQEFHVLAESGE-DIIAFSSESDYAANIEK 235 Score = 172 bits (436), Expect = 9e-41, Method: Composition-based stats. Identities = 69/190 (36%), Positives = 111/190 (58%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N D P K + RGIEVGHIF G YS M+ G DGK+ ++M Sbjct: 382 GQVEDLRNVVEGDPSPCGKGIIQLKRGIEVGHIFQLGNAYSAAMNCGVLGPDGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVAA IE +HD GIIWPD++APF+++++ + + ++A EK+YA L+ Sbjct: 442 GCYGIGITRVVAAAIEQNHDKYGIIWPDAIAPFQVAIVPMNMHKSEEVKEAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G +V +DD E+ G F+ +L+G P +I+G + + + E K+R TG + +++ + Sbjct: 502 AMGIEVLFDDRKERPGVMFSDMELIGVPHTIIIGDRSMKEGNFEYKNRATGEKTAVAMTD 561 Query: 434 VINYASHRFS 443 ++ + + Sbjct: 562 IVEHVKAQLK 571 >gi|298368808|ref|ZP_06980126.1| proline--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314] gi|298282811|gb|EFI24298.1| proline--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314] Length = 569 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 122/273 (44%), Positives = 173/273 (63%), Gaps = 5/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL+ P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCRIFTRLGLEFRPVAADTGSIGGTDSHEFQVLAESGEDVIAYSDT-SDYAANVELAPTL 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + + + N K DSL + Sbjct: 240 PLKGERAAAQAEL----TKVHTPNVKTIDSLVD 268 Score = 159 bits (402), Expect = 9e-37, Method: Composition-based stats. Identities = 68/229 (29%), Positives = 106/229 (46%), Gaps = 7/229 (3%) Query: 222 FCSKDFMDFPIPSENTDFDDIISLNSIVEQW----TAPYAATSDVHNEKLFDSLPEN--K 275 F K + DF + + A D+ N D P+ + Sbjct: 341 FTGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEFVDLRNVVEGDESPDGQGR 400 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D Sbjct: 401 LKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDE 460 Query: 336 KGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KGIIW ++APF++ ++ + R+A +KIY L G DV DD E+ G Sbjct: 461 KGIIWTKAMAPFEVVIVPMNYKKSDAVREAADKIYTELLAAGADVLLDDRDERAGVLLND 520 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 ++LLG P ++++G + + + VE R + + +E+ Sbjct: 521 SELLGIPHRIVIGDRALKEGNVEYAERRDNEAQTVPTDEIAAKVLAALK 569 >gi|285019440|ref|YP_003377151.1| prolyl-tRNA synthetase [Xanthomonas albilineans GPE PC73] gi|283474658|emb|CBA17157.1| probable prolyl-trna synthetase protein [Xanthomonas albilineans] Length = 564 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 114/223 (51%), Positives = 148/223 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V ++REE Sbjct: 1 MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVETVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ PT+Q +LW +GR+ +G MLR+ DR ++ Y PT EE D R Sbjct: 61 MNRAGALEVVFPTIQPRELWDATGRWKKFGDLMLRIRDRKEQDYCYSPTAEEAAADFARH 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FYQIQ KFRDE+RPRFGVMR+REFLMKDAYSF L+ Y M + Sbjct: 121 ELNSYKQLPVNFYQIQSKFRDEIRPRFGVMRAREFLMKDAYSFHLSDTDLAREYENMKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC 223 Y RIF RLGL+ ++A+SG IGGD S EF VLAD+GE + Sbjct: 181 YHRIFTRLGLQFRAVQADSGDIGGDASQEFHVLADSGEDSLAF 223 Score = 136 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 1/167 (0%) Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 + ARGIEVGH+F G +Y+ + AT +GK + MG YGIG R+VAA IE +H Sbjct: 397 GEIRLARGIEVGHVFQLGRQYAQALDATVLDENGKTVAMAMGCYGIGISRIVAAAIEQNH 456 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDAC-EKIYARLSKVGCDVFWDDMGEQIGSQF 392 D GI WP +AP+ +++ I DA + + A L + G D DD G + G+ F Sbjct: 457 DAAGIRWPQPMAPWAVAICVINPKHDPAIDAAGDALLADLQQAGLDAILDDRGLRAGTMF 516 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 A +L+G P +V+V + ++ E + R G E ++ ++ Sbjct: 517 ADIELIGIPHRVVVSERGLAAGTFEYRARSGGDPESLNHTALLAKLR 563 >gi|170078264|ref|YP_001734902.1| prolyl-tRNA synthetase [Synechococcus sp. PCC 7002] gi|226701348|sp|B1XP53|SYP_SYNP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|169885933|gb|ACA99646.1| prolyl-tRNA synthetase [Synechococcus sp. PCC 7002] Length = 601 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 123/276 (44%), Positives = 167/276 (60%), Gaps = 7/276 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P DAEI SHKL+LR G I + +GIY++LPL + L V+ I+REE Sbjct: 1 MRLSQSLFVTLREDPADAEIPSHKLLLRAGYIRRIGRGIYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N TGA E +P LQ A++W ESGR+D+Y + M L DR D + GPTHEEV+T I Sbjct: 61 MNATGAQETLLPQLQPAEIWQESGRWDTYTQAEGIMFSLRDRLDGELGLGPTHEEVITTI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF + E K +Y M Sbjct: 121 AKDMIRSYRQLPQHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHASEECLKKTYADM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y + R GL+ + A+SG IGG S EF++LAD GE ++ ++D + +E Sbjct: 181 DQAYRNMLRRCGLQFRAVEADSGAIGGSGSQEFMILADAGEDEILYTED-EKYAANTEKA 239 Query: 238 ---DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 + I S + E+ P AT + + L S Sbjct: 240 VSLPVEAIASPFNSFEKRETPNTATIESLCKFLNCS 275 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 68/169 (40%), Positives = 98/169 (57%), Gaps = 1/169 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P +ARGIE GHIF GTKYS M ATF +GK+H + MG YG+G R+ A +E Sbjct: 427 PTQILQTARGIEAGHIFQLGTKYSEAMGATFTDENGKEHPLVMGCYGVGVSRLAQAAVEQ 486 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 S+D GIIWP ++AP+ ++ + A EK+YA L+ G + DD E+ G + Sbjct: 487 SYDENGIIWPVAIAPYHAVVVVPNVKSEEQMAAAEKLYADLNAAGVETILDDRNERAGVK 546 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 F A+L+G P +V+ G K + D KVE+ R G R+D+ L+ V+ + Sbjct: 547 FKDAELIGIPFRVVTG-KSLKDGKVEVVRRKEGDRQDLDLDAVVATLKN 594 >gi|114152276|sp|Q5E719|SYP_VIBF1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 571 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 114/237 (48%), Positives = 153/237 (64%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHQLMLRAGMIRRLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHVRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY+ M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDINKEGLQKSYDAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 62/190 (32%), Positives = 106/190 (55%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N D + RGIEVGHIF GT YS M+ A+GK+ ++M Sbjct: 382 GQVEDLRNVVEGDPSPCGKGTLQLKRGIEVGHIFQLGTAYSEAMNCGVLDANGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVA+ IE ++D GI+WP+++APF ++++ + + ++A EK+YA L+ Sbjct: 442 GCYGIGVSRVVASAIEQNNDEYGIVWPEAIAPFTVAIVPMNMHKSERVKEAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G +V +DD E+ G F +L+G P +++G + + + E K+R +E + + Sbjct: 502 AMGIEVLFDDRKERPGVMFKDIELIGIPHTIVIGDRSMDEGHFEYKNRRANTKEAVEMAN 561 Query: 434 VINYASHRFS 443 ++ + + S Sbjct: 562 IVEHIKAQLS 571 >gi|302541133|ref|ZP_07293475.1| threonine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653] gi|302458751|gb|EFL21844.1| threonine-tRNA ligase [Streptomyces himastatinicus ATCC 53653] Length = 659 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 70/447 (15%), Positives = 141/447 (31%), Gaps = 37/447 (8%) Query: 5 KYFLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L L + RD +L L + + G+ + P G + R+ Sbjct: 247 KAYLEFLAEAEKRDHRKLGAELDLFS-FPDELGSGLAVFHPRGGVIRKEMEDYSRKRHEE 305 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 +G ++ P + A L+ SG Y M + + + + IFR+ + Sbjct: 306 SGYEFVNSPHITKAKLFETSGHLPHYMDGMFPPMEFEGQDYYLKAMNCPMHNLIFRARGR 365 Query: 124 SYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ +R E G+ R+R F D++ + + + + + L Sbjct: 366 SYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDSHIYCTKEQMADEL-DNLLTFVL 424 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + GL + + E + + + Sbjct: 425 DLLRDYGLNDFYLELSTRDDSDKFMGE---------------PEQWEEATEELRKAAEKQ 469 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + + D++ ++S ++ F + + Sbjct: 470 GLELVMDPGGAAFYGPKI---SVQAKDAIGRTWQMSTIQVDFNQPARF--------NLEY 518 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 ADG + G++ AV+ + +P +AP + I I Sbjct: 519 TAADGSRQQPVMLHRALFGSIERFFAVLL---EHYAGAFPAWLAPVQAVGIPIGDGH--- 572 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+ A+ G V D +++ + A P VI G + V+ V ++R Sbjct: 573 VPYLEEFAAQARAKGLRVEVDSSSDRMQKKIRNAQRSKVPFMVIAGDEDVAAGAVSFRYR 632 Query: 422 LTGIREDMSLEEVINYASHRFSNNRPV 448 + + ++E I V Sbjct: 633 DGSQKNGIPIDEAIAEIIDVVERRVQV 659 >gi|73667547|ref|YP_303563.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Ehrlichia canis str. Jake] gi|123745825|sp|Q3YQP0|SYT_EHRCJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|72394688|gb|AAZ68965.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Ehrlichia canis str. Jake] Length = 633 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 82/438 (18%), Positives = 154/438 (35%), Gaps = 40/438 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 Y +++ RD +L L I + G W G + IR++ Sbjct: 228 LKSYLNNLIEIEKRDHRKIGKELELF--HIQNEACGQVFWHKKGWTIYRTIENYIRKKLE 285 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G IE+ P L + +LW +SG +D + + M L++ DK + P + IF S I Sbjct: 286 TNGYIEVKTPMLLNKELWEKSGHWDKFRENMF-LSEAEDKVLAIKPMNCPCHIQIFNSKI 344 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP + + R E G+MR R F DA+ F + + Sbjct: 345 RSYRDLPIRMAEFGICHRYEASGALHGLMRVRGFTQDDAHIFCTESQVISEALKF-CNLL 403 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ G +I ++ P S E D + + Sbjct: 404 MEVYKDFGFTNILVKFSDRPENRAGSDE-----------------TWDRAESALKKSVEA 446 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y + L D++ + ++ G A Sbjct: 447 ANLNYVLNPGDGAFYGPKLEF---VLKDAIGREWQCGTLQMDFVLPERLG--------AY 495 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G+DGK H+ + +G ++ H GK IW + ++I + Sbjct: 496 YVGSDGKKHHPIMLHRAILGTFERFIGILIEHHSGKFPIW------LAPTQLSILTISEE 549 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + + + + V D E+I + P+ IVG K V+++ V I++ Sbjct: 550 SIEYANSLKTKAEEHNIRVELDATNEKINYKIRNHIHKKIPVFWIVGKKEVNENSVSIRY 609 Query: 421 RLTGIREDMSLEEVINYA 438 + ++ M +++ + Sbjct: 610 LESNTQQVMPIDKALKTL 627 >gi|158335473|ref|YP_001516645.1| prolyl-tRNA synthetase [Acaryochloris marina MBIC11017] gi|189083486|sp|B0C230|SYP_ACAM1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|158305714|gb|ABW27331.1| prolyl-tRNA synthetase [Acaryochloris marina MBIC11017] Length = 600 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 115/240 (47%), Positives = 150/240 (62%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + GIY++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLREDPAEAEIPSHKLLLRAGYIRRVGSGIYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + GA E +P +Q A+LW ESGR+D+Y + M L DR D+ + GPTHEEV+T + Sbjct: 61 MDAAGAQECLLPQIQPAELWQESGRWDTYTQAEGIMFALQDRQDRELGLGPTHEEVITAV 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF K Y+KM Sbjct: 121 ARDMIRSYRQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFSTDEADLKIIYSKM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y I R GL + A+SG IGG S EF+VLA+ GE +V + D + E Sbjct: 181 HDAYCNILQRSGLAYRAVDADSGAIGGSGSQEFMVLAEAGEDEVLYTDDG-KYAANVEKA 239 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 60/173 (34%), Positives = 97/173 (56%), Gaps = 1/173 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P+ +ARGIE+GHIF GTKYS + AT+ GK+ + MG YG+G R+ A +E Sbjct: 425 PKQTLQTARGIEIGHIFQLGTKYSQALGATYTNEAGKEQPLVMGCYGVGVSRLAQAAVEQ 484 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 S+D GI+WP ++AP+ +I D +A EK+Y+ L+ G + DD E+ G + Sbjct: 485 SYDKDGIVWPVAIAPYHAIIIIPNGKDSDQVEAAEKLYSELNAAGIETLLDDRTERAGVK 544 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 F ADL+G P +++ G + + + VE+ R T ++L++V+ + Sbjct: 545 FKDADLIGIPYRIVTG-RSLKEGNVEMVERATHDAHQIALDQVLPTLKEYLAK 596 >gi|89897864|ref|YP_514974.1| threonyl-tRNA synthetase [Chlamydophila felis Fe/C-56] gi|123722330|sp|Q256F9|SYT_CHLFF RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|89331236|dbj|BAE80829.1| threoninyl tRNA synthetase [Chlamydophila felis Fe/C-56] Length = 635 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 72/445 (16%), Positives = 144/445 (32%), Gaps = 42/445 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++ + + RD + KL L + + S G+ + P G D + + Sbjct: 223 LKEHLHQLEEAKKRDHRVLGTKLDLFSQ--QECSAGMPFFHPRGMIIWDALIGYWKRLHQ 280 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P L + LW SG + +Y + M L +++ P + +++ + Sbjct: 281 LAGYKEILTPQLVNRSLWEVSGHWSNYKENMYTLK-IDEEDYAIKPMNCPGCMLYYKTRL 339 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY+ P +I R E+ G+MR R F DA+ LTPE + + Sbjct: 340 HSYKEFPLRIAEIGHVHRYEISGALSGLMRVRAFHQDDAH-VFLTPEQVEEETLNILNLV 398 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ GL+ + + P E S + D + + Sbjct: 399 SELYSTFGLEYH-LELSTRP----------------EKATIGSDELWDLATAALERALIN 441 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + I A Y D+H K R + G I Sbjct: 442 SNTPFVINPGDGAFYGPKIDIHV----------KDAIQRTWQCGTI-QLDMFLPERFELE 490 Query: 302 FKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + A G+ M + R + +IE + Sbjct: 491 YTNAQGEKSTPIMLHRALFGSIERFLGILIEHFKGRFPLWLSPEHVRLITVA-------D 543 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + +++ ++G V DD E + + A + V +G + + ++ + ++ Sbjct: 544 RHQPRAQELATAWQQLGFVVTVDDSNESVSKKIRNAQNMQVNYMVTLGDREIEENTLAVR 603 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 R + +M+++ IN ++ Sbjct: 604 TRDNRVLNNMTIDTFINTILEEKNS 628 >gi|103486185|ref|YP_615746.1| threonyl-tRNA synthetase [Sphingopyxis alaskensis RB2256] gi|123380057|sp|Q1GVA9|SYT_SPHAL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|98976262|gb|ABF52413.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Sphingopyxis alaskensis RB2256] Length = 667 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 80/452 (17%), Positives = 145/452 (32%), Gaps = 48/452 (10%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +++ + + + RD ++ L + Q + G W P G + A +R + Sbjct: 238 LAEHLVRLEEAAKRDHRRLGQEMDLF--HLQQEAHGSVFWHPNGFVVWRELEAYMRRAID 295 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK-------------AMIYGPT 109 G E+ P + A W +SG + Y + M + D M P Sbjct: 296 AAGYREVKTPQVMDARQWEQSGHWGKYRENMFVIPDEVPNTEDEGPIVSDDAEWMALKPM 355 Query: 110 HEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPE 168 + IFR +KSYR+LP Y+ R+E G+MR R+F DA+ F + Sbjct: 356 NCPAHVLIFRQGMKSYRDLPLRLYENGCCHRNEPHGALHGLMRVRQFTQDDAHIFCREDQ 415 Query: 169 GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFM 228 + ++ + R+ A + + + D E ++ + Sbjct: 416 IVEE-----VRNFCALADRIYKDFGFTYAIKLALRPEKRFGSDAMWDKSEDELRNAVIEA 470 Query: 229 DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIF 288 + A YA + H L D++ +V + Sbjct: 471 GLATEQYG---------WEELPGEGAFYAPKLEWH---LTDAIGRTWQVGTIQSDRVLPD 518 Query: 289 YFGTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 A++ G DG+ H + G+ ++ G+ W V Sbjct: 519 RLD--------ASYIGEDGERHRPVMLHRAIFGSYERFIGILIEHFVGRFPTWLAPVQAV 570 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 +++ D + ARL G D E+I + L P ++VG Sbjct: 571 VATIV------SDADDYAKAATARLVAAGIRTESDLRNEKINYKVREHSLAKVPHLLVVG 624 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 + + V I+ + M L E I Sbjct: 625 KREAEEGTVAIRTLGQDGQRIMPLAEAIAMLK 656 >gi|260889054|ref|ZP_05900317.1| proline--tRNA ligase [Leptotrichia hofstadii F0254] gi|260861114|gb|EEX75614.1| proline--tRNA ligase [Leptotrichia hofstadii F0254] Length = 570 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 128/279 (45%), Positives = 172/279 (61%), Gaps = 3/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK FL +E P++A+I SH+LMLR MI Q ++G+Y++LP G + L + I REE Sbjct: 1 MRLSKAFLKTYKEAPKEAQIVSHQLMLRAFMIKQLTRGVYTYLPFGYRVLKKIENITREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P LQ A LW ESGR+ +YG E++RL DRN++ GPTHEEV+TDI R Sbjct: 61 MDRAGAQELLMPVLQPASLWEESGRWFAYGPELMRLKDRNEREFSLGPTHEEVITDIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LPF YQIQ KFRDE+RPRFG+MR REF+MKD YSF LT E Y M + Sbjct: 121 SISSYKELPFNVYQIQTKFRDEMRPRFGLMRGREFVMKDGYSFHLTQESLDEEYLNMKDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--D 238 Y RIF R+GL + A++G IGGD+SHEF+VLA++GE + S D+ E Sbjct: 181 YSRIFERMGLNYRAVEADTGSIGGDVSHEFMVLAESGEDDILYSDS-SDYAANVEKATSI 239 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV 277 + S + + + F ++P+ K V Sbjct: 240 IELKESDEEKLPKELVETPNAKTIEELANFLNIPKEKTV 278 Score = 169 bits (428), Expect = 9e-40, Method: Composition-based stats. Identities = 74/202 (36%), Positives = 113/202 (55%), Gaps = 3/202 (1%) Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATF 302 V Y +D+ + D P+ K ARGIEVGHIF G KYS ++AT Sbjct: 370 HYVNVNIEDLAYDLAADIRTARAGDLSPDGKGILKIARGIEVGHIFKLGEKYSKALNATV 429 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 +GK ++MG YG+G R+++A IE +HD GIIWP ++AP+ +I D+ Sbjct: 430 LDENGKQAIMKMGCYGMGMSRIISAAIEQNHDEYGIIWPKAIAPYHADIIIANMKDETQV 489 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + EK+Y L++ + DD E+ G +F ADL+GFPL+++VG K +D VEIK R Sbjct: 490 NIGEKLYNELNQNKIEAVLDDRNERAGFKFKDADLIGFPLKIVVG-KGAADGIVEIKDRK 548 Query: 423 TGIREDMSLEEVINYASHRFSN 444 TG D+ +E+V+ + ++ + Sbjct: 549 TGESTDVKVEDVLKFVNNFMAE 570 >gi|88657649|ref|YP_506841.1| threonyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas] gi|123750088|sp|Q2GI92|SYT_EHRCR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|88599106|gb|ABD44575.1| threonyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas] Length = 633 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 84/437 (19%), Positives = 151/437 (34%), Gaps = 41/437 (9%) Query: 5 KYFLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L L + RD +L L I + G W G + IR++ Sbjct: 229 KLYLNNLIEAEKRDHRKIGRELELF--HIQNEACGQIFWHTKGWTIYRIIENYIRKKLEN 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G IE+ P L + +LW +SG +D + + M L++ DK + P + IF S I+ Sbjct: 287 NGYIEVKTPILLNKELWEKSGHWDKFRENMF-LSEAEDKTLAIKPMNCPCHIQIFNSKIR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R E G+MR R F DA+ F + + + + Sbjct: 346 SYRDLPIRMAEFGTCHRYEASGALHGLMRVRGFTQDDAHIFCTESQITSEALKFCNLLIE 405 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 I+ G I ++ P S E D + + Sbjct: 406 -IYKDFGFTDILVKFSDRPKNRAGSDE-----------------IWDKAEAALKKSVEVA 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + L D++ + ++ G A + Sbjct: 448 NLSYVLNPGDGAFYGPKLEF---TLKDAIGREWQCGTLQMDFVLPERLG--------AYY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G+DGK H+ + +G ++ H GK +W ++I + Sbjct: 497 IGSDGKKHHPVMLHRAILGTFERFIGILIEHHSGKFPMW------LAPIQLSILTISEDS 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + + + V D E+I + P+ IVG K V ++ V I++ Sbjct: 551 INYANSLKIKAEEHNIRVELDTTNEKINYKIRNHIHKKVPVFWIVGKKEVEENSVSIRYL 610 Query: 422 LTGIREDMSLEEVINYA 438 + + M +++ + Sbjct: 611 ESNKQHVMPIDKALKTL 627 >gi|316933337|ref|YP_004108319.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris DX-1] gi|315601051|gb|ADU43586.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris DX-1] Length = 693 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 75/443 (16%), Positives = 140/443 (31%), Gaps = 38/443 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + G+ W G ++ +R Sbjct: 263 YLHQIEEAEKRDHRKLGRELDLF--HFQEEGPGVVFWHAKGWSLFQSLVGYMRRRL-AGD 319 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-----KAMIYGPTHEEVMTDIFRS 120 E++ P + LW SG ++ Y + M + + P + IF+ Sbjct: 320 YDEVNAPQILDKVLWETSGHWEWYRENMFAAQSAGEDAEDKRWFALKPMNCPGHVQIFKH 379 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + + R E G+MR R F DA+ F + ++ + Sbjct: 380 GLKSYRDLPLRMAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEAQLAEECIKINDL 439 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + ++ + P + E A+ + + N Sbjct: 440 ILSTYSDFGFEGELTVKLSTRPDKRVGTDEMWDHAER-----VMATVLSEIKAKGGNRIK 494 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 +I A Y + L D++ + + ++ FG Sbjct: 495 TEI------NPGEGAFYGPKFEY---VLRDAIGRDWQCGTTQVDFNLPERFG-------- 537 Query: 300 ATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + ADG V + G+M ++ + G +W V ++ Sbjct: 538 AFYIDADGAKKAPVMVHRAICGSMERFTGILIEHYAGNFPLWLAPVQVVVTTIT------ 591 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + +K+ A L K G D E+I + L P ++VG K V + Sbjct: 592 SEGDEYAKKVLAALRKAGLRADIDLRNEKINFKVREHSLAKVPALLVVGKKEAETHSVSV 651 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + ++ M +E I Sbjct: 652 RRLGSDGQKVMPTDEAIAALVDE 674 >gi|325957298|ref|YP_004292710.1| threonyl-tRNA synthetase [Lactobacillus acidophilus 30SC] gi|325333863|gb|ADZ07771.1| threonyl-tRNA synthetase [Lactobacillus acidophilus 30SC] gi|327184028|gb|AEA32475.1| threonyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118] Length = 644 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 77/433 (17%), Positives = 153/433 (35%), Gaps = 34/433 (7%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L L + + G+ W+P G V I + + G + P L Sbjct: 239 RDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVL 296 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y +M D D M P + I++ HI+SYR+LP Sbjct: 297 MNLDAYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVA 356 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + K+ + ++ + Sbjct: 357 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQDE-FAKILKLIMDVYKDFDITD 415 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + F + + + DD+ E Sbjct: 416 YYFRLS-------------YRDPKNTEKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGE 462 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ T+ G DG++H Sbjct: 463 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----GLTYVGQDGEEHRP 511 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 M G + + I + +P +AP + +I + + + EK+ L Sbjct: 512 VMIHR--GIVGTMERFIAYLTEIYKGAFPTWLAPIQAEIIPVN--NDAHGEYAEKVRQEL 567 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 +K G D+ E++G + + P +++G + + + V ++ T SL+ Sbjct: 568 AKRGFRAEVDNRNEKMGYKIRESQTQKVPYTLVLGDEEMKNGSVNVRRYGTDEEISKSLD 627 Query: 433 EVINYASHRFSNN 445 + I + Sbjct: 628 DFIKEIDADVKSY 640 >gi|86357812|ref|YP_469704.1| threonyl-tRNA synthetase [Rhizobium etli CFN 42] gi|123765783|sp|Q2K859|SYT_RHIEC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|86281914|gb|ABC90977.1| threonyl-tRNA synthetase protein [Rhizobium etli CFN 42] Length = 668 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 74/447 (16%), Positives = 145/447 (32%), Gaps = 46/447 (10%) Query: 7 FLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L + RD ++ L + G+ W G + + A +R Sbjct: 234 YLHMLAEAEKRDHRKLGREMDLF--HFQEEGPGVVFWHGKGWRIFQTLVAYMRRRL-AID 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEML-----------RLADRNDKAMIYGPTHEEVM 114 E++ P + LW SG + Y + M + +++ P + Sbjct: 291 YEEVNAPQVLDTSLWETSGHWGWYQENMFGVKSAHAMTHPDDKEADNRVFALKPMNCPGH 350 Query: 115 TDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHS 173 IF+ +KSYR LP + L R E G+MR R F DA+ F + + Sbjct: 351 VQIFKHGLKSYRELPIRLAEFGLVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAEC 410 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 L ++ G K I ++ + P S A+ T V I Sbjct: 411 LKIN-DLILSVYEDFGFKEIVVKLSTRPEKRVGSDALWDRAEAVMTDVL-------KTIE 462 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 +++ L A Y + L D++ + ++ FG Sbjct: 463 AQSEGRIKTGIL----PGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG-- 513 Query: 294 YSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 A + ++ + + G+M ++ + G +W + ++ Sbjct: 514 ------AFYIDSNSEKTQPVMIHRAICGSMERFLGILIENFAGHMPLWVSPLQVVVATIT 567 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 ++ L + G +V D E+I + + P+ ++ G K Sbjct: 568 ------SEADAYGLEVAEALREAGLNVETDFRNEKINYKIREHSVTKVPVIIVCGRKEAE 621 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYAS 439 D V I+ + + M L+ + + Sbjct: 622 DRTVNIRRLGSQDQVSMGLDTAVESLA 648 >gi|229530020|ref|ZP_04419410.1| prolyl-tRNA synthetase [Vibrio cholerae 12129(1)] gi|229333794|gb|EEN99280.1| prolyl-tRNA synthetase [Vibrio cholerae 12129(1)] Length = 571 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 115/237 (48%), Positives = 153/237 (64%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFQLWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ G + SY M V+ Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYEAMHVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL P+ A++G IGG+ SHEF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 68/190 (35%), Positives = 111/190 (58%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N D + + RGIEVGHIF GT YS M+ ++GK+ ++M Sbjct: 382 GKVEDLRNVVEGDPSPCGKGTLMLKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVAA IE +HD GIIWPD++APF+++++ + + + A EK+YA L+ Sbjct: 442 GCYGIGVSRVVAAAIEQNHDDYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G +V +DD E+ G F+ +L+G P +I+G + + + E K+R G +E +++E Sbjct: 502 AAGIEVLFDDRKERPGVMFSDMELIGVPHTIIIGDRSMDEGHFEYKNRRQGEKEAVAMES 561 Query: 434 VINYASHRFS 443 +I++ + + Sbjct: 562 IIDFIQAKLA 571 >gi|315503148|ref|YP_004082035.1| threonyl-tRNA synthetase [Micromonospora sp. L5] gi|315409767|gb|ADU07884.1| threonyl-tRNA synthetase [Micromonospora sp. L5] Length = 671 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 68/444 (15%), Positives = 132/444 (29%), Gaps = 35/444 (7%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E R D L L + + G+ + P G + +R Sbjct: 250 KAYLKLLEEAARRDHRKLGADLDLFS-FPDEIGSGLPVFHPKGGVLKRVMEDYVRARHVE 308 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + L+ SG Y M + + + I+RS + Sbjct: 309 EGFDYVGTPHISKEGLFHTSGHLPYYKDTMFPPMEMEGSDYYLKAMNCPMHNLIYRSRGR 368 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ +R E G+ R R F D++S+ + + L Sbjct: 369 SYRQLPIRLFEFGTVYRYEKSGVIHGLTRVRGFTQDDSHSYCTREQAPSE-IKHLLGFVL 427 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + G+ + + ++ + S + + Sbjct: 428 SLLRDFGIDDFYLELSTRD-------------ESKPDKFVGSDEDWATATAVLEQCALET 474 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + + D++ ++S + FG + Sbjct: 475 GLELVPDPGGAAFYGPKI---SVQAKDAIGRTWQMSTIQYDFNQPKGFG--------LEY 523 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + ADG + G++ V+ + G W V I + Sbjct: 524 QAADGTRQQPVMIHCAKFGSIERFIGVLTEHYAGAFPAWLAPVQVVGIPI------RDEH 577 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D A L + G D +++ + A P VI G V+ V ++R Sbjct: 578 GDYLVDFAATLRRHGVRAEVDLGDDRMQKKIRNAQQQKIPFMVIAGDDDVAAGTVSFRYR 637 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 R + ++E + + + Sbjct: 638 DGSQRNGVPVDEAVAHVREVVESR 661 >gi|260575744|ref|ZP_05843741.1| threonyl-tRNA synthetase [Rhodobacter sp. SW2] gi|259022142|gb|EEW25441.1| threonyl-tRNA synthetase [Rhodobacter sp. SW2] Length = 648 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 79/445 (17%), Positives = 148/445 (33%), Gaps = 45/445 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD ++ L + + + G+ W P G + + +R Q Sbjct: 234 KAHLTMLEEAAKRDHRRLGKEMDLF--HLQEEAPGMVFWHPNGWQVWRTLEDYMRRRQRE 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G E+ P + LW SG +++Y + M + + + P + ++ Sbjct: 292 AGYREIRTPQVVDRVLWERSGHWEAYRENMFIVEVDEEGAKEKRINALKPMNCPCHVQVY 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F DA+ F T + Sbjct: 352 NQGLKSYRDLPLRLAEFGACHRYESSGSMHGLMRVRGFTQDDAHIFC-TEAQIESECAAF 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 ++H LG +S ++ + P + E +T + Sbjct: 411 IELLSSVYHDLGFESFDIKLSTRPEVRIGTDEDWDRVET-----------------ALEN 453 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + I A Y D KL D++ + ++ G Sbjct: 454 AIKKVGRSYVIDPGEGAFYGPKLDF---KLTDAIGRQWQCGTFQVDPNLPSRLG------ 504 Query: 298 MSATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + G DG H + +G+ ++ ++ GK W ++ Sbjct: 505 --AEYIGEDGARHRPFMLHRAILGSFERFLGILIENYAGKLPFWLAPRQVVVAGIV---- 558 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 ++ A L K G D E+I + + P+ + +G K V + V Sbjct: 559 --SDADAYVHEVVAELRKAGVRAEADVRNEKINYKVREHSVGKVPVILAIGMKEVEERSV 616 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + SL ++ +H Sbjct: 617 SVRRLGETRTDSESLTGIVATLAHE 641 >gi|218295928|ref|ZP_03496708.1| threonyl-tRNA synthetase [Thermus aquaticus Y51MC23] gi|218243666|gb|EED10194.1| threonyl-tRNA synthetase [Thermus aquaticus Y51MC23] Length = 660 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 85/451 (18%), Positives = 156/451 (34%), Gaps = 41/451 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQ 61 +Y + + RD +L L +I KG+ WLP G + + A +REEQ Sbjct: 238 LKEYLWQLEEAKKRDHRRLGRELELF--LIDPMVGKGLVLWLPKGNVIREELIAFMREEQ 295 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK----AMIYGPTHEEVMTDI 117 + G ++ P + S +L+ SG Y Y + ++ + P + I Sbjct: 296 IKRGYQLVTTPHIGSLELYKTSGHYPYYAESQFPPISFKERGEEEEYLLKPMNCPHHIRI 355 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 + +SYR LP + +R E G+ R R F DA+ F + + Sbjct: 356 YAHKKRSYRELPLRLAEFGTVYRYEKAGELLGLTRVRGFTQDDAHIFCAPEDVKGE-FLG 414 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + L++F LGLK R + D + + Sbjct: 415 VLDLVLKVFATLGLKDFRARIGTR--------------DPKSDKYVGDEARWSLAERQIE 460 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + ++ E A Y D + D+L ++ ++ FG Sbjct: 461 EAALEAGLHYTVEEGDAAFYGPKLDF---VVKDALGREWQLGTIQVDYNLPERFG----- 512 Query: 297 PMSATFKGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 T+ G DG++H + G++ ++ G +W V + + Sbjct: 513 ---LTYVGKDGEEHRPVVLHRAPFGSLERFIGILIEHFAGDFPLWLSPVQVVVVPV---- 565 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + D ++ RL + G D E++ ++ A+L P ++VG K ++ Sbjct: 566 --SEKQEDYALEVTHRLKEAGLRAEADTRPERMQARIRDAELKKVPYVLVVGEKEKAEGA 623 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 V ++ R G M L + A + R Sbjct: 624 VSVRRRHRGNLGVMPLFTFVEGALREYRERR 654 >gi|297620271|ref|YP_003708408.1| Threonyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044] gi|297375572|gb|ADI37402.1| Threonyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044] Length = 642 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 75/444 (16%), Positives = 144/444 (32%), Gaps = 38/444 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y + + RD + KL L + + + G+ P G + +RE Sbjct: 225 LKEYLHQMEEAKKRDHRVIGSKLDLFS--FKEEAAGMPFIHPKGMTVWTELTNYLRECLG 282 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 +E+ P + S LW SG + +Y + M ++ D P + ++SH+ Sbjct: 283 SANYVEIKTPIMLSRGLWETSGHWFNYRENMFT-SEIEDHDYAIKPMNCPGCMLYYKSHV 341 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR LP +I R E G+ R R F DA+ F P + + + Sbjct: 342 HSYRELPLRVAEIGNVHRYEPSGALSGLFRVRSFHQDDAHIFMK-PSDIEGEILSLLNLF 400 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +++ GL + + P E + + + D Sbjct: 401 EKLYSTFGLSYH-LELSTRP----------------EKGTIGTDEEWEQATAGLKNALDK 443 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D H + D++ + +++ +++L +A+ Sbjct: 444 WGHDYKINEGDGAFYGPKIDFH---IRDAINRTWQCGTIQLDMA----LPQRFALEYTAS 496 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + V + G++ ++ GK +W I Sbjct: 497 ---DGERHRPVMLHRAIFGSIERFMGILIEHFAGKFPLW------ISPLQARILTVADRH 547 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 ++ +L + G V D GE + + A L + VG K + + ++ R Sbjct: 548 EPYAHELMQKLKQQGFRVDIDATGESVSKKVRTAQLTQINYILTVGDKEMEHKTLNLRTR 607 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + ++ LE I Sbjct: 608 DNVVHGEIDLEAFIIALKKEKEER 631 >gi|329118470|ref|ZP_08247175.1| proline--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200] gi|327465411|gb|EGF11691.1| proline--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200] Length = 571 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 118/252 (46%), Positives = 165/252 (65%), Gaps = 2/252 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASRFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVERVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+++ GPT EEV+TDI R Sbjct: 61 MERAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHERDFCMGPTCEEVITDIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLT-PEGSKHSYNKMFV 179 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + Y M+ Sbjct: 121 EITSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYESLVRDGYQPMYD 180 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 +Y RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 AYCRIFDRLGLNYRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSD-ASDYAANIELAQT 239 Query: 240 DDIISLNSIVEQ 251 + E+ Sbjct: 240 LRLQGERRPSEK 251 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 104/196 (53%), Gaps = 3/196 (1%) Query: 251 QWTAPYAATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A +D+ N D + ARGIEVGH+F KYS M+A F ++GK Sbjct: 375 GRDAAEPEFADLRNVVEGDPSPCGKGSLKLARGIEVGHVFQLRDKYSAAMNAAFLDSNGK 434 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 ++MG YGIG R+VAA IE ++DG+GIIW D++APF+ ++ + R+A +K Sbjct: 435 SQIMEMGCYGIGITRIVAAAIEQNNDGRGIIWTDAMAPFQAVIVPMNYKKSDAVREAADK 494 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 IYA L G DV DD E+ G A ++LLG P ++++G + + + KVE R + Sbjct: 495 IYAELCAAGADVLLDDRDERAGVLLADSELLGIPHRIVIGDRGLKEGKVEYARRTDSEAQ 554 Query: 428 DMSLEEVINYASHRFS 443 +++EE Sbjct: 555 SVAVEEAAAKVLAALR 570 >gi|227824508|ref|ZP_03989340.1| prolyl-tRNA synthetase [Acidaminococcus sp. D21] gi|226905007|gb|EEH90925.1| prolyl-tRNA synthetase [Acidaminococcus sp. D21] Length = 571 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 126/371 (33%), Positives = 188/371 (50%), Gaps = 8/371 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK + P L+E P +A + SHKLMLR G I + + G+Y++LPL K++ + IIREE Sbjct: 1 MLVSKLYAPTLREVPAEAVLESHKLMLRAGYIRKIAGGLYTYLPLAWKSIKKIERIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + + E+ +P +Q +++W ESGR+D YG EM R+ DR+ + GPTHEE++T + ++ Sbjct: 61 MDAIDSQEIMMPIVQPSEIWKESGRWDVYGAEMFRVRDRHGREFCLGPTHEEMITTLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP + YQIQ KFRDE RPRFG+MRSREF+MKDAY+FD G SY KM+ + Sbjct: 121 ELHSYRQLPTSLYQIQSKFRDEKRPRFGLMRSREFIMKDAYTFDADEAGLDESYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GL P+ A+ G IGG+ SHEF+ +A +GE + D+ E + + Sbjct: 181 YARIFDRCGLNYRPVEADPGAIGGNGSHEFMGIAASGEAGIVYCDTC-DYAADVEKAECE 239 Query: 241 DIISLNSIVEQW---TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS-L 296 + S + P T + E L + ++ + A + G + + Sbjct: 240 ALPSQEEAPRELHTIGTPGCNTIEAVCEYLHAPIEKSVKAVALTSDKGGLILCFVRGDHE 299 Query: 297 PMSATFKGADGKDHYVQMG---SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 A G + + G + I + I+ +V Sbjct: 300 VNEIKVTNAVGANEVMMASDEQIRAAGTVPGFMGPIGLDLNKCTILIDATVMNMHNVCCG 359 Query: 354 IKAHDQVCRDA 364 D DA Sbjct: 360 ANEVDTHYVDA 370 Score = 165 bits (417), Expect = 2e-38, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 107/210 (50%), Gaps = 4/210 (1%) Query: 239 FDDIISLNSIVEQWTAP-YAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYS 295 +++ + E Y D+ D P K ARGIEVG +F TKYS Sbjct: 360 ANEVDTHYVDAEPCRDFVYTKVLDIRTAHEGDQCPHCKGHLKEARGIEVGQVFKLYTKYS 419 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 + ATF +GK+ MGSYGIG R +AAVIE HD G I P ++AP+++ ++ + Sbjct: 420 EALHATFLDPEGKEKPFYMGSYGIGVGRTLAAVIEQYHDANGAIMPKNIAPYEVIVLPVN 479 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 D+ +IY L+ G D DD E+ G +F ADL+G+P++V+VG K + Sbjct: 480 VKDEESFAKAGEIYQALNAQGIDAILDDRDERAGVKFKDADLIGYPVRVVVGPKTLQRGA 539 Query: 416 VEIKHRLTGIREDMSLE-EVINYASHRFSN 444 +E+K R TG D+ L+ + ++ S Sbjct: 540 MEVKVRYTGEMCDLPLDGDYVSALKDILSK 569 >gi|149185120|ref|ZP_01863437.1| threonyl-tRNA synthetase [Erythrobacter sp. SD-21] gi|148831231|gb|EDL49665.1| threonyl-tRNA synthetase [Erythrobacter sp. SD-21] Length = 671 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 76/455 (16%), Positives = 143/455 (31%), Gaps = 53/455 (11%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD ++ L + + + G W P G + + A +R + + G Sbjct: 242 LTRLEEAAKRDHRKLGREMDLF--HLQEEAHGSVFWHPNGYRIWRELEAYMRRKMDGAGY 299 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADR------------------NDKAMIYGP 108 E+ P L W SG + Y + M + D + M P Sbjct: 300 REIKTPQLMDVRQWTASGHWGKYAENMFAVPDIVPDVDDSGAASAHPKVADDADWMAIKP 359 Query: 109 THEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTP 167 + +F+ I SYR+LP ++ R+E G+MR R+F DA+ F + Sbjct: 360 MNCPAHVLVFKQGITSYRDLPIRLGEMGCCHRNEPHGALHGLMRVRQFTQDDAHIFC-SE 418 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 ++ G + P S A+ Sbjct: 419 SQVVEEVRAFCKLAESVYKDFGFTFAI-KLALRPEKRLGSDADWDKAEQELRDAVEEAGM 477 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 M+ E + A YA + H L D++ +V + Sbjct: 478 MNEEFGWEE------------LPGEGAFYAPKLEWH---LTDAIGRTWQVGTIQGDRVLP 522 Query: 288 FYFGTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAP 346 + A++ G DG+ H + G+ ++ + G+ +W Sbjct: 523 --------ERLDASYVGEDGEKHRPVMLHRAIFGSYERFIGILIEHYAGRMPVWLAPTQA 574 Query: 347 FKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIV 406 +++ D ++ A+L G V D E+I + P ++V Sbjct: 575 VVATIV------SDADDYAKEAVAKLEAAGIRVASDLRNEKINYKVREHSHAKVPHLLVV 628 Query: 407 GSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 G++ + V ++ ++ M LEE I Sbjct: 629 GNREAEEGTVAVRTLGQQHQKVMPLEEAIAMLKAE 663 >gi|114328278|ref|YP_745435.1| threonyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1] gi|122326764|sp|Q0BRP0|SYT_GRABC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|114316452|gb|ABI62512.1| threonyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1] Length = 642 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 75/440 (17%), Positives = 148/440 (33%), Gaps = 42/440 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E R D ++ L I + + G W G + + +R Q G Sbjct: 232 YLHQLEEAERRDHRRLGKEMDLF--HIQEEAVGSIFWHKKGWRLYRALENYMRRRQIEAG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P L LW +SG +D Y + M + +K + P + IFR ++S Sbjct: 290 YEEVRTPQLVDRSLWEDSGHWDKYREHMFIATVEDEEKTLALKPMNCPCHVQIFRHGLRS 349 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 Y+ LP + R E G+MR R F DA+ F + + +K + Sbjct: 350 YKELPLRMAEFGACHRYEPSGALHGIMRVRSFTQDDAHIFCMPEQIAKET-ADFVAMLAS 408 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ LG S ++ P E D Sbjct: 409 VYRDLGFDSFRVKFADRPESRAGKDE-----------------DWDRAEHELREACRLAG 451 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y + L D++ + + ++ ++A + Sbjct: 452 VEYELNPGEGAFYGPKLEF---VLRDAIGRDWQCGTLQVDYVLP--------ERLNAEYV 500 Query: 304 GADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG + V + +G+ ++ + G+ +W V ++ Sbjct: 501 AEDGARRRPVMLHRAILGSFERFIGILIEQYAGRFPLWLAPVPVVVAPIV------SDAN 554 Query: 363 DACEKIYARLSKVGCD-VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 ++ L + G D E+I ++ L P+ ++VG + +V ++ Sbjct: 555 AYAMEVVTALKRAGVTWAEADLRNEKINAKIREHSLAHVPVILVVGRREAEQRQVALRRL 614 Query: 422 LTGIREDMSLEEVINYASHR 441 + ++ M+L+E I+ + Sbjct: 615 GSQEQQVMALDEAISALATE 634 >gi|291295577|ref|YP_003506975.1| threonyl-tRNA synthetase [Meiothermus ruber DSM 1279] gi|290470536|gb|ADD27955.1| threonyl-tRNA synthetase [Meiothermus ruber DSM 1279] Length = 652 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 72/443 (16%), Positives = 146/443 (32%), Gaps = 33/443 (7%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + RD L L T + + KG+ WLP G + + +++ G Sbjct: 241 YLWQQEEAKRRDHRRLGQALELFT-ISEEVGKGLPLWLPRGAFIRRQMEDYMYQKEQEHG 299 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +A L+ SG Y +M + + P + I+++ KSY Sbjct: 300 YHYVYTPHIANARLYYTSGHLPYYKDDMYAPIEIEGEEYYLKPMNCPHHHMIYKARPKSY 359 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + +R EL G+ R+R F DA+ + + ++ + ++ + + Sbjct: 360 RDLPLRLAEFGTVYRFELSGTLSGLTRARGFTQNDAHIYCSRAQVTEE-FIRVIQLFDEV 418 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G+ R + + D I + ++ + Sbjct: 419 YKDFGISDYWFRLSLPDF------------ENNPEKFGEENDNWRDSIKAIRAALEETGA 466 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 Y DV + L + + ++ ++ FG F Sbjct: 467 KYVEGIGEATFYGPKLDVQIRSV---LGKEETIATNQLDFIVPERFG--------LEFTN 515 Query: 305 ADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 G+ + +G+ A G +W I + Sbjct: 516 EKGEKETPVVIHRAIMGSFDRFFAFYLEHTAGDFPLW------LSPIQAVIVPIADRHLE 569 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +K+ A + K V DD E++ ++ A+L PL ++VG K V ++ R Sbjct: 570 YAQKVAAEMRKNRLRVEIDDRSERMNAKIRDAELQKIPLILVVGDKEAEAGTVNVRERHV 629 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 + +++ +I R + Sbjct: 630 KEQRTLAVAALIEEMKARVEARK 652 >gi|323498007|ref|ZP_08103016.1| prolyl-tRNA synthetase [Vibrio sinaloensis DSM 21326] gi|323317052|gb|EGA70054.1| prolyl-tRNA synthetase [Vibrio sinaloensis DSM 21326] Length = 571 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 111/237 (46%), Positives = 152/237 (64%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHTRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ +G + SY+ M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKDGLQKSYDAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAF-STESDYAANIEKA 236 Score = 171 bits (434), Expect = 2e-40, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 112/205 (54%), Gaps = 3/205 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPM 298 D I D+ N D P + RGIEVGHIF G YS M Sbjct: 366 DDKHYFGINWGRDVELGQIEDLRNVVEGDPSPCGQGTIMLKRGIEVGHIFQLGKAYSEAM 425 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 + G DGK+ ++MG YGIG RVVA+ IE +HD GIIWPD++APF+++++ + Sbjct: 426 NCGVLGPDGKNVILEMGCYGIGVSRVVASAIEQNHDKYGIIWPDALAPFQVAIVPMNMHK 485 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + ++A EK+YA L+ +G +V +DD E+ G F+ +L+G P +++G + + + E Sbjct: 486 SEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFSDMELIGIPHTIVIGDRSMKEGNFE 545 Query: 418 IKHRLTGIREDMSLEEVINYASHRF 442 K+R +G + +++ +++ + + Sbjct: 546 YKNRRSGEKTAVAMTDIVEHVKAQL 570 >gi|320593705|gb|EFX06114.1| prolyl-tRNA synthetase [Grosmannia clavigera kw1407] Length = 495 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 144/473 (30%), Positives = 226/473 (47%), Gaps = 55/473 (11%) Query: 2 RRSKYFLP----ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAII 57 R +++++P L++ ++ E SH ++R G Q G++ LPLG + D + A++ Sbjct: 45 RLTQFWVPPPQVALKDAKQNEE--SHAKLVRAGFFRQAHSGVFHMLPLGLRVQDKIEALV 102 Query: 58 REEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDI 117 + GA +++ ++ SA LW SGR S E+ + DR + PTHEE +T++ Sbjct: 103 DKHMRSIGASRVALSSITSAGLWERSGRLGSVKPELFQFEDRKQAKFLLAPTHEEEITEL 162 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + SYR+LP YQI K+RDE+RPR+G++RSREF+MKD Y+FD T E + +Y ++ Sbjct: 163 VAQSVHSYRDLPLRLYQITRKYRDEMRPRYGILRSREFIMKDLYTFDTTVEAALATYEQV 222 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y IF L + RA SG +GGDLSHE+ + A GE V + F +E T Sbjct: 223 RAAYAAIFAELRVPVRVARASSGDMGGDLSHEYHLAASLGEDDVASCRAC-GFAGNTEIT 281 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK----RVSARGIEVGHIFYFGTK 293 D + D P+ R IE+GH FY GT+ Sbjct: 282 HIG-------------------PDSRPARSGDDCPDCGAAGSLQVERAIELGHTFYLGTR 322 Query: 294 YSLPMSATFKGADGKD----HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 YS P++ +G MG YGIG R++ AV + D G+ WP ++APF+ Sbjct: 323 YSEPLNVRVQGDQNTPATSTITPLMGCYGIGISRILGAVADHLADPTGLRWPRAIAPFE- 381 Query: 350 SLINIKAHDQVCRDACEKIYARLSKV---GCDVFWDDMG-EQIGSQFAVADLLGFPLQVI 405 + + A E++Y L+ D DD + + ADL G+P+ VI Sbjct: 382 -VAVVAAGGSPLAQVAERVYDELTANTETRLDALLDDRPAASLPYKLKDADLTGYPVVVI 440 Query: 406 VG---SKFVS------------DSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 VG + + D E++ R G+R+D+ L E+ + S + Sbjct: 441 VGAAWRRSTATATDSSAPNISLDGLCEVQCRQLGLRQDVPLSELKTFVSGLLA 493 >gi|260775255|ref|ZP_05884152.1| prolyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450] gi|260608436|gb|EEX34601.1| prolyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450] Length = 571 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 112/236 (47%), Positives = 152/236 (64%), Gaps = 1/236 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHTRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY+ M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKEGLQKSYDAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAF-STESDYAANIEK 235 Score = 171 bits (434), Expect = 2e-40, Method: Composition-based stats. Identities = 67/190 (35%), Positives = 112/190 (58%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 + D+ N D P K RGIEVGHIF G YS M+ G DGK+ ++M Sbjct: 382 SQVEDLRNVVEGDPSPCGKGTIALKRGIEVGHIFQLGNVYSQAMNCGVLGPDGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVA+ IE +HD GIIWPD++APF+++++ + + ++A EK+YA L+ Sbjct: 442 GCYGIGVSRVVASAIEQNHDKYGIIWPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G +V +DD E+ G F+ +L+G P +++G + + + E K+R TG + +++ + Sbjct: 502 AMGIEVLFDDRKERPGVMFSDMELIGIPHTIVIGDRSMKEGNFEYKNRRTGDKTPVAMAD 561 Query: 434 VINYASHRFS 443 ++ + + + Sbjct: 562 IVEHIKAQLA 571 >gi|255030222|ref|ZP_05302173.1| prolyl-tRNA synthetase [Listeria monocytogenes LO28] Length = 505 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 123/294 (41%), Positives = 166/294 (56%), Gaps = 5/294 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E YN M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--- 237 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D+ +E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYSD-ASDYAANTEMAPVL 239 Query: 238 -DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 L +E+ P + L + + + ++ I Sbjct: 240 YMEKKSHELEKDLEKVATPDQKSITDIVGFLEVPIEKTMKSMLYQVDDEVIMVL 293 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 2/123 (1%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ ++ D P+ + V GIEVGHIF GTKYS M+AT +G+ + MG YG Sbjct: 383 DLRMIQVGDLSPDGQGVIKFAEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R+++A+ E S+D G +W ++PF + LI + + E +Y L G Sbjct: 443 IGVSRILSAIAEQSNDENGFVWDKQISPFDLHLIPVNMKSEEQVAFAETLYTSLQDAGFS 502 Query: 379 VFW 381 V Sbjct: 503 VLI 505 >gi|257064333|ref|YP_003144005.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Slackia heliotrinireducens DSM 20476] gi|256791986|gb|ACV22656.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Slackia heliotrinireducens DSM 20476] Length = 586 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 75/438 (17%), Positives = 137/438 (31%), Gaps = 41/438 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD ++ L M G WLP G K + + + + E+ Sbjct: 188 EEAKKRDHRKIGQEMELF--MFADEGPGFPFWLPNGTKLKNALIEYWHDMMAKYNYDEVE 245 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + S LW SG +D Y + M +++ P + I++S +SYR+LP Sbjct: 246 TPQILSRKLWETSGHWDHYKENMYT-TVIDEEDYAVKPMNCPGACLIYKSRPRSYRDLPL 304 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + L R EL+ G+ R R F D + + + S +++ Sbjct: 305 KLAEAGLDHRHELKGALHGLFRVRAFTQDDGHIYVTPEQISDIVLETAR--LFDEYYQQF 362 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + P S E + + + + Sbjct: 363 GFEYKVELSTRPEDSMGSDE-----------------DWERAENGLREALEKMGKDYILN 405 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 E A Y D H L D L + ++ F + L A K Sbjct: 406 EGDGAFYGPKIDFH---LKDCLGRTWQCGTIQLD----FQLPQNFELEYMAA---DGTKK 455 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + + G G+ ++ + GK W + + + + RD ++ Sbjct: 456 RPIMIHRAGFGSFERFIGMLTEQYAGKFPTWLAPLQVKILPV------SEKTRDYALEVG 509 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVA-DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 L G D E+IG + A P +I+G + + ++ R + Sbjct: 510 QVLRDAGVRAVVDTRDEKIGYKIREARSTDRVPYMLILGEQERDGKYISVRDR-SNETVA 568 Query: 429 MSLEEVINYASHRFSNNR 446 L+E I + + R Sbjct: 569 RQLDEFIADITAEIAERR 586 >gi|224539835|ref|ZP_03680374.1| hypothetical protein BACCELL_04745 [Bacteroides cellulosilyticus DSM 14838] gi|224518545|gb|EEF87650.1| hypothetical protein BACCELL_04745 [Bacteroides cellulosilyticus DSM 14838] Length = 519 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 74/446 (16%), Positives = 145/446 (32%), Gaps = 40/446 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD ++ L KG+ WLP G + +R Q R Sbjct: 103 EYLAMLEEAKKRDHRKIGKEMDLFM-FSDTVGKGLPMWLPKGTALRLRLQEFLRRIQARY 161 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + L++ SG Y YGK+ + + P + I+++ Sbjct: 162 DYQEVITPPIGNKLLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSP 221 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F + + ++ Sbjct: 222 RSYKDLPLRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDE-FLRVMDII 280 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + ++ + D + + D + + Sbjct: 281 SIVFRSMDFANVEAQISLR--------------DKVNREKYIGSDENWERAEQSIIEACE 326 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L++ +E A Y D + D++ ++ ++ Sbjct: 327 EKGLSARIEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFEL 375 Query: 301 TFKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + GAD + H M R VA +IE + + Sbjct: 376 EYTGADNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLWLTPEQVAILPI-------S 428 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + D +++ L + D+ E+IG + +L P +IVG K + +V + Sbjct: 429 EKFNDYAQEVKKFLKQYDIRAIVDERNEKIGRKIRDNELKRIPYMLIVGEKEAENREVSV 488 Query: 419 KHRLTGIREDMSLEEVINYASHRFSN 444 + + G + M EE + N Sbjct: 489 RKQGEGDKGTMKFEEFAKILNEEVQN 514 >gi|172087674|ref|YP_204065.3| prolyl-tRNA synthetase [Vibrio fischeri ES114] gi|59479390|gb|AAW85177.1| prolyl-tRNA synthetase [Vibrio fischeri ES114] Length = 575 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 114/237 (48%), Positives = 153/237 (64%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 5 MRTSKYLLSTLKETPNDAEVVSHQLMLRAGMIRRLASGLYTWLPTGLRVLRKVENIVRQE 64 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 65 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHVRPFVLSPTAEEVITSLVRN 124 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY+ M + Sbjct: 125 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDINKEGLQKSYDAMHDA 184 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y + F R+GL+ P+ A+SG IGG S EF VLA++GE + D+ E Sbjct: 185 YCKAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIAF-STESDYAANIEKA 240 Score = 166 bits (421), Expect = 6e-39, Method: Composition-based stats. Identities = 62/190 (32%), Positives = 106/190 (55%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N D + RGIEVGHIF GT YS M+ A+GK+ ++M Sbjct: 386 GQVEDLRNVVEGDPSPCGKGTLQLKRGIEVGHIFQLGTAYSEAMNCGVLDANGKNVILEM 445 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVA+ IE ++D GI+WP+++APF ++++ + + ++A EK+YA L+ Sbjct: 446 GCYGIGVSRVVASAIEQNNDEYGIVWPEAIAPFTVAIVPMNMHKSERVKEAAEKLYAELT 505 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G +V +DD E+ G F +L+G P +++G + + + E K+R +E + + Sbjct: 506 AMGIEVLFDDRKERPGVMFKDIELIGIPHTIVIGDRSMDEGHFEYKNRRANTKEAVEMAN 565 Query: 434 VINYASHRFS 443 ++ + + S Sbjct: 566 IVEHIKAQLS 575 >gi|254229498|ref|ZP_04922912.1| prolyl-tRNA synthetase [Vibrio sp. Ex25] gi|262393498|ref|YP_003285352.1| prolyl-tRNA synthetase [Vibrio sp. Ex25] gi|151937963|gb|EDN56807.1| prolyl-tRNA synthetase [Vibrio sp. Ex25] gi|262337092|gb|ACY50887.1| prolyl-tRNA synthetase [Vibrio sp. Ex25] Length = 571 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 112/236 (47%), Positives = 151/236 (63%), Gaps = 1/236 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSNYLLSTLKETPNDAEVVSHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E +P +Q +LW E+GR + G E+LR DR+ + + PT EEV+T + R+ Sbjct: 61 IDNAGAVETLMPVVQPFELWEETGRSEKMGPELLRFTDRHVRPFVLSPTAEEVITSLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMRSREF M DAYSFD+ +G + SY+ M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRSREFSMMDAYSFDIDKDGLQKSYDAMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 Y + F R+GL P+ A+SG IGG S EF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLDYRPVLADSGAIGGSGSQEFHVLAESGE-DIIAFSTESDYAANIEK 235 Score = 173 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 114/206 (55%), Gaps = 3/206 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPM 298 D I A D+ N D P K + RGIEVGHIF G YS M Sbjct: 366 DGKHYFGINWGRDAELGQVEDLRNVVEGDPSPCGKGIIQLKRGIEVGHIFQLGNAYSAAM 425 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-H 357 + G DGK+ ++MG YGIG RVVAA IE +HD GIIWPD++APF+++++ + Sbjct: 426 NCGVLGPDGKNVILEMGCYGIGITRVVAAAIEQNHDKYGIIWPDAIAPFQVAIVPMNMHK 485 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + ++A EK+YA L+ +G +V +DD E+ G F+ +L+G P +I+G + + + E Sbjct: 486 SEEVKEAAEKLYAELTAMGIEVLFDDRKERPGVMFSDMELIGVPHTIIIGDRSMKEGNFE 545 Query: 418 IKHRLTGIREDMSLEEVINYASHRFS 443 K+R TG + +++ ++I + + Sbjct: 546 YKNRATGEKTPVAMTDIIEHVKAQLK 571 >gi|297205704|ref|ZP_06923099.1| threonine--tRNA ligase [Lactobacillus jensenii JV-V16] gi|297148830|gb|EFH29128.1| threonine--tRNA ligase [Lactobacillus jensenii JV-V16] Length = 656 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 74/434 (17%), Positives = 153/434 (35%), Gaps = 36/434 (8%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L L + + G+ W+P G + I +++ G + P L Sbjct: 251 RDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRVIERYIIDKELADGYQHVYTPVL 308 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y ++M D D M P + +++ HI+SYR LP Sbjct: 309 MNLDAYKTSGHWAHYREDMFPPMDMGDGEMLELRPMNCPSHIQVYKHHIRSYRELPIRIA 368 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + + K+ + ++ + Sbjct: 369 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALEQVQEE-FAKILKLIMDVYKDFDITD 427 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + F + + + DD+ E Sbjct: 428 YYFRLS-------------YRDPKNTDKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGE 474 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ ++ G DG++H Sbjct: 475 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERFD----LSYVGQDGEEHRP 523 Query: 313 -QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + +G M A + + G W + I + + +K+ Sbjct: 524 VMIHRGIVGTMERFIAYLTEIYKGAFPTWLA-----PEQVEIIPVNLDAHGEYAKKVRDE 578 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L K G D E++G + + P +++G ++ + V ++ T +E MSL Sbjct: 579 LLKHGFRAEVDFRNEKMGYKIRESQTQKVPYTLVLGDDEMNSNAVNVRPYGTEKQESMSL 638 Query: 432 EEVINYASHRFSNN 445 ++ I+ + Sbjct: 639 DKFIDELQADVDSY 652 >gi|229117305|ref|ZP_04246683.1| Prolyl-tRNA synthetase [Bacillus cereus Rock1-3] gi|228666205|gb|EEL21669.1| Prolyl-tRNA synthetase [Bacillus cereus Rock1-3] Length = 566 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 121/267 (45%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S ++ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SNYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKALEKVATPDQKAIEEV 266 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 73/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQALI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ + IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGKNIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|154490252|ref|ZP_02030513.1| hypothetical protein PARMER_00484 [Parabacteroides merdae ATCC 43184] gi|154089144|gb|EDN88188.1| hypothetical protein PARMER_00484 [Parabacteroides merdae ATCC 43184] Length = 651 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 81/445 (18%), Positives = 151/445 (33%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L T G+ WLP G + + ++ Q + Sbjct: 230 EYLALMEEAKKRDHRKIGKELELFT-FSTAVGAGLPLWLPRGTQLRLKLEDFLKRIQKKY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 G ++ P + L+V SG Y YGK+ + + + + P + +IF+S Sbjct: 289 GYQQVMTPHIGGKQLYVTSGHYAKYGKDSFQPIHTPQEGEEFLLKPMNCPHHCEIFKSFP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP F + +R E G+ R R F DA+ F + + K+ Sbjct: 349 RSYKDLPLRFAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQLKDE-FLKVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 IF L ++ + D + + S + Sbjct: 408 FIIFKALDFENFEAQISLR--------------DKVNRDKYIGSEENWEKAESAIIEACQ 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + +E A Y D + D++ ++ ++ Sbjct: 454 EKGLKAKIEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFEL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G D K H + G+M AV+ GK +W + I + Sbjct: 503 EYTGEDNKKHRPVMIHRAPFGSMERFVAVLIEHTGGKFPLW------LTPDQVAILPISE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ +L V DD E+IG + +L P +IVG K +++V ++ Sbjct: 557 KFNDYAYEVKRQLEAEDLSVLVDDRNEKIGRKIRDTELKRIPYMLIVGEKEAENNEVSVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M + + Sbjct: 617 KQGEGDKGSMKITTFAALLKGEVED 641 >gi|78485419|ref|YP_391344.1| prolyl-tRNA synthetase [Thiomicrospira crunogena XCL-2] gi|114152273|sp|Q31GQ3|SYP_THICR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|78363705|gb|ABB41670.1| prolyl-tRNA synthetase [Thiomicrospira crunogena XCL-2] Length = 572 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 125/282 (44%), Positives = 174/282 (61%), Gaps = 1/282 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S L +E P DA + SH+LMLR G+I + G+Y+WLPLG + L V AIIR+E Sbjct: 1 MKTSSLLLATTRETPADAVVISHQLMLRAGIIRPLAGGLYNWLPLGVRVLRKVEAIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ A E+ +P +Q +LW ESGR ++YG E+LR DR+ + GPTHEE++TD+ R Sbjct: 61 MNKAQAQELLMPVVQPMELWEESGRAEAYGPELLRFKDRHQREFALGPTHEEIITDLVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP FYQIQ KFRDE+RPRFGVMRSREF+MKDAYSF + + + +Y M+ + Sbjct: 121 EIRSYKQLPANFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHMDKDSLQKTYEDMYDT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P++A++G IGG+ SHEF VLAD+GE + S D D+ E + Sbjct: 181 YNRIFTRLGLDFRPVQADTGSIGGEGSHEFHVLADSGEDDIAFSSD-SDYAANIELAEAL 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 + + + E + D L K+ A+ + Sbjct: 240 APRGERAAATEELTKVETPNKHSIEDVCDFLQLKKKKVAKTL 281 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 64/190 (33%), Positives = 104/190 (54%), Gaps = 3/190 (1%) Query: 259 TSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D + K RGIEVGHIF G KYS ++AT + + ++MG Sbjct: 383 VADIRNVVKGDPSPCGKGKIEIRRGIEVGHIFQLGNKYSEALNATVLNENSRAQILEMGC 442 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSKV 375 YGIG RVVAA IE ++D KGIIWP+++APF++ ++ ++ +A +Y L+ Sbjct: 443 YGIGVTRVVAAAIEQNYDDKGIIWPEAIAPFQVCIVPMQMHKSPRVEEAVMTLYNELTAK 502 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G F +L+G P ++++G + + ++E KHR +D+ E + Sbjct: 503 GIEVLLDDRKERPGVMFNDMELIGIPHRIVIGERGLDKGEIEYKHRRDEKSQDIPEAEFM 562 Query: 436 NYASHRFSNN 445 + + S N Sbjct: 563 EFLLGKLSGN 572 >gi|114767278|ref|ZP_01446118.1| threonyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601] gi|114540584|gb|EAU43657.1| threonyl-tRNA synthetase [Roseovarius sp. HTCC2601] Length = 649 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 80/440 (18%), Positives = 144/440 (32%), Gaps = 44/440 (10%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD ++ L + + G W P G ++ +R +Q+R G Sbjct: 236 YLNFLEEAAKRDHRKLGREMDLF--HLQPEAPGQIFWHPNGWTIYTSLQDYMRRQQHRDG 293 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIY-----GPTHEEVMTDIFRS 120 +E++ P + LW SG +D+Y + M + + A P + IF S Sbjct: 294 YVEVNTPQVVDRKLWEASGHWDNYQENMFIVEVDEEHAREKSINALKPMNCPCHVQIFNS 353 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R E G+MR R F DA+ F + + K Sbjct: 354 GLKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFCTDDQIEAET-KKFIE 412 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 I+ LG + ++ + P S E D + Sbjct: 413 FLAGIYADLGFHNWTIKLSTRPEKRIGSEE-----------------SWDRVEAALGDAC 455 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + E A Y + L D++ + ++ Sbjct: 456 KAAGYGFELQEGEGAFYGPKLEF---TLTDAIGREWQCGTLQVDPNLPDRLD-------- 504 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A++ G DG+ H + +G+ ++ H GK W S+ Sbjct: 505 ASYIGQDGEKHRPVMLHRAVLGSFERFIGILIEEHAGKLPFWLAPRQVVVASIT------ 558 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D ++ A L G D E+I + + P+ + VG + V + V + Sbjct: 559 SEADDYVHEVVAELKAAGVRAEADIRNEKINYKVREHSVGKVPVILAVGHREVEERTVTV 618 Query: 419 KHRLTGIREDMSLEEVINYA 438 + + +L E+ Sbjct: 619 RRLGEKQTKVAALAEITQEL 638 >gi|309378830|emb|CBX22535.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 570 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 120/273 (43%), Positives = 170/273 (62%), Gaps = 5/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P + +ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEVALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+D+ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y M+ + Sbjct: 121 EVNSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHTDYASLQTTYQDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 YCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIELAPTL 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + + + N K DSL + Sbjct: 240 PLKGERAAAQAELV----KVHTPNVKTIDSLVD 268 Score = 159 bits (402), Expect = 8e-37, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 3/196 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A D+ N D P+ + ARGIEVGH+F KY+ M+ +F +GK Sbjct: 374 GRDAAEPEFVDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTKAMNVSFLDNNGK 433 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEK 367 ++MG YGIG RVVAA IE ++D KGIIW ++APF++ ++ + R+A +K Sbjct: 434 SQIMEMGCYGIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADK 493 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 IYA L G DV DD E+ G ++LLG P ++++G + + + VE R + Sbjct: 494 IYAELLAAGADVLLDDRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRENEAQ 553 Query: 428 DMSLEEVINYASHRFS 443 +++ E++ + + Sbjct: 554 AVAIGEIVARVTASLN 569 >gi|118586378|ref|ZP_01543828.1| threonyl-tRNA synthetase 1 [Oenococcus oeni ATCC BAA-1163] gi|118433195|gb|EAV39911.1| threonyl-tRNA synthetase 1 [Oenococcus oeni ATCC BAA-1163] Length = 663 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 77/438 (17%), Positives = 157/438 (35%), Gaps = 30/438 (6%) Query: 11 LQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 L+E RD ++ L + G+ WLP G + + E++ + G + + Sbjct: 240 LEERKERDHRTIGKQMELF-FTNPEIGAGLPVWLPNGAAIRRTIEDYLVEKERQNGYMNV 298 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHIKSYRNL 128 P + + DL+ SG +D Y +M ND + P + +IF +SYR+L Sbjct: 299 YTPVVSNLDLYKRSGHWDHYRDDMFPAMTANDGEQLELRPMNCPSHIEIFEHEPRSYRDL 358 Query: 129 PFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 P+ + R E + + + + PE + + + ++H Sbjct: 359 PYRIAEFGQMHRWEKSGALTGLSRVREMTLNDGHTVVAPEQVEPEFKGILQLIRDVYHDF 418 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 G D + + + + DD+ Sbjct: 419 GFTDQ-----------DYRFRLSYRDPKNTKKYYDDDAMWEHAQAALKRAMDDMGLDYFE 467 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 E A Y D+ + +L + +S ++ F ++ + + G DGK Sbjct: 468 AEGEAAFYGPKLDI---QFKTALGNEETMSTIQLD----FLLPERFDM----KYTGEDGK 516 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 DH + G + + + + +P +AP + +I + D I Sbjct: 517 DHRPVLIHR--GVVGTMERFVAFLIEKYKGQFPTWLAPVQAVVIPVNYG--AHGDYARNI 572 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADL-LGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 Y++L K G + D+ E++G A + L P ++VG + + D+ V ++ R + + Sbjct: 573 YSKLMKDGRRIKLDNRDEKLGYLIRDAQVNLKTPYILVVGDQELRDNSVTVRFRGSDQTK 632 Query: 428 DMSLEEVINYASHRFSNN 445 +M ++E + +N Sbjct: 633 EMKIDEFEEMINDDVANY 650 >gi|16803359|ref|NP_464844.1| prolyl-tRNA synthetase [Listeria monocytogenes EGD-e] gi|224501738|ref|ZP_03670045.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL R2-561] gi|81849855|sp|Q8Y7G2|SYP_LISMO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|16410735|emb|CAC99397.1| prolyl-tRNA synthetase [Listeria monocytogenes EGD-e] Length = 568 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 123/294 (41%), Positives = 166/294 (56%), Gaps = 5/294 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E YN M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--- 237 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D+ +E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYSD-ASDYAANTEMAPVL 239 Query: 238 -DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 L +E+ P + L + + + ++ I Sbjct: 240 YMEKKSHELEKDLEKVATPDQKSITDIVGFLEVPIEKTMKSMLYQVDDEVIMVL 293 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 65/180 (36%), Positives = 100/180 (55%), Gaps = 3/180 (1%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ ++ D P+ + V GIEVGHIF GTKYS M+AT +G+ + MG YG Sbjct: 383 DLRMIQVGDLSPDGQGVIKFAEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R+++A+ E S+D G +W ++PF + LI + + E +Y L G Sbjct: 443 IGVSRILSAIAEQSNDENGFVWDKQISPFDLHLIPVNMKSEEQVAFAETLYTSLQDAGFS 502 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G +FA ADL+G P+++ VG K ++ VE+K R TG ++ +E++N Sbjct: 503 VLIDDRAERAGVKFADADLIGLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDELLNTL 561 >gi|42520791|ref|NP_966706.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila melanogaster] gi|73919843|sp|Q73GH6|SYT_WOLPM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|42410531|gb|AAS14640.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila melanogaster] Length = 633 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 84/442 (19%), Positives = 155/442 (35%), Gaps = 40/442 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L L+E RD + + L I + + G W G + + + IR++ Sbjct: 227 NAYLECLKEAEKRDHRKIAKDMDLF--HIQEEAVGQVFWHEQGYILYNVLESYIRKKLIN 284 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L S +LW SG +D + + M + + +K + P + IF SH + Sbjct: 285 NGYFEVKTPILVSKELWERSGHWDKFRENMFIVDESENKKLAIKPMNCPCHVQIFNSHTR 344 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F DA+ F + + + + Sbjct: 345 SYRDLPIRMAEFGTCHRNESSGSLHGLMRVRGFTQDDAHIFCMEEQVNSETIKF-CDLLK 403 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ LG I ++ P + E D + + Sbjct: 404 EVYSELGFNEISVKFSDRPDIRAGNDE-----------------VWDRAEKALLEAVKEA 446 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + L D++ N + ++ G A + Sbjct: 447 GLSYKLNPGEGAFYGPKLEF---VLKDAIGRNWQCGTLQVDFILPERLG--------AFY 495 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 GADG H+ + +G ++ ++ GK +W +++ N Sbjct: 496 IGADGHKHHPVMLHRAILGTFERFIGILIENYAGKFPVWLAPTQLAILTITN------EA 549 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +I L + G V D E+I + + P+ IVG V+ V +++ Sbjct: 550 DGYATEISNILKEQGVRVKTDLTNEKISYKIRLHSSNKVPILWIVGKNEVTSKTVSVRNL 609 Query: 422 LTGIREDMSLEEVINYASHRFS 443 + +E SLE+ + Sbjct: 610 GSERQESFSLEKANESLLKSIN 631 >gi|75760863|ref|ZP_00740877.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218898971|ref|YP_002447382.1| prolyl-tRNA synthetase [Bacillus cereus G9842] gi|228902322|ref|ZP_04066479.1| Prolyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] gi|228966764|ref|ZP_04127808.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] gi|226731427|sp|B7IUH7|SYP_BACC2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|74491647|gb|EAO54849.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218543850|gb|ACK96244.1| prolyl-tRNA synthetase [Bacillus cereus G9842] gi|228792863|gb|EEM40421.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] gi|228857291|gb|EEN01794.1| Prolyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] Length = 566 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 123/267 (46%), Positives = 166/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E A E++ Sbjct: 240 ATYTKSDEAEMALEKVATPDQKAIEEV 266 Score = 166 bits (419), Expect = 9e-39, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EKGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|291566398|dbj|BAI88670.1| prolyl-tRNA synthetase [Arthrospira platensis NIES-39] Length = 601 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 124/276 (44%), Positives = 164/276 (59%), Gaps = 7/276 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + G+Y++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLREDPTEAEIPSHKLLLRAGYIRRIGSGVYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N TGA E +P +Q ++LW ESGR+D+Y K M L DR D+++ GPTHEEV+T + Sbjct: 61 MNATGAQECLLPQVQPSELWKESGRWDTYTKAEGIMFSLKDRRDRSLALGPTHEEVITAV 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF + E K +Y M Sbjct: 121 ARDMIRSYQQLPLHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHTSEESLKQTYQDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y I R GL + A+SG IGG S EF+VLAD GE +V + D + E Sbjct: 181 DRAYRNILRRCGLDFCAVEADSGAIGGSGSQEFMVLADAGEDEVLYTPDG-KYAANVEKA 239 Query: 238 ---DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 D + S + E+ P AT E L S Sbjct: 240 VSLPPDAVASGFTTYEKLETPNTATIATLCEFLKCS 275 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 61/172 (35%), Positives = 96/172 (55%), Gaps = 1/172 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P SARGIEVGHIF GTKYS M AT+ G+D + MG YG+G R+ A +E Sbjct: 428 PSQTLESARGIEVGHIFQLGTKYSQAMGATYTSETGEDLPLVMGCYGVGVSRLAQAAVEQ 487 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 S+D GIIWP ++AP+ + D +++Y++L++ G + DD E+ G + Sbjct: 488 SYDKDGIIWPVAIAPYHAIITVPNVSDNQQMAIAQQLYSQLNQAGVETLLDDRNERAGVK 547 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 F ADL+G P +++ G + + KVE+ R ++ +E+V++ + S Sbjct: 548 FKDADLVGIPYRIVTG-RAIKSGKVELVQRADHESSEVPIEQVVSLLQQKIS 598 >gi|126729010|ref|ZP_01744825.1| threonyl-tRNA synthetase [Sagittula stellata E-37] gi|126710940|gb|EBA09991.1| threonyl-tRNA synthetase [Sagittula stellata E-37] Length = 660 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 73/455 (16%), Positives = 143/455 (31%), Gaps = 55/455 (12%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K+ + + RD ++ L + + + G W P G + +R +Q Sbjct: 234 LKKHLNMLEEAAKRDHRKLGREMDLF--HMQEEAPGQVFWHPNGWTIYTTLQEYMRRKQR 291 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA--DRNDKAMIY-------------- 106 G E++ P + LW SG ++ Y M + + D Sbjct: 292 AGGYQEINTPQVVDRKLWEASGHWEKYQHHMFIVEVDESRDGEHDDATAKNKEQTRINAL 351 Query: 107 GPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDL 165 P + +F +KSYR+LP + R E G+MR R F DA+ F Sbjct: 352 KPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCARYEPSGALHGIMRVRGFTQDDAHIFC- 410 Query: 166 TPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 T + + + I+ LG + ++ + P + E Sbjct: 411 TEDQIEAECARFIEFLADIYRELGFPTFEIKFATRPEKRVGTEE---------------- 454 Query: 226 DFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 D+ + ++ A Y D + L D++ + ++ Sbjct: 455 -SWDYVENALEEAIRKTGRTYTLEPGDGAFYGPKLDFY---LTDAIGRVWQCGTFQVDPN 510 Query: 286 HIFYFGTKYSLPMSATFKGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSV 344 G A++ +G + +G+ ++ H GK W Sbjct: 511 LPERLG--------ASYIAPNGDKTRPFMLHRATLGSFERFVGILIEEHAGKLPFWLAPR 562 Query: 345 APFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQV 404 S+ D +++ L K G D E+I + + P+ + Sbjct: 563 QVVVASIT------SEADDYVQEVTELLRKAGVRAEADIRNEKINYKVREHSVGKVPVIL 616 Query: 405 IVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 +G + V + V ++ SL ++++ S Sbjct: 617 AIGHREVEERTVTVRRLGEKQTSVTSLTDIVSELS 651 >gi|229162755|ref|ZP_04290712.1| Prolyl-tRNA synthetase [Bacillus cereus R309803] gi|228620637|gb|EEK77506.1| Prolyl-tRNA synthetase [Bacillus cereus R309803] Length = 566 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 121/267 (45%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S ++ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SNYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKALEKVATPDQKAIEEV 266 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 108/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY+ L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDESGLVWPKAVAPFHVHVIPVNMKSDAQREMGESIYSSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|229098288|ref|ZP_04229235.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-29] gi|228685186|gb|EEL39117.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-29] Length = 566 Score = 231 bits (590), Expect = 2e-58, Method: Composition-based stats. Identities = 121/267 (45%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S ++ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SNYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKALEKVATPDQKAIEEV 266 Score = 166 bits (419), Expect = 1e-38, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQALI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|262165127|ref|ZP_06032864.1| prolyl-tRNA synthetase [Vibrio mimicus VM223] gi|262172111|ref|ZP_06039789.1| prolyl-tRNA synthetase [Vibrio mimicus MB-451] gi|261893187|gb|EEY39173.1| prolyl-tRNA synthetase [Vibrio mimicus MB-451] gi|262024843|gb|EEY43511.1| prolyl-tRNA synthetase [Vibrio mimicus VM223] Length = 571 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 123/290 (42%), Positives = 168/290 (57%), Gaps = 20/290 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY+ M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFSMMDAYSFDIDKEGLQKSYDAMHAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN---- 236 Y + F R+GL P+ A+SG IGG+ S EF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLDYRPVLADSGAIGGNGSQEFHVLAESGEDLIVF-STESDYAANIEKAEAL 239 Query: 237 ---------------TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 D + ++ +VEQ P T K D++ Sbjct: 240 APAAEAAAPTQEMTLVDTPNAKTIAELVEQHGLPIEKTVKTLFVKASDAI 289 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 69/190 (36%), Positives = 112/190 (58%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N D + + RGIEVGHIF GT YS M+ ++GK+ ++M Sbjct: 382 GKVEDLRNVVEGDPSPCGKGTLMLKRGIEVGHIFQLGTNYSAKMNCGVLDSNGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVAA IE +HD GIIWPD++APF+++++ + + ++A EK+YA L+ Sbjct: 442 GCYGIGVSRVVAAAIEQNHDDYGIIWPDAIAPFQVAIVPMNMHKSERVQEAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G +V +DD E+ G F+ +L+G P VI+G + + + E K+R G +E +++E Sbjct: 502 AAGIEVLFDDRKERPGVMFSDMELIGVPHTVIIGDRSMDEGHFEYKNRRNGEKEAVAMES 561 Query: 434 VINYASHRFS 443 +I++ + + Sbjct: 562 IIDFIQAKLA 571 >gi|116872750|ref|YP_849531.1| prolyl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] gi|123463747|sp|A0AIC0|SYP_LISW6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116741628|emb|CAK20752.1| prolyl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 568 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 123/279 (44%), Positives = 165/279 (59%), Gaps = 3/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + AIIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLLPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E Y M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYKLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD-- 238 Y IF R GL+ + A+SG IGG+ S EF+ L++ GE + S D+ +E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSEIGEDTIAYSD-ASDYAANTEMAPVL 239 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV 277 + + S E A + + F +P K + Sbjct: 240 YMEKKSHELEKELEKVATANQKFIADIVEFLEVPIEKTI 278 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 66/180 (36%), Positives = 101/180 (56%), Gaps = 3/180 (1%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ + D P+ + V GIEVGHIF GTKYS M+AT +G+ + MG YG Sbjct: 383 DLRMIQAGDLSPDGQGVIKFAEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R+++A+ E S+D G++W ++PF + LI + + E +Y L K G Sbjct: 443 IGVSRILSAIAEQSNDENGLVWDKQISPFDLHLIPVNMKSEEQVAFAESLYDSLQKAGFS 502 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G +FA ADL+G P+++ VG K ++ VE+K R TG ++ +E++N Sbjct: 503 VLIDDRAERAGVKFADADLIGLPIRITVGKK-AAEGIVEVKIRKTGEMIEVRQDELLNTL 561 >gi|325290366|ref|YP_004266547.1| Prolyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271] gi|324965767|gb|ADY56546.1| Prolyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271] Length = 571 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 119/270 (44%), Positives = 159/270 (58%), Gaps = 10/270 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ P L+E P +AEI SH+LMLR G I + + G+Y++LPL + L + IIREE Sbjct: 1 MRVSQLLNPTLREVPAEAEIVSHQLMLRAGFIRKVAGGVYTYLPLALRVLRKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N G E+ +P +Q ++LW E+ R+D YG EM RL DR+D+ GPTHEEV+TD+ R Sbjct: 61 MNAKGGQELLLPIVQPSELWKETKRWDIYGPEMFRLKDRHDREFCLGPTHEEVITDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ K+RDE RPRFG+MR REF+MKD YSFD E SY KM+ + Sbjct: 121 EVRSYKQLPLLLYQIQNKYRDERRPRFGLMRGREFIMKDLYSFDRDAEAGAESYRKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAE-SGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTD 238 Y +IF R GL P+ A+ G +HEF+VLAD+GE VFC + + Sbjct: 181 YTKIFSRCGLTFRPVEADAGAIGGTGGTHEFMVLADSGEAAVVFCPACAYAANVEKAESQ 240 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 DI AP +VH + Sbjct: 241 PADIGG--------NAPVEGKKEVHTPTVK 262 Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 102/193 (52%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + Y + ARGIEVG +F GTKYS + AT+ G++ Sbjct: 377 DFKPDYVLDLRMVEAGEPCPCCGVPLQEARGIEVGQVFNLGTKYSEALKATYLDEKGQEK 436 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 MG YGIG R +AA IE +HD G+IWP +APF+ ++ + + + EK+YA Sbjct: 437 LCYMGCYGIGVSRTMAAAIEQNHDTNGVIWPIPIAPFECIIVPVSLKSEAVVETSEKLYA 496 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 ++ + G +V DD E+ G +F ADL+G+PL++ +G K +++ KVE+ R TG E + Sbjct: 497 QMLEAGIEVIIDDRDERPGVKFKDADLIGYPLRINIGEKSLAEGKVELFRRKTGQMELLD 556 Query: 431 LEEVINYASHRFS 443 +E+V+ Sbjct: 557 IEQVMTTVMSMIK 569 >gi|157145208|ref|YP_001452527.1| hypothetical protein CKO_00941 [Citrobacter koseri ATCC BAA-895] gi|157082413|gb|ABV12091.1| hypothetical protein CKO_00941 [Citrobacter koseri ATCC BAA-895] Length = 652 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 72/436 (16%), Positives = 140/436 (32%), Gaps = 39/436 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + + RD +L L ++ G W P G ++ A +R G Sbjct: 243 WLEKTAEAEKRDHRKLGRELDLF--HFQDNAPGAVFWHPRGWTIFQSLIAYMRSRHEVAG 300 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E++ P + LW SG +D+Y M + + P + +F+ IKSY Sbjct: 301 YVEVNTPDVMDRSLWEISGHWDNYRDHMFTTQTEDGRNFALKPMNCPGAVSLFKYGIKSY 360 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R E G++R R F DA+ F + + L I Sbjct: 361 RDLPVRLSEFGKVHRYEPSGSLHGLLRVRHFTQDDAHIFCTLQQVEGEC-KSILQLVLDI 419 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + G + + ++ + P S D + + + Sbjct: 420 YKQFGFEEVAIKLSTRPEKR-----------------MGSDADWDRLENALSASLEAQGL 462 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 S+ A Y + L D++ + + +++ + Sbjct: 463 QWSVNPGEGAFYGPKLEF---VLRDAIGRDWQCGTLQVDMNLP--------ERFDIGYIA 511 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + G++ ++ + P ++P + ++ I Sbjct: 512 EDGSTKRPVMLHRALFGSLERFTGILL---EHYVGKLPAWLSPVQAVVMTITDK---QHH 565 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E++ L K G D E+IG L P +IVG + ++V ++ R Sbjct: 566 YAEQVLKALRKKGLRCEADLRNEKIGFIIREQTLARIPFLLIVGDAEENAARVTVRDRTG 625 Query: 424 GIREDMSLEEVINYAS 439 + L E + Sbjct: 626 RCMGTLLLNEAADAIK 641 >gi|186680962|ref|YP_001864158.1| prolyl-tRNA synthetase [Nostoc punctiforme PCC 73102] gi|226701314|sp|B2J707|SYP_NOSP7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|186463414|gb|ACC79215.1| prolyl-tRNA synthetase [Nostoc punctiforme PCC 73102] Length = 604 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 116/240 (48%), Positives = 151/240 (62%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+++P DAEI SHKL+LR G I + G+Y++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLRDDPADAEIPSHKLLLRAGYIRRIGSGLYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N TGA E +P LQ ADLW ESGR+D+Y K M L DR ++ + GPTHEEV+T I Sbjct: 61 MNATGAQECLLPQLQPADLWKESGRWDTYTKAEGIMFSLIDRREQQLGLGPTHEEVITAI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF K +Y M Sbjct: 121 ARDMIRSYRQLPLHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHTDEASLKETYQDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 + +Y I R GL + A+SG IGG S EF++LA+ GE +V ++D + E Sbjct: 181 YKAYSNILRRSGLAFRAVEADSGAIGGSGSTEFMILAEAGEDEVLYTEDG-KYAANVEKA 239 Score = 169 bits (427), Expect = 9e-40, Method: Composition-based stats. Identities = 63/198 (31%), Positives = 103/198 (52%), Gaps = 3/198 (1%) Query: 247 SIVEQWTAPYAATSDVHNEKLFDSL--PENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + EQ+ P + ++ PE SARGIE GHIF GTKYS M AT+ Sbjct: 400 NWDEQFKLPERVVDIRKSRPGDRAIHNPEQTLQSARGIEAGHIFQLGTKYSQAMGATYTN 459 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 G++ + MG +G+G R+ A +E S+D GIIWP ++AP+ + D + Sbjct: 460 EQGEEKPLLMGCFGVGVSRLAQAAVEQSYDNDGIIWPVAIAPYHAIVTIPNIKDAQQVEV 519 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +K+Y L++ G + DD E+ G +F ADL+G P +++ G + +++ KVE+ R T Sbjct: 520 AQKLYTELNQAGIETLLDDRDERAGVKFKDADLIGIPYRIVTG-RAIANGKVEVVERATR 578 Query: 425 IREDMSLEEVINYASHRF 442 +++ ++EV Sbjct: 579 KSQEIVIDEVTTTLQQWI 596 >gi|302527884|ref|ZP_07280226.1| threonyl-tRNA synthetase [Streptomyces sp. AA4] gi|302436779|gb|EFL08595.1| threonyl-tRNA synthetase [Streptomyces sp. AA4] Length = 678 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 59/436 (13%), Positives = 125/436 (28%), Gaps = 36/436 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + G+ + P G + R G ++ Sbjct: 262 EAERRDHRKLGAELDLFS-FPEEIGSGLPVFHPKGGIIRRELENYSRRRHEEAGYEFVNT 320 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + DL+ SG Y M ++ + + IFRS +SYR LP Sbjct: 321 PHISKGDLFHTSGHLPYYADTMFPPVQFEEEDYYLKAMNCPMHNLIFRSRGRSYRELPLR 380 Query: 132 FYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 ++ +R E G+ R R M D++ + + + L + GL Sbjct: 381 LFEFGTVYRYEKSGVVHGLTRVRGLTMDDSHIYCTKEQMPSEL-RSLLKFVLDLLADYGL 439 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + + E + + D Sbjct: 440 SDFYLELSTRGDSDKFIGE---------------DWEWEEATETLRQAAVDSGLELVPDP 484 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y + + D++ ++S ++ + + DG Sbjct: 485 GGAAFYGPKI---SVQAKDAIGRTWQMSTIQLDFNQ--------NKRFGLEYTAPDGSRQ 533 Query: 311 YV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + G++ V+ + +P ++P + I I + + Sbjct: 534 RPIMIHRALFGSIERFFGVLT---EHYAGAFPAWLSPVQTVAIPIT---ADQVEYLRGVE 587 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 L G V D +++ + P ++ G+K V + R G + Sbjct: 588 KALRAKGIRVEVDASDDRMQKKIRTHTTQKVPFLLLAGAKDAEAGAVSFRFRDGGQINGV 647 Query: 430 SLEEVINYASHRFSNN 445 +++ + + + Sbjct: 648 PVDQAVEAIAEWVARR 663 >gi|46199818|ref|YP_005485.1| threonyl-tRNA synthetase [Thermus thermophilus HB27] gi|73919837|sp|Q72HH1|SYT_THET2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|46197445|gb|AAS81858.1| threonyl-tRNA synthetase [Thermus thermophilus HB27] Length = 659 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 85/451 (18%), Positives = 156/451 (34%), Gaps = 41/451 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQ 61 +Y + + RD +L L +I KG+ WLP G + + A +REEQ Sbjct: 238 LKEYLWQLEEAKKRDHRRLGRELELF--LIDPMVGKGLVLWLPKGNVVREELMAFMREEQ 295 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK----AMIYGPTHEEVMTDI 117 R G ++ P + S +L+ SG Y Y + ++ + P + I Sbjct: 296 VRRGYQLVTTPHIGSLELYKTSGHYPYYAESQFPPISFKERGEEEEYLLKPMNCPHHIRI 355 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 + +SYR LP + +R E G+ R R F DA+ F E + Sbjct: 356 YAYRKRSYRELPLRLAEFGTVYRYEKAGELLGLTRVRGFTQDDAHIFCTPEEVKGE-FLG 414 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + L++F LGLK R I + D + + Sbjct: 415 VLDLVLKVFATLGLKDYRAR--------------IGVRDPKSDKYVGDEAKWALAERQIE 460 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + ++ E A Y D + D+L ++ ++ FG Sbjct: 461 EAAAEAGLRYTVEEGDAAFYGPKLDF---VVKDALGREWQLGTIQVDYNLPERFG----- 512 Query: 297 PMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 T+ G DG++H + G++ ++ G +W V + + Sbjct: 513 ---LTYVGKDGEEHRPVMLHRAPFGSLERFIGILIEHFAGDFPLWLAPVQAVVVPV---- 565 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + ++ RL + G D E++ ++ A++ P ++VG + ++ Sbjct: 566 --SEKQEGYAREVAGRLKEAGLRAEADTRPERMQARIRDAEVQKVPYVLVVGEREKAEGA 623 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 V ++ R G M L + A + R Sbjct: 624 VSVRRRKKGNLGTMPLAAFLEGALREYRERR 654 >gi|258625204|ref|ZP_05720117.1| prolyl-tRNA synthetase [Vibrio mimicus VM603] gi|258582494|gb|EEW07330.1| prolyl-tRNA synthetase [Vibrio mimicus VM603] Length = 571 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 123/290 (42%), Positives = 168/290 (57%), Gaps = 20/290 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ EG + SY+ M + Sbjct: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFSMMDAYSFDIDKEGLQKSYDAMHAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN---- 236 Y + F R+GL P+ A+SG IGG+ S EF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLDYRPVLADSGAIGGNGSQEFHVLAESGEDLIVF-STESDYAANIEKAEAL 239 Query: 237 ---------------TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 D + ++ +VEQ P T K D++ Sbjct: 240 APAAEAAAPTQEMTLVDTPNAKTIAELVEQHGLPIEKTVKTLFVKASDAI 289 Score = 174 bits (441), Expect = 3e-41, Method: Composition-based stats. Identities = 69/190 (36%), Positives = 112/190 (58%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N D + + RGIEVGHIF GT YS M+ ++GK+ ++M Sbjct: 382 GKVEDLRNVVEGDPSPCGKGTLMLKRGIEVGHIFQLGTNYSAKMNCGVLDSNGKNAILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVAA IE +HD GIIWPD++APF+++++ + + ++A EK+YA L+ Sbjct: 442 GCYGIGVSRVVAAAIEQNHDDYGIIWPDAIAPFQVAIVPMNMHKSERVQEAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G +V +DD E+ G F+ +L+G P VI+G + + + E K+R G +E +++E Sbjct: 502 AAGIEVLFDDRKERPGVMFSDMELIGVPHTVIIGDRSMDEGHFEYKNRRNGEKEAVAMES 561 Query: 434 VINYASHRFS 443 +I++ + + Sbjct: 562 IIDFIQAKLA 571 >gi|311030092|ref|ZP_07708182.1| prolyl-tRNA synthetase [Bacillus sp. m3-13] Length = 561 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 121/265 (45%), Positives = 167/265 (63%), Gaps = 5/265 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S +P L+E P DAE+ SH+L+LR G I Q++ GIYS+LPLG+K L V ++REE Sbjct: 1 MKQSNMLIPTLREVPADAEVKSHQLLLRAGYIRQNTSGIYSFLPLGKKVLKKVEDVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA+E+ +P +Q+A+LW ESGR+ SYG E++RL DR+++ G THEEV+T + R Sbjct: 61 MENAGAVELLMPAMQAAELWKESGRWYSYGPELMRLNDRHNREFALGATHEEVITTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP + YQIQ KFRDE RPRFG++R REFLMKDAYSF E +Y KMF + Sbjct: 121 EVKSYKKLPLSLYQIQTKFRDEKRPRFGLLRGREFLMKDAYSFHANAESLDETYEKMFTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN---- 236 Y IF RLGL + A+SG +GG +HEF+VL+D GE + F E Sbjct: 181 YSNIFTRLGLNFRAVIADSGAMGGKDTHEFMVLSDIGEDTIAY-STESSFAANIEMAPVV 239 Query: 237 TDFDDIISLNSIVEQWTAPYAATSD 261 +++ +E+ P T D Sbjct: 240 ANYEKKSEAAREMEKVNTPDQKTID 264 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 77/205 (37%), Positives = 113/205 (55%), Gaps = 3/205 (1%) Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKY 294 T ++ N V A +D+ + D P+ + V +GIEVGHIF GT+Y Sbjct: 358 TGANEEGIHNINVNPSRDFNAQYTDLRFIEEGDLSPDGQGVIKFAKGIEVGHIFKLGTRY 417 Query: 295 SLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 S M A F +G++ + MG YGIG RV+AA++E HD GI+WP +V PF + +I + Sbjct: 418 SEAMGANFLDENGRNQPMIMGCYGIGVSRVLAAIVEQYHDENGIVWPKAVTPFDVHVIPV 477 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 ++ E+IY+ L G V DD E+ G +FA ADL+G P++V VG K + Sbjct: 478 NIKNEAQASLAEEIYSELKNSGLAVLMDDRQERPGVKFADADLIGLPVRVTVGKK-AEER 536 Query: 415 KVEIKHRLTGIREDMSLEEVINYAS 439 VE+K R TG E++S+EE+I Sbjct: 537 IVEVKWRETGDMEELSVEELIQKLR 561 >gi|308233721|ref|ZP_07664458.1| prolyl-tRNA synthetase [Atopobium vaginae DSM 15829] Length = 575 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 115/261 (44%), Positives = 161/261 (61%), Gaps = 1/261 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R SK + P L+E+P DA+IASHKL++R GMI + + G+YS+LPL +++ + +IIREE Sbjct: 6 RMSKLYAPTLKEDPTDADIASHKLLVRAGMIRKAAAGLYSYLPLAWRSIQKIESIIREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 A EM P L A+LW +SGR+ +YG E++RL DR+D GPTHEE TD+ R+ Sbjct: 66 EAIDAQEMLAPILTDAELWHQSGRWGAYGPELMRLTDRHDHEYALGPTHEETFTDLIRNE 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +KSY++LP T Y IQ KFRDE RPRFG+MR REF+MKD YSF E Y + +Y Sbjct: 126 LKSYKDLPVTLYHIQDKFRDERRPRFGLMRGREFIMKDGYSFCANQESLHECYEQEKDAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTDFD 240 I R GL+++P+ A+SG IGGD S EF+ LAD GE + ++C + + Sbjct: 186 ATIARRCGLRAVPVVADSGQIGGDTSVEFMALADAGEAELIYCDACDYAADTEAAVGQIN 245 Query: 241 DIISLNSIVEQWTAPYAATSD 261 + + E+ P T + Sbjct: 246 VLDDEVAACEKIKTPACQTIE 266 Score = 166 bits (420), Expect = 8e-39, Method: Composition-based stats. Identities = 80/194 (41%), Positives = 114/194 (58%), Gaps = 2/194 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 D+ + DS P SARGIE+ +F GTKYS M ATF DG + MG Sbjct: 380 EWQDLIVTEAGDSCPCCSAALKSARGIEISQVFQLGTKYSKAMGATFMDEDGTEKPFIMG 439 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R +AAV+E SHD GIIWP SVAP+++++I + HD+ +++ L K Sbjct: 440 CYGIGVSRTLAAVVEQSHDEHGIIWPVSVAPYEVAVIPLDVHDETVWPVAQRLAEGLIKA 499 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD GE+ G +F ADL+GFP QV+ G K ++ + VE+K+R TG R ++ ++EV+ Sbjct: 500 GIEVIVDDRGERPGIKFNDADLMGFPYQVVCGKKALAHACVEVKNRATGERTEVPVDEVV 559 Query: 436 NYASHRFSNNRPVL 449 ++ H R L Sbjct: 560 DHLVHEIVPQRQGL 573 >gi|116490538|ref|YP_810082.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Oenococcus oeni PSU-1] gi|116091263|gb|ABJ56417.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Oenococcus oeni PSU-1] Length = 663 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 76/438 (17%), Positives = 157/438 (35%), Gaps = 30/438 (6%) Query: 11 LQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 L+E RD ++ L + G+ WLP G + + E++ + G + + Sbjct: 240 LEERKERDHRTIGKQMELF-FTNPEIGAGLPVWLPNGAAIRRTIEDYLVEKERQNGYMNV 298 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHIKSYRNL 128 P + + DL+ SG +D Y +M +D + P + +IF +SYR+L Sbjct: 299 YTPVVSNLDLYKRSGHWDHYRDDMFPAMTADDGEQLELRPMNCPSHIEIFEHEPRSYRDL 358 Query: 129 PFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 P+ + R E + + + + PE + + + ++H Sbjct: 359 PYRIAEFGQMHRWEKSGALTGLSRVREMTLNDGHTVVAPEQVEPEFKGILQLIRDVYHDF 418 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 G D + + + + DD+ Sbjct: 419 GFTDQ-----------DYRFRLSYRDPKNTKKYYDDDAMWEHAQAALKRAMDDMGLDYFE 467 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 E A Y D+ + +L + +S ++ F ++ + + G DGK Sbjct: 468 AEGEAAFYGPKLDI---QFKTALGNEETMSTIQLD----FLLPERFDM----KYTGEDGK 516 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 DH + G + + + + +P +AP + +I + D I Sbjct: 517 DHRPVLIHR--GVVGTMERFVAFLIEKYKGQFPTWLAPVQAVVIPVNYG--AHGDYARNI 572 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADL-LGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 Y++L K G + D+ E++G A + L P ++VG + + D+ V ++ R + + Sbjct: 573 YSKLMKDGRRIKLDNRDEKLGYLIRDAQVNLKTPYILVVGDQELRDNSVTVRFRGSDQTK 632 Query: 428 DMSLEEVINYASHRFSNN 445 +M ++E + +N Sbjct: 633 EMKIDEFEEMINDDVANY 650 >gi|256850831|ref|ZP_05556220.1| threonyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN] gi|260661042|ref|ZP_05861956.1| threonyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN] gi|256615893|gb|EEU21081.1| threonyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN] gi|260547979|gb|EEX23955.1| threonyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN] Length = 643 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 74/434 (17%), Positives = 153/434 (35%), Gaps = 36/434 (8%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L L + + G+ W+P G + I +++ G + P L Sbjct: 238 RDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRVIERYIIDKELADGYQHVYTPVL 295 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y ++M D D M P + +++ HI+SYR LP Sbjct: 296 MNLDAYKTSGHWAHYREDMFPPMDMGDGEMLELRPMNCPSHIQVYKHHIRSYRELPIRIA 355 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + + K+ + ++ + Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALEQVQEE-FAKILKLIMDVYKDFDITD 414 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + F + + + DD+ E Sbjct: 415 YYFRLS-------------YRDPKNTDKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGE 461 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ ++ G DG++H Sbjct: 462 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERFD----LSYVGQDGEEHRP 510 Query: 313 -QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + +G M A + + G W + I + + +K+ Sbjct: 511 VMIHRGIVGTMERFIAYLTEIYKGAFPTWLA-----PEQVEIIPVNLDAHGEYAKKVRDE 565 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L K G D E++G + + P +++G ++ + V ++ T +E MSL Sbjct: 566 LLKHGFRAEVDFRNEKMGYKIRESQTQKVPYTLVLGDDEMNSNAVNVRPYGTEKQESMSL 625 Query: 432 EEVINYASHRFSNN 445 ++ I+ + Sbjct: 626 DKFIDELQADVDSY 639 >gi|17232545|ref|NP_489093.1| prolyl-tRNA synthetase [Nostoc sp. PCC 7120] gi|81852728|sp|Q8YM83|SYP_ANASP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|17134191|dbj|BAB76752.1| prolyl-tRNA synthetase [Nostoc sp. PCC 7120] Length = 604 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 115/240 (47%), Positives = 153/240 (63%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+++P DAEI SHKL+LR G I + GIY++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLRDDPSDAEIPSHKLLLRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N TGA E +P LQ ++LW ESGR+D+Y K M L DR ++ + GPTHEEV+T I Sbjct: 61 MNATGAQECLLPQLQPSELWKESGRWDTYTKAEGIMFSLIDRREQQLGLGPTHEEVITAI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQ+Q KFRDE+RPRFG+MR REF+MKD YSF + + K +Y M Sbjct: 121 ARDMIRSYRQLPLHLYQLQTKFRDEIRPRFGLMRGREFIMKDGYSFHVDEDSLKKTYQDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 + +Y + R GL P+ A+SG IGG S EF+VLA+ GE +V + D + E Sbjct: 181 YQAYSNMLRRAGLAFRPVEADSGAIGGSGSTEFMVLAEAGEDEVLYTDDG-KYAANVEKA 239 Score = 166 bits (419), Expect = 1e-38, Method: Composition-based stats. Identities = 61/168 (36%), Positives = 96/168 (57%), Gaps = 1/168 (0%) Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 SARGIEVGHIF GTKYS + AT+ G++ + MG YG+G R+ + +E S+D Sbjct: 431 LKSARGIEVGHIFQLGTKYSQALGATYTNEQGEEKPLVMGCYGVGVSRLAQSAVEQSYDK 490 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 GIIWP ++AP+ + +D + EK+Y L++ G + DD E+ G +F A Sbjct: 491 DGIIWPVAIAPYHAIVTIPNINDAQQVEIAEKLYTELNQSGVETLLDDRNERAGVKFKDA 550 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 DL+G P +++ G + +++ KVEI R T +++ ++EVI Sbjct: 551 DLIGIPYRIVTG-RAITNGKVEIVERATRQSQEIPIDEVITTLQQWIR 597 >gi|325685802|gb|EGD27875.1| threonine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 643 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 74/433 (17%), Positives = 153/433 (35%), Gaps = 34/433 (7%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L L + + G+ W+P G + I +++ G + P L Sbjct: 238 RDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRIIERYIVDKEVAAGYQHVYTPVL 295 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y ++M + M P + I++ HI+SYR LP Sbjct: 296 MNLDAYKTSGHWAHYREDMFPPMGMGEGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIA 355 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + + + + ++H + Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEE-FARTLQIIMDVYHDFDIND 414 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + F + + + DD+ E Sbjct: 415 YYFRLS-------------YRDPKNTDKYFANDEMWERSQSMLKAAMDDMGLDYVEAEGE 461 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ ++ GADG++H Sbjct: 462 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----ELSYIGADGEEHRP 510 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 M G + + I + +P +AP + +I + D +K+ L Sbjct: 511 VMIHR--GIVGTMERFIAYLTEIYKGAFPTWLAPVQAEIIPVNL--DAHSDYAKKVRDEL 566 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G D E++G + + P +++G ++ V ++ T + SL Sbjct: 567 VAKGFRAEIDFRNEKLGYKIRESQTQKVPYTLVLGDDEMNAGTVNVRPYGTEEQNSESLA 626 Query: 433 EVINYASHRFSNN 445 E ++ S ++ Sbjct: 627 EFMDKLSKDVASY 639 >gi|229031449|ref|ZP_04187449.1| Prolyl-tRNA synthetase [Bacillus cereus AH1271] gi|228729738|gb|EEL80718.1| Prolyl-tRNA synthetase [Bacillus cereus AH1271] Length = 566 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 121/267 (45%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S ++ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SNYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKALEKVATPDQKAIEEV 266 Score = 166 bits (419), Expect = 9e-39, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|237738009|ref|ZP_04568490.1| prolyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817] gi|229419889|gb|EEO34936.1| prolyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817] Length = 569 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 127/289 (43%), Positives = 173/289 (59%), Gaps = 5/289 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++ L+E P++AEIASHKL+LR GMI + + G+Y++LPLG KAL V I+R E Sbjct: 1 MRFSKSYIKTLKETPKEAEIASHKLLLRAGMIKKLTSGVYTYLPLGLKALKKVENIVRRE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P LQ A+LW ESGR++ G M++L DR + + GPTHEEV+TD+ R+ Sbjct: 61 MDRAGAQEIFMPVLQPAELWKESGRWEVMGPLMMKLQDRAKRDFVLGPTHEEVVTDVIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF T E ++ M + Sbjct: 121 DVASYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHATRESLDEEFDNMEAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--- 237 Y RIF GLK P+ A+SG IGG S EF VLAD+GE ++ + D+ E Sbjct: 181 YKRIFSSCGLKFRPVEADSGAIGGSGSKEFHVLADSGEDEIIYCESC-DYAANVETAVSK 239 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGH 286 F VE P + + E L + + ++G Sbjct: 240 VFHAEKEELKAVELVDTPNVSKIEDVVEYLKVPVERTVKAMMY-RDMGT 287 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 73/185 (39%), Positives = 98/185 (52%), Gaps = 3/185 (1%) Query: 261 DVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 DV K + SARGIEVGHIF GTKYS + ATF G H + MG YG Sbjct: 384 DVKTVKPGHVCEKCGGTLASARGIEVGHIFKLGTKYSEKLEATFIDEKGVTHPIIMGCYG 443 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R +A+ IE ++D GI+WP ++AP+ + +I D E++Y L G D Sbjct: 444 IGVSRTLASAIEQNNDEFGIVWPSAIAPYVVDVIPANMKDAEQVALAEELYNSLLDEGID 503 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 DD E+ G +F ADL+GFP +VI G K ++ VE+K R TG ++S +EVI Sbjct: 504 TILDDRDERPGFKFKDADLIGFPFKVICGKK-AAEGIVELKIRKTGETFEISKDEVIYKV 562 Query: 439 SHRFS 443 Sbjct: 563 RELMK 567 >gi|139439769|ref|ZP_01773160.1| Hypothetical protein COLAER_02191 [Collinsella aerofaciens ATCC 25986] gi|133774919|gb|EBA38739.1| Hypothetical protein COLAER_02191 [Collinsella aerofaciens ATCC 25986] Length = 573 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 108/227 (47%), Positives = 155/227 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK + P L+E+P DAE+ASH+L+LR GMI + + G+YS+LPL +++ + I+R+E Sbjct: 5 MYMSKLYAPTLKEDPADAELASHRLLLRAGMIRKEAAGLYSYLPLAWRSIRKIENIVRDE 64 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P + A+LW ESGR D+YGKE++R DR+ + + GPTHEE +T + R+ Sbjct: 65 MDAAGAQELMMPIMVDAELWRESGRIDAYGKELVRFDDRHGREFVLGPTHEETVTALVRN 124 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP Y IQ KFRDE RPRFG+MR REF+MKDAYSF T E + Y+KM + Sbjct: 125 ELRSYKQLPVNLYHIQDKFRDEFRPRFGLMRGREFIMKDAYSFSATQESLQEEYDKMKQA 184 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 Y I R +K++P+ A+SG IGGD S E++ LAD GE + + Sbjct: 185 YANICERCYIKALPVVADSGEIGGDTSVEYMALADAGEASLVYCDEC 231 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 75/191 (39%), Positives = 110/191 (57%), Gaps = 2/191 (1%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ D P +ARGIEV +F GTKYS M ATF DGK+ + MG Sbjct: 382 EWADLVTVVAGDPCPHCGKPLSAARGIEVSQVFQLGTKYSEAMGATFMDEDGKEKPLIMG 441 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YG+G R +AAV+E +D GI+WP SVAP+++++I + + C CE+I L Sbjct: 442 CYGVGVSRSLAAVVEQHNDEHGIVWPVSVAPYEVAVIPLDPKKEECATVCEQIVDGLCAE 501 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G +FA DL+GFP QV++G + + + VE+K R TG RED++++EV+ Sbjct: 502 GIEVVVDDRDERPGFKFADNDLMGFPYQVVLGKRGLKNGTVELKDRATGEREDVAIDEVV 561 Query: 436 NYASHRFSNNR 446 + R Sbjct: 562 AKVAELVKAAR 572 >gi|39936469|ref|NP_948745.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris CGA009] gi|73919820|sp|Q6N4D3|SYT_RHOPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|39650325|emb|CAE28847.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris CGA009] Length = 658 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 140/443 (31%), Gaps = 38/443 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + G+ W G ++ +R Sbjct: 234 YLHQIEEAEKRDHRKLGRELDLF--HFQEEGPGVVFWHAKGWSLFQSLVGYMRRRL-AGD 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-----KAMIYGPTHEEVMTDIFRS 120 E++ P + LW SG ++ Y + M D + P + IF+ Sbjct: 291 YDEVNAPQILDKVLWETSGHWEWYRENMFAAQSAGDDAEDKRWFALKPMNCPGHVQIFKH 350 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + + R E G+MR R F DA+ F + ++ + Sbjct: 351 GLKSYRDLPLRLAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEAQLAEECIKINDL 410 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + ++ + P + E A+ + + N Sbjct: 411 ILSTYSDFGFEGELTVKLSTRPEKRVGTDEMWDHAER-----VMATVLSEIKAKGGNRIK 465 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 +I A Y + L D++ + + ++ FG Sbjct: 466 TEI------NPGEGAFYGPKFEY---VLRDAIGRDWQCGTTQVDFNLPERFG-------- 508 Query: 300 ATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + ADG V + G+M ++ + G +W V ++ Sbjct: 509 AFYIDADGAKKAPVMVHRAICGSMERFTGILIEHYAGNFPLWLAPVQVVVTTIT------ 562 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D +K+ A L K G D E+I + L P ++VG K V + Sbjct: 563 SEGDDYAKKVLAALRKAGLRADIDLRNEKINFKVREHSLAKVPALLVVGKKEAESHSVSV 622 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + ++ M +E I Sbjct: 623 RRLGSDGQKVMPTDEAIAALVDE 645 >gi|187250976|ref|YP_001875458.1| threonyl-tRNA synthetase [Elusimicrobium minutum Pei191] gi|186971136|gb|ACC98121.1| Threonyl-tRNA synthetase [Elusimicrobium minutum Pei191] Length = 583 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 73/450 (16%), Positives = 158/450 (35%), Gaps = 35/450 (7%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + ++Y + RD +L L + + G+ P G V IR+E Sbjct: 164 KLNEYIKQQEEAAKRDHRKLGIELDLFS-ISEDIGPGLILMHPKGGMLRKVVEDWIRDEN 222 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G + P + LW +SG + Y + M + + +D+ P + I+ SH Sbjct: 223 IKHGYDLVYSPHIARLHLWQKSGHANFYSENMFQPIEVDDQQYQLKPMNCPFHIAIYESH 282 Query: 122 IKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR+LP ++ +R E G++R R F DA+ F + + F Sbjct: 283 LRSYRDLPVRLAELGTVYRYERSGVVHGLLRVRGFTQDDAHIFCTPEQMNGE-IEDCFNF 341 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + + G + + + +T K + + + Sbjct: 342 AMLVMKTFGFEKFSVELST-------------WDETKPENYTGGKKDWEEAQNALESVLK 388 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++ A Y D+ K+ D++ ++S + F K+ Sbjct: 389 KNNVPFTVHAGEAAFYGPKIDI---KVMDAIGRYWQLSTIQFD----FNLPQKF----EL 437 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +G+ + + +G++ V+ + G +W V ++L Sbjct: 438 EYVSPEGRKRPLMVHRALLGSIERFLGVLIEHYAGLFPLWLAPVQVKLLTLT------DD 491 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D + + ++ G D E++G + A + P +++G+K + + ++ Sbjct: 492 QFDFAKDVVKQMKLAGLRAELDSRPEKLGLKIREAHVEKIPYSIVIGAKEAENKTLTLRL 551 Query: 421 RLTGIREDMSLEEVINYASHRFSNN--RPV 448 R E +S+ +VI +P+ Sbjct: 552 RSGKNVEGLSVGDVIAKLKEEADTKSLKPL 581 >gi|298528346|ref|ZP_07015750.1| prolyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1] gi|298511998|gb|EFI35900.1| prolyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1] Length = 577 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 125/237 (52%), Positives = 164/237 (69%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+P L+E P +AE+ SHKLMLR GMI + + GIY++LP G +AL ++ +IR E Sbjct: 1 MRWSRYFMPTLKEEPAEAEVVSHKLMLRAGMIRKLTAGIYTYLPAGWRALQKISEVIRGE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR AIE+ +P +Q DLW E+GR+++YGKE+LR DR+D+ GPTHEEV+TD+ R Sbjct: 61 MNRFYAIELLMPAVQPGDLWKETGRWEAYGKELLRFRDRHDRDYCIGPTHEEVITDLIRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD G+ SY M + Sbjct: 121 EVSSYRQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFDKDEAGAAQSYEWMRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y+ IF +LGL+ + A+SG IGG +S EF+VLADTGE + DF E Sbjct: 181 YVSIFEKLGLQFRGVEADSGAIGGSVSQEFMVLADTGEDVIATCTHC-DFAANLEKA 236 Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 111/210 (52%), Gaps = 2/210 (0%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPM 298 D L + + A A D+ + D P + +GIEVGHIF G KYS M Sbjct: 362 DDAHLRHVDLRRDAQVNAYHDLRSITREDPCPRCQGGIRMTKGIEVGHIFMLGAKYSQSM 421 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 +A + G + + MG YGIG RV+AA IE +HD GII+ ++APF++++I + D Sbjct: 422 NAAYLDEHGAEKPLIMGCYGIGVGRVLAACIEQNHDENGIIFTPAIAPFEVTIIALNPKD 481 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 ++ R+ E +Y L DV DD E+ G +F DL+G PLQVIVG+K + + +E+ Sbjct: 482 EMVRNHSESLYNELCSQNVDVLLDDRDERPGFKFKDCDLVGSPLQVIVGAKGIKNGVLEV 541 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNNRPV 448 K R +G R ++ LE+ + R Sbjct: 542 KERHSGHRHELPLEDFGRHFQEVRRKVREH 571 >gi|15807075|ref|NP_295804.1| threonyl-tRNA synthetase [Deinococcus radiodurans R1] gi|22654147|sp|Q9RSP3|SYT_DEIRA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|6459875|gb|AAF11630.1|AE002044_3 threonyl-tRNA synthetase [Deinococcus radiodurans R1] Length = 649 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 76/448 (16%), Positives = 148/448 (33%), Gaps = 42/448 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +Y + + RD +L L T I KG+ WLP G + + ++E+Q + Sbjct: 236 EYLFQLEEAKRRDHRKLGKELELFT--IDPLVGKGLPLWLPNGTVLREELTNFMKEQQFQ 293 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + DL+ SG Y Y + +++ + P + I+ S + Sbjct: 294 RGYQGVVTPNIGNLDLYRTSGHYPYYSESQFNPIQVDEEEYMLKPMNCPHHVRIYASKPR 353 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + +R E G+ R R F DA+ F + + + + + Sbjct: 354 SYRDLPVRLAEFGTVYRYEQSGELNGLTRVRGFTQDDAHIFCRPDQLKRE-FLDVLDLTV 412 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + G+ + R + + D + + +++ Sbjct: 413 LVLKTFGMTDVRFR--------------VGVRDPESDKYVGDEQNWALAERQIIEAVEEV 458 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 +I A Y D + D L ++ ++ ++ Sbjct: 459 GLPYTIEPGDAAFYGPKLDF---VVKDVLGREWQLGTIQVDYNLP--------ERFDISY 507 Query: 303 KGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG++H M R +IE + Sbjct: 508 TGEDGQEHRPIMIHRAPFGSIERFTGILIEHYAGDFPLWLAPRQVMIIPIA-------DR 560 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 E++ L + G DD ++ ++ A+L P+ +IVG K +V ++ Sbjct: 561 HNAYAEELREELHRAGLRAEVDDSSNRMQAKVRDAELHKIPVMLIVGDKEQEAREVSVRE 620 Query: 421 R---LTGIREDMSLEEVINYASHRFSNN 445 R T R+ + +E+ R N Sbjct: 621 RTGEGTKERKGVKFDELKAELLERRKNR 648 >gi|229104381|ref|ZP_04235050.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-28] gi|228679079|gb|EEL33287.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-28] Length = 566 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 121/267 (45%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL+D GE + S ++ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SNYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ASYTKSDEAEKALEKVATPDQKAIEEV 266 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQALI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|94676512|ref|YP_589036.1| prolyl-tRNA synthetase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|114152171|sp|Q1LSM8|SYP_BAUCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|94219662|gb|ABF13821.1| prolyl-tRNA synthetase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 557 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 121/253 (47%), Positives = 171/253 (67%), Gaps = 3/253 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L ++E P DAE+ SH+LMLR G+I Q + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTIKEIPLDAEVISHQLMLRAGIIRQLASGLYTWLPTGLRILRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q A+LW+ESGR+ YG E+LR DR+ + + GPTHEEV+TD+ R+ Sbjct: 61 MNNIGAIEVSMPIVQPANLWLESGRWGQYGPELLRFTDRSTRQFLLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP +QI+ KFRDE+RPR+GVMRSREF+MKDAYSF + + + +Y+ M+ + Sbjct: 121 EVKSYKQLPLNLFQIKTKFRDEVRPRYGVMRSREFIMKDAYSFHTSQQSLQATYDLMYYT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ---VFCSKDFMDFPIPSENT 237 Y IF+R+GL ++A+ G IGG LSHEF+ L E Q + S + +PSEN Sbjct: 181 YNTIFNRIGLDVRTVQADPGSIGGHLSHEFLALVSNYEDQMLLIDASHKATERNLPSENL 240 Query: 238 DFDDIISLNSIVE 250 D + ++ E Sbjct: 241 QLVDAPGIYTLTE 253 Score = 115 bits (289), Expect = 1e-23, Method: Composition-based stats. Identities = 63/171 (36%), Positives = 103/171 (60%), Gaps = 1/171 (0%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 + IEVGHIF G+KYS M AT +G DG + + MG YGIG RVVAA I+ +D Sbjct: 387 RLHRTNWIEVGHIFQLGSKYSKVMKATVQGEDGNNMIMTMGCYGIGITRVVAAAIDKYND 446 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 +G++ P S+APF++++I I H + + E++Y +LS DV DD E+ G FA Sbjct: 447 KQGLLLPVSIAPFQVAIIPINLHKSLLVQTVAEQLYNQLSIRKIDVLLDDRKERPGVMFA 506 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +L+G P +I+G + ++ K+E K+R G ++ M+L ++++ + ++ Sbjct: 507 DIELIGIPHIIIIGDRNLAVQKIEYKNRSNGEKKLMNLSIIVDWIVAKLNS 557 >gi|282934500|ref|ZP_06339755.1| threonine--tRNA ligase [Lactobacillus jensenii 208-1] gi|281301447|gb|EFA93736.1| threonine--tRNA ligase [Lactobacillus jensenii 208-1] Length = 644 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 74/434 (17%), Positives = 153/434 (35%), Gaps = 36/434 (8%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L L + + G+ W+P G + I +++ G + P L Sbjct: 239 RDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRVIERYIIDKELADGYQHVYTPVL 296 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y ++M D D M P + +++ HI+SYR LP Sbjct: 297 MNLDAYKTSGHWAHYREDMFPPMDMGDGEMLELRPMNCPSHIQVYKHHIRSYRELPIRIA 356 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + + K+ + ++ + Sbjct: 357 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALEQVQEE-FAKILKLIMDVYKDFDITD 415 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + F + + + DD+ E Sbjct: 416 YYFRLS-------------YRDPKNTDKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGE 462 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ ++ G DG++H Sbjct: 463 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERFD----LSYVGQDGEEHRP 511 Query: 313 -QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + +G M A + + G W + I + + +K+ Sbjct: 512 VMIHRGIVGTMERFIAYLTEIYKGAFPTWLA-----PEQVEIIPVNLDAHGEYAKKVRDE 566 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L K G D E++G + + P +++G ++ + V ++ T +E MSL Sbjct: 567 LLKHGFRAEVDFRNEKMGYKIRESQTQKVPYTLVLGDDEMNSNAVNVRPYGTEKQESMSL 626 Query: 432 EEVINYASHRFSNN 445 ++ I+ + Sbjct: 627 DKFIDELQADVDSY 640 >gi|224531616|ref|ZP_03672248.1| threonyl-tRNA synthetase [Borrelia valaisiana VS116] gi|224511081|gb|EEF81487.1| threonyl-tRNA synthetase [Borrelia valaisiana VS116] Length = 581 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 71/443 (16%), Positives = 153/443 (34%), Gaps = 37/443 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L + +E RD +L L + + G+ + P G K + REE ++ Sbjct: 172 RSYLNLREEIKKRDHRKLGKELDLFSIH-EEVGPGLVFFHPNGAKIRSLIEDFWREEHSK 230 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + LW SG D Y M + + P + I+ + Sbjct: 231 NGYDILFTPHVGKSWLWQTSGHLDFYKDSMFEKIEMDKSDYYLKPMNCPFHIAIYNTGKH 290 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LPF + ++ +R E G+MR+R F DA+ + ++ + Sbjct: 291 SYRDLPFRWAELGTVYRYEKIGALHGMMRARGFTQDDAHIICTHSQVVDE-IKEVLRFAI 349 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++++ G S+ + P + + + + D Sbjct: 350 YMWNKFGFNSLKAYLSTKP-----------------DKSVGNDADWEMSLKVLEETLSDF 392 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I + A Y D+ K+ DSL ++S + F ++++ +A Sbjct: 393 EVPYEIDKGGGAFYGPKIDL---KIVDSLEREWQMSTIQFD----FNLPERFNMTYTA-- 443 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ ++ + G +W I + Sbjct: 444 -DDGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPLW------LSPVQAVIIPVNNTVE 496 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D K+ + G + D+ ++ ++ P I+G + V++ ++ I+ R Sbjct: 497 DYAIKVLNKFKNEGIRIKLDNSSSRMNAKIREYQAKKIPYMFIIGEREVAEERISIRTRT 556 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L E + + + N Sbjct: 557 NEQINGIELNEALKFILLKIRNK 579 >gi|220931621|ref|YP_002508529.1| prolyl-tRNA synthetase [Halothermothrix orenii H 168] gi|254782904|sp|B8CW65|SYP_HALOH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|219992931|gb|ACL69534.1| prolyl-tRNA synthetase [Halothermothrix orenii H 168] Length = 568 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 115/277 (41%), Positives = 171/277 (61%), Gaps = 5/277 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S ++P L+E P++AE+ SH+LMLR G+I + G+YS+LPLG + + + IIR+ Sbjct: 1 MRMSNLYIPTLKEVPKEAEVVSHQLMLRAGLIRNLTAGVYSFLPLGYRVIKKIEGIIRKV 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + +GA E+ +P + ++DLW ESGR++ +G M++ DR + GPTHEEV+TD+ R Sbjct: 61 MDESGAQEVLMPVIHTSDLWKESGRWEKFGPLMIKFEDRKGREYCLGPTHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY++LP YQIQ K RDE+RPRFG+MRSREF+MKDAYSFD EG SY M+ + Sbjct: 121 EIRSYKDLPLNLYQIQTKVRDEIRPRFGLMRSREFIMKDAYSFDRDYEGLDKSYQVMYGA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F+R GL+ + A++G +GG SHEF+VLA++GE + D+ E + Sbjct: 181 YTEVFNRCGLEVRAVEADTGAMGGKDSHEFMVLAESGEDDIAFCNRC-DYAANVERAEAR 239 Query: 241 DIISLNS----IVEQWTAPYAATSDVHNEKLFDSLPE 273 + S + +E+ P D E L + Sbjct: 240 YVKSEKNEEIKPLEKVETPGKKKIDELVEFLKMPSEK 276 Score = 171 bits (434), Expect = 2e-40, Method: Composition-based stats. Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 3/188 (1%) Query: 261 DVHNEKLFDSLPENKRVSAR--GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ K D P + GIEVGHIF GTKYS M AT+ +GK+ + MGSYG Sbjct: 382 DIRKVKEGDQCPHCEGTIEIKSGIEVGHIFKLGTKYSESMGATYLDENGKEQPIVMGSYG 441 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R+VAA IE +HD GIIWP ++AP+++ ++ + D+ E++Y L + Sbjct: 442 IGVTRLVAAAIEQNHDEHGIIWPKAIAPYQVIILPLGKGDE-VNKRAEELYLELKDNNIE 500 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G +F ADL+G PL++ +GS+ + +E + R TG ++S+E+ I Sbjct: 501 VLLDDRNERAGVKFNDADLIGIPLRLTIGSRSLDKGVIEARVRGTGQDYEISVEDAIKDI 560 Query: 439 SHRFSNNR 446 N + Sbjct: 561 KKLLENVK 568 >gi|282864200|ref|ZP_06273256.1| threonyl-tRNA synthetase [Streptomyces sp. ACTE] gi|282560687|gb|EFB66233.1| threonyl-tRNA synthetase [Streptomyces sp. ACTE] Length = 658 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 70/442 (15%), Positives = 136/442 (30%), Gaps = 38/442 (8%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD ++L L + + G+ + P G + R G + Sbjct: 252 LEEAAKRDHRKLGNELDLFS-FPDEIGPGLAVFHPKGGVIRRAMEDYSRRRHEEEGYEFV 310 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNL 128 P L+ +SG D Y M +D P + + IF + +SYR L Sbjct: 311 YSPHATKGKLFEKSGHLDWYADGMYPPMQLDDGVDYYLKPMNCPMHNLIFDARGRSYREL 370 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P ++ +R E G+ RSR F DA+ + + ++ ++ L + Sbjct: 371 PLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTREQMAEEL-DRTLTFVLNLLRD 429 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 GL + + + S + + + + Sbjct: 430 YGLTDFYLELST----------------KDPEKFVGSDEAWEEATETLRQVAEKQGLPLV 473 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 A Y + + D++ ++S ++ F ++ + G DG Sbjct: 474 PDPGGAAFYGPKI---SVQCKDAIGRTWQMSTVQLD----FNLPERFD----LEYTGPDG 522 Query: 308 KDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + G++ AV+ + +P +AP + I I + Sbjct: 523 TKQRPVMIHRALFGSIERFFAVLL---EHYAGAFPVWLAPVQAVGIPIG---DTHIPYLQ 576 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + A K G V D +++ + P VIVG ++ V +HR Sbjct: 577 EFAAEARKKGLRVEVDASSDRMQKKIRNHQKAKVPFMVIVGDDDMNAGTVSFRHRDGSQE 636 Query: 427 EDMSLEEVINYASHRFSNNRPV 448 + +E I V Sbjct: 637 NGIPRDEAIAKLVDLVERRVQV 658 >gi|260662523|ref|ZP_05863418.1| threonyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN] gi|260553214|gb|EEX26157.1| threonyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN] Length = 627 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 73/440 (16%), Positives = 150/440 (34%), Gaps = 36/440 (8%) Query: 10 ILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + RD + ++L L + + G+ W+P G + + +++ G Sbjct: 216 RQEARERDHRVIGNQLDLF--FVDPKVGAGLPYWMPKGSTIRRTIERYVIDKEVGDGYEH 273 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRN 127 + P L + D + SG +D Y ++M D D + P + I++ HI+SYR Sbjct: 274 VYTPVLMNLDAYKTSGHWDHYREDMFPPMDMGDGELLELRPMNCPSHIQIYKHHIRSYRE 333 Query: 128 LPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ + R E G+ R RE + D ++F + + K+ + ++ Sbjct: 334 LPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIQDE-FAKILKLIMDVYK 392 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 + R + F + + + D + Sbjct: 393 DFNINDYTFRLS-------------YRDPKNTEKYFANDEMWERSQSMLKAAMDSMGLDY 439 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y D+ + +L ++ +S ++ F K+ L + G D Sbjct: 440 YEAEGEAAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPEKFDLH----YVGED 488 Query: 307 GKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 GK H + +G M A + + G W + I D+ D Sbjct: 489 GKQHRPVMIHRGVVGTMERFVAYLTEIYKGAFPTWLA-----PNQVNIIPVSDEKHGDYA 543 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 + + D E++G + + P ++VG V++ V ++ Sbjct: 544 DDLAREFRAAQLRTVVDHRSEKMGYKIRESQTQKVPYTLVVGEDEVANGTVSVRKYGEKD 603 Query: 426 REDMSLEEVINYASHRFSNN 445 + MS ++ ++ H + Sbjct: 604 QVSMSKQDFLDLILHDVATY 623 >gi|303278011|ref|XP_003058299.1| predicted protein [Micromonas pusilla CCMP1545] gi|226460956|gb|EEH58250.1| predicted protein [Micromonas pusilla CCMP1545] Length = 698 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 72/429 (16%), Positives = 144/429 (33%), Gaps = 38/429 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + G+ W P G + + ++ G + Sbjct: 295 EAARRDHRKIGKELNLFSIQQEEVGGGLVFWHPKGALMRNIIENFWKDIHMARGYDLLYT 354 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + DLW SG D Y + M + D D+ P + +++ SYR+LP Sbjct: 355 PHVGKLDLWKTSGHADFYAENMYKPMDVEDETYQLKPMNCPFHVAVYKDGYFSYRDLPIR 414 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + ++ +R E G+ R R F DA+ F L + + L + + Sbjct: 415 WAEMGTVYRYERSGTMHGLFRVRGFTQDDAHIFCLPDQIADE-----IKGVLDLTEDILS 469 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 EF V T + + D + + E Sbjct: 470 TF-------------GFTEFEVNLSTKPEKSVGGPEIWDKAEGALKEALAVKGWDYEVDE 516 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG-KD 309 A Y D+ K+ D++ + S ++ F ++ T+ + K Sbjct: 517 GGGAFYGPKIDI---KILDAIGRKWQCSTVQLD----FNLPERF----ELTYIDEENSKR 565 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + + G++ ++ + +P +AP ++ L+ + E+ Sbjct: 566 RPIMIHRAIFGSLERFYGILT---ENYAGAFPLWIAPTQVRLLPVT---DAVTPYVEETV 619 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 AR+ G V E++ A+ P+ +VG + D + ++ G + Sbjct: 620 ARMKAAGVRVDV-TSKERLAKLVRNAEKQKVPVMCVVGEQEAKDGTLAVRTYADGDVGVI 678 Query: 430 SLEEVINYA 438 +++EVI Sbjct: 679 TVDEVIARL 687 >gi|227514102|ref|ZP_03944151.1| threonine--tRNA ligase [Lactobacillus fermentum ATCC 14931] gi|227087473|gb|EEI22785.1| threonine--tRNA ligase [Lactobacillus fermentum ATCC 14931] Length = 634 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 73/440 (16%), Positives = 150/440 (34%), Gaps = 36/440 (8%) Query: 10 ILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + RD + ++L L + + G+ W+P G + + +++ G Sbjct: 223 RQEARERDHRVIGNQLDLF--FVDPKVGAGLPYWMPKGSTIRRTIERYVIDKEVGDGYEH 280 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRN 127 + P L + D + SG +D Y ++M D D + P + I++ HI+SYR Sbjct: 281 VYTPVLMNLDAYKTSGHWDHYREDMFPPMDMGDGELLELRPMNCPSHIQIYKHHIRSYRE 340 Query: 128 LPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ + R E G+ R RE + D ++F + + K+ + ++ Sbjct: 341 LPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIQDE-FAKILKLIMDVYK 399 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 + R + F + + + D + Sbjct: 400 DFNINDYTFRLS-------------YRDPKNTEKYFANDEMWERSQSMLKAAMDSMGLDY 446 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y D+ + +L ++ +S ++ F K+ L + G D Sbjct: 447 YEAEGEAAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPEKFDLH----YVGED 495 Query: 307 GKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 GK H + +G M A + + G W + I D+ D Sbjct: 496 GKQHRPVMIHRGVVGTMERFVAYLTEIYKGAFPTWLA-----PNQVNIIPVSDEKHGDYA 550 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 + + D E++G + + P ++VG V++ V ++ Sbjct: 551 DDLAREFRAAQLRTVVDHRSEKMGYKIRESQTQKVPYTLVVGEDEVANGTVSVRKYGEKD 610 Query: 426 REDMSLEEVINYASHRFSNN 445 + MS ++ ++ H + Sbjct: 611 QVSMSKQDFLDLILHDVATY 630 >gi|20429011|emb|CAC79651.1| threonyl-tRNA synthetase [Oryza sativa Japonica Group] Length = 531 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 77/446 (17%), Positives = 158/446 (35%), Gaps = 38/446 (8%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R +Y + + RD + L HQ S G +LP G + + +R++ Sbjct: 123 RLKEYKHLLEEAKKRDHRLLGQTQDLF--FFHQLSPGSCFFLPHGAIIYNKLMDFLRQQY 180 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G E+ P + + LW SG +Y + M + + + P + +F Sbjct: 181 RDRGYQEVLSPNIYNMQLWETSGHAANYKENMF-VFEIEKQEFGLKPMNCPGHCLMFEHR 239 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP + R+EL G+ R R F DA+ F K + Sbjct: 240 VRSYRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCR-ESQIKDEVKAVLDF 298 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++ G K + + P E + + Sbjct: 299 INYVYEIFGFKYE-LELSTRPEKYLGDIE-----------------TWNKAEQQLTEALN 340 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I E A Y D+ +FD+L + + ++ F ++ L SA Sbjct: 341 EFGKPWQINEGDGAFYGPKIDIG---VFDALKRKFQCATLQLD----FQLPLRFKLTYSA 393 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + V + +G++ + A++ + WP ++P + + +I ++ Sbjct: 394 E--DEAKLERPVMIHRAILGSVERMFAILL---EHYNGKWPLWLSPRQAIVCSISSNS-- 446 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + +++ R+ + G V D+ I + A L F ++VG++ +V ++ Sbjct: 447 -VEYAKQVRVRIHEAGFHVAIDETDRTIQKKVREAQLAQFKYILVVGAQEAETGQVSVRV 505 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R +S++++I + + Sbjct: 506 RDKAELATVSIDDIITRFKEEVAAYK 531 >gi|150388509|ref|YP_001318558.1| prolyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] gi|166980095|sp|A6TL31|SYP_ALKMQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|149948371|gb|ABR46899.1| prolyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] Length = 570 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 112/242 (46%), Positives = 155/242 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++P L+E P +AE+ SH+L+LR GMI + G+YS+LPLG + L V I+REE Sbjct: 1 MRMSKLYMPTLREVPSEAELPSHQLLLRAGMIRKLVAGVYSYLPLGYRTLKKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E + LQ +LW +GR+ + G EM+RL DR+++ GPTHEEV+TD+ ++ Sbjct: 61 MDRAGAQEALMSALQPKELWEATGRWQAIGPEMMRLKDRHNREFCLGPTHEEVITDLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPRFG+MRSREF+MKDAYSFD EG K SY M+ Sbjct: 121 ELKSYKQLPLNLYQIQTKYRDEKRPRFGLMRSREFIMKDAYSFDKDEEGMKKSYEDMWKG 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y R+F R LK + ++G +G SHEF+ ++ GE+ V + T Sbjct: 181 YERVFDRCELKYKVVEGDAGAMGDSESHEFMAMSQYGESLVAYCDHCDYAATDEKATVVY 240 Query: 241 DI 242 D+ Sbjct: 241 DV 242 Score = 154 bits (389), Expect = 3e-35, Method: Composition-based stats. Identities = 68/187 (36%), Positives = 103/187 (55%), Gaps = 3/187 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 D+ + D P RGIEVG+IF KYS ++ATF +GK+ Y MGS Sbjct: 383 VEDLLLVQEGDLCPTCGETLKLDRGIEVGNIFQLDMKYSKGLNATFLDENGKEQYFYMGS 442 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R +AAVIE HD KGI WP ++AP+++ + + + R+ EKIY++L G Sbjct: 443 YGIGIGRTMAAVIEQYHDEKGIKWPLALAPYQVVVTIVNPNKDEQRELGEKIYSKLLSKG 502 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E G +F A+L+G P++V+ G K ++ VE R T ++++ +EV+ Sbjct: 503 VEVLLDDRKESPGVKFKDAELIGIPIRVVAG-KNAGENIVEFALRATDEKKEVEADEVVE 561 Query: 437 YASHRFS 443 + Sbjct: 562 MVMDQLK 568 >gi|311744140|ref|ZP_07717946.1| proline--tRNA ligase [Aeromicrobium marinum DSM 15272] gi|311313270|gb|EFQ83181.1| proline--tRNA ligase [Aeromicrobium marinum DSM 15272] Length = 593 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 110/280 (39%), Positives = 158/280 (56%), Gaps = 2/280 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ FL L+++P DAE+ SH+L++R G + + + GIYSWLPLG K L V AI+REE Sbjct: 1 MRMSRLFLRTLRDDPADAEVPSHRLLVRAGYVRRVAPGIYSWLPLGLKVLARVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ P L + + S R+ YG + RL DR ++ GPTHEE+ T + + Sbjct: 61 MEAIGAQEVRFPALLPREPYEASNRWTEYGPNLFRLTDRKGADLLLGPTHEELFTLLVKD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP + YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G + SY + Sbjct: 121 LYGSYKDLPLSIYQIQTKYRDEARPRAGILRGREFIMKDSYSFDVDDAGLEASYQAHRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+RIF RLG + + + A+SG +GG S EF+ ++DTGE S + + T Sbjct: 181 YVRIFDRLGFEYVVVHADSGAMGGSASEEFLAVSDTGEDTFVRSPGGYAANVEAVTTVAP 240 Query: 241 DIISLN--SIVEQWTAPYAATSDVHNEKLFDSLPENKRVS 278 D + + P T D L + P + R Sbjct: 241 DPVPFDGLPAAHAEQTPDTPTIDTLVAHLQERFPRDDRAW 280 Score = 156 bits (394), Expect = 7e-36, Method: Composition-based stats. Identities = 73/195 (37%), Positives = 104/195 (53%), Gaps = 6/195 (3%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ ARGIE+GHIF G KY+ + +GK V MG Sbjct: 397 GTIEAAEVRAGDPAPDGSGPLELARGIEMGHIFQLGRKYAEVLDLKVLDENGKLVTVTMG 456 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R VAAV+ESSHD GI+WP ++AP+ + LI D+ ++Y L Sbjct: 457 SYGVGVSRAVAAVVESSHDDLGIVWPRALAPYDVHLIAAG-KDEAVHLGAARLYDELRAA 515 Query: 376 GCDVFWDDM--GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G DV +DD +G +F A+LLG P V+VG K +D VE+K R TG R D+ +++ Sbjct: 516 GLDVLFDDRPGKISLGVKFKDAELLGMPTIVVVG-KGFADGVVEVKDRATGDRSDVPVDD 574 Query: 434 VINYASHRFSNNRPV 448 ++ S RP+ Sbjct: 575 LVELLSASVREGRPL 589 >gi|184156306|ref|YP_001844646.1| threonyl-tRNA synthase [Lactobacillus fermentum IFO 3956] gi|183227650|dbj|BAG28166.1| threonyl-tRNA synthase [Lactobacillus fermentum IFO 3956] Length = 634 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 73/440 (16%), Positives = 150/440 (34%), Gaps = 36/440 (8%) Query: 10 ILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + RD + ++L L + + G+ W+P G + + +++ G Sbjct: 223 RQEARERDHRVIGNQLDLF--FVDPKVGAGLPYWMPKGSTIRRTIERYVIDKEVGDGYEH 280 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRN 127 + P L + D + SG +D Y ++M D D + P + I++ HI+SYR Sbjct: 281 VYTPVLMNLDAYKTSGHWDHYREDMFPPMDMGDGELLELRPMNCPSHIQIYKHHIRSYRE 340 Query: 128 LPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ + R E G+ R RE + D ++F + + K+ + ++ Sbjct: 341 LPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIQDE-FAKILKLIMDVYK 399 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 + R + F + + + D + Sbjct: 400 DFNINDYTFRLS-------------YRDPKNTEKYFANDEMWERSQSMLKAAMDSMGLDY 446 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y D+ + +L ++ +S ++ F K+ L + G D Sbjct: 447 YEAEGEAAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPEKFDLH----YVGED 495 Query: 307 GKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 GK H + +G M A + + G W + I D+ D Sbjct: 496 GKQHRPVMIHRGVVGTMERFVAYLTEIYKGAFPTWLA-----PNQVNIIPVSDEKHGDYA 550 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 + + D E++G + + P ++VG V++ V ++ Sbjct: 551 DDLAREFRAAQLRTVVDHRSEKMGYKIRESQTQKVPYTLVVGEDEVANGTVSVRKYGEKD 610 Query: 426 REDMSLEEVINYASHRFSNN 445 + MS ++ ++ H + Sbjct: 611 QVSMSKQDFLDLILHDVATY 630 >gi|157803434|ref|YP_001491983.1| threonyl-tRNA synthetase [Rickettsia canadensis str. McKiel] gi|166225493|sp|A8EXW5|SYT_RICCK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157784697|gb|ABV73198.1| threonyl-tRNA synthetase [Rickettsia canadensis str. McKiel] Length = 635 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 151/442 (34%), Gaps = 41/442 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + ++G+ W G + V IR++ + G Sbjct: 231 YLFMLEEAEKRDHRKLGRELDLF--HFQEEAQGMVFWHDKGWSIYNIVEQYIRKKIRKNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L LW SG ++ + M + ++K + P + IF+ IKSY Sbjct: 289 YTEVKTPVLVDKRLWEASGHWEKFRDNMF-ALEADNKILALKPMNCPCHVQIFKQGIKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + L R+E G+MR R + DA+ F + + + + + Sbjct: 348 RDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETVSF-CKLLTEV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ P S E D + + Sbjct: 407 YKDFGFTDIKVKFSDRPEIRAGSDE-----------------VWDKAENALKEAVEKAGF 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 ++ A Y + L D++ + ++ + A++ Sbjct: 450 TYTLNPGEGAFYGPKLEF---VLTDAIGRQWQCGTLQMDFVLLEQLD--------ASYVA 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 A G+ + +G++ ++ + G +W + I D Sbjct: 499 ASGEKKRPVMLHRAILGSLERFIGILIEEYAGCFPLW------LAPVQVAIATITSDLND 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + L G + ++I + PL I+G K + +V I+ T Sbjct: 553 YALAVQKALIDNGVRTDINISPDKINYKIREFSNHKVPLIAIIGKKEKENKQVTIRRLGT 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 ++ +S++++I S S Sbjct: 613 TDQQVLSVKQLITLISEENSKY 634 >gi|320120274|gb|EFE27922.2| proline--tRNA ligase [Filifactor alocis ATCC 35896] Length = 596 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 107/254 (42%), Positives = 167/254 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ +LP L+E P DAE+ SH+L+LR G+I + G+YS+LPLG++ L + +IREE Sbjct: 24 MKMSRMYLPTLREVPSDAEVISHQLLLRAGLIRKLVSGVYSYLPLGKRVLAKIERVIREE 83 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + + E+ + +Q ++LW ESGR++++G EM RL DRN++ GPTHEE+ T + R Sbjct: 84 MDAANSQEVLMSAIQPSELWKESGRWENFGPEMFRLYDRNEREFCLGPTHEEIFTSLVRD 143 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP + YQIQ K+RDE RPRFGV+R+REF+MKDAY+FD P+G K SY +M+ + Sbjct: 144 ELKSYKQLPLSLYQIQTKYRDEKRPRFGVIRAREFIMKDAYTFDRDPDGMKQSYQEMWEA 203 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF RL +K + +SG +GG SHEF +A++GE+ V ++ + Sbjct: 204 YTKIFDRLHMKYRVVEGDSGAMGGSDSHEFTAMAESGESTVMYAEGCDYAATDEKAECIF 263 Query: 241 DIISLNSIVEQWTA 254 ++ ++ ++ Sbjct: 264 ELPVQDTEKKELEK 277 Score = 157 bits (397), Expect = 4e-36, Method: Composition-based stats. Identities = 70/189 (37%), Positives = 108/189 (57%), Gaps = 4/189 (2%) Query: 258 ATSDVHNEKLFDSLPENKR---VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ + D P+++R S RGIEVG+IF GTKYS ++ T+ DGK V M Sbjct: 405 VVDDLILTQEGDICPQDRRLRLKSDRGIEVGNIFQLGTKYSDSLNLTYLDQDGKSKKVWM 464 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 GS+GIG R +AA+IE ++D KGIIWP VAP+ I + + A + E++Y +K Sbjct: 465 GSHGIGVSRTMAAIIEQNYDEKGIIWPLVVAPYHILITVVNAKKEDQMQLGEQLYQEYTK 524 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +G +V +DD E+ G +F ADL+G P+++ VG + + VE R G +E++ + E+ Sbjct: 525 LGYEVLFDDRNERAGVKFNDADLIGIPIRINVGRR-AEEGIVEFSLRRGGEKEEIPVSEI 583 Query: 435 INYASHRFS 443 F+ Sbjct: 584 AQKVKDEFA 592 >gi|104774352|ref|YP_619332.1| threonyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423433|emb|CAI98306.1| Threonyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 643 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 76/433 (17%), Positives = 153/433 (35%), Gaps = 34/433 (7%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L L + + G+ W+P G + I +++ G + P L Sbjct: 238 RDHRTIGRDLDLF--FVDPKAGAGLPYWMPKGATIRRIIERYIVDKEVAAGYQHVYTPVL 295 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y ++M D + M P + I++ HI+SYR LP Sbjct: 296 MNLDAYKTSGHWAHYREDMFPPMDMGEGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIA 355 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + + + + ++H + Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEE-FARTLQIIMDVYHDFDIND 414 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + F + + + DD+ E Sbjct: 415 YYFRLS-------------YRDPKNTDKYFANDEMWERSQSMLKAAMDDMGLDYVEAEGE 461 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ ++ GADG++H Sbjct: 462 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----ELSYIGADGEEHRP 510 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 M G + + I + +P +AP + +I + D +K+ L Sbjct: 511 VMIHR--GIVGTMERFIAYLTEIYKGAFPTWLAPVQAEIIPVNL--DAHSDYAKKVRDEL 566 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G D E++G + + P +++G ++ V ++ T + SL Sbjct: 567 VAKGFRAEIDFRNEKLGYKIRESQTQKVPYTLVLGDDEMNAGTVNVRPYGTEEQNSESLA 626 Query: 433 EVINYASHRFSNN 445 E + S +N Sbjct: 627 EFMGKLSKDVANY 639 >gi|110679173|ref|YP_682180.1| threonyl-tRNA synthetase [Roseobacter denitrificans OCh 114] gi|123362019|sp|Q168U9|SYT_ROSDO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|109455289|gb|ABG31494.1| threonyl-tRNA synthetase [Roseobacter denitrificans OCh 114] Length = 648 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 81/442 (18%), Positives = 143/442 (32%), Gaps = 45/442 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD ++ L + + + G W P G + +R +Q Sbjct: 234 KAHLTMLEEAAKRDHRKLGREMDLF--HMQEEAPGQVFWHPNGWSIYTTLQDYMRRKQRA 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIY-----GPTHEEVMTDIF 118 G E++ P + LW SG +D Y + M + D A P + IF Sbjct: 292 AGYQEVNTPQVVDRKLWEASGHWDKYQEHMFIVEVDEDHAREKAVNALKPMNCPCHVQIF 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F D ++F + + Sbjct: 352 NQGLKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHTFCR-EDQIEAECAAF 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 ++ LG + + + P S E D + Sbjct: 411 ITYLSSVYQDLGFEKFEIMFATRPEKRVGSEE-----------------SWDHVEAALEN 453 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 ++ E A Y D KL D++ + ++ Sbjct: 454 AIKATGHPYTLDEGEGAFYGPKLDF---KLTDAIGREWQCGTFQVDPNLP--------ER 502 Query: 298 MSATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + AT+ G DG H + +G+ ++ + GK W S+I Sbjct: 503 LDATYIGQDGAKHRPYMLHRACLGSFERFIGILIENSAGKLPFWLAPRQVVVASII---- 558 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++ +L G D E+I + + P+ + VG++ V + V Sbjct: 559 --SDADDYVLEVVEKLQAAGVRAEADVRNEKINYKVREHSVGKVPVILAVGAREVEEKTV 616 Query: 417 EIKHRLTGIREDMSLEEVINYA 438 ++ +L+ V Sbjct: 617 TLRRLGEKKTSVETLDAVTQAL 638 >gi|289579170|ref|YP_003477797.1| prolyl-tRNA synthetase [Thermoanaerobacter italicus Ab9] gi|289528883|gb|ADD03235.1| prolyl-tRNA synthetase [Thermoanaerobacter italicus Ab9] Length = 570 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 115/255 (45%), Positives = 161/255 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +AEI SH LML+ ++ + + G+Y +LPLGQ+ L V I+REE Sbjct: 1 MRLSQLLVPTLREIPAEAEIPSHILMLKAALMRKLASGVYIYLPLGQRVLRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ + L A+L ESGR+D +G EM +L DRN++ GPTHEEV TD+ R+ Sbjct: 61 MDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFKLKDRNERDFCLGPTHEEVFTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE RPRFGVMRSREF+MKDAYSFD+ EG S+ KM+ + Sbjct: 121 EVKSYRQLPLILYQIQTKFRDERRPRFGVMRSREFIMKDAYSFDVDWEGLDKSFEKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK + + A+SG +GG S EF+V++ GE + + + Sbjct: 181 YCRIFDRCGLKYLVVEADSGAMGGKDSKEFMVISSVGEAVIAYCDNCGYAANEEKAECLI 240 Query: 241 DIISLNSIVEQWTAP 255 + + ++ + Sbjct: 241 NQEIVEEMLPKEKVY 255 Score = 173 bits (439), Expect = 5e-41, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 102/190 (53%), Gaps = 3/190 (1%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P RGIEVGHIF GTKYS + A + +G + + MG Sbjct: 381 VVADIKNVIEGDKCPRCGSPLKIDRGIEVGHIFKLGTKYSDALGAKYVDEEGNEKPIVMG 440 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R VAA+IE +HD KGIIWP SVAP+ + ++ + ++ E IYA L K Sbjct: 441 CYGIGINRTVAAIIEQNHDDKGIIWPMSVAPYHVIIVPVNVSNEAQNGVAEDIYAALQKE 500 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD + G +F ADLLG P+++ VG K V D VEIK R E++ + +V+ Sbjct: 501 GIEVLIDDRDLRAGVKFNDADLLGIPIRITVGKK-VGDGIVEIKLRENEEAEEVKISDVV 559 Query: 436 NYASHRFSNN 445 + Sbjct: 560 EKVKNIIKEK 569 >gi|283769478|ref|ZP_06342374.1| threonine--tRNA ligase [Bulleidia extructa W1219] gi|283103746|gb|EFC05132.1| threonine--tRNA ligase [Bulleidia extructa W1219] Length = 584 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 79/444 (17%), Positives = 159/444 (35%), Gaps = 34/444 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD L + G+ WLP G ++ I E++ Sbjct: 169 EAYLQVLEEAKERDHRKLGKDLKMFL-FSETVGSGLPMWLPNGFTVRRLLSDYIMEKEIA 227 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P++ S L+ SG Y ++M + +R+ + + P + I+++ + Sbjct: 228 LGYEHVLTPSVASTKLYEVSGHLAHYQEDMFPIMERDGDSYVLRPMNCPEHMIIYKASLH 287 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP +I FR E G+ RSR F D++ F L P+ + L Sbjct: 288 SYRDLPVRIAEIAHDFRFEASGALTGIERSRSFTQNDSHIF-LRPDQIAEEIKNVTKLIL 346 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +++ G K R + + F + D ++ Sbjct: 347 DVYNDFGFKDYSFRLSLRDLNNTD-------------KYFGNDDLWTRSENELREVLKEM 393 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ + Sbjct: 394 KVPYYEAEGEAAFYGPKIDV---QVKSALGHDVTLSTIQLDYQLP--------ERFELEY 442 Query: 303 KGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D + V + +G++ A + G +W + + I + + Sbjct: 443 VNKDNQKVRPVVIHRAILGSLDRFVAFLLEETKGVLPLWLA-----PLQVEVIPVNSEAH 497 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D KI L + G DD E++G + A + P+Q++VG++ + + V ++ Sbjct: 498 GDYASKINRALKREGIRSHLDDRNEKLGYRIREAQMNKVPIQIVVGNRDIENETVTVRTY 557 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + S ++ +N + + Sbjct: 558 GSKEEVTHSFKDYLNQLVEQIAQK 581 >gi|229544430|ref|ZP_04433488.1| prolyl-tRNA synthetase [Bacillus coagulans 36D1] gi|229324915|gb|EEN90592.1| prolyl-tRNA synthetase [Bacillus coagulans 36D1] Length = 569 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 114/282 (40%), Positives = 171/282 (60%), Gaps = 1/282 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L++ P +AE+ SH+L+LR G I Q + G+Y++LPL +K L + AIIREE Sbjct: 1 MKQSKLFIPTLRDVPAEAEVKSHQLLLRAGYIRQIASGVYTYLPLAKKVLHKIEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G++E+ +P+LQ A+LW ESGR+ SYG +++RL DR+++ GPTHEEV+T + R+ Sbjct: 61 LEAIGSMELLMPSLQPAELWQESGRWYSYGPDLMRLKDRHERDFALGPTHEEVITSLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP + YQIQ KFRDE RPRFG++R REF+MKDAYSF E +Y M+ + Sbjct: 121 EVKSYKRLPLSLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHANKESLDETYKDMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R L + A+SG IGG + EF+VL++ GE + S D+ E + Sbjct: 181 YTNIFSRCKLDFRAVLADSGAIGGKDTQEFMVLSEIGEDTIAYSDS-SDYAANIEMAEVK 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 + + E+ ++ D L + + + Sbjct: 240 TVYTKPDEAEKPLEKIPTPGQRTIAQIADFLKADPEKCLKTL 281 Score = 163 bits (412), Expect = 6e-38, Method: Composition-based stats. Identities = 70/185 (37%), Positives = 103/185 (55%), Gaps = 4/185 (2%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ N + D P+ K RGIEVGHIF GTKYS M A F +G++ + MG YG Sbjct: 383 DLRNIQEGDPSPDGKGTIRFARGIEVGHIFKLGTKYSEAMHAAFLDENGREQVMLMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R + AV E +D KG++WP ++APF + L+ + D E ++A L K Sbjct: 443 IGVSRTLTAVCEQHNDDKGLVWPVNLAPFDVHLVPVNMKDAQQSALAESLHAELEKQ-FT 501 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G +FA +DL+G P++V VG K ++ VE+K R TG ++ E++ Sbjct: 502 VLMDDRNERPGVKFADSDLIGLPVRVTVGKK-AAEGIVEVKIRKTGEVLEVKKEDLAETI 560 Query: 439 SHRFS 443 S+ + Sbjct: 561 SNILA 565 >gi|195952891|ref|YP_002121181.1| threonyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1] gi|195932503|gb|ACG57203.1| threonyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1] Length = 637 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 79/438 (18%), Positives = 157/438 (35%), Gaps = 38/438 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD +L L T + Q G+ WLP G V ++E+ + Sbjct: 236 EEAKKRDHRRLGKELELFT-IDEQVGPGLIIWLPKGAILRQVVEDYLKEKHRALNYQFVY 294 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + + LW SG Y + M +++ P + I++S I+S++ LP Sbjct: 295 TPHVGKSTLWETSGHLSYYKENMFPGMKIEEESYYVKPMNCPFHMAIYKSKIRSHKELPI 354 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 ++ +R E+ G+MR R F DA+ F E K + + G Sbjct: 355 KIAELGTVYRYEMSGVLHGLMRVRGFTQDDAHIFCK-EEDVKSVIKETLELAFDVLKDFG 413 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + P + E ++++ + + + I Sbjct: 414 FYDYQIFISTKPKDAIGTEENWKISES-----------------ALKESLEALDKTYEID 456 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 E A Y D+ K+ D++ + S + F ++ T+ G D K Sbjct: 457 EGGGAFYGPKIDI---KIKDAIGRFWQCSTIQFD----FNLPERFD----LTYVGEDNKK 505 Query: 310 HYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 H + +G++ V+ + G IW ++P + ++I I D +++ Sbjct: 506 HRPYIIHRALLGSIERFTGVLIEHYAGHLPIW---LSPIQAAIIPIADRH---LDYAKEV 559 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 + L + DD E++ ++ +L P+ ++VG K V + ++ + + Sbjct: 560 FELLKVQNIRTYIDDRPERMNAKIRDNELQKIPILLVVGDKEVQEKTFSVRSKNEEFQGV 619 Query: 429 MSLEEVINYASHRFSNNR 446 M + + I N R Sbjct: 620 MGIYDFIEKLKTAIQNKR 637 >gi|157115843|ref|XP_001658309.1| threonyl-tRNA synthetase [Aedes aegypti] gi|108883479|gb|EAT47704.1| threonyl-tRNA synthetase [Aedes aegypti] Length = 716 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 72/434 (16%), Positives = 151/434 (34%), Gaps = 42/434 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + IR+E + G E+ Sbjct: 311 EEAAKRDHRKLGKEQELF--FFHELSPGSCFFQPKGAHIYNTLMNFIRDEYRKRGFQEVI 368 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + +A LW SG + Y + M + P + +F +S+R LP Sbjct: 369 TPNIYNAKLWQTSGHWQHYAENMFSFESEKET-FALKPMNCPGHCLMFDHRNRSWRELPL 427 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + + + + +L + + Sbjct: 428 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCMPDQIKQEII--GCLDFLAHVYGVF 485 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + + P E + + D Sbjct: 486 GFTFNLVLSTRPEKYLGDIE-----------------VWNEAEKALAESLDKFGQPWKEN 528 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L N + + ++ F ++ + + G+ Sbjct: 529 PGDGAFYGPKIDI---TIMDALKRNHQCATIQLD----FQLPIRF----NLNYIDDSGEK 577 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + +G++ + A++ + WP ++P ++ ++ + D +K+ Sbjct: 578 KRPVIIHRAVLGSVERMIAILT---ESYAGKWPFWLSPRQVMVVPVGP---QYDDYADKV 631 Query: 369 YARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 RL + G D D G+ + + A L F ++VG K S V ++ R + Sbjct: 632 RQRLHEAGFMAEADLDAGDTMNKKIRNAQLAQFNFILVVGEKERSSETVNVRTRDNKVHG 691 Query: 428 DMSLEEVINYASHR 441 ++S+++++ Sbjct: 692 EVSVDDLVAKLRRL 705 >gi|307150016|ref|YP_003885400.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7822] gi|306980244|gb|ADN12125.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7822] Length = 608 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 156/442 (35%), Gaps = 39/442 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD +L L G+ W P G + +++EQ + G + + Sbjct: 196 EEALKRDHRKLGRELGLFI-FSDVVGPGLPLWTPKGTIIRTTLEEFLKKEQVKRGYLPVV 254 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKA------MIYGPTHEEVMTDIFRSHIKS 124 P L DL+ SG + +Y ++M + ++++ + P + I++S ++S Sbjct: 255 TPHLARVDLFKISGHWQNYKEDMFPMMAEDEESALHEIGFVLKPMNCPFHIQIYKSELRS 314 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR+LP + +R E G + D +TPE + + + L + Sbjct: 315 YRDLPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLEEEFLSVVDLILSV 374 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F L LK+ R D + D + + + + Sbjct: 375 FKSLQLKNFKARLS--------------FRDPASDKYIGGDDVWNKAENAIRSAVQKMNM 420 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y D D+L ++ ++ + Sbjct: 421 EHFEAPGEAAFYGPKLDFI---FQDALEREWQLGTVQVDYNLP--------ERFDLEYVA 469 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + G++ + ++ + +P +AP ++ L+ + D Sbjct: 470 EDGSRKRPVMIHRAPFGSLERLVGILI---EEYAGDFPLWLAPIQVRLLPV---SDPQLD 523 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ A+L G D GE++G A+ P+ +VG+K V + + I+ R + Sbjct: 524 FAKEVAAQLLSQGIRAEADTSGERLGKMIRNAEKQKIPVMAVVGAKEVESNTLSIRTRAS 583 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G +++ EVI + +N+ Sbjct: 584 GELGTIAVSEVIEKVTEAITNH 605 >gi|160902700|ref|YP_001568281.1| prolyl-tRNA synthetase [Petrotoga mobilis SJ95] gi|189083505|sp|A9BGA8|SYP_PETMO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|160360344|gb|ABX31958.1| prolyl-tRNA synthetase [Petrotoga mobilis SJ95] Length = 582 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 100/242 (41%), Positives = 154/242 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK + P L+E P D++I S++L++R G I + S G+YS+LPLG K + + I+REE Sbjct: 1 MRFSKLYAPTLKETPSDSDIKSYELLIRGGFIRKISSGVYSYLPLGWKVIRKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G+ E+ +P + A+LW +GR++ YG E+++L DR+D+ GPTHEE++T + ++ Sbjct: 61 MEKIGSQEIMLPIIHPAELWKMTGRWEDYGPELMKLKDRHDREFTLGPTHEEIVTFLMKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ P +QI KFRDE+RPRFGV+R+REF+MKDAY+F SY + + Sbjct: 121 ELRSYKQFPVNLFQIATKFRDEIRPRFGVLRAREFIMKDAYTFHTDYNSLHESYQHFYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y I R+GLK + + A++G IGG SHEF VLA GE ++F + + + Sbjct: 181 YENIIKRIGLKYVVVEADTGAIGGSFSHEFHVLAQNGEGEIFYCEKCGYAASDEKARSGE 240 Query: 241 DI 242 D Sbjct: 241 DF 242 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 101/195 (51%), Gaps = 8/195 (4%) Query: 260 SDVHNEKLFDSLP----ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ K + P + RGIEVG IF G KYS M+A F +G+ MG Sbjct: 383 ADIRYVKEGEKCPTQGCNSTLKRTRGIEVGQIFELGDKYSSKMNAVFTDENGEQKPYIMG 442 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YG G R + A++E +D GIIWP SVAPF++++I + +D+ ++IY K Sbjct: 443 CYGWGVSRTLGAIVEQLNDENGIIWPKSVAPFEVAIIPVAMNDEAIVSTSQEIYDYFLKE 502 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM---SLE 432 G DV DD G +F DL+G P+++I+G + + + K+E+K R + +++ Sbjct: 503 GIDVIIDDREVSAGFKFKDIDLIGVPIKIIIGKR-LKEGKIELKQRDKEEGTLIEFKNVK 561 Query: 433 EVINYASHRFSNNRP 447 E+ + + N P Sbjct: 562 ELYDKVKEKLENYDP 576 >gi|224475774|ref|YP_002633380.1| threonyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus TM300] gi|222420381|emb|CAL27195.1| threonyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus TM300] Length = 635 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 73/428 (17%), Positives = 146/428 (34%), Gaps = 40/428 (9%) Query: 18 AEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSA 77 +L + + +++ G+ + GQ + ++R+ Q E+ P + Sbjct: 240 HRRLGKELDIFS--FSEYAPGMPFYAHNGQVIRLELQNMLRQLQFEADYEEVYTPFIMDE 297 Query: 78 DLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQL 137 LW SG +D Y M + +++ P + I+++H+ SYR+LP + Sbjct: 298 TLWKNSGHWDHYQDNM-YFTEVDEQTYALKPMNCPGHMLIYKNHLHSYRDLPIRMAEFGQ 356 Query: 138 KFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMR 196 R EL G+ R R F DA+ F + + + + + + + Sbjct: 357 VHRHELSGSLNGLFRVRTFNQDDAHIFVRRDQIESEILDVL--GLIHKVYSVFGFDYSIE 414 Query: 197 AESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPY 256 + P E DF S + ++ E+ A Y Sbjct: 415 LSTRPDDFMGEIE-----------------LWDFAEQSLENMLNQHGFKYTVNEKDGAFY 457 Query: 257 AATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ-MG 315 D+H + D+L + + ++ F K+ TF G+ + Sbjct: 458 GPKIDIH---IKDALGRSHQCGTVQLD----FQMPEKFD----LTFINQAGEKERPVVIH 506 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 G+ ++ G +W + + I + + DA + + RL K Sbjct: 507 RAIYGSSDRFIGILLEHFGGNLPLWLA-----PVQMEVILVNADLHLDAVKDLKRRLKKE 561 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G V D E++G + A L P ++VG V + V ++ R +++E+ + Sbjct: 562 GFRVELDLSDEKMGYKIRQAHLKKVPYTLVVGDNEVENGTVAVRKRGESEEHSINVEDFV 621 Query: 436 NYASHRFS 443 Sbjct: 622 KQLKEEVD 629 >gi|229025259|ref|ZP_04181679.1| Prolyl-tRNA synthetase [Bacillus cereus AH1272] gi|228736012|gb|EEL86587.1| Prolyl-tRNA synthetase [Bacillus cereus AH1272] Length = 566 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 120/267 (44%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL++ GE + S ++ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSEVGEDTIAYSDT-SNYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKALEKVATPDQKAIEEV 266 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTKPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|227534800|ref|ZP_03964849.1| threonyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187556|gb|EEI67623.1| threonyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 674 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 84/446 (18%), Positives = 164/446 (36%), Gaps = 40/446 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + D + L L + + G+ W+P G + I +++ G Sbjct: 249 RRQEAAEHDHRVIGRDLDLF--FVDPKVGAGLPYWMPNGATIRRVIERYIIDKEIADGYE 306 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYR 126 + P L + DL+ SG +D Y ++M D D M P + I+ HI+SYR Sbjct: 307 HVYTPVLANLDLYKTSGHWDHYREDMFPPMDMGDGEMLELRPMNCPSHIQIYNHHIRSYR 366 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP ++ + R E G+ R RE + D ++F + + + K+ + ++ Sbjct: 367 ELPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEE-FKKILRLIMDVY 425 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIIS 244 + R D T+ + D M S DD+ Sbjct: 426 EDFNITDYSFRLS--------------YRDPKNTEKYFDDDEMWTRSQSMLKGAMDDLKL 471 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y D+ + +L ++ +S ++ F ++ + T+ G Sbjct: 472 DYYEAEGEAAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----NLTYVG 520 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG++H M G + + I + +P +AP + LI + + + D Sbjct: 521 KDGEEHRPVMIHR--GIVGTMERFIAYLTEIYKGAFPTWLAPTQAVLIPVN--NDLHLDY 576 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT- 423 +I ++ G V DD E++G + A P V+VG K ++D+ V ++ Sbjct: 577 VNRIKKQMLVAGLRVKVDDRNEKMGYKIREAQTKKIPYTVVVGDKELNDAAVSVRRYGDE 636 Query: 424 ---GIREDMSLEEVINYASHRFSNNR 446 +M ++ ++ + + + Sbjct: 637 HTKEEAGNMFIDALVAEVKNYSRDGK 662 >gi|254503680|ref|ZP_05115831.1| threonyl-tRNA synthetase [Labrenzia alexandrii DFL-11] gi|222439751|gb|EEE46430.1| threonyl-tRNA synthetase [Labrenzia alexandrii DFL-11] Length = 703 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 80/445 (17%), Positives = 151/445 (33%), Gaps = 40/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD ++ L + G+ W P G N+ A R + Sbjct: 284 KGYLHMLEEAEKRDHRKLGREMNLF--HFQEEGPGVVFWHPKGWDIFQNLIAYKRRRL-K 340 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEML-----RLADRNDKAMIYGPTHEEVMTDIF 118 E++ P + LW SG + Y M +D+ P + +IF Sbjct: 341 DDYKEVNAPQVLHTSLWETSGHWAWYKDNMFSVQCADPESEDDRIFALKPMNCPGHVEIF 400 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + + R E G+MR R F DA+ F + ++ Sbjct: 401 KHGLKSYRDLPLRMAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEEQMAEECLKIN 460 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G + I ++ + P S E A+ + SE Sbjct: 461 -DLILSVYEDFGFEEIVVKLSTRPEKRVGSDEVWDHAE-----AVMTSVLKTIEEQSEGR 514 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 DI + A Y + L D++ + + ++ FG Sbjct: 515 IKTDI------LPGEGAFYGPKFEY---TLKDAIGRDWQCGTTQVDFNLPERFG------ 559 Query: 298 MSATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + +G+ V + G+M ++ ++ G +W + ++ Sbjct: 560 --AFYVDNNGEKKVPVMIHRAICGSMERFLGILIENYAGHFPLWFAPLQIVVATIT---- 613 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 +++ L G V D E+I + L P+ ++ G + + V Sbjct: 614 --SEADSYGQEVADLLKSKGLKVETDFRNEKINYKVREHSLAKVPVILVCGMREAEERTV 671 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 I+ + + M L+E + Sbjct: 672 NIRRLGSKNQTPMGLDEAVAAFVEE 696 >gi|229174485|ref|ZP_04302017.1| Prolyl-tRNA synthetase [Bacillus cereus MM3] gi|228609045|gb|EEK66335.1| Prolyl-tRNA synthetase [Bacillus cereus MM3] Length = 566 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 120/267 (44%), Positives = 167/267 (62%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+A+LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQAAELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y++++ + Sbjct: 121 EVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDRLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG +GG +HEF+VL++ GE + S ++ E Sbjct: 181 YSNIFARCGLNFRAVIADSGAMGGKDTHEFMVLSEVGEDTIAYSDT-SNYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKALEKVATPDQKAIEEV 266 Score = 166 bits (419), Expect = 1e-38, Method: Composition-based stats. Identities = 74/185 (40%), Positives = 105/185 (56%), Gaps = 3/185 (1%) Query: 261 DVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + MG YG Sbjct: 383 DLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTQPLIMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R VAA+ E +D G++WP +VAPF + +I + R+ E IY L + G + Sbjct: 443 IGVSRTVAAIAEQFNDENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYE 502 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE+ Y Sbjct: 503 VLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYI 561 Query: 439 SHRFS 443 ++ Sbjct: 562 ANILK 566 >gi|114706249|ref|ZP_01439151.1| threonyl-tRNA synthetase [Fulvimarina pelagi HTCC2506] gi|114538110|gb|EAU41232.1| threonyl-tRNA synthetase [Fulvimarina pelagi HTCC2506] Length = 670 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 79/451 (17%), Positives = 149/451 (33%), Gaps = 46/451 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD ++ L + G+ W G + ++ + +R + Sbjct: 233 KNYLHMLEEAEKRDHRKLGREMDLF--HFQEEGPGVVFWHSKGWRMFQSLVSYMRRRLDG 290 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----------DRNDKAMIYGPTHEE 112 T E++ P + LW SG + Y + M + + + + P + Sbjct: 291 T-YEEVNAPQILDKALWETSGHWGWYQENMFAVKSAHAFTRPDDAEADHRVFAIKPMNCP 349 Query: 113 VMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSK 171 IF+ +KSYR LP + + R E G+MR R F DA+ F + + Sbjct: 350 GHVQIFKHGLKSYRELPIRYAEFGNVHRYEPSGALHGLMRVRGFTQDDAHVFCTEEQLAA 409 Query: 172 HSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 L I+ G + I ++ + P S E A+ V Sbjct: 410 ECLRIN-DLILSIYADFGFEEIVVKLSTRPEKRVGSDENWDHAEAIMGDVL--------- 459 Query: 232 IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 E SI+E A Y + L D++ + ++ FG Sbjct: 460 --KEIEAKSGGKIRTSILEGEGAFYGPKFEY---TLRDAIGREWQCGTTQVDFNLPERFG 514 Query: 292 TKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 A + + + + G+M ++ ++ G +W + Sbjct: 515 --------AFYIDENSEKKRPVMIHRAICGSMERFLGILLENYAGHMPLWFVPQQAVVAT 566 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 + D ++ L G V D E+I + L P+ ++ G + Sbjct: 567 IT------SEADDYAREVTEVLRDAGLKVETDLRNEKINYKVREHSLAKVPVIIVCGRRE 620 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 + V I+ + + M LEE + + Sbjct: 621 AEERAVNIRRLGSKDQTAMGLEEAVQTLAAE 651 >gi|154245583|ref|YP_001416541.1| threonyl-tRNA synthetase [Xanthobacter autotrophicus Py2] gi|154159668|gb|ABS66884.1| threonyl-tRNA synthetase [Xanthobacter autotrophicus Py2] Length = 660 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 78/445 (17%), Positives = 145/445 (32%), Gaps = 40/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 ++ L+E RD ++ L + G W P G + A +R + Sbjct: 230 NAYIHRLEEAEKRDHRRLGREMDLF--HFQEEGPGTVFWHPKGWTLFQELVAYMRRRL-K 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLR-----LADRNDKAMIYGPTHEEVMTDIF 118 E++ P + A LW SG + Y + M + ++++ P + IF Sbjct: 287 ADYNEVNAPQVLDAGLWETSGHWGWYKENMFKVQSAGDETKDERVFALKPMNCPGHVQIF 346 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + R E G+MR R F DA+ F + + Sbjct: 347 KHGLKSYRDLPLRLAEFGAVHRYEPSGALHGLMRVRGFTQDDAHVFCTEEQMAAECLKIN 406 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L + G I ++ + P S A+ T+V +E Sbjct: 407 -DLILSTYADFGFDEIVVKLSTRPEKRVGSDAVWDHAEEVMTRVL-----------AEIE 454 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I+ A Y + L D++ + ++ FG Sbjct: 455 AASGGRIKTGILPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG------ 505 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + ADG+ + G+M ++ G +W ++ Sbjct: 506 --AFYVDADGQKKTPVMIHRAICGSMERFTGILIEHFAGHFPLWLAPTQVVVATIT---- 559 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++ L G V D E+I + L P+ ++ G K ++ + Sbjct: 560 --SDADDYAAEVAELLKAEGLRVELDVRNEKINLKVREHSLAKVPVLLVAGKKEAAERTL 617 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 I+ + + +L+EV+ Sbjct: 618 SIRRLGSNAQTGGTLDEVVAALVDE 642 >gi|229061422|ref|ZP_04198767.1| Prolyl-tRNA synthetase [Bacillus cereus AH603] gi|228717845|gb|EEL69493.1| Prolyl-tRNA synthetase [Bacillus cereus AH603] Length = 566 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 121/267 (45%), Positives = 165/267 (61%), Gaps = 1/267 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F P L+E P DAEI SH+L+LR G + Q++ GIYS+LP G K L V I+REE Sbjct: 1 MKQSMVFSPTLREVPADAEIKSHQLLLRAGFMRQNASGIYSFLPFGLKVLHKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA+E+ +P +Q+++LW ESGR+ SYG E++R+ DRN + G THEEV+TD+ R Sbjct: 61 MERAGAVELLMPAMQASELWQESGRWYSYGSELMRMKDRNAREFALGATHEEVITDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REFLMKDAYSF T E Y+ ++ + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYSGLYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R L + A+SG +GG +HEF+VL+D GE + S D+ E Sbjct: 181 YSNIFARCSLNFRAVIADSGAMGGKDTHEFMVLSDVGEDTIAYSDT-SDYAANIEMAPVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKL 267 + + E+ A E++ Sbjct: 240 ATYTKSDEAEKALEKVATPDQKAIEEV 266 Score = 162 bits (411), Expect = 9e-38, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 106/190 (55%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ + D P+ ARGIEVGH+F GT+YS M+ATF +GK + Sbjct: 378 VSQYTDLRFIQEGDQSPDGNGTILFARGIEVGHVFKLGTRYSEAMNATFLDENGKTKPLI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R VAA+ E +D G++WP SVAPF + +I + R+ IY L Sbjct: 438 MGCYGIGVSRTVAAIAEQFNDENGLVWPKSVAPFHVHVIPVNMKSDAQREMGGNIYNSLQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V DD E+ G +FA ADL G P++V VG K + VE+K R TG E++ +EE Sbjct: 498 EQGYEVLLDDRAERAGVKFADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEE 556 Query: 434 VINYASHRFS 443 + Y ++ Sbjct: 557 LQTYIANILK 566 >gi|199599516|ref|ZP_03212905.1| Threonyl-tRNA synthetase [Lactobacillus rhamnosus HN001] gi|258508749|ref|YP_003171500.1| threonyl-tRNA synthetase [Lactobacillus rhamnosus GG] gi|199589585|gb|EDY97702.1| Threonyl-tRNA synthetase [Lactobacillus rhamnosus HN001] gi|257148676|emb|CAR87649.1| Threonyl-tRNA synthetase [Lactobacillus rhamnosus GG] gi|259650055|dbj|BAI42217.1| threonyl-tRNA synthetase [Lactobacillus rhamnosus GG] Length = 657 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 79/445 (17%), Positives = 160/445 (35%), Gaps = 38/445 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + RD + L L + + G+ W+P G + I +++ G Sbjct: 232 RRKEAAERDHRVIGRDLDLF--FVDPKVGAGLPYWMPNGATIRRVIERYIIDKEIADGYE 289 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYR 126 + P L + DL+ SG +D Y ++M D D M P + I+ HI+SYR Sbjct: 290 HVYTPVLANLDLYKTSGHWDHYREDMFPPMDMGDGEMLELRPMNCPSHIQIYNHHIRSYR 349 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ + R E ++ + + + + + + K+ + ++ Sbjct: 350 ELPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEEFKKILRLIMDVYE 409 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIISL 245 + R D T+ + D M S DD+ Sbjct: 410 DFNITDYSFRLS--------------YRDPKNTEKYFDDDEMWTRSQSMLKGAMDDLHLD 455 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y D+ + +L ++ +S ++ F ++ + T+ G Sbjct: 456 YYEAEGEAAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----NLTYVGK 504 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DG++H M G + + I + +P +AP + LI + + + D Sbjct: 505 DGEEHRPVMIHR--GIVGTMERFIAYLTEIYKGAFPTWLAPTQAVLIPVN--NDLHLDYV 560 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT-- 423 +I ++ G V DD E++G + A P V+VG K ++D+ V ++ Sbjct: 561 NRIKRQMQAAGLRVKVDDRNEKMGYKIREAQTKKIPYTVVVGDKELNDAAVSVRRYGDEH 620 Query: 424 --GIREDMSLEEVINYASHRFSNNR 446 +M ++ ++ + + + Sbjct: 621 TEEEAGNMFIDAMVAEVKNYSRDGK 645 >gi|70726243|ref|YP_253157.1| threonyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435] gi|68446967|dbj|BAE04551.1| threonyl-tRNA synthetase 1 [Staphylococcus haemolyticus JCSC1435] Length = 645 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 70/428 (16%), Positives = 147/428 (34%), Gaps = 32/428 (7%) Query: 21 ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW 80 L L T G+ WLP G + I +++ G + P L + +L+ Sbjct: 246 IGKDLELFTNN-QLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVELY 304 Query: 81 VESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 SG +D Y +M ++ M+ P + ++ + SYR LP ++ Sbjct: 305 KTSGHWDHYRDDMFPPMKLDETEEMVLRPMNCPHHMMVYNNRPHSYRELPIRIAELGTMH 364 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 R E ++ + + + P+ K + ++ ++ G + R Sbjct: 365 RYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKDEFKRVVNMIQEVYSDFGFEDYTFRLS- 423 Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIISLNSIVEQWTAPYAA 258 D + + + D M + D++ A Y Sbjct: 424 -------------YRDPEDKEKYMDDDEMWNKAETMLKEAVDEMGLPYVEAIGEAAFYGP 470 Query: 259 TSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 DV ++ ++ + + +S I+ F ++ T+ G+DG++H + G Sbjct: 471 KLDV---QVKTAMGKEETLSTAQID----FLLPERF----ELTYIGSDGENHRPVVIHRG 519 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 + + + + +I +N+ H D + L G Sbjct: 520 VVSTMERFVAFLTEETKGAFPTWLAPKQVEIIPVNVDLH----YDYARNLQDELKSQGVR 575 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E++G + A + P Q++VG K V +++V ++ + +E + +E I Sbjct: 576 VEIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRKYGSQDQETVEKDEFIWNL 635 Query: 439 SHRFSNNR 446 + Sbjct: 636 VDEIRLKK 643 >gi|119511594|ref|ZP_01630701.1| prolyl-tRNA synthetase [Nodularia spumigena CCY9414] gi|119463755|gb|EAW44685.1| prolyl-tRNA synthetase [Nodularia spumigena CCY9414] Length = 602 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 115/240 (47%), Positives = 151/240 (62%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+++P DAEI SHKL+LR G I + GIY++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLRDDPADAEIPSHKLLLRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N T A E +P LQ A+LW ESGR+D+Y K M L DR ++ + GPTHEEV+T + Sbjct: 61 MNATNAQECLLPQLQPAELWKESGRWDTYTKAEGIMFSLIDRREQQLGLGPTHEEVITTV 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF + K +Y M Sbjct: 121 ARDMIRSYRQLPLHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHVDEVSLKETYQDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 + +Y + R GL + A+SG IGG S EF+VLAD GE +V ++D + E Sbjct: 181 YQAYSNMLRRSGLAFRAVEADSGAIGGSGSTEFMVLADAGEDEVLYTEDG-KYAANVEKA 239 Score = 173 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 67/200 (33%), Positives = 109/200 (54%), Gaps = 3/200 (1%) Query: 247 SIVEQWTAPYAATSDVHNEKLFDSL--PENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + EQ+ P ++ PE +ARGIEVGHIF GTKYS MSAT+ Sbjct: 400 NWDEQFKLPELVVDIRKARPGDRAVHDPEQTLQTARGIEVGHIFQLGTKYSQAMSATYTN 459 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 G+++ + MG YG+G R+ + +E S+D GIIWP ++AP+ + D + Sbjct: 460 EQGEENPLFMGCYGVGVSRLAQSAVEQSYDKDGIIWPVAIAPYHAIVTIPNIKDAQQVEI 519 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +K+Y +L+K G + DD E+ G +F ADL+G P +++ G + +++ KVE+ R T Sbjct: 520 AQKLYTQLNKAGVETLLDDRDERAGVKFKDADLIGIPYRIVTG-RAINNGKVEVVKRATR 578 Query: 425 IREDMSLEEVINYASHRFSN 444 +++++EEV+N Sbjct: 579 ETQEIAIEEVVNTLQQWIKT 598 >gi|332705120|ref|ZP_08425202.1| prolyl-tRNA synthetase, family II [Lyngbya majuscula 3L] gi|332356070|gb|EGJ35528.1| prolyl-tRNA synthetase, family II [Lyngbya majuscula 3L] Length = 603 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 123/276 (44%), Positives = 166/276 (60%), Gaps = 7/276 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L+E+P +AEI SHKL+LR G I + GIY++LP+ + L V+ I+REE Sbjct: 1 MRLSQMLLVTLREDPVEAEIPSHKLLLRAGYIRRIGSGIYAYLPMMWRVLKKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + TGA E +P LQ ++LW ESGR+D+Y K M L DR + + GPTHEEV+T + Sbjct: 61 MDATGAQECLLPQLQPSELWKESGRWDTYTKAEGIMFALIDRQKRELGLGPTHEEVITTV 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E K +Y M Sbjct: 121 AKDMIRSYRQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHTDHESLKKTYQAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y +F R GL+ + A+SG IGG S EF+VLAD GE ++ ++D + E Sbjct: 181 DQAYRNMFSRSGLEFRAVEADSGAIGGSGSQEFMVLADAGEDEILYTEDG-KYSANVEKA 239 Query: 238 ---DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 D S + E+ P +T D + L S Sbjct: 240 VSLPPDLEPSPYNTYEKLETPNTSTIDTLCQFLKCS 275 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 67/173 (38%), Positives = 97/173 (56%), Gaps = 1/173 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P SARGIEVGHIF GTKYS M AT+ G++ + MG YG+G R+ A +E Sbjct: 427 PNQTLKSARGIEVGHIFQLGTKYSSAMGATYTSEQGEEIPLCMGCYGVGVSRLAQAAVEQ 486 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 S+D GIIWP ++AP+ + + D A EK+Y +L++ G + DD E+ G + Sbjct: 487 SYDKDGIIWPVAIAPYHVIITIPNVGDTQQMAAAEKLYTQLNEAGIETLLDDRNERAGVK 546 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 F ADL+G P +++ G + + D KVE+ R T ++SLEEV+ Sbjct: 547 FKDADLIGIPYRIVTG-RSLKDGKVEVVERATHKSTELSLEEVLPTLKQWIDT 598 >gi|297545340|ref|YP_003677642.1| prolyl-tRNA synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296843115|gb|ADH61631.1| prolyl-tRNA synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 570 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 116/255 (45%), Positives = 161/255 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +AEI SH LML+ ++ + + G+Y +LPLGQ+ L V IIREE Sbjct: 1 MRLSQLLVPTLREIPAEAEIPSHILMLKAALMRKLASGVYIYLPLGQRVLRKVEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ + L A+L ESGR+D +G EM +L DRN++ GPTHEEV TD+ R+ Sbjct: 61 MDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFKLKDRNERDFCLGPTHEEVFTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE RPRFGVMRSREF+MKDAYSFD+ EG S+ KM+ + Sbjct: 121 EVKSYRQLPLILYQIQTKFRDERRPRFGVMRSREFIMKDAYSFDVDWEGLDKSFEKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK + + A+SG +GG S EF+V++ GE + + + Sbjct: 181 YCRIFDRCGLKYLVVEADSGAMGGKDSKEFMVISSVGEAVIAYCDNCGYAANEEKAECLI 240 Query: 241 DIISLNSIVEQWTAP 255 + + ++ + Sbjct: 241 NQEIVEEMLPKEKVY 255 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 75/190 (39%), Positives = 103/190 (54%), Gaps = 3/190 (1%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P RGIEVGHIF GTKYS + A + +G + + MG Sbjct: 381 VVADIKNVIEGDKCPRCGSPLKIDRGIEVGHIFKLGTKYSDALGAKYVDEEGNEKPIVMG 440 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R VAA+IE +HD KGIIWP SVAP+ + ++ + ++ E IYA L K Sbjct: 441 CYGIGINRTVAAIIEQNHDDKGIIWPMSVAPYHVIIVPVNVSNEAQNGVAEDIYAALQKE 500 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD + G +F ADLLG P+++ VG K VSD VEIK R E++ + +V+ Sbjct: 501 GIEVLIDDRDLRAGVKFNDADLLGIPIRITVGKK-VSDGIVEIKLRENEEAEEVKISDVV 559 Query: 436 NYASHRFSNN 445 + Sbjct: 560 EKVKNIIKEK 569 >gi|312795091|ref|YP_004028013.1| Prolyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454] gi|312166866|emb|CBW73869.1| Prolyl-tRNA synthetase (EC 6.1.1.15) [Burkholderia rhizoxinica HKI 454] Length = 589 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 122/224 (54%), Positives = 166/224 (74%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAEI SH+LM+R GMI + + GIY+++P+G +++ V AI+REE Sbjct: 12 MKASRFFIGTLKEAPADAEIVSHQLMVRAGMIRRVAGGIYNYMPIGLRSIRKVEAIVREE 71 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q A+LW ES R++ YG E+LR+ DR+D+ + GPTHEEV+TDI R Sbjct: 72 MNRAGAVELLMPAVQPAELWQESSRWEQYGPELLRVKDRHDRDFVVGPTHEEVVTDIARK 131 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR +P FYQ+Q KFRDE+RPRFGVMR REF+MKDAYSFD G + SY KM+ + Sbjct: 132 EIKSYRQMPVNFYQVQTKFRDEIRPRFGVMRGREFIMKDAYSFDRDRAGLQLSYQKMYDA 191 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 Y+RIF RLGL+ + A++G IGG SHEF V+A TGE + Sbjct: 192 YVRIFTRLGLEFRAVAADNGAIGGTGSHEFHVIAATGEDAIAYC 235 Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 68/192 (35%), Positives = 101/192 (52%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N + D P + RGIEVGH+F GTKYS M ATF +GK + Sbjct: 393 PEPEVADLRNVRKGDPSPDGRGELDLCRGIEVGHVFQLGTKYSEAMGATFLDENGKPAPM 452 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE + D +GIIWP+++APF + L + R+ K+Y Sbjct: 453 MMGCYGIGITRILGAAIEQNFDERGIIWPEAIAPFHLVLCPMGYERSDAVREQAHKLYDE 512 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD GE+ G FA +L+G P ++++G + + + K+E + R + L Sbjct: 513 LLGAGMDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKEGKIEYQGRRDVEPTLLPL 572 Query: 432 EEVINYASHRFS 443 E+ + R Sbjct: 573 EQAAAWVVERVR 584 >gi|295099750|emb|CBK88839.1| threonyl-tRNA synthetase [Eubacterium cylindroides T2-87] Length = 391 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 74/416 (17%), Positives = 141/416 (33%), Gaps = 37/416 (8%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + +++ G+ +LP G + + EE + G + P + S +LW SG ++ Y + Sbjct: 6 VSEYAPGMPIFLPNGMILRNILEQFWYEEHTKAGYQFIKTPIMMSKELWETSGHWEHYKE 65 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVM 150 M +D+ P + ++ S + SY+ LP+ ++ R E G+ Sbjct: 66 NMYTTM-VDDREFAIKPMNCPGALLVYNSSLHSYKELPYRIGELGQVHRHEASGALNGLF 124 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ +TP+ + + RI+ GL + P Sbjct: 125 RVRTFTQDDAH-LFVTPDQIESEVKNVLGLIDRIYSVFGLPYDI-ELSTRP--------- 173 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 E+ S++ + + A Y D+H + DS Sbjct: 174 -------ESGYIGSEEIWQKSEEALANACIHAGKEYKVNPGDGAFYGPKLDIH---IKDS 223 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVI 329 L + +++ FG T+ DG + G++ ++ Sbjct: 224 LGRVWQCGTIQLDMNLPERFG--------CTYVDKDGSKKTPVMLHRVIYGSIERFIGIL 275 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 G +W + I H + + +K+ L G V DD E++G Sbjct: 276 IEHFAGHFPLWLA-----PRQFVVIPVHQEKHLEYAQKVVKALQDAGMRVELDDRNEKLG 330 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 + A + P Q++VG + V I+ + M+L E + Sbjct: 331 YRVREAQMSKVPYQIVVGDGEAENETVTIRQSGKKESKTMALNEALEKFVKEVEEK 386 >gi|226321417|ref|ZP_03796944.1| threonyl-tRNA synthetase [Borrelia burgdorferi Bol26] gi|226233213|gb|EEH31965.1| threonyl-tRNA synthetase [Borrelia burgdorferi Bol26] Length = 581 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 72/443 (16%), Positives = 155/443 (34%), Gaps = 37/443 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L + +E RD +L L + + G+ + P G K + REE ++ Sbjct: 172 RSYLNLREEIKKRDHRKLGKELDLFSIH-EEIGPGLVFFHPNGAKIRALIEDFWREEHSK 230 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + LW SG D Y M + + P + I+ + Sbjct: 231 NGYDILFTPHIGKSWLWQTSGHLDFYKDSMFEKIEMDKSDYYLKPMNCPFHIAIYNTGKH 290 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LPF + ++ +R E G+MR+R F DA+ + ++ + Sbjct: 291 SYRDLPFRWAELGTVYRYEKIGALHGMMRARGFTQDDAHIICTHSQVLDE-IKEVLRFAI 349 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ + G + + P + + + + D Sbjct: 350 YMWSKFGFSNPKAYLSTKP-----------------DKSVGNDSDWEMSLKVLKETLSDF 392 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I + A Y D+ K+ DSL ++S + F ++++ +A Sbjct: 393 EVPYEIDKGGGAFYGPKIDL---KIVDSLEREWQMSTIQFD----FNLPERFNMTYTAE- 444 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ ++ + G +W V I + NI Sbjct: 445 --DGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPLWLSPVQVVIIPVNNI------VE 496 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D K++ + G + D+ ++ ++ P I+G + ++ ++ I+ R Sbjct: 497 DYAIKVFNKFKNEGIRIKLDNSSSRMNAKIREYQAKKIPYMFIIGEREATEERISIRTRT 556 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 M L+E + + + + Sbjct: 557 NEQINGMKLDEALKFILFKIRDK 579 >gi|224476386|ref|YP_002633992.1| prolyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus TM300] gi|222420993|emb|CAL27807.1| putative prolyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus TM300] Length = 566 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 113/237 (47%), Positives = 163/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK F+P ++E P +AE SH+L+L+ G+I Q + G+YS+LPL + L+ + AI+REE Sbjct: 1 MRQSKVFIPTMREVPAEAEALSHRLLLKAGLIKQSTSGVYSYLPLATRVLNKITAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+E+ +P LQ ++LW ESGR+D+YG E++RL DRN + GPTHEEV+T + R Sbjct: 61 MESIDAVEILMPALQPSELWEESGRWDAYGSELMRLTDRNGRQFALGPTHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +YN+M+ + Sbjct: 121 EVKSYKQLPLTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDETYNQMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R G+ + P+ A+SG IGG +HEF+ L++ GE + S++ D+ E Sbjct: 181 YSRIFKRAGINARPVVADSGAIGGSHTHEFMALSEIGEDTIVYSEN-SDYAANIEKA 236 Score = 154 bits (389), Expect = 3e-35, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 106/196 (54%), Gaps = 7/196 (3%) Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + VE++ E L D E K A GIEVG +F GTKYS M+ATF Sbjct: 374 DFNVEEFGDFRFILE---GEPLSDGSGEAK--FAEGIEVGQVFKLGTKYSETMNATFLDN 428 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 GK + MG YGIG R ++A++E + D GI+WP SV PF + LI I R+ Sbjct: 429 QGKAKPLIMGCYGIGVSRTLSAIVEQNSDENGIVWPKSVTPFDLHLITINPKKDDQRELG 488 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 ++IYA L + +V +DD E+ G +F ADL+G P++++VG + + VE+K R G Sbjct: 489 DQIYAELQQS-YEVLYDDRKERAGVKFNDADLIGLPIRIVVGKR-ADEGIVEVKRRDNGE 546 Query: 426 REDMSLEEVINYASHR 441 E++ + + +Y + Sbjct: 547 SEEVEVSNLASYIDNL 562 >gi|309811262|ref|ZP_07705053.1| threonine--tRNA ligase [Dermacoccus sp. Ellin185] gi|308434802|gb|EFP58643.1| threonine--tRNA ligase [Dermacoccus sp. Ellin185] Length = 665 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 69/442 (15%), Positives = 139/442 (31%), Gaps = 30/442 (6%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + G+ + P G + +R G Sbjct: 246 YLERLAEAEKRDHRKLGAELDLFS-FPENIGPGLPVFHPKGGIIKREMEDYVRRRHIEEG 304 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + DL+ SG Y M D + + + + +IFRS +SY Sbjct: 305 FSYVGTPHIAKEDLFYTSGHLPYYADGMFPPLDVDGQNYRLKAMNCPMHNEIFRSRGRSY 364 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 R LP F++ +RDE + + +D +TPE + + L + Sbjct: 365 RELPLRFFEFGTVYRDEKSGVLSGLTRVRMITQDDSHSYVTPEQAPGEIKHLLDFILGLL 424 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G+ + + + GD +FI + D + + Sbjct: 425 RDFGMNDFYLELSTRDVDGDKKDKFIGTDEQ-----------WDIATKVLSDVALESGLE 473 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 A Y + + D++ ++S + FG ++ A Sbjct: 474 LVPDPGGAAFYGPKI---SVQARDAIGRTWQMSTIQYDFNQPARFG--------LEYQAA 522 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG + S G++ V+ + G W V + + + D Sbjct: 523 DGSRQQPVMVHSAKFGSIERFLGVLVEHYAGAFPAWLAPVQVLAVPVA------EEYYDY 576 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + +L + G V D ++ + A P +I G + + V + R Sbjct: 577 LQDVAMKLREAGVRVEVDMSDDRFPKKIRNASKSKAPFILIAGEEDRDNGAVSFRFRDGS 636 Query: 425 IREDMSLEEVINYASHRFSNNR 446 + + + + I + + + Sbjct: 637 QKNGVPVADAIAEITRVITERQ 658 >gi|240143521|ref|ZP_04742122.1| threonine--tRNA ligase [Roseburia intestinalis L1-82] gi|257204557|gb|EEV02842.1| threonine--tRNA ligase [Roseburia intestinalis L1-82] gi|291540396|emb|CBL13507.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Roseburia intestinalis XB6B4] Length = 591 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 73/434 (16%), Positives = 152/434 (35%), Gaps = 33/434 (7%) Query: 16 RDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD ++ L M +G+ +LP G + I+ ++ + G + + P + Sbjct: 181 RDHRKIGKEMHLF--MSDDLVGRGLPMFLPKGYTVWQELENYIKAKERKLGYLHVMTPCV 238 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQ 134 + +L+ SG +D Y + M + ++ + P + I+ + + SY++LP + Sbjct: 239 GTVNLYKTSGHWDHYKENMFPAMEVEGESFVLRPMNCPHHMMIYANRMHSYKDLPIRIGE 298 Query: 135 IQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSI 193 I FR E G+ R R F DA+ +TPE + + K+ + + Sbjct: 299 IAHDFRFEASGTLKGIERGRHFCQNDAH-LFVTPEQIESEFAKVVELIFDTYKDFNITDY 357 Query: 194 PMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT 253 + + D E + + DDI + Sbjct: 358 RCVLSLRD-----PEDKVKYHDDDEM--------WNNAENALRKVLDDIGIEYTEEIGEA 404 Query: 254 APYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 A Y DV + ++ +S ++ F K+ + ++ +DG Sbjct: 405 AFYGPKLDV---NVKPAIGNEYTLSTCQLD----FCLPAKF----NLSYIDSDGTKKTPV 453 Query: 314 M-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 + +G++ A I + P +AP + ++ +K D+ +Y L Sbjct: 454 VLHRAILGSLDRFMAYIL---EETKGNLPLWLAPVQAKILPVKNEDEELNAYSHDLYKYL 510 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G V D+ E++G + A + P +++G +D V + +S E Sbjct: 511 DDNGIRVEIDERNEKLGYRIREAQMEKVPYLLVLGKNEAADGTVSYRLHGEQNSTTVSRE 570 Query: 433 EVINYASHRFSNNR 446 + + + Sbjct: 571 DFLALLKEDIRTKK 584 >gi|328955488|ref|YP_004372821.1| prolyl-tRNA synthetase [Coriobacterium glomerans PW2] gi|328455812|gb|AEB07006.1| prolyl-tRNA synthetase [Coriobacterium glomerans PW2] Length = 576 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 107/227 (47%), Positives = 153/227 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + P L+E+P +A++ SH+L+LR GMI + + GIYS+LPL ++L + I+R+E Sbjct: 5 MKMSNLYAPTLKEDPAEADLVSHRLLLRAGMIRKMASGIYSYLPLAWRSLKKIEEIVRDE 64 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E +P L A+LW SGR+D+YG E++R+ DR+ + GPTHEE +TD+ ++ Sbjct: 65 MDAIGAQECLLPILTDAELWRLSGRWDAYGPELMRIVDRHQRQFALGPTHEETVTDLVKN 124 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP + YQIQ KFRDE+RPRFG+MR REF+MKDAYSF T + Y M + Sbjct: 125 ELASYRQLPVSLYQIQTKFRDEMRPRFGLMRGREFIMKDAYSFSATQASLQECYEDMKAA 184 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 Y RI R GL ++P+ A+SG IGGD S E++ LAD+GE + Sbjct: 185 YGRICERCGLAALPVAADSGQIGGDTSVEYMALADSGEASLVYCDSC 231 Score = 162 bits (410), Expect = 9e-38, Method: Composition-based stats. Identities = 82/191 (42%), Positives = 111/191 (58%), Gaps = 2/191 (1%) Query: 258 ATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ D P + ARGIEV +F GTKYSLPM ATF G+ + MG Sbjct: 381 EWADLVTVVAGDPCPVCGEELSGARGIEVSQVFQLGTKYSLPMGATFTDEAGRTQPMLMG 440 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YG+G R +AAV+E HD GIIWP SVAP+++S++ + Q C A +++ LS Sbjct: 441 CYGVGISRTLAAVVEQHHDEAGIIWPVSVAPYEVSIVLLDTKLQACVAAGDRLAFELSAG 500 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G +FA DL+GFP Q+IVG + ++ VEIK R TG R D++L++ Sbjct: 501 GIDVVLDDRAERPGVKFADNDLMGFPYQIIVGKRGIAAGTVEIKDRATGERVDVALDDAS 560 Query: 436 NYASHRFSNNR 446 NYA R R Sbjct: 561 NYAVERIRRAR 571 >gi|157363113|ref|YP_001469880.1| prolyl-tRNA synthetase [Thermotoga lettingae TMO] gi|166980167|sp|A8F3T2|SYP_THELT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157313717|gb|ABV32816.1| prolyl-tRNA synthetase [Thermotoga lettingae TMO] Length = 575 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 103/251 (41%), Positives = 157/251 (62%), Gaps = 1/251 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ + P L+E P DAE+ SH L+ R G I + + G+YS+LPL ++ L + AI+R+E Sbjct: 1 MKFSQLYAPTLKEAPADAEVISHALLYRAGFIRKIAAGVYSYLPLAKRTLSKIEAIVRKE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E+S+P +Q A+LW +GR+D YG EM++L DR+++ GPTHEEV T + + Sbjct: 61 MNEIGAQEVSMPVIQPAELWKTTGRWDDYGPEMMKLKDRHERDFTLGPTHEEVFTHMVKD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQI K+RDE+RPRFG++R+REF+MKD YSF + + +Y + Sbjct: 121 ELRSYKQLPLFLYQIGPKYRDEIRPRFGLLRAREFIMKDGYSFHDSDQSLNETYEACKNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I ++GLK I + A SG IGG+ SHEF+ A GET + + + E + Sbjct: 181 YRKITEKIGLKYIIIEAASGAIGGNESHEFVSFAPVGETNLLKCEKC-GYSSNDEQAPYR 239 Query: 241 DIISLNSIVEQ 251 + +E+ Sbjct: 240 GKYHRDEEIEK 250 Score = 143 bits (361), Expect = 5e-32, Method: Composition-based stats. Identities = 66/192 (34%), Positives = 96/192 (50%), Gaps = 5/192 (2%) Query: 261 DVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ + D P ++GIE+ IF GTKYS M+A + G+ MG YG Sbjct: 382 DLRVVQPNDPCPVCGEQLTGSKGIEIAQIFKLGTKYSKAMNALYMDDKGEVKPFIMGCYG 441 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 G R +AA++E HD GI+WP SVAPF++ + + A DQ R +K+Y L D Sbjct: 442 WGISRTMAAIVEQLHDEDGILWPRSVAPFELIITVVSAQDQDQRIFAQKLYNSLLSSEID 501 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS--LEEVIN 436 V DD G +F ADL+GFPL++ VG K + + VE+K R + +S L ++ + Sbjct: 502 VLLDDRDISPGMKFKDADLIGFPLRITVG-KSLKEGMVELKSRNSSKSIKVSAELSKINS 560 Query: 437 YASHRFSNNRPV 448 P Sbjct: 561 VLFKMLEEYNPH 572 >gi|259500519|ref|ZP_05743421.1| threonine-tRNA ligase [Lactobacillus iners DSM 13335] gi|302191209|ref|ZP_07267463.1| threonyl-tRNA synthetase [Lactobacillus iners AB-1] gi|309807138|ref|ZP_07701115.1| threonine--tRNA ligase [Lactobacillus iners LactinV 03V1-b] gi|309810241|ref|ZP_07704086.1| threonine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D] gi|259167903|gb|EEW52398.1| threonine-tRNA ligase [Lactobacillus iners DSM 13335] gi|308166489|gb|EFO68691.1| threonine--tRNA ligase [Lactobacillus iners LactinV 03V1-b] gi|308169513|gb|EFO71561.1| threonine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D] Length = 643 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 73/434 (16%), Positives = 154/434 (35%), Gaps = 36/434 (8%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L L + + G+ W+P G + I +++ G + P L Sbjct: 238 RDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRVIERYIIDKEVADGYQHVYTPVL 295 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y ++M D D M P + I+ HI+SYR LP Sbjct: 296 MNLDAYKTSGHWAHYREDMFPPMDMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIA 355 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + K+ + ++ + Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVELDQVQSE-FAKILKLIMEVYRDFDITD 414 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + F + + + DD+ E Sbjct: 415 YYFRLS-------------YRDPKNTDKYFANDEMWERSQKMLKGAMDDLGLEYVEAEGE 461 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ + ++ G DG++H Sbjct: 462 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----NLSYVGKDGEEHRP 510 Query: 313 -QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + +G M A + + G W + + I ++ + + + + Sbjct: 511 VMVHRGIVGTMERFIAYLTEIYKGAFPTWLA-----PLQVKIIPVNNDAHGEYAQNVKDQ 565 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L K+G D E++G + A P +++G + + V ++ + +E +L Sbjct: 566 LMKLGFRAEVDFRNEKLGYKIREAQTQKVPYTLVLGDDELQHNSVNVRKYGSEDQESKAL 625 Query: 432 EEVINYASHRFSNN 445 E ++ S ++ Sbjct: 626 SEFVSELSADVASY 639 >gi|320536876|ref|ZP_08036869.1| threonyl-tRNA synthetase [Treponema phagedenis F0421] gi|320146259|gb|EFW37882.1| threonyl-tRNA synthetase [Treponema phagedenis F0421] Length = 583 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 152/442 (34%), Gaps = 38/442 (8%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L++ RD L + + + G W P G V +RE+ G Sbjct: 172 YLAMLEDAEKRDHRKLGKSFGLF--HLDEENPGQIFWHPNGWALYLLVQNYVREKIKADG 229 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW SG + Y + M + + + P + +IF+ IKSY Sbjct: 230 YLEVKTPFVMPQSLWERSGHWAKYRENMF-ITESEKRLFALKPMNCPGHIEIFKQGIKSY 288 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E G++R R F+ DA+ F T K + Sbjct: 289 RDLPLRLAEFGSCTRNEPSGSLHGILRVRGFVQDDAHIFC-TEAQISSEVKKFCALLKNM 347 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + +V T + D + D Sbjct: 348 YADFGFAEDSI---------------LVKFSTRPEKRVGDDATWDRAEKALADACKDAGL 392 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y + L DSL + ++ +K ++A + G Sbjct: 393 EYEVAEGEGAFYGPKLEF---TLIDSLGREWQCGTIQVDY----QLPSK--ERLNAEYIG 443 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + H + +G++ ++ + G W + I + D Sbjct: 444 EDNQKHNPVMLHRAALGSLERFIGILIEHYAGAFPPWLSPLQAVVIPVAP------TFND 497 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 EK L+ G V D +++ ++ P Q+IVG K ++ + ++ Sbjct: 498 YAEKTAKDLAAQGLRVKADIDTDRMNAKIRKYQEQRIPYQLIVGEKEAANGSLAVRIHH- 556 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G ++ M+ E +N+ + + + Sbjct: 557 GDQKTMTTEAFVNFIKEKIATH 578 >gi|167756637|ref|ZP_02428764.1| hypothetical protein CLORAM_02174 [Clostridium ramosum DSM 1402] gi|237733925|ref|ZP_04564406.1| threonyl-tRNA synthetase [Mollicutes bacterium D7] gi|167702812|gb|EDS17391.1| hypothetical protein CLORAM_02174 [Clostridium ramosum DSM 1402] gi|229383006|gb|EEO33097.1| threonyl-tRNA synthetase [Coprobacillus sp. D7] Length = 577 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 67/442 (15%), Positives = 156/442 (35%), Gaps = 40/442 (9%) Query: 8 LPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E R D + +L L M+ +++ G+ +LP G + + EE + G Sbjct: 173 LELLEEAKRRDHKKLGKELGLF--MMSEYAPGMPFFLPKGMILRNTLEQFWYEEHAKEGY 230 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P + S +LW SG +++Y ++M +D+ P + ++++ + SY+ Sbjct: 231 EFIKTPIMMSRELWETSGHWENYKEDMYTSM-VDDREFAIKPMNCPGSLLVYKNSLHSYK 289 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ R E G+ R R F DA+ + +TP+ + ++ R++ Sbjct: 290 DLPLRMGELGQVHRHEASGALNGLFRVRTFTQDDAHIY-MTPDQIEGEIIRLINFIDRVY 348 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 L L + P E + + + Sbjct: 349 GSLNLSYEI-ELSTRP----------------EKKYIGDLAIWEKSEAALAAACKAAGKD 391 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + A Y D H + DSL + +++ T+ Sbjct: 392 YKVNPGDGAFYGPKLDFH---VKDSLGRVWQCGTIQLDMNLP--------ERFDITYIDD 440 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 G+ V + G++ ++ G +W + + + +++ D Sbjct: 441 KGEKVRPVMLHRVIFGSIERFIGILIEHFAGVFPLWLA-----PVQVKVLPVNNEYHLDY 495 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ L G V D E++G + + P +++G+ + V + Sbjct: 496 AKEVTELLKDKGFKVELDAREEKLGYRIREGQMEKVPYLLVLGNNERDEKTVTYRKHGEQ 555 Query: 425 IREDMSLEEVINYASHRFSNNR 446 + + ++ + + + + + Sbjct: 556 KQITVPFDDFVAMLNQQIVDKK 577 >gi|99035129|ref|ZP_01314912.1| hypothetical protein Wendoof_01000242 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 536 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 84/442 (19%), Positives = 155/442 (35%), Gaps = 40/442 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L L+E RD + + L I + + G W G + + + IR++ Sbjct: 130 NAYLECLKEAEKRDHRKIAKDMDLF--HIQEEAVGQVFWHEQGYILYNVLESYIRKKLIN 187 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L S +LW SG +D + + M + + +K + P + IF SH + Sbjct: 188 NGYFEVKTPILVSKELWERSGHWDKFRENMFIVDESENKKLAIKPMNCPCHVQIFNSHTR 247 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + R+E G+MR R F DA+ F + + + + Sbjct: 248 SYRDLPIRMAEFGTCHRNESSGSLHGLMRVRGFTQDDAHIFCMEEQVNSETIKF-CDLLK 306 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ LG I ++ P + E D + + Sbjct: 307 EVYSELGFNEISVKFSDRPDIRAGNDE-----------------VWDRAEKALLEAVKEA 349 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + L D++ N + ++ G A + Sbjct: 350 GLSYKLNPGEGAFYGPKLEF---VLKDAIGRNWQCGTLQVDFILPERLG--------AFY 398 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 GADG H+ + +G ++ ++ GK +W +++ N Sbjct: 399 IGADGHKHHPVMLHRAILGTFERFIGILIENYAGKFPVWLAPTQLAILTITN------EA 452 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +I L + G V D E+I + + P+ IVG V+ V +++ Sbjct: 453 DGYATEISNILKEQGVRVKTDLTNEKISYKIRLHSSNKVPILWIVGKNEVTSKTVSVRNL 512 Query: 422 LTGIREDMSLEEVINYASHRFS 443 + +E SLE+ + Sbjct: 513 GSERQESFSLEKANESLLKSIN 534 >gi|116495184|ref|YP_806918.1| threonyl-tRNA synthetase [Lactobacillus casei ATCC 334] gi|122263399|sp|Q037Z6|SYT_LACC3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|116105334|gb|ABJ70476.1| Ser-tRNA(Thr) hydrolase [Lactobacillus casei ATCC 334] Length = 657 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 84/446 (18%), Positives = 164/446 (36%), Gaps = 40/446 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + D + L L + + G+ W+P G + I +++ G Sbjct: 232 RRQEAAEHDHRVIGRDLDLF--FVDPKVGAGLPYWMPNGATIRRVIERYIIDKEIADGYE 289 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYR 126 + P L + DL+ SG +D Y ++M D D M P + I+ HI+SYR Sbjct: 290 HVYTPVLANLDLYKTSGHWDHYREDMFPPMDMGDGEMLELRPMNCPSHIQIYNHHIRSYR 349 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP ++ + R E G+ R RE + D ++F + + + K+ + ++ Sbjct: 350 ELPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEE-FKKILRLIMDVY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIIS 244 + R D T+ + D M S DD+ Sbjct: 409 EDFNITDYSFRLS--------------YRDPKNTEKYFDDDEMWTRSQSMLKGAMDDLKL 454 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y D+ + +L ++ +S ++ F ++ + T+ G Sbjct: 455 DYYEAEGEAAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----NLTYVG 503 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG++H M G + + I + +P +AP + LI + + + D Sbjct: 504 KDGEEHRPVMIHR--GIVGTMERFIAYLTEIYKGAFPTWLAPTQAVLIPVN--NDLHLDY 559 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT- 423 +I ++ G V DD E++G + A P V+VG K ++D+ V ++ Sbjct: 560 VNRIKKQMLVAGLRVKVDDRNEKMGYKIREAQTKKIPYTVVVGDKELNDAAVSVRRYGDE 619 Query: 424 ---GIREDMSLEEVINYASHRFSNNR 446 +M ++ ++ + + + Sbjct: 620 HTEEEAGNMFIDALVAEVKNYSRDGK 645 >gi|295397484|ref|ZP_06807567.1| threonine--tRNA ligase [Aerococcus viridans ATCC 11563] gi|294974284|gb|EFG50028.1| threonine--tRNA ligase [Aerococcus viridans ATCC 11563] Length = 656 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 80/445 (17%), Positives = 165/445 (37%), Gaps = 36/445 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ +E RD +L + M++ + G+ WLP G + I +++ Sbjct: 243 FIKQREEAKERDHRKLGKELDIF--MVNPEVGSGLPFWLPKGATIRRIIERYIIDKEVSL 300 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D ++ P + ++++ I Sbjct: 301 GYEHVYTPIMADVELYKTSGHWDHYHEDMFPPMDMGDGEQLVLRPMNCPHHMMVYKNDIH 360 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR P ++ + R E G+ R RE + DA+ F P+ K + ++ Sbjct: 361 SYREFPVRIAELGMMHRYEKSGALSGLQRVREMTLNDAHIFVR-PDQIKEEFTRVIELIK 419 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDD 241 +++ + R D T + D M + DD Sbjct: 420 QVYDDFNITDYRFRLS--------------YRDPNNTDKYFDDDEMWEKAQAMLKEAMDD 465 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y DV ++ +L + +S ++ F ++ T Sbjct: 466 LGLEYFEAIGEAAFYGPKLDV---QMKTALGNEETMSTVQLD----FLLPERFD----LT 514 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + G DG+D + + + G + + + + +P +AP + LI + D+ Sbjct: 515 YVGQDGQDTHRPVVIHR-GVVSTMERFVAYLIEEYKGAFPTWLAPVQAKLIPVN--DEAH 571 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + E+I R+ G V D+ E++G + A P Q++ G ++++ V ++ Sbjct: 572 GEHVEEIRRRMKAAGMRVEVDNRNEKMGYKIREAQTQKIPYQLVFGDNEIAENTVTVRRY 631 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + M +E + + Sbjct: 632 GSKETLSMPFDEFLAQLEQDIKEYK 656 >gi|86137404|ref|ZP_01055981.1| threonyl-tRNA synthetase [Roseobacter sp. MED193] gi|85825739|gb|EAQ45937.1| threonyl-tRNA synthetase [Roseobacter sp. MED193] Length = 648 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 85/442 (19%), Positives = 143/442 (32%), Gaps = 45/442 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD ++ L + + + G W P G K + +R Q R Sbjct: 234 KAHLHMLEEAAKRDHRKLGREMNLY--HMQEEAPGQVFWHPNGWKIYTTLQDYMRRMQER 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G +E++ P + LW SG +D Y + M + R P + +F Sbjct: 292 DGYVEVNTPQVVDRKLWEASGHWDKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQVF 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F D + F + + K Sbjct: 352 NQGLKSYRDLPLRMAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFCAEDQIESET-AKF 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +++ LG + ++ + P S E D + Sbjct: 411 IAFLSKVYADLGFHNWTIKLSTRPEKRIGSDE-----------------SWDLVEKALGD 453 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 ++E A Y + L D++ N + ++ Sbjct: 454 ACKAAGYEYELLEGEGAFYGPKLEF---TLTDAIGRNWQCGTLQVDPNLP--------ER 502 Query: 298 MSATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + A F GADG H + +G+ ++ H GK W S+ Sbjct: 503 LEANFIGADGNKHRPFMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASIT---- 558 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++ L G D E+I + L P+ + +G + V + V Sbjct: 559 --SDADDYVHEVVTELQAAGVRAEADIRNEKINYKVREHSLGKVPVILAIGHREVEERTV 616 Query: 417 EIKHRLTGIREDMSLEEVINYA 438 I+ SLE V Sbjct: 617 SIRRLGEKQTRVDSLENVTKAL 638 >gi|309803316|ref|ZP_07697413.1| threonine--tRNA ligase [Lactobacillus iners LactinV 11V1-d] gi|308164824|gb|EFO67074.1| threonine--tRNA ligase [Lactobacillus iners LactinV 11V1-d] Length = 643 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 73/434 (16%), Positives = 154/434 (35%), Gaps = 36/434 (8%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L L + + G+ W+P G + I +++ G + P L Sbjct: 238 RDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRVIERYIIDKEVADGYQHVYTPVL 295 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y ++M D D M P + I+ HI+SYR LP Sbjct: 296 MNLDAYKTSGHWAHYREDMFPPMDMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIA 355 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + K+ + ++ + Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVELDQVQSE-FAKILKLIMEVYRDFDITD 414 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + F + + + DD+ E Sbjct: 415 YYFRLS-------------YRDPKNTDKYFANDEMWERSQKMLKGAMDDLGLEYVEAEGE 461 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ + ++ G DG++H Sbjct: 462 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----NLSYVGKDGEEHRP 510 Query: 313 -QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + +G M A + + G W + + I ++ + + + + Sbjct: 511 VMVHRGIVGTMERFIAYLTEIYKGAFPTWLA-----PLQVKIIPVNNDAHGEYAQNVKDQ 565 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L K+G D E++G + A P +++G + + V ++ + +E +L Sbjct: 566 LMKLGFRAEVDFRNEKLGYKIREAQTQKVPYTLVLGDDELQHNSVNVRKYGSEDQESKAL 625 Query: 432 EEVINYASHRFSNN 445 E ++ S ++ Sbjct: 626 SEFVSELSADVASY 639 >gi|71899288|ref|ZP_00681449.1| Proline--tRNA ligase [Xylella fastidiosa Ann-1] gi|71730914|gb|EAO32984.1| Proline--tRNA ligase [Xylella fastidiosa Ann-1] Length = 303 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 113/223 (50%), Positives = 151/223 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DAE+ SH+LMLR GMI + + G+Y+W PLG + L V AI+R+E Sbjct: 1 MRLSEFHLHTTKEIPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+EM +PT+Q +LW ES R++ +G ++L++ DR Y PT EE +TD R Sbjct: 61 MNRAGAVEMLLPTIQPRELWEESERWEKFGSQLLKIKDRKQAEYCYSPTAEEAVTDYVRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L+ Y M + Sbjct: 121 ELTSYKQLPVNLYQIQTKFRDEIRPRFGVMRAREFVMKDAYSFHLSDADLVREYENMRAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC 223 Y RIF RLGL+ ++A+SG IGGD S EF V+AD+GE + Sbjct: 181 YTRIFTRLGLEFRSVQADSGAIGGDASQEFHVIADSGEDVLAF 223 >gi|284051766|ref|ZP_06381976.1| prolyl-tRNA synthetase [Arthrospira platensis str. Paraca] Length = 601 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 114/240 (47%), Positives = 152/240 (63%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + G+Y++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLREDPTEAEIPSHKLLLRAGYIRRIGSGVYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N TGA E +P +Q ++LW ESGR+D+Y K M L DR D+++ GPTHEEV+T + Sbjct: 61 MNATGAQECLLPQVQPSELWKESGRWDTYTKAEGIMFSLKDRRDRSLALGPTHEEVITAV 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF + + K +Y M Sbjct: 121 ARDMIRSYQQLPLHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHTSEDSLKQTYQDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y I R GL + A+SG IGG S EF+VLAD GE +V + D + E Sbjct: 181 DRAYRNILRRCGLDFCAVEADSGAIGGSGSQEFMVLADAGEDEVLYTPDG-KYAANVEKA 239 Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 97/172 (56%), Gaps = 1/172 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P SARGIEVGHIF GTKYS M AT+ G+D + MG YG+G R+ A +E Sbjct: 428 PSQTLESARGIEVGHIFQLGTKYSQAMGATYTSETGEDLPLVMGCYGVGVSRLAQAAVEQ 487 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 S++ GIIWP ++AP+ + + D +++Y++L++ G + DD E+ G + Sbjct: 488 SYNKDGIIWPVAIAPYHVIITVPNVSDNQQMAIAQQLYSQLNQAGVETLLDDRNERAGVK 547 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 F ADL+G P +++ G + + KVE+ R ++ +E+V++ + S Sbjct: 548 FKDADLVGIPYRIVTG-RAIKSGKVELVQRADHESSEVPIEQVVSLLQQKIS 598 >gi|209525764|ref|ZP_03274300.1| prolyl-tRNA synthetase [Arthrospira maxima CS-328] gi|209493737|gb|EDZ94056.1| prolyl-tRNA synthetase [Arthrospira maxima CS-328] Length = 601 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 114/240 (47%), Positives = 152/240 (63%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + G+Y++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLREDPTEAEIPSHKLLLRAGYIRRIGSGVYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N TGA E +P +Q ++LW ESGR+D+Y K M L DR D+++ GPTHEEV+T + Sbjct: 61 MNATGAQECLLPQVQPSELWKESGRWDTYTKAEGIMFSLKDRRDRSLALGPTHEEVITAV 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF + + K +Y M Sbjct: 121 ARDMIRSYQQLPLHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHTSEDSLKQTYQDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y I R GL + A+SG IGG S EF+VLAD GE +V + D + E Sbjct: 181 DRAYRNILRRCGLDFCAVEADSGAIGGSGSQEFMVLADAGEDEVLYTPDG-KYAANVEKA 239 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 97/172 (56%), Gaps = 1/172 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P SARGIE+GHIF GTKYS M AT+ G+D + MG YG+G R+ A +E Sbjct: 428 PSQTLESARGIEIGHIFQLGTKYSQAMGATYTSETGEDLPLVMGCYGVGVSRLAQAAVEQ 487 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 S+D GIIWP ++AP+ + + D +++Y++L++ G + DD E+ G + Sbjct: 488 SYDKDGIIWPVAIAPYHVIITVPNVSDNQQMAIAQQLYSQLNQAGVETLLDDRNERAGVK 547 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 F ADL+G P +++ G + + KVE+ R ++ +E+V++ + S Sbjct: 548 FKDADLVGIPYRIVTG-RAIKSGKVELVQRADHESSEVPIEQVVSLLQQKIS 598 >gi|326572669|gb|EGE22658.1| prolyl-tRNA synthetase [Moraxella catarrhalis CO72] Length = 572 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 125/274 (45%), Positives = 171/274 (62%), Gaps = 4/274 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++ L+E P DA+IAS +LMLR G+I + + G+Y W+P+G + L V I+REE Sbjct: 1 MKASQFIFATLKETPNDADIASSQLMLRAGLIRKLASGLYVWMPMGLRVLKRVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + + E+ +P Q +LW ESGR++ YG E+LR DR+ + + GPTHEEV+TDI R+ Sbjct: 61 MEKIDSQELLMPVTQPGELWHESGRWEDYGAELLRFKDRHSRDFVLGPTHEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP TFYQIQ KFRDE+RPRFGVMR+REF MKDAYSF + E ++Y M+ + Sbjct: 121 ELKSYKQLPITFYQIQTKFRDEIRPRFGVMRAREFTMKDAYSFHIDKESLANTYQDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP---SENT 237 Y RIF RLGL ++A++G IGG SHEF VLAD+GE + S D DF +E Sbjct: 181 YNRIFTRLGLNFRAVQADTGSIGGFASHEFHVLADSGEDDIAFSSD-SDFAANIELAEAV 239 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 +D + P T + E L L Sbjct: 240 CYDKRAAPTQARTDVDTPNMTTCEAVAEHLNIPL 273 Score = 160 bits (404), Expect = 5e-37, Method: Composition-based stats. Identities = 68/194 (35%), Positives = 107/194 (55%), Gaps = 8/194 (4%) Query: 253 TAPYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A D N D P+ K V RGIEVGHIF G KYS ++ + G +GK Sbjct: 379 DATITQIVDTRNVVDGDPSPDGKGVISIKRGIEVGHIFQLGDKYSKALNCSVLGKEGKPV 438 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD------SVAPFKISLINIKAHDQVCRDA 364 + MG YGIG R++AA IE +HD GIIW + S+APF ++++ +K+ D Sbjct: 439 TLMMGCYGIGVSRIIAAAIEQNHDDNGIIWAEPEDKADSIAPFYVAIVPMKSKDGDAEAK 498 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + +Y L G +V DD E+ G +FA +L+G P +++V + ++++K E +R TG Sbjct: 499 AQSLYQTLKARGINVLLDDRDERAGVKFADLELIGIPHRIVVSQRNLAENKYEYTNRATG 558 Query: 425 IREDMSLEEVINYA 438 ++ +SL+E++ Sbjct: 559 DQQMLSLDELLALF 572 >gi|326566943|gb|EGE17081.1| prolyl-tRNA synthetase [Moraxella catarrhalis 12P80B1] Length = 572 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 125/274 (45%), Positives = 171/274 (62%), Gaps = 4/274 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++ L+E P DA+IAS +LMLR G+I + + G+Y W+P+G + L V I+REE Sbjct: 1 MKASQFIFATLKETPNDADIASSQLMLRAGLIRKLASGLYVWMPMGLRVLKRVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + + E+ +P Q +LW ESGR++ YG E+LR DR+ + + GPTHEEV+TDI R+ Sbjct: 61 MEKIDSQELLMPVTQPGELWHESGRWEDYGAELLRFKDRHSRDFVLGPTHEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP TFYQIQ KFRDE+RPRFGVMR+REF MKDAYSF + E ++Y M+ + Sbjct: 121 ELKSYKQLPITFYQIQTKFRDEIRPRFGVMRAREFTMKDAYSFHIDKESLANTYQDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP---SENT 237 Y RIF RLGL ++A++G IGG SHEF VLAD+GE + S D DF +E Sbjct: 181 YNRIFTRLGLNFRAVQADTGSIGGFASHEFHVLADSGEDDIAFSSD-SDFAANIELAEAV 239 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 +D + P T + E L L Sbjct: 240 CYDKRAAPTQARTDVDTPNMTTCEAVAEHLNIPL 273 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 67/194 (34%), Positives = 107/194 (55%), Gaps = 8/194 (4%) Query: 253 TAPYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A D+ N D P+ V RGIEVGHIF G KYS ++ + G +GK Sbjct: 379 DATITQIVDIRNVVDGDPSPDGNGVISIKRGIEVGHIFQLGDKYSKALNCSVLGKEGKPV 438 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD------SVAPFKISLINIKAHDQVCRDA 364 + MG YGIG R++AA IE +HD GIIW + S+APF ++++ +K+ D Sbjct: 439 TLMMGCYGIGVSRIIAAAIEQNHDDNGIIWAEPEDKADSIAPFYVAIVPMKSKDGDAEAK 498 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + +Y L G +V DD E+ G +FA +L+G P +++V + ++++K E +R TG Sbjct: 499 AQSLYQTLKARGINVLLDDRDERAGVKFADLELIGIPHRIVVSQRNLAENKYEYTNRATG 558 Query: 425 IREDMSLEEVINYA 438 ++ +SL+E++ Sbjct: 559 DQQMLSLDELLALF 572 >gi|289434600|ref|YP_003464472.1| hypothetical protein lse_1235 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170844|emb|CBH27386.1| proS [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 568 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 124/294 (42%), Positives = 165/294 (56%), Gaps = 5/294 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLTLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAVGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E Y+ M + Sbjct: 121 EIKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATNESLDEVYDLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--- 237 Y IF R GL+ + A+SG IGG + EF+ L+D GE + S D+ E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGKETQEFLALSDIGEDTIAYSD-ASDYAANVEMAPVL 239 Query: 238 -DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 L +E+ T P T L + + + ++ I Sbjct: 240 HMEKKSHELEKELEKVTTPDQKTIADIVTFLEVPIEKTMKSMLYQVDEEVIMVL 293 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 65/180 (36%), Positives = 102/180 (56%), Gaps = 3/180 (1%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ ++ D P+ + V GIEVGHIF GTKYS M+AT +G+ + MG YG Sbjct: 383 DLRMIQVGDLSPDGQGVIKFAEGIEVGHIFKLGTKYSQAMNATVLDENGRAQPIIMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R+++A+ E S+D G++W ++PF + LI + + E +Y L + G Sbjct: 443 IGVSRILSAIAEQSNDENGLVWDKKISPFDLHLIPVNMKSEEQVAFAETLYQSLQQAGFS 502 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G +FA ADL+G P+++ VG K ++ VE+K R TG ++ +E++N Sbjct: 503 VLIDDRSERAGVKFADADLIGLPIRITVGKK-AAEGIVEVKIRKTGEMIEVRQDELLNTL 561 >gi|239618079|ref|YP_002941401.1| prolyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] gi|259511603|sp|C5CFP9|SYP_KOSOT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|239506910|gb|ACR80397.1| prolyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] Length = 581 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 108/254 (42%), Positives = 163/254 (64%), Gaps = 2/254 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ + P L+E P DA++ S KL++R G + +++ G+Y++LPLG + L V I+REE Sbjct: 1 MRFSQLYAPTLKEAPSDADLVSIKLLIRGGFVRKNAAGVYTYLPLGLRVLKKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E+ +P +Q A+LW ESGR+D YG EM++ DR+++ GPTHEE++T I R+ Sbjct: 61 MAAIGCQEILMPIIQPAELWFESGRWDDYGPEMMKFKDRHERDFTLGPTHEELLTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR P + +QI K+RDE+RPRFG++R+REFLMKDAYSF E +Y + + Sbjct: 121 ELRSYRQFPLSLFQIANKYRDEIRPRFGLIRAREFLMKDAYSFHTDWESLDKAYKDFYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RI R+GLK + + A++G IGGD SHEF LADTGE+ + + E ++ Sbjct: 181 YGRIMERIGLKYLVVEADTGAIGGDESHEFNALADTGESTLLYCDCG--YAASDEKAEYM 238 Query: 241 DIISLNSIVEQWTA 254 + + V++ A Sbjct: 239 MLSDEDPDVQEEKA 252 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 95/196 (48%), Gaps = 8/196 (4%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 D+ D P+ +GIE+GHIF GTKYS M+ F +G++H MG Sbjct: 381 EWFDLKLAVEGDPCPKCGKPMKMTKGIELGHIFKLGTKYSEKMNGYFTDENGENHPYIMG 440 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YG G R ++AV+E HD G+IWP S+APF I + + + E++Y L + Sbjct: 441 CYGWGISRTMSAVVEQMHDEHGMIWPLSIAPFHIIITMVNPSQEQISKVGEELYELLKEK 500 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE-- 433 +V DD G +F ADL+G PL++ VG K ++ +E+K R ++S+ E Sbjct: 501 -YEVLLDDRQASPGVKFKDADLIGIPLRITVGKK-LTKGLIELKLRTEKQLVEVSISEGY 558 Query: 434 --VINYASHRFSNNRP 447 V+ P Sbjct: 559 DSVLETVEKLLKKYDP 574 >gi|229552552|ref|ZP_04441277.1| threonine--tRNA ligase [Lactobacillus rhamnosus LMS2-1] gi|258539925|ref|YP_003174424.1| threonyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705] gi|229314104|gb|EEN80077.1| threonine--tRNA ligase [Lactobacillus rhamnosus LMS2-1] gi|257151601|emb|CAR90573.1| Threonyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705] Length = 657 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 79/445 (17%), Positives = 160/445 (35%), Gaps = 38/445 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + RD + L L + + G+ W+P G + I +++ G Sbjct: 232 RRKEAAERDHRVIGRDLDLF--FVDPKVGAGLPYWMPNGATIRRVIERYIIDKEIADGYE 289 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYR 126 + P L + DL+ SG +D Y ++M D D M P + I+ HI+SYR Sbjct: 290 HVYTPVLANLDLYKTSGHWDHYREDMFPPMDMGDGEMLELRPMNCPSHIQIYNHHIRSYR 349 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ + R E ++ + + + + + + K+ + ++ Sbjct: 350 ELPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQEEFKKILRLIMDVYE 409 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIISL 245 + R D T+ + D M S DD+ Sbjct: 410 DFNITDYSFRLS--------------YRDPKNTEKYFDDDEMWTRSQSMLKGAMDDLHLD 455 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y D+ + +L ++ +S ++ F ++ + T+ G Sbjct: 456 YYEAEGEAAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----NLTYVGK 504 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DG++H M G + + I + +P +AP + LI + + + D Sbjct: 505 DGEEHRPVMIHR--GIVGTMERFIAYLTEIYKGAFPTWLAPTQAVLIPVN--NDLHLDYV 560 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT-- 423 +I ++ G V DD E++G + A P V+VG K ++D+ V ++ Sbjct: 561 NRIKRQMQAAGLRVKVDDRNEKMGYKIREAQTKKIPYTVVVGDKELNDAAVSVRRYGDEH 620 Query: 424 --GIREDMSLEEVINYASHRFSNNR 446 +M ++ ++ + + + Sbjct: 621 TEEEAGNMFIDAMVAEVKNYSRDGK 645 >gi|315038857|ref|YP_004032425.1| threonyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112] gi|312276990|gb|ADQ59630.1| threonyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112] Length = 645 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 76/432 (17%), Positives = 152/432 (35%), Gaps = 34/432 (7%) Query: 17 DAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 D L L + + G+ W+P G V I + + G + P L Sbjct: 240 DHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVLM 297 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQ 134 + D + SG + Y +M D D M P + I++ HI+SYR+LP + Sbjct: 298 NLDAYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVAE 357 Query: 135 IQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSI 193 + + R E G+ R RE + D ++F + + K+ + ++ + Sbjct: 358 LGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQDE-FAKILKLIMDVYKDFDITDY 416 Query: 194 PMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT 253 R + F + + + DD+ E Sbjct: 417 YFRLS-------------YRDPKNTEKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGEA 463 Query: 254 APYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 A Y D+ + +L ++ +S ++ F ++ T+ G DG++H Sbjct: 464 AFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----GLTYVGQDGEEHRPV 512 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 M G + + I + +P +AP + +I + + + EK+ L+ Sbjct: 513 MIHR--GIVGTMERFIAYLTEIYKGAFPTWLAPIQAEIIPVN--NDAHGEYAEKVRQELA 568 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 K G D+ E++G + + P +++G + + + V ++ T SL++ Sbjct: 569 KRGFRAEVDNRNEKMGYKIRESQTQKVPYTLVLGDEEMKNGSVNVRRYGTDEEISKSLDD 628 Query: 434 VINYASHRFSNN 445 I + Sbjct: 629 FIKEIDADVKSY 640 >gi|296113641|ref|YP_003627579.1| prolyl-tRNA synthetase [Moraxella catarrhalis RH4] gi|295921335|gb|ADG61686.1| prolyl-tRNA synthetase [Moraxella catarrhalis RH4] gi|326568678|gb|EGE18749.1| prolyl-tRNA synthetase [Moraxella catarrhalis BC7] Length = 572 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 125/274 (45%), Positives = 171/274 (62%), Gaps = 4/274 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++ L+E P DA+IAS +LMLR G+I + + G+Y W+P+G + L V I+REE Sbjct: 1 MKASQFIFATLKETPNDADIASSQLMLRAGLIRKLASGLYVWMPMGLRVLKRVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + + E+ +P Q +LW ESGR++ YG E+LR DR+ + + GPTHEEV+TDI R+ Sbjct: 61 MEKIDSQELLMPVTQPGELWHESGRWEDYGAELLRFKDRHSRDFVLGPTHEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP TFYQIQ KFRDE+RPRFGVMR+REF MKDAYSF + E ++Y M+ + Sbjct: 121 ELKSYKQLPITFYQIQTKFRDEIRPRFGVMRAREFTMKDAYSFHIDKESLANTYQDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP---SENT 237 Y RIF RLGL ++A++G IGG SHEF VLAD+GE + S D DF +E Sbjct: 181 YNRIFTRLGLNFRAVQADTGSIGGFASHEFHVLADSGEDDIAFSSD-SDFAANIELAEAV 239 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 +D + P T + E L L Sbjct: 240 CYDKRAAPTQARTDVDTPNMTTCEAVAEHLNIPL 273 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 68/194 (35%), Positives = 108/194 (55%), Gaps = 8/194 (4%) Query: 253 TAPYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A D+ N D P+ K V RGIEVGHIF G KYS ++ + G +GK Sbjct: 379 DATITQIVDIRNVVDGDPSPDGKGVISIKRGIEVGHIFQLGDKYSKALNCSVLGKEGKPV 438 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD------SVAPFKISLINIKAHDQVCRDA 364 + MG YGIG R++AA IE +HD GIIW + S+APF ++++ +K+ D Sbjct: 439 TLMMGCYGIGVSRIIAAAIEQNHDDNGIIWAEPEDKADSIAPFYVAIVPMKSKDGDAEAK 498 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + +Y L G +V DD E+ G +FA +L+G P +++V + ++++K E +R TG Sbjct: 499 AQSLYQTLKARGINVLLDDRDERAGVKFADLELIGIPHRIVVSQRNLAENKYEYTNRATG 558 Query: 425 IREDMSLEEVINYA 438 ++ +SL+E++ Sbjct: 559 DQQMLSLDELLALF 572 >gi|312875562|ref|ZP_07735563.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2053A-b] gi|311088816|gb|EFQ47259.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2053A-b] Length = 643 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 73/434 (16%), Positives = 154/434 (35%), Gaps = 36/434 (8%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L L + + G+ W+P G + I +++ G + P L Sbjct: 238 RDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRVIERYIIDKEVADGYQHVYTPVL 295 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y ++M D D M P + I+ HI+SYR LP Sbjct: 296 MNLDAYKTSGHWAHYREDMFPPMDMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIA 355 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + K+ + ++ + Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVELDQVQSE-FAKILKLIMEVYRDFDITD 414 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + F + + + DD+ E Sbjct: 415 YYFRLS-------------YRDPKNTDKYFANDEMWERSQKMLKGAMDDLGLEYVEAEGE 461 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ + ++ G DG++H Sbjct: 462 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----NLSYVGKDGEEHRP 510 Query: 313 -QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + +G M A + + G W + + I ++ + + + + Sbjct: 511 VMVHRGIVGTMERFIAYLTEIYKGAFPTWLA-----PLQVKIIPVNNDAHGEYAQNVKDQ 565 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L K+G D E++G + A P +++G + + V ++ + +E +L Sbjct: 566 LMKLGFRAEVDFRNEKLGYKIREAQTQKVPYTLVLGDDELQHNSVNVRKYGSEDQESKAL 625 Query: 432 EEVINYASHRFSNN 445 E ++ S ++ Sbjct: 626 SEFVSELSADVASY 639 >gi|108758923|ref|YP_631780.1| threonyl-tRNA synthetase [Myxococcus xanthus DK 1622] gi|122981032|sp|Q1D6E3|SYT_MYXXD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|108462803|gb|ABF87988.1| threonyl-tRNA synthetase [Myxococcus xanthus DK 1622] Length = 642 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 71/443 (16%), Positives = 137/443 (30%), Gaps = 42/443 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y I + RD +L L H +S G W P G ++ +R+ Sbjct: 234 LAEYLTRIEESKKRDHRKLGKELDLF--HFHPYSPGSAFWTPKGTTLYTTLSNWMRQLTQ 291 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRN--DKAMIYGPTHEEVMTDIFRS 120 G +E+ P + + LW SG + Y + M + D + P + + Sbjct: 292 NDGYVEIKTPLMFNKGLWETSGHWGKYKENMFLVLDSESGEHDFSLKPMNCPSHHLFYGF 351 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 SYR+LP ++ + R+E G+ R R+F DA+ + + + + FV Sbjct: 352 KKHSYRDLPLRYHTQDVLHRNEAAGSLGGLTRVRQFAQDDAHIYCTEAQITDE--VRRFV 409 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L ++ + ++ + P D Sbjct: 410 KLLDHVYKAVGLTYAVKLSTRPEQR-----------------LGDDSLWDRAEGGLKAAL 452 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + + A Y D + DS+ ++ ++ Sbjct: 453 ESLGLEYELAPGDGAFYGPKIDF---AVSDSIGRRWQLGTMQLDYLAP--------ERFD 501 Query: 300 ATFKGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 T+ G D +H + G+ A++ G W + Sbjct: 502 LTYVGEDNAEHRPVVLHRAIFGSFERFTAILIEHFAGAFPAW------LAPIQAVLVTVA 555 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D K+ L G V +D+ G + ++ A L P ++VG VS V Sbjct: 556 DRQNDYARKVRDSLRAKGYRVEFDERGLSMNAKIREAQLQKVPFTLVVGDNEVSGEGVSP 615 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + M + + + Sbjct: 616 RRYGGEDLKTMKVTDFEALLAKE 638 >gi|281211698|gb|EFA85860.1| threonyl-tRNA synthetase [Polysphondylium pallidum PN500] Length = 730 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 67/431 (15%), Positives = 145/431 (33%), Gaps = 32/431 (7%) Query: 17 DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS 76 D L H +S G +LP G + + +++ +R E + G E+ P + S Sbjct: 331 DHRNIGRDQELF--FFHPYSPGSCFFLPHGTRIYNKLHSFLRSEYRKRGFEEVITPNIYS 388 Query: 77 ADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 LW SG + +Y M + + P + +F SY++LP Sbjct: 389 QKLWETSGHWQNYKDNMF-GFQCDHTSYSLKPMNCPGHCLMFAHKSHSYKDLPMRIADFG 447 Query: 137 LKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 + R+E G+ R R F DA+ F + + K ++ + G + Sbjct: 448 VLHRNETHGSLTGLTRVRRFQQDDAHIFCRADQIREE-IQKCLEFMQFVYDKFGFSFS-L 505 Query: 196 RAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP 255 + P D + S + ++ + A Sbjct: 506 ELSTRPTPF-----------------LGDVDMWNRAEASLESVLNEFGREWRVNPGDGAF 548 Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 Y D+H + D+ ++ + + ++ F ++ L +A + + + Sbjct: 549 YGPKIDIH---IKDANGKSHQCATIQLD----FQLPIRFGLEYTAA--DSRAERPVMIHR 599 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 + R++A +IE + + +N D + RL Sbjct: 600 AIFGSTERMMAILIEHTKGKWPLWLSPRQIFIAPVSVNSDGSGGPYNDYLNAVKQRLFDA 659 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G + D + I + A L + V++G + ++ + I+ R + + ++L++ + Sbjct: 660 GYHIDSDLSDKTINKKLREAITLRYNYLVVIGKEEQDNNTITIRRRDSTDQITLTLDKFL 719 Query: 436 NYASHRFSNNR 446 + N + Sbjct: 720 EELNDNIINFK 730 >gi|304436529|ref|ZP_07396502.1| proline--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370472|gb|EFM24124.1| proline--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 569 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 119/285 (41%), Positives = 164/285 (57%), Gaps = 2/285 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + + P L+ P +AEIASH+LM R G+I + + G+Y++LPL + + + IIREE Sbjct: 1 MRATNLYAPTLRNTPAEAEIASHQLMYRAGLIRKSAGGMYTYLPLAWRTIRKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P LQ ++LW ESGR+ +YG EM+ + DR+ + GPTHEE++T + R Sbjct: 61 MDAAGGQEIMMPILQPSELWEESGRWGAYGAEMICVKDRHGREFCMGPTHEEMITALVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ KFRDE RPRFGVMRSREF+MKD YSFD G SY KM V+ Sbjct: 121 EVRSYKQLPLMLYQIQDKFRDERRPRFGVMRSREFIMKDLYSFDKDIAGMNESYRKMAVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP--IPSENTD 238 Y IF R GL + A+SG IGG S EF VLA GE+++ C + Sbjct: 181 YTNIFTRCGLNFRAVEADSGAIGGGHSEEFTVLAPEGESRIACCDACSYAASDEKAALRP 240 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 D +E+ P A T + E L + + + A E Sbjct: 241 IDAAAEEALPLEKVATPDAHTIAMLAEYLRIPVEKTIKAVAYQTE 285 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 70/218 (32%), Positives = 105/218 (48%) Query: 226 DFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 M + N I++N + + V L S RGIE G Sbjct: 350 MRMHNAVSGANEQDFHYINVNPQRDFGSVTVTDIRLVAEGDLCPSCGVGHLHIGRGIEAG 409 Query: 286 HIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 IF GTKYS M ATF GK +QMG YGIG R +AA IE +HD GIIWP ++A Sbjct: 410 QIFALGTKYSEAMGATFLDESGKTQPLQMGCYGIGVGRTMAAAIEQNHDAHGIIWPRAIA 469 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405 P+++ ++ + A + E+IY L G DV DD E+ G +F DL+G+P+++ Sbjct: 470 PYEVVVVAVNAKVEEQLAYAEEIYEELRAAGVDVLLDDRRERAGVKFNDCDLIGYPVRIA 529 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 +G K + + +E+K R +G D + + + + Sbjct: 530 IGPKTIENGTIEVKIRQSGELVDFARDTYLKGVKDMLA 567 >gi|291450340|ref|ZP_06589730.1| threonyl-tRNA synthetase [Streptomyces albus J1074] gi|291353289|gb|EFE80191.1| threonyl-tRNA synthetase [Streptomyces albus J1074] Length = 660 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 63/439 (14%), Positives = 134/439 (30%), Gaps = 35/439 (7%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + G+ + P G + R G ++ Sbjct: 255 EAEKRDHRKLGTELDLFS-FPDELGPGLAVFHPKGGVVRKEMENYSRRRHEDAGYEFVNT 313 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + L+ SG +Y + M + + + + + IF+ +SYR LP Sbjct: 314 PHISKEHLFETSGHLPNYSEGMFPPIEFDGQNYRLKAMNCPMHNLIFKGRGRSYRELPLR 373 Query: 132 FYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 ++ +R E G+ RSR F D++ + + + + + L + GL Sbjct: 374 LFEFGTVYRYEKSGVVHGLTRSRGFTQDDSHIYCTKEQMPEEL-DSLLTFVLDLLRDYGL 432 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + + D + + + + Sbjct: 433 NQFELELSTR--------------DPESDKFIGEDAEWEEATEALRQAAEKQGLPLVPDP 478 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y + + D++ + ++S ++ FG + ADG Sbjct: 479 GGAAYYGPKI---SVQAKDAIGRSWQMSTIQVDFQQPKRFG--------LEYTAADGSRQ 527 Query: 311 YV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + G++ AV+ + +P +AP + I I ++ Sbjct: 528 QPVMIHRALFGSIERFFAVLL---EHYAGAFPAWLAPVQAVGIPIG---DAHVSYLQEFA 581 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 A G V D +++ + P +IVG + ++ V ++R + Sbjct: 582 ADAKARGLRVEVDSSSDRMQKKIRNHQKAKVPFMIIVGDEDMNAGTVSFRYRDGSQENGI 641 Query: 430 SLEEVINYASHRFSNNRPV 448 E+ + V Sbjct: 642 PREDALAKLQDVVERRVQV 660 >gi|83816191|ref|YP_446893.1| threonyl-tRNA synthetase [Salinibacter ruber DSM 13855] gi|83757585|gb|ABC45698.1| threonyl-tRNA synthetase [Salinibacter ruber DSM 13855] Length = 694 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 74/441 (16%), Positives = 142/441 (32%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + + RD +L L T Q G+ WLP G + ++++EQ + G Sbjct: 276 FLERRRKAKERDHRKLGTELNLFTFDTEQVGPGLPMWLPKGTTLRQTLQEVLQQEQVKQG 335 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------DRNDKAMIYGPTHEEVMTDIFR 119 + P + DL+ SG Y Y + D + + P + I++ Sbjct: 336 YKPVCTPHIGRLDLYRTSGHYPHYEDDQFPPMVTGEGDDGEEDGYLLKPMNCPHHVKIYQ 395 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + SYR+LP + +R E G+ R R F DA+ F TP K + + Sbjct: 396 NDHHSYRDLPVRLAEFGTVYRQEQTGELGGLTRVRGFTQDDAHIFC-TPAQVKDEFKSVI 454 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPSENT 237 L++ LG + + D +T+ + Sbjct: 455 DLTLKVLDALGFEEFEAQISLR--------------DPDDTEKYTGRDALWTRAEQDIRE 500 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + A Y D E D+L ++ ++ Sbjct: 501 AVAETDLDAYEEPGEAAFYGPKLDFMVE---DALGRAWQLGTIQVDYNLP--------ER 549 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 T+ + + G++ V+ G W +AP ++ +I + Sbjct: 550 FELTYVDEHDERKRPVMIHRAPFGSLERFIGVLIEHCGGNFPTW---LAPTQVQIIPVG- 605 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D +++ A L V D E +G + A+ P ++VG V Sbjct: 606 --DDFVDYAQEVAATLRAEDVRVEIDTSDETVGYKIREAETQKVPYMLVVGGDEEEAGTV 663 Query: 417 EIKHRLTGIREDMSLEEVINY 437 ++ G + +S+++ ++ Sbjct: 664 SVRSHADGPQGTVSVQDFLDR 684 >gi|254487235|ref|ZP_05100440.1| threonyl-tRNA synthetase [Roseobacter sp. GAI101] gi|214044104|gb|EEB84742.1| threonyl-tRNA synthetase [Roseobacter sp. GAI101] Length = 648 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 81/442 (18%), Positives = 144/442 (32%), Gaps = 45/442 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + L +L+E RD ++ L + + + G W P G + +R +Q Sbjct: 234 RAHLNMLEEAAKRDHRKLGREMDLF--HMQEEAPGQVFWHPNGWLIYTQLQDYMRRKQRA 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G +E++ P + LW +SG +D Y M + R P + IF Sbjct: 292 GGYVEVNTPQVVDRKLWEKSGHWDKYQDHMFIVEVDEEHAREKSVNALKPMNCPCHVQIF 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F D + F + + Sbjct: 352 NQGMKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCR-EDQIEEETLIY 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 I+ LG ++ ++ P S E D + + Sbjct: 411 IEFLSAIYKDLGFENFKVKFSDRPDTRAGSDE-----------------VWDKAEAALLS 453 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 I A Y + L D++ + + ++ F + Sbjct: 454 ATRKAGIEPEINPGEGAFYGPKLEF---VLTDAIGRDWQCGTHQVD----FVLPER---- 502 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + ATF G+DG H + +G+ ++ H GK W S+ Sbjct: 503 LDATFVGSDGAKHRPVMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASIT---- 558 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++ L+ G D E+I + + P+ + VG++ V + V Sbjct: 559 --SEADDYVREVIETLTAAGVRAEADTRNEKINYKVREHSVGKVPVILAVGAREVEEKTV 616 Query: 417 EIKHRLTGIREDMSLEEVINYA 438 ++ SL +V Sbjct: 617 SVRRLGEKQTSVQSLADVAAAL 638 >gi|326559635|gb|EGE10049.1| prolyl-tRNA synthetase [Moraxella catarrhalis 7169] gi|326560025|gb|EGE10420.1| prolyl-tRNA synthetase [Moraxella catarrhalis 46P47B1] gi|326562507|gb|EGE12824.1| prolyl-tRNA synthetase [Moraxella catarrhalis 103P14B1] gi|326567687|gb|EGE17793.1| prolyl-tRNA synthetase [Moraxella catarrhalis BC1] gi|326574268|gb|EGE24216.1| prolyl-tRNA synthetase [Moraxella catarrhalis 101P30B1] gi|326575054|gb|EGE24983.1| prolyl-tRNA synthetase [Moraxella catarrhalis O35E] Length = 572 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 125/274 (45%), Positives = 171/274 (62%), Gaps = 4/274 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++ L+E P DA+IAS +LMLR G+I + + G+Y W+P+G + L V I+REE Sbjct: 1 MKASQFIFATLKETPNDADIASSQLMLRAGLIRKLASGLYVWMPMGLRVLKRVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + + E+ +P Q +LW ESGR++ YG E+LR DR+ + + GPTHEEV+TDI R+ Sbjct: 61 MEKIDSQELLMPVTQPGELWHESGRWEDYGAELLRFKDRHSRDFVLGPTHEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP TFYQIQ KFRDE+RPRFGVMR+REF MKDAYSF + E ++Y M+ + Sbjct: 121 ELKSYKQLPITFYQIQTKFRDEIRPRFGVMRAREFTMKDAYSFHIDKESLANTYQDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP---SENT 237 Y RIF RLGL ++A++G IGG SHEF VLAD+GE + S D DF +E Sbjct: 181 YNRIFTRLGLNFRAVQADTGSIGGFASHEFHVLADSGEDDIAFSSD-SDFAANIELAEAV 239 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 +D + P T + E L L Sbjct: 240 CYDKRAAPTQARTDVDTPNMTTCEAVAEHLNIPL 273 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 68/194 (35%), Positives = 108/194 (55%), Gaps = 8/194 (4%) Query: 253 TAPYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A D+ N D P+ K V RGIEVGHIF G KYS ++ + G +GK Sbjct: 379 DATITQIVDIRNVVDGDPSPDGKGVISIKRGIEVGHIFQLGDKYSKALNCSVLGKEGKPV 438 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD------SVAPFKISLINIKAHDQVCRDA 364 + MG YGIG R++AA IE +HD GIIW + S+APF ++++ +K+ D Sbjct: 439 TLMMGCYGIGVSRIIAAAIEQNHDDNGIIWAEPEDKADSIAPFYVAIVPMKSKDGDAEAK 498 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + +Y L G +V DD E+ G +FA +L+G P +++V + ++++K E +R TG Sbjct: 499 AQSLYQTLKARGINVLLDDRDERAGVKFADLELIGIPHRIVVSQRNLAENKYEYTNRATG 558 Query: 425 IREDMSLEEVINYA 438 ++ +SL+E++ Sbjct: 559 DQQMLSLDELLALF 572 >gi|319763197|ref|YP_004127134.1| threonyl-tRNA synthetase [Alicycliphilus denitrificans BC] gi|330825391|ref|YP_004388694.1| threonyl-tRNA synthetase [Alicycliphilus denitrificans K601] gi|317117758|gb|ADV00247.1| threonyl-tRNA synthetase [Alicycliphilus denitrificans BC] gi|329310763|gb|AEB85178.1| threonyl-tRNA synthetase [Alicycliphilus denitrificans K601] Length = 639 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 84/442 (19%), Positives = 143/442 (32%), Gaps = 37/442 (8%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L I +HS G W P G V +R G Sbjct: 231 YLHMLEEAEKRDHRRLGRELDLF--HIDEHSPGTVFWHPKGWTLWQEVEQYMRRVYRDNG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D Y + M + + + P + IF+ IKSY Sbjct: 289 YQEVKAPQILDKSLWEKTGHWDKYRENMF-VTESEKRDYALKPMNCPGHILIFKQGIKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R+E G+MR R F D + F + R+ Sbjct: 348 RDLPLRYGEFGQCHRNEPTGGLHGIMRVRGFTQDDGHIFCTEDQIQHEVLAFTR-LLQRV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I + + P S E D + Sbjct: 407 YQDFGFTDIVYKVATRPDARIGSDE-----------------IWDKAEAALIESLKASGC 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I A Y + L D++ + + ++ + A + G Sbjct: 450 DFEISPGEGAFYGPKIEY---TLKDAIGRHWQCGTIQVDFSMP--------ERLDAEYVG 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG H + +G++ ++ H G +W L A CR+ Sbjct: 499 EDGGRHRPVMLHRAIVGSLERFIGILIEQHAGALPVWL--APVQVAVLNITDAQSDYCRE 556 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L V D E+I + L P ++ G K + V ++ R Sbjct: 557 IAAKLQKALPHQDLRVVQDLRNEKITYKIREHALQKLPYILVAGDKEKAAGAVAVRARGN 616 Query: 424 GIREDMSLEEVINYASHRFSNN 445 MSL+ + + ++ Sbjct: 617 KDLGVMSLDAFVELIARDIASK 638 >gi|325295715|ref|YP_004282229.1| Prolyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066163|gb|ADY74170.1| Prolyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 576 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 116/253 (45%), Positives = 169/253 (66%), Gaps = 1/253 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F+P ++E+P DAEI SHKL++R G I + + G+Y LPLG K L + +IREE Sbjct: 1 MRFSRAFIPTMKESPADAEIPSHKLLIRAGFIRKKASGLYDILPLGVKVLLKIEKVIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P + A+LW+ESGR+D YGKEM++ DR+D+ GPT EE++TD+ R Sbjct: 61 MNKAGAQEVILPIMHPAELWIESGRWDVYGKEMIKFKDRHDRDYALGPTAEEMITDLVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP YQI KFRDE+RPRFG+MR+REF+MKDAYSF + E ++ Y M+ + Sbjct: 121 EVKSYKDLPLNLYQIGRKFRDEIRPRFGLMRAREFIMKDAYSFHASNEDAEREYWNMYET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF ++GL + A++G IGG SHEF+V+ADTGE ++ + + +E + Sbjct: 181 YSRIFRKMGLVFKAVEADTGEIGGKFSHEFMVIADTGEGKLVYCEKC-GYAASTEKAEQK 239 Query: 241 DIISLNSIVEQWT 253 + S E + Sbjct: 240 EPKVPESRKENFK 252 Score = 173 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 77/190 (40%), Positives = 104/190 (54%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 D K D P+ + RGIEVGHIF GTKYS M+ATF DGK+ + Sbjct: 378 VTEFVDFAEVKGEDPCPKCAAPLIEKRGIEVGHIFKLGTKYSQAMNATFVDEDGKEKPMV 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG RV+AA +E ++D GIIWP +APF++ +I + + + E IY L Sbjct: 438 MGCYGIGVTRVMAAAVEQNYDENGIIWPVEIAPFEVIVIPVNVKKEEIIETAENIYDELQ 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 K G DV DD + G +F ADL+G P Q+IVG K + VEIK R TG R ++++ + Sbjct: 498 KNGFDVAIDDRNARPGFKFKDADLIGIPYQIIVGKK-AGEGVVEIKVRKTGERFEIAVNK 556 Query: 434 VINYASHRFS 443 V+ Sbjct: 557 VVEKIGELVR 566 >gi|84496326|ref|ZP_00995180.1| threonyl-tRNA synthetase [Janibacter sp. HTCC2649] gi|84383094|gb|EAP98975.1| threonyl-tRNA synthetase [Janibacter sp. HTCC2649] Length = 661 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 68/439 (15%), Positives = 134/439 (30%), Gaps = 32/439 (7%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + G+ + P G + +R G + Sbjct: 253 EAEKRDHRKLGAELDLFS-FPDELGSGLPVFHPKGGVIKREMEDYVRRRHIEEGFDYVGT 311 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + L+ SG Y M + + + IF S +SYR LP Sbjct: 312 PHISKDGLFHTSGHLPYYADTMFPPMEFEGSKYQLKAMNCPMHNLIFSSRGRSYRELPLR 371 Query: 132 FYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 F++ +R E G+ R R D++S+ + + L + GL Sbjct: 372 FFEFGSVYRYEKSGVVHGLTRVRGMTQDDSHSYVTAEQAPAE-IKHLLDFVLSLLRDFGL 430 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + + + G+ S +FI + + D Sbjct: 431 EDFYLELSTRDTEGEKSAKFIGSDEQ-----------WEVATSVLEKVATDSGLELVADP 479 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y + + D++ ++S + FG ++ +DG Sbjct: 480 GGAAFYGPKI---SVQARDAIGRTWQMSTIQYDFNQPERFG--------LEYQASDGSRQ 528 Query: 311 YV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + S G++ V+ + G +W V + + D + Sbjct: 529 QPVMIHSAKFGSIERFFGVLVEHYAGAFPVWLSPVQVLGLPVA------DEYNDYLWDVL 582 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +++ G V DD ++ + A P +I G S++ V ++R + + Sbjct: 583 SQMKAKGIRVELDDSDDRFPKKIRNASKAKVPFALIAGEDDRSNNAVSFRYRDGSQKNGV 642 Query: 430 SLEEVINYASHRFSNNRPV 448 +E+ I V Sbjct: 643 PIEDAIAEVLTAIETRAQV 661 >gi|326568855|gb|EGE18925.1| prolyl-tRNA synthetase [Moraxella catarrhalis BC8] Length = 572 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 125/274 (45%), Positives = 171/274 (62%), Gaps = 4/274 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++ L+E P DA+IAS +LMLR G+I + + G+Y W+P+G + L V I+REE Sbjct: 1 MKASQFIFATLKETPNDADIASSQLMLRAGLIRKLASGLYVWMPMGLRVLKRVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + + E+ +P Q +LW ESGR++ YG E+LR DR+ + + GPTHEEV+TDI R+ Sbjct: 61 MEKIDSQELLMPVTQPGELWHESGRWEDYGAELLRFKDRHSRDFVLGPTHEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP TFYQIQ KFRDE+RPRFGVMR+REF MKDAYSF + E ++Y M+ + Sbjct: 121 ELKSYKQLPITFYQIQTKFRDEIRPRFGVMRAREFTMKDAYSFHIDKESLANTYQDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP---SENT 237 Y RIF RLGL ++A++G IGG SHEF VLAD+GE + S D DF +E Sbjct: 181 YNRIFTRLGLNFRAVQADTGSIGGFASHEFHVLADSGEDDIAFSSD-SDFAANIELAEAV 239 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 +D + P T + E L L Sbjct: 240 CYDKRAAPTQARTDVDTPNMTTCEAVAEHLNIPL 273 Score = 160 bits (404), Expect = 5e-37, Method: Composition-based stats. Identities = 67/194 (34%), Positives = 108/194 (55%), Gaps = 8/194 (4%) Query: 253 TAPYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A D+ N D P+ K + RGIEVGHIF G KYS ++ + G +GK Sbjct: 379 DATITQIVDIRNVVDGDPSPDGKGIISIKRGIEVGHIFQLGDKYSKALNCSVLGKEGKPV 438 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD------SVAPFKISLINIKAHDQVCRDA 364 + MG YGIG R++AA IE +HD GIIW + S+APF ++++ +K+ D Sbjct: 439 TLMMGCYGIGVSRIIAAAIEQNHDDNGIIWAEPEDKADSIAPFYVAIVPMKSKDGDAEAK 498 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + +Y L G +V DD E+ G +FA +L+G P +++V + ++++K E +R TG Sbjct: 499 AQSLYQTLKARGINVLLDDRDERAGVKFADLELIGIPHRIVVSQRNLAENKYEYTNRATG 558 Query: 425 IREDMSLEEVINYA 438 ++ +SL+E++ Sbjct: 559 DQQMLSLDELLALF 572 >gi|254992869|ref|ZP_05275059.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J2-064] Length = 568 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 125/289 (43%), Positives = 164/289 (56%), Gaps = 18/289 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E YN M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ------------------VF 222 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE ++ Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDXXXXXXXXXXXXNTEMAPVLY 240 Query: 223 CSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 K + E D S+ IVE P T ++ D + Sbjct: 241 MEKKSHELEKDMEKVATPDQKSIADIVEFLEVPIEKTMKSMLYQVDDEV 289 Score = 165 bits (417), Expect = 2e-38, Method: Composition-based stats. Identities = 65/180 (36%), Positives = 101/180 (56%), Gaps = 3/180 (1%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ ++ D P+ + V GIEVGHIF GTKYS M+AT +G+ + MG YG Sbjct: 383 DLRMIQVGDLSPDGQGVIKFAEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R+++A+ E S+D G +W ++PF + LI + + E +Y+ L G Sbjct: 443 IGVSRILSAIAEQSNDENGFVWDKQISPFDLHLIPVNMKSEEQVAFAETLYSSLQDAGFS 502 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G +FA ADL+G P+++ VG K ++ VE+K R TG ++ +E++N Sbjct: 503 VLIDDRAERAGVKFADADLIGLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDELLNTL 561 >gi|150007315|ref|YP_001302058.1| threonyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503] gi|255014060|ref|ZP_05286186.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_7] gi|256839604|ref|ZP_05545113.1| threonyl-tRNA synthetase [Parabacteroides sp. D13] gi|166225472|sp|A6L9S2|SYT_PARD8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|149935739|gb|ABR42436.1| threonyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503] gi|256738534|gb|EEU51859.1| threonyl-tRNA synthetase [Parabacteroides sp. D13] Length = 651 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 74/446 (16%), Positives = 141/446 (31%), Gaps = 40/446 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD ++ L KG+ WLP G + +R Q R Sbjct: 230 EYLTLLEEAKKRDHRKIGKEMDLFM-FSDTVGKGLPMWLPKGTALRLRLQEFLRRIQARY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + L++ SG Y YGK+ + + P + I+++ Sbjct: 289 NYQEVMCPPIGNKLLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F + + + + Sbjct: 349 RSYKDLPLRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKQE-FLNVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + ++ + D + + D + + Sbjct: 408 SIVFKTMNFENFEAQISLR--------------DKVNREKYIGSDENWEKAEQAIVEACE 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + +E A Y D + D++ ++ ++ Sbjct: 454 EKGLKAKIEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFQL 502 Query: 301 TFKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + GAD + H M R VA +IE + + Sbjct: 503 EYTGADNQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLWLTPEQVCIMPI-------S 555 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + D +I L DD E+IG + +L P +IVG K +S+V + Sbjct: 556 EKFNDYAWQIARELGNQEIRAIVDDRNEKIGRKIRDNELKRIPYMLIVGEKEAENSEVSV 615 Query: 419 KHRLTGIREDMSLEEVINYASHRFSN 444 + + G + M + + Sbjct: 616 RKQGEGDKGSMKIATFAALLNGEVEE 641 >gi|93005293|ref|YP_579730.1| prolyl-tRNA synthetase [Psychrobacter cryohalolentis K5] gi|114152235|sp|Q1QDK7|SYP_PSYCK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|92392971|gb|ABE74246.1| prolyl-tRNA synthetase [Psychrobacter cryohalolentis K5] Length = 572 Score = 230 bits (585), Expect = 5e-58, Method: Composition-based stats. Identities = 112/235 (47%), Positives = 160/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++ L+E P DA+IAS +LM+R G+I + + G+Y WLP+G + L V I+REE Sbjct: 1 MKASQFLFATLKETPSDADIASSQLMVRAGLIRKIASGLYIWLPMGLRVLQKVERIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P Q A+LW +GR++ YG E+LR DR+D+ + GPTHEEV+T++ + Sbjct: 61 MQNIGAQEVLMPMTQPAELWQLTGRFNDYGPELLRFKDRHDRDFVLGPTHEEVITNLAQG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP TF+QIQ KFRDE+RPRFGVMR+REF MKDAYSF + +Y++M+ + Sbjct: 121 ELRSYKQLPITFFQIQNKFRDEIRPRFGVMRAREFTMKDAYSFHVDQASLAKTYDEMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL ++A++G IGG SHEF VLAD+GE + S ++ E Sbjct: 181 YTRIFTRLGLDFRAVQADTGSIGGFASHEFHVLADSGEDDIAFSDS-SEYAANVE 234 Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 106/199 (53%), Gaps = 8/199 (4%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A D+ N D P+ K RGIEVGHIF G KYS M+ T G DGK Sbjct: 374 ERDAHITRIVDIRNVHEGDPSPDGKGTLQIKRGIEVGHIFQLGDKYSQAMNCTVSGEDGK 433 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA------PFKISLINIKAHDQVCR 362 + MG YGIG R++AA IE ++D GI+WP + PF+++++ +K+ + Sbjct: 434 PVTLMMGCYGIGVSRIIAAAIEQNNDENGIMWPSTPDISDSLAPFEVAIVPMKSKEDTVM 493 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +Y L +G +V DD E+ G +FA +L+G P +++V + +++ K E +R Sbjct: 494 ETATALYEELKALGINVLLDDRNERPGVKFADLELIGIPHRIVVSDRNLAEDKYEYVNRR 553 Query: 423 TGIREDMSLEEVINYASHR 441 ++ +S +EVI S + Sbjct: 554 DSEKQLLSRDEVIAKVSGK 572 >gi|312871712|ref|ZP_07731800.1| threonine--tRNA ligase [Lactobacillus iners LEAF 3008A-a] gi|312872982|ref|ZP_07733042.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1] gi|312874225|ref|ZP_07734259.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2052A-d] gi|315653646|ref|ZP_07906566.1| threonine--tRNA ligase [Lactobacillus iners ATCC 55195] gi|325912186|ref|ZP_08174584.1| threonine--tRNA ligase [Lactobacillus iners UPII 143-D] gi|329920107|ref|ZP_08276938.1| threonine--tRNA ligase [Lactobacillus iners SPIN 1401G] gi|311090295|gb|EFQ48705.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2052A-d] gi|311091504|gb|EFQ49888.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1] gi|311092654|gb|EFQ51010.1| threonine--tRNA ligase [Lactobacillus iners LEAF 3008A-a] gi|315489008|gb|EFU78650.1| threonine--tRNA ligase [Lactobacillus iners ATCC 55195] gi|325476136|gb|EGC79304.1| threonine--tRNA ligase [Lactobacillus iners UPII 143-D] gi|328936561|gb|EGG33005.1| threonine--tRNA ligase [Lactobacillus iners SPIN 1401G] Length = 643 Score = 230 bits (585), Expect = 5e-58, Method: Composition-based stats. Identities = 73/434 (16%), Positives = 154/434 (35%), Gaps = 36/434 (8%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L L + + G+ W+P G + I +++ G + P L Sbjct: 238 RDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRVIERYIIDKEVADGYQHVYTPVL 295 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y ++M D D M P + I+ HI+SYR LP Sbjct: 296 MNLDAYKTSGHWAHYREDMFPPMDMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIA 355 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + K+ + ++ + Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVELDQVQSE-FAKILKLIMEVYRDFDITD 414 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + F + + + DD+ E Sbjct: 415 YYFRLS-------------YRDPKNTDKYFANDEMWERSQKMLKGAMDDLGLEYVEAEGE 461 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ + ++ G DG++H Sbjct: 462 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----NLSYVGKDGEEHRP 510 Query: 313 -QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + +G M A + + G W + + I ++ + + + + Sbjct: 511 VMVHRGIVGTMERFIAYLTEIYKGAFPTWLA-----PLQVKIIPVNNDAHGEYAQNVKDQ 565 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L K+G D E++G + A P +++G + + V ++ + +E +L Sbjct: 566 LMKLGFRAEVDFRNEKLGYKIREAQTQKVPYTLVLGDDELQHNSVNVRKYGSEDQESKAL 625 Query: 432 EEVINYASHRFSNN 445 E ++ S ++ Sbjct: 626 SEFVSELSADVASY 639 >gi|239978444|ref|ZP_04700968.1| threonyl-tRNA synthetase [Streptomyces albus J1074] Length = 655 Score = 230 bits (585), Expect = 5e-58, Method: Composition-based stats. Identities = 63/439 (14%), Positives = 134/439 (30%), Gaps = 35/439 (7%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + G+ + P G + R G ++ Sbjct: 250 EAEKRDHRKLGTELDLFS-FPDELGPGLAVFHPKGGVVRKEMENYSRRRHEDAGYEFVNT 308 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + L+ SG +Y + M + + + + + IF+ +SYR LP Sbjct: 309 PHISKEHLFETSGHLPNYSEGMFPPIEFDGQNYRLKAMNCPMHNLIFKGRGRSYRELPLR 368 Query: 132 FYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 ++ +R E G+ RSR F D++ + + + + + L + GL Sbjct: 369 LFEFGTVYRYEKSGVVHGLTRSRGFTQDDSHIYCTKEQMPEEL-DSLLTFVLDLLRDYGL 427 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + + D + + + + Sbjct: 428 NQFELELSTR--------------DPESDKFIGEDAEWEEATEALRQAAEKQGLPLVPDP 473 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y + + D++ + ++S ++ FG + ADG Sbjct: 474 GGAAYYGPKI---SVQAKDAIGRSWQMSTIQVDFQQPKRFG--------LEYTAADGSRQ 522 Query: 311 YV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + G++ AV+ + +P +AP + I I ++ Sbjct: 523 QPVMIHRALFGSIERFFAVLL---EHYAGAFPAWLAPVQAVGIPIG---DAHVSYLQEFA 576 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 A G V D +++ + P +IVG + ++ V ++R + Sbjct: 577 ADAKARGLRVEVDSSSDRMQKKIRNHQKAKVPFMIIVGDEDMNAGTVSFRYRDGSQENGI 636 Query: 430 SLEEVINYASHRFSNNRPV 448 E+ + V Sbjct: 637 PREDALAKLQDVVERRVQV 655 >gi|313633402|gb|EFS00238.1| prolyl-tRNA synthetase [Listeria seeligeri FSL N1-067] Length = 568 Score = 230 bits (585), Expect = 5e-58, Method: Composition-based stats. Identities = 124/294 (42%), Positives = 165/294 (56%), Gaps = 5/294 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLTLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAVGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E Y+ M + Sbjct: 121 EIKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATNESLDEVYDLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--- 237 Y IF R GL+ + A+SG IGG + EF+ L+D GE + S D+ E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGKETQEFVALSDIGEDTIAYSD-ASDYAANVEMAPVL 239 Query: 238 -DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 L +E+ T P T L + + + ++ I Sbjct: 240 HMEKKSHELEKELEKVTTPDQKTIADIVTFLEVPIEKTMKSMLYQVDEEVIMVL 293 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 65/180 (36%), Positives = 102/180 (56%), Gaps = 3/180 (1%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ ++ D P+ + V GIEVGHIF GTKYS M+AT +G+ + MG YG Sbjct: 383 DLRMIQVGDLSPDGQGVIKFAEGIEVGHIFKLGTKYSQAMNATVLDENGRAQPIIMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R+++A+ E S+D G++W ++PF + LI + + E +Y L + G Sbjct: 443 IGVSRILSAIAEQSNDENGLVWDKKISPFDLHLIPVNMKSEEQVAFAETLYQSLQQAGFS 502 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G +FA ADL+G P+++ VG K ++ VE+K R TG ++ +E++N Sbjct: 503 VLIDDRSERAGVKFADADLIGLPIRITVGKK-AAEGIVEVKIRKTGEMIEVRQDELLNTL 561 >gi|59800999|ref|YP_207711.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090] gi|81311217|sp|Q5F938|SYP_NEIG1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|59717894|gb|AAW89299.1| putative prolyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090] Length = 570 Score = 230 bits (585), Expect = 5e-58, Method: Composition-based stats. Identities = 115/235 (48%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P +A ASHKLM+R G+I ++ G+Y+W+P+G + L V ++REE Sbjct: 1 MKASQFFISTLKEAPAEAAFASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G++E+ +P +Q A+LW ESGR++ YGKE+LRL DR+++ GPT EEV+ DI R Sbjct: 61 MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHERDFCMGPTCEEVIADIVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP FY IQ KFRDE+RPRFGVMR+REF+MKDAYSF + +Y+ M+ + Sbjct: 121 EINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQATYDAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 + RIF RLGL P+ A++G IGG SHEF VLA++GE + S D+ E Sbjct: 181 HCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDT-SDYAANIE 234 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 7/229 (3%) Query: 222 FCSKDFMDFPIPSENTDFDDIISLNSIVEQW----TAPYAATSDVHNEKLFDSLPEN--K 275 F K + DF + + A D+ N D P+ + Sbjct: 341 FTGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEFVDLRNVVEGDESPDGQGR 400 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 ARGIEVGH+F KY+ M+ +F +GK ++MG YGIG RVVAA IE ++D Sbjct: 401 LKLARGIEVGHVFQLRGKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDE 460 Query: 336 KGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KGIIW ++APF++ ++ + R+A ++IYA L G DV DD E+ G Sbjct: 461 KGIIWTKAMAPFEVVIVPMNYKKSDTVREAADRIYAELLAAGADVLLDDRDERAGVLLND 520 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 ++LLG P ++++G + + + VE R + +++ E++ + + Sbjct: 521 SELLGIPHRIVIGDRALKEGNVEYAERRGNEAQAVAIGEIVARVTASLN 569 >gi|254517451|ref|ZP_05129507.1| prolyl-tRNA synthetase [Clostridium sp. 7_2_43FAA] gi|226911200|gb|EEH96401.1| prolyl-tRNA synthetase [Clostridium sp. 7_2_43FAA] Length = 570 Score = 230 bits (585), Expect = 5e-58, Method: Composition-based stats. Identities = 127/265 (47%), Positives = 163/265 (61%), Gaps = 1/265 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+E P +AEI SHKLMLR GMI + + GIY+++PLG K L NV I+REE Sbjct: 1 MKMSNMLISTLREVPAEAEIDSHKLMLRAGMIRKMASGIYNYMPLGLKVLKNVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E +Q A+LW ESGR+D YG E++RL DRN++ GPTHEEV TDI R+ Sbjct: 61 MNNAGAQEFLASAVQPAELWQESGRWDVYGAELIRLKDRNNREFCLGPTHEEVFTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFGVMRSREF+MKDAYSFD EG SYNKM + Sbjct: 121 EIKSYKQLPVNLYQIQTKYRDERRPRFGVMRSREFIMKDAYSFDKDQEGLDVSYNKMREA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF+R G+ + P+ A+SG IGG S EF+V ++ GE V D+ E Sbjct: 181 YIKIFNRCGIDAKPVEADSGAIGGSNSAEFMVRSEVGEDDVVFCTAC-DYAANMEKAPST 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 + ++ E Sbjct: 240 VEKADAEELKDLVKTETPNVKTIEE 264 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 71/194 (36%), Positives = 104/194 (53%), Gaps = 4/194 (2%) Query: 255 PYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 D N + P K +RG EVGHIF GTKYS M+A F +GK+ Sbjct: 375 FQGVVGDYRNITEGEKCPVCGGKVTISRGTEVGHIFKLGTKYSEAMNANFIDENGKEKPF 434 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R +A++IE +D GI+WP SVAP+ +++I + D+ +IY L Sbjct: 435 IMGCYGIGVTRTMASIIEQHNDENGIVWPLSVAPYHVNIIPVNIKDEEQMKIANEIYEDL 494 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 +G D DD E+ G +F +DL+G P+++ VG K + D +VE K R T E++ +E Sbjct: 495 KSIGVDAILDDRNERAGVKFKDSDLMGIPMRITVGKK-IVDGEVEFKLR-TSDMENIKIE 552 Query: 433 EVINYASHRFSNNR 446 E ++ F N+ Sbjct: 553 EAVDRVREEFKKNK 566 >gi|326492063|dbj|BAJ98256.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326499331|dbj|BAK06156.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 667 Score = 230 bits (585), Expect = 5e-58, Method: Composition-based stats. Identities = 81/445 (18%), Positives = 157/445 (35%), Gaps = 42/445 (9%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQN 62 K ++ +E R D L L + I + G+ W P G + ++ Sbjct: 258 KAYIHFKEEAKRRDHRRLGQDLDLFS--IQEDAGGGLVFWHPKGAIIRHILEDSWKQTHL 315 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G + P + ADLW SG D Y + M D D+ P + +++ + Sbjct: 316 QRGYDLLYTPHVAKADLWKISGHIDFYKENMYNQMDVEDEPYQLRPMNCPYHILVYKRKL 375 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP ++ +R EL G+ R R F DA+ F L + + Sbjct: 376 QSYRDLPIRVAELGTVYRYELSGALHGLFRVRGFTQDDAHIFCLEDQIKDE-IRGVLDLT 434 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I + G ++ + + P S D + + DD Sbjct: 435 EEILGQFGFRNYEVNLSTRPEKS-----------------VGSDDIWEKATIALKDALDD 477 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 +I E A Y D+ K+ D+L + S ++ F ++ T Sbjct: 478 KGWGYTIDEGGGAFYGPKIDL---KIEDALGRKWQCSTVQVD----FNLPERFD----IT 526 Query: 302 FKGAD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + + K + + +G++ ++ + +P +AP + ++ + ++ Sbjct: 527 YVDSHTEKKRPIMIHRAILGSLERFFGILI---ENYAGDFPLWLAPTQARILPVTNNE-- 581 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ++ + L G GE++ A+ PL +VG K V + I+ Sbjct: 582 -LQYCNEVASELKSRGIRAEV-CHGERLPKLIRNAETQKVPLMAVVGPKEVEARTLTIRS 639 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R G M ++ I+ ++ Sbjct: 640 RHNGEMGTMPVDNFISKIQSAVADK 664 >gi|315302972|ref|ZP_07873693.1| prolyl-tRNA synthetase [Listeria ivanovii FSL F6-596] gi|313628661|gb|EFR97073.1| prolyl-tRNA synthetase [Listeria ivanovii FSL F6-596] Length = 538 Score = 230 bits (585), Expect = 5e-58, Method: Composition-based stats. Identities = 123/294 (41%), Positives = 165/294 (56%), Gaps = 5/294 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + AIIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLTLRKIEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR+ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAVGAAELLMPALQPAELWQESGRWSDYGPELMRLKDRAARDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF + E Y+ M + Sbjct: 121 EIKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHASNESLDEVYDLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--- 237 Y IF R GL+ + A+SG IGG + EF+ L++ GE + S D+ E Sbjct: 181 YSNIFSRCGLEFRSVIADSGSIGGKETKEFMALSEIGEDTIAYSD-ASDYAANVEMAPVL 239 Query: 238 -DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 L +E+ T P T L + + + ++ I Sbjct: 240 HMEKKSHELEKELEKVTTPNQKTIADIVTFLEVPIEKTMKSMLYQVDEEVIMVL 293 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 59/154 (38%), Positives = 87/154 (56%), Gaps = 2/154 (1%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ ++ D P+ + V GIEVGHIF GTKYS M+AT +G+ + MG YG Sbjct: 383 DLRMIQVGDLSPDGQGVIKFAEGIEVGHIFKLGTKYSQAMNATILDENGRAQPIIMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R+++A+ E S+D G++W ++PF + LI + + E +Y L + G Sbjct: 443 IGVSRILSAIAEQSNDENGLVWDKKISPFDLHLIPVNMKSEEQVAFAETLYVSLQQAGYS 502 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 V DD GE+ G +FA ADL+G PL++ VG K Sbjct: 503 VLIDDRGERAGVKFADADLIGLPLRITVGKKAAE 536 >gi|296270051|ref|YP_003652683.1| threonyl-tRNA synthetase [Thermobispora bispora DSM 43833] gi|296092838|gb|ADG88790.1| threonyl-tRNA synthetase [Thermobispora bispora DSM 43833] Length = 657 Score = 230 bits (585), Expect = 5e-58, Method: Composition-based stats. Identities = 66/445 (14%), Positives = 138/445 (31%), Gaps = 38/445 (8%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E RD +L L + + G+ + P G + R G Sbjct: 248 YLHFLEEAEKRDHRRLGVELDLFS-FPEELGSGLPVFHPKGGTIRRIMEDYSRRRHEEAG 306 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 ++ P + L+ SG + Y M + P + + IFR+ +SY Sbjct: 307 YSFVNTPHITKEKLYQISGHLNWYADAMFPPMELEGARYYLKPMNCPMHNLIFRARGRSY 366 Query: 126 RNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP ++ +R E G+ R R DA+ + + + L + Sbjct: 367 RELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDAHIYCTQEQMRDEL-RSLLRFVLDL 425 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 GL + + + S + + + + Sbjct: 426 LRDFGLNDFYLELST----------------KDPEKYVGSDEVWEEATRTLREVAEAENL 469 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + + D++ ++S ++ F ++ Sbjct: 470 ELVLDPGGAAFYGPKI---SVQARDAIGRTWQMSTIQLD----FNLP----ELFELEYQA 518 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG + G++ V+ + +P +AP ++ I I + Sbjct: 519 ADGTRKRPVMIHRALFGSIERFFGVLV---EHYAGAFPPWLAPVQVVGIPIT---EAHVP 572 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + RL + V D +++ + A P ++ G K V+ V ++R Sbjct: 573 YLQDVAKRLRERRIRVEVDASDDRMQKKIRNAQKAKVPYMLLAGDKDVAAGAVSFRYRNG 632 Query: 424 GIREDMSLEEVINYASHRFSNNRPV 448 + + +++ I V Sbjct: 633 EQKNGVPIDQAIEEIVSAVERRIQV 657 >gi|158313600|ref|YP_001506108.1| threonyl-tRNA synthetase [Frankia sp. EAN1pec] gi|238686857|sp|A8LE67|SYT_FRASN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|158109005|gb|ABW11202.1| threonyl-tRNA synthetase [Frankia sp. EAN1pec] Length = 658 Score = 230 bits (585), Expect = 5e-58, Method: Composition-based stats. Identities = 69/447 (15%), Positives = 137/447 (30%), Gaps = 37/447 (8%) Query: 5 KYFLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L + RD +L L + + G+ + P G + R Sbjct: 246 KAYQHRLAEAEKRDHRRLGAELDLFS-FPTEIGPGLAVFHPKGGAIRTVMEDYSRRRHIE 304 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHI 122 G ++ P + +DL+ SG D + M P + + IFRS Sbjct: 305 AGYEFVNTPHITKSDLYEISGHLDWFADGMYPPMQLDGGADYYLKPMNCPMHILIFRSRG 364 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR LP ++ +R E G+ R R DA+ F + + + Sbjct: 365 RSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDAHLFCAREQLPTEL-DTVLKFV 423 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L + GL+ + + P + S + Sbjct: 424 LGLLRDYGLEDFYLELSTRP----------------PGKAIGSDKEWEEATELLREAASK 467 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y + + D++ ++S ++ F ++ + A Sbjct: 468 QDLELVMDEGGGAFYGPKI---SVQARDAIGRTWQLSTIQVD----FQLPQRFDMTYQAA 520 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + + G + A++ + P +AP ++ I I Sbjct: 521 ---DGTRQRPFMIHRALFGTIERFFAILL---EHYAGALPPWLAPVQVVGIPIT---DEH 571 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + A+L + G V D +++ + A P ++ G + V+ V + R Sbjct: 572 VPYLTDVAAKLRQRGIRVEVDSSDDRMQKKIRTAQKQKVPFMLLAGDEDVAKGAVSFRFR 631 Query: 422 LTGIREDMSLEEVINYASHRFSNNRPV 448 R + ++E + V Sbjct: 632 DGTQRNGVPVDEAVAEILDAVERRIQV 658 >gi|297584075|ref|YP_003699855.1| prolyl-tRNA synthetase [Bacillus selenitireducens MLS10] gi|297142532|gb|ADH99289.1| prolyl-tRNA synthetase [Bacillus selenitireducens MLS10] Length = 567 Score = 230 bits (585), Expect = 5e-58, Method: Composition-based stats. Identities = 121/251 (48%), Positives = 166/251 (66%), Gaps = 1/251 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+ Y P L++ P DA++ SH+LMLR G+I Q + G+YS+LPLG K L V AI+REE Sbjct: 1 MRQRTYLSPTLRDIPSDADVVSHQLMLRAGLIRQSTSGVYSFLPLGYKVLQKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA EM +P++Q A+LW ESGR+D YG E++R DR+ + GPTHEEV+T I R Sbjct: 61 MDRAGAQEMFMPSIQPAELWQESGRWDDYGAELMRFKDRHQREFALGPTHEEVITAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+ LP T YQIQ KFRDE RPRFGV+R REFLMKDAYSFD+ EG SY++M+ + Sbjct: 121 DIRSYKELPMTLYQIQTKFRDERRPRFGVLRGREFLMKDAYSFDVDFEGLDQSYDQMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y ++F R L + A+SG +GG +HEF+VL+ GE + S ++ E + + Sbjct: 181 YKKVFTRCDLNFRAVVADSGAMGGKDTHEFMVLSSIGEDTIAYSD-ESEYAANIEIAEVN 239 Query: 241 DIISLNSIVEQ 251 + E+ Sbjct: 240 VRYKPSDEAEK 250 Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats. Identities = 72/187 (38%), Positives = 102/187 (54%), Gaps = 3/187 (1%) Query: 259 TSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 SD+ + D P+ K GIEVGH+F GTKYS + AT GK + MGS Sbjct: 381 VSDIRMIQEGDPSPDGKGTIRFKEGIEVGHVFKLGTKYSEALGATVLDDQGKARPIVMGS 440 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R VAA+IE HD GIIWP SVAPF+ LI + + E +Y L + G Sbjct: 441 YGIGVSRTVAAIIEEHHDEDGIIWPLSVAPFQAHLIPVNIKQDEQKALAESLYTELQESG 500 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D+ +DD E+ G +F +DLLG P++V +G K + VE+K+R +G ++ +++ N Sbjct: 501 LDILFDDRQERPGVKFKDSDLLGLPIRVTIGKK-AGEGIVEVKYRKSGETVEVHRDDLKN 559 Query: 437 YASHRFS 443 + Sbjct: 560 TILEYVN 566 >gi|110833600|ref|YP_692459.1| prolyl-tRNA synthetase [Alcanivorax borkumensis SK2] gi|110646711|emb|CAL16187.1| Prolyl-tRNA synthetase [Alcanivorax borkumensis SK2] Length = 566 Score = 230 bits (585), Expect = 5e-58, Method: Composition-based stats. Identities = 131/381 (34%), Positives = 190/381 (49%), Gaps = 19/381 (4%) Query: 8 LPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 L ++E P DA + SH+LMLR GM+ + + G+Y+WLP G + L V +IREE +R GA Sbjct: 2 LATVKETPADAVVTSHQLMLRAGMVRKLASGLYTWLPSGLRVLRKVEQVIREEMDRAGAQ 61 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 E+ +P +Q +LW ESGR +YG E+LR+ DR++ GPTHEEV+TD+ R+ + SY+ Sbjct: 62 EVLMPVVQPMELWEESGRAPAYGPELLRITDRHNNPFCLGPTHEEVITDMVRNELHSYKQ 121 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 LP FYQIQ KFRDE+RPRFG+MRSREF+MKDAYSF + +Y M +Y IF R Sbjct: 122 LPANFYQIQTKFRDEIRPRFGIMRSREFIMKDAYSFHTNMDSLADTYQIMHRAYCAIFDR 181 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----NTDFDDII 243 LGL P+ A++G IGG SHEF VLA++GE + S D+ E + Sbjct: 182 LGLDYRPVEADTGAIGGAASHEFHVLAESGEDDIAFSD-GSDYAANVELAEALAPTSERP 240 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPEN-KRVSARGIEVGHI--------FYFGTKY 294 + + +E+ P A T + + + + K + +G E G + Sbjct: 241 APGAAIEKVDTPNAKTIEELVTQFNLPIEKTIKTLVVKGAEEGQLVALLVRGDHELNDIK 300 Query: 295 SLPMSA-----TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 + + A F + V G +G + + VI + Sbjct: 301 AEKLDAVATPLEFASEEEIRKAVGAGPGSLGPVDLPFTVIADRSVAVMSDFGAGANEDGK 360 Query: 350 SLINIKAHDQVCRDACEKIYA 370 NI V + Sbjct: 361 HYFNINWERDVALPQIADLRN 381 Score = 166 bits (419), Expect = 1e-38, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 116/207 (56%), Gaps = 4/207 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLP 297 +D +I + +D+ N D P+ RGIEVGHIF GTKYS Sbjct: 357 EDGKHYFNINWERDVALPQIADLRNVVDGDPSPDGSGTLTIKRGIEVGHIFQLGTKYSEA 416 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-A 356 + AT +GK + MG YGIG RVVAA IE ++D +GIIWP+++APF+++L+ + Sbjct: 417 LGATVLDENGKSVVMPMGCYGIGVTRVVAAAIEQNNDDRGIIWPEAIAPFQVALVPVNIK 476 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 R+ EK+YA L+ +G +V +DD E++G + A +LLG P ++++ + + + Sbjct: 477 KSPRERELAEKLYAELTAMGIEVLFDDREKERLGVKLADTELLGIPHRIVIAERGMDNGV 536 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRF 442 +E K R + +++++E++ + + Sbjct: 537 LEYKGRRDADKTEVAMDEIVAFLKEKM 563 >gi|313638094|gb|EFS03361.1| prolyl-tRNA synthetase [Listeria seeligeri FSL S4-171] Length = 568 Score = 230 bits (585), Expect = 5e-58, Method: Composition-based stats. Identities = 124/294 (42%), Positives = 165/294 (56%), Gaps = 5/294 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLTLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAVGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E Y+ M + Sbjct: 121 EIKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATNESLDEVYDLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--- 237 Y IF R GL+ + A+SG IGG + EF+ L+D GE + S D+ E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGKETQEFVALSDIGEDTIAYSD-ASDYAANVEMAPVL 239 Query: 238 -DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 L +E+ T P T L + + + ++ I Sbjct: 240 HMEKKSHELEKELEKVTTPDQKTIADIVTFLEVPIEKTMKSMLYQVDEEVIMVL 293 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 65/180 (36%), Positives = 102/180 (56%), Gaps = 3/180 (1%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ ++ D P+ + V GIEVGHIF GTKYS M+AT +G+ + MG YG Sbjct: 383 DLRMIQVGDLSPDGQGVIKFAEGIEVGHIFKLGTKYSQAMNATVLDENGRAQPIIMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R+++A+ E S+D G++W ++PF + LI + + E +Y L + G Sbjct: 443 IGVSRILSAIAEQSNDENGLVWDKKISPFDLHLIPVNMKSEEQVAFAETLYQSLQQAGFS 502 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G +FA ADL+G P+++ VG K ++ VE+K R TG ++ +E++N Sbjct: 503 VLIDDRSERAGVKFADADLIGLPIRITVGKK-AAEGIVEVKIRKTGEMIEVRQDELLNTL 561 >gi|225548931|ref|ZP_03769908.1| threonyl-tRNA synthetase [Borrelia burgdorferi 94a] gi|225370534|gb|EEG99970.1| threonyl-tRNA synthetase [Borrelia burgdorferi 94a] Length = 581 Score = 230 bits (585), Expect = 5e-58, Method: Composition-based stats. Identities = 72/443 (16%), Positives = 155/443 (34%), Gaps = 37/443 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L + +E RD +L L + + G+ + P G K + REE ++ Sbjct: 172 RSYLNLREEIKKRDHRKLGKELDLFSIH-EEIGPGLVFFHPNGAKIRALIEDFWREEHSK 230 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + LW SG D Y M + + P + I+ + Sbjct: 231 NGYDILFTPHIGKSWLWQTSGHLDFYKDSMFEKIEMDKSDYYLKPMNCPFHIAIYNTGKH 290 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LPF + ++ +R E G+MR+R F DA+ + ++ + Sbjct: 291 SYRDLPFRWAELGTVYRYEKIGALHGMMRARGFTQDDAHIICTHSQVLDE-IKEVLRFAI 349 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ + G + + P + + + + D Sbjct: 350 YMWSKFGFSNPKAYLSTKP-----------------DKSVGNDYDWEMSLKVLEETLSDF 392 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I + A Y D+ K+ DSL ++S + F ++++ +A Sbjct: 393 EVPYEIDKGGGAFYGPKIDL---KIVDSLEREWQMSTIQFD----FNLPERFNMTYTAE- 444 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ ++ + G +W V I + NI Sbjct: 445 --DGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPLWLSPVQVVIIPVNNI------VE 496 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D K++ + G + D+ ++ ++ P I+G + ++ ++ I+ R Sbjct: 497 DYAIKVFNKFKNEGIRIKLDNSSSRMNAKIREYQAKKIPYMFIIGEREATEERISIRTRT 556 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 M L+E + + + + Sbjct: 557 NEQINGMKLDEALKFILFKIRDK 579 >gi|238063845|ref|ZP_04608554.1| threonyl-tRNA synthetase [Micromonospora sp. ATCC 39149] gi|237885656|gb|EEP74484.1| threonyl-tRNA synthetase [Micromonospora sp. ATCC 39149] Length = 676 Score = 230 bits (585), Expect = 5e-58, Method: Composition-based stats. Identities = 71/444 (15%), Positives = 136/444 (30%), Gaps = 38/444 (8%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E R D L L + + G+ + P G + R + Sbjct: 259 KAYLKLLEEAARRDHRKLGVDLDLFS-FPDELGSGLAVFHPKGGIIRREMENYSRIKHEE 317 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G ++ P + L+ SG D Y M + P + + IFRS + Sbjct: 318 AGYAFVNTPHITKGHLYEVSGHLDWYADGMFPPMEVEGANYYLKPMNCPMHDLIFRSRGR 377 Query: 124 SYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ +R E G+ R R DA+ F + + + L Sbjct: 378 SYRELPLRMFEFGTVYRYEKSGVVHGLTRVRGMTQDDAHIFCTEEQMAGEL-KSLLAFVL 436 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + GL + + + + + + T ++ Sbjct: 437 ELLRDYGLDDFYLELSTRNPEKS----------------VGTDENWERATEALRTAAEES 480 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + + D++ ++S ++ F ++ + Sbjct: 481 GLHLVPDPAGAAFYGPKI---SVQAKDAIGRTWQMSTIQVD----FNLPERF----GLEY 529 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + ADG + G++ V+ + G W V I + + Sbjct: 530 QAADGTRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPI------REDH 583 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D A L G D +++ + A P VI G V+ V ++R Sbjct: 584 TDYLRGFVAALRAEGIRAQVDAGDDRMQKKIRTAQQQKIPFMVIAGDDDVAAGTVSFRYR 643 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 R + E + + ++ Sbjct: 644 DGSQRNGVPTAEAVAHVLDVVNSR 667 >gi|228475159|ref|ZP_04059885.1| threonine--tRNA ligase [Staphylococcus hominis SK119] gi|228270770|gb|EEK12172.1| threonine--tRNA ligase [Staphylococcus hominis SK119] Length = 645 Score = 230 bits (585), Expect = 5e-58, Method: Composition-based stats. Identities = 70/428 (16%), Positives = 147/428 (34%), Gaps = 32/428 (7%) Query: 21 ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW 80 L L T G+ WLP G + I +++ G + P L + +L+ Sbjct: 246 IGKDLELFTNN-QLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVELY 304 Query: 81 VESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 SG +D Y +M ++ M+ P + ++ + SYR LP ++ Sbjct: 305 KTSGHWDHYRDDMFPPMKLDETEEMVLRPMNCPHHMMVYNNKPHSYRELPIRIAELGTMH 364 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 R E ++ + + + P+ K + ++ ++ G + R Sbjct: 365 RYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKDEFKRVVHMIQDVYEDFGFEDYTFRLS- 423 Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIISLNSIVEQWTAPYAA 258 D + + + D M S D++ A Y Sbjct: 424 -------------YRDPEDKEKYMDDDDMWNKAESMLKEAVDEMGLPYVEAIGEAAFYGP 470 Query: 259 TSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 DV ++ ++ + + +S ++ F ++ ++ G+DG++H + G Sbjct: 471 KLDV---QVKTAMGKEETLSTAQLD----FLLPERFD----LSYIGSDGENHRPVVIHRG 519 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 + + + + +I +N+ H D + L G Sbjct: 520 VVSTMERFVAFLTEETKGAFPTWLAPKQVEIIPVNVDLH----YDYARNLQDELKSQGVR 575 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E++G + A + P Q++VG K V +++V ++ + +E + +E I Sbjct: 576 VEIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNEVNVRKYGSQDQETIERDEFIWNL 635 Query: 439 SHRFSNNR 446 R Sbjct: 636 VDEIRLKR 643 >gi|172038860|ref|YP_001805361.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142] gi|171700314|gb|ACB53295.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142] Length = 608 Score = 230 bits (585), Expect = 6e-58, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 155/442 (35%), Gaps = 39/442 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD +L L G+ W P G + +++EQ + G + + Sbjct: 196 EEALKRDHRRLGKELGLFI-FSDPVGPGLPLWTPKGTIIRSTLEDFLKQEQLKRGYLPVV 254 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLA------DRNDKAMIYGPTHEEVMTDIFRSHIKS 124 P + DL+ SG + +Y ++M + ++ + P + I++S ++S Sbjct: 255 TPHIGRVDLFKISGHWQNYKEDMFPMMAETEEAKTSEMGFVLKPMNCPFHIQIYKSELRS 314 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR+LP + +R E G + D +TP+ + + L + Sbjct: 315 YRDLPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLDDEFLNVVDLILSV 374 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F L LK+ R D + S + + + + Sbjct: 375 FRSLQLKNFKARLS--------------FRDPNSDKYIGSNEAWNKAENAIRRAVQTLEM 420 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y D D+L ++ ++ + G Sbjct: 421 DYFEAEGEAAFYGPKLDFI---FQDALEREWQLGTVQVDYNLP--------ERFELEYVG 469 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G H + G++ + ++ + +P +AP ++ L+ + V D Sbjct: 470 EEGNRHRPVMIHRAPFGSLERLIGILI---EEYAGDFPLWLAPTQVRLLPV---SDVQLD 523 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + ++ +G D GE++G + P+ IVG+K V + + I+ R + Sbjct: 524 YVKDVANKMLSLGIRAEADTSGERLGKMIRNGEKQKIPVMAIVGAKEVEANALSIRTRAS 583 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G M+++EVI + +N+ Sbjct: 584 GELGTMAVDEVIEKLNDAITNH 605 >gi|320159528|ref|YP_004172752.1| threonyl-tRNA synthetase [Anaerolinea thermophila UNI-1] gi|319993381|dbj|BAJ62152.1| threonyl-tRNA synthetase [Anaerolinea thermophila UNI-1] Length = 623 Score = 230 bits (585), Expect = 6e-58, Method: Composition-based stats. Identities = 68/445 (15%), Positives = 148/445 (33%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L + + G+ W P G ++ + + +E + + Sbjct: 209 QYLWRLEEAKKRDHRKLGKELDIYL-FDDEIGPGLPLWTPRGGAIIEEIEKLAKEMEFKY 267 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P L DL++ SG Y + M + P + + IF S +S Sbjct: 268 GYERVRTPHLAKEDLYLRSGHLPYYAESMYPPMELEGVRYYVKPMNCPMHHKIFASKPRS 327 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + +R E FG+MR R M D++ + + E + + + YL Sbjct: 328 YRELPVRLAEYGTCYRYEKSGELFGLMRVRSMQMNDSHIYC-SEEQFEQEFVGVIHLYLE 386 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 F G++ MR + G + + + + D+ Sbjct: 387 YFRLFGIQDYLMRLST-------------HHPRGLGKKYVNNPELWRKTEDMVRKALDNN 433 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y DV ++ ++ ++ ++ F Sbjct: 434 GIPYVEIADEAAFYGPKIDV---QVKSAIGREFTLATNQVDFAQP--------ERFDLKF 482 Query: 303 KGADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G++ + + R++ ++E + Sbjct: 483 INEKGEEERPLIIHRAPLSTHERLIGFLLEHYAGAFPVWLSPEQVRIIPIT-------DA 535 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + +++ RL + D +++ ++ A LL P ++VG + V ++ Sbjct: 536 QNEYAKQLERRLRALEVRATADLDSDRMNAKIRKAQLLKIPYMLVVGEREAQAGAVALRK 595 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R G ++ +S++E + + S Sbjct: 596 RD-GTQQTLSVDEFVALLQEKISTR 619 >gi|317121850|ref|YP_004101853.1| prolyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885] gi|315591830|gb|ADU51126.1| prolyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885] Length = 586 Score = 230 bits (585), Expect = 6e-58, Method: Composition-based stats. Identities = 120/237 (50%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+++P +AEIASH+LMLR G+I + + GIY WLPLG++A+ V AI+REE Sbjct: 1 MRWSRLLIPTLRDDPAEAEIASHRLMLRAGLIRRVTAGIYEWLPLGRRAVAKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR G +E+ +P +Q A+LW E+GR+ YG+EM RL DR+ + GPTHEE++TD+ R+ Sbjct: 61 MNRKGGLEVGLPIVQPAELWRETGRWAEYGEEMWRLKDRHGREYCLGPTHEEIITDLVRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP YQIQ K+RDE+RPRFGVMR+REF+MKDAYSFD+ EG + SY M + Sbjct: 121 TVSSYRQLPLLLYQIQNKYRDEIRPRFGVMRAREFVMKDAYSFDVDAEGLERSYQAMDDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R GL + A+ G IGG +HEF+ LAD GE + + E Sbjct: 181 YRRIFSRCGLVFRAVAADPGAIGGSGTHEFMALADYGEALIVYCDAC-GYAANVEKA 236 Score = 166 bits (420), Expect = 7e-39, Method: Composition-based stats. Identities = 81/185 (43%), Positives = 108/185 (58%), Gaps = 2/185 (1%) Query: 261 DVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ DS P+ SARGIEVG IF TKYS + TFK ADG++ + MG YG Sbjct: 386 DLRLVGPGDSCPDCGAPMASARGIEVGQIFKLWTKYSEALGCTFKDADGRERPMVMGCYG 445 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R VAAVIE HD KGIIWP SVAPF ++ + ++ R A E+IY +L + G + Sbjct: 446 IGVTRTVAAVIEQHHDEKGIIWPMSVAPFHAVVVPVNYNEPDQRQAAERIYGQLVEAGVE 505 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 DD E+ G +F ADL+GFPL+V VG + +++ KVEI R TG + + +E Sbjct: 506 AVLDDRDERPGVKFNDADLIGFPLRVTVGPRGLAEGKVEIVDRATGQADPVPVEHAAAEV 565 Query: 439 SHRFS 443 + R Sbjct: 566 ARRVR 570 >gi|117928726|ref|YP_873277.1| prolyl-tRNA synthetase [Acidothermus cellulolyticus 11B] gi|152074742|sp|A0LV31|SYP_ACIC1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|117649189|gb|ABK53291.1| prolyl-tRNA synthetase [Acidothermus cellulolyticus 11B] Length = 583 Score = 230 bits (585), Expect = 6e-58, Method: Composition-based stats. Identities = 98/236 (41%), Positives = 140/236 (59%), Gaps = 1/236 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R SK F+ L+E+P DAE+ SH+L++R G I + + GIYSWLPLG L + I+R+E Sbjct: 4 RMSKLFVRTLREDPADAEVPSHRLLVRAGYIRRVAPGIYSWLPLGYAVLRKIEEIVRQEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G E+ P L +++ SGR++ YG + RL DR + GPTHEE+ T + + Sbjct: 64 LHIGGQEVHFPALIPREIYEASGRWNEYGDTLFRLKDRKGADYLLGPTHEELFTLLVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P +QIQ K+RDE RPR G++R REF+MKD+YSFDL G SY +Y Sbjct: 124 YSSYKDYPVILFQIQTKYRDEARPRAGILRGREFVMKDSYSFDLDDAGLAASYTAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 RIF RLGL+ + A SG +GG S EF+ + + GE ++ D+ +E Sbjct: 184 RRIFDRLGLRYRIVSAVSGAMGGSASEEFLAVTEVGEDAFVYCRNC-DYAANTEAV 238 Score = 134 bits (336), Expect = 4e-29, Method: Composition-based stats. Identities = 60/176 (34%), Positives = 88/176 (50%), Gaps = 6/176 (3%) Query: 269 DSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D + A+GIE+GHIF G KY+ G DG+ + MGSYGIG R VA Sbjct: 407 DPCGRCGGRLALAQGIEIGHIFQLGRKYTDAFELDALGPDGRPIRITMGSYGIGVSRAVA 466 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-G 385 A+ E HD G+IWP SV+P + ++ +Q E+ A L G DV DD Sbjct: 467 AIAEQCHDDAGLIWPRSVSPADVHVVIAGKGEQE--KLAEEFAAALDTAGLDVLLDDRVD 524 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 G +FA A+L+G P +VG + + VE++ R +G R +++L + + Sbjct: 525 ASAGVKFADAELIGIPSIAVVG-RGAARGVVEVRDRGSGERRELALTDAVAELRTL 579 >gi|157364839|ref|YP_001471606.1| threonyl-tRNA synthetase [Thermotoga lettingae TMO] gi|166987326|sp|A8F8Q8|SYT_THELT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157315443|gb|ABV34542.1| threonyl-tRNA synthetase [Thermotoga lettingae TMO] Length = 638 Score = 230 bits (585), Expect = 6e-58, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 146/444 (32%), Gaps = 42/444 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L +L+E RD L + I + G+ + P G L + R+ Sbjct: 226 KNYLDLLEEARKRDHRKLGPALDIF--FIDFDVAAGMPVFTPNGTVILKELMEFSRQLHI 283 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P + S LW SG ++ Y + M + ++ P + ++++ Sbjct: 284 EYGYEEVMTPLVMSEKLWRMSGHWEHYKENM-YFTTKEEQQFAIKPMNCPGHILVYKNKP 342 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+LP F++ R E G+ R R F DA+ F + + Sbjct: 343 VSYRDLPVRFFEFGKVHRYERSGVLHGLFRVRSFTQDDAHIFCRIDQVENE-IAGVINLV 401 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RI+ + G AE + D + + + + Sbjct: 402 HRIYSQFGFDYS---AELSTMPEDHM---------------GDEATWEKATEALRKAMES 443 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + E+ A Y D H + DS+ + + ++ FG Y+ Sbjct: 444 VGLQYVVKEKEGAFYGPKIDFH---VRDSIGRTWQCATIQLDFLMPQRFGLVYTSM---- 496 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 V + G++ ++ + G W V I + Sbjct: 497 ---DGKYQQPVMIHRAIYGSLERFLGILIEHYAGAFPTWLAPVQVIIIPIA------DRH 547 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + EK+ + K G V D E +G + A + P ++VG + V ++ R Sbjct: 548 FEYAEKVKSEFVKNGVRVKIDARRETVGYKIRDAQSMKIPYMLVVGDREADSEAVSVRTR 607 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + ++ V+ + + Sbjct: 608 GS-DFGSKPVKLVLEKITEEIATR 630 >gi|284030961|ref|YP_003380892.1| prolyl-tRNA synthetase [Kribbella flavida DSM 17836] gi|283810254|gb|ADB32093.1| prolyl-tRNA synthetase [Kribbella flavida DSM 17836] Length = 587 Score = 230 bits (585), Expect = 6e-58, Method: Composition-based stats. Identities = 110/284 (38%), Positives = 153/284 (53%), Gaps = 2/284 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G I + + G+Y+WLPLG + L NV I+REE Sbjct: 4 RMSSLFLRTLREDPADAEVPSHKLLVRAGYIRRTAPGMYTWLPLGLRVLRNVEKIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ P L + + +GR+ YG + RL DR M+ GPTHEE+ T + Sbjct: 64 DAIGAQELVFPALLPREPYEATGRWTEYGPNLFRLKDRKGADMLLGPTHEEMFTLAVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP + YQIQ K+RDE RPR GV+R REF+MKD+YSFD+ G + SY+ +Y Sbjct: 124 YSSYKDLPLSIYQIQNKYRDEARPRAGVLRGREFVMKDSYSFDVDQAGLQASYDLHRKAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD--F 239 +RIF RLG + ++A SG +GG S EF+ +A+ GE S + + Sbjct: 184 IRIFDRLGFDYVIVQAMSGAMGGSASEEFLAVAENGEDTFVRSPGGYAANVEAVVVPQSP 243 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 S E P T D E L P + Sbjct: 244 PVDASAVPAAEVVDTPDTPTIDTLVETLNAKHPRTDGRQWTAAD 287 Score = 142 bits (359), Expect = 8e-32, Method: Composition-based stats. Identities = 62/173 (35%), Positives = 89/173 (51%), Gaps = 3/173 (1%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 SARGIE+GHIF G KY+ + +GK V MGSYG+G R VAA+ E Sbjct: 416 GSGPLQSARGIEMGHIFQLGQKYAEALDLKVLDQNGKLVTVTMGSYGVGVTRAVAAIAEG 475 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGS 390 +HD G+IWP + P + L+ +V A E + L G V +DD G Sbjct: 476 NHDELGLIWPREITPADVHLVATGKETEVFAKAAE-LATELESRGLTVLYDDREKVSPGV 534 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 +F A+LLG P +VG K ++D +E+K R +G R D+++ EV++ Sbjct: 535 KFKDAELLGIPTIAVVG-KGLADGTIEVKDRRSGDRTDVAVTEVVDKLVEVVR 586 >gi|218438366|ref|YP_002376695.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7424] gi|218171094|gb|ACK69827.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7424] Length = 608 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 154/442 (34%), Gaps = 39/442 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD +L L G+ W P G + +++EQ + G + + Sbjct: 196 EEALKRDHRRLGRELGLFI-FSDAVGPGLPLWTPKGAIIRSTLEDFLKKEQIKRGYLPVV 254 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADR------NDKAMIYGPTHEEVMTDIFRSHIKS 124 P + DL+ SG + +Y ++M + N+ + P + I++S ++S Sbjct: 255 TPHIARIDLFKISGHWQNYKEDMFPMMAEDQESALNEMGFVLKPMNCPFHIQIYKSELRS 314 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR+LP + +R E G + D +TPE + + + L + Sbjct: 315 YRDLPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLEEEFLSVVDLILSV 374 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F+ L LK+ R D + D + + + + Sbjct: 375 FNSLQLKNFKARLS--------------FRDPASDKYIGGDDVWNKAENAIRSAVQKLNM 420 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y D D+L ++ ++ + Sbjct: 421 EHFEAPGEAAFYGPKLDFI---FKDALEREWQLGTVQVDYNLP--------ERFDLEYVA 469 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + G++ + ++ + +P +AP ++ L+ + D Sbjct: 470 EDGTRKRPVMIHRAPFGSLERLVGILI---EEYAGDFPLWLAPIQVRLLPV---SDPQLD 523 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ A++ G D GE++G A+ P+ +VG+K V + + I+ R + Sbjct: 524 YAKQVAAQMRSQGIRAEADTSGERLGKMIRNAEKQKIPVMGVVGAKEVESNTLSIRTRAS 583 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G M++ EVI + +N Sbjct: 584 GELGTMAVNEVIEKVTEAIANY 605 >gi|154174749|ref|YP_001407384.1| threonyl-tRNA synthetase [Campylobacter curvus 525.92] gi|171769252|sp|A7GVZ2|SYT_CAMC5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|112802358|gb|EAT99702.1| threonyl-tRNA synthetase [Campylobacter curvus 525.92] Length = 606 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 80/437 (18%), Positives = 154/437 (35%), Gaps = 40/437 (9%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 I + RD ++ L G + G+ WLP G + + I+ + G + Sbjct: 205 IEEAKKRDHRKLGVEMKLF-GFDEEVGGGLPIWLPNGGRLRSKLEQILYKAHRDRGYEPV 263 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P L AD+W SG Y +Y + M +D P + ++++ I+SYR+LP Sbjct: 264 RGPELLKADVWKRSGHYANYKENM-YFTTIDDAEYGIKPMNCVGHIKVYQTEIRSYRDLP 322 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 F++ + R E G+ R REF D++ F + +++ + L I Sbjct: 323 LKFFEYGVVHRHEKSGVLHGLFRVREFAQDDSHIFCMP--------SQIKQNILEILSFA 374 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 G I + E+ + T + S + D + D+ I Sbjct: 375 G-----------KIMQNFGFEYEMEISTKPAKAIGSDEIWDIATNALKEALDENGFKYGI 423 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 E A Y D+ K+ D+L + ++ F ++ + A+ + Sbjct: 424 DEGGGAFYGPKIDI---KITDALKRKWQCGTIQVD----FNLPERFD----LGYIDANNE 472 Query: 309 DHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + +G+ ++ + + + I D ++ Sbjct: 473 RQRPVMLHRALLGSFERFIGILIEHT------AGELPFFIAPTQVVIVPISDAHLDYAKE 526 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 I L K D E + + A+ P+ +++G V++ V ++ R + Sbjct: 527 IARELRKFNIDSEVASKNESLNKRIRTAEKQRVPMIIVLGDNEVANRSVALRDRQARTQS 586 Query: 428 DMSLEEVINYASHRFSN 444 DMSL E +N + S Sbjct: 587 DMSLAEFLNLTKEKLSE 603 >gi|15595065|ref|NP_212854.1| threonyl-tRNA synthetase [Borrelia burgdorferi B31] gi|218249246|ref|YP_002375218.1| threonyl-tRNA synthetase [Borrelia burgdorferi ZS7] gi|223889476|ref|ZP_03624062.1| threonyl-tRNA synthetase [Borrelia burgdorferi 64b] gi|8928363|sp|O51662|SYT_BORBU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226701542|sp|B7J0G5|SYT_BORBZ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|2688663|gb|AAC67076.1| threonyl-tRNA synthetase (thrZ) [Borrelia burgdorferi B31] gi|218164434|gb|ACK74495.1| threonyl-tRNA synthetase [Borrelia burgdorferi ZS7] gi|223885162|gb|EEF56266.1| threonyl-tRNA synthetase [Borrelia burgdorferi 64b] gi|312147875|gb|ADQ30534.1| threonyl-tRNA synthetase [Borrelia burgdorferi JD1] Length = 581 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 72/443 (16%), Positives = 155/443 (34%), Gaps = 37/443 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L + +E RD +L L + + G+ + P G K + REE ++ Sbjct: 172 RSYLNLREEIKKRDHRKLGKELDLFSIH-EEIGPGLVFFHPNGAKIRALIEDFWREEHSK 230 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + LW SG D Y M + + P + I+ + Sbjct: 231 NGYDILFTPHIGKSWLWQTSGHLDFYKDSMFEKIEMDKSDYYLKPMNCPFHIAIYNTGKH 290 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LPF + ++ +R E G+MR+R F DA+ + ++ + Sbjct: 291 SYRDLPFRWAELGTVYRYEKIGALHGMMRARGFTQDDAHIICTHSQVLDE-IKEVLRFAI 349 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ + G + + P + + + + D Sbjct: 350 YMWSKFGFSNPKAYLSTKP-----------------DKSVGNDSDWEMSLKVLEETLSDF 392 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I + A Y D+ K+ DSL ++S + F ++++ +A Sbjct: 393 EVPYEIDKGGGAFYGPKIDL---KIVDSLEREWQMSTIQFD----FNLPERFNMTYTAE- 444 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ ++ + G +W V I + NI Sbjct: 445 --DGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPLWLSPVQVVIIPVNNI------VE 496 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D K++ + G + D+ ++ ++ P I+G + ++ ++ I+ R Sbjct: 497 DYAIKVFNKFKNEGIRIKLDNSSSRMNAKIREYQAKKIPYMFIIGEREATEERISIRTRT 556 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 M L+E + + + + Sbjct: 557 NEQINGMKLDEALKFILFKIRDK 579 >gi|256391426|ref|YP_003112990.1| threonyl-tRNA synthetase [Catenulispora acidiphila DSM 44928] gi|256357652|gb|ACU71149.1| threonyl-tRNA synthetase [Catenulispora acidiphila DSM 44928] Length = 666 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 60/439 (13%), Positives = 133/439 (30%), Gaps = 39/439 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + G+ + P G + R+ G ++ Sbjct: 261 EAEKRDHRKIGAELDLFS-FPDELGSGLPVFHPKGGTIRRVMEDYSRKRHEEAGYEFVNT 319 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLA----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 P + +L+ SG D Y M + P + + I+R+ KSYR+ Sbjct: 320 PHITKGNLYEISGHLDWYKDGMFPPMVLDEGHGKQEYYLKPMNCPMHNLIYRARGKSYRD 379 Query: 128 LPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ +R E G+ R R DA+ + + + + L + Sbjct: 380 LPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDAHIYCTREQMRDELVS-LLRFVLDLLR 438 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 GL + + + + + + + + Sbjct: 439 DYGLNDFYLELST----------------KDPEKYVGTDEEWELATDTLREVAEGEDLEL 482 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 + A Y + + D++ ++S ++ F ++ L A Sbjct: 483 VMDPGGAAFYGPKI---SVQARDAIGRTWQMSTIQLD----FQLPQRFDLEYQAA---DG 532 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + + + G++ V+ + G W V I + E Sbjct: 533 SRQRPIMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPIT------DAHVPYLE 586 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + ++L G V D +++ + A P ++ G V+ + V ++R Sbjct: 587 LVASKLRAEGVRVEIDSSDDRMQKKIRNAQKQKVPYMLLAGDDDVAKAAVSFRYRSGEQN 646 Query: 427 EDMSLEEVINYASHRFSNN 445 + ++E + Sbjct: 647 NGVPVDEAVAEIVKAVRER 665 >gi|160889627|ref|ZP_02070630.1| hypothetical protein BACUNI_02053 [Bacteroides uniformis ATCC 8492] gi|317479178|ref|ZP_07938315.1| threonyl-tRNA synthetase [Bacteroides sp. 4_1_36] gi|156860619|gb|EDO54050.1| hypothetical protein BACUNI_02053 [Bacteroides uniformis ATCC 8492] gi|316904666|gb|EFV26483.1| threonyl-tRNA synthetase [Bacteroides sp. 4_1_36] Length = 646 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 148/445 (33%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L KG+ WLP G + +R Q R Sbjct: 230 EYLVLLEEAKKRDHRKIGKEMDLFM-FSDTVGKGLPMWLPKGTALRIRLQDFLRRIQARY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + L++ SG Y YGK+ + + P + I+++ Sbjct: 289 DYQEVMCPPIGNKLLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F + + ++ Sbjct: 349 RSYKDLPLRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDE-FLRVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + ++ + D + + D + + Sbjct: 408 SIVFESMDFENFEAQISLR--------------DKVNREKYIGSDENWEKAERAIIEACE 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + +E A Y D + D++ ++ ++ Sbjct: 454 EKGLKAKIEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFQL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GAD + H + G+M AV+ GK +W + I + Sbjct: 503 EYTGADNQKHRPVMVHRAPFGSMERFVAVLIEHTAGKFPLW------LTPDQVAILPISE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L + D+ E+IG + ++ P ++VG K + +V ++ Sbjct: 557 KFNDYAHEVKQYLKRYDIRAIVDERNEKIGRKIRDNEMKRIPYMLVVGEKEAENKEVAVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M EE + N Sbjct: 617 KQGEGDKGTMKFEEFAKKMNEEVQN 641 >gi|126657277|ref|ZP_01728443.1| threonyl-tRNA synthetase [Cyanothece sp. CCY0110] gi|126621548|gb|EAZ92259.1| threonyl-tRNA synthetase [Cyanothece sp. CCY0110] Length = 607 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 154/442 (34%), Gaps = 39/442 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD +L L G+ W P G + +++EQ + G + + Sbjct: 195 EEALKRDHRRLGKELGLFI-FSDPVGPGLPLWTPKGTIIRSTLEDFLKQEQLKRGYLPVV 253 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLA------DRNDKAMIYGPTHEEVMTDIFRSHIKS 124 P + DL+ SG + +Y ++M + ++ + P + I++S ++S Sbjct: 254 TPHIGRVDLFKISGHWQNYKEDMFPMMAENEEAKTSEMGFVLKPMNCPFHIQIYKSELRS 313 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR+LP + +R E G + D +TP+ + + L + Sbjct: 314 YRDLPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLDDEFLNVVDLILSV 373 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F L LK+ R D + S + + + + Sbjct: 374 FRSLQLKNFKARLS--------------FRDPNSDKYIGSNEAWNKAENAIRRAVQTLDM 419 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y D D+L ++ ++ + G Sbjct: 420 NYFEAEGEAAFYGPKLDFI---FQDALEREWQLGTVQVDYNLP--------ERFELEYVG 468 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G H + G++ + ++ + +P +AP ++ L+ + V D Sbjct: 469 EEGNRHRPVMIHRAPFGSLERLIGILI---EEYAGDFPLWLAPIQVRLLPV---SDVQLD 522 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + I ++ +G D GE++G + P+ IVG+K V + + I+ R + Sbjct: 523 YVKDIANKMLSLGIRAEADTSGERLGKMIRNGEKQKIPVMAIVGAKEVEANALSIRTRAS 582 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G M+++EVI +N+ Sbjct: 583 GELGTMAVDEVIEKLRDTITNH 604 >gi|318057114|ref|ZP_07975837.1| threonyl-tRNA synthetase [Streptomyces sp. SA3_actG] gi|318075787|ref|ZP_07983119.1| threonyl-tRNA synthetase [Streptomyces sp. SA3_actF] Length = 658 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 69/439 (15%), Positives = 134/439 (30%), Gaps = 36/439 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD ++L L + + G+ + P G + R G + Sbjct: 254 EAEKRDHRKLGNELDLFS-FPEEVGPGLAVFHPKGGIIRRAMEDYSRRRHEEEGYEFVYS 312 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P L+ +SG D Y M P + + IF + +SYR LP Sbjct: 313 PHTTKGALFQKSGHLDWYADGMYPPMQLDEGVDYYLKPMNCPMHNLIFDARGRSYRELPL 372 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 ++ +R E G+ RSR F DA+ + + ++ +K L + G Sbjct: 373 RLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQMAEEL-DKTLTFVLNLLRDYG 431 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 L + + E + S + + + + Sbjct: 432 LDDFYLELST----------------KDEKKFVGSDEVWEEATATLRQVAEKQGLPLVPD 475 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y + + D++ ++S ++ F ++ L +A + Sbjct: 476 PGGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FNLPERFDLSYTAA---DGSRQ 525 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + G++ AV+ + P +AP + I + ++ Sbjct: 526 RPVMIHRALFGSIERFFAVLL---EHYAGAMPPWLAPVQAVGIPVG---DAHVPYLKEFA 579 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 A + G V D +++ + P VIVG ++ V +HR + Sbjct: 580 AEARRKGLRVDVDASSDRMQKKIRNHQKQKTPFMVIVGDDDMNAGTVSFRHRDGSQENGI 639 Query: 430 SLEEVINYASHRFSNNRPV 448 +E I V Sbjct: 640 PKDEAIAKLLDIVERRVQV 658 >gi|314936214|ref|ZP_07843561.1| threonine--tRNA ligase [Staphylococcus hominis subsp. hominis C80] gi|313654833|gb|EFS18578.1| threonine--tRNA ligase [Staphylococcus hominis subsp. hominis C80] Length = 645 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 70/428 (16%), Positives = 147/428 (34%), Gaps = 32/428 (7%) Query: 21 ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW 80 L L T G+ WLP G + I +++ G + P L + +L+ Sbjct: 246 IGKDLELFTNN-QLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVELY 304 Query: 81 VESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKF 139 SG +D Y +M ++ M+ P + ++ + SYR LP ++ Sbjct: 305 KTSGHWDHYRDDMFPPMKLDETEEMVLRPMNCPHHMMVYNNKPHSYRELPIRIAELGTMH 364 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 R E ++ + + + P+ K + ++ ++ G + R Sbjct: 365 RYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKDEFKRVVHMIQDVYEDFGFEDYTFRLS- 423 Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDIISLNSIVEQWTAPYAA 258 D + + + D M S D++ A Y Sbjct: 424 -------------YRDPEDKEKYMDDDDMWNKAESMLKEAVDEMGLPYVEAIGEAAFYGP 470 Query: 259 TSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 DV ++ ++ + + +S ++ F ++ ++ G+DG++H + G Sbjct: 471 KLDV---QVKTAMGKEETLSTAQLD----FLLPERFD----LSYIGSDGENHRPVVIHRG 519 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 + + + + +I +N+ H D + L G Sbjct: 520 VVSTMERFVAFLTEETKGAFPTWLAPKQVEIIPVNVDLH----YDYARNLQDELKSQGVR 575 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E++G + A + P Q++VG K V +++V ++ + +E + +E I Sbjct: 576 VEIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNEVNVRKYGSQDQETIERDEFIWNL 635 Query: 439 SHRFSNNR 446 R Sbjct: 636 VDEIRLKR 643 >gi|260881838|ref|ZP_05893576.1| proline--tRNA ligase [Mitsuokella multacida DSM 20544] gi|260847809|gb|EEX67816.1| proline--tRNA ligase [Mitsuokella multacida DSM 20544] Length = 571 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 117/263 (44%), Positives = 162/263 (61%), Gaps = 2/263 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S + P L+ P +AEIASH+LM R GMI + + G+Y++LPL + + + IIREE Sbjct: 1 MRASNLYAPTLRNTPAEAEIASHQLMYRAGMIRKTAGGMYTFLPLAWRTIRKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P LQ A+ W ESGR+ +YG EM+R+ DR+ + GPTHEE++T + R Sbjct: 61 MDAAGGQEIMMPILQPAEFWQESGRWGAYGDEMMRIKDRHGRDFCLGPTHEEMITALVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ KFRDE RPRFG+MRSREF+MKD YSFD EG SY KM+ + Sbjct: 121 EVRSYKELPLMLYQIQDKFRDERRPRFGLMRSREFIMKDLYSFDKDVEGMNESYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP--IPSENTD 238 Y IF R+GL+ P+ A++G IGG SHEF VLAD GE+ + +E Sbjct: 181 YTNIFTRMGLEFRPVEADNGAIGGGHSHEFTVLADAGESNIAVCTKCDYAASDEKAELKP 240 Query: 239 FDDIISLNSIVEQWTAPYAATSD 261 + +E+ + P T + Sbjct: 241 VEAPAEDELPLEKVSTPGTNTIE 263 Score = 162 bits (411), Expect = 9e-38, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 101/196 (51%), Gaps = 2/196 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + +D+ K D P RGIE G +F GTKYS M ATF +GK Sbjct: 375 DFDKDAIIVTDLRMVKEGDPCPHCGAPLKMTRGIEAGQVFTLGTKYSKAMGATFLDENGK 434 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + + MG YGIG R +AA IE ++D +GI+WP ++APF++ ++ + A + E I Sbjct: 435 EQPLVMGCYGIGVGRTMAAAIEQNNDDQGIVWPRAIAPFEVVVVAVNAKKEEQLTYAEGI 494 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 Y K G DV DD E+ G +F DL+G+P++V +G K V + +E+K R TG + Sbjct: 495 YDECRKAGLDVLLDDRKERAGVKFKDCDLIGYPVRVTIGPKAVDEDIIEVKVRKTGEVYN 554 Query: 429 MSLEEVINYASHRFSN 444 + + + + Sbjct: 555 FTRADYLEKVQELLKD 570 >gi|270293969|ref|ZP_06200171.1| threonyl-tRNA synthetase [Bacteroides sp. D20] gi|270275436|gb|EFA21296.1| threonyl-tRNA synthetase [Bacteroides sp. D20] Length = 646 Score = 229 bits (584), Expect = 7e-58, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 148/445 (33%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L KG+ WLP G + +R Q R Sbjct: 230 EYLVLLEEAKKRDHRKIGKEMDLFM-FSDTVGKGLPMWLPKGTALRIRLQDFLRRIQARY 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + L++ SG Y YGK+ + + P + I+++ Sbjct: 289 DYQEVMCPPIGNKLLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F + + ++ Sbjct: 349 RSYKDLPLRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDE-FLRVMDII 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +F + ++ + D + + D + + Sbjct: 408 SIVFESMDFENFEAQISLR--------------DKVNREKYIGSDENWEKAERAIIEACE 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + +E A Y D + D++ ++ ++ Sbjct: 454 EKGLKAKIEYGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFQL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GAD + H + G+M AV+ GK +W + I + Sbjct: 503 EYTGADNQKHRPVMVHRAPFGSMERFVAVLIEHTAGKFPLW------LTPDQVAILPISE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L + D+ E+IG + ++ P ++VG K + +V ++ Sbjct: 557 KFNDYAHEVKQYLKRYDIRAIVDERNEKIGRKIRDNEMKRIPYMLVVGEKEAENKEVAVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M EE + N Sbjct: 617 KQGEGDKGTMKFEEFAKKMNEEVQN 641 >gi|319941771|ref|ZP_08016093.1| prolyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B] gi|319804704|gb|EFW01571.1| prolyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B] Length = 582 Score = 229 bits (584), Expect = 7e-58, Method: Composition-based stats. Identities = 119/275 (43%), Positives = 172/275 (62%), Gaps = 5/275 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +F+ L+E P DA++ S + M+R+GMI + + G+Y+++PLG + + + IIR+E Sbjct: 1 MRARSFFISTLKEAPADADVISQQYMIRSGMIKKLAAGVYTYMPLGLRVIRKIENIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R G+IE+ +P +Q A+LW E+GR++ YG E+LR+ DR+ + + PT EEV+TD+ R Sbjct: 61 MVRAGSIELLMPMVQPAELWQETGRWEKYGPELLRIKDRHMRDFVLQPTSEEVITDVARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKS+R LP F+ IQ KFRDE RPRFGVMR REF MKDAYSFD G+ SY+KM+ + Sbjct: 121 EIKSWRQLPVNFFHIQTKFRDERRPRFGVMRGREFTMKDAYSFDRDEAGAGLSYDKMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD-- 238 Y RIF R+GL +RA++G IGG SHEF V+A+ GE + D D+ E D Sbjct: 181 YQRIFTRIGLVFRAVRADTGSIGGSRSHEFQVIANAGEDVIAYCPD-SDYAANIELADAS 239 Query: 239 --FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 D + + +E+ P ++ E L L Sbjct: 240 SVLDGRKAPTAALEKRATPGKEKCELVAEYLGLPL 274 Score = 168 bits (426), Expect = 2e-39, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 102/193 (52%), Gaps = 4/193 (2%) Query: 255 PYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P D+ N D P+ K V RGIEVGH+F+ GT+YS PM ATF +G+ + Sbjct: 388 PEPVVMDLRNVVEGDKSPDGKGVLRLQRGIEVGHVFFLGTRYSEPMHATFLDENGQPKPM 447 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 QMG YGIG RV A IE HD KGI WPD++APF++ + + A + R A + +Y Sbjct: 448 QMGCYGIGVTRVAGAAIEQRHDDKGIQWPDAIAPFEVVICPMNYAKSEDVRKAADALYED 507 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT-GIREDMS 430 L G DV DD + G FA +L+G P +V++G + + + ++E R + + Sbjct: 508 LKARGVDVILDDRDMRPGVMFAEWELIGVPHRVVIGDRGLKNGEIEYAERTNLAEKTMVP 567 Query: 431 LEEVINYASHRFS 443 + + + R Sbjct: 568 VADAAAFIVGRIK 580 >gi|262047409|ref|ZP_06020366.1| threonyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US] gi|260572383|gb|EEX28946.1| threonyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US] Length = 644 Score = 229 bits (584), Expect = 7e-58, Method: Composition-based stats. Identities = 79/433 (18%), Positives = 153/433 (35%), Gaps = 34/433 (7%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD S L L + + G+ W+P G V I + + G + P L Sbjct: 239 RDHRTISRDLDLF--FVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVL 296 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y +M D D M P + I++ HI+SYR+LP Sbjct: 297 MNLDAYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVA 356 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + K+ + ++ + Sbjct: 357 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQTE-FAKILKLIMDVYKDFDITD 415 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + F + + + DD+ E Sbjct: 416 YYFRLS-------------YRDPKNTDKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGE 462 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ T+ G DG++H Sbjct: 463 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----GLTYVGQDGEEHRP 511 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 M G + + I + +P +AP ++ +I + + EK+ L Sbjct: 512 VMIHR--GIVGTMERFIAYLTEIYKGAFPTWLAPVQVEIIPVNL--DAHGEYAEKVRQEL 567 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 +K G D E++G + + P +++G + + + V ++ T SL Sbjct: 568 AKRGFRAEVDTRNEKMGYKIRESQTQKVPYTLVLGDEEMKNGSVNVRRYGTDEEISKSLT 627 Query: 433 EVINYASHRFSNN 445 + IN + Sbjct: 628 DFINEIDADVKSY 640 >gi|167389590|ref|XP_001739012.1| threonyl-tRNA synthetase, cytoplasmic [Entamoeba dispar SAW760] gi|165897485|gb|EDR24628.1| threonyl-tRNA synthetase, cytoplasmic, putative [Entamoeba dispar SAW760] Length = 676 Score = 229 bits (584), Expect = 7e-58, Method: Composition-based stats. Identities = 71/445 (15%), Positives = 144/445 (32%), Gaps = 36/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y + + RD + + L H S G WLP G + + + +IR E Sbjct: 267 LKEYIKRAEEADKRDHRLIGRQQDLF--FFHVLSPGSCFWLPHGTRIYNKLVQLIRSEYR 324 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P + + LW SG + Y +M + + P + +F S Sbjct: 325 VLGYQEVITPNIFLSTLWETSGHWQHYKDDMFSF-ECEKQTFALKPMNCPGHCVMFASKK 383 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR LP + + + R+EL G+ R R F+ D++ F + Sbjct: 384 RSYRELPLRYAEFGVLHRNELTGALHGLTRVRRFVQDDSHIFCTMDQIESEVT-----GV 438 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L + ++ I L+ E + + + +D Sbjct: 439 LNLMKKIYKIF-------------GFKTEIALSTRNEKKFMGEIETWNKAEAMLTQVLND 485 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I A Y D+ E D+L +V+ ++ F ++ L + Sbjct: 486 SHLPFVINPGDGAFYGPKIDIRIE---DALGRKHQVATVQLD----FQLPLRFKLDYMSE 538 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 K + + R A + E + + + Sbjct: 539 DPNQPLKTPVMVHRAVLGSIERFTAILTEHLAGKWPFWLSPR-------QVMVCTVSEKY 591 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + KI L+ G DD ++ + A + + +++G + + + V ++ R Sbjct: 592 NEYGAKITKELNDAGFYADLDDSDNKLPKKIRNAQVAQYNFILVIGEEELVSNSVNVRTR 651 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + + + E I + ++ + Sbjct: 652 KSKVEGKVEFSEFIKHLKQLEADKQ 676 >gi|300864298|ref|ZP_07109176.1| Prolyl-tRNA synthetase [Oscillatoria sp. PCC 6506] gi|300337687|emb|CBN54322.1| Prolyl-tRNA synthetase [Oscillatoria sp. PCC 6506] Length = 601 Score = 229 bits (584), Expect = 7e-58, Method: Composition-based stats. Identities = 114/240 (47%), Positives = 150/240 (62%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E P +AEI SHKL+LR G I + G+Y +LPL + L V+ I+REE Sbjct: 1 MRLSQMLFATLREEPAEAEIPSHKLLLRAGYIRRIGSGVYVYLPLLWRVLKKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + TGA E +P LQ A+LW ESGR+D+Y K M L DR ++ + GPTHEEV+T I Sbjct: 61 MDATGAQECLLPQLQPAELWRESGRWDTYTKAEGIMFALTDRQNRELGLGPTHEEVITTI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF E K +Y M Sbjct: 121 AKDMIRSYRQLPLHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHKDEESLKKTYQDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y + R GL+ + A+SG IGG S EF+VLA+ GE +V ++D + E Sbjct: 181 AQAYSNMLRRCGLEFRGVDADSGAIGGSGSQEFMVLAEAGEDEVLYTEDGQ-YAANVEKA 239 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 3/200 (1%) Query: 247 SIVEQWTAPYAATSDVHNEKLFDSL--PENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + +++ P +K +L P +ARGIEVGHIF GTKYS M AT+ Sbjct: 400 NWGKEFQLPEKVVDVRKAKKGDRALHNPAQTLQTARGIEVGHIFQLGTKYSQAMGATYTN 459 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 G++ + MG YG+G R+ + +E S+D GIIWP ++AP+++ + D + Sbjct: 460 EQGEEIPLVMGCYGLGVSRLAQSAVEQSYDKDGIIWPVAIAPYQVIISIPNISDAQQIEV 519 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 EK+Y L++ G + DD E+ G +F ADL+G P +++ G + + KVE+ R Sbjct: 520 AEKLYTELNQAGVETLLDDRDERAGVKFKDADLIGIPYRIVTG-RSLKQGKVEVVERAAH 578 Query: 425 IREDMSLEEVINYASHRFSN 444 ++++++V + S Sbjct: 579 KSHEIAIDDVKSTLMQWIST 598 >gi|262037473|ref|ZP_06010933.1| proline--tRNA ligase [Leptotrichia goodfellowii F0264] gi|261748508|gb|EEY35887.1| proline--tRNA ligase [Leptotrichia goodfellowii F0264] Length = 576 Score = 229 bits (584), Expect = 7e-58, Method: Composition-based stats. Identities = 124/236 (52%), Positives = 159/236 (67%), Gaps = 1/236 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R SK FL +E P++AEI SH+LMLR MI Q ++G+YS+LPLG K L + I+REE Sbjct: 8 RLSKAFLKTYKEAPKEAEIISHQLMLRASMIKQLTRGVYSYLPLGYKVLRKIENIVREEM 67 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 NR A E+ +P LQ A LW ESGR+ +YG E++RL DRN++ GPTHEEV+TDI R+ Sbjct: 68 NRANAQEIHMPVLQPASLWEESGRWFAYGPELMRLKDRNEREFALGPTHEEVVTDIVRNM 127 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SY++LPF YQIQ KFRDE+RPRFG+MR REFLMKDAYSF + + Y M +Y Sbjct: 128 VSSYKDLPFNLYQIQTKFRDEMRPRFGLMRGREFLMKDAYSFHIDQKSLDEEYLNMKSAY 187 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 R+F R GL + A+SG IGGD SHEF+VLAD+GE + S + E Sbjct: 188 ERVFIRCGLDFRAVEADSGSIGGDSSHEFMVLADSGEDDILYSD-VSGYAANIEKA 242 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 108/207 (52%), Gaps = 3/207 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLP 297 + V Y +D+ + D P+ K ARGIEVGHIF G KYS Sbjct: 371 NKKGYHYINVNLEDLAYDFVADIREARAGDGSPDGKGTLKVARGIEVGHIFKLGDKYSKA 430 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 ++AT +GK + MG YGIG RV+AA IE +HD GIIWP ++AP+ + +I Sbjct: 431 LNATVLDENGKQQIIAMGCYGIGISRVMAAAIEQNHDEFGIIWPKNIAPYLVDVIIANIK 490 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D+ EK+Y L G + DD E+ G +F ADL+G PL+++VG K ++ KVE Sbjct: 491 DEAQFSLGEKLYKELCDNGIETVLDDRNERAGFKFKDADLIGIPLKIVVG-KGAAEGKVE 549 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSN 444 IK R TG ++ EEV ++ Sbjct: 550 IKDRRTGESREVKAEEVTDFVRRFIEE 576 >gi|126306083|ref|XP_001381501.1| PREDICTED: similar to Prolyl-tRNA synthetase (mitochondrial)(putative) [Monodelphis domestica] Length = 475 Score = 229 bits (584), Expect = 7e-58, Method: Composition-based stats. Identities = 148/456 (32%), Positives = 228/456 (50%), Gaps = 44/456 (9%) Query: 3 RSKYFLPI---------LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNV 53 S +F P L+ + S +LML+TG+IH G Y +LP +A++ + Sbjct: 42 LSHFFQPQNLREDQVVGLESKSAEVTCKSQRLMLQTGLIHPAGPGCYHYLPYTVRAMEKL 101 Query: 54 NAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEV 113 +I +E G ++ +PTL SA+LW + R++ GKE+ RL DR++K GPTHEEV Sbjct: 102 VKVIDQEMQAIGGQKLDMPTLSSAELWRVTDRWNLMGKELFRLQDRHNKDYCLGPTHEEV 161 Query: 114 MT-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKH 172 +T + SY+ LP+ YQI KFRDE RPRFG++R REF MKD Y+FD + E + Sbjct: 162 ITSLMASQKTLSYKQLPYLLYQITRKFRDEPRPRFGLLRGREFYMKDMYTFDCSSEAAHQ 221 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 +Y+ + +Y R+F+RLGL+ + ++A G IGG +SHEF + + GE + + +F Sbjct: 222 TYDLVCEAYGRVFNRLGLQFVRVQAAVGSIGGTMSHEFQLPLNIGEDVLAVCSNC-NFAA 280 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 E D D + + K +G+EVGH FY GT Sbjct: 281 NVETLDPRDP-------------------------TCPVCQGKLTETKGVEVGHTFYLGT 315 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 KYS +A F A GK ++MG YG+G R++AA IE + I WP +AP+++ LI Sbjct: 316 KYSSVFNAEFINAQGKPSLLEMGCYGLGVTRILAAAIEMLSMEECIRWPSLLAPYQVCLI 375 Query: 353 NIKAHD------QVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVI 405 K ++ + I L ++ +V DD IG++ A+ LG+P VI Sbjct: 376 PPKKGSKEEMGIELMGTLYDDITEALPQLKGEVLLDDRIHLTIGNRLKDANKLGYPFVVI 435 Query: 406 VGSKFVSDSK-VEIKHRLTGIREDMSLEEVINYASH 440 G + E+ + ++ + VI+ Sbjct: 436 AGKRASEQPCHFEVWCQNNNEVVFLTKQAVIDLLRK 471 >gi|56696171|ref|YP_166527.1| threonyl-tRNA synthetase [Ruegeria pomeroyi DSS-3] gi|73919826|sp|Q5LTX8|SYT_SILPO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56677908|gb|AAV94574.1| threonyl-tRNA synthetase [Ruegeria pomeroyi DSS-3] Length = 648 Score = 229 bits (584), Expect = 7e-58, Method: Composition-based stats. Identities = 81/438 (18%), Positives = 143/438 (32%), Gaps = 45/438 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD ++ L + + + G W P G + +R +Q R Sbjct: 234 KAHLHMLEEAAKRDHRKLGREMDLF--HMQEEAPGQIFWHPNGWTIYTTLQDYMRRQQRR 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G +E++ P + LW SG ++ Y + M + R P + IF Sbjct: 292 GGYVEVNTPQVVDRKLWEASGHWEKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQIF 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F D + F + + + Sbjct: 352 NQGLKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCAEDQIESET-AEF 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 I+ LG + ++ P S D + + Sbjct: 411 IDFLSMIYKDLGFEKFSVKFSDRPDTR-----------------AGSDAVWDKAEAALLS 453 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + A Y + L D++ + + ++ F + Sbjct: 454 ATRAAGIEPELNPGEGAFYGPKLEF---VLTDAIGRDWQCGTHQVD----FVLPER---- 502 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + AT+ GADG H + +G+ ++ H GK W S+ Sbjct: 503 LDATYIGADGAKHRPVMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASIT---- 558 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++ A L G D E+I + + P+ + VG + V + V Sbjct: 559 --SEADDYVREVVAELCAAGVRAEADTRNEKINYKVREHSVGKVPVILAVGHREVEERTV 616 Query: 417 EIKHRLTGIREDMSLEEV 434 ++ SL +V Sbjct: 617 SVRRLGEKQTSVQSLADV 634 >gi|15643280|ref|NP_228324.1| prolyl-tRNA synthetase [Thermotoga maritima MSB8] gi|81859132|sp|Q9WYY4|SYP_THEMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|4981026|gb|AAD35599.1|AE001727_11 prolyl-tRNA synthetase [Thermotoga maritima MSB8] Length = 577 Score = 229 bits (584), Expect = 7e-58, Method: Composition-based stats. Identities = 108/227 (47%), Positives = 156/227 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + P L+E P D E SH+ +LR G I + + GIY++LPLG++ L + I+REE Sbjct: 1 MRMKDLYAPTLKETPSDVETVSHEYLLRGGFIRKVAAGIYTYLPLGRRVLLKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P LQ A+LW +SGR+D YG EM++L DR+++ GPTHEE++TD+ ++ Sbjct: 61 MNRIGAQEILMPILQPAELWKQSGRWDDYGPEMMKLKDRHERDFTLGPTHEEIVTDLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP T YQI K+RDE+RPRFG++R+REF+MKDAYSF + E +Y + + Sbjct: 121 ELRSYKQLPLTLYQIANKYRDEIRPRFGLLRAREFIMKDAYSFHASWESLDETYEQFKKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 Y RI RLG++ + + AE+G IGG+ SHEF+V A GET V + Sbjct: 181 YSRIMERLGVRYMIIEAETGAIGGNASHEFVVPAKIGETNVLFCEKC 227 Score = 147 bits (372), Expect = 3e-33, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 98/196 (50%), Gaps = 7/196 (3%) Query: 258 ATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 D+ D P + +GIE+GHIF GTKYS M A F +G+ MG Sbjct: 378 EWYDLRTVVEGDPCPVCGEPLKATKGIELGHIFKLGTKYSEAMKAYFMDENGEMKPFIMG 437 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YG G R +AAV+E HD G+IWP S+AP+ + + + +D + EKIY LS+ Sbjct: 438 CYGWGVSRTMAAVVEHFHDENGMIWPLSIAPYTVVVDILNMNDAEQKQVGEKIYQVLSEK 497 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE-- 433 G +V DD G +F ADL+GFP+++ VG + + + VE+K R + ++++ Sbjct: 498 GEEVVLDDREVSPGFKFKDADLIGFPIRINVG-RSLKEGVVELKKRYSKELVKVNIKNGF 556 Query: 434 --VINYASHRFSNNRP 447 ++ P Sbjct: 557 GALLETLEKMKREYDP 572 >gi|320333471|ref|YP_004170182.1| threonyl-tRNA synthetase [Deinococcus maricopensis DSM 21211] gi|319754760|gb|ADV66517.1| threonyl-tRNA synthetase [Deinococcus maricopensis DSM 21211] Length = 649 Score = 229 bits (584), Expect = 7e-58, Method: Composition-based stats. Identities = 80/448 (17%), Positives = 149/448 (33%), Gaps = 42/448 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +Y + + RD +L L I KG+ WLP G + + +RE+Q Sbjct: 236 EYLHRLEEAKKRDHRKLGRELELFV--IDPLVGKGLPMWLPNGTILREELTRFLREQQFA 293 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + +L+ SG Y +Y +D+ + P + I+ S + Sbjct: 294 RGYQGVVTPNIGNLELYKTSGHYQNYSDSNFSPITVDDEQYMLKPMNCPHHVRIYASKPR 353 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + +R E G+ R R F DA+ F P+ K + + + Sbjct: 354 SYRDLPVRLAEFGTVYRYEQSGELNGLTRVRGFTQDDAHLFCR-PDQLKAEFLNVLDLTV 412 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + G+ + R + D T+ ++D + +++ Sbjct: 413 LVLRTFGMNDVRFRVGTR--------------DPENTKYVGAEDNWNAAERQIIEAVEEV 458 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 SI A Y D + D L ++ ++ ++ Sbjct: 459 GLPYSIEPGDAAFYGPKLDF---VVRDVLGREWQLGTIQVDYNLP--------ERFDISY 507 Query: 303 KGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DG DH M R V +IE + Sbjct: 508 VGEDGADHRPIMIHRAPFGSLERFVGILIEHYGGDFPLWLAPRQVAIIPIA-------DR 560 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + + A L G DD ++ ++ A+L P+ +IVG K +V ++ Sbjct: 561 HNEYAYALEAELRAAGLRTEVDDSSNRMNAKVRAAELSKIPVMLIVGDKEQEGRQVSVRE 620 Query: 421 R---LTGIREDMSLEEVINYASHRFSNN 445 R R+ ++ +++ R+ Sbjct: 621 RTPEGHKERKGVAFDDLKAELLERYRTR 648 >gi|293396370|ref|ZP_06640648.1| threonine-tRNA ligase [Serratia odorifera DSM 4582] gi|291421159|gb|EFE94410.1| threonine-tRNA ligase [Serratia odorifera DSM 4582] Length = 387 Score = 229 bits (584), Expect = 7e-58, Method: Composition-based stats. Identities = 69/416 (16%), Positives = 137/416 (32%), Gaps = 38/416 (9%) Query: 32 IHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGK 91 + + + G+ W G + A +R + E+ P + LW ++G +++Y Sbjct: 1 MQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKD 60 Query: 92 EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVM 150 M ++ P + IF +KSYR+LP + R+E G+M Sbjct: 61 AMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMGEFGSCHRNEPSGSLHGLM 119 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R R F DA+ F T + + N+ ++ G + I ++ + P + + Sbjct: 120 RVRGFTQDDAHIFC-TEDQVRAEVNECIRMVYDVYGTFGFEKIAVKLSTRPEKRIGTDDM 178 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 A+ + A Y + L D Sbjct: 179 WTRAE-----------------EDLAAALTENGIPFEYQPGEGAFYGPKIEF---TLHDC 218 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH-YVQMGSYGIGAMRVVAAVI 329 L + ++ G A++ G + + V + +G+M ++ Sbjct: 219 LDRAWQCGTVQLDFFLPGRLG--------ASYVGENNERVVPVMIHRAILGSMERFIGIL 270 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 + G W V +++ D +++ +L G V D E+IG Sbjct: 271 TEEYAGFYPTWIAPVQVVVMNIT------DSQSDYVQQLTKKLQDAGIRVKADLRNEKIG 324 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 + L P ++ G K V KV ++ R + + EV++ + Sbjct: 325 FKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNEVVDKLQKEIRSR 380 >gi|281411733|ref|YP_003345812.1| prolyl-tRNA synthetase [Thermotoga naphthophila RKU-10] gi|281372836|gb|ADA66398.1| prolyl-tRNA synthetase [Thermotoga naphthophila RKU-10] Length = 577 Score = 229 bits (584), Expect = 7e-58, Method: Composition-based stats. Identities = 108/227 (47%), Positives = 156/227 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + P L+E P D E SH+ +LR G I + + GIY++LPLG++ L + I+REE Sbjct: 1 MRMKDLYAPTLKETPSDVETVSHEYLLRGGFIRKVAAGIYTYLPLGRRVLLKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P LQ A+LW +SGR+D YG EM++L DR+++ GPTHEE++TD+ ++ Sbjct: 61 MNRIGAQEILMPILQPAELWKQSGRWDDYGPEMMKLKDRHERDFTLGPTHEEIVTDLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP T YQI K+RDE+RPRFG++R+REF+MKDAYSF + E +Y + + Sbjct: 121 ELRSYKQLPLTLYQIANKYRDEIRPRFGLLRAREFIMKDAYSFHASWESLDETYEQFKKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 Y RI RLG++ + + AE+G IGG+ SHEF+V A GET V + Sbjct: 181 YSRIMERLGVRYMIIEAETGTIGGNASHEFVVPAKIGETNVLFCEKC 227 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 97/196 (49%), Gaps = 7/196 (3%) Query: 258 ATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 D+ D P + +GIE+GHIF GTKYS M A F +G+ MG Sbjct: 378 EWYDLRTVVEGDPCPVCGEPLKATKGIELGHIFKLGTKYSEAMKAYFMDENGEMKPFIMG 437 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YG G R +AAV+E HD G+IWP S+AP+ + + + +D + E IY LS+ Sbjct: 438 CYGWGVSRTMAAVVEHFHDENGMIWPLSIAPYTVVVDILNMNDAEQKQIGELIYQVLSEK 497 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE-- 433 G +V DD G +F ADL+GFP+++ VG + + + VE+K R + ++++ Sbjct: 498 GEEVVLDDREVSPGFKFKDADLIGFPIRINVG-RSLKEGVVELKKRYSKELVKVNIKNGF 556 Query: 434 --VINYASHRFSNNRP 447 ++ P Sbjct: 557 GALLETLEKMKREYDP 572 >gi|220931402|ref|YP_002508310.1| Threonyl-tRNA synthetase [Halothermothrix orenii H 168] gi|219992712|gb|ACL69315.1| Threonyl-tRNA synthetase [Halothermothrix orenii H 168] Length = 646 Score = 229 bits (584), Expect = 7e-58, Method: Composition-based stats. Identities = 80/444 (18%), Positives = 157/444 (35%), Gaps = 38/444 (8%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 L +L+E RD +L L M + +G+ P G K + + + +E+ + G Sbjct: 233 LKMLEEAKKRDHNKLGRELDLF--MTEESIGQGLPLLKPKGAKVVQILQRFVEDEEEKRG 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHIK 123 P + +DL+ SG +D Y ++M +++D+ + P I+ S ++ Sbjct: 291 YQLTKTPYMAKSDLYKISGHWDHYKEDMFILGDEEKDDEVLALRPMTCPFQFMIYNSKLR 350 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + + FR+E G++R R+F + + + TPE + + + Sbjct: 351 SYRDLPLRYSETSTLFRNEASGEMHGLIRVRQFTISEGHIIC-TPEQLEEEFRGVVNLIN 409 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + LG I D+ + F + + + D + Sbjct: 410 YMMETLG------------IEDDIWYRFSKWDPDNREKYIDNPTAWEESQDKMKNILDKL 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y D+ + + + I+ F ++ + T+ Sbjct: 458 NIDYVEAEGEAAFYGPKLDIQFRNVH---GKEDTIITVQID----FALPERFDM----TY 506 Query: 303 KGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D K + +G A++ + G W + I Sbjct: 507 IDKDNKKKRPYVIHRTSVGCYERTLAMLIEKYAGAFPTW------LAPVQVEIIPVSDDQ 560 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ L + G V DD E++G + A + P +IVG++ V + V ++ R Sbjct: 561 VDYAYEVKGILKEAGIRVEVDDTNEKLGYKIRQAQMEKIPYMLIVGNREVENRTVSVRDR 620 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 G +S++E Sbjct: 621 KEGDLGAISIKEFKEKIVREVEEK 644 >gi|225447618|ref|XP_002270988.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 670 Score = 229 bits (583), Expect = 8e-58, Method: Composition-based stats. Identities = 80/445 (17%), Positives = 150/445 (33%), Gaps = 42/445 (9%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L +E R D L L + I + G+ W P G + ++ Sbjct: 261 KAYLHFKEEAKRRDHRRLGQDLDLFS--IQDEAGGGLVFWHPKGAIVRHIIEDSWKKIHI 318 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P + ADLW SG D Y + M D+ P + I++ + Sbjct: 319 EHGYDLLYTPHVARADLWKTSGHLDFYRENMYSQITIEDELYQLRPMNCPYHILIYKRKL 378 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+ P ++ +R EL G+ R R F DA+ F L + + Sbjct: 379 HSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDE-IRGVLDLT 437 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I + G + + P + + D + + DD Sbjct: 438 EEILLQFGFSKYEVNLSTRP-----------------EKAVGADDIWEKATSALRDALDD 480 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ K+ D+L + S ++ F ++ T Sbjct: 481 KGWSYRIDEGGGAFYGPKIDL---KIEDALGRKWQCSTIQVD----FNLPQRFD----IT 529 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + ++ + + +G++ V+ + +P ++P + ++ + Sbjct: 530 YVDSNSEKQRPIMIHRAVLGSLERFFGVLI---EHYAGDFPLWLSPIQARVLPVT---DT 583 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + C ++ +L G GE++ ++ PL +VG K V V ++ Sbjct: 584 QLEYCNEVTNKLKANGIRAEV-CHGERLPKLIRNSEKQRIPLMAVVGPKEVETQTVTVRS 642 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R G M +E+ I+ N Sbjct: 643 RFGGELGTMIVEDFISRTKSATENR 667 >gi|262402773|ref|ZP_06079334.1| prolyl-tRNA synthetase [Vibrio sp. RC586] gi|262351555|gb|EEZ00688.1| prolyl-tRNA synthetase [Vibrio sp. RC586] Length = 571 Score = 229 bits (583), Expect = 8e-58, Method: Composition-based stats. Identities = 122/290 (42%), Positives = 168/290 (57%), Gaps = 20/290 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L L+E P DAE+ SHKLMLR GMI + + G+Y+WLP G + L V I+R+E Sbjct: 1 MRTSKYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVETIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GAIE +P +Q +LW E+GR + G E+LR DR+++ + PT EEV+T + R+ Sbjct: 61 IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE RPRFGVMR+REF M DAYSFD+ +G + SY+ M + Sbjct: 121 EVNSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFSMMDAYSFDIDKDGLQKSYDAMHAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN---- 236 Y + F R+GL P+ A+SG IGG+ S EF VLA++GE + D+ E Sbjct: 181 YCKAFDRMGLDYRPVLADSGAIGGNGSQEFHVLAESGEDLIVF-STESDYAANIEKAEAL 239 Query: 237 ---------------TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 D + ++ +VEQ P T K D++ Sbjct: 240 APATEAAAPTQEMTLVDTPNAKTIAELVEQHGLPIEKTVKTLFVKASDAI 289 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 68/190 (35%), Positives = 112/190 (58%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N D + + RGIEVGHIF GT YS M+ ++GK+ ++M Sbjct: 382 GKVEDLRNVVEGDPSPCGKGTLMLKRGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVAA IE +HD GIIWPD++APF+++++ + + ++A EK+YA L+ Sbjct: 442 GCYGIGVSRVVAAAIEQNHDDYGIIWPDALAPFQVAIVPMNMHKSERVQEAAEKLYAELT 501 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G +V +DD E+ G F+ +L+G P +I+G + + + E K+R G +E +++E Sbjct: 502 AAGIEVLFDDRKERPGVMFSDMELIGVPHTIIIGDRSMDEGHFEYKNRRQGEKEAVAMES 561 Query: 434 VINYASHRFS 443 +I++ + + Sbjct: 562 IIDFIQAKLA 571 >gi|150015022|ref|YP_001307276.1| prolyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] gi|189083493|sp|A6LPP0|SYP_CLOB8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|149901487|gb|ABR32320.1| prolyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] Length = 570 Score = 229 bits (583), Expect = 8e-58, Method: Composition-based stats. Identities = 123/265 (46%), Positives = 161/265 (60%), Gaps = 1/265 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+E P +AEI SHKLMLR GMI + + G+Y+++PLG K L V IIREE Sbjct: 1 MKMSNMLISTLREVPAEAEIDSHKLMLRAGMIRKMAAGVYNYMPLGLKVLKKVEDIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E + A+LW ESGR+D+YG EM RL DR D+ GPTHEEV TDI R+ Sbjct: 61 MNAAGAQEFLASAIIPAELWQESGRWDAYGAEMFRLKDRGDRDFCLGPTHEEVFTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFGVMRSREF+MKDAYSFD G +Y+KM + Sbjct: 121 EIKSYKQLPLNLYQIQTKYRDERRPRFGVMRSREFVMKDAYSFDKDQGGLDLAYDKMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF+R GL + + A+SG IGG S EF+V ++ GE V + ++ E Sbjct: 181 YVKIFNRCGLDAKCVAADSGAIGGSNSAEFMVKSEVGEDDVVFCSEC-NYAANIEKASSP 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 L ++ + +E Sbjct: 240 AEKELKQEFKEINKVETPNTKTIDE 264 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 109/210 (51%), Gaps = 4/210 (1%) Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSL 296 ++ + V D N + P K ARG EVGHIF GTKYS Sbjct: 359 ANETGYHINNVNYGRDFEGVIGDYRNVTEGEKCPVCGGKVTIARGTEVGHIFKLGTKYSE 418 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 M+A F DGK+ MG YGIG R +A++IE HD GI+WP SVAP+ +S+I + Sbjct: 419 AMNAKFIDEDGKEKPFIMGCYGIGVTRTMASIIEQHHDENGIVWPLSVAPYHVSVIPVNV 478 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D+ +IY +L+ G + DD E+ G +F ++L+G P+++ VG K ++D ++ Sbjct: 479 KDEEQARIANEIYEKLTSAGIEALLDDRNERAGVKFKDSELMGIPMRITVGKK-INDGEI 537 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNNR 446 E K R G E + +E+V N F N+ Sbjct: 538 EFKLRD-GEMEVIKIEDVYNIIKGEFEKNK 566 >gi|84516459|ref|ZP_01003818.1| threonyl-tRNA synthetase [Loktanella vestfoldensis SKA53] gi|84509495|gb|EAQ05953.1| threonyl-tRNA synthetase [Loktanella vestfoldensis SKA53] Length = 648 Score = 229 bits (583), Expect = 8e-58, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 144/442 (32%), Gaps = 44/442 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD ++ L + + + G W P G + +R Q G Sbjct: 237 LHRLEEAAKRDHRKLGREMNLF--HMQEEAPGQVFWHPDGWTIYTELQDYMRRRQRAGGY 294 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIFRSH 121 +E++ P + LW +SG +D Y + M + R P + IF Sbjct: 295 VEVNTPQVVDRKLWEKSGHWDKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQG 354 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR+LP + R E G+MR R F D + F + + + Sbjct: 355 LKSYRDLPLRMAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFCREDQIEPET-ARFIAF 413 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 R++ LG ++ + P S + + C DF + Sbjct: 414 LSRVYADLGFNDWTIKLSTRPEQRIGSDATWDMMEKALGD-ACRAAGYDFEL-------- 464 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 +E A Y + L D++ N + ++ + A Sbjct: 465 --------LEGEGAFYGPKLEF---TLTDAIGRNWQCGTLQVDANLP--------ERLDA 505 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G DG+ H + +G+ ++ H GK W +++ Sbjct: 506 EYIGTDGEKHRPVMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVATIV------S 559 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D + A L+ G D E+I + + P+ + VG++ V + + Sbjct: 560 DADDYARDLVAALTAAGVRAEADTRNEKINYKVREHSVGKVPVILAVGAREVEERTATAR 619 Query: 420 HRLTGIREDMSLEEVINYASHR 441 ++++E++ R Sbjct: 620 QLGETQTRVVTMDEIVAELKQR 641 >gi|209884754|ref|YP_002288611.1| threonyl-tRNA synthetase [Oligotropha carboxidovorans OM5] gi|209872950|gb|ACI92746.1| threonyl-tRNA synthetase [Oligotropha carboxidovorans OM5] Length = 680 Score = 229 bits (583), Expect = 8e-58, Method: Composition-based stats. Identities = 74/443 (16%), Positives = 136/443 (30%), Gaps = 39/443 (8%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E RD ++ L + G+ W G + A +R Sbjct: 256 YLKQLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHAKGWTVFQEIIAYMRRRL-AAD 312 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-----KAMIYGPTHEEVMTDIFRS 120 E++ P + LW SG ++ Y + M D + P + IF+ Sbjct: 313 YDEVNAPQMLDKSLWETSGHWEWYRENMFAAQSAGDEAEDKRWFAIKPMNCPGHVLIFKH 372 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR LP + + R E G+MR R F DA+ F + ++ + Sbjct: 373 GLKSYRELPIRLAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEQQLAEECLKINDL 432 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + ++ + P S A++ + S N Sbjct: 433 ILSTYADFGFEGELTVKLSTRPDKRVGSDAAWDHAES-----VMTTVLEQIKAKSGNRIT 487 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 I A Y + L D++ + ++ FG Sbjct: 488 TSI------NPGEGAFYGPKFEY---VLRDAIGREWQCGTTQVDFNLPERFG-------- 530 Query: 300 ATFKGAD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + K V + G++ A ++ + G +W V ++ + Sbjct: 531 AFYIDEHSNKVAPVMVHRAICGSLERFAGILIEHYAGHFPLWLAPVQAVITTITSDGD-- 588 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D +++ G V D E+I + L P ++VG K V I Sbjct: 589 ----DYAREVFEACRAAGLRVDIDLRNEKINYKVREHSLAKVPALLVVGKKEAETRAVSI 644 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + L+E + + Sbjct: 645 RRLGKEGSSVVPLDEALKALTTE 667 >gi|16800424|ref|NP_470692.1| prolyl-tRNA synthetase [Listeria innocua Clip11262] gi|81853975|sp|Q92C35|SYP_LISIN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|16413829|emb|CAC96587.1| prolyl-tRNA synthetase [Listeria innocua Clip11262] Length = 568 Score = 229 bits (583), Expect = 8e-58, Method: Composition-based stats. Identities = 120/271 (44%), Positives = 164/271 (60%), Gaps = 1/271 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + AI+REE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQVASGIYSYLPLATLTLRKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA EM +P LQ A+LW ESGR+ YG E++RL DR + + GPTHEE++T + R Sbjct: 61 LEAIGAAEMLMPALQPAELWHESGRWADYGPELMRLKDRAARDFVLGPTHEELITSLLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E ++ M + Sbjct: 121 EIKSYKRLPITLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDETFELMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D+ +E Sbjct: 181 YSNIFSRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYSD-ASDYAANTEMAPVL 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + + +E+ A + + + L Sbjct: 240 YMEKKSHELEKELEKVATENQKTIADIVEFL 270 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 66/180 (36%), Positives = 101/180 (56%), Gaps = 3/180 (1%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ + D P+ + V GIEVGHIF GTKYS M+AT +G+ + MG YG Sbjct: 383 DLRMIQAGDLSPDGQGVIKFAEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R+++A+ E S+D G++W ++PF + LI + + E +Y L K G Sbjct: 443 IGLSRILSAIAEQSNDENGLVWDKQISPFDLHLIPVNMKSEEQVAFAESLYDSLQKAGFS 502 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G +FA ADL+G P+++ VG K ++ VE+K R TG ++ +E++N Sbjct: 503 VLIDDRTERAGVKFADADLIGLPIRITVGKK-AAEGIVEVKIRKTGEMIEVRQDELLNTL 561 >gi|162147243|ref|YP_001601704.1| threonyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|209544293|ref|YP_002276522.1| threonyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|189083610|sp|A9HFP5|SYT_GLUDA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|161785820|emb|CAP55391.1| Threonyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|209531970|gb|ACI51907.1| threonyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] Length = 641 Score = 229 bits (583), Expect = 8e-58, Method: Composition-based stats. Identities = 87/427 (20%), Positives = 143/427 (33%), Gaps = 41/427 (9%) Query: 8 LPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E R D ++ L I + + G W P G + + +R Q R G Sbjct: 233 LHRLEEAERRDHRRIGREMDLF--HIQEEAVGSIFWHPKGWRLYTALQDYMRRAQTRGGY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLA-DRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L LW SG +D Y + M + DK + P + IFR ++SY Sbjct: 291 QEVRTPQLVDRALWEASGHWDKYREHMFIATVEDEDKTLALKPMNCPCHVQIFRHGLRSY 350 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R E G+MR R F DA+ F T + + Sbjct: 351 RELPLRMAEFGACHRYEPSGALHGIMRVRSFTQDDAHIFC-TESQIAAETARFVRMLAEV 409 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + LG +S ++ P S E D + Sbjct: 410 YADLGFESFRVKFADRPEQRAGSDE-----------------TWDRAEGALIEACRLAGV 452 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D++ + + ++ + A+F G Sbjct: 453 EYEYNPGEGAFYGPKLEF---VLRDAIGRDWQCGTLQVDYVLP--------ERLDASFVG 501 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D H + +G+ ++ H G+ +W V S++ Sbjct: 502 EDSARHRPVMLHRAILGSFERFLGILIEQHAGRFPLWLAPVQVVVASIVT------DAAP 555 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E++ L++ G V D E+I ++ L P+ ++VG K D V I+ Sbjct: 556 YAEQVAETLTQAGLVVETDIRNEKINAKVREHSLARVPVILVVGRKEAEDGTVAIRRLGG 615 Query: 424 GIREDMS 430 +E MS Sbjct: 616 AAQEVMS 622 >gi|108804139|ref|YP_644076.1| Ser-tRNA(Thr) hydrolase/threonyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941] gi|123368184|sp|Q1AWG4|SYT_RUBXD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|108765382|gb|ABG04264.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941] Length = 639 Score = 229 bits (583), Expect = 8e-58, Method: Composition-based stats. Identities = 76/448 (16%), Positives = 135/448 (30%), Gaps = 34/448 (7%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ + +L L+E RD +L L T GI +LP G+ + +RE Sbjct: 223 KQLRAYLKRLEEARARDHRRLGRELGLFTFAPEDVGPGIPLFLPKGETLRHLMEGFVREV 282 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 Q R G + L + L+ SG + Y M + + P + +F S Sbjct: 283 QTRHGYQHVWTGHLVNERLYARSGHLEHYRDAMFPPMRDGEVSYRLKPMNCPSHMTLFNS 342 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SYR LP + + +R E + L +D T E + + + Sbjct: 343 RPRSYRELPVRYAEFATLYRYEKSGELSGLTRVRSLTQDDAHVFCTEEQVQEEFARALAI 402 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + G +R D + ++ + D Sbjct: 403 IREVLDAYGFTDYRVRLSLR--------------DPEGGKYIADEEKWGRAEGALRAALD 448 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 A Y +D D L ++S ++ G Sbjct: 449 AAGIDYEPAPGEAAFYGPKADFM---ARDVLGREWQLSTIQVDFIQPGRLG--------C 497 Query: 301 TFKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G DG+ H + G AV+ + G +W V I + Sbjct: 498 EYVGEDGERHTPVLLHRAVTGTTERFMAVLIEHYAGAFPVWLSPVQAVVIPVA------D 551 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + ++ LS+ G V DD + + P +IVG + V ++ Sbjct: 552 RHLEYARRVREELSEGGLRVEVDDSPNSMQKKIRENARQKTPYLLIVGDREEEAGTVNVR 611 Query: 420 HRLTGI-REDMSLEEVINYASHRFSNNR 446 R G + +M L + + R Sbjct: 612 RRGEGKRQTEMGLRGFLERVRGEVAARR 639 >gi|319649526|ref|ZP_08003682.1| prolyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] gi|317398688|gb|EFV79370.1| prolyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] Length = 567 Score = 229 bits (583), Expect = 8e-58, Method: Composition-based stats. Identities = 118/282 (41%), Positives = 170/282 (60%), Gaps = 1/282 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S +P L+E P DAE SH+L+LR G I Q++ GIYS++PL +K L V AIIREE Sbjct: 1 MKQSMTLIPTLKEVPADAETRSHQLLLRAGFIRQNASGIYSYMPLAKKVLQKVEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P LQ A+LW ESGR+ +YG E++R+ DR+++ G THEEV+T + R Sbjct: 61 MDNAGAVELLMPALQQAELWQESGRWYTYGPELMRMKDRHEREFALGATHEEVITSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ KFRDE RPRFG++R REF+MKDAYSF E Y+K+F + Sbjct: 121 AVKSYKKLPLALYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHSNQESLDEMYDKLFTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F R GL + A+SG +GG +HEF+VL++ GE + S ++ E Sbjct: 181 YSNVFRRCGLNFRAVIADSGAMGGKDTHEFMVLSEVGEDTIAYSDT-SEYAANIEMAPVL 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 S ++ Q A + E++ L K + + Sbjct: 240 AQYSKSNEEPQELEKAATENKKTIEEVSTFLNVAKEQCIKTL 281 Score = 162 bits (411), Expect = 8e-38, Method: Composition-based stats. Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 3/221 (1%) Query: 222 FCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA-- 279 + ++ + ++ I + +D+ + D P+ + Sbjct: 343 IIADHAVEAIVNGVCGANEEGIHYVNANPDRDFYVTRYADLRFIQEGDPSPDGQGTIQFA 402 Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF GT+YS M ATF +G+ + MG YGIG R +AAV E D G I Sbjct: 403 KGIEVGHIFKLGTRYSEAMEATFLDENGRTQPMIMGCYGIGVSRTMAAVAEQFSDENGFI 462 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 WP S+APF + LI I D+ E++Y L + DV DD E+ G +FA +DL+G Sbjct: 463 WPRSLAPFDLHLIPINMKDETQSAVAEELYTMLKRDRYDVLMDDRQERPGVKFADSDLIG 522 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 P+++ VG K S+ VE+K R TG +++ +++ + + Sbjct: 523 LPIRITVGKK-ASEGIVEVKVRKTGEMQEIHKDQLADKIAE 562 >gi|253576294|ref|ZP_04853624.1| prolyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844187|gb|EES72205.1| prolyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 571 Score = 229 bits (583), Expect = 8e-58, Method: Composition-based stats. Identities = 121/238 (50%), Positives = 154/238 (64%), Gaps = 2/238 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ P L+E P DAE ASH+ +LR G I Q + GIYS+LPLG+K L + I+REE Sbjct: 1 MRQSRLLSPTLREAPSDAEAASHQHLLRAGYIRQLAAGIYSYLPLGRKVLLRIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P +Q A+LW SGRY+ YG E++R DR+D+ GPTHEEV+T + R Sbjct: 61 MNRAGAQELLLPAMQPAELWQRSGRYERYGPELIRFKDRHDREFALGPTHEEVITSLLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP T YQIQ KFRDE RPRFG++R REFLMKDAYSFD G +Y M + Sbjct: 121 EVNSYRQLPLTVYQIQTKFRDERRPRFGLLRGREFLMKDAYSFDTDWTGLDRAYQSMVSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGD-LSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y +IF R GLK + A+ G IGG+ +HEF+ LAD GE V D+ E Sbjct: 181 YEKIFRRCGLKFRAVEADPGTIGGEGGTHEFMALADIGE-DVVAVCGNCDYAANLEKA 237 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 73/189 (38%), Positives = 104/189 (55%), Gaps = 4/189 (2%) Query: 253 TAPYAATSDVHNEKLFDSLPENK---RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 P A+ D N D+ P K RGIEVGH+F GT+YS + A F A G Sbjct: 378 DVPEASIGDFRNVVNGDACPRCKEGRLQLLRGIEVGHVFKLGTRYSEQLGAVFLDAQGHQ 437 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + MG YGIG R+++A+ E HD G+IWP S+AP+++ +I I + + + ++Y Sbjct: 438 QPMIMGCYGIGLSRLMSAIAEQHHDEHGLIWPVSIAPYQVHIIPISVTNPLQMELALQLY 497 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +L++ G DV DD E+ GS+F ADL+G P +VI+G K +VE R RE + Sbjct: 498 EKLTQAGIDVLLDDRDERPGSKFHDADLIGIPYRVIIG-KSAEQGQVEWVERNIMKRELI 556 Query: 430 SLEEVINYA 438 SLEE I Sbjct: 557 SLEEAIQRI 565 >gi|195941538|ref|ZP_03086920.1| threonyl-tRNA synthetase (thrZ) [Borrelia burgdorferi 80a] gi|312149456|gb|ADQ29527.1| threonyl-tRNA synthetase [Borrelia burgdorferi N40] Length = 581 Score = 229 bits (583), Expect = 9e-58, Method: Composition-based stats. Identities = 71/443 (16%), Positives = 156/443 (35%), Gaps = 37/443 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L + +E RD +L L + + G+ + P G K + REE ++ Sbjct: 172 RSYLNLREEIKKRDHRKLGKELDLFSIH-EEIGPGLVFFHPNGAKIRALIEDFWREEHSK 230 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + LW SG D Y M + + P + I+ + Sbjct: 231 NGYDILFTPHIGKSWLWQTSGHLDFYKDSMFEKIEMDKSDYYLKPMNCPFHIAIYNTGKH 290 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LPF + ++ +R E G+MR+R F DA+ + ++ + Sbjct: 291 SYRDLPFRWAELGTVYRYEKIGALHGMMRARGFTQDDAHIICTHSQVLDE-IKEVLRFAI 349 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ + G ++ + P + + + + D Sbjct: 350 YMWSKFGFSNLKAYLSTKP-----------------DKSVGNDSDWEMSLKVLEETLSDF 392 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I + A Y D+ K+ DSL ++S + F ++++ +A Sbjct: 393 EVPYEIDKGGGAFYGPKIDL---KIVDSLEREWQMSTIQFD----FNLPERFNMTYTAE- 444 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ ++ + G +W V I + NI Sbjct: 445 --DGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPLWLSPVQVVIIPVNNI------VE 496 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D K++ + G + D+ ++ ++ P I+G + ++ ++ I+ R Sbjct: 497 DYAIKVFNKFKNEGIRIKLDNSSSRMNAKIREYQAKKIPYMFIIGEREATEERISIRTRT 556 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L+E + + + + Sbjct: 557 NEQINGIKLDEALKFILFKIRDK 579 >gi|258647088|ref|ZP_05734557.1| threonine--tRNA ligase [Prevotella tannerae ATCC 51259] gi|260853035|gb|EEX72904.1| threonine--tRNA ligase [Prevotella tannerae ATCC 51259] Length = 647 Score = 229 bits (583), Expect = 9e-58, Method: Composition-based stats. Identities = 79/444 (17%), Positives = 152/444 (34%), Gaps = 39/444 (8%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +L +L+E R D ++ L M + KG+ WLP G + + +R+ Q R Sbjct: 232 YLQLLEEAKRRDHRKIGREMELF--MFSELVGKGLPIWLPKGTVLRQQLMSFLRKIQKRF 289 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 G +E+ P + S +L+V SG Y YGK+ + + + P + ++ Sbjct: 290 GYMEVITPHIGSKNLYVTSGHYAKYGKDSFQAIHTPEEGEEYMLKPMNCPHHCAVYSWQP 349 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP + +R E G+ R R F DA+ F + + + ++ Sbjct: 350 HSYKDLPLRIAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCRPDQVKQE-FLRVMDII 408 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + +F L + + + S D D + ++ Sbjct: 409 MIVFRALNFEQFEAQISLRDKVKRE-------------KYIGSDDVWDKAEQAIIEACEE 455 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I A Y D + D+L ++ ++ Sbjct: 456 KGLQAKIEYGEAAFYGPKLDFM---VKDALGRRWQLGTIQVDYNLP--------ERFQLE 504 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G D K H + G++ AV+ G +W I + Sbjct: 505 YTGEDSKKHRPVMIHRAPFGSLERFTAVLIEHTGGHFPLW------LMPDQCVILPISER 558 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D K+ +L G D+ E++G + ++ P ++VG K +D V ++ Sbjct: 559 FNDYAHKVKEQLEAAGIRANIDERNEKVGRKIRDNEMKHIPYLLVVGEKEQADGSVNVRK 618 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 + G +E M++ + Sbjct: 619 QGEGTQETMTIPMFAEKVLKEVAE 642 >gi|216264494|ref|ZP_03436486.1| threonyl-tRNA synthetase [Borrelia burgdorferi 156a] gi|215980967|gb|EEC21774.1| threonyl-tRNA synthetase [Borrelia burgdorferi 156a] Length = 581 Score = 229 bits (583), Expect = 9e-58, Method: Composition-based stats. Identities = 72/443 (16%), Positives = 156/443 (35%), Gaps = 37/443 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L + +E RD +L L + + G+ + P G K + REE ++ Sbjct: 172 RSYLNLREEIKKRDHRKLGKELDLFSIH-EEIGPGLVFFHPNGAKIRALIEDFWREEHSK 230 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + LW SG D Y M + + P + I+ + Sbjct: 231 NGYDILFTPHIGKSWLWQTSGHLDFYKDSMFEKIEMDKSDYYLKPMNCPFHIAIYNTGKH 290 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LPF + ++ +R E G+MR+R F DA+ + ++ + Sbjct: 291 SYRDLPFRWAELGTVYRYEKIGALHGMMRARGFTQDDAHIICTHSQVLDE-IKEVLRFAI 349 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ + G ++ + P + + + + D Sbjct: 350 YMWSKFGFSNLKAYLSTKP-----------------DKSVGNDSDWEMSLKVLEETLSDF 392 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I + A Y D+ K+ DSL ++S + F ++++ +A Sbjct: 393 EVPYEIDKGGGAFYGPKIDL---KIVDSLEREWQMSTIQFD----FNLPERFNMTYTAE- 444 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ ++ + G +W V I + NI Sbjct: 445 --DGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPLWLSPVQVVIIPVNNI------VE 496 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D K++ + G + D+ ++ ++ P I+G + ++ ++ I+ R Sbjct: 497 DYAIKVFNKFKNEGIRIKLDNSSSRMNAKIREYQAKKIPYMFIIGEREATEERISIRTRT 556 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 M L+E + + + + Sbjct: 557 NEQINGMKLDEALKFILFKIRDK 579 >gi|312132188|ref|YP_003999528.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Leadbetterella byssophila DSM 17132] gi|311908734|gb|ADQ19175.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Leadbetterella byssophila DSM 17132] Length = 650 Score = 229 bits (583), Expect = 9e-58, Method: Composition-based stats. Identities = 81/439 (18%), Positives = 157/439 (35%), Gaps = 36/439 (8%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L + T + KG+ WLP G + + ++ Q R+G + + P Sbjct: 239 AKRRDHRKLGAELEIFT-FSEKVGKGLPLWLPKGAMLRERLENFLKRAQLRSGYLPVVTP 297 Query: 73 TLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 + S L+V SG +D YG++ + + + P + +IF+S +SYR+LP Sbjct: 298 HIGSKQLYVTSGHWDKYGEDSFQPIKTPEEGEEFMLKPMNCPHHCEIFKSKPRSYRDLPL 357 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + +R E G+ R R F DA+ F + + K+ L +F LG Sbjct: 358 RLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFCANDQVEDE-FKKVIDLVLYVFKSLG 416 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + ++ S + D + + + Sbjct: 417 FDDYSAQVSLRSLE-------------NRSKYIGSDEDWDKAEKAIVNAAAEKGLKTVVE 463 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D + D+L ++ ++ + G+D + Sbjct: 464 YGEAAFYGPKLDFM---VKDALGRKWQLGTIQVDYNLP--------KRFDLEYVGSDNQK 512 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 H + G+M A++ + G W I + + D ++ Sbjct: 513 HRPVMIHRAPFGSMERFIAILLENTAGNFPFW------LSPEQIAVLPISEKYEDFANEV 566 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 + L + + D E+I + A++ PL +IVG K + +V ++ + G Sbjct: 567 FLILQENDIRGYIDHRAEKISRKIRDAEVAKVPLMLIVGEKEQEEGRVSVRKKGEGDLGS 626 Query: 429 MSLEEVINYASHRFSNNRP 447 S++E I +A + + N P Sbjct: 627 FSVQEFIEFAKNEINKNIP 645 >gi|291440752|ref|ZP_06580142.1| threonyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672] gi|291343647|gb|EFE70603.1| threonyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672] Length = 658 Score = 229 bits (583), Expect = 9e-58, Method: Composition-based stats. Identities = 73/439 (16%), Positives = 138/439 (31%), Gaps = 36/439 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD H+L L + + Q G+ + P G + R G + Sbjct: 254 EAEKRDHRKLGHELDLFS-IPEQIGSGLAVFHPKGGIVRRVMEDYSRRRHEEEGYEFVYT 312 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P L+ SG D Y M P + + IF + +SYR LP Sbjct: 313 PHATKGKLFETSGHLDWYADGMYPPMQLDEGVDYYLKPMNCPMHNLIFDARGRSYRELPL 372 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 ++ +R E G+ R+R F DA+ + + S+ +K L + G Sbjct: 373 RLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQMSEEL-DKTLTFVLNLLRDYG 431 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 L + + + + + + + + Sbjct: 432 LTDFYLELST----------------KDPEKFVGTDEAWEEATETLRQVAEKQGLPLVPD 475 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y + + D++ ++S ++ F ++ L +A K Sbjct: 476 PGGAAFYGPKI---SVQAKDAIGRTWQMSTIQLD----FNLPERFDLEYTAA---DGSKT 525 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + G++ AV+ + +P +AP + I I + EK Sbjct: 526 RPVMIHRALFGSIERFFAVLL---EHYAGAFPAWLAPVQAVGIPIG---DAHVEHLEKFA 579 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 A K G V D +++ + A P VI G + +++ V ++R + Sbjct: 580 AAARKQGLRVEVDSSSDRMQKKIRNAQKQKVPFMVIAGDEDMANGAVSFRYRDGSQENGI 639 Query: 430 SLEEVINYASHRFSNNRPV 448 ++E I V Sbjct: 640 PVDEAIAKIVKVVEERAQV 658 >gi|225551832|ref|ZP_03772775.1| threonyl-tRNA synthetase [Borrelia sp. SV1] gi|225371627|gb|EEH01054.1| threonyl-tRNA synthetase [Borrelia sp. SV1] Length = 581 Score = 229 bits (583), Expect = 9e-58, Method: Composition-based stats. Identities = 71/443 (16%), Positives = 156/443 (35%), Gaps = 37/443 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L + +E RD +L L + + G+ + P G K + REE ++ Sbjct: 172 RSYLNLREEIKKRDHRKLGKELDLFSIH-EEIGPGLVFFHPNGAKIRALIEDFWREEHSK 230 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + LW SG D Y M + + P + I+ + Sbjct: 231 NGYDILFTPHVGKSWLWQTSGHLDFYKDSMFAKIEMDKSDYYLKPMNCPFHIAIYNTGKH 290 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LPF + ++ +R E G+MR+R F DA+ + ++ + Sbjct: 291 SYRDLPFRWAELGTVYRYEKIGALHGMMRARGFTQDDAHIICTHSQVLDE-IKEVLRFAI 349 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ + G ++ + P + + + + D Sbjct: 350 YMWSKFGFSNLKAYLSTKP-----------------DKSVGNDSDWEMSLKVLEETLSDF 392 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I + A Y D+ K+ DSL ++S + F ++++ +A Sbjct: 393 EVPYEIDKGGGAFYGPKIDL---KIVDSLEREWQMSTIQFD----FNLPERFNMTYTAE- 444 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ ++ + G +W V I + NI Sbjct: 445 --DGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPLWLSPVQVVIIPVNNI------VE 496 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D K++ + G + D+ ++ ++ P I+G + ++ ++ I+ R Sbjct: 497 DYAIKVFNKFKNEGIRIKLDNSSSRMNAKIREYQAKKIPYMFIIGEREATEERISIRTRT 556 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L+E + + + + Sbjct: 557 NEQINGIKLDEALKFILFKIRDK 579 >gi|150019972|ref|YP_001305326.1| prolyl-tRNA synthetase [Thermosipho melanesiensis BI429] gi|166980168|sp|A6LJ40|SYP_THEM4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|149792493|gb|ABR29941.1| prolyl-tRNA synthetase [Thermosipho melanesiensis BI429] Length = 564 Score = 229 bits (583), Expect = 9e-58, Method: Composition-based stats. Identities = 107/252 (42%), Positives = 159/252 (63%), Gaps = 2/252 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ + P L+ENP DAEI S L+ R G I + + G+Y++LPL ++ L + I+REE Sbjct: 1 MRFSQLYAPTLRENPADAEIPSQALLQRAGFIRKIAAGVYTYLPLARRTLLKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P +Q A+LW++SGR+D YG EM++L DR+++ GPTHEE++T++ ++ Sbjct: 61 MDRIGAQEILMPIIQPAELWIKSGRWDDYGPEMMKLKDRHNRDFTLGPTHEELVTELVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP T YQI K+RDE+RPRFGV+R+REF+MKDAYSF + E Y K + Sbjct: 121 ELNSYKQLPVTLYQIANKYRDEIRPRFGVLRAREFIMKDAYSFHDSWESLDEVYKKFKEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RI R+GL+ + A SG IGG SHEF+ A+ GE+ + + E + Sbjct: 181 YSRILERIGLRYTVIEASSGAIGGKESHEFVAFAEYGESNILYCDCG--YAGSDEKVPYM 238 Query: 241 DIISLNSIVEQW 252 + E+ Sbjct: 239 GEYEVFDEDEKE 250 Score = 139 bits (351), Expect = 7e-31, Method: Composition-based stats. Identities = 73/190 (38%), Positives = 99/190 (52%), Gaps = 8/190 (4%) Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + VE+W A V N + S RGIE+GHIF GTKYS M + Sbjct: 373 DFQVEEW-----ADLVVVNPGEPCPVCGKPLKSERGIELGHIFKLGTKYSETMDVKYMNK 427 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 DGK MG YG G R + A++E HD GIIWP SVAP+++ + + ++ + Sbjct: 428 DGKMKPFIMGCYGWGISRTLGAIVEQLHDDNGIIWPVSVAPYEVVITVVGKENE--KSFA 485 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 EK+Y L G DV DD G +F ADL+GFPL++ +G K D KVE+K R+ + Sbjct: 486 EKLYRYLLDKGVDVLIDDRDVSPGVKFKDADLIGFPLRITIG-KSYKDGKVELKERVGNV 544 Query: 426 REDMSLEEVI 435 + EEVI Sbjct: 545 TIIEADEEVI 554 >gi|325848534|ref|ZP_08170194.1| threonine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480762|gb|EGC83819.1| threonine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 641 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 72/442 (16%), Positives = 139/442 (31%), Gaps = 42/442 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 ++ + +E R D ++ L + H+ + G + G + + G Sbjct: 233 YIKLQEEAKRRDHRRIGKEMNLFS--FHEEAPGFPFFKENGMILRHELLNWWTDVLAENG 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + +LW SG +D Y + M + + P + ++ SY Sbjct: 291 YGEIQTPLIMNEELWHRSGHWDHYKENM-YFTKIDGENYAVKPMNCPGSVLVYGEEPHSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R EL G+ R R F DA+ + L + + + Sbjct: 350 RDLPIRLAEYGQVHRHELSGALHGLFRVRTFTQDDAHVYCLPSQVKDEVFKM-IDLADLL 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K + P E DF + + Sbjct: 409 YSTFGFKYKI-ELSTRPDDFMGKIE-----------------EWDFAEKALEDALKERGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I + A Y D H E + R + G I + T+ Sbjct: 451 DYQINPKDGAFYGPKIDFHLEDA----------AKRTWQCGTI-QLDFQLPQNFDLTYID 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G+ + +G++ + G+ +W + I D Sbjct: 500 ENGEKKRPVMLHRALLGSVERFIGSVTEQFAGRFPLW------INPKQVAIIPVSDKFAD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + ++ K G V D E +G + A L+ ++VG K+ +++R Sbjct: 554 FADDLAKKIKKAGYRVDVDHRSEGVGYKIRQAQLMRTNYMLVVGENEEKSGKLTVRNRDG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 +D+S EE I + + Sbjct: 614 EETKDVSFEEFIEKLNQERDSK 635 >gi|67922129|ref|ZP_00515644.1| Prolyl-tRNA synthetase, bacterial [Crocosphaera watsonii WH 8501] gi|67856029|gb|EAM51273.1| Prolyl-tRNA synthetase, bacterial [Crocosphaera watsonii WH 8501] Length = 602 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 112/240 (46%), Positives = 151/240 (62%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + GIY++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLREDPAEAEIPSHKLLLRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N GA E +P LQ ++LW ESGR+++Y K M L DR ++ + GPTHEEV+T + Sbjct: 61 MNAAGAQECLLPQLQPSELWKESGRWETYTKAEGIMFSLIDRQERELGLGPTHEEVITTV 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF+ + SY M Sbjct: 121 AKDMIRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFNEDEASLQKSYEAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y I R GL + A+SG IGG S EF++LA+ GE +V ++D + E Sbjct: 181 DRAYRNIISRCGLAYRAVEADSGAIGGSASQEFMILAEAGEDEVLYTEDG-KYAANIEKA 239 Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 62/175 (35%), Positives = 97/175 (55%), Gaps = 1/175 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P SARGIEVGHIF GTKYS M ATF +G + + MG YG+G R+ A +E Sbjct: 427 PSQILASARGIEVGHIFQLGTKYSQAMGATFTDENGAEKPIVMGCYGVGVSRLAQASVEQ 486 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 S+D GIIWP ++ P+ +I D+ + + +Y +L+K+G + DD E+ G + Sbjct: 487 SYDKDGIIWPVAITPYHAIIIVPNIKDKNQMEVAQNLYNQLNKIGVETLLDDRDERAGVK 546 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 F ADL+G P +V+ G + + KVE+ R T +++ + ++ + N + Sbjct: 547 FKDADLIGIPYRVVTG-RSLKAGKVEVVTRQTKESQEIEVTNLVETLKNWLKNIK 600 >gi|315639344|ref|ZP_07894506.1| threonine--tRNA ligase [Campylobacter upsaliensis JV21] gi|315480670|gb|EFU71312.1| threonine--tRNA ligase [Campylobacter upsaliensis JV21] Length = 602 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 76/443 (17%), Positives = 158/443 (35%), Gaps = 38/443 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y I + RD ++L L T Q G+ WL G + + ++ + Sbjct: 194 LKEYLHIIEEAKKRDHRKLGNELKLFT-FDEQIGGGLPIWLSNGARLRSKLEQMLYKIHR 252 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P L A+ W SG Y +Y + M + +++ P + I+++ + Sbjct: 253 LRGYEPVRGPELLKAEAWKISGHYANYKENM-YFTNIDEQEYGIKPMNCVGHIKIYQNEV 311 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP F++ + R E G+ R REF DA+ F + P K ++ Sbjct: 312 RSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCM-PSQIKEQVLEILDFV 370 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + E+ + T + + + + D+ Sbjct: 371 ------------------ASLMKIFDFEYEMEISTRPEKAIGDEAIWEVATKALKEALDE 412 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ K+ D+L + ++ F +Y+ +A Sbjct: 413 QGLKYGIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVDFNLPERFELEYTSSENAK 469 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + V + +G+ ++ + + + I +V Sbjct: 470 -------ERPVMLHRAILGSFERFIGILTEHC------AGEFPFFIAPTQVGIVPISEVH 516 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + I L ++G D D E + + A+ P+ +++G + +S+ V ++ R Sbjct: 517 LAYAKGIQRTLLEMGVDSEIYDKNESLSKKIRNAEKQKLPMILVIGDEELSNRAVALRDR 576 Query: 422 LTGIREDMSLEEVINYASHRFSN 444 ++ +SL+E +N + + Sbjct: 577 RAKEQKSLSLDEFMNLIKEKINE 599 >gi|237752912|ref|ZP_04583392.1| threonyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430] gi|229375179|gb|EEO25270.1| threonyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430] Length = 605 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 71/444 (15%), Positives = 151/444 (34%), Gaps = 40/444 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD ++ L T + G+ WLP G + N+ ++ + Sbjct: 197 LTQYLHQLEEAKKRDHRKVGVEMELFT-FDEEVGAGLPIWLPKGARLRRNLENLLTQALI 255 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P + + +W SG Y +YG+ M ++ P + ++++ + Sbjct: 256 ERGYEPVRGPEILKSAVWKTSGHYANYGENM-YFTTIDEVEYGIKPMNCVGHIKVYQNSL 314 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR LP FY+ + R E G++R REF DA+ F + + + Sbjct: 315 HSYRELPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCRPSQIASE-VESIIDFT 373 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +I + G + P S E + + + Sbjct: 374 QKIMNAFGFSYEM-EISTKPEKSIGSEE-----------------VWEEATQALKGALER 415 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ K+ D++ + I++ + T Sbjct: 416 CGIAYKIDEGGGAFYGPKIDI---KITDAIGRKWQCGTVQIDMNLP--------ERFALT 464 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + + + +G+ A++ G+ + I + + Sbjct: 465 YTDENNSTQQPVMIHRAILGSFERFVAILTEHFGGEFPFFVAPTQVIIIPI------SEA 518 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + ++++ L KVG ++ E + + A+ P+ ++G+K + V ++ Sbjct: 519 QYNYAKELHNALLKVGVYAEIENKNETLNKRIRNAEKQRVPMIAVLGAKEKEERLVAVRD 578 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R + +MS E I + Sbjct: 579 RRLKEQSNMSFESFITLTKEKMRE 602 >gi|182420015|ref|ZP_02951249.1| prolyl-tRNA synthetase [Clostridium butyricum 5521] gi|237666786|ref|ZP_04526771.1| proline--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376052|gb|EDT73639.1| prolyl-tRNA synthetase [Clostridium butyricum 5521] gi|237657985|gb|EEP55540.1| proline--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 570 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 120/237 (50%), Positives = 155/237 (65%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+E P +AEI SHKLMLR GMI + + GIY+++PLG K L NV I+REE Sbjct: 1 MKMSNMLISTLREVPAEAEIDSHKLMLRAGMIRKMAAGIYNYMPLGLKVLKNVEDIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E + A+LW ESGR+D+YG EM R+ DR + GPTHEEV TDI R+ Sbjct: 61 MNAAGAQEFLASAMIPAELWQESGRWDAYGAEMFRVKDRGARDFCLGPTHEEVFTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFGVMRSREF+MKDAYSFD +G +NKM + Sbjct: 121 EIKSYKQLPLNLYQIQTKYRDERRPRFGVMRSREFIMKDAYSFDKDQDGLDIVFNKMHDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y++IF+R GL + + A+SG IGG S EF+V ++ GE V + ++ E Sbjct: 181 YVKIFNRCGLDAKCVEADSGAIGGSNSAEFMVKSEVGEDDVVFCSEC-NYAANIEKA 236 Score = 162 bits (410), Expect = 9e-38, Method: Composition-based stats. Identities = 75/209 (35%), Positives = 105/209 (50%), Gaps = 4/209 (1%) Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSL 296 ++ V D N + P RG EVGHIF GTKYS Sbjct: 359 ANETGYHVENVNYGRDFEGTVGDFRNVTEGEKCPCCGAPINIARGTEVGHIFKLGTKYSD 418 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 M+A F DGK+ MG YGIG R +A++IE HD GIIWP SVAP+ IS+I + Sbjct: 419 AMNANFIDEDGKEKPFVMGCYGIGVTRTMASIIEQHHDENGIIWPLSVAPYHISVIPVNV 478 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D+ ++Y +L +G +V DD E+ G +F ++L+G P++V VG K ++D +V Sbjct: 479 KDEEQVKIATELYDQLFSMGVEVLLDDRNERAGVKFKDSELMGIPMRVTVGKK-ITDGEV 537 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 E K R G E + + +V N F N Sbjct: 538 EFKLRD-GDMEVIKISDVCNIVKGEFEKN 565 >gi|217076405|ref|YP_002334121.1| prolyl-tRNA synthetase [Thermosipho africanus TCF52B] gi|226701439|sp|B7IFB6|SYP_THEAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|217036258|gb|ACJ74780.1| prolyl-tRNA synthetase [Thermosipho africanus TCF52B] Length = 561 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 111/289 (38%), Positives = 169/289 (58%), Gaps = 6/289 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ + P L+E+P DAEI S L+ R G I + + G+Y++LPL ++ L + I+REE Sbjct: 1 MRFSRLYAPTLREDPSDAEIPSQALLQRAGFIRKIAAGVYTYLPLARRTLLKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+ +P +Q A+LW SGR+D YG EM++L DR+++ GPTHEE++T++ R+ Sbjct: 61 MDKIGAQEILMPIIQPAELWQRSGRWDDYGPEMMKLKDRHNRDFTLGPTHEELVTELIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP + YQI KFRDE+RPRFGV+R+REF+MKDAYSF + E +Y + Sbjct: 121 ELNSYKQLPVSLYQITTKFRDEIRPRFGVLRAREFIMKDAYSFHDSWESLDETYQLFKDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL+ + A +G IGG+ SHEF+ A+TGE+ V + E + Sbjct: 181 YSKIMERIGLRYSVIEAATGAIGGNESHEFVAFANTGESNVLYCDCG--YAGSDERVPYK 238 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY 289 + E+ N + + + E V R I +F Sbjct: 239 GDYEKDDEAEKTL----EKVYTPNVRTVEQVAEFLNVPIRKIVKSLVFK 283 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 64/189 (33%), Positives = 97/189 (51%), Gaps = 8/189 (4%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ ++ D P +GIE+GHIF GTKYS M + DGK MG Sbjct: 378 EWTDLVVVQIGDPCPVCGKPLKGEKGIELGHIFKLGTKYSDSMDVKYMDKDGKMKSFIMG 437 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YG G R + A++E HD GIIWP SVAP+++ ++ + + K+Y+ L Sbjct: 438 CYGWGISRTLGAIVEQLHDDDGIIWPRSVAPYEVDIVVVGKEKEKEFSE--KLYSYLLDK 495 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD G +F ADL+GFP+++ VG K + + KVEIK R +E + ++ + Sbjct: 496 GVDVIIDDRNVSPGVKFKDADLIGFPIRITVGRK-LKEGKVEIKERG---KEAILVDANM 551 Query: 436 NYASHRFSN 444 + + Sbjct: 552 EQILNAINE 560 >gi|158299584|ref|XP_319682.4| AGAP008929-PA [Anopheles gambiae str. PEST] gi|157013587|gb|EAA14818.5| AGAP008929-PA [Anopheles gambiae str. PEST] Length = 761 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 72/434 (16%), Positives = 148/434 (34%), Gaps = 42/434 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + IR E + G E+ Sbjct: 356 EEAAKRDHRKLGKEQELF--FFHELSPGSCFFQPKGAHIYNTLMGFIRSEYRKRGFQEVI 413 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + +A LW SG + Y + M + P + +F +S+R LP Sbjct: 414 SPNIYNAKLWQTSGHWQHYAENMFSFESEKET-FALKPMNCPGHCLMFDHRNRSWRELPL 472 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + + + ++ G Sbjct: 473 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCMPDQIREE-ITGCLDFLRHVYTIFG 531 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + P E + + D Sbjct: 532 FTFNLV-LSTRPEKYLGEIE-----------------VWNEAEKALADSLDKFGEPWKEN 573 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L N + + ++ F ++ + + G+ Sbjct: 574 PGDGAFYGPKIDI---TIMDALKRNHQCATIQLD----FQLPIRF----NLNYIDDSGEK 622 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + +G++ + A++ + WP ++P ++ ++ + D +++ Sbjct: 623 KRPVIIHRAVLGSVERMIAILT---ENYAGKWPFWLSPRQVMVVPVGP---AYDDYADQV 676 Query: 369 YARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 RL + G V D D G+ + + A L F ++VG K S V ++ R + Sbjct: 677 RQRLHEAGFMVEADLDAGDTMNKKIRNAQLAQFNFILVVGEKERSSETVNVRTRDNKVHG 736 Query: 428 DMSLEEVINYASHR 441 ++++ +++ S Sbjct: 737 EVTVNDLVTKLSKL 750 >gi|239932385|ref|ZP_04689338.1| threonyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672] Length = 653 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 73/439 (16%), Positives = 138/439 (31%), Gaps = 36/439 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD H+L L + + Q G+ + P G + R G + Sbjct: 249 EAEKRDHRKLGHELDLFS-IPEQIGSGLAVFHPKGGIVRRVMEDYSRRRHEEEGYEFVYT 307 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P L+ SG D Y M P + + IF + +SYR LP Sbjct: 308 PHATKGKLFETSGHLDWYADGMYPPMQLDEGVDYYLKPMNCPMHNLIFDARGRSYRELPL 367 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 ++ +R E G+ R+R F DA+ + + S+ +K L + G Sbjct: 368 RLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQMSEEL-DKTLTFVLNLLRDYG 426 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 L + + + + + + + + Sbjct: 427 LTDFYLELST----------------KDPEKFVGTDEAWEEATETLRQVAEKQGLPLVPD 470 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y + + D++ ++S ++ F ++ L +A K Sbjct: 471 PGGAAFYGPKI---SVQAKDAIGRTWQMSTIQLD----FNLPERFDLEYTAA---DGSKT 520 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + G++ AV+ + +P +AP + I I + EK Sbjct: 521 RPVMIHRALFGSIERFFAVLL---EHYAGAFPAWLAPVQAVGIPIG---DAHVEHLEKFA 574 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 A K G V D +++ + A P VI G + +++ V ++R + Sbjct: 575 AAARKQGLRVEVDSSSDRMQKKIRNAQKQKVPFMVIAGDEDMANGAVSFRYRDGSQENGI 634 Query: 430 SLEEVINYASHRFSNNRPV 448 ++E I V Sbjct: 635 PVDEAIAKIVKVVEERAQV 653 >gi|258652410|ref|YP_003201566.1| prolyl-tRNA synthetase [Nakamurella multipartita DSM 44233] gi|258555635|gb|ACV78577.1| prolyl-tRNA synthetase [Nakamurella multipartita DSM 44233] Length = 585 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 109/277 (39%), Positives = 149/277 (53%), Gaps = 2/277 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SH+L++R G I + + GIY+WLPLG + L NV I+REE Sbjct: 4 RLSTLFLRTLREDPADAEVPSHRLLVRAGYIRRAAPGIYTWLPLGYRVLRNVERIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ P L + + +GR+ YG + RL DR + GPTHEE+ T + + Sbjct: 64 DAIGAQEVHFPALLPREPYEATGRWTEYGDNLFRLQDRKQGDYLLGPTHEEMFTLLVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY+ LP + YQIQ K+RDE RPR G++R REF+MKD+YSFDL G SY + +Y Sbjct: 124 YSSYKGLPLSLYQIQTKYRDEARPRAGILRGREFVMKDSYSFDLDDAGLAASYQRHRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +RIF RLGL+ + + A SG +GG S EF+ GE S + + T Sbjct: 184 IRIFDRLGLRYVIVAAMSGAMGGSASEEFLADCVNGEDTYVRSPAGYAANVEAVTTPVPA 243 Query: 242 IISLNSIVEQ--WTAPYAATSDVHNEKLFDSLPENKR 276 I L P T D + P R Sbjct: 244 AIPLTDQPAAHVEDTPDTPTIDTLVAHSNAAHPRADR 280 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 69/188 (36%), Positives = 96/188 (51%), Gaps = 4/188 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ ARGIE+GHIF G KY+ + +GK V MG Sbjct: 399 GTVEAAEVREGDQSPDGSGPLTLARGIEMGHIFQLGRKYAQALGLQVLDENGKLVTVTMG 458 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R VAA+ ESS+D KG+IWP VAP + + I D E I A L Sbjct: 459 SYGIGVSRAVAAIAESSYDDKGLIWPREVAPADVH-VVIAGKSAEIVDTAELIAAGLDAA 517 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G V DD +G +FA A+L+G P +VG + V++ VE++ R +G + ++ L EV+ Sbjct: 518 GITVMLDDRNASVGVKFADAELIGVPTICVVG-RGVANGVVEVRDRASGDKTEVPLVEVV 576 Query: 436 NYASHRFS 443 R Sbjct: 577 EQLRARVR 584 >gi|256752497|ref|ZP_05493354.1| prolyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1] gi|256748632|gb|EEU61679.1| prolyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1] Length = 570 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 117/255 (45%), Positives = 163/255 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +AEI SH LML+ ++ + + G+Y +LPLGQ+ L V I+REE Sbjct: 1 MRLSQLLVPTLREIPAEAEIPSHILMLKAALMRKLASGVYIYLPLGQRVLRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ + L A+L ESGR+D +G EM +L DRN++ GPTHEEV TD+ R+ Sbjct: 61 MDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFKLKDRNERDFCLGPTHEEVFTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE RPRFGVMRSREF+MKDAYSFD+ EG S+NKM+ + Sbjct: 121 EVKSYRQLPLILYQIQTKFRDERRPRFGVMRSREFIMKDAYSFDVDWEGLDKSFNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK + + A+SG +GG S EF+V++ GE + + + F Sbjct: 181 YCRIFDRCGLKYLVVEADSGAMGGKDSKEFMVISSIGEAVIAYCDNCGYAANEEKAECFI 240 Query: 241 DIISLNSIVEQWTAP 255 + + ++ + Sbjct: 241 NQEIVEEMLPKEEVY 255 Score = 174 bits (441), Expect = 3e-41, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 101/190 (53%), Gaps = 3/190 (1%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P RGIEVGHIF GTKYS + A + +G + + MG Sbjct: 381 VVADIKNVIEGDKCPRCGSPLKIDRGIEVGHIFKLGTKYSDALGAKYVDEEGNEKPIIMG 440 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R VAA+IE HD KGIIWP SVAP+ + ++ + ++ E IYA L K Sbjct: 441 CYGIGINRTVAAIIEQHHDEKGIIWPMSVAPYHVIIVPVNVSNEAQNRVAEDIYAALQKE 500 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD + G +F ADLLG P+++ VG K V D VEIK R E++ + +V+ Sbjct: 501 GIEVLIDDRDLRAGVKFNDADLLGIPIRITVGKK-VDDGIVEIKLRENEEAEEVKISDVV 559 Query: 436 NYASHRFSNN 445 + Sbjct: 560 EKVKNIIKEK 569 >gi|313623934|gb|EFR94040.1| prolyl-tRNA synthetase [Listeria innocua FSL J1-023] Length = 568 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 120/271 (44%), Positives = 164/271 (60%), Gaps = 1/271 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + AI+REE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQVASGIYSYLPLATLTLRKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA EM +P LQ A+LW ESGR+ YG E++RL DR + + GPTHEE++T + R Sbjct: 61 LEAIGAAEMLMPALQPAELWHESGRWADYGPELMRLKDRAARDFVLGPTHEELITSLLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E ++ M + Sbjct: 121 EIKSYKRLPITLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDETFELMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D+ +E Sbjct: 181 YSNIFSRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYSD-ASDYAANTEMAPVL 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + + +E+ A + + + L Sbjct: 240 YMEKKSHELEKELEKVATENQKTIADIVEFL 270 Score = 164 bits (415), Expect = 3e-38, Method: Composition-based stats. Identities = 66/180 (36%), Positives = 101/180 (56%), Gaps = 3/180 (1%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ + D P+ + V GIEVGHIF GTKYS M+AT +G+ + MG YG Sbjct: 383 DLRMIQAGDLSPDGQGVIKFAEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R+++A+ E S+D G++W ++PF + LI + + E +Y L K G Sbjct: 443 IGLSRILSAIAEQSNDENGLVWDKQISPFDLHLIPVNMKSEEQVAFAESLYDSLQKAGFS 502 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G +FA ADL+G P+++ VG K ++ VE+K R TG ++ +E++N Sbjct: 503 VLIDDRTERAGVKFADADLIGLPIRITVGKK-AAEGIVEVKIRKTGEMIEVRQDELLNTL 561 >gi|218438508|ref|YP_002376837.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7424] gi|226699136|sp|B7K9K1|SYP_CYAP7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|218171236|gb|ACK69969.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7424] Length = 600 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 128/276 (46%), Positives = 165/276 (59%), Gaps = 7/276 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + GIY++LPL + L V+ I+R+E Sbjct: 1 MRLSQMLFVTLREDPAEAEIPSHKLLLRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N TGA E +P LQ ++LW ESGR+D+Y K M L DR ++ + GPTHEEV+T I Sbjct: 61 MNATGAQECLLPQLQPSELWKESGRWDTYTKAEGIMFALEDRQERELGLGPTHEEVITFI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD PEG K +Y M Sbjct: 121 AREMIRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFDTDPEGLKKTYQDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y I R GL + A+SG IGG S EF+VLAD GE +V + D + E Sbjct: 181 DKAYRNILRRCGLAFRAVDADSGAIGGSGSQEFMVLADAGEDEVLYTDDG-KYAANVEKA 239 Query: 238 ---DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 D+ S E+ P T + + L S Sbjct: 240 VSLPPDEEPSPFKNYEKRETPNTDTIEKLAQFLKCS 275 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 1/165 (0%) Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 SARGIEVGHIF GTKYS M AT+ G++ + MG YGIG R+ + +E S+D Sbjct: 431 LQSARGIEVGHIFQLGTKYSHAMGATYTNEQGEEMPLVMGCYGIGVSRLAQSAVEQSYDK 490 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 GIIWP ++AP+ ++ +D + EK+Y L+ G + DD E+ G +F + Sbjct: 491 DGIIWPVAIAPYHAIVVIPNINDPQQVEVAEKLYTELNAAGIETLLDDRDERAGVKFKDS 550 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 +L+G P +++ G + + + K+E+ R T +D+ ++EV++ Sbjct: 551 ELVGIPYRIVTG-RSLKEGKLEVVERATKKSQDIPIDEVVSTIQQ 594 >gi|311739686|ref|ZP_07713521.1| proline--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035] gi|311305502|gb|EFQ81570.1| proline--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035] Length = 589 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 115/387 (29%), Positives = 170/387 (43%), Gaps = 22/387 (5%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+E+P DAE+ SHKL++R G + + + G+Y+WLPLG + L + ++R+E Sbjct: 4 RLSELFLRTLREDPADAEVPSHKLLVRAGYVRRVAPGVYTWLPLGLRTLRKIEDVVRQEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G EM P L + + ++ R+ YG + RL DR + M+ GPTHEE+ + Sbjct: 64 DAIGGQEMLFPALLPREPYEKTNRWVEYGDNLFRLKDRKNADMLLGPTHEEMFASAVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR GV+R REF MKD+YSFD+T EG SY + +Y Sbjct: 124 YSSYKDFPVTLYQIQTKYRDEERPRAGVLRGREFTMKDSYSFDMTDEGLDESYGRHRKAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 IF+RL + +A SG +GG S EF+ +++ GE F D+ E Sbjct: 184 QNIFNRLEIDYAICKATSGAMGGSASEEFLAVSEVGE-DTFVRSTEGDYAANVEAVVTPA 242 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + P A D + + L E + + ++ AT Sbjct: 243 PAEKDI----EGQPEAQEHDTPGAETIEKLVEWAQGAGITVDG-------------REAT 285 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVA-AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 R A + D + A + D Sbjct: 286 AADTLKCMMVKLFHPAVESEERESELAAVLIPGDRELDEKRLEAALEPVEFELAGDKDFA 345 Query: 361 CRDACEKIY---ARLSKVGCDVFWDDM 384 D K Y L+ G V D Sbjct: 346 DNDFLVKGYVGPRALNANGIKVLADPR 372 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 6/189 (3%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 + K D PEN RGIE+GHIF G KY+ +GK MG Sbjct: 403 EFIEAAEVKEGDLAPENHGTLTLERGIELGHIFQLGRKYTEAFDVQILDENGKRAVPTMG 462 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R++A + E HD KG+ WP +VAP+++ + D +A +K+ LS Sbjct: 463 SYGIGITRMLAVLAEQRHDDKGLNWPVAVAPYQVHVAVAN-KDAAAMEAGDKLVEELSAK 521 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD G +F A+LLG P I+G + + K+E++ R G ++ E++ Sbjct: 522 GLEVLFDDRPKVSPGVKFKDAELLGMPFVAILG-RAFKEGKIELRIRG-GETLEVPAEDI 579 Query: 435 INYASHRFS 443 ++ Sbjct: 580 VDKILELVR 588 >gi|153870648|ref|ZP_02000004.1| threonyl-tRNA synthetase, class IIa [Beggiatoa sp. PS] gi|152072888|gb|EDN69998.1| threonyl-tRNA synthetase, class IIa [Beggiatoa sp. PS] Length = 390 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 78/426 (18%), Positives = 148/426 (34%), Gaps = 40/426 (9%) Query: 22 SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 +L L + + + G+ W G + + IR + E+ P L LW Sbjct: 2 GKQLDLF--HVQEEAPGMVFWHDKGWQIYIIIQNYIRHLLRQHHYQEVHTPQLVDRSLWE 59 Query: 82 ESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRD 141 +SG +D +G +M + ++ P + IF +KSYR+LP + R+ Sbjct: 60 KSGHWDKFGDDMF-VTQSENREYAVKPMNCPCHIQIFNQGLKSYRDLPLRLAEFGSCHRN 118 Query: 142 ELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESG 200 E G+MR R F+ DA+ F + + + +++ G K+I ++ + Sbjct: 119 EASGTLHGLMRIRGFVQDDAHIFCTDDQIQQE-VSDFIDLLFKVYTDFGFKNILIKLSTR 177 Query: 201 PIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS 260 P S E D + ++ + A Y Sbjct: 178 PEKRVGSDE-----------------VWDKAEKALELALNNKKLAWDLQPGEGAFYGPKI 220 Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH-YVQMGSYGI 319 + L D L + ++ G AT+ ADG V + + Sbjct: 221 EF---VLKDCLDRVWQCGTIQVDFSMPDRLG--------ATYIAADGSKQVPVMLHRAIL 269 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G++ V+ + G +W V +++ D ++I +L K G V Sbjct: 270 GSLERFIGVLIEEYAGALPLWLAPVQVVILNIT------DEHADYAKQIEVKLLKEGFRV 323 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 D E+IG + L P +I+G + + +V ++ R + M ++ I Sbjct: 324 ESDLRNEKIGFKIREHTLQKIPYLLIIGGREIETQQVTVRLRNGEDKGAMLIDTFIEQLR 383 Query: 440 HRFSNN 445 ++ Sbjct: 384 SEIASY 389 >gi|71033673|ref|XP_766478.1| threonyl-tRNA synthetase [Theileria parva strain Muguga] gi|68353435|gb|EAN34195.1| threonyl-tRNA synthetase, putative [Theileria parva] Length = 779 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 86/441 (19%), Positives = 153/441 (34%), Gaps = 35/441 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQH-SKGIYSWLPLGQKALDNVNAIIREEQN 62 K + ++E RD L L S G WLP G K + + +R+ Sbjct: 365 KMYKHRIEEAKQRDHRTIGTDLKLF--YFDTVHSPGSCFWLPNGAKIYNRLVEFMRDNYR 422 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P + S DLW +SG YD+Y + M L + D P + +F+ Sbjct: 423 IRGYQEVITPNIFSCDLWKQSGHYDNYKENM-YLFNLEDTEWGMKPMNCPGHCLMFKHLF 481 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY+ LP + R+EL G+ R R F DA+ F + + Sbjct: 482 LSYKQLPLRLADFGVLHRNELTGSLSGLTRVRRFQQDDAHIFCTREQIMEE--------V 533 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L I +G D +EF T + + + S + Sbjct: 534 LNILTFIGKVYSLF---------DFRYEF--KLSTKPAKALGDNELWEVAEKSLEEALNK 582 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + A Y DV LFD L + ++ F +Y ++ Sbjct: 583 TGAKWILNPGDGAFYGPKIDV---VLFDCLDREHQCGTIQLDFNLPIRFNLEYRDKSESS 639 Query: 302 FKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G + V + G++ A++ + P ++P ++ I I Sbjct: 640 AENVRCGFNRPVIIHRAIFGSIERFVAIVL---EQTKGKLPFWLSPNQLLFIPITDSH-- 694 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++Y + + +G +V D I + + IVG + V V ++ Sbjct: 695 -LDYALELYEKFNALGYNVDVDRSNNTINKKIKFGQQQRWNYMGIVGDREVETRTVSLRP 753 Query: 421 RLTGIREDMSLEEVINYASHR 441 R + + +SL+E++ + Sbjct: 754 RDSDEQNVVSLDELVKLFESQ 774 >gi|332664427|ref|YP_004447215.1| threonyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100] gi|332333241|gb|AEE50342.1| threonyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100] Length = 645 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 153/443 (34%), Gaps = 39/443 (8%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L + G+ WLP G D + +R EQ + G Sbjct: 233 LVMLEEARKRDHRKLGQELELFM-FSERVGAGLPIWLPKGNALRDRLMNFLRVEQEKRGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 ++ P + +L+V SG Y YGK+ + ++ + + P + +I+ S Sbjct: 292 KLVTTPHIGRKELYVTSGHYAKYGKDSFQPIHTPKDGEEFLLKPMNCPHHCEIYAHRPHS 351 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + +R E G+ R R F DA+ F + + + Sbjct: 352 YRDLPMRIAEFGTVYRYEQTGELHGLSRVRGFTQDDAHIFCTEEQVKGE-FLNVLDLTRT 410 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + +++G K + + S + + ++ Sbjct: 411 VLYKMGFKEFTAQISLRDPNT-------------PEKYLGSDENWRNAENAIIEATREVG 457 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 ++ A Y D + D++ ++ ++ + Sbjct: 458 LKTTMELGEAAFYGPKLDFM---VRDAIGRQWQLGTIQVDYNLP--------ERFELEYV 506 Query: 304 GADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 GAD K H M R ++ +IE++ + + Sbjct: 507 GADNKTHRPVMIHRAPFGSMERFISILIENTAGKFPLWLMPEQYALLPI-------SEKF 559 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D C++I +L+ + DD E IG + +L P +IVG K + + V ++ + Sbjct: 560 VDYCKEIEEKLATHDIRGYVDDRNETIGRKIRDTELKRIPYMLIVGEKEMEATGVAVRRQ 619 Query: 422 LTGIREDMSLEEVINYASHRFSN 444 G + MSLE ++ + Sbjct: 620 GEGDKGSMSLEAFVSLFGEALAK 642 >gi|323359943|ref|YP_004226339.1| threonyl-tRNA synthetase [Microbacterium testaceum StLB037] gi|323276314|dbj|BAJ76459.1| threonyl-tRNA synthetase [Microbacterium testaceum StLB037] Length = 666 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 68/456 (14%), Positives = 134/456 (29%), Gaps = 48/456 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + + L+E RD +L L + + G+ + P G + +RE Sbjct: 234 RAYQHRLEEAAKRDHRKLGKELDLFS-FPDEIGPGLSVFHPKGGIIRYEIERYMRERLLA 292 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHE 111 +G ++ P + DL++ SG Y M R + P + Sbjct: 293 SGYEVVNTPHITKGDLFMTSGHLQWYADGMYPPMVLDEVVDADGHVSREGQEYYLKPMNC 352 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 IFRS +SYR LP + +R E G+ R R D + + + Sbjct: 353 PFHNLIFRSRGRSYRELPLRLSEFGSVYRYEKSGTLSGLTRVRGMTQDDTHIYVTADQVK 412 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 L+ GL + + + G + Sbjct: 413 GEL-THSLDFVLQTLRDYGLNDFYLELSTK--------------EEGNPKFIGDDSLWVE 457 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + A Y + + D++ ++S ++ Sbjct: 458 ATETLREVAEASGLELVPDPGGAAFYGPKI---SVQARDAIGRTWQMSTIQLDFNQP--- 511 Query: 291 GTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 + G DG+ H + G++ A++ + G +W V + Sbjct: 512 -----ERFELEYTGPDGEKHRPVMIHRALFGSVERFFAILLEHYAGAFPVWLSPVQVVAV 566 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 + D + I A L G D +++ + PL +I G + Sbjct: 567 PVAA------EYGDYLQGIVADLKSKGVRAEADHSDDRMQKKIRTHTTQKVPLMLIAGEQ 620 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 S+ V + R + ++E + + S+ Sbjct: 621 DRSNGTVSFRFRDGTQLNGIPVDEAVARITGAISSR 656 >gi|307700804|ref|ZP_07637829.1| threonine--tRNA ligase [Mobiluncus mulieris FB024-16] gi|307613799|gb|EFN93043.1| threonine--tRNA ligase [Mobiluncus mulieris FB024-16] Length = 669 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 65/456 (14%), Positives = 138/456 (30%), Gaps = 48/456 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K ++ L+E RD +L L + + G+ + P G + R+ Sbjct: 246 KAYVTRLEEAEKRDHRRLGTELDLFS-FPEEIGSGLPVFHPKGALVRMEMENYSRQRHLE 304 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHE 111 G +S P + L+ SG Y + M + P + Sbjct: 305 EGYSFVSTPHVTKGQLFETSGHLSWYKEGMFPAMHLDEERDAQGNVTKEGADYYLKPMNC 364 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF+S +SYR LP ++ +R E G+ R+R F D++ + + Sbjct: 365 PMHNLIFKSRTRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDSHIYCTRDQMK 424 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L + GL + + + S + + Sbjct: 425 DELTK-LLTFVLDLLKDYGLDDFYLELST----------------KNPQKFVGSDEVWEE 467 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + + A Y + + D++ ++S ++ F Sbjct: 468 ATRTLQEVAEASGLELRPDPEGAAFYGPKI---SVQARDAIGRTWQMSTIQLD----FNL 520 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 ++ L +A + V + G++ V+ + G W Sbjct: 521 PERFELEYTAA---DGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAW------LAPV 571 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 + + CE + +L V D+ ++ G + A P +IVG + Sbjct: 572 QVRLVPVADTFNAYCEDVAKQLRAENVRVEIDESDDRFGKKIRNAAKDKIPFTLIVGGED 631 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 V ++R + + + I + + + Sbjct: 632 AEHGAVSFRYRGGEQKNGVKISAAIQEITETIRSRK 667 >gi|302379784|ref|ZP_07268268.1| proline--tRNA ligase [Finegoldia magna ACS-171-V-Col3] gi|302312372|gb|EFK94369.1| proline--tRNA ligase [Finegoldia magna ACS-171-V-Col3] Length = 576 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 115/240 (47%), Positives = 161/240 (67%), Gaps = 1/240 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K+++P L+E+P+DAEIASHKL+LR GMI + + G+YS+LPLG + + V I+REE Sbjct: 1 MRMNKFYMPTLREDPQDAEIASHKLLLRAGMIRKTAAGLYSYLPLGYRIVRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G+ E+ +P Q ++W ESGR+ ++G EM +L DRN++ GPT EE TD+ + Sbjct: 61 MDNYGSQEIHMPITQPREIWEESGRWKTFGPEMFKLKDRNNREFCLGPTAEEYFTDLVKG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFG+ RSREFLM+DAY+FD+ E +Y M+ + Sbjct: 121 EIKSYKQLPLNIYQIQTKYRDEKRPRFGINRSREFLMQDAYTFDVDEEAMGEAYMNMWRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F+RLGL+ + +SG +GG+ SHEFI L+D GE V C D DF E Sbjct: 181 YEVVFNRLGLEYKIVAGDSGAMGGNSSHEFIALSDVGEG-VICYSDDSDFAATDEKAYVY 239 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 102/199 (51%), Gaps = 1/199 (0%) Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 + + + + E D ++ RGIEVG+IF G KYS M+ATF + Sbjct: 370 NYGDDFEGEIVEDLLMVQEGDIDPETKSPLKFKRGIEVGNIFQLGQKYSKSMNATFLDEN 429 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 GK+ + MGSYGIG R V+A++E +HD KG+IWP VAP+ + + + D+ E Sbjct: 430 GKEQFFWMGSYGIGVTRSVSAIVEQNHDDKGMIWPLVVAPYHVIITIVNTKDEEQNTLAE 489 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+Y +L G +V DD E+ G +F DL+G PL++ VG K + VE R T Sbjct: 490 KLYEKLLLQGVEVLLDDRKERAGVKFNDRDLIGIPLRITVGKKAAEE-IVEFSERRTLEN 548 Query: 427 EDMSLEEVINYASHRFSNN 445 +MS E + + N Sbjct: 549 VEMSSTEAYDKVMEIINAN 567 >gi|81301415|ref|YP_401623.1| threonyl-tRNA synthetase [Synechococcus elongatus PCC 7942] gi|123769177|sp|Q31JY3|SYT_SYNE7 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|81170296|gb|ABB58636.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Synechococcus elongatus PCC 7942] Length = 604 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 73/455 (16%), Positives = 145/455 (31%), Gaps = 41/455 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + RD +L L G+ W P G + +++EQ Sbjct: 183 LTEYKRRKEEALKRDHRKLGRELGLFL-FADPVGPGLPLWTPKGTILRSTLEDFLKQEQM 241 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA------MIYGPTHEEVMTD 116 + G + P L DL+ SG + +Y ++M + +D+A + P + Sbjct: 242 KRGYQSVVTPHLARVDLFKVSGHWQNYREDMFPMMAEDDEARGLEQGFVLKPMNCPFHIQ 301 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 I+++ ++SYR LP + +R E G + D + P+ + Sbjct: 302 IYKNELRSYRELPIRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVRPDQLASEFLS 361 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + L +F L LK R D + S D + + Sbjct: 362 VVDLILSVFKALNLKKFKARLS--------------FRDPESDKYIGSDDVWEKAESAIQ 407 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + + I A Y D D+L ++ ++ Sbjct: 408 AAAETLGMDYFIGVGEAAFYGPKLDFI---FQDALDREWQLGTVQVDYNLP--------E 456 Query: 297 PMSATFKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + DG M R++ +IE + Sbjct: 457 RFDLEYVAEDGSRQRPVMIHRAPFGSLERLIGILIEEYAGDFPLWLAPEQIRLLPVT--- 513 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 + D C+++ +L +G V D G+++G A+ P+ ++G++ Sbjct: 514 ----ETVLDYCQQVADQLRAIGVRVQVDCSGDRLGKLIRNAEKAKIPVMAVIGAQEAESE 569 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 + I+ R TG +++ ++ S + P L Sbjct: 570 TLSIRTRATGDLGSLTVADLTKRLSSAIAEKLPHL 604 >gi|148269548|ref|YP_001244008.1| prolyl-tRNA synthetase [Thermotoga petrophila RKU-1] gi|166980169|sp|A5IJQ9|SYP_THEP1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|147735092|gb|ABQ46432.1| prolyl-tRNA synthetase [Thermotoga petrophila RKU-1] Length = 577 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 110/251 (43%), Positives = 163/251 (64%), Gaps = 1/251 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + P L+E P D E SH+ +LR G I + + GIY++LPLG++ L + I+REE Sbjct: 1 MRMKDLYAPTLKETPSDVETVSHEYLLRGGFIRKVAAGIYTYLPLGRRVLLKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P LQ A+LW +SGR+D YG EM++L DR+++ GPTHEE++TD+ ++ Sbjct: 61 MNRIGAQEILMPILQPAELWKQSGRWDDYGPEMMKLKDRHERDFTLGPTHEEIVTDLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP T YQI K+RDE+RPRFG++R+REF+MKDAYSF + E +Y + + Sbjct: 121 ELRSYKQLPLTLYQIANKYRDEIRPRFGLLRAREFIMKDAYSFHASWESLDETYEEFKKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RI RLG++ + + AE+G IGG+ SHEF+V A GET V + + E ++ Sbjct: 181 YSRIMERLGVRYMIIEAETGAIGGNASHEFVVPAKIGETNVLFCEKC-GYQASDEKAEYR 239 Query: 241 DIISLNSIVEQ 251 + E+ Sbjct: 240 GEYTQEQEKEK 250 Score = 146 bits (369), Expect = 6e-33, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 98/196 (50%), Gaps = 7/196 (3%) Query: 258 ATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 D+ D P + +GIE+GHIF GTKYS M A F +G+ MG Sbjct: 378 EWYDLRTMVEGDPCPVCGEPLKATKGIELGHIFKLGTKYSEAMKAYFMDENGEMKPFIMG 437 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YG G R +AAV+E HD G+IWP S+AP+ + + + +D + EKIY LS+ Sbjct: 438 CYGWGVSRTMAAVVEHFHDENGMIWPLSIAPYTVVVDILNMNDAEQKQVGEKIYQVLSEK 497 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE-- 433 G +V DD G +F ADL+GFP+++ VG + + + VE+K R + ++++ Sbjct: 498 GEEVVLDDREVSPGFKFKDADLIGFPIRINVG-RSLKEGVVELKKRYSKELVKVNIKNGF 556 Query: 434 --VINYASHRFSNNRP 447 ++ P Sbjct: 557 GTLLETLEKMKREYDP 572 >gi|167039496|ref|YP_001662481.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X514] gi|300915254|ref|ZP_07132569.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X561] gi|307725178|ref|YP_003904929.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X513] gi|226701350|sp|B0K5F2|SYP_THEPX RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|166853736|gb|ABY92145.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X514] gi|300888978|gb|EFK84125.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X561] gi|307582239|gb|ADN55638.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X513] Length = 570 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 116/255 (45%), Positives = 162/255 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +AEI SH LML+ ++ + + G+Y +LPLGQ+ L V I+REE Sbjct: 1 MRLSQLLVPTLREIPAEAEIPSHILMLKAALMRKLASGVYIYLPLGQRVLRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ + L A+L ESGR+D +G EM +L DRN++ GPTHEEV TD+ R+ Sbjct: 61 MDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFKLKDRNERDFCLGPTHEEVFTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE RPRFGVMRSREF+MKDAYSFD+ EG S+NKM+ + Sbjct: 121 EVKSYRQLPLILYQIQTKFRDERRPRFGVMRSREFIMKDAYSFDVDWEGLDKSFNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK + + A+SG +GG S EF+V++ GE + + + Sbjct: 181 YCRIFDRCGLKYLVVEADSGAMGGKDSKEFMVISSIGEAVIAYCDNCGYAANEEKAECLI 240 Query: 241 DIISLNSIVEQWTAP 255 + + ++ + Sbjct: 241 NQEIVEEMLPKEEVY 255 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 101/190 (53%), Gaps = 3/190 (1%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P RGIEVGHIF GTKYS + A + +G + + MG Sbjct: 381 VVADIKNVIEGDKCPRCGSPLKIDRGIEVGHIFKLGTKYSDALGAKYVDEEGNEKPIIMG 440 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R VAA+IE HD KGIIWP SVAP+ + ++ + ++ E IYA L K Sbjct: 441 CYGIGINRTVAAIIEQHHDEKGIIWPMSVAPYHVIIVPVNVSNEAQNRVAEDIYAALQKE 500 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD + G +F ADLLG P+++ VG K V D VEIK R E++ + +V+ Sbjct: 501 GIEVLIDDRDLRAGVKFNDADLLGIPIRITVGKK-VDDGIVEIKLRENEEAEEVKISDVV 559 Query: 436 NYASHRFSNN 445 + Sbjct: 560 EKVKNIIKEK 569 >gi|313896347|ref|ZP_07829900.1| proline--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430] gi|312975146|gb|EFR40608.1| proline--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430] Length = 570 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 119/285 (41%), Positives = 170/285 (59%), Gaps = 2/285 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + + P L+ P +AEIASH+LM R G+I + + G+Y++LPL + L + IIREE Sbjct: 1 MRATNLYAPTLRNTPAEAEIASHRLMYRAGLIRKSAGGMYTYLPLAWRTLRKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P LQ A+LW ESGR+ +YG EM+R+ DR+++A GPTHEE++T + R Sbjct: 61 MDAAGGQEIMMPILQPAELWEESGRWGAYGAEMMRIQDRHERAFCLGPTHEEMITALVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ KFRDE RPRFGVMRSREF+M+D YSFD EG SY KM+ + Sbjct: 121 ELRSYKQLPVMLYQIQDKFRDERRPRFGVMRSREFIMQDLYSFDKDVEGMHESYRKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP--IPSENTD 238 Y +F R GL + A+ G IGG S EF VLA GE+++ C ++ Sbjct: 181 YTNVFTRCGLNFRAVEADCGAIGGGRSEEFTVLAPEGESRIACCDACSYAASDEKAQLRP 240 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 D +E+ + P+ +T + E L + + + A E Sbjct: 241 LDAPDEAELPLEKVSTPHTSTIALLAEFLKIPVEKTIKAVAYQTE 285 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 70/218 (32%), Positives = 107/218 (49%) Query: 226 DFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 M + N ++N + + A V L + E +RGIE G Sbjct: 351 MRMKNAVSGANEQDYHYTNVNPVRDFAHVTVADIRLVAEGDLCPACGEGHLHISRGIEAG 410 Query: 286 HIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 IF GTKYS M A F DGK +QMG YGIG R +AA IE +HD GIIWP ++A Sbjct: 411 QIFALGTKYSEAMQANFLDVDGKLKPLQMGCYGIGVGRTMAAAIEQNHDEHGIIWPRAIA 470 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405 P+++ ++ + A + E+IY L G DV DD E+ G +F DL+G+P+++ Sbjct: 471 PYEVVVVAVNAKVEEQLAYAEEIYEELRAAGIDVLLDDRRERAGVKFNDCDLIGYPVRIA 530 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 +G K + + +E+K R TG + + + + + Sbjct: 531 IGPKTIENGSIEVKLRRTGELVNFARDTYLKGVRDMLA 568 >gi|297587908|ref|ZP_06946552.1| proline--tRNA ligase [Finegoldia magna ATCC 53516] gi|297574597|gb|EFH93317.1| proline--tRNA ligase [Finegoldia magna ATCC 53516] Length = 576 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 114/240 (47%), Positives = 162/240 (67%), Gaps = 1/240 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K+++P L+E+P+DAEIASHKL+LR GMI + + G+YS+LPLG + + V I+REE Sbjct: 1 MRMNKFYMPTLREDPQDAEIASHKLLLRAGMIRKTAAGLYSYLPLGYRIVRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G+ E+ +P Q ++W ESGR+ ++G EM +L DRN++ GPT EE TD+ + Sbjct: 61 MDNYGSQEIHMPVTQPREIWEESGRWKTFGPEMFKLQDRNNREFCLGPTAEEYFTDLVKG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFG+ RSREFLM+D+Y+FD+ E + +Y M+ + Sbjct: 121 EIKSYKQLPLNIYQIQTKYRDEKRPRFGINRSREFLMEDSYTFDVDEEAMREAYMNMWRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F+RLGL+ + +SG +GG+ SHEFI L+D GE V C D DF E Sbjct: 181 YEVVFNRLGLEYKIVAGDSGAMGGNSSHEFIALSDVGEG-VICYSDDSDFAATDEKAYVY 239 Score = 149 bits (376), Expect = 9e-34, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 102/199 (51%), Gaps = 1/199 (0%) Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 + + + + E D ++ RGIEVG+IF G KYS M+ATF + Sbjct: 370 NYGDDFEGEIVEDLLMVQEGDIDPETKSPLKFKRGIEVGNIFQLGQKYSKSMNATFLDEN 429 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 GK+ + MGSYGIG R V+A++E +HD KG+IWP VAP+ + + + + E Sbjct: 430 GKEQFFWMGSYGIGVTRSVSAIVEQNHDDKGMIWPLVVAPYHVIITIVNTKNDEQNTLAE 489 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+Y +L G +V DD E++G +F DL+G PL++ VG K + VE R T Sbjct: 490 KLYEKLLLQGVEVLLDDRKERVGVKFNDRDLIGIPLRITVGKK-ADEDIVEFSERKTLEN 548 Query: 427 EDMSLEEVINYASHRFSNN 445 +MS +E + N Sbjct: 549 VEMSSQEAYEKVMEIINAN 567 >gi|169344114|ref|ZP_02865097.1| prolyl-tRNA synthetase [Clostridium perfringens C str. JGS1495] gi|169297725|gb|EDS79824.1| prolyl-tRNA synthetase [Clostridium perfringens C str. JGS1495] Length = 570 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 130/293 (44%), Positives = 170/293 (58%), Gaps = 6/293 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+E P +AEI SHKLMLR G++ + + GIY+++PLG K ++NV I+REE Sbjct: 1 MKMSNMLVGTLREVPAEAEIESHKLMLRAGLMRKMAAGIYNYMPLGLKVIENVKNIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E P L A+LW ESGR+D+YG EM RL DR+++ GPTHEEV TDI R+ Sbjct: 61 MNNAGAQEFLAPALIPAELWQESGRWDAYGAEMFRLKDRHNRDFCLGPTHEEVFTDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFGVMRSREF+MKD YSFD EG +Y KM + Sbjct: 121 EIKSYKQLPLNLYQIQTKYRDERRPRFGVMRSREFIMKDGYSFDKDQEGLDLAYEKMRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ IF+R GL + + A+SG IGG S EF+V ++ GE V D+ E Sbjct: 181 YVNIFNRCGLDAKTVAADSGAIGGSGSAEFMVKSEVGEDDVVFCTAC-DYAANIEKAP-- 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 S E+ + K + L + S + I IF K Sbjct: 238 ---STPEHGEKEELMEVEKVETPVVKSIEDLAKFFECSPKKIAKTLIFQADDK 287 Score = 166 bits (421), Expect = 6e-39, Method: Composition-based stats. Identities = 75/191 (39%), Positives = 103/191 (53%), Gaps = 3/191 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 D N + + PE + +RG EVGHIF GTKYS M ATF DGK Sbjct: 375 FEGIVGDFRNVTIGEKCPECGKEITISRGTEVGHIFKLGTKYSESMGATFIDEDGKAKPF 434 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R VA++IE +D GIIWP VAP+ +S+I ++ E+IY L Sbjct: 435 IMGCYGIGVTRTVASIIEQHNDENGIIWPLEVAPYHVSVIPANVKNEEQATKAEEIYNEL 494 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 K+G + DD E+ G +F ++L+G P+++ VG K + + +VE K R G E +S+E Sbjct: 495 RKMGVEALLDDRKERAGVKFKDSELMGIPMRITVG-KMIGEGQVEFKLRNGGEVETLSIE 553 Query: 433 EVINYASHRFS 443 EV N F Sbjct: 554 EVYNRVREEFE 564 >gi|56751513|ref|YP_172214.1| threonyl-tRNA synthetase [Synechococcus elongatus PCC 6301] gi|73919835|sp|Q5N1X6|SYT_SYNP6 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56686472|dbj|BAD79694.1| threonyl-tRNA synthetase [Synechococcus elongatus PCC 6301] Length = 607 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 73/455 (16%), Positives = 145/455 (31%), Gaps = 41/455 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + RD +L L G+ W P G + +++EQ Sbjct: 186 LTEYKRRKEEALKRDHRKLGRELGLFL-FADPVGPGLPLWTPKGTILRSTLEDFLKQEQM 244 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA------MIYGPTHEEVMTD 116 + G + P L DL+ SG + +Y ++M + +D+A + P + Sbjct: 245 KRGYQSVVTPHLARVDLFKVSGHWQNYREDMFPMMAEDDEARGLEQGFVLKPMNCPFHIQ 304 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 I+++ ++SYR LP + +R E G + D + P+ + Sbjct: 305 IYKNELRSYRELPIRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVRPDQLASEFLS 364 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + L +F L LK R D + S D + + Sbjct: 365 VVDLILSVFKALNLKKFKARLS--------------FRDPESDKYIGSDDVWEKAESAIQ 410 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + + I A Y D D+L ++ ++ Sbjct: 411 AAAETLGMDYFIGVGEAAFYGPKLDFI---FQDALDREWQLGTVQVDYNLP--------E 459 Query: 297 PMSATFKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + DG M R++ +IE + Sbjct: 460 RFDLEYVAEDGSRQRPVMIHRAPFGSLERLIGILIEEYAGDFPLWLAPEQIRLLPVT--- 516 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 + D C+++ +L +G V D G+++G A+ P+ ++G++ Sbjct: 517 ----ETVLDYCQQVADQLRAIGVRVQVDCSGDRLGKLIRNAEKAKIPVMAVIGAQEAESE 572 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 + I+ R TG +++ ++ S + P L Sbjct: 573 TLSIRTRATGDLGSLTVADLTKRLSSAIAEKLPHL 607 >gi|313609001|gb|EFR84741.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL F2-208] Length = 344 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 120/271 (44%), Positives = 162/271 (59%), Gaps = 1/271 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E YN M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL+ + A+SG IGG+ S EF+ L++ GE + S D+ +E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSEIGEDTIAYSD-ASDYAANTEMAPVL 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + + +E+ A + + L Sbjct: 240 YMEKKSHELEKELKKVATPDQKSIADIVEFL 270 >gi|294508832|ref|YP_003572891.1| threonyl-tRNA synthetase, class IIa [Salinibacter ruber M8] gi|294345161|emb|CBH25939.1| threonyl-tRNA synthetase, class IIa [Salinibacter ruber M8] Length = 656 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 74/441 (16%), Positives = 142/441 (32%), Gaps = 41/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + + RD +L L T Q G+ WLP G + ++++EQ + G Sbjct: 238 FLERRRKAKERDHRKLGTELNLFTFDTEQVGPGLPMWLPKGTTLRQTLQEVLQQEQVKQG 297 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------DRNDKAMIYGPTHEEVMTDIFR 119 + P + DL+ SG Y Y + D + + P + I++ Sbjct: 298 YKPVCTPHIGRLDLYRTSGHYPHYEDDQFPPMVTGEGDDGEEDGYLLKPMNCPHHVKIYQ 357 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + SYR+LP + +R E G+ R R F DA+ F TP K + + Sbjct: 358 NDHHSYRDLPVRLAEFGTVYRQEQTGELGGLTRVRGFTQDDAHIFC-TPAQVKDEFKSVI 416 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPSENT 237 L++ LG + + D +T+ + Sbjct: 417 DLTLKVLDALGFEEFEAQISLR--------------DPDDTEKYTGRDALWTRAEQDIRE 462 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + A Y D E D+L ++ ++ Sbjct: 463 AVAETDLDAYEEPGEAAFYGPKLDFMVE---DALGRAWQLGTIQVDYNLP--------ER 511 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 T+ + + G++ V+ G W +AP ++ +I + Sbjct: 512 FELTYVDEHDERKRPVMIHRAPFGSLERFIGVLIEHCGGNFPTW---LAPTQVQIIPVG- 567 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D +++ A L V D E +G + A+ P ++VG V Sbjct: 568 --DDFVDYAQEVAATLRAEDVRVEIDTSDETVGYKIREAETQKVPYMLVVGGDEEEAGTV 625 Query: 417 EIKHRLTGIREDMSLEEVINY 437 ++ G + +S+++ ++ Sbjct: 626 SVRSHADGPQGTVSVQDFLDR 646 >gi|325912604|ref|ZP_08174987.1| threonine--tRNA ligase [Lactobacillus iners UPII 60-B] gi|325478025|gb|EGC81154.1| threonine--tRNA ligase [Lactobacillus iners UPII 60-B] Length = 643 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 73/434 (16%), Positives = 154/434 (35%), Gaps = 36/434 (8%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L L + + G+ W+P G + I +++ G + P L Sbjct: 238 RDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRVIERYIIDKEVADGYQHVYTPVL 295 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y ++M D D M P + I+ HI+SYR LP Sbjct: 296 MNLDAYKTSGHWAHYREDMFPPMDMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIA 355 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + K+ + ++ + Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVELDQVQSE-FAKILKLIMEVYRDFDITD 414 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + F + + + DD+ E Sbjct: 415 YYFRLS-------------YRDPKNTDKYFANDEMWERSQKMLKGAMDDLGLEYVEAEGE 461 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ + ++ G DG++H Sbjct: 462 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----NLSYVGKDGEEHRP 510 Query: 313 -QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + +G M A + + G W + + I ++ + + + + Sbjct: 511 VMVHRGIVGTMERFIAYLTEIYKGAFPTWLA-----PLQVKIIPVNNDAHGEYAQNVKDQ 565 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L K+G D E++G + A P +++G + + V ++ + +E +L Sbjct: 566 LMKLGFRSEVDFRNEKLGYKIREAQTQKVPYTLVLGDDELQHNSVNVRKYGSEDQESKAL 625 Query: 432 EEVINYASHRFSNN 445 E ++ S ++ Sbjct: 626 SEFVSELSADVASY 639 >gi|323489584|ref|ZP_08094811.1| prolyl-tRNA synthetase 1 [Planococcus donghaensis MPA1U2] gi|323396715|gb|EGA89534.1| prolyl-tRNA synthetase 1 [Planococcus donghaensis MPA1U2] Length = 567 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 126/362 (34%), Positives = 184/362 (50%), Gaps = 3/362 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+++ F+P L+E P DAE+ SH+L+LR G I Q++ GIYS+LPLG++ L V +IREE Sbjct: 1 MKQTATFIPTLRETPADAEVRSHQLLLRAGFIRQNTSGIYSFLPLGKRVLQKVETVIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++E+ +P LQ A+LW ESGR+ SYG E++RL DRND+ G THEEV+T + R Sbjct: 61 MEAANSVEIFMPALQQAELWQESGRWYSYGDELMRLKDRNDREFALGATHEEVITSLLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP +QIQ KFRDE RPRFG++R REFLMKDAYSF T E +Y+ M + Sbjct: 121 EIKSYKKLPLNLFQIQSKFRDEKRPRFGLLRGREFLMKDAYSFHATTESLDETYDVMMQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK---DFMDFPIPSENT 237 Y IF RLGL + A+SG IGG +HEF+VL++ GE + S + + + N Sbjct: 181 YTNIFTRLGLNFRAVIADSGAIGGKDNHEFMVLSEIGEDTIAYSDTSSYAANIEMAAVNV 240 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + +E+ P T E + + + + + Sbjct: 241 SYPVSDETPETLEKVATPGKNTITDVAEFFGTTADKCIKTMVFKADEELVIVLARGDHEV 300 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 K A G + + + I + + + I Sbjct: 301 NDVKVKHATGATVIEMATPEEVQQLLGCDIGSLGPINLPEDIRLFADHAVENMVNGIAGA 360 Query: 358 DQ 359 ++ Sbjct: 361 NE 362 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 71/229 (31%), Positives = 112/229 (48%), Gaps = 3/229 (1%) Query: 218 ETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV 277 E + ++ + + ++ A D+ + D+ P+ + Sbjct: 340 EDIRLFADHAVENMVNGIAGANESGYHFKNVTPGKDFTVPAFHDLRFIQEGDASPDGQGT 399 Query: 278 SA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 +GIEVGHIF GT YS+P+ TF GK MG YGIG RV+AAV E D Sbjct: 400 IQFAKGIEVGHIFKLGTTYSIPLKGTFLNDQGKSMPYIMGCYGIGVSRVLAAVAEQFQDE 459 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 G WPD VAP+++ L+ + D R+ E++YA L + +V DD E+ G +FA A Sbjct: 460 NGFTWPDVVAPYEVHLVPVNVKDDTQRELGEELYALLKENRYEVLLDDRKERAGVKFADA 519 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 DL+G P+++ +G K ++ +E+K R TG + + +EV+ F Sbjct: 520 DLIGLPIRITIGKK-AAEGILEVKIRRTGETFEWTRDEVLEKIQQFFKK 567 >gi|299534746|ref|ZP_07048076.1| prolyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1] gi|298729834|gb|EFI70379.1| prolyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1] Length = 568 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 118/235 (50%), Positives = 161/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L+E P DAE+ SHK +LR G I Q++ G+YS+LPL ++ L + IIREE Sbjct: 1 MKQSKTFIPTLREVPADAEVKSHKQLLRAGFIRQNTSGVYSYLPLAKRVLTKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +IE+ +P+LQSA+LW ESGR++ YG E++RL DR+D+ GPTHEEV+T + R Sbjct: 61 MEAINSIELLMPSLQSAELWQESGRWEKYGPELMRLKDRHDRDFALGPTHEEVITTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF + E +Y M+ + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHASRESLDETYEDMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF RLGL + A++G IGG +HEF+VL++ GE + S D+ E Sbjct: 181 YSNIFSRLGLNYRAVIADAGSIGGKGTHEFMVLSEIGEDTIAYSDT-SDYAANIE 234 Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 71/187 (37%), Positives = 97/187 (51%), Gaps = 3/187 (1%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ + D P+ + GIEVGHIF GT YS M+ TF GK MG YG Sbjct: 383 DIRFIQEGDPSPDGQGNIKFAEGIEVGHIFKLGTTYSAKMNGTFLDEQGKAQPFIMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R++AAV E D G WP +AP+ I ++ + D+ E++Y L D Sbjct: 443 IGVSRILAAVAEHFQDDNGFTWPTQLAPYDIHVVPVNTKDEAQVALAEELYGLLKSYRYD 502 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G +FA ADL+G P++V VG K ++ VE+K R TG + EEVI+ Sbjct: 503 VLLDDRPERAGVKFADADLIGLPVRVTVGKK-ATEGIVEVKFRQTGETFEWKKEEVIDRL 561 Query: 439 SHRFSNN 445 + F N Sbjct: 562 NEFFRKN 568 >gi|242046134|ref|XP_002460938.1| hypothetical protein SORBIDRAFT_02g037830 [Sorghum bicolor] gi|241924315|gb|EER97459.1| hypothetical protein SORBIDRAFT_02g037830 [Sorghum bicolor] Length = 648 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 81/445 (18%), Positives = 154/445 (34%), Gaps = 42/445 (9%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQN 62 K ++ +E R D L L + I G+ W P G + ++ Sbjct: 239 KAYIHFKEEAKRRDHRRLGQDLDLFS--IQDDAGGGLVFWHPKGAIIRHILEDSWKQIHL 296 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G + P + ADLW SG D Y + M D D+ P + +++ + Sbjct: 297 QHGYDLLYTPHVAKADLWKISGHIDFYKESMYNQMDVEDEMYQLRPMNCPYHILVYKRKL 356 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+ P ++ +R EL G+ R R F DA+ F L + + Sbjct: 357 HSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDE-IRGVLDLT 415 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +I + G + + + P + D + + DD Sbjct: 416 EQILGQFGFRYYEINLSTRPEKS-----------------VGTDDIWEKATIALKNALDD 458 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ K+ D+L + S ++ F ++ T Sbjct: 459 KGWEYKVDEGGGAFYGPKIDL---KIEDALGRKWQCSTVQVD----FNLPERFD----IT 507 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + ++ + + +G++ V+ + +P +AP + ++ + ++ Sbjct: 508 YVDSNSEKKRPIMIHRAILGSLERFFGVLI---EHYAGDFPLWLAPTQARILPVTDNE-- 562 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C ++ + L G V GE++ A+ PL +VG K V + I+ Sbjct: 563 -LQYCNEVASELKSRGLRVEV-CHGERLPKLIRNAETQKVPLMAVVGPKEVQARTLTIRS 620 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R G M ++E I +N Sbjct: 621 RHNGEIGTMPVDEFITRLQLAVANK 645 >gi|224532379|ref|ZP_03673009.1| threonine--tRNA ligase [Borrelia burgdorferi WI91-23] gi|224512686|gb|EEF83057.1| threonine--tRNA ligase [Borrelia burgdorferi WI91-23] Length = 581 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 71/443 (16%), Positives = 156/443 (35%), Gaps = 37/443 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L + +E RD +L L + + G+ + P G K + REE ++ Sbjct: 172 RSYLNLREEIKKRDHRKLGKELDLFSIH-EEIGPGLVFFHPNGAKIRALIEDFWREEHSK 230 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + LW SG D Y M + + P + I+ + Sbjct: 231 NGYDILFTPHIGKSWLWQTSGHLDFYKDSMFEKIEMDKSDYYLKPMNCPFHIAIYNTGKH 290 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LPF + ++ +R E G+MR+R F DA+ + ++ + Sbjct: 291 SYRDLPFRWAELGTVYRYEKIGALHGMMRARGFTQDDAHIICTHSQVLDE-IKEVLRFAI 349 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ + G ++ + P + + + + D Sbjct: 350 YMWSKFGFSNLKAYLSTKP-----------------DKSVGNDSDWEMSLKVLEETLSDF 392 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I + A Y D+ K+ DSL ++S + F ++++ +A Sbjct: 393 EVPYEIDKGGGAFYGPKIDL---KIVDSLEREWQMSTIQFD----FNLPERFNMTYTAE- 444 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ ++ + G +W V I + NI Sbjct: 445 --DGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPLWLSPVQVVIIPVNNI------VE 496 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D K++ + G + D+ ++ ++ P I+G + ++ ++ I+ R Sbjct: 497 DYAIKVFNKFKNGGIRIKLDNSSSRMNAKIREYQAKKIPYMFIIGEREATEERISIRTRT 556 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L+E + + + + Sbjct: 557 NEQINGIKLDEALKFILFKIRDK 579 >gi|220903768|ref|YP_002479080.1| threonyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254783519|sp|B8J4E4|SYT_DESDA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|219868067|gb|ACL48402.1| threonyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 647 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 76/436 (17%), Positives = 146/436 (33%), Gaps = 41/436 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L ++E R D +L L T + G+ WLP G + R+E + G Sbjct: 233 YLKQMEEAKRRDHRKLGRELSLFT-FKEDVAPGMVFWLPKGMLVRTILEDFWRKEHLKRG 291 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P L + W +SG YD Y + M + A P + I+ + + SY Sbjct: 292 YDIVQGPQLLRVETWQKSGHYDHYRENM-YFTQIEEDAYGVKPMNCISHMLIYGNELHSY 350 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++++ + R E G++R R+F DA+ + + + Sbjct: 351 RDLPQRYFELGVVHRHEKSGVLHGLLRVRQFTQDDAHIICAPEQLEGEILEVIHLI---- 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + E+ V T + + + + + Sbjct: 407 ---------------RDLMNLFGFEYKVAVSTRPESSIGTDEAWEMATSALVQAVEKAGL 451 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 +I E A Y DV L D + + S ++ F ++ T+ G Sbjct: 452 PYTINEGDGAFYGPKIDVR---LLDCIGREWQCSTIQVD----FTLPERFD----LTYVG 500 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG+ H + +G++ ++ + G W +++ + + Sbjct: 501 QDGERHRPVMVHRAIMGSLERFIGILVENFAGALPTWLAPEQARLLTVT------EAGDE 554 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 A + +G D E++G + A L P ++VG K V ++ R Sbjct: 555 AVSSMLEEFKALGIRAQADTRNEKLGFKVREAQLAKVPYILVVGEKEVQAGGANVRLRNG 614 Query: 424 GIREDMSLEEVINYAS 439 S+ E+ Sbjct: 615 DNLGLKSVAEIAALIR 630 >gi|10438145|dbj|BAB15178.1| unnamed protein product [Homo sapiens] Length = 402 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 136/423 (32%), Positives = 217/423 (51%), Gaps = 35/423 (8%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 ML+ G+I+ S G Y LP +A++ + +I +E G ++++P+L A+LW + R Sbjct: 1 MLQVGLIYPASPGCYHLLPYTVRAMEKLVRVIDQEMQAIGGQKVNMPSLSPAELWQATNR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMT-DIFRSHIKSYRNLPFTFYQIQLKFRDELR 144 +D GKE+LRL DR+ K GPTHEE +T I SY+ LPF YQ+ KFRDE R Sbjct: 61 WDLMGKELLRLRDRHGKEYCLGPTHEEAITALIASQKKLSYKQLPFLLYQVTRKFRDEPR 120 Query: 145 PRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGG 204 PRFG++R REF MKD Y+FD +PE ++ +Y+ + +Y +F++LGL + ++A+ G IGG Sbjct: 121 PRFGLLRGREFYMKDMYTFDSSPEAAQQTYSLVCDAYCSLFNKLGLPFVKVQADVGTIGG 180 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 +SHEF + D GE ++ + A + Sbjct: 181 TVSHEFQLPVDIGEDRLAICPRC--------------------------SFSANMETLDL 214 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRV 324 ++ + +GIEVGH FY GTKYS +A F GK +MG YG+G R+ Sbjct: 215 SQMNCPACQGPLTKTKGIEVGHTFYLGTKYSSIFNAQFTNVCGKPTLAEMGCYGLGVTRI 274 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKA--HDQVCRDACEKIYARLSKV----GCD 378 +AA IE + WP +AP++ LI K +Q + ++Y +++ + Sbjct: 275 LAAAIEVLSTEDCVRWPSLLAPYQACLIPPKKGSKEQAASELIGQLYDHITEAVPQLHGE 334 Query: 379 VFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSK-VEIKHRLTGIREDMSLEEVIN 436 V DD IG++ A+ G+P +I G + + D E+ + TG ++ + V++ Sbjct: 335 VLLDDRTHLTIGNRLKDANKFGYPFVIIAGKRALEDPAHFEVWCQNTGEVAFLTKDGVMD 394 Query: 437 YAS 439 + Sbjct: 395 LLT 397 >gi|294811598|ref|ZP_06770241.1| Threonyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|294324197|gb|EFG05840.1| Threonyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] Length = 719 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 65/449 (14%), Positives = 139/449 (30%), Gaps = 38/449 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y + + RD +L L + + G+ + P G + R+ Sbjct: 306 LKQYLEFLAEAEKRDHRRLGSELDLFSV-PDEIGSGLAVFHPRGGIVRRVMEDYSRKRHE 364 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSH 121 G + P L+ +SG D Y + M P + + IF + Sbjct: 365 EEGYEFVYTPHATKGTLFEKSGHLDWYAEGMYPPMQLDGGTDYYLKPMNCPMHNLIFDAR 424 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SYR LP ++ +R E G+ R+R F DA+ + + ++ ++ Sbjct: 425 GRSYRELPLRLFEFGTVYRHEKSGVVHGLTRARGFTQDDAHIYCTREQMAEEL-DRTLTF 483 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 L + GL + + + S + + + Sbjct: 484 VLNLLRDYGLTDFYLELST----------------KDPEKYVGSDETWEEATEVLRRVAE 527 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + A Y + + D++ ++S ++ F ++ + Sbjct: 528 KQGLPLTPDPGGAAFYGPKI---SVQARDAIGRTWQMSTIQLD----FNLPERF----NL 576 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + DG + G++ AV+ + P +AP + I I Sbjct: 577 EYTAPDGSRQRPVMIHRALFGSIERFFAVLL---EHYAGAMPPWLAPVQAVGIPIG---D 630 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + + A K G V D +++ + L P +IVG + ++ V + Sbjct: 631 AHIEYLQSFAAEAKKRGLRVDVDASSDRMQKKIRNHQKLKVPFMIIVGDEDMNAGTVSFR 690 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNRPV 448 +R + + + ++ V Sbjct: 691 YRDGSQENGIPRDAALAKLEQVVADRVQV 719 >gi|161344091|ref|YP_400976.2| prolyl-tRNA synthetase [Synechococcus elongatus PCC 7942] gi|114152269|sp|Q31LT0|SYP_SYNE7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 600 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 115/240 (47%), Positives = 154/240 (64%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + + GIY++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLREDPAEAEIPSHKLLLRAGYIRRIASGIYAYLPLMWRVLRKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + TGA E +P LQ A+LW ESGR+++Y K M L DR + + GPTHEEV+T + Sbjct: 61 MDATGAQETLLPQLQPAELWQESGRWETYTKAEGIMFSLDDRQQRQLGLGPTHEEVITAV 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E + +Y M Sbjct: 121 ARDLIRSYRQLPQNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADEESLRQTYAAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y IF R GL+ + A+SG IGG S EF++LAD GE ++ ++D + E Sbjct: 181 DQAYRNIFRRCGLQFRAVEADSGAIGGSASQEFMILADAGEDEILYTEDGR-YAANVEKA 239 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 63/168 (37%), Positives = 92/168 (54%), Gaps = 1/168 (0%) Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 SARGIE GHIF G KYS M ATF +G + + MG YGIG RV A +E S+D Sbjct: 430 LASARGIEAGHIFQLGLKYSQAMGATFTTENGTEEPLWMGCYGIGVSRVAQAAVEQSYDK 489 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 GIIWP ++AP++ ++ D A EKIYA L+ G + DD E+ G +F A Sbjct: 490 DGIIWPVAIAPYQAVVVIPNITDTEQVAAAEKIYADLTAAGIETLLDDRDERAGVKFKDA 549 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 DL+G P +++ G + + + KVE+ R + +++ V+ + Sbjct: 550 DLIGIPYRIVTG-RSLKEGKVEVVQRASKESSVIAVGSVVETVQDWIA 596 >gi|81169649|gb|ABB57989.1| prolyl-tRNA synthetase [Synechococcus elongatus PCC 7942] Length = 606 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 115/240 (47%), Positives = 154/240 (64%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + + GIY++LPL + L V+ I+REE Sbjct: 7 MRLSQMLFVTLREDPAEAEIPSHKLLLRAGYIRRIASGIYAYLPLMWRVLRKVSQIVREE 66 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + TGA E +P LQ A+LW ESGR+++Y K M L DR + + GPTHEEV+T + Sbjct: 67 MDATGAQETLLPQLQPAELWQESGRWETYTKAEGIMFSLDDRQQRQLGLGPTHEEVITAV 126 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E + +Y M Sbjct: 127 ARDLIRSYRQLPQNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADEESLRQTYAAM 186 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y IF R GL+ + A+SG IGG S EF++LAD GE ++ ++D + E Sbjct: 187 DQAYRNIFRRCGLQFRAVEADSGAIGGSASQEFMILADAGEDEILYTEDGR-YAANVEKA 245 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 63/168 (37%), Positives = 92/168 (54%), Gaps = 1/168 (0%) Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 SARGIE GHIF G KYS M ATF +G + + MG YGIG RV A +E S+D Sbjct: 436 LASARGIEAGHIFQLGLKYSQAMGATFTTENGTEEPLWMGCYGIGVSRVAQAAVEQSYDK 495 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 GIIWP ++AP++ ++ D A EKIYA L+ G + DD E+ G +F A Sbjct: 496 DGIIWPVAIAPYQAVVVIPNITDTEQVAAAEKIYADLTAAGIETLLDDRDERAGVKFKDA 555 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 DL+G P +++ G + + + KVE+ R + +++ V+ + Sbjct: 556 DLIGIPYRIVTG-RSLKEGKVEVVQRASKESSVIAVGSVVETVQDWIA 602 >gi|58584729|ref|YP_198302.1| threonyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|73919844|sp|Q5GSG4|SYT_WOLTR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|58419045|gb|AAW71060.1| Threonyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 632 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 157/441 (35%), Gaps = 40/441 (9%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L L+E RD + + L I + + G W G + + + IR++ Sbjct: 227 NIYLKRLEEAKKRDHRRIAKDMDLF--HIQEEAVGQVFWHEQGYTLYNVLESYIRKKLIN 284 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L S +LW +SG +D + + M + + K + P + IF S+ + Sbjct: 285 NGYAEVKTPILVSKELWEKSGHWDKFRENMFIVDESESKKLAIKPMNCPCHVQIFNSYTR 344 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYRNLP + + R+E G+MR R F DA+ F + + + + Sbjct: 345 SYRNLPIRMAEFGMCHRNESSGSLHGLMRVRGFTQDDAHIFCMEEQVNSETVKF-CALLK 403 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ LG I ++ P +E D + + Sbjct: 404 EVYSELGFNEISVKFSDRPNVRAGDNE-----------------VWDRAEKALLEAVKEA 446 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + L D++ + + ++ G A + Sbjct: 447 GLSYELNPGEGAFYGPKLEFI---LKDAIGRSWQCGTLQVDFILPERLG--------AFY 495 Query: 303 KGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 GADG+ H V + +G ++ + GK +W +++ N Sbjct: 496 IGADGQKYHPVMLHRAILGTFERFIGILIEHYAGKFPLWLAPTQLVILTVTN------EA 549 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + +I L + G V D E++ + + P+ IVG V+ V +++ Sbjct: 550 DNYATEISNVLKEQGVRVKTDLTNEKVSYKIRLHSSNKVPILWIVGKNEVASKTVSVRNL 609 Query: 422 LTGIREDMSLEEVINYASHRF 442 + +E S E+ + + Sbjct: 610 GSEKQESSSCEKAVKLLLKKV 630 >gi|257453930|ref|ZP_05619207.1| prolyl-tRNA synthetase [Enhydrobacter aerosaccus SK60] gi|257448702|gb|EEV23668.1| prolyl-tRNA synthetase [Enhydrobacter aerosaccus SK60] Length = 586 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 122/273 (44%), Positives = 170/273 (62%), Gaps = 2/273 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L+E P DA+I S +LMLR GMI + + G+Y+WLP+G K L V IIREE Sbjct: 1 MRASQFTFATLKETPSDADIISSQLMLRAGMIRKSASGLYTWLPMGLKTLQKVKKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + E+ +P +QSA+LW ESGR+++YG E+LR DR+ + + GPTHEEV+TDI R+ Sbjct: 61 MDAINCQELLMPVVQSAELWQESGRWEAYGPELLRFKDRHQRDFVLGPTHEEVITDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP ++YQ+Q KFRDE+RPRFGVMRSREF+MKDAYSF + + +Y+ M+ + Sbjct: 121 LLKSYKQLPVSYYQVQTKFRDEIRPRFGVMRSREFIMKDAYSFHIDQPSLQRTYDDMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP--IPSENTD 238 Y IF RLGL ++A++G IGG SHEF VLA +GE + S +E Sbjct: 181 YHNIFTRLGLDFRAVQADTGSIGGFASHEFQVLAGSGEDDIVFSDSSAYAANIELAEAVT 240 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + + + P T + E L L Sbjct: 241 LGERAAATQNKTAVSTPNMPTCEQVAEHLGLPL 273 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 61/206 (29%), Positives = 90/206 (43%), Gaps = 16/206 (7%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A +D+ N D P+ + RGIEVGHIF G KY+ ++ G GK Sbjct: 376 ERDASITEIADIRNVVEGDPSPDGQGTLQIRRGIEVGHIFQLGDKYAKALNCAVMGEQGK 435 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSV------APFKISLINIKAH----- 357 MG YGIG R+VAA IE +HD GIIW S + IK Sbjct: 436 PVITMMGCYGIGVTRIVAAAIEQNHDDNGIIWKTSSTGESLAPFTVAIVPMIKGKMKDAA 495 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV-SDSKV 416 E +Y L G DV DD E+ G +FA +L+G P ++++ K + +V Sbjct: 496 TDKAMQLAEALYTELKAQGVDVLLDDRDERAGVKFADLELIGIPHRIVISEKNISETGEV 555 Query: 417 --EIKHRLTGIREDMSLEEVINYASH 440 E +R G ++ ++ ++ Sbjct: 556 KYEYVNRQDGEKQLLTAAQLNQLFKD 581 >gi|255994086|ref|ZP_05427221.1| proline--tRNA ligase [Eubacterium saphenum ATCC 49989] gi|255993754|gb|EEU03843.1| proline--tRNA ligase [Eubacterium saphenum ATCC 49989] Length = 582 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 117/295 (39%), Positives = 169/295 (57%), Gaps = 17/295 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK + L+E P +AE+ SH L+LR GMI + + G+Y ++P+G KAL + IIR E Sbjct: 1 MRLSKAYFKTLREVPAEAELKSHILLLRAGMIRKLASGVYGYMPMGLKALKKIENIIRNE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ + LQ A+LW ESGR+++YG EM R+ DR+D+ GPTHEEV TDI R+ Sbjct: 61 MDAEGCQEILMSALQPAELWKESGRWNAYGPEMWRVCDRHDREFCLGPTHEEVFTDIIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + S+R LP YQIQ K+RDE RPRFG+MRSREF+MKD+YSFD EG SY M+ Sbjct: 121 DVDSHRKLPINLYQIQTKYRDEARPRFGLMRSREFIMKDSYSFDKDEEGLDVSYENMYKR 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF------------- 227 Y +F R+ L +P+ A++G +GG+ SHEFI AD GE+++ Sbjct: 181 YENVFKRMELDVMPVEADTGAMGGNGSHEFIAKADAGESEIAFCPSCKMAATVERAVCGK 240 Query: 228 ----MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS 278 + +P ++ S+ E P + K+ + + + V+ Sbjct: 241 VKPSSEAELPMNKVHTPGTKTIESVCEYLNKPTDKSIKAIFLKVIPAEGDEQLVA 295 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 102/207 (49%), Gaps = 9/207 (4%) Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 + + A A E + K + RGIEVG +F GTKYS PM A +K D Sbjct: 376 NYGRDYEADIVADIKQLLEGDPCPVCGEKILYTRGIEVGQLFKLGTKYSEPMKAIYKDED 435 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + + MGSYGIG R +AAVIE + D GIIWP VAP+ + + I D+ E Sbjct: 436 MNERLMYMGSYGIGVSRTLAAVIEQNSDENGIIWPLPVAPYHVIITLINPSDKDQTALAE 495 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT--- 423 IY +L K DV DD E+ G +F ADL+G P ++ VG + +D KVE K R + Sbjct: 496 DIYEKLRKSNIDVILDDRDERPGVKFKDADLIGIPFRINVG-RDAADGKVEFKVRGSNYG 554 Query: 424 ---GIREDMSLE--EVINYASHRFSNN 445 RE + ++ E + S N Sbjct: 555 MDMKKRETVVIDSNEAVKNIISVVSEN 581 >gi|269977288|ref|ZP_06184261.1| threonyl-tRNA synthetase [Mobiluncus mulieris 28-1] gi|269934591|gb|EEZ91152.1| threonyl-tRNA synthetase [Mobiluncus mulieris 28-1] Length = 669 Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats. Identities = 65/456 (14%), Positives = 138/456 (30%), Gaps = 48/456 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K ++ L+E RD +L L + + G+ + P G + R+ Sbjct: 246 KAYVTRLEEAEKRDHRRLGTELDLFS-FPEEIGSGLPVFHPKGALVRMEMENYSRQRHLE 304 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHE 111 G +S P + L+ SG Y + M + P + Sbjct: 305 EGYSFVSTPHVTKGQLFETSGHLSWYKEGMFPAMHLDEERDAQGNVTKEGADYYLKPMNC 364 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF+S +SYR LP ++ +R E G+ R+R F D++ + + Sbjct: 365 PMHNLIFKSRTRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDSHIYCTRDQMK 424 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L + GL + + + S + + Sbjct: 425 DELTK-LLTFVLDLLKDYGLDDFYLELST----------------KNPQKFVGSDEVWEE 467 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + + A Y + + D++ ++S ++ F Sbjct: 468 ATRTLQEVAEASGLELRPDPEGAAFYGPKI---SVQARDAIGRTWQMSTIQLD----FNL 520 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 ++ L +A + V + G++ V+ + G W Sbjct: 521 PERFELEYTAA---DGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAW------LAPV 571 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 + + CE + +L V D+ ++ G + A P +IVG + Sbjct: 572 QVRLVPVADTFNAYCEDVAKQLRAENVRVEIDESDDRFGKKIRNAAKDKVPFTLIVGGED 631 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 V ++R + + + I + + + Sbjct: 632 AEHGAVSFRYRGGEQKNGVKISAAIQEITETIRSRK 667 >gi|46447649|ref|YP_009014.1| threonyl-tRNA synthetase [Candidatus Protochlamydia amoebophila UWE25] gi|73919812|sp|Q6M9L0|SYT_PARUW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|46401290|emb|CAF24739.1| probable threonine-tRNA ligase [Candidatus Protochlamydia amoebophila UWE25] Length = 650 Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats. Identities = 82/447 (18%), Positives = 149/447 (33%), Gaps = 39/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K +L L+E RD ++ KL L + + + + G+ P G + + A IRE Sbjct: 230 KLLKDYLHQLEEAKKRDHKLLGAKLDLFS--LKEEAPGMPFIHPKGLIVWNQLVAYIREC 287 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R IE+ PT+ + +LW SG + +Y + M ++ D+ P + ++S Sbjct: 288 LSRHDYIEIKTPTMMTKELWEISGHWGNYRQNMF-ISQIEDRDFAIKPMNCPGCMLYYKS 346 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 H SYR LP +I R E G+ R R F DA+ F P + + Sbjct: 347 HTHSYRELPLRIAEIGNVHRYEPSGSLSGLFRVRSFHQDDAHIFMK-PSDIQQEILGVLA 405 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 I+ GL + + P E + + Sbjct: 406 LADEIYSTFGLSY-RLELSTRP----------------EKNTIGTDHEWEVATAGLKGAL 448 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D++ I E A Y D H + D++ + + +++ F +Y Sbjct: 449 DEMGKEYRINEGDGAFYGPKIDFH---IRDAINRSWQCGTIQLDMALPEKFELEY----- 500 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 TF + + + R +IE + S F Sbjct: 501 -TFSDGTRQRPVMIHRAIFGSIERFFGILIEHYVGKFPLWLSPSQIRFITVA-------D 552 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ++ R G V D E + + A L F + +G + V ++ Sbjct: 553 RHEPYARELAKRFKNAGFHVDVDSTQESVSKKVRNAQLAQFNYILTIGDQEVEHKTANLR 612 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 R + ++ ++E I + Sbjct: 613 TRDNVVHGEIQIDEFIQKLEIEKQQRQ 639 >gi|308173840|ref|YP_003920545.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7] gi|307606704|emb|CBI43075.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7] Length = 642 Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 155/445 (34%), Gaps = 44/445 (9%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 +L+E R+ +L L M + + G+ +LP GQ + + + +R +Q+ Sbjct: 234 FQLLKEAEKRNHRKLGAELQLF--MFSEEAPGMPFYLPNGQFIRNTLESFLRSKQDAYHY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + + LW +SG +D Y + M ++ + + P + IF+ ++SYR Sbjct: 292 QEVRTPMMMNQRLWEQSGHWDHYKENM-YFSEADQQRFALKPMNCPGHMLIFKERLRSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP + R E G++R R F DA+ F TPE + ++ Sbjct: 351 ELPIRMAEFGQVHRHEFSGALNGLLRVRSFCQDDAHIFV-TPEQIESEIASALQLIHEVY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G + P S+ D + + Sbjct: 410 TAFGFSYDI-ELSTRP-----------------EDYMGSEHLWDRAESALERVLKEQGYD 451 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 A Y D+H + D+L + + + ++ F K+ T+ Sbjct: 452 FRFNRGDGAFYGPKIDIH---IKDALNRSHQCATVQLD----FQMPEKFD----LTYIDE 500 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + V + G++ +I + G +W + I + RD Sbjct: 501 KNQKVRPVVIHRAVFGSLDRFLGIITEHYGGAFPLWLA-----PVQAKIIPVSNTAHRDC 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E+++ ++ K G D E++G + A + P +VG + V ++ Sbjct: 556 AEQVHRQMKKAGIRAELDQRDEKLGYKIREAQMKKIPYIAVVGDQECRHHTVHVRQYGQE 615 Query: 425 IREDMSLEEVINYASHRFSNNRPVL 449 + S+ + I+ + + V+ Sbjct: 616 NTFEESVSDFISRI---INETKQVI 637 >gi|221217966|ref|ZP_03589433.1| threonyl-tRNA synthetase [Borrelia burgdorferi 72a] gi|224533347|ref|ZP_03673941.1| threonyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a] gi|225549973|ref|ZP_03770934.1| threonyl-tRNA synthetase [Borrelia burgdorferi 118a] gi|221192272|gb|EEE18492.1| threonyl-tRNA synthetase [Borrelia burgdorferi 72a] gi|224513512|gb|EEF83869.1| threonyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a] gi|225369432|gb|EEG98884.1| threonyl-tRNA synthetase [Borrelia burgdorferi 118a] Length = 581 Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats. Identities = 72/443 (16%), Positives = 154/443 (34%), Gaps = 37/443 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L + +E RD +L L + + G+ + P G K + REE ++ Sbjct: 172 RSYLNLREEIKKRDHRKLGKELDLFSIH-EEIGPGLVFFHPNGAKIRALIEDFWREEHSK 230 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + LW SG D Y M + + P + I+ + Sbjct: 231 NGYDILFTPHIGKSWLWQTSGHLDFYKDSMFEKIEMDKSDYYLKPMNCPFHIAIYNTGKH 290 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LPF + ++ +R E G+MR+R F DA+ + ++ + Sbjct: 291 SYRDLPFRWAELGTVYRYEKIGALHGMMRARGFTQDDAHIICTHSQVLDE-IKEVLRFAI 349 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ + G + + P + + + + D Sbjct: 350 YMWSKFGFSNPKAYLSTKP-----------------DKSVGNDSDWEMSLKVLEETLSDF 392 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I + A Y D+ K+ DSL ++S + F ++++ +A Sbjct: 393 EVPYEIDKGGGAFYGPKIDL---KIVDSLEREWQMSTIQFD----FNLPERFNMTYTAE- 444 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ ++ + G +W V I + NI Sbjct: 445 --DGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPLWLSPVQVVIIPVNNI------VE 496 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D K++ + G + D+ ++ ++ P I+G + + ++ I+ R Sbjct: 497 DYAIKVFNKFKNEGIRIKLDNSSSRMNAKIREYQAKKIPYMFIIGEREAIEERISIRTRT 556 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 M L+E + + + + Sbjct: 557 NEQINGMKLDEALKFILFKIRDK 579 >gi|153003352|ref|YP_001377677.1| prolyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5] gi|166980097|sp|A7H7J7|SYP_ANADF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|152026925|gb|ABS24693.1| prolyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5] Length = 575 Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats. Identities = 108/263 (41%), Positives = 149/263 (56%), Gaps = 3/263 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ F+P L+E P DA++ASHKL++R G I Q GIY +LPL ++ L + AI+REE Sbjct: 5 RLSQAFVPTLKEAPADAQVASHKLLVRAGFIRQLGAGIYDYLPLAKRTLAKIEAIVREEM 64 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E +P L A++W ESGR++ G M RL DR + G THEE+ T I R Sbjct: 65 DAIGGQEFYLPALHPAEIWKESGRWEVMGDNMFRLKDRKNGDYCLGMTHEEIFTAIARDE 124 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 ++SYR LP +YQIQ KFRDE RP+ G++R R+F MKDAYSFD+ G SY +Y Sbjct: 125 LRSYRQLPQVWYQIQTKFRDEPRPKSGLLRVRQFTMKDAYSFDVDRAGLDKSYEDQRRAY 184 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF---MDFPIPSENTD 238 RIF R GL + ++A SG +GG S EF+V D GE V + + Sbjct: 185 ERIFTRCGLDFVAVQAHSGAMGGSESSEFMVRTDAGEDLVAACPRCRYAANTETATSRLA 244 Query: 239 FDDIISLNSIVEQWTAPYAATSD 261 + + E++ P T + Sbjct: 245 SEQDGAGLPKPEKFATPGVVTIE 267 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 107/197 (54%), Gaps = 3/197 (1%) Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 T P+A +++ + + P + +EVGHIF GTKYS M AT ADGK Sbjct: 380 LTGPHATVAELRTVRAGEGCPRCDGTLDVFKALEVGHIFKLGTKYSESMKATVLDADGKA 439 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + MGSYGIG R++AA IE HD GI WP ++APF+ +++ + + + A +++ Sbjct: 440 VPIVMGSYGIGVERIMAAAIELHHDELGIRWPPAIAPFQATVLTLGP-EPELKKAADELV 498 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 LS G +V DD E+ G +F ADL+G PL++ VG K +++ KVE K R E + Sbjct: 499 KALSDAGLEVLHDDREERAGVKFKDADLVGIPLRISVGKKGLAEGKVEWKLRGDKAVELV 558 Query: 430 SLEEVINYASHRFSNNR 446 L EV A+ R Sbjct: 559 PLAEVARRAAEHVRAGR 575 >gi|327441016|dbj|BAK17381.1| prolyl-tRNA synthetase [Solibacillus silvestris StLB046] Length = 568 Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats. Identities = 120/269 (44%), Positives = 174/269 (64%), Gaps = 10/269 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+++K F+P L+ENP DA++ SH+++LR G I Q++ G+YS+LPL ++ L + IIREE Sbjct: 1 MKQTKTFIPTLRENPSDADVKSHRMLLRAGFIRQNAAGVYSYLPLARRVLSKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +IE+ +P LQ A+LW ESGR+++YG E++RL DR+D+ G THEEV+T + R Sbjct: 61 MEAINSIELLMPALQPAELWQESGRWEAYGPELMRLKDRHDRDFALGATHEEVITTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF + E +Y+ M+ + Sbjct: 121 EIKSYKKLPLTLYQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHSSRESLDATYDDMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL + A++G IGG +HEF+VL++ GE + S D+ E Sbjct: 181 YSNIFTRLGLNFRAVIADAGTIGGKGTHEFMVLSEIGEDTIAYSDT-SDYAANIE----- 234 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFD 269 + +V ++TAP D+ + D Sbjct: 235 ----MAEVVVEYTAPTTPMKDIEKIETPD 259 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 111/208 (53%), Gaps = 3/208 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLP 297 +D L ++ + ++ D+ + D P+ + + GIEVGHIF GT YS Sbjct: 362 EDGFHLLNVNPERDFAISSYEDIRFIQQGDPSPDGQGIIKFAEGIEVGHIFKLGTTYSEK 421 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 ++ATF GK MG YGIG R++AAV E D G +WP +AP+ + L+ + A Sbjct: 422 LNATFLDEQGKAKPYIMGCYGIGVSRILAAVAEHFQDENGFVWPAQLAPYDLQLVPVNAK 481 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D+ +++Y L +V +D+ E+ G +FA ADL+G P+++ VG K S+ VE Sbjct: 482 DEAQVQLADELYGVLKSYRYEVLYDNRAERAGVKFADADLIGLPVRITVGKK-ASEGLVE 540 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 +K R TG + + EEV++ + F N Sbjct: 541 VKFRSTGESAEWAKEEVVDRLNEYFRQN 568 >gi|320529253|ref|ZP_08030345.1| prolyl-tRNA synthetase [Selenomonas artemidis F0399] gi|320138883|gb|EFW30773.1| prolyl-tRNA synthetase [Selenomonas artemidis F0399] Length = 570 Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats. Identities = 118/285 (41%), Positives = 170/285 (59%), Gaps = 2/285 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + + P L+ P +AEIASH+L+ R G+I + + G+Y++LPL + L + IIREE Sbjct: 1 MRATNLYAPTLRNTPAEAEIASHRLLYRAGLIRKSAGGMYTYLPLAWRTLRKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P LQ A+LW ESGR+ +YG EM+R+ DR+++A GPTHEE++T + R Sbjct: 61 MDAAGGQEIMMPILQPAELWEESGRWGAYGAEMMRIQDRHERAFCLGPTHEEMITALVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ KFRDE RPRFGVMRSREF+M+D YSFD EG SY KM+ + Sbjct: 121 ELRSYKQLPVMLYQIQDKFRDERRPRFGVMRSREFIMQDLYSFDKDVEGMHESYRKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP--IPSENTD 238 Y +F R GL + A+ G IGG S EF VLA GE+++ C ++ Sbjct: 181 YTNVFTRCGLNFRAVEADCGAIGGGRSEEFTVLAPEGESRIACCDACSYAASDEKAQLRP 240 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 D +E+ + P+ +T + E L + + + A E Sbjct: 241 LDAPDEAELPLEKVSTPHTSTIALLAEFLKIPVEKTIKAVAYQTE 285 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 70/218 (32%), Positives = 107/218 (49%) Query: 226 DFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 M + N ++N + + A V L + E +RGIE G Sbjct: 351 MRMKNAVSGANEQDYHYTNVNPVRDFAHVTVADIRLVAEGDLCPACGEGHLHISRGIEAG 410 Query: 286 HIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 IF GTKYS M A F DGK +QMG YGIG R +AA IE +HD GIIWP ++A Sbjct: 411 QIFALGTKYSEAMQANFLDVDGKLKPLQMGCYGIGVGRTMAAAIEQNHDEHGIIWPRAIA 470 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405 P+++ ++ + A + E+IY L G DV DD E+ G +F DL+G+P+++ Sbjct: 471 PYEVVVVAVNAKVEEQLAYAEEIYEELRAAGIDVLLDDRRERAGVKFNDCDLIGYPVRIA 530 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 +G K + + +E+K R TG + + + + + Sbjct: 531 IGPKTIENGSIEVKLRRTGELVNFARDTYLKGVRDMLA 568 >gi|297626431|ref|YP_003688194.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922196|emb|CBL56764.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 680 Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats. Identities = 71/451 (15%), Positives = 133/451 (29%), Gaps = 47/451 (10%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + + RD +L L + + G+ + P G + + I + G Sbjct: 248 RMAEAAKRDHRKLGQELDLFS-FPEEIGPGLVVFHPKGGILRHEIESYITKRHIDAGFDL 306 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTD 116 + P + DL+ SG Y M + + + Sbjct: 307 VDTPIISKGDLFHTSGHLPYYADTMFPPMTVDEEVDAEGNVRHQGQEYYLKAMNCPMHNL 366 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IFRS +SYR LP FY++ FR E G+ R R F D++++ + Sbjct: 367 IFRSRGRSYRELPLRFYELGRDFRYEKSGVVQGLTRMRGFTQDDSHTYCTPEQAGDE-IK 425 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 + +L I GLK + + S + + Sbjct: 426 MLLGFFLSILRDFGLKEFYLELSTRDASSSKF--------------IGSDEDWEAATEIL 471 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 + A Y + + D+L ++S + FG Sbjct: 472 RVAAESTGLELVADPGGAAFYGPKV---SVQAKDALGRTWQMSTVQYDFNQPARFG---- 524 Query: 296 LPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + ADG + +G++ V+ + G W V I + Sbjct: 525 ----LEYTAADGSHQQPVMIHCAKLGSVERFIGVLTEHYAGAFPAWLSPVQVVGIPVAG- 579 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 + I RL + G V D+ +++ + A P +I G K Sbjct: 580 -----EFNGYLDTIATRLREKGVRVEVDESDDRMQKKIRNATRQKVPFMLIAGEKDREAQ 634 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + R + +++ I+ ++ Sbjct: 635 AVSFRFRDGSQLNGVPIDDAIDRIVEHITSR 665 >gi|56752145|ref|YP_172846.1| prolyl-tRNA synthetase [Synechococcus elongatus PCC 6301] gi|81820564|sp|Q5N044|SYP_SYNP6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|56687104|dbj|BAD80326.1| proline-tRNA ligase [Synechococcus elongatus PCC 6301] Length = 600 Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats. Identities = 115/240 (47%), Positives = 154/240 (64%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + + GIY++LPL + L V+ I+REE Sbjct: 1 MRLSQMLFVTLREDPAEAEIPSHKLLLRAGYIRRIASGIYAYLPLMWRVLRKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + TGA E +P LQ A+LW ESGR+++Y K M L DR + + GPTHEEV+T + Sbjct: 61 MDATGAQETLLPQLQPAELWQESGRWETYAKAEGIMFSLDDRQQRQLGLGPTHEEVITAV 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E + +Y M Sbjct: 121 ARDLIRSYRQLPQNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADEESLRQTYAAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y IF R GL+ + A+SG IGG S EF++LAD GE ++ ++D + E Sbjct: 181 DQAYRNIFRRCGLQFRAVEADSGAIGGSASQEFMILADAGEDEILYTEDGR-YAANVEKA 239 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 63/168 (37%), Positives = 92/168 (54%), Gaps = 1/168 (0%) Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 SARGIE GHIF G KYS M ATF +G + + MG YGIG RV A +E S+D Sbjct: 430 LASARGIEAGHIFQLGLKYSQAMGATFTTENGTEEPLWMGCYGIGVSRVAQAAVEQSYDK 489 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 GIIWP ++AP++ ++ D A EKIYA L+ G + DD E+ G +F A Sbjct: 490 DGIIWPVAIAPYQAVVVIPNITDTEQVAAAEKIYADLTAAGIETLLDDRDERAGVKFKDA 549 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 DL+G P +++ G + + + KVE+ R + +++ V+ + Sbjct: 550 DLIGIPYRIVTG-RSLKEGKVEVVQRASKESSVIAVGSVVETVQDWIA 596 >gi|320011858|gb|ADW06708.1| threonyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331] Length = 658 Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats. Identities = 67/442 (15%), Positives = 141/442 (31%), Gaps = 38/442 (8%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD ++L L + + G+ + P G + R G + Sbjct: 252 LEEAAKRDHRKLGNELDLFS-FPDEIGPGLAVFHPKGGVIRRAMEDYSRRRHEEEGYEFV 310 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNL 128 P L+ +SG D Y M +D P + + IF + +SYR L Sbjct: 311 YSPHATKGKLFEKSGHLDWYADGMYPPMQLDDGVDYYLKPMNCPMHNLIFDARGRSYREL 370 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P ++ +R E G+ RSR F DA+ + + ++ ++ L + Sbjct: 371 PLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQMAEEL-DRTLTFVLNLLRD 429 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 GL + + + S + + + + Sbjct: 430 YGLTDFYLELST----------------KDPEKFVGSDEIWEEATETLRQVAEKQGLPLV 473 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 A Y + + D++ ++S ++ F ++ + G DG Sbjct: 474 PDPGGAAFYGPKI---SVQCKDAIGRTWQMSTVQLD----FNLPERFD----LEYTGPDG 522 Query: 308 KDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + G++ AV+ + +P +AP + I I + Sbjct: 523 TKQRPVMIHRALFGSIERFFAVLL---EHYAGAFPVWLAPVQAVGIPIG---DTHIPYLQ 576 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + A+ K G V D +++ + P +I G + +++ V ++R Sbjct: 577 EFAAKARKQGLRVDVDASSDRMQKKIRNQQKQKVPFMIIAGDEDMANGAVSFRYRDGSQE 636 Query: 427 EDMSLEEVINYASHRFSNNRPV 448 + ++E I + + V Sbjct: 637 NGIPVDEAIAKIAKAVEDRVQV 658 >gi|297562207|ref|YP_003681181.1| threonyl-tRNA synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846655|gb|ADH68675.1| threonyl-tRNA synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 657 Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats. Identities = 65/442 (14%), Positives = 135/442 (30%), Gaps = 36/442 (8%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + + + G+ + P G + R G Sbjct: 250 LTFLEEAEKRDHRKLGSELDLFS-IPDEIGSGLAVFHPKGGTVRRVMEDYSRRRHEEDGY 308 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P L+ +SG D Y M + P + + IF + +SY Sbjct: 309 EFVYTPHATKGTLFEKSGHLDWYADGMYPPMQLDGGQDYYLKPMNCPMHHLIFDARGRSY 368 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP ++ +R E G+ R+R F D++ + + + + + L + Sbjct: 369 RELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDSHIYCTKEQMADEL-DSLLTFVLDL 427 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 GL + + + + + + Sbjct: 428 LRDYGLDDFYLELST----------------KDPEKYVGTDEVWEEATEILREAAQKQGL 471 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + + D++ ++S ++ F ++ L +A Sbjct: 472 ELVLDPAGAAFYGPKI---SVQAKDAIGRTWQMSTIQVD----FNMPERFDLEYTAA--- 521 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + V + G++ AV+ + G W V I + Sbjct: 522 DGSRQRPVVIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQAVGIPIA------DEHVPY 575 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ ARL G V D +++ + A P ++ G + VS + V ++R Sbjct: 576 LRELAARLRAEGIRVEVDASDDRMQKKIRNAQKQKVPFMLLAGDEDVSKNAVSFRYRDGS 635 Query: 425 IREDMSLEEVINYASHRFSNNR 446 + L+E + R Sbjct: 636 QNNGVPLDEAVAEIVAAVRERR 657 >gi|209549439|ref|YP_002281356.1| threonyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|238065117|sp|B5ZQK2|SYT_RHILW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|209535195|gb|ACI55130.1| threonyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 668 Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats. Identities = 72/447 (16%), Positives = 146/447 (32%), Gaps = 46/447 (10%) Query: 7 FLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L + RD ++ L + G+ W G + + + +R Sbjct: 234 YLHMLAEAEKRDHRKLGREMDLF--HFQEEGPGVVFWHGKGWRIFQALVSYMRRRL-AVD 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEML-----------RLADRNDKAMIYGPTHEEVM 114 E++ P + LW SG + Y + M + +++ P + Sbjct: 291 YEEVNAPQVLDTALWETSGHWGWYQENMFAVKSAHAMTHPEDKEADNRVFALKPMNCPGH 350 Query: 115 TDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHS 173 IF+ +KSYR LP + L R E G+MR R F DA+ F + + Sbjct: 351 VQIFKHGLKSYRELPIRLAEFGLVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAEC 410 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 L ++ G K I ++ + P S A+ T V I Sbjct: 411 LKIN-DLILSVYEDFGFKEIVVKLSTRPEKRVGSDALWDRAEAVMTDVL-------KTIE 462 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 +++ L A Y + L D++ + ++ FG Sbjct: 463 AQSEGRIKTGIL----PGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG-- 513 Query: 294 YSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 A + ++ + + G+M ++ + G +W + ++ Sbjct: 514 ------AFYIDSNSEKTQPVMIHRAICGSMERFLGILIENFAGHLPLWVSPLQVVVATIT 567 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 ++ L + G +V D E+I + + P+ ++ G K Sbjct: 568 ------SEADAYGLEVAEALREAGLNVETDFRNEKINYKVREHSVTKVPVIIVCGRKEAE 621 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYAS 439 + V I+ + + M L+ ++ + Sbjct: 622 ERTVNIRRLGSQDQVSMGLDAAVDSLA 648 >gi|227875460|ref|ZP_03993601.1| threonyl-tRNA synthetase [Mobiluncus mulieris ATCC 35243] gi|227844014|gb|EEJ54182.1| threonyl-tRNA synthetase [Mobiluncus mulieris ATCC 35243] Length = 692 Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats. Identities = 65/456 (14%), Positives = 138/456 (30%), Gaps = 48/456 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K ++ L+E RD +L L + + G+ + P G + R+ Sbjct: 269 KAYVTRLEEAEKRDHRRLGTELDLFS-FPEEIGSGLPVFHPKGALVRMEMENYSRQRHLE 327 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHE 111 G +S P + L+ SG Y + M + P + Sbjct: 328 EGYSFVSTPHVTKGQLFETSGHLSWYKEGMFPAMHLDEERDAQGNVTKEGADYYLKPMNC 387 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF+S +SYR LP ++ +R E G+ R+R F D++ + + Sbjct: 388 PMHNLIFKSRTRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDSHIYCTRDQMK 447 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L + GL + + + S + + Sbjct: 448 DELTK-LLTFVLDLLKDYGLDDFYLELST----------------KNPQKFVGSDEVWEE 490 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + + A Y + + D++ ++S ++ F Sbjct: 491 ATRTLQEVAEASGLELRPDPEGAAFYGPKI---SVQARDAIGRTWQMSTIQLD----FNL 543 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 ++ L +A + V + G++ V+ + G W Sbjct: 544 PERFELEYTAA---DGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAW------LAPV 594 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 + + CE + +L V D+ ++ G + A P +IVG + Sbjct: 595 QVRLVPVADTFNAYCEDVAKQLRAENVRVEIDESDDRFGKKIRNAAKDKIPFTLIVGGED 654 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 V ++R + + + I + + + Sbjct: 655 AEHGAVSFRYRGGEQKNGVKISAAIQEITETIRSRK 690 >gi|126654116|ref|ZP_01725934.1| prolyl-tRNA synthetase [Bacillus sp. B14905] gi|126589396|gb|EAZ83546.1| prolyl-tRNA synthetase [Bacillus sp. B14905] Length = 568 Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats. Identities = 118/235 (50%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L+E P DAE+ SHK +LR G I Q++ G+YS+LPL ++ L + IIREE Sbjct: 1 MKQSKTFIPTLREVPADAEVKSHKQLLRAGFIRQNTSGVYSYLPLAKRVLSKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +IE+ +P+LQSA+LW ESGR++ YG E++RL DR+D+ GPTHEEV+T + R Sbjct: 61 MEAINSIELLMPSLQSAELWQESGRWEKYGPELMRLKDRHDRDFALGPTHEEVITTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF + E +Y+ M+ + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHASRESLDETYDDMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF RLGL + A++G IGG +HEF+VL++ GE + S D+ E Sbjct: 181 YSNIFSRLGLNYRAVIADAGSIGGKGTHEFMVLSEIGEDTIAYSDT-SDYAANIE 234 Score = 159 bits (403), Expect = 7e-37, Method: Composition-based stats. Identities = 70/187 (37%), Positives = 97/187 (51%), Gaps = 3/187 (1%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ + D P+ + GIEVGHIF GT YS M+ TF GK MG YG Sbjct: 383 DIRFIQEGDPSPDGQGTIKFAEGIEVGHIFKLGTTYSAKMNGTFLDEQGKSQPFIMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R++AAV E D G WP +AP+ I ++ + D+ +++Y L D Sbjct: 443 IGVSRILAAVAEHFQDENGFTWPTQLAPYDIHVVPVNTKDEAQVALADELYGLLKSYRYD 502 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G +FA ADL+G P++V VG K + VE+K R TG + EEVI++ Sbjct: 503 VLLDDRAERAGVKFADADLIGLPVRVTVGKKAIE-GIVEVKFRQTGETFEWKKEEVIDHL 561 Query: 439 SHRFSNN 445 + F N Sbjct: 562 NEFFRKN 568 >gi|169827162|ref|YP_001697320.1| prolyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41] gi|226701308|sp|B1HQZ9|SYP_LYSSC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|168991650|gb|ACA39190.1| Prolyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41] Length = 568 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 118/235 (50%), Positives = 162/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L+E P DAE+ SHK +LR G I Q++ G+YS+LPL ++ L + IIREE Sbjct: 1 MKQSKTFIPTLREVPADAEVKSHKQLLRAGFIRQNTSGVYSYLPLAKRVLSKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +IE+ +P+LQSA+LW ESGR++ YG E++RL DR+D+ GPTHEEV+T + R Sbjct: 61 MEAINSIELLMPSLQSAELWQESGRWEKYGPELMRLKDRHDRDFALGPTHEEVITTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF + E +Y+ M+ + Sbjct: 121 EIKSYKKLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHASRESLDETYDDMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF RLGL + A++G IGG +HEF+VL++ GE + S D+ E Sbjct: 181 YSNIFSRLGLNYRAVIADAGSIGGKGTHEFMVLSEIGEDTIAYSDT-SDYAANIE 234 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 71/187 (37%), Positives = 98/187 (52%), Gaps = 3/187 (1%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ + D P+ + GIEVGHIF GT YS M+ TF GK MG YG Sbjct: 383 DIRFIQEGDPSPDGQGTIKFAEGIEVGHIFKLGTTYSAKMNGTFLDEQGKSQPFIMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R++AAV E D G WP +AP+ I ++ + D+V +++Y L D Sbjct: 443 IGVSRILAAVAEHFQDENGFTWPTQLAPYDIHVVPVNTKDEVQVALADELYGLLKSYRYD 502 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G +FA ADL+G P++V VG K ++ VE+K R TG + EEVI+ Sbjct: 503 VLLDDRAERAGVKFADADLIGLPVRVTVGKK-ATEGIVEVKFRQTGETFEWKKEEVIDRL 561 Query: 439 SHRFSNN 445 + F N Sbjct: 562 NEFFRKN 568 >gi|166154796|ref|YP_001654914.1| threonyl-tRNA synthetase [Chlamydia trachomatis 434/Bu] gi|166155671|ref|YP_001653926.1| threonyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301336072|ref|ZP_07224316.1| threonyl-tRNA synthetase [Chlamydia trachomatis L2tet1] gi|238687393|sp|B0B8F5|SYT_CHLT2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238687442|sp|B0BA34|SYT_CHLTB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|165930784|emb|CAP04281.1| threonyl-tRNA synthetase [Chlamydia trachomatis 434/Bu] gi|165931659|emb|CAP07235.1| threonyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 635 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 72/445 (16%), Positives = 140/445 (31%), Gaps = 42/445 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++ + + RD + KL L + S G+ + P G + + + Sbjct: 223 LKEHLHQLEEAKKRDHRVLGTKLDLFSQ--QTCSAGMPFFHPRGMVVWNALVDYWKRLHQ 280 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 R G ++ P L + +LW SG +++Y + M L +++ P + +++ + Sbjct: 281 RAGYQQIQTPQLMNRELWEISGHWENYKENMYTLT-VDEEDYAIKPMNCPGCMLYYKTQL 339 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR P +I R EL G+MR R F DA+ LTPE + + Sbjct: 340 HSYREFPLRIAEIGHVHRHELSGALSGLMRVRTFHQDDAH-VFLTPEQVEEETLNILNLV 398 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ GL+ + + P E S D + + Sbjct: 399 SELYGTFGLEY-HLELSTRP----------------EQGTIGSDDLWELATEALKRALVK 441 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I A Y D+H K R + G I Sbjct: 442 SQKPFIISPGEGAFYGPKIDIHV----------KDAINRTWQCGTI-QLDMFLPERFDLK 490 Query: 302 FKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + A G+ M + R + +IE + Sbjct: 491 YTNAQGEKSTPIMLHRALFGSIERFLGILIEHFKGRFPLWLSPEHVRIITVA-------D 543 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +++ S++G V D E + + A + + +G K + + ++ Sbjct: 544 RHEARAQELAKHFSQMGIIVSVDSSNESVSKKIRNAQNMQVNYMITIGDKELETHLLAVR 603 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 R + D+++E+ + + Sbjct: 604 TRDNRVLNDIAVEQFSHVILEELRS 628 >gi|85716379|ref|ZP_01047351.1| threonyl-tRNA synthetase [Nitrobacter sp. Nb-311A] gi|85696736|gb|EAQ34622.1| threonyl-tRNA synthetase [Nitrobacter sp. Nb-311A] Length = 679 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 75/443 (16%), Positives = 136/443 (30%), Gaps = 39/443 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + G+ W G V A +R Sbjct: 257 YLKQIEEAEKRDHRKLGRELDLF--HFQEEGPGVVFWHAKGWTIFQAVIAYMRRRL-AED 313 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-----KAMIYGPTHEEVMTDIFRS 120 E++ P + LW SG ++ Y + M D + P + +F+ Sbjct: 314 YDEVNAPQMLDKALWETSGHWEWYRENMFAAQSAGDEAEDKRWFTIKPMNCPGHVQLFKH 373 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + + R E G+MR R F DA+ F + + + Sbjct: 374 GLKSYRDLPLRLAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEEQLADECLKINEL 433 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + ++ + P S A+ V + I +E Sbjct: 434 ILSTYADFGFDGELTVKLSTRPEKRVGSDAAWDHAEAVMADVLKRIAASNNRIKTE---- 489 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 I A Y + L D++ + + ++ FG Sbjct: 490 --------INPGEGAFYGPKFEY---VLRDAIGRDWQCGTTQVDFNLPERFG-------- 530 Query: 300 ATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + GK V + G++ ++ G +W V ++ + Sbjct: 531 AFYIDADGGKKAPVMVHRAICGSIERFIGILIEHFAGHFPLWLAPVQAVVTTITSDGD-- 588 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + + + + + G V D E+I + L P ++VG K V I Sbjct: 589 ----EYAKAVASAARRAGLRVELDLRNEKINYKVREHSLAKIPALLVVGKKEAETESVSI 644 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + ++ M E I Sbjct: 645 RRLGSDGQKVMPTGEAIAALVEE 667 >gi|187933014|ref|YP_001884453.1| prolyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B] gi|226699132|sp|B2TIF5|SYP_CLOBB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|187721167|gb|ACD22388.1| proline--tRNA ligase [Clostridium botulinum B str. Eklund 17B] Length = 570 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 130/310 (41%), Positives = 178/310 (57%), Gaps = 4/310 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+E P +AEI SHKLMLR+GMI + + GIY+++PLG KAL V IIREE Sbjct: 1 MKMSNMLISTLREVPAEAEIDSHKLMLRSGMIRKMASGIYNYMPLGLKALKKVEDIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E + A+LW SGR+D+YG EM R+ DRN++ GPTHEEV TDI ++ Sbjct: 61 MNEAGAQEFLASAMIPAELWQSSGRWDAYGAEMFRVKDRNERDFCLGPTHEEVFTDIAKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFGVMRSREF+MKDAYSFD +G SYNKM+ + Sbjct: 121 EIKSYKQLPVNLYQIQTKYRDERRPRFGVMRSREFVMKDAYSFDKDQQGLDLSYNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y++IF+R GL + + A+SG IGG S EF+V ++ GE + + ++ E Sbjct: 181 YVKIFNRCGLDAKCVEADSGAIGGSNSAEFMVKSEVGEDDIVFCTEC-NYAANIEKATAR 239 Query: 240 --DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + VE+ + P + D +E L S + + ++ + F Sbjct: 240 LEEAEKEELIEVEKVSTPDSRGIDEVSEFLNISSKKTVKTLLYNVDGKIVAVFVRGDREV 299 Query: 298 MSATFKGADG 307 A Sbjct: 300 NEVKVANASN 309 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 70/211 (33%), Positives = 106/211 (50%), Gaps = 4/211 (1%) Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKY 294 T ++ V D N ++ P K +RG EVGHIF GTKY Sbjct: 357 TGANETGYHIKNVNYGRDFEGTIGDYRNVVEGEACPTCGGKLTISRGTEVGHIFKLGTKY 416 Query: 295 SLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 S M A F +GK+ MG YGIG R +A++IE +D GI+WP +VAP+ +S+I + Sbjct: 417 SEAMDAKFIAENGKEAPFIMGCYGIGVTRTMASIIEQHNDENGIVWPLAVAPYHVSVIAV 476 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 D+ K+Y L +G + DD E+ G +F ++++G P+++ VG K + D Sbjct: 477 NVKDEEQVKIATKLYEDLKSMGVEALLDDRNERAGVKFKDSEIMGIPMRITVGKK-IVDG 535 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 +VE K R+ G E + +E+V F N Sbjct: 536 EVEFKLRI-GDMEVVKIEDVCQMVKGEFDKN 565 >gi|57506155|ref|ZP_00372076.1| threonyl-tRNA synthetase [Campylobacter upsaliensis RM3195] gi|57015550|gb|EAL52343.1| threonyl-tRNA synthetase [Campylobacter upsaliensis RM3195] Length = 602 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 77/440 (17%), Positives = 160/440 (36%), Gaps = 39/440 (8%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L I++E RD +L L T Q G+ WL G + + ++ + G Sbjct: 197 YLHIIEEARKRDHRKLGSELKLFT-FDEQIGGGLPIWLSNGTRLRSKLEQMLYKIHRLRG 255 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P L A+ W SG Y +Y + M + +++ P + I+++ ++SY Sbjct: 256 YEPVRGPELLKAEAWKISGHYANYKENM-YFTNIDEQEYGIKPMNCVGHIKIYQNDVRSY 314 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F++ + R E G+ R REF DA+ F + P K ++ Sbjct: 315 RDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCM-PSQIKEQVLEILDFV--- 370 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + E+ + T + + + + D+ Sbjct: 371 ---------------ASLMKIFDFEYEMEISTRPEKAIGDEAIWEVATKALKEALDEQGL 415 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + ++ F +++L + Sbjct: 416 KYGIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVD----FNLPERFALEYT---TS 465 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + K+ V + +G+ ++ + + I +V Sbjct: 466 ENTKERPVMLHRAILGSFERFIGILTEH------CAGEFPFFIAPIQVGIVPISEVHLAY 519 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + I L ++G D D E + + A+ P+ +++G + +S+ V ++ R Sbjct: 520 AKGIQRTLLEMGVDSEIYDKNESLSKKIRNAEKQKLPMILVIGDEELSNRAVALRDRRAK 579 Query: 425 IREDMSLEEVINYASHRFSN 444 ++ +SL+E +N + + Sbjct: 580 EQKSLSLDEFMNLIKEKINE 599 >gi|302411110|ref|XP_003003388.1| prolyl-tRNA synthetase [Verticillium albo-atrum VaMs.102] gi|261357293|gb|EEY19721.1| prolyl-tRNA synthetase [Verticillium albo-atrum VaMs.102] Length = 474 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 123/434 (28%), Positives = 205/434 (47%), Gaps = 33/434 (7%) Query: 23 HKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVE 82 H ++R G++ Q GI+ LP+G + + ++I + GA +++ ++ S LW + Sbjct: 57 HDKLIRAGLLRQSHSGIFHLLPMGYRIQSKLESLIDKYMQSLGASRVALSSITSKKLWQQ 116 Query: 83 SGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDE 142 SGRY+ G E+ DR + PTHEE +T + +KSY+ LP YQ K+RDE Sbjct: 117 SGRYEKLGSELFNFQDRRGADYMLAPTHEEEVTSLVAQSVKSYKELPLRLYQTTRKYRDE 176 Query: 143 LRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPI 202 LRPR G++R+REF MKD Y+FD+ + +Y ++ +Y F LGL + RA SG + Sbjct: 177 LRPRHGLLRTREFTMKDLYTFDVDTSAAIQTYEQVQGAYASFFGSLGLPVVKARAGSGDM 236 Query: 203 GGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDV 262 GGDLSHE+ + GE + + +F + S+ A A Sbjct: 237 GGDLSHEYHFTSPIGEDLIMKCNNC-EFAVNSD-----------------IAEQPANDSA 278 Query: 263 HNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF--------------KGADGK 308 + + +EVGH F+ GT+YS P+ A A Sbjct: 279 MDAQHCPKCEAGTLEVKEALEVGHTFHLGTRYSEPLGARIALPTTSQGDSQSADTSAARA 338 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 ++QMG +GIG R++ AV E D G+ WP +++P+++ ++ + + + Sbjct: 339 STHIQMGCHGIGVSRLIGAVAEHFADPVGLQWPRAISPYEVEIVFADGLEAQAVQIYDDV 398 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 L DV DD + + ADL G+P+ V++G + +E++ R GI+E Sbjct: 399 VHGL-SHTTDVLLDDRPVSLPWKLKDADLTGYPIVVVLGQVWKKTGNIELQCRRLGIKET 457 Query: 429 MSLEEVINYASHRF 442 + +++ S Sbjct: 458 VQPSDILQRISELL 471 >gi|299823039|ref|ZP_07054925.1| proline--tRNA ligase [Listeria grayi DSM 20601] gi|299816568|gb|EFI83806.1| proline--tRNA ligase [Listeria grayi DSM 20601] Length = 566 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 153/235 (65%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DAE+ +H+L+LR G I Q + G+YS+LPL L N+ IIREE Sbjct: 1 MRQSMTFIPTLKEVPADAEVKNHQLLLRAGFIRQTASGVYSYLPLATLTLRNIERIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P LQ A+LW ESGR+ YG E++RL DRN++ GPTHEEV+T + R Sbjct: 61 LNKVGASEILMPALQPAELWEESGRWADYGPELMRLKDRNNRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF E +Y M+ + Sbjct: 121 EIKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHADLESLDKTYQDMYTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL + A+SG IGG + EF+ L+ GE + S D+ E Sbjct: 181 YSNIFTRCGLDFRAVIADSGSIGGKETKEFMALSAIGEDTIAYSDT-SDYAANIE 234 Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats. Identities = 66/180 (36%), Positives = 102/180 (56%), Gaps = 3/180 (1%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ + D P+ + V GIEVGHIF GTKYS M A F +G+ + + MG YG Sbjct: 383 DLRMIQEGDLSPDGEGVIRFAEGIEVGHIFKLGTKYSDAMKANFLDENGRANPIIMGCYG 442 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG RV++A+ E + D G++W ++PF + LI + ++ E++Y L + G Sbjct: 443 IGVSRVLSAIAEQNADENGLVWDREISPFDLHLIPVNMKNEEQASFAEELYVSLQESGFT 502 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V +DD E+ G +FA ADL+G P+++ VG K + VE+K R TG ++ EE++N Sbjct: 503 VLFDDRAERAGVKFADADLIGLPIRITVGKK-ADEGIVEVKIRKTGEMIEVKKEELLNTL 561 >gi|238926724|ref|ZP_04658484.1| proline--tRNA ligase [Selenomonas flueggei ATCC 43531] gi|238885256|gb|EEQ48894.1| proline--tRNA ligase [Selenomonas flueggei ATCC 43531] Length = 570 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 117/286 (40%), Positives = 165/286 (57%), Gaps = 2/286 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + + P L+ P +AEIASH+LM R G+I + + G+Y++LPL + + + IIREE Sbjct: 1 MRATNLYAPTLRNTPAEAEIASHQLMYRAGLIRKSAGGMYTYLPLAWRTIRKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P LQ ++LW ESGR+ +YG EM+R+ DR+ + GPTHEE++T + R Sbjct: 61 MDAAGGQEIMMPILQPSELWEESGRWGAYGAEMIRVKDRHGREFCMGPTHEEMITALVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ KFRDE RPRFGVMRSREF+MKD YSFD G SY KM V+ Sbjct: 121 EVRSYKQLPLMLYQIQDKFRDERRPRFGVMRSREFIMKDLYSFDKDIAGMNESYRKMSVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP--IPSENTD 238 Y IF R GL + A+SG IGG S EF VLA GE+++ C + Sbjct: 181 YTNIFTRCGLNFRAVEADSGAIGGGHSEEFTVLAPEGESRIACCDACSYAASDEKAALRP 240 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 + + + P+ +T + E L + + + A E Sbjct: 241 INAPDEAELPLAKVATPHTSTIALLAEYLKIPVEKTIKAVAYQTED 286 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 64/188 (34%), Positives = 100/188 (53%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLP---ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ + D+ P RGIE G IF GTKYS M ATF GK +QMG Sbjct: 381 VADIRLVEEGDACPVCENGHLHIGRGIEAGQIFALGTKYSKAMGATFLDEAGKTQPLQMG 440 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R +AA IE +HD GIIWP ++AP+++ ++ + A + E++Y L Sbjct: 441 CYGIGVGRTMAAAIEQNHDEHGIIWPRAIAPYEVVVVAVNAKAEEQLAYAEEVYEELRAA 500 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G +F DL+G+P+++ +G K + + +E+K R +G + + + + Sbjct: 501 GVDVLLDDRRERAGVKFNDCDLIGYPVRIAIGPKTIENGTIEVKIRKSGALVNFARDTYL 560 Query: 436 NYASHRFS 443 + Sbjct: 561 KGVQDMLA 568 >gi|169823842|ref|YP_001691453.1| prolyl-tRNA synthetase [Finegoldia magna ATCC 29328] gi|226701290|sp|B0RZJ0|SYP_FINM2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|167830647|dbj|BAG07563.1| prolyl-tRNA synthetase [Finegoldia magna ATCC 29328] Length = 576 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 115/240 (47%), Positives = 161/240 (67%), Gaps = 1/240 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K+++P L+E+P+DAEIASHKL+LR GMI + + G+YS+LPLG + + V I+REE Sbjct: 1 MRMNKFYMPTLREDPQDAEIASHKLLLRAGMIRKTAAGLYSYLPLGYRIVRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G+ E+ +P Q ++W ESGR+ ++G EM +L DRN++ GPT EE TD+ + Sbjct: 61 MDNYGSQEIHMPITQPREIWEESGRWKTFGPEMFKLKDRNNREFCLGPTAEEYFTDLVKG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFG+ RSREFLM+DAY+FD+ E +Y M+ + Sbjct: 121 EIKSYKQLPLNIYQIQTKYRDEKRPRFGINRSREFLMQDAYTFDVNEEAMGEAYMNMWRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F+RLGL+ + +SG +GG+ SHEFI L+D GE V C D DF E Sbjct: 181 YEVVFNRLGLEYKIVAGDSGAMGGNSSHEFIALSDVGEG-VICYSDDSDFAATDEKAYVY 239 Score = 153 bits (386), Expect = 6e-35, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 103/199 (51%), Gaps = 1/199 (0%) Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 + + + + E D ++ RGIEVG+IF G KYS M+ATF + Sbjct: 370 NYGDDFEGEIVEDLLMVQEGDIDPETKSPLKFKRGIEVGNIFQLGQKYSKSMNATFLDEN 429 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 GK+ + MGSYGIG R V+A++E +HD KG+IWP VAP+ + + + D+ E Sbjct: 430 GKEQFFWMGSYGIGVTRSVSAIVEQNHDDKGMIWPLVVAPYHVIITIVNTKDEEQNTLAE 489 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+Y +L G +V DD E++G +F DL+G PL++ VG K D VE R T Sbjct: 490 KLYEKLLLQGVEVLLDDRKERVGVKFNDRDLIGIPLRITVGKKAAED-IVEFSERRTLEN 548 Query: 427 EDMSLEEVINYASHRFSNN 445 +MS E ++N Sbjct: 549 VEMSSTEAYEKVMEIINSN 567 >gi|113475053|ref|YP_721114.1| prolyl-tRNA synthetase [Trichodesmium erythraeum IMS101] gi|123161090|sp|Q116D3|SYP_TRIEI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|110166101|gb|ABG50641.1| prolyl-tRNA synthetase [Trichodesmium erythraeum IMS101] Length = 601 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 119/276 (43%), Positives = 164/276 (59%), Gaps = 7/276 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L+++P +AEI SHKL++R G I + GIY++LPL + ++ V+ I+REE Sbjct: 1 MRLSQMLLVTLRDDPAEAEIPSHKLLIRAGYIRRIGNGIYAYLPLMLRVINKVSTIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N TGA E +P LQ A+LW ESGR+D+Y + M L DR ++ + GPTHEEV+T I Sbjct: 61 MNATGAQECLLPQLQPAELWQESGRWDTYTQAEGIMFSLIDRQNRELGLGPTHEEVITTI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + I+SYR LP YQ+Q KFRDE+RPRFG+MR REF+MKD YSF E K +Y M Sbjct: 121 AKDIIRSYRQLPIHLYQLQTKFRDEIRPRFGLMRGREFIMKDGYSFHADEESLKKTYQDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y + R GL+ + A+SG IGG S EF+VLAD GE ++ ++D + E Sbjct: 181 DKAYRNMLRRSGLQFRAVDADSGAIGGSASQEFMVLADAGEDEILYTQDG-KYAANMEKA 239 Query: 238 ---DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 D S ++ P T + E L S Sbjct: 240 ISLPVDVEASPFDTYDKLETPGTETIEKMCEFLHCS 275 Score = 162 bits (411), Expect = 7e-38, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 102/200 (51%), Gaps = 3/200 (1%) Query: 247 SIVEQWTAPYAATSDVHNEKLFDSL--PENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + +++ P +K ++ P +ARGIEVGHIF GTKYS M AT+ Sbjct: 400 NWGQEFALPKLVVDVRKAKKGDRAVHDPSKTLETARGIEVGHIFQLGTKYSEAMGATYTN 459 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 G++ + MG YG+G R+ A +E S+D GIIWP ++AP+ + + D + Sbjct: 460 EQGQEVPLLMGCYGVGVSRLAQAAVEQSYDKDGIIWPVAIAPYHVVICIPNIKDTQQIEV 519 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +Y L++ G D DD E+ G +F ADL+G P +++ G + + KVE+ R T Sbjct: 520 AGNLYKELNEAGIDTILDDRDERAGVKFKDADLIGIPYRIVTG-RSLKSGKVELIERSTH 578 Query: 425 IREDMSLEEVINYASHRFSN 444 +++ + +V++ Sbjct: 579 QCQEIVVAQVLSTLKDLIEK 598 >gi|303234780|ref|ZP_07321406.1| proline--tRNA ligase [Finegoldia magna BVS033A4] gi|302494121|gb|EFL53901.1| proline--tRNA ligase [Finegoldia magna BVS033A4] Length = 576 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 115/240 (47%), Positives = 161/240 (67%), Gaps = 1/240 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K+++P L+E+P+DAEIASHKL+LR GMI + + G+YS+LPLG + + V I+REE Sbjct: 1 MRMNKFYMPTLREDPQDAEIASHKLLLRAGMIRKTAAGLYSYLPLGYRIVRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G+ E+ +P Q ++W ESGR+ ++G EM +L DRN++ GPT EE TD+ + Sbjct: 61 MDNYGSQEIHMPVTQPREIWEESGRWKTFGPEMFKLKDRNNREFCLGPTAEEYFTDLVKG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFG+ RSREFLM+DAY+FD+ E +Y M+ + Sbjct: 121 EIKSYKQLPLNIYQIQTKYRDEKRPRFGINRSREFLMQDAYTFDVNEEAMGEAYMNMWRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F+RLGL+ + +SG +GG+ SHEFI L+D GE V C D DF E Sbjct: 181 YEVVFNRLGLEYKIVAGDSGAMGGNSSHEFIALSDVGEG-VICYSDDSDFAATDEKAYVY 239 Score = 153 bits (386), Expect = 6e-35, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 103/199 (51%), Gaps = 1/199 (0%) Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 + + + + E D ++ RGIEVG+IF G KYS M+ATF + Sbjct: 370 NYGDDFEGEIVEDLLMVQEGDIDPETKSPLKFKRGIEVGNIFQLGQKYSKSMNATFLDEN 429 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 GK+ + MGSYGIG R V+A++E +HD KG+IWP VAP+ + + + D+ E Sbjct: 430 GKEQFFWMGSYGIGVTRSVSAIVEQNHDDKGMIWPLVVAPYHVIITIVNTKDEEQNTLAE 489 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+Y +L G +V DD E++G +F DL+G PL++ VG K D VE R T Sbjct: 490 KLYEKLLLQGVEVLLDDRKERVGVKFNDRDLIGIPLRITVGKKAAED-IVEFSERRTLEN 548 Query: 427 EDMSLEEVINYASHRFSNN 445 +MS E ++N Sbjct: 549 VEMSSTEAYEKVMEIINSN 567 >gi|89071308|ref|ZP_01158467.1| threonyl-tRNA synthetase [Oceanicola granulosus HTCC2516] gi|89043173|gb|EAR49409.1| threonyl-tRNA synthetase [Oceanicola granulosus HTCC2516] Length = 654 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 78/445 (17%), Positives = 139/445 (31%), Gaps = 45/445 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L L+E RD ++ L + + G W P G + +R +Q Sbjct: 238 KAHLHRLEEAQKRDHRKLGREMDLF--HMQAEAPGQVFWHPNGWTVYTTLQDYMRRKQRA 295 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIY-----GPTHEEVMTDIF 118 G E++ P + LW SG +D Y M + + A P + +F Sbjct: 296 GGYREINTPQVVDRKLWEASGHWDKYQDHMFIVEVDEEHAQEKAINALKPMNCPCHVQVF 355 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F DA+ F T + + + Sbjct: 356 NQGLKSYRDLPLRLAEFGSCSRYEPSGALHGIMRVRGFTQDDAHIFC-TEDQIEAECARF 414 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 I+ LG + ++ + P S D + + Sbjct: 415 INFLAGIYEDLGFPTFEIKFATRPEKR-----------------VGSDASWDHVENALES 457 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 ++ A Y D + L D++ + ++ G Sbjct: 458 AIRATGRTYTLEPGDGAFYGPKLDFY---LTDAIGRTWQCGTFQVDPNLPERLG------ 508 Query: 298 MSATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 AT+ G DG H + +G+ ++ H GK W S++ Sbjct: 509 --ATYIGEDGAKHRPYMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASIV---- 562 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 ++ L G D E+I + + P+ + G + V + V Sbjct: 563 --SDADGYVHEVVDALQAAGVRAEADTRNEKINFKVREHSVGKVPVILACGGREVEERTV 620 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ L+ ++ S Sbjct: 621 SVRRLGDKATRTAGLDALVGELSAE 645 >gi|306818771|ref|ZP_07452493.1| threonine--tRNA ligase [Mobiluncus mulieris ATCC 35239] gi|304648457|gb|EFM45760.1| threonine--tRNA ligase [Mobiluncus mulieris ATCC 35239] Length = 692 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 65/456 (14%), Positives = 138/456 (30%), Gaps = 48/456 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K ++ L+E RD +L L + + G+ + P G + R+ Sbjct: 269 KAYVTRLEEAEKRDHRRLGTELDLFS-FPEEIGSGLPVFHPKGALVRMEMENYSRQRHLE 327 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHE 111 G +S P + L+ SG Y + M + P + Sbjct: 328 EGYSFVSTPHVTKGQLFETSGHLSWYKEGMFPAMHLDEERDAQGNVTKEGADYYLKPMNC 387 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF+S +SYR LP ++ +R E G+ R+R F D++ + + Sbjct: 388 PMHNLIFKSRTRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDSHIYCTRDQMK 447 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L + GL + + + S + + Sbjct: 448 DELTK-LLTFVLDLLKDYGLDDFYLELST----------------KNPQKFVGSDEVWEE 490 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + + A Y + + D++ ++S ++ F Sbjct: 491 ATRTLQEVAEASGLELRPDPEGAAFYGPKI---SVQARDAIGRTWQMSTIQLD----FNL 543 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 ++ L +A + V + G++ V+ + G W Sbjct: 544 PERFELEYTAA---DGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAW------LAPV 594 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 + + CE + +L V D+ ++ G + A P +IVG + Sbjct: 595 QVRLVPVADTFNAYCEDVAKQLRAENVRVEIDESDDRFGKKIRNAAKDKVPFTLIVGGED 654 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 V ++R + + + I + + + Sbjct: 655 AEHGAVSFRYRGGEQKNGVKISAAIQEITETIRSRK 690 >gi|160894708|ref|ZP_02075483.1| hypothetical protein CLOL250_02259 [Clostridium sp. L2-50] gi|156863642|gb|EDO57073.1| hypothetical protein CLOL250_02259 [Clostridium sp. L2-50] Length = 591 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 73/434 (16%), Positives = 150/434 (34%), Gaps = 33/434 (7%) Query: 16 RDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD ++ L M +G+ +LP G + I+ ++ + G + P + Sbjct: 181 RDHRKIGKEMNLF--MSDDLVGRGLPMFLPKGYIVWQELENYIKNKERKLGYRHVMTPCV 238 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQ 134 + +L+ SG +D Y M + ++ + P + I+ + + SY++LP + Sbjct: 239 GTVNLYKTSGHWDHYKDNMFPAMEVEGESFVLRPMNCPHHMMIYANKMHSYKDLPIRIGE 298 Query: 135 IQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSI 193 I FR E G+ R R F DA+ +TPE + + ++ + + Sbjct: 299 IAHDFRFEASGTLKGIERGRHFCQNDAH-LFVTPEQIESEFKQVVDLIFDTYKDFNITDY 357 Query: 194 PMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT 253 + + D E + + DDI + Sbjct: 358 RCVLSLRD-----PEDKVKYHDDDEM--------WNTAEDALRKVLDDIGIEYTEEIGEA 404 Query: 254 APYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 A Y DV + ++ +S ++ F K+ + T+ DG Sbjct: 405 AFYGPKLDV---NVKPAIGNEYTLSTCQLD----FCLPAKF----NLTYIDKDGTKKTPV 453 Query: 314 M-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 + +G++ A I + P +AP + ++ +K D+ ++Y L Sbjct: 454 VLHRAILGSLDRFMAYIL---EETKGNLPLWLAPVQARILPVKNEDEELNAYAHELYDFL 510 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 V D+ E++G + A + P +I+G V+D V + + ++ Sbjct: 511 DDNNIRVEIDERAEKLGYRVRAAQVEKVPYLIILGKNEVNDKTVSYRLHGEQKTTTVPMD 570 Query: 433 EVINYASHRFSNNR 446 E + + Sbjct: 571 EFLAMLQDEIKTKK 584 >gi|328876049|gb|EGG24413.1| threonyl-tRNA synthetase [Dictyostelium fasciculatum] Length = 786 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 75/440 (17%), Positives = 151/440 (34%), Gaps = 41/440 (9%) Query: 17 DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS 76 D + L H +S G +LP G K + + + +R E R G E+ P + S Sbjct: 378 DHRNIGREQELF--FFHPYSPGSCFFLPHGAKVYNKLLSFLRGEYRRRGYQEVITPNIYS 435 Query: 77 ADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 LW SG + +Y M + P + ++ ++SY+ LP + Sbjct: 436 QKLWEVSGHWQNYKDNMFSFQ-CDHTTYSLKPMNCPGHCLMYAHRVRSYKELPMRYADFG 494 Query: 137 LKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 + R+E G+ R R F DA+ F T + + + +L+ +R+ + + Sbjct: 495 VLHRNETHGSLTGLTRVRRFQQDDAHIFCRTDQIEEEMRACL--DFLQYVYRVFGFTFSL 552 Query: 196 RAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD-IISLNSIVEQWTA 254 + P G D + + ++ + E A Sbjct: 553 ELSTRPKEG----------------YLGDLDTWNRAENALEQVLNESFRGHWRLNEGDGA 596 Query: 255 PYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG-----ADGKD 309 Y D+H + D+ + + + ++ F +++ A + Sbjct: 597 FYGPKIDIH---IKDANGRSHQCATIQLDFQLPQRFNLEFTTSGVAETDDPSALAPSKFE 653 Query: 310 HYVQMGSYGIG-AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 V + G R++A +IE + + EKI Sbjct: 654 RPVMIHRAIFGSTERMLAILIEHTKGKWPFWLSPRQVLVTSIG-------DAHNEYAEKI 706 Query: 369 YARLSKVGCDVFWDDMGEQ-IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR- 426 L G +V D + I + A +L + ++VG++ V+++ V ++ R Sbjct: 707 RQDLHLAGYEVDIDTSAHKTIKKKLRDAIILKYNYVIVVGNEEVTNNTVSVRRRDGDSTP 766 Query: 427 EDMSLEEVINYASHRFSNNR 446 + MSL +++ + N + Sbjct: 767 QSMSLSSLLDELQIKTDNYQ 786 >gi|295093898|emb|CBK82989.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Coprococcus sp. ART55/1] Length = 587 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 69/435 (15%), Positives = 147/435 (33%), Gaps = 33/435 (7%) Query: 13 ENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 RD + L M+ +G+ +LP G + I+ ++ + G + + Sbjct: 179 AKERDHRKIGKDMQLF--MVDDLVGRGLPMFLPKGYTVWQELENYIKRKERKLGYLHVMT 236 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + + +L+ SG +D Y M + ++ + P + I+ + + SY++LP Sbjct: 237 PCVGTVNLYKTSGHWDHYKDNMFPAMEMEGESFVLRPMNCPHHMMIYANKMHSYKDLPIR 296 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 +I FR E G+ R R F D++ F TP+ + + + + G+ Sbjct: 297 IAEIAHDFRFEASGTLKGIERGRHFCQNDSHIFV-TPDQIEEEFAGVVKLIFDTYKDFGI 355 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + + D E + + DDI + Sbjct: 356 TDYRCVLSLRD-----PEDKVKYHDDDEM--------WNKAENALRKVLDDIGIDYTEEI 402 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y DV + ++ +S ++ F K+ + DG+ Sbjct: 403 GEAAFYGPKLDV---NVKPAVGNEYTLSTCQLD----FCLPAKFD----LKYIDKDGEKK 451 Query: 311 YVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + +G++ A I + P +AP ++ ++ +K ++ K+ Sbjct: 452 TPVVLHRAILGSLDRFMAYIL---EETKGNLPTWLAPVQVRVMPVKTDNEDLMAYAHKVV 508 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 L + V DD E++G + + P +++G + V + + Sbjct: 509 DALDAIDVRVELDDRAEKLGYRMREGQVQKVPYLLVIGFNEAENGTVSYRLHGEADTTVL 568 Query: 430 SLEEVINYASHRFSN 444 L+E + Sbjct: 569 PLDEFVQRIDTEIKT 583 >gi|163814284|ref|ZP_02205673.1| hypothetical protein COPEUT_00435 [Coprococcus eutactus ATCC 27759] gi|158449919|gb|EDP26914.1| hypothetical protein COPEUT_00435 [Coprococcus eutactus ATCC 27759] Length = 587 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 69/435 (15%), Positives = 147/435 (33%), Gaps = 33/435 (7%) Query: 13 ENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 RD + L M+ +G+ +LP G + I+ ++ + G + + Sbjct: 179 AKERDHRKIGKDMQLF--MVDDLVGRGLPMFLPKGYTVWQELENYIKRKERKLGYLHVMT 236 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + + +L+ SG +D Y M + ++ + P + I+ + + SY++LP Sbjct: 237 PCVGTVNLYKTSGHWDHYKDNMFPAMEMEGESFVLRPMNCPHHMMIYANKMHSYKDLPIR 296 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 +I FR E G+ R R F D++ F TP+ + + + + G+ Sbjct: 297 IAEIAHDFRFEASGTLKGIERGRHFCQNDSHIFV-TPDQIEEEFAGVVKLIFDTYKDFGI 355 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + + D E + + DDI + Sbjct: 356 TDYRCVLSLRD-----PEDKVKYHDDDEM--------WNKAENALRRVLDDIGIDYTEEI 402 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y DV + ++ +S ++ F K+ + DG+ Sbjct: 403 GEAAFYGPKLDV---NVKPAVGNEYTLSTCQLD----FCLPAKFD----LKYIDKDGEKK 451 Query: 311 YVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + +G++ A I + P +AP ++ ++ +K ++ K+ Sbjct: 452 TPVVLHRAILGSLDRFMAYIL---EETKGNLPTWLAPVQVRVMPVKTDNEDLMAYAHKVV 508 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 L + V DD E++G + + P +++G + V + + Sbjct: 509 DALDAIDVRVELDDRAEKLGYRMREGQVQKVPYLLVIGFNEAENGTVSYRLHGEADTTVL 568 Query: 430 SLEEVINYASHRFSN 444 L+E + Sbjct: 569 PLDEFVQKIDTEIKT 583 >gi|297748711|gb|ADI51257.1| Threonyl-tRNA synthetase [Chlamydia trachomatis D-EC] gi|297749591|gb|ADI52269.1| Threonyl-tRNA synthetase [Chlamydia trachomatis D-LC] Length = 660 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 72/445 (16%), Positives = 140/445 (31%), Gaps = 42/445 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++ + + RD + KL L + S G+ + P G + + + Sbjct: 248 LKEHLHQLEEAKKRDHRVLGTKLDLFSQ--QTCSAGMPFFHPRGMVVWNALVDYWKRLHQ 305 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 R G ++ P L + +LW SG +++Y + M L +++ P + +++ + Sbjct: 306 RAGYQQIQTPQLMNRELWEISGHWENYKENMYTLT-VDEEDYAIKPMNCPGCMLYYKTQL 364 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR P +I R EL G+MR R F DA+ LTPE + + Sbjct: 365 HSYREFPLRIAEIGHVHRHELSGALSGLMRVRTFHQDDAH-VFLTPEQVEEETLNILNLV 423 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ GL+ + + P E S D + + Sbjct: 424 SELYGTFGLEY-HLELSTRP----------------EQGTIGSDDLWELATKALKRALVK 466 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I A Y D+H K R + G I Sbjct: 467 SQKPFIISPGEGAFYGPKIDIHV----------KDAINRTWQCGTI-QLDMFLPERFDLK 515 Query: 302 FKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + A G+ M + R + +IE + Sbjct: 516 YTNAQGEKSTPIMLHRALFGSIERFLGILIEHFKGRFPLWLSPEHVRIITVA-------D 568 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +++ S++G V D E + + A + + +G K + + ++ Sbjct: 569 RHEARAQELAKHFSQMGIIVSVDSSNESVSKKIRNAQNMQVNYMITIGDKELETHLLAVR 628 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 R + D+++E+ + + Sbjct: 629 TRDNRVLNDIAVEQFSHVILEELRS 653 >gi|302518003|ref|ZP_07270345.1| threonyl-tRNA synthetase [Streptomyces sp. SPB78] gi|302426898|gb|EFK98713.1| threonyl-tRNA synthetase [Streptomyces sp. SPB78] Length = 658 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 69/439 (15%), Positives = 134/439 (30%), Gaps = 36/439 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD ++L L + + G+ + P G + R G + Sbjct: 254 EAEKRDHRKLGNELDLFS-FPEEVGPGLAVFHPKGGIIRRAMEDYSRRRHEEEGYEFVYS 312 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P L+ +SG D Y M P + + IF + +SYR LP Sbjct: 313 PHTTKGALFQKSGHLDWYADGMYPPMQLDEGVDYYLKPMNCPMHNLIFDARGRSYRELPL 372 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 ++ +R E G+ RSR F DA+ + + ++ +K L + G Sbjct: 373 RLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQMAEEL-DKTLTFVLNLLRDYG 431 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 L + + E + S + + + + Sbjct: 432 LDDFYLELST----------------KDEKKFVGSDEVWEEATATLQQVAEKQGLPLVPD 475 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y + + D++ ++S ++ F ++ L +A + Sbjct: 476 PGGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FNLPERFDLSYTAA---DGSRQ 525 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + G++ AV+ + P +AP + I + ++ Sbjct: 526 RPVMIHRALFGSIERFFAVLL---EHYAGAMPPWLAPVQAVGIPVG---DAHVPYLKEFA 579 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 A + G V D +++ + P VIVG ++ V +HR + Sbjct: 580 AEARRKGLRVDVDASSDRMQKKIRNHQKQKTPFMVIVGDDDMNAGTVSFRHRDGSQENGI 639 Query: 430 SLEEVINYASHRFSNNRPV 448 +E I V Sbjct: 640 PKDEAIAKLLDVVERRVQV 658 >gi|188587611|ref|YP_001919651.1| prolyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43] gi|226699131|sp|B2UY89|SYP_CLOBA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|188497892|gb|ACD51028.1| prolyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43] Length = 570 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 122/237 (51%), Positives = 159/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+E P +AEI SHKLMLR+GMI + + GIY+++PLG KAL V IIREE Sbjct: 1 MKMSNMLISTLREVPAEAEIDSHKLMLRSGMIRKMASGIYNYMPLGLKALKKVEDIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E + A+LW SGR+D+YG EM R+ DRN++ GPTHEEV TDI ++ Sbjct: 61 MNEAGAQEFLASAMIPAELWQSSGRWDAYGAEMFRVKDRNERDFCLGPTHEEVFTDIAKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFGVMRSREF+MKDAYSFD +G SYNKM+ + Sbjct: 121 EIKSYKQLPVNLYQIQTKYRDERRPRFGVMRSREFVMKDAYSFDKDQQGLDLSYNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y++IF+R GL + + A+SG IGG S EF+V ++ GE + + D+ E Sbjct: 181 YVKIFNRCGLDAKCVEADSGAIGGSNSAEFMVKSEVGEDDIVFCTEC-DYAANIEKA 236 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 70/211 (33%), Positives = 105/211 (49%), Gaps = 4/211 (1%) Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL--PENKRVSARGIEVGHIFYFGTKY 294 T ++ V D N ++ K +RG EVGHIF GTKY Sbjct: 357 TGANETGYHIKNVNYGRDFEGIIGDYRNVVEGEACSICGGKLTISRGTEVGHIFKLGTKY 416 Query: 295 SLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 S M A F +GK+ MG YGIG R +A++IE +D GI+WP +VAP+ +S+I + Sbjct: 417 SEAMDAKFIAENGKEAPFIMGCYGIGVTRTMASIIEQHNDESGIVWPLAVAPYHVSVIAV 476 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 D+ K+Y L +G + DD E+ G +F ++++G P+++ VG K + D Sbjct: 477 NVKDEEQVKIATKLYEDLKSIGVEALLDDRNERAGVKFKDSEIMGIPMRITVGKK-IVDG 535 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 +VE K R TG E + +E+V F N Sbjct: 536 EVEFKLR-TGDMEVVKIEDVCQIVKGEFDKN 565 >gi|15605310|ref|NP_220096.1| threonyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX] gi|76789318|ref|YP_328404.1| threonyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13] gi|237803010|ref|YP_002888204.1| threonyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT] gi|237804932|ref|YP_002889086.1| threonyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT] gi|255311401|ref|ZP_05353971.1| threonyl-tRNA synthetase [Chlamydia trachomatis 6276] gi|255317702|ref|ZP_05358948.1| threonyl-tRNA synthetase [Chlamydia trachomatis 6276s] gi|255348963|ref|ZP_05380970.1| threonyl-tRNA synthetase [Chlamydia trachomatis 70] gi|255503502|ref|ZP_05381892.1| threonyl-tRNA synthetase [Chlamydia trachomatis 70s] gi|7388284|sp|O84585|SYT_CHLTR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123731247|sp|Q3KLB6|SYT_CHLTA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|6578108|gb|AAC68183.2| Threonyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX] gi|76167848|gb|AAX50856.1| threonyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13] gi|231273232|emb|CAX10145.1| threonyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT] gi|231274244|emb|CAX11038.1| threonyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT] gi|296436115|gb|ADH18289.1| threonyl-tRNA synthetase [Chlamydia trachomatis G/9768] gi|296437044|gb|ADH19214.1| threonyl-tRNA synthetase [Chlamydia trachomatis G/11222] gi|296437975|gb|ADH20136.1| threonyl-tRNA synthetase [Chlamydia trachomatis G/11074] gi|297140477|gb|ADH97235.1| threonyl-tRNA synthetase [Chlamydia trachomatis G/9301] Length = 635 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 72/445 (16%), Positives = 140/445 (31%), Gaps = 42/445 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++ + + RD + KL L + S G+ + P G + + + Sbjct: 223 LKEHLHQLEEAKKRDHRVLGTKLDLFSQ--QTCSAGMPFFHPRGMVVWNALVDYWKRLHQ 280 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 R G ++ P L + +LW SG +++Y + M L +++ P + +++ + Sbjct: 281 RAGYQQIQTPQLMNRELWEISGHWENYKENMYTLT-VDEEDYAIKPMNCPGCMLYYKTQL 339 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR P +I R EL G+MR R F DA+ LTPE + + Sbjct: 340 HSYREFPLRIAEIGHVHRHELSGALSGLMRVRTFHQDDAH-VFLTPEQVEEETLNILNLV 398 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ GL+ + + P E S D + + Sbjct: 399 SELYGTFGLEY-HLELSTRP----------------EQGTIGSDDLWELATKALKRALVK 441 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I A Y D+H K R + G I Sbjct: 442 SQKPFIISPGEGAFYGPKIDIHV----------KDAINRTWQCGTI-QLDMFLPERFDLK 490 Query: 302 FKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + A G+ M + R + +IE + Sbjct: 491 YTNAQGEKSTPIMLHRALFGSIERFLGILIEHFKGRFPLWLSPEHVRIITVA-------D 543 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +++ S++G V D E + + A + + +G K + + ++ Sbjct: 544 RHEARAQELAKHFSQMGIIVSVDSSNESVSKKIRNAQNMQVNYMITIGDKELETHLLAVR 603 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 R + D+++E+ + + Sbjct: 604 TRDNRVLNDIAVEQFSHVILEELRS 628 >gi|330685674|gb|EGG97315.1| proline--tRNA ligase [Staphylococcus epidermidis VCU121] Length = 567 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 127/371 (34%), Positives = 198/371 (53%), Gaps = 6/371 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P ++E P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N++ IIREE Sbjct: 1 MKQSKVFIPTMREVPAEAEALSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNISKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T + R Sbjct: 61 MEKVDAVEILMPALQQAELWEESGRWGAYGPELMRLKDRNGREFALGPTHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKRLPLTLFQIQSKFRDEQRPRFGLLRGREFIMKDAYSFHADEASLDETYQDMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+G+ + P+ A+SG IGG+ +HEF+ L++ GE + + D+ E + Sbjct: 181 YDRIFKRVGINARPVVADSGAIGGNHTHEFMALSEIGEDTIVY-SNESDYAANIEKAEVV 239 Query: 241 DIISLNSI----VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + + +++ P T++ + L L E + ++ I + Sbjct: 240 YTANPKNTEVAELKKIETPNIKTAEEVAKYLKRPLDEIVKTMICKVDGEFIMVLIRGHHE 299 Query: 297 PMSATFKGADGKDHYVQMGS-YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 K G D I + + HD I+ D+ + + Sbjct: 300 LNDVKLKAYFGTDQIEMANQDEIINIVGAHPGSLGPIHDKDIKIYADNFVQDLNNFVIGA 359 Query: 356 AHDQVCRDACE 366 D + + Sbjct: 360 NEDGYHFENAQ 370 Score = 156 bits (394), Expect = 7e-36, Method: Composition-based stats. Identities = 67/161 (41%), Positives = 97/161 (60%), Gaps = 2/161 (1%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E HD GIIW Sbjct: 404 GIEVGQVFKLGTKYSETMNATFLDNQGKAQPLIMGCYGIGVSRTLSAIVEQHHDDNGIIW 463 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P SV PF + LI I + R+ ++Y +L DV +DD E+ G +F ADL+G Sbjct: 464 PKSVTPFDLHLITINPKKEDQRELGNQLYDQLM-NNYDVLYDDRQERAGVKFNDADLIGL 522 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 P++V+VG + + VE+K R TG E++ ++++ NY + Sbjct: 523 PIRVVVGKR-AEEGIVEVKQRSTGESEEIHIDDLENYINDL 562 >gi|328553230|gb|AEB23722.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens TA208] Length = 638 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 74/441 (16%), Positives = 154/441 (34%), Gaps = 41/441 (9%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 +L+E R+ +L L M + + G+ +LP GQ + + + +R +Q+ Sbjct: 234 FQLLKEAEKRNHRKLGAELQLF--MFSEEAPGMPFYLPNGQFIRNTLESFLRSKQDAYHY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + + LW +SG +D Y + M ++ + + P + IF+ ++SYR Sbjct: 292 QEVRTPMMMNQRLWEQSGHWDHYKENM-YFSEADQQRFALKPMNCPGHMLIFKERLRSYR 350 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP + R E G++R R F DA+ F TP+ + ++ Sbjct: 351 ELPIRMAEFGQVHRHEFSGALNGLLRVRSFCQDDAHIFV-TPDQIESEIASALQLIHEVY 409 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G + P S+ D + + Sbjct: 410 TAFGFSYDI-ELSTRP-----------------EDYMGSERLWDRAESALERVLKEQGYD 451 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 A Y D+H + D+L + + + ++ F K+ T+ Sbjct: 452 FRFNRGDGAFYGPKIDIH---IKDALNRSHQCATVQLD----FQMPEKFD----LTYIDE 500 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + V + G++ +I + G +W + I + V RD Sbjct: 501 KNQKVRPVVIHRAVFGSLDRFLGIITEHYGGAFPLWLA-----PVQAKIIPVSNTVHRDC 555 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E+++ ++ K G D E++G + A + P +VG + V ++ Sbjct: 556 AEQVHRQMKKAGIRAELDQRDEKLGYKIREAQIKKIPYIAVVGDQECRHHTVHVRQYGQE 615 Query: 425 IREDMSLEEVINYASHRFSNN 445 + ++ + ++ + + Sbjct: 616 DTFEENVSDFVSRIINETNKR 636 >gi|170288224|ref|YP_001738462.1| prolyl-tRNA synthetase [Thermotoga sp. RQ2] gi|226701351|sp|B1L8Y1|SYP_THESQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|170175727|gb|ACB08779.1| prolyl-tRNA synthetase [Thermotoga sp. RQ2] Length = 577 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 114/273 (41%), Positives = 162/273 (59%), Gaps = 1/273 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + P L+E P D E SH+ +LR G I + + GIY++LPLG++ L + I+REE Sbjct: 1 MRMKDLYAPTLKETPSDVETVSHEYLLRGGFIRKTAAGIYTYLPLGRRVLLKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+ +P LQ A+LW +SGR+D YG EM++L DR+++ GPTHEE++TD+ ++ Sbjct: 61 MNRIGAQEILMPILQPAELWKQSGRWDDYGPEMMKLKDRHERDFTLGPTHEEIVTDLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP YQ+ K+RDE+RPRFG++R+REF+MKDAYSF + E +Y + Sbjct: 121 ELRSYRQLPLVVYQVANKYRDEIRPRFGLLRAREFIMKDAYSFHSSWESLDETYELFKEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSENTDF 239 Y RI RLG+K + + AE+G IGG+ SHEF+V A GET V FC K Sbjct: 181 YSRIMERLGVKYMVIEAETGAIGGNASHEFVVPAKIGETNVLFCEKCGYQASDEKAEYKG 240 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 + P + F +P Sbjct: 241 EYTQEQEEEKPFKKVPTPGVKTIEEVSEFLGVP 273 Score = 147 bits (370), Expect = 5e-33, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 98/196 (50%), Gaps = 7/196 (3%) Query: 258 ATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 D+ D P + +GIE+GHIF GTKYS M A F +G+ MG Sbjct: 378 EWYDLRTMVEGDPCPVCGEPLKATKGIELGHIFKLGTKYSEAMKAYFMDENGEMKPFIMG 437 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YG G R +AAV+E HD G+IWP S+AP+ + + + +D + EKIY LS+ Sbjct: 438 CYGWGVSRTMAAVVEHFHDENGMIWPLSIAPYTVVVDILNMNDAEQKQVGEKIYQVLSEK 497 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE-- 433 G +V DD G +F ADL+GFP+++ VG + + + VE+K R + ++++ Sbjct: 498 GEEVVLDDREVSPGFKFKDADLIGFPIRINVG-RSLKEGVVELKKRYSKELVKVNIKNGF 556 Query: 434 --VINYASHRFSNNRP 447 ++ P Sbjct: 557 GTLLETLEKMKREYDP 572 >gi|15618715|ref|NP_225001.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae CWL029] gi|15836339|ref|NP_300863.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae J138] gi|16752234|ref|NP_445602.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae AR39] gi|33242166|ref|NP_877107.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae TW-183] gi|8928382|sp|Q9Z7A0|SYT_CHLPN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|4377117|gb|AAD18944.1| Threonyl tRNA Synthetase [Chlamydophila pneumoniae CWL029] gi|7189978|gb|AAF38837.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae AR39] gi|8979180|dbj|BAA99014.1| threonyl tRNA synthetase [Chlamydophila pneumoniae J138] gi|33236677|gb|AAP98764.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae TW-183] Length = 635 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 72/439 (16%), Positives = 139/439 (31%), Gaps = 42/439 (9%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 I + RD + KL L + + S G+ + P G D + ++ G E Sbjct: 229 QIEEAKKRDHRVLGAKLDLFSQ--QESSPGMPFFHPRGMIVWDALIRYWKQLHTAAGYKE 286 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 + P L + LW SG +D+Y M L +D+ P + +++ + SY+ Sbjct: 287 ILTPQLMNRQLWEVSGHWDNYKANMYTLQ-IDDEDYAIKPMNCPGCMLYYKTRLHSYKEF 345 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P ++ R E G+MR R F DA+ LTPE + + ++ Sbjct: 346 PLRVAEVGHVHRQEASGALSGLMRVRAFHQDDAH-VFLTPEQVEEETLNILQLVSTLYGT 404 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 GL+ + + P E + + N + Sbjct: 405 FGLEY-HLELSTRP----------------EKDTIGDDSLWELATDALNRALVQSGTPFI 447 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 + A Y D+H K R + G I + A G Sbjct: 448 VRPGEGAFYGPKIDIHV----------KDAIQRTWQCGTI-QLDMFLPERFELEYTTAQG 496 Query: 308 KDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 M + R + +IE+ + Sbjct: 497 TKSVPVMLHRALFGSIERFLGILIENFKGRFPLWLSPEQVRIITVA-------DRHIPRA 549 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +++ ++G V DD E + + A + + +G ++++ + ++ R + Sbjct: 550 KELEEAWKRLGLVVTLDDSSESVSKKIRNAQNMQVNYMITLGDHEINENVLAVRTRDNRV 609 Query: 426 REDMSLEEVINYASHRFSN 444 D+S+E +N ++ Sbjct: 610 INDVSVERFLNTILEEKNS 628 >gi|85705178|ref|ZP_01036278.1| threonyl-tRNA synthetase [Roseovarius sp. 217] gi|85670500|gb|EAQ25361.1| threonyl-tRNA synthetase [Roseovarius sp. 217] Length = 648 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 76/443 (17%), Positives = 142/443 (32%), Gaps = 44/443 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD ++ L + + + G W P G + +R +Q R G Sbjct: 236 YLTFLEEAERRDHRKLGREMDLF--HMQEEAPGQVFWHPNGWTVYTTLQDYMRRQQRRGG 293 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIFRS 120 +E++ P + LW SG ++ Y + M + R P + IF Sbjct: 294 YVEVNTPQVVDRKLWEASGHWEKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQ 353 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R E G+MR R F DA+ F T + + + Sbjct: 354 GLKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFC-TEDQIESETARFIA 412 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 I+ LG + + + P S E D + + Sbjct: 413 FLSGIYADLGFPNFEVLFSTRPDVRAGSDE-----------------VWDKAESALLSAT 455 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + A Y + L D++ + ++ F + + Sbjct: 456 RAAGIEPKVNPGEGAFYGPKLEF---TLTDAIGRKWQCGTHQVD----FVLPER----LD 504 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + G DG H + +G+ ++ H G+ W S++ Sbjct: 505 ANYIGTDGAKHRPVMLHRAVLGSFERFIGILIEEHSGRLPFWLAPRQVVVASIV------ 558 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D K+ L+ + D E+I + + P+ + G + V D V + Sbjct: 559 SDADDCVTKVARNLTDLNIRAEADTRNEKINYKVREHSVGKVPVILACGPREVEDGTVSL 618 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + L++V + Sbjct: 619 RRLGEKDSRIVPLDQVAAELARE 641 >gi|269302597|gb|ACZ32697.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN] Length = 635 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 73/439 (16%), Positives = 139/439 (31%), Gaps = 42/439 (9%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 I + RD + KL L + + S G+ + P G D + ++ G E Sbjct: 229 QIEEAKKRDHRVLGAKLDLFSQ--QESSPGMPFFHPRGMIVWDALIRYWKQLHTAAGYKE 286 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 + P L + LW SG +D+Y M L +D+ P + +++ + SY+ Sbjct: 287 ILTPQLMNRQLWEVSGHWDNYKANMYTLQ-IDDEDYAIKPMNCPGCMLYYKTRLHSYKEF 345 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P +I R E G+MR R F DA+ LTPE + + ++ Sbjct: 346 PLRVAEIGHVHRQEASGALSGLMRVRAFHQDDAH-VFLTPEQVEEETLNILQLVSTLYGT 404 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 GL+ + + P E + + N + Sbjct: 405 FGLEY-HLELSTRP----------------EKDTIGDDSLWELATDALNRALVQSGTPFI 447 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 + A Y D+H K R + G I + A G Sbjct: 448 VRPGEGAFYGPKIDIHV----------KDAIQRTWQCGTI-QLDMFLPERFELEYTTAQG 496 Query: 308 KDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 M + R + +IE+ + Sbjct: 497 TKSVPVMLHRALFGSIERFLGILIENFKGRFPLWLSPEQVRIITVA-------DRHIPGA 549 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +++ ++G V DD E + + A + + +G ++++ + ++ R + Sbjct: 550 KELEEAWKRLGLVVTLDDSSESVSKKIRNAQNMQVNYMITLGDHEINENVLAVRTRDNRV 609 Query: 426 REDMSLEEVINYASHRFSN 444 D+S+E +N ++ Sbjct: 610 INDVSVERFLNTILEEKNS 628 >gi|224417829|ref|ZP_03655835.1| threonyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|253827169|ref|ZP_04870054.1| threonyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|313141370|ref|ZP_07803563.1| threonyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|253510575|gb|EES89234.1| threonyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|313130401|gb|EFR48018.1| threonyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] Length = 605 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 70/444 (15%), Positives = 150/444 (33%), Gaps = 40/444 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD ++ L T + G+ WLP G + N+ ++ + Sbjct: 197 LNQYLRQMEEAKKRDHRKVGTEMELFT-FDEEIGAGLPIWLPKGARLRRNIERLLTKALI 255 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G + P + + +W SG Y +YG+ M + P + +++S + Sbjct: 256 QRGYEPVRGPEILKSAVWKTSGHYSNYGENM-YFTTIDGVEYGIKPMNCVGHIKVYQSAL 314 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP FY+ + R E G++R REF DA+ F + + + Sbjct: 315 RSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCRPSQIATE-VENIIDF- 372 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + I + + T + S + + + + Sbjct: 373 -----------------TKKIMDSFDFSYEMEISTRPEKSIGSDEVWEEATQALKNALEI 415 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ K+ D++ + I++ Sbjct: 416 CNIPYKIDEGGGAFYGPKIDI---KITDAIGRKWQCGTIQIDMNLP--------ERFKLE 464 Query: 302 FKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + + V + +G+ A++ + + I I + Sbjct: 465 YTDENNSSKQPVMIHRAILGSFERFIAILTEHFG------GEFPFFIAPTQIIIIPLGEA 518 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 +++ +L V D+ E + + A+ P+ V++G+K + V I+ Sbjct: 519 QESYAKELRNQLLNVNVYAEIDNKNETLNKRIRNAEKQRVPMIVVLGAKEEQEKIVAIRD 578 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R + M +E I ++ + Sbjct: 579 RREKQQSTMGFDEFIKFSKEKMRE 602 >gi|282890339|ref|ZP_06298867.1| hypothetical protein pah_c016o048 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499721|gb|EFB42012.1| hypothetical protein pah_c016o048 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 641 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 72/442 (16%), Positives = 143/442 (32%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD ++ KL L + + + + G+ P G + + A +R+ + Sbjct: 230 YLTSVEEAKKRDHKVLGAKLDLFS--LKEEAPGMPFIHPKGTIIWNELLAYLRQCLDDKN 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 IE+ PT+ + DLW SG + +Y + M ++ ++ P + +R I SY Sbjct: 288 YIEIKTPTMMTRDLWELSGHWSNYRQNMFT-SEIENRDFAIKPMNCPGCMLYYRGQIHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP +I R E G+ R R F DA+ F + + I Sbjct: 347 RELPLRVAEIGNVHRFEPSGSLSGLFRVRSFHQDDAHIFMKPSDIRSE-ILNVLNLAHEI 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + GL + + P E + + D+ Sbjct: 406 YSTFGLTYR-LELSTRP----------------EKNTIGTDKEWEIATEGLKNALDETGR 448 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D H + D++ + +++ F + Sbjct: 449 PYRINEGDGAFYGPKIDFH---IQDAINRTWQCGTIQLDMALPEKF--------ELEYTA 497 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + G++ ++ G+ +W + + + Sbjct: 498 EDGSRQRPVMIHRAIFGSIERFFGILIEHFSGRFPLW------ISPLQVRLIPVADRHVE 551 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + + G D+ E + + A L + VG + V + V ++ R Sbjct: 552 YARTLRKQFKQAGFHCDIDESNESVSKKVRNAQLSQINYMLTVGDQEVQNHTVNLRTREN 611 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + ++ EE+I + Sbjct: 612 VVLGEIKPEELIASMLEEKRSR 633 >gi|251778178|ref|ZP_04821098.1| proline--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082493|gb|EES48383.1| proline--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 570 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 122/237 (51%), Positives = 159/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+E P +AEI SHKLMLR+GMI + + GIY+++PLG KAL V IIREE Sbjct: 1 MKMSNMLISTLREVPAEAEIDSHKLMLRSGMIRKMASGIYNYMPLGLKALKKVEDIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E + A+LW SGR+D+YG EM R+ DRN++ GPTHEEV TDI ++ Sbjct: 61 MNEAGAQEFLASAMIPAELWQSSGRWDAYGAEMFRVKDRNERDFCLGPTHEEVFTDIAKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFGVMRSREF+MKDAYSFD +G SYNKM+ + Sbjct: 121 EIKSYKQLPVNLYQIQTKYRDERRPRFGVMRSREFVMKDAYSFDKDQQGLDLSYNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y++IF+R GL + + A+SG IGG S EF+V ++ GE + + D+ E Sbjct: 181 YVKIFNRCGLDAKCVEADSGAIGGSNSAEFMVKSEVGEDDIVFCTEC-DYAANIEKA 236 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 70/211 (33%), Positives = 105/211 (49%), Gaps = 4/211 (1%) Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL--PENKRVSARGIEVGHIFYFGTKY 294 T ++ V D N ++ K +RG EVGHIF GTKY Sbjct: 357 TGANETGYHIKNVNYGRDFEGIIGDYRNVVEGEACSICGGKLTISRGTEVGHIFKLGTKY 416 Query: 295 SLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 S M A F +GK+ MG YGIG R +A++IE +D GI+WP +VAP+ +S+I + Sbjct: 417 SEAMDAKFIAENGKEAPFIMGCYGIGVTRTMASIIEQHNDESGIVWPLAVAPYHVSVIAV 476 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 D+ K+Y L +G + DD E+ G +F ++++G P+++ VG K + D Sbjct: 477 NVKDEEQVKIATKLYEDLKSIGVEALLDDRNERAGVKFKDSEIMGIPMRITVGKK-IVDG 535 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 +VE K R TG E + +E+V F N Sbjct: 536 EVEFKLR-TGDMEVVKIEDVCQIVKGEFDKN 565 >gi|226355500|ref|YP_002785240.1| threonyl-tRNA synthetase [Deinococcus deserti VCD115] gi|259516378|sp|C1D0W2|SYT_DEIDV RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226317490|gb|ACO45486.1| putative threonine--tRNA ligase (threonyl-tRNA synthetase) [Deinococcus deserti VCD115] Length = 649 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 80/447 (17%), Positives = 151/447 (33%), Gaps = 43/447 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +L L+E R D +L L T I KG+ WLP G + + ++E+Q R Sbjct: 237 YLHQLEEAKRRDHRKLGRELELFT--IDPLVGKGLPLWLPNGTVLREELAGFLKEQQFRR 294 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + + +L+ SG Y Y + +D+ + P + I+ S +S Sbjct: 295 GYQGVITPNIGNLELYKTSGHYPYYADGQFNPIEVDDEQYMLKPMNCPHHVRIYASKPRS 354 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + +R E G+ R R F DA+ F + K + + + Sbjct: 355 YRDLPVRLAEFGTVYRYEQSGELNGLTRVRGFTQDDAHLFCRPDQLKKE-FLDVLDLTVL 413 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + G+ + R + D + + + D++ Sbjct: 414 VLKTFGMNDVRFRVGTR--------------DPESDKYVGDEANWELAERQILEAVDEVG 459 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 +I A Y D + D L ++ ++ ++ Sbjct: 460 LPYTIEPGDAAFYGPKLDF---VVKDVLGREWQLGTIQVDYNLP--------ERFDISYV 508 Query: 304 GADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DG+DH M R V +IE + Sbjct: 509 GEDGQDHRPIMIHRAPFGSLERFVGILIEHYAGDFPLWLAPRQVMIIPIA-------DRH 561 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + E++ + L G DD ++ ++ A+L P+ +IVG K +V ++ R Sbjct: 562 NEYAEELRSELHAAGLRAEVDDSSNRMQAKVRTAELSKIPVMLIVGDKEQEARQVSVRER 621 Query: 422 ---LTGIREDMSLEEVINYASHRFSNN 445 R+ ++ +++ R+ Sbjct: 622 SVEGHKERKGVAFDDLCAELLERYRAR 648 >gi|309789973|ref|ZP_07684549.1| threonyl-tRNA synthetase [Oscillochloris trichoides DG6] gi|308227993|gb|EFO81645.1| threonyl-tRNA synthetase [Oscillochloris trichoides DG6] Length = 594 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 75/443 (16%), Positives = 137/443 (30%), Gaps = 39/443 (8%) Query: 8 LPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E R D +L L G+ + P G+ + +RE Q R G Sbjct: 185 LHNLEEAKRRDHRKLGKELGLF-FFSEDVGPGLPIFTPKGEILRYEMERYVREVQTRYGY 243 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLA-DRNDKAMIYGPTHEE-VMTDIFRSHIKS 124 + + L+ SG Y++Y M + D P + MT + + S Sbjct: 244 QHVWTGNVVKEQLYHRSGHYENYRDSMFPPMVESEDLVFRLKPMNCPSHMTLFNQMGVIS 303 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP F + +R E G+ R R D + F + + ++ Sbjct: 304 YRDLPMRFAEFATLYRYEDSGALNGLTRVRALTQDDCHIFCRPDQIQEE-FSLALNLIRE 362 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + +R G + + + D Sbjct: 363 VLSTYHFTDYKVRLSLRGDTGKF---------------VADDEKWEQATSALRAALDANG 407 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y +D D L ++S ++ G + Sbjct: 408 VEYTEEAGEAAFYGPKADFL---ARDVLGREWQLSTIQVDFIQPSRLG--------CEYI 456 Query: 304 GADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G D + H + G V+ + +P +AP + +I I Sbjct: 457 GEDNQPHTPVVLHRAVTGTTERFLGVLI---EHYAGAFPLWLAPVQAVIIPITDK---QM 510 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +A + + RL VG V D +++ + A L P +I+G+K + V ++ R Sbjct: 511 EAAQAVRQRLMAVGMRVEVDSSRDRMQGKIRRAQLQKIPYMLIIGNKELEAGAVAVRLRS 570 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + +++ I A Sbjct: 571 GEDLGAIPVDDFIARAQEEIKTR 593 >gi|326780460|ref|ZP_08239725.1| threonyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1] gi|326660793|gb|EGE45639.1| threonyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1] Length = 658 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 67/442 (15%), Positives = 141/442 (31%), Gaps = 38/442 (8%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD ++L L + + G+ + P G + R G + Sbjct: 252 LEEAAKRDHRKLGNELDLFS-FPDEIGPGLAVFHPKGGVIRRAMEDYSRRRHEEEGYEFV 310 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNL 128 P L+ +SG D Y M +D P + + IF + +SYR L Sbjct: 311 YSPHATKGKLFEKSGHLDWYADGMYPPMQLDDGVDYYLKPMNCPMHNLIFDARGRSYREL 370 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P ++ +R E G+ RSR F DA+ + + ++ ++ L + Sbjct: 371 PLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQMAEEL-DRTLTFVLNLLRD 429 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 GL + + + S + + + + Sbjct: 430 YGLTDFYLELST----------------KDPEKYVGSDETWEEATETLRQVAEKQGLPLV 473 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 A Y + + D++ ++S ++ F ++ + G DG Sbjct: 474 PDPGGAAFYGPKI---SVQCKDAIGRTWQMSTVQLD----FNLPERFD----LEYTGPDG 522 Query: 308 KDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + G++ AV+ + +P +AP + I I + Sbjct: 523 SKQRPVMIHRALFGSIERFFAVLL---EHYAGAFPVWLAPVQAVGIPIG---DAHIPYLQ 576 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + A+ K G V D +++ + P +I G + +++ V ++R Sbjct: 577 EFAAKARKQGLRVDVDASSDRMQKKIRNQQKNKVPFMIIAGDEDMANGAVSFRYRDGSQE 636 Query: 427 EDMSLEEVINYASHRFSNNRPV 448 + ++E I + + V Sbjct: 637 NGIPVDEAIAKIAKAVEDRVQV 658 >gi|326693745|ref|ZP_08230750.1| threonyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773] Length = 654 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 73/443 (16%), Positives = 144/443 (32%), Gaps = 35/443 (7%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + RD + L + G+ WLP G V I +++ G Sbjct: 236 LQRREEAKERDHRTIGRDMDLF-FTSQEVGSGLPVWLPNGATIRRQVERYITDKELANGY 294 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSY 125 + P L + +L+ SG +D Y ++M D D P + +F+ +SY Sbjct: 295 QHVYTPVLSNLNLYKTSGHWDHYREDMFPPMDMGDGEFLELRPMNCPSHIMVFKHKPRSY 354 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 R LP ++ + R E + + + + PE + + + + ++ Sbjct: 355 RELPIRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVEPEKLEEEFKSILTMMMEVY 414 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS-ENTDFDDIIS 244 + R D T+ + D M + DD+ Sbjct: 415 RDFNITDYRFRLS--------------YRDPKNTEKYFDDDEMWEKSQAQLKRAMDDLGL 460 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV + +L + +S ++ F ++ + T+ G Sbjct: 461 DYYEAEGEAAFYGPKLDVQTKT---ALGNEETMSTIQLD----FLLPERF----NLTYIG 509 Query: 305 ADGKDHYV--QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 ADG+D++ + +G M A + + G W +AP ++ +I + Sbjct: 510 ADGQDNHRPVMLHRGIVGTMERFTAYLIEMYKGAFPTW---LAPLQVQIIPVNLG--AHG 564 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 E+I +L G + ++G A P +++G V V ++ Sbjct: 565 AYAEQIKKQLQDAGLRANVETKDAKMGYLIREAQTNKIPYTLVLGDSEVEGQTVTVRKYG 624 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 M + + +N Sbjct: 625 EEKTTTMPIADFQAEILADVANY 647 >gi|149183492|ref|ZP_01861921.1| prolyl-tRNA synthetase [Bacillus sp. SG-1] gi|148848804|gb|EDL63025.1| prolyl-tRNA synthetase [Bacillus sp. SG-1] Length = 569 Score = 227 bits (579), Expect = 3e-57, Method: Composition-based stats. Identities = 120/282 (42%), Positives = 167/282 (59%), Gaps = 1/282 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S +P L+E P DAE+ SH+ +LR G I Q+S GIYS+LPLG+K L V IIREE Sbjct: 1 MKQSMTLIPTLRETPADAEVKSHQQLLRAGFIRQNSSGIYSFLPLGRKVLQKVEEIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G +E+ +P LQ A+LW ESGR+ +YG E++RL DR+ ++ G THEEV+T + R Sbjct: 61 MINAGGVELLMPALQQAELWQESGRWGTYGPELMRLEDRHKRSFALGATHEEVITSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF + E +Y K+F + Sbjct: 121 EIKSYKKLPLTLFQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHSSYESLDDTYEKIFQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F R GL + A+SG +GG +HEF+VL+D GE + S + E Sbjct: 181 YSNVFTRCGLNFRAVIADSGAMGGKDTHEFMVLSDIGEDTIAYSDTSQ-YAANIEMAPVT 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 ++ E T E++ L K + + Sbjct: 240 ARYEESTEAENEMQKIETTGQKSIEEVSSHLQVEKDKCLKSL 281 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 65/187 (34%), Positives = 100/187 (53%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ + D P+ + +GIEVGH+F GT+YS M A + +G+ + MG Y Sbjct: 382 ADLRFIQEGDPSPDGQGTIVFAKGIEVGHVFKLGTRYSDAMGAQYLDENGRAQSMIMGCY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R +AAV E D G+ WP S+ PF + ++ I + R+ E++Y+ L + Sbjct: 442 GIGVSRTLAAVAEQYCDENGLQWPSSLTPFDVHIVPINIKNDEQRELAEQLYSELKEQRF 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 DV DD E+ G +F +DL+G P +V VG K +D VE+K R TG ++ +E+ Sbjct: 502 DVLLDDRQERPGVKFTDSDLIGLPFRVTVGKK-AADGVVEVKIRKTGDVIEVHKDELTAK 560 Query: 438 ASHRFSN 444 F N Sbjct: 561 LQELFRN 567 >gi|167036776|ref|YP_001664354.1| prolyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320115198|ref|YP_004185357.1| prolyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|226701349|sp|B0KCH5|SYP_THEP3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|166855610|gb|ABY94018.1| prolyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319928289|gb|ADV78974.1| prolyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 570 Score = 227 bits (579), Expect = 3e-57, Method: Composition-based stats. Identities = 116/255 (45%), Positives = 162/255 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +AEI SH LML+ ++ + + G+Y +LPLGQ+ L V I+REE Sbjct: 1 MRLSQLLVPTLREIPAEAEIPSHILMLKAALMRKLASGVYIYLPLGQRVLRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ + L A+L ESGR+D +G EM +L DRN++ GPTHEEV TD+ R+ Sbjct: 61 MDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFKLKDRNERDFCLGPTHEEVFTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE RPRFGVMRSREF+MKDAYSFD+ EG S+NKM+ + Sbjct: 121 EVKSYRQLPLILYQIQTKFRDERRPRFGVMRSREFIMKDAYSFDMDWEGLDKSFNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK + + A+SG +GG S EF+V++ GE + + + Sbjct: 181 YCRIFDRCGLKYLVVEADSGAMGGKDSKEFMVISGVGEAVIAYCDNCGYAANEEKAECLI 240 Query: 241 DIISLNSIVEQWTAP 255 + + ++ + Sbjct: 241 NQEIVEEMLPKEEVY 255 Score = 174 bits (441), Expect = 3e-41, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 101/190 (53%), Gaps = 3/190 (1%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P RGIEVGHIF GTKYS + A + +G + + MG Sbjct: 381 VVADIKNVIEGDKCPRCGSPLKIDRGIEVGHIFKLGTKYSDALGAKYVDEEGNEKPIIMG 440 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R VAA+IE HD KGIIWP SVAP+ + ++ + ++ E IYA L K Sbjct: 441 CYGIGINRTVAAIIEQHHDEKGIIWPMSVAPYHVIIVPVNVSNEAQNRVAEDIYAALQKE 500 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD + G +F ADLLG P+++ VG K V D VEIK R E++ + +V+ Sbjct: 501 GIEVLIDDRDLRAGVKFNDADLLGIPIRITVGKK-VDDGIVEIKLRENEEAEEVKISDVV 559 Query: 436 NYASHRFSNN 445 + Sbjct: 560 EKVKNIIKEK 569 >gi|222148633|ref|YP_002549590.1| threonyl-tRNA synthetase [Agrobacterium vitis S4] gi|254783504|sp|B9JWF4|SYT_AGRVS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|221735619|gb|ACM36582.1| threonyl-tRNA synthetase [Agrobacterium vitis S4] Length = 666 Score = 227 bits (579), Expect = 3e-57, Method: Composition-based stats. Identities = 78/449 (17%), Positives = 148/449 (32%), Gaps = 46/449 (10%) Query: 7 FLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L IL + RD ++ L + G+ W G K ++ A +R T Sbjct: 234 YLHILAEAEKRDHRKLGREMDLF--HFQEEGPGVVFWHGKGWKMFQSLTAYMRRRLANT- 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----------DRNDKAMIYGPTHEEVM 114 E++ P + LW SG + Y + M + + + + P + Sbjct: 291 YQEVNAPQVLDKSLWETSGHWGWYQENMFAVKSAHAFTNPNDPEADQRVFALKPMNCPGH 350 Query: 115 TDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHS 173 IF+ +KSYR LP + L R E G+MR R F DA+ F + + Sbjct: 351 VQIFKHGLKSYRELPVRLAEFGLVHRYEASGALHGLMRVRGFTQDDAHVFCTEEQMAAEC 410 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 L ++ G K + ++ + P S E A++ T+V I Sbjct: 411 LRIN-DLILSVYEDFGFKEVVVKLSTRPEKRVGSDELWDRAESVMTEVL-------KAIE 462 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 ++ L A Y + L D++ + ++ FG Sbjct: 463 EQSGGRIKTGIL----PGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG-- 513 Query: 294 YSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 A + + + G+M ++ + G +W + ++ Sbjct: 514 ------AFYIDQHSEKTQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPLQVVVATIT 567 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 D + +L G +V D E+I + + P+ ++ G + Sbjct: 568 ------SEADDYGRDVAEQLRDAGLEVETDFRNEKINYKVREHSVGKVPVIMVCGKREAE 621 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYASHR 441 + V I+ + + M+L+E I Sbjct: 622 ERTVNIRRLGSQDQVSMTLDEAIASLVDE 650 >gi|115446545|ref|NP_001047052.1| Os02g0538000 [Oryza sativa Japonica Group] gi|50251985|dbj|BAD27919.1| putative threonyl-tRNA synthetase [Oryza sativa Japonica Group] gi|50252661|dbj|BAD28830.1| putative threonyl-tRNA synthetase [Oryza sativa Japonica Group] gi|113536583|dbj|BAF08966.1| Os02g0538000 [Oryza sativa Japonica Group] gi|215765092|dbj|BAG86789.1| unnamed protein product [Oryza sativa Japonica Group] gi|222623006|gb|EEE57138.1| hypothetical protein OsJ_07040 [Oryza sativa Japonica Group] Length = 674 Score = 227 bits (579), Expect = 3e-57, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 152/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQN 62 K ++ +E R D L L + I + G+ W P G + ++ Sbjct: 264 KAYIHFKEEAKRRDHRRLGLDLDLFS--IQEDAGGGLVFWHPKGAIIRHVLEDSWKQIHL 321 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G + P + A+LW SG D Y + M D D+ P + +++ + Sbjct: 322 QRGYDLLYTPHVAKAELWKVSGHIDFYKENMYNQMDVEDELYQLRPMNCPYHILVYKRKL 381 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+ P ++ +R EL G+ R R F DA+ F L + + Sbjct: 382 HSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDE-IRGVLDLT 440 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +I + G + + + P S D + + +D Sbjct: 441 EQILGQFGFRYYEINLSTRPEKS-----------------VGSDDIWEKATLALKDALED 483 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ K+ D+L + S ++ F ++ + Sbjct: 484 KGWEYKVDEGGGAFYGPKIDL---KIEDALGRKWQCSTVQVD----FNLPERFDITY--- 533 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 K + + +G++ V+ + +P +AP + ++ + ++ Sbjct: 534 VNSNSEKKRPIMIHRAILGSLERFFGVLI---EHYAGDFPLWLAPIQARILPVTDNE--- 587 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 C ++ + L G GE++ A+ PL +VG K V + I+ R Sbjct: 588 LQYCNEVASELKSKGIRAEV-CHGERLPKLIRNAETKKVPLMAVVGPKEVQARTLTIRSR 646 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 +G M ++E +N Sbjct: 647 HSGEIGTMPVDEFFRRIQLAIANK 670 >gi|242309942|ref|ZP_04809097.1| threonyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489] gi|239523239|gb|EEQ63105.1| threonyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489] Length = 605 Score = 227 bits (579), Expect = 3e-57, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 154/444 (34%), Gaps = 40/444 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD ++ L T + G+ WLP G + N+ ++ + Sbjct: 197 LNQYLHQMEEAKKRDHRKVGTEMELFT-FDEEIGAGLPIWLPKGSRLRRNIENLLTKALI 255 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G + P + + +W SG Y +YG+ M + P + +++S + Sbjct: 256 QRGYEPVRGPEILKSAVWKTSGHYANYGENM-YFTTIDGVEYGIKPMNCVGHIKVYQSAL 314 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR LP FY+ + R E G++R REF DA+ F + + Sbjct: 315 RSYRELPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCRPSQIGIE-VENIIDFT 373 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +I G + P S E + + + Sbjct: 374 KKIMDSFGFSYEM-EISTRPQKSIGSDE-----------------VWEEATEALKNALNR 415 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ K+ D++ + I++ F Sbjct: 416 CNIPYKIDEGGGAFYGPKIDI---KITDAIGRKWQCGTVQIDMNLPDRF--------KLE 464 Query: 302 FKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + + V + +G+ A++ G+ + +AP + +I I + Sbjct: 465 YTDENNSSKQPVMIHRAILGSFERFIAILTEHFGGEFPFF---IAPTQAIIIPIG---ES 518 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 +++ L VG D+ E + + A+ P+ +I+G+K + + I+ Sbjct: 519 QESYAKELRNALLNVGVYTEIDNKNETLNKRIRNAEKQRVPMILILGAKEQEERIIAIRD 578 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R + M +E I ++ + Sbjct: 579 RREKQQFTMGFDEFIKFSKEKMRE 602 >gi|290889941|ref|ZP_06553027.1| hypothetical protein AWRIB429_0417 [Oenococcus oeni AWRIB429] gi|290480383|gb|EFD89021.1| hypothetical protein AWRIB429_0417 [Oenococcus oeni AWRIB429] Length = 663 Score = 227 bits (579), Expect = 3e-57, Method: Composition-based stats. Identities = 75/438 (17%), Positives = 156/438 (35%), Gaps = 30/438 (6%) Query: 11 LQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 L+E RD ++ L + G+ WLP G + + E++ + + + Sbjct: 240 LEERKERDHRTIGKQMELF-FTNPEIGAGLPVWLPNGAAIRRTIEDYLVEKERQNSYMNV 298 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHIKSYRNL 128 P + + DL+ SG +D Y +M +D + P + +IF +SYR+L Sbjct: 299 YTPVVSNLDLYKRSGHWDHYRDDMFPAMTADDGEQLELRPMNCPSHIEIFEHEPRSYRDL 358 Query: 129 PFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 P+ + R E + + + + PE + + + ++H Sbjct: 359 PYRIAEFGQMHRWEKSGALTGLSRVREMTLNDGHTVVAPEQVEPEFKGILQLIRDVYHDF 418 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 G D + + + + DD+ Sbjct: 419 GFTDQ-----------DYRFRLSYRDPKNTKKYYDDDAMWEHAQAALKRAMDDMGLDYFE 467 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 E A Y D+ + +L + +S ++ F ++ + + G DGK Sbjct: 468 AEGEAAFYGPKLDI---QFKTALGNEETMSTIQLD----FLLPERFDM----KYTGEDGK 516 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 DH + G + + + + +P +AP + +I + D I Sbjct: 517 DHRPVLIHR--GVVGTMERFVAFLIEKYKGQFPTWLAPVQAVVIPVNYG--AHGDYARNI 572 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADL-LGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 Y++L K G + D+ E++G A + L P ++VG + + D+ V ++ R + + Sbjct: 573 YSKLMKDGRRIKLDNRDEKLGYLIRDAQVNLKTPYILVVGDQELRDNSVTVRFRGSDQTK 632 Query: 428 DMSLEEVINYASHRFSNN 445 +M ++E + +N Sbjct: 633 EMKIDEFEEMINDDVANY 650 >gi|317125361|ref|YP_004099473.1| prolyl-tRNA synthetase [Intrasporangium calvum DSM 43043] gi|315589449|gb|ADU48746.1| prolyl-tRNA synthetase [Intrasporangium calvum DSM 43043] Length = 588 Score = 227 bits (579), Expect = 3e-57, Method: Composition-based stats. Identities = 106/282 (37%), Positives = 151/282 (53%), Gaps = 3/282 (1%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S FL L+E+P DAE+ SH+L++R G I + S G+Y+WLPLG + L NV I+REE + Sbjct: 5 MSSLFLRTLREDPADAEVPSHRLLVRAGYIRRVSPGVYTWLPLGLRVLRNVERIVREEMD 64 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+ P L + + SGR+ YG + RL DR + GPTHEE+ T + Sbjct: 65 AIGAQELLFPALLPREPFDASGRWAEYGDNIFRLQDRKGADHLLGPTHEEMFTLTVKDLY 124 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP + YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G SY +Y+ Sbjct: 125 SSYKDLPLSIYQIQTKYRDEARPRAGLLRGREFVMKDSYSFDIDEAGLDKSYQAHRDAYV 184 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGET-QVFCSKDFMDFPIPSENTDFDD 241 RIF RLG + + A +G +GG S EF+ A+ GE V C+ + + + Sbjct: 185 RIFDRLGFHYVIVEAMAGAMGGSKSEEFLATAEVGEDTYVHCTNCGYAANVEAVRVPAPE 244 Query: 242 IISLN--SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARG 281 + + P T + L P R + G Sbjct: 245 PVGWDGVPAAHAEDTPDTPTIETLVNHLNAHHPRPDRPWSAG 286 Score = 146 bits (369), Expect = 6e-33, Method: Composition-based stats. Identities = 60/187 (32%), Positives = 92/187 (49%), Gaps = 5/187 (2%) Query: 260 SDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 + + D P V RGIE+GH+F G KY+ + +GK V MGSY Sbjct: 402 IEAAEVRFGDPCPNCDHVLEGARGIEMGHVFQLGKKYAEALDLRVLDQNGKLTTVVMGSY 461 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G+G R VA V+E ++D GIIWP + P + ++ D+ A + I L G Sbjct: 462 GVGVSRAVACVVEGNYDDSGIIWPRELTPADVHIVAAG-KDEPLFRAADDIARDLEAHGL 520 Query: 378 DVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DD G G +F ++L+G P ++VG + ++D KVEIK R +G R +++L+ V+ Sbjct: 521 TCIVDDRKGVSPGVKFKDSELIGVPTIIVVG-RGLADGKVEIKDRRSGERREVALDSVVE 579 Query: 437 YASHRFS 443 Sbjct: 580 SVLAEVR 586 >gi|118591255|ref|ZP_01548654.1| threonyl-tRNA synthetase [Stappia aggregata IAM 12614] gi|118436331|gb|EAV42973.1| threonyl-tRNA synthetase [Stappia aggregata IAM 12614] Length = 656 Score = 227 bits (579), Expect = 3e-57, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 147/445 (33%), Gaps = 40/445 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD ++ L + G+ W P G ++ A R Sbjct: 237 KAYLHMLEEAEKRDHRKLGREMDLF--HFQEEGPGVVFWHPKGWDMFQSLIAYKRRVLKD 294 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD-----RNDKAMIYGPTHEEVMTDIF 118 T E++ P + LW SG + Y + M + +++ P + IF Sbjct: 295 T-YKEVNAPQVLHTSLWETSGHWTWYKENMFSVQCADPEAEDERVFALKPMNCPGHVQIF 353 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + + R E G+MR R F DA+ F + + Sbjct: 354 KHGLKSYRDLPMRLAEFGMVHRYEPSGALHGLMRVRGFTQDDAHVFCTEEQMADECLKIN 413 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G I ++ + P + A+ D E Sbjct: 414 -DLILSVYEDFGFDEIVVKLSTRPEKRVGTDAAWDHAEA---------IMSDVLKQIEAQ 463 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + + I+ A Y + L D++ + ++ FG Sbjct: 464 SGGRVKT--DILPGEGAFYGPKFEY---TLRDAIGREWQCGTTQVDFNLPERFG------ 512 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + DG+ + G+M ++ + G +W + ++ Sbjct: 513 --AFYVDKDGEKKTPVMIHRAICGSMERFLGILIENFAGHFPLWFAPLQIVVATIT---- 566 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D +++ L G V D E+I + L P+ ++ G + + V Sbjct: 567 --SEADDYGQEVADLLKAKGLKVETDFRNEKINYKVREHSLAKVPVIIVCGMREAEERTV 624 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ + + M L+E I Sbjct: 625 NVRRLGSKDQTPMGLDEAIAAFVEE 649 >gi|182439796|ref|YP_001827515.1| threonyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC 13350] gi|238689023|sp|B1W3F0|SYT_STRGG RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|178468312|dbj|BAG22832.1| putative threonyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 658 Score = 227 bits (579), Expect = 3e-57, Method: Composition-based stats. Identities = 67/442 (15%), Positives = 141/442 (31%), Gaps = 38/442 (8%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD ++L L + + G+ + P G + R G + Sbjct: 252 LEEAAKRDHRKLGNELDLFS-FPDEIGPGLAVFHPKGGVIRRAMEDYSRRRHEEEGYEFV 310 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNL 128 P L+ +SG D Y M +D P + + IF + +SYR L Sbjct: 311 YSPHATKGKLFEKSGHLDWYADGMYPPMQLDDGVDYYLKPMNCPMHNLIFDARGRSYREL 370 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P ++ +R E G+ RSR F DA+ + + ++ ++ L + Sbjct: 371 PLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQMAEEL-DRTLTFVLNLLRD 429 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 GL + + + S + + + + Sbjct: 430 YGLTDFYLELST----------------KDPEKYVGSDETWEEATETLRQVAEKQGLPLV 473 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 A Y + + D++ ++S ++ F ++ + G DG Sbjct: 474 PDPGGAAFYGPKI---SVQCKDAIGRTWQMSTVQLD----FNLPERFD----LEYTGPDG 522 Query: 308 KDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + G++ AV+ + +P +AP + I I + Sbjct: 523 SKQRPVMIHRALFGSIERFFAVLL---EHYAGAFPVWLAPVQAVGIPIG---DAHIPYLQ 576 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + A+ K G V D +++ + P +I G + +++ V ++R Sbjct: 577 EFAAKARKQGLRVDVDASSDRMQKKIRNQQKNKVPFMIIAGDEDMANGAVSFRYRDGSQE 636 Query: 427 EDMSLEEVINYASHRFSNNRPV 448 + ++E I + + V Sbjct: 637 NGIPVDEAIAKIAKAVEDRVQV 658 >gi|323339586|ref|ZP_08079860.1| threonine--tRNA ligase [Lactobacillus ruminis ATCC 25644] gi|323092981|gb|EFZ35579.1| threonine--tRNA ligase [Lactobacillus ruminis ATCC 25644] Length = 685 Score = 227 bits (579), Expect = 3e-57, Method: Composition-based stats. Identities = 72/439 (16%), Positives = 148/439 (33%), Gaps = 32/439 (7%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + + RD + + L L + + G+ W+P G + I +++ G Sbjct: 272 RQQEAHERDHRVIGNNLDLF--FVDPKVGAGLPYWMPNGATIRRTIERYIIDKEVSWGYE 329 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYR 126 + P L + DL+ +SG +D Y ++M D D + P + I+ HI+SYR Sbjct: 330 HVYTPILANVDLYKQSGHWDHYREDMFPPMDMGDGELLELRPMNCPSHIQIYNRHIRSYR 389 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 +LP ++ + R E + + + +TP+ + + + + ++H Sbjct: 390 DLPLRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVTPDQIEAEFKRTLQLMVEVYH 449 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 + R + + + + DD+ Sbjct: 450 DFNINDYRFRLS-------------YRDPKNTHKYYDDDEMWEKSQRMLKAAMDDLGLEY 496 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y DV + +L + +S ++ F ++ + GAD Sbjct: 497 FEAEGEAAFYGPKLDVQTKT---ALGGEETLSTIQLD----FLLPERFD----LKYVGAD 545 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 G++H M GI + + + ++ +N+ H D Sbjct: 546 GEEHRPVMIHRGIVSTMERFTAYLTEMYKGAFPTWLAPKQVEVIPVNLDLH----TDYAR 601 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 K+ + L+ V DD E++G + A + P ++VG V ++ Sbjct: 602 KLASALAARQIRVSVDDRNEKMGYKIRQAQVNKVPYTLVVGDNEKEQGTVTVRRYGQEKT 661 Query: 427 EDMSLEEVINYASHRFSNN 445 E M+ ++ H Sbjct: 662 ETMAFDDFKKILDHDLETY 680 >gi|124267077|ref|YP_001021081.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methylibium petroleiphilum PM1] gi|166225459|sp|A2SH07|SYT_METPP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|124259852|gb|ABM94846.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methylibium petroleiphilum PM1] Length = 635 Score = 227 bits (579), Expect = 3e-57, Method: Composition-based stats. Identities = 77/444 (17%), Positives = 147/444 (33%), Gaps = 41/444 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L +L+E RD +L L + +H+ G+ W P G V +R Sbjct: 229 QQYLHMLEEAEKRDHRKLGRELDLF--HLDEHAPGLVFWHPKGWTVWQQVEQYMRAVYRD 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G +E+ P + LW ++G +D Y + M + + + P + I++ IK Sbjct: 287 NGYLEVKGPQILDQGLWEKTGHWDKYRENMF-VTESEKRDYALKPMNCPGHILIYKQGIK 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + + R+E G+MR R F D + F Sbjct: 346 SYRDLPLRYGEFGQCHRNEPTGGLHGIMRVRGFTQDDGHIFCTEEHILPECVAYT-ALLQ 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +++ G I + + P S D + Sbjct: 405 KVYKDFGFNDIIYKVATRPEKR-----------------IGSDAVWDKAEHALMESLRAS 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + L D+L + ++ F + + A + Sbjct: 448 GCEFVVSPGDGAFYGPKIEY---TLKDALGRQWQCGTMQVD----FSLPER----LDAVY 496 Query: 303 KGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G+ V + +G++ ++ + P +AP ++ ++NI Sbjct: 497 VAESGERLFPVMLHRAIVGSLERFIGILI---EQHAGALPAWLAPVQVMVLNITDG---Q 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D +I L K G D E+I + + P ++VG K + V ++ R Sbjct: 551 ADYAAEIAKTLQKQGVRAGVDLRNEKITYKIREHSMQKLPYILVVGDKEKAAGAVAVRAR 610 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 M L+ + ++ Sbjct: 611 GNQDLGVMPLDAFSQRMASDIAHK 634 >gi|296446450|ref|ZP_06888394.1| threonyl-tRNA synthetase [Methylosinus trichosporium OB3b] gi|296256085|gb|EFH03168.1| threonyl-tRNA synthetase [Methylosinus trichosporium OB3b] Length = 643 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 77/425 (18%), Positives = 145/425 (34%), Gaps = 37/425 (8%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E R D ++ L + G W G ++ + +R Q G Sbjct: 232 YLHRLEEAERRDHRRLGREMDLF--HFQEEGPGTIFWHEKGWALFQSLVSYMRRRQKAAG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E++ P + LW SG + +Y + M +++ P + IF++ +KSY Sbjct: 290 YKEVNTPQVLDRALWETSGHWQTYRENMFLTKTEDERIFALKPMNCPGHVQIFKNGLKSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R E G+MR R F DA+ F + + + L I Sbjct: 350 RDLPVKIAEFGIVHRYEPSGALHGMMRVRAFTQDDAHIFCNEDQIMEEALKIN-DLILTI 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + ++ + P S E A+ +V + T + Sbjct: 409 YRDFGFDDVVVKLSTRPEKHVGSDEAWAKAEAALYKVL-----DELKARGLKTGVN---- 459 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D++ + ++ FG A + G Sbjct: 460 -----PGEGAFYGPKLEY---TLRDAIGREWQCGTTQVDFNLPGRFG--------AFYIG 503 Query: 305 -ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 K V + G++ ++ + G +W + ++ Q D Sbjct: 504 SDSEKKTPVMIHRAMFGSLERFTGILIEHYAGHLPLWLSPLQIVVCTIT------QDADD 557 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ A VG V D E+I + L P+ ++VG K ++ V I+ + Sbjct: 558 YAYEVAAEARNVGLAVDLDLRNEKITYKVREHSLAKVPVLLVVGKKEAAEHTVSIRRLGS 617 Query: 424 GIRED 428 + Sbjct: 618 QAQSS 622 >gi|288920333|ref|ZP_06414645.1| threonyl-tRNA synthetase [Frankia sp. EUN1f] gi|288348281|gb|EFC82546.1| threonyl-tRNA synthetase [Frankia sp. EUN1f] Length = 658 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 70/445 (15%), Positives = 138/445 (31%), Gaps = 37/445 (8%) Query: 7 FLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + L + RD +L L + + G+ + P G + R G Sbjct: 248 YQHRLAEAEKRDHRRLGAELDLFS-FPTEIGPGLAVFHPKGGAIRTVMEDYSRRRHIEAG 306 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKS 124 ++ P + +DL+ SG D + M P + + IFRS +S Sbjct: 307 YEFVNTPHITKSDLYEISGHLDWFADGMYPPMQLDGGADYYLKPMNCPMHILIFRSRGRS 366 Query: 125 YRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP ++ +R E G+ R R DA+ F + + + + L Sbjct: 367 YRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDAHLFCAREQLPEEL-DSVLKFVLG 425 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + GL+ + + P E + S + Sbjct: 426 LLRDYGLEDFYLELSTRP----------------EGKAIGSDEEWAEATELLREAASKQD 469 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y + + D++ ++S ++ F ++ + A Sbjct: 470 LELVMDEGGGAFYGPKI---SVQAKDAIGRTWQLSTIQVD----FQLPQRFDMTYQAA-- 520 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + G + A++ + P +AP ++ I I Sbjct: 521 -DGTRQRPFMIHRALFGTIERFFAILL---EHYAGALPPWLAPVQVVGIPIT---DEHVP 573 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + A+L + G V D +++ + A P ++ G + VS V + R Sbjct: 574 YLADVAAKLRERGIRVEVDSSDDRMQKKIRTAQKQKVPFMLLAGDEDVSKGAVSFRFRDG 633 Query: 424 GIREDMSLEEVINYASHRFSNNRPV 448 R + ++E + V Sbjct: 634 TQRNGVPVDEAVAEILDVVERRVQV 658 >gi|119484696|ref|ZP_01619178.1| prolyl-tRNA synthetase [Lyngbya sp. PCC 8106] gi|119457514|gb|EAW38638.1| prolyl-tRNA synthetase [Lyngbya sp. PCC 8106] Length = 604 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 123/276 (44%), Positives = 162/276 (58%), Gaps = 7/276 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK L+E+P +AEI SHKL++R G I + GIY++LPL + L V+ I+REE Sbjct: 1 MRLSKMLFVTLREDPAEAEIPSHKLLVRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N TGA E +P +Q A+LW ESGR+D+Y K M L DR ++ + GPTHEEV+T I Sbjct: 61 MNATGAEECLLPQVQPAELWQESGRWDTYTKAEGIMFALRDRRNRDLALGPTHEEVITTI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + I+SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF + E K +Y M Sbjct: 121 AKEMIRSYQQLPLHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHIDEESLKATYKDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y I R GL + A+SG IGG S EF+VLA+ GE +V ++D + E Sbjct: 181 DRAYRNILTRSGLAFRAVEADSGAIGGSGSQEFMVLAEAGEDEVLYTEDG-KYAANVEKA 239 Query: 238 ---DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 D S E+ P AT + L S Sbjct: 240 VSLPADAEPSTFKTYEKRETPNTATIETVCNFLKCS 275 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 62/172 (36%), Positives = 99/172 (57%), Gaps = 1/172 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P +ARGIEVGHIF GTKYS M AT G++ + MG YG+G R+ + +E Sbjct: 427 PNQILETARGIEVGHIFQLGTKYSQMMGATCTNEKGEEIPLVMGCYGVGVSRLAQSAVEQ 486 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 S+D GIIWP ++AP+ + +D + E +Y +L++VG + DD E+ G + Sbjct: 487 SYDKDGIIWPVAIAPYHAIITIPNINDTQQLETAENLYTQLNQVGIETLLDDRNERAGVK 546 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 F ADL+G P +++ G + + KVEI R T +++++E+V++Y + Sbjct: 547 FKDADLIGIPYRIVTG-RSLKSGKVEIVERATHTSQEVAVEDVVSYLQKSIA 597 >gi|332187352|ref|ZP_08389090.1| threonyl-tRNA synthetase [Sphingomonas sp. S17] gi|332012513|gb|EGI54580.1| threonyl-tRNA synthetase [Sphingomonas sp. S17] Length = 664 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 86/454 (18%), Positives = 159/454 (35%), Gaps = 48/454 (10%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +++ + + RD +++ L + Q + G W P G + + A +R + Sbjct: 236 LAEHLTRLEEAAKRDHRKLGNEMDLF--HLQQEAHGSVFWHPKGYRIWRELEAYMRRAID 293 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADR-------------NDKAMIYGPT 109 TG E+ P + A W +SG + Y + M + D + + M P Sbjct: 294 ATGYREVKTPQVMDARQWEQSGHWGKYRENMFVIPDEVPNTEDEGPLVSDDAQWMALKPM 353 Query: 110 HEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPE 168 + IFR IKSYR+LP FY+ R+E G+MR R+F DA+ F + Sbjct: 354 NCPAHVLIFRQGIKSYRDLPLRFYENGCCHRNEPHGALHGLMRVRQFTQDDAHIFCREDQ 413 Query: 169 GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFM 228 + RI+ G + P + E A+ + Sbjct: 414 IVEE-VRAFCELADRIYKDFGFTYSI-KLALRPEKRFGTEEMWDQAEEELRNAVVAAGLA 471 Query: 229 DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIF 288 E + A YA + H L D++ +V + Sbjct: 472 TEQYGWEE------------LPGEGAFYAPKLEWH---LTDAIGRTWQVGTIQSDRVLP- 515 Query: 289 YFGTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 + A++ G DG+ H + G+ ++ + G+ +W V Sbjct: 516 -------ERLDASYIGEDGERHRPIMLHRAIFGSYERFIGILIEHYAGRFPVWLAPVQAV 568 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 +++ E+ A+L+ G V D E+I + + P+ ++VG Sbjct: 569 VATIV------SDADGYAEEAAAKLAAAGIRVETDLRNEKINYKVREHSVAKVPVLLVVG 622 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 + + KV ++ + +E M+L+E I Sbjct: 623 KREAEEGKVAVRRLGSQAQEVMTLDEAIATLRGE 656 >gi|29833364|ref|NP_827998.1| threonyl-tRNA synthetase [Streptomyces avermitilis MA-4680] gi|73919829|sp|Q827U8|SYT_STRAW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|29610487|dbj|BAC74533.1| putative threonyl-tRNA synthetase [Streptomyces avermitilis MA-4680] Length = 658 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 71/440 (16%), Positives = 136/440 (30%), Gaps = 38/440 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD ++L L + + Q G+ + P G + R G + Sbjct: 254 EAEKRDHRKLGNELDLFS-IPDQIGSGLAVFHPKGGIVRRVMEDYSRRRHEEEGYEFVYT 312 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P L+ SG D Y M P + + IF + +SYR LP Sbjct: 313 PHATKGKLFETSGHLDWYADGMYPPMQLDEGVDYYLKPMNCPMHNLIFDARGRSYRELPL 372 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 ++ +R E G+ R+R F DA+ + + + +K L + G Sbjct: 373 RLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREKMADEL-DKTLTFVLNLLRDYG 431 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 L + + + S + + + + Sbjct: 432 LTDFYLELST----------------KDPEKFVGSDEVWEEATETLRQVAEKQGLPLVPD 475 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y + + D++ ++S ++ F ++ + G DG Sbjct: 476 PGGAAFYGPKI---SVQAKDAIGRTWQMSTVQLD----FNLPERFD----LEYTGPDGSK 524 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + G++ AV+ + +P +AP + I I + +K Sbjct: 525 QRPVMIHRALFGSIERFFAVLL---EHYAGAFPAWLAPVQAVGIPIG---DAHVEYLQKF 578 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 A K G V D +++ + A P VI G + ++ V ++R Sbjct: 579 AAEAKKKGLRVEVDSSSDRMQKKIRNAQKQKVPFMVIAGDEDMTAGAVSFRYRDGSQENG 638 Query: 429 MSLEEVINYASHRFSNNRPV 448 + L+E I + V Sbjct: 639 IPLDEAIAKIAKVVEERTQV 658 >gi|254383626|ref|ZP_04998976.1| threonyl-tRNA synthetase [Streptomyces sp. Mg1] gi|194342521|gb|EDX23487.1| threonyl-tRNA synthetase [Streptomyces sp. Mg1] Length = 658 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 65/440 (14%), Positives = 139/440 (31%), Gaps = 38/440 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD ++L L + + G+ + P G + R G + Sbjct: 254 EAEKRDHRKLGNELDLFSV-PDEIGSGLAVFHPRGGIIRRTMEDYSRRRHEEEGYEFVYT 312 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P L+ +SG D Y + M P + + IF + +SYR LP Sbjct: 313 PHATKGALFEKSGHLDWYAEGMYPPMQLDGGTDYYLKPMNCPMHNLIFDARGRSYRELPL 372 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 ++ +R E G+ R+R F DA+ + + ++ ++ L + G Sbjct: 373 RLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQMAEEL-DRTLTFVLNLLRDYG 431 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 L + + + S + + + Sbjct: 432 LTDFYLELST----------------KDPEKFVGSDEAWEEATAVLAQVAEKQGLPLVPD 475 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y + + D++ ++S ++ F ++ + + DG Sbjct: 476 PGGAAFYGPKI---SVQCKDAIGRTWQMSTVQLD----FNLPERF----NLEYTAPDGSR 524 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + G++ AV+ + P +AP + I I + ++ Sbjct: 525 QRPVMIHRALFGSIERFFAVLL---EHYAGAMPPWLAPVQAVGIPIGDGH---VEYLQEF 578 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 A K G V D +++ + L P +IVG + ++ V ++R Sbjct: 579 AAEAKKQGLRVEVDASSDRMQKKIRNHQKLKVPFMIIVGDEDMAAGTVSFRYRDGSQENG 638 Query: 429 MSLEEVINYASHRFSNNRPV 448 ++ +E + + ++ V Sbjct: 639 IAKDEALAKLAKVVADRVQV 658 >gi|281419389|ref|ZP_06250404.1| prolyl-tRNA synthetase [Clostridium thermocellum JW20] gi|281407009|gb|EFB37272.1| prolyl-tRNA synthetase [Clostridium thermocellum JW20] Length = 572 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 117/267 (43%), Positives = 159/267 (59%), Gaps = 6/267 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S F L+E P +AEIASH+LMLR G++ + + GIYS+LPLG + + I+REE Sbjct: 1 MRVSNMFFQTLREVPAEAEIASHQLMLRAGLMRKLASGIYSFLPLGYRVFRKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ + L A+ + SGR++ +G EM RL DRN + GPTHEE+ T+ +S Sbjct: 61 MDRAGAQELIMSALLPAESYQASGRWEVFGAEMFRLKDRNGRDFCLGPTHEEIFTETVKS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SYR+LP YQIQ K+RDE RPRFGVMRSREF+MKDAYSFD G SY KM+ + Sbjct: 121 VTRSYRSLPLILYQIQTKYRDERRPRFGVMRSREFVMKDAYSFDRDEAGLDISYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS------ 234 Y RIF RLGL I + A++G +GG S EF+V + GE+++ + Sbjct: 181 YCRIFDRLGLDYIIVDADTGAMGGSGSQEFMVKSAVGESRIAYCEACGYAANDEKAECVP 240 Query: 235 ENTDFDDIISLNSIVEQWTAPYAATSD 261 E D +E+ P T + Sbjct: 241 EKCCDDKECCGELGLEKVATPDVRTIE 267 Score = 164 bits (414), Expect = 4e-38, Method: Composition-based stats. Identities = 70/188 (37%), Positives = 100/188 (53%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 D+ K D+ P+ GIEVGHIF GTKYS + + GK+ + MG Sbjct: 382 VKDIRTIKEGDACPKCGAPVKVEFGIEVGHIFKLGTKYSEALDCIYLDETGKERPMIMGC 441 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R +AAVIE ++D GIIWP S+AP+ + +I + D V + EKIY +L ++G Sbjct: 442 YGIGINRSMAAVIEQNNDENGIIWPISIAPYHVIVIPVNTTDSVQMELAEKIYTQLGEMG 501 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G +F ADL+G P+++ VG + + VE K R + EE I Sbjct: 502 IEVLLDDRDERPGVKFKDADLIGIPIRITVGKR-AGEGIVEYKLRREKDFAAIPYEEAIA 560 Query: 437 YASHRFSN 444 A + Sbjct: 561 KAKKEVAE 568 >gi|169347105|ref|ZP_02866047.1| threonyl-tRNA synthetase [Clostridium perfringens C str. JGS1495] gi|169296788|gb|EDS78917.1| threonyl-tRNA synthetase [Clostridium perfringens C str. JGS1495] Length = 643 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 82/444 (18%), Positives = 153/444 (34%), Gaps = 35/444 (7%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L + T +G+ +P G + + + I +E+ R G Sbjct: 229 YLEALEEAKKRDHNKLGRELGIFTT-DENVGQGLPLLMPKGARIIQTLQRWIEDEEQRRG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA--MIYGPTHEEVMTDIFRSHIK 123 + P + +DL+ SG +D Y M L D + P I+ S Sbjct: 288 YVLTKTPLMAKSDLYKISGHWDHYKDGMFVLGDEEKDSEVFALRPMTCPFQYAIYNSTQH 347 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP F + FR+E G++R R+F + D + TPE + + Sbjct: 348 SYRDLPVRFAETSTLFRNESSGEMHGLIRVRQFTLADGHIVC-TPEQLEDEFKNTVDLVK 406 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + LG I D+++ F + + + + + Sbjct: 407 YVMETLG------------IADDITYRFSKWDPNNTEKYINDPEAWENTQNIMREILNHL 454 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + + A Y D+ + + + + I+ FG + Sbjct: 455 NIDFTEADDEAAFYGPKLDIQFKNVH---GKEDTIITIQIDFALAERFG--------MYY 503 Query: 303 KGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 DG+ + IG A++ + P +AP + ++ + Sbjct: 504 IDKDGEKKRPYIIHRSSIGCYERTLAMLI---EKYAGALPTWIAPVQAKVLPLSDK---Y 557 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ L + G V D E+IG + A L P ++VG K + +V ++ R Sbjct: 558 ADYANEVVEELRRRGVRVEADHRAEKIGYKIREARLERTPYILVVGEKEAENKEVSVRSR 617 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 G M L + +N +N Sbjct: 618 KNGEEGAMPLADFVNRIVLEIANR 641 >gi|110802298|ref|YP_699583.1| threonyl-tRNA synthetase [Clostridium perfringens SM101] gi|123047184|sp|Q0SQM4|SYT_CLOPS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|110682799|gb|ABG86169.1| threonine--tRNA ligase [Clostridium perfringens SM101] Length = 643 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 82/444 (18%), Positives = 153/444 (34%), Gaps = 35/444 (7%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L + T +G+ +P G + + + I +E+ R G Sbjct: 229 YLEALEEAKKRDHNKLGRELGIFTT-DENVGQGLPLLMPKGARIIQTLQRWIEDEEQRRG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA--MIYGPTHEEVMTDIFRSHIK 123 + P + +DL+ SG +D Y M L D + P I+ S Sbjct: 288 YVLTKTPLMAKSDLYKISGHWDHYKDGMFVLGDEEKDSEVFALRPMTCPFQYAIYNSTQH 347 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP F + FR+E G++R R+F + D + TPE + + Sbjct: 348 SYRDLPVRFAETSTLFRNESSGEMHGLIRVRQFTLADGHIVC-TPEQLEDEFKNTVDLVK 406 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + LG I D+++ F + + + + + Sbjct: 407 YVMETLG------------IADDITYRFSKWDPNNTEKYINDPEAWENTQNIMREILNHL 454 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + + A Y D+ + + + + I+ FG + Sbjct: 455 NIDFTEADDEAAFYGPKLDIQFKNVH---GKEDTIITIQIDFALAERFG--------MYY 503 Query: 303 KGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 DG+ + IG A++ + P +AP + ++ + Sbjct: 504 IDKDGEKKRPYIIHRSSIGCYERTLAMLI---EKYAGALPTWIAPVQAKVLPLSDK---Y 557 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ L + G V D E+IG + A L P ++VG K + +V ++ R Sbjct: 558 ADYANEVVEELRRRGVRVEADHRAEKIGYKIREARLERTPYILVVGEKEAENKEVSVRSR 617 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 G M L + +N +N Sbjct: 618 KNGEEGAMPLADFVNRIVLEIANR 641 >gi|18311304|ref|NP_563238.1| threonyl-tRNA synthetase [Clostridium perfringens str. 13] gi|110801319|ref|YP_697012.1| threonyl-tRNA synthetase [Clostridium perfringens ATCC 13124] gi|168205151|ref|ZP_02631156.1| threonyl-tRNA synthetase [Clostridium perfringens E str. JGS1987] gi|168210374|ref|ZP_02635999.1| threonyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] gi|168213233|ref|ZP_02638858.1| threonyl-tRNA synthetase [Clostridium perfringens CPE str. F4969] gi|168216713|ref|ZP_02642338.1| threonyl-tRNA synthetase [Clostridium perfringens NCTC 8239] gi|182625789|ref|ZP_02953556.1| threonyl-tRNA synthetase [Clostridium perfringens D str. JGS1721] gi|22654117|sp|Q8XI02|SYT_CLOPE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123148532|sp|Q0TMX8|SYT_CLOP1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|18145987|dbj|BAB82028.1| threonine-tRNA ligase [Clostridium perfringens str. 13] gi|110675966|gb|ABG84953.1| threonyl-tRNA synthetase [Clostridium perfringens ATCC 13124] gi|170663286|gb|EDT15969.1| threonyl-tRNA synthetase [Clostridium perfringens E str. JGS1987] gi|170711530|gb|EDT23712.1| threonyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] gi|170715283|gb|EDT27465.1| threonyl-tRNA synthetase [Clostridium perfringens CPE str. F4969] gi|177908945|gb|EDT71432.1| threonyl-tRNA synthetase [Clostridium perfringens D str. JGS1721] gi|182381219|gb|EDT78698.1| threonyl-tRNA synthetase [Clostridium perfringens NCTC 8239] Length = 643 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 82/444 (18%), Positives = 153/444 (34%), Gaps = 35/444 (7%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L + T +G+ +P G + + + I +E+ R G Sbjct: 229 YLEALEEAKKRDHNKLGRELGIFTT-DENVGQGLPLLMPKGARIIQTLQRWIEDEEQRRG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA--MIYGPTHEEVMTDIFRSHIK 123 + P + +DL+ SG +D Y M L D + P I+ S Sbjct: 288 YVLTKTPLMAKSDLYKISGHWDHYKDGMFVLGDEEKDSEVFALRPMTCPFQYAIYNSTQH 347 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP F + FR+E G++R R+F + D + TPE + + Sbjct: 348 SYRDLPVRFAETSTLFRNESSGEMHGLIRVRQFTLADGHIVC-TPEQLEDEFKNTVDLVK 406 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + LG I D+++ F + + + + + Sbjct: 407 YVMETLG------------IADDITYRFSKWDPNNTEKYINDPEAWENTQNIMREILNHL 454 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + + A Y D+ + + + + I+ FG + Sbjct: 455 NIDFTEADDEAAFYGPKLDIQFKNVH---GKEDTIITIQIDFALAERFG--------MYY 503 Query: 303 KGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 DG+ + IG A++ + P +AP + ++ + Sbjct: 504 IDKDGEKKRPYIIHRSSIGCYERTLAMLI---EKYAGALPTWIAPVQAKVLPLSDK---Y 557 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++ L + G V D E+IG + A L P ++VG K + +V ++ R Sbjct: 558 ADYANEVVEELRRRGVRVEADHRAEKIGYKIREARLERTPYILVVGEKEAENKEVSVRSR 617 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 G M L + +N +N Sbjct: 618 KNGEEGAMPLADFVNRIVLEIANR 641 >gi|255507180|ref|ZP_05382819.1| threonyl-tRNA synthetase [Chlamydia trachomatis D(s)2923] gi|289525626|emb|CBJ15104.1| threonyl-tRNA synthetase [Chlamydia trachomatis Sweden2] gi|296435188|gb|ADH17366.1| threonyl-tRNA synthetase [Chlamydia trachomatis E/150] gi|296438907|gb|ADH21060.1| threonyl-tRNA synthetase [Chlamydia trachomatis E/11023] Length = 635 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 72/445 (16%), Positives = 140/445 (31%), Gaps = 42/445 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++ + + RD + KL L + S G+ + P G + + + Sbjct: 223 LKEHLHQLEEAKKRDHRVLGTKLDLFSQ--QTCSAGMPFFHPRGMVVWNALVDYWKRLHQ 280 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 R G ++ P L + +LW SG +++Y + M L +++ P + +++ + Sbjct: 281 RAGYQQIQTPQLMNRELWEISGHWENYKENMYTLT-VDEEDYAIKPMNCPGCMLYYKTQL 339 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR P +I R EL G+MR R F DA+ LTPE + + Sbjct: 340 HSYREFPLRIAEIGHVHRHELSGALSGLMRVRTFHQDDAH-VFLTPEQVEEETLNILNLV 398 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ GL+ + + P E S D + + Sbjct: 399 SELYGTFGLEY-HLELSTRP----------------EQGTIGSDDLWELATEALKRALVK 441 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I A Y D+H K R + G I Sbjct: 442 SQKPFIISPGEGAFYGPKIDIHV----------KDAINRTWQCGTI-QLDMFLPERFDLK 490 Query: 302 FKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + A G+ M + R + +IE + Sbjct: 491 YTNAQGEKSTPIMLHRALFGSIERFLGILIEHFKGRFPLWLSPEHVRIITVA-------D 543 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +++ S++G V D E + + A + + +G K + + ++ Sbjct: 544 RHEARAQELAKHFSQMGIIVSVDSSNESVSKKIRNAQNMQVNYMITIGDKELETHLLAVR 603 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 R + D+++E+ + + Sbjct: 604 IRDNRVLNDIAVEQFSHVILEELRS 628 >gi|225424719|ref|XP_002265302.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296086530|emb|CBI32119.3| unnamed protein product [Vitis vinifera] Length = 686 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 76/443 (17%), Positives = 157/443 (35%), Gaps = 38/443 (8%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R +Y I + D + K L H S G + +LP G + + + I+ + Sbjct: 278 RLKEYIARIEEAKKYDHRLLGVKQELF--FCHPLSPGSWFFLPHGGRIYNKLMEFIKAQY 335 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G E+ PT+ + LW SG +Y + M + + + P + +F Sbjct: 336 RERGYHEVFSPTMYNMQLWETSGHAANYKENMF-VFEVEKQEFGLKPMNCPGHCLMFEHR 394 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP + R+E G+ R R F DA+ F K + Sbjct: 395 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCR-ESQIKDEVMGVLEF 453 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++ G ++ + P + + + + D Sbjct: 454 INYAYNIFGFTYE-LKLSTRP-----------------EKYLGDLETWEKAEAALTEALD 495 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I E A Y D+ + D+L + + ++ F +++ L SA Sbjct: 496 QSGKPWEINEGDGAFYGPKIDI---SVSDALSRKFQCATLQLD----FQLPSRFDLSYSA 548 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 ++ V + +G++ + A++ + WP ++P + + + Q Sbjct: 549 E--DEAKRERPVMIHRAILGSVERMFAILL---EHYKGKWPFWLSPRQAIVCPVSEKSQ- 602 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 K+ ++ + G V D +I + A L + ++VG + + +V ++ Sbjct: 603 --PYALKVRDQIHQAGYYVDVDTTDRKIQKKVREAQLAQYNYILVVGEEEANTGQVSVRV 660 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R G MS+E ++++ + Sbjct: 661 RDKGDHSVMSMENLLSFFKSEIA 683 >gi|256005276|ref|ZP_05430242.1| prolyl-tRNA synthetase [Clostridium thermocellum DSM 2360] gi|255990712|gb|EEU00828.1| prolyl-tRNA synthetase [Clostridium thermocellum DSM 2360] gi|316939553|gb|ADU73587.1| prolyl-tRNA synthetase [Clostridium thermocellum DSM 1313] Length = 572 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 117/267 (43%), Positives = 159/267 (59%), Gaps = 6/267 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S F L+E P +AEIASH+LMLR G++ + + GIYS+LPLG + + I+REE Sbjct: 1 MRVSNMFFQTLREVPAEAEIASHQLMLRAGLMRKLASGIYSFLPLGYRVFRKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ + L A+ + SGR++ +G EM RL DRN + GPTHEE+ T+ +S Sbjct: 61 MDRAGAQELIMSALLPAESYQASGRWEVFGAEMFRLKDRNGRDFCLGPTHEEIFTETVKS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SYR+LP YQIQ K+RDE RPRFGVMRSREF+MKDAYSFD G SY KM+ + Sbjct: 121 VTRSYRSLPLILYQIQTKYRDERRPRFGVMRSREFVMKDAYSFDRDEAGLDISYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS------ 234 Y RIF RLGL I + A++G +GG S EF+V + GE+++ + Sbjct: 181 YCRIFDRLGLDYIIVDADTGAMGGSGSQEFMVKSAVGESRIAYCEACGYAANDEKAECVP 240 Query: 235 ENTDFDDIISLNSIVEQWTAPYAATSD 261 E D +E+ P T + Sbjct: 241 EKCCDDKECCGELGLEKVATPDVRTIE 267 Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 70/188 (37%), Positives = 100/188 (53%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 D+ K D+ P+ GIEVGHIF GTKYS + + GK+ + MG Sbjct: 382 VKDIRTIKEGDACPKCGAPVKVEFGIEVGHIFKLGTKYSEALDCIYLDETGKERPMIMGC 441 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R +AAVIE ++D GIIWP S+AP+ + +I + D V + EKIY +L ++G Sbjct: 442 YGIGINRSMAAVIEQNNDENGIIWPISIAPYHVIVIPVNTTDSVQMELAEKIYTQLGEMG 501 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G +F ADL+G P+++ VG + + VE K R + EE I Sbjct: 502 IEVLLDDRDERPGVKFKDADLIGIPIRITVGKR-AGEGIVEYKLRREKDFAAIPYEEAIA 560 Query: 437 YASHRFSN 444 A + Sbjct: 561 KAKEEVAE 568 >gi|83951679|ref|ZP_00960411.1| threonyl-tRNA synthetase [Roseovarius nubinhibens ISM] gi|83836685|gb|EAP75982.1| threonyl-tRNA synthetase [Roseovarius nubinhibens ISM] Length = 648 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 80/445 (17%), Positives = 149/445 (33%), Gaps = 45/445 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD ++ L + + + G W P G + +R Q Sbjct: 234 KAHLHMLEEAAKRDHRKLGREMDLF--HMQEEAPGQVFWHPNGWTIYTELQDYMRRAQRA 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G +E++ P + LW +SG ++ Y + M + R P + IF Sbjct: 292 GGYVEVNTPQVVDRKLWEKSGHWEKYQEHMFIVEVDEEHAREKAVNALKPMNCPCHVQIF 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E GVMR R F D + F + + + Sbjct: 352 NQGLKSYRDLPLRMAEFGSCNRYEPSGALHGVMRVRGFTQDDGHIFCREDQIESET-KRF 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 R++ LG ++ ++ P S E A+T + + Sbjct: 411 IDFLSRVYRDLGFENFSVKFSDRPEKRSGSDEVWDKAET-----------------ALKS 453 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + ++ A Y + L D++ + + ++ F + Sbjct: 454 ATEAANCSFTLNPGEGAFYGPKLEF---VLTDAIGRDWQCGTLQVD----FVLPER---- 502 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + AT+ G DG H + +G+ ++ H GK W S++ Sbjct: 503 LDATYIGEDGAKHRPVMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASIV---- 558 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++ A L G D E+I + + P+ + G + V + V Sbjct: 559 --SEADDYVHEVVAGLRAQGVRAEADIRNEKINYKVREHSVGKVPVILACGLREVEEKTV 616 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ +L +V + Sbjct: 617 SVRRLGEKQTSVQALADVTKALATE 641 >gi|299783724|gb|ADJ41722.1| Threonyl-tRNA synthase [Lactobacillus fermentum CECT 5716] Length = 601 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 72/440 (16%), Positives = 150/440 (34%), Gaps = 36/440 (8%) Query: 10 ILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + RD + ++L L + + G+ W+P G + + +++ G Sbjct: 190 RQEARERDHRVIGNQLDLF--FVDPKVGAGLPYWMPKGSTIRRTIERYVIDKEVGDGYEH 247 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRN 127 + P L + + + SG +D Y ++M D D + P + I++ HI+SYR Sbjct: 248 VYTPVLMNLNAYKTSGHWDHYREDMFPPMDMGDGELLELRPMNCPSHIQIYKHHIRSYRE 307 Query: 128 LPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP ++ + R E G+ R RE + D ++F + + K+ + ++ Sbjct: 308 LPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIQDE-FAKILKLIMDVYK 366 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 + R + F + + + D + Sbjct: 367 DFNINDYTFRLS-------------YRDPKNTEKYFANDEMWERSQSMLKAAMDSMGLDY 413 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y D+ + +L ++ +S ++ F K+ L + G D Sbjct: 414 YEAEGEAAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPEKFDLH----YVGED 462 Query: 307 GKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 GK H + +G M A + + G W + I D+ D Sbjct: 463 GKQHRPIMIHRGVVGTMERFVAYLTEIYKGAFPTWLA-----PNQVNIIPVSDEKHGDYA 517 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 + + D E++G + + P ++VG V++ V ++ Sbjct: 518 DDLAREFRAAQLRTVVDHRSEKMGYKIRESQTQKVPYTLVVGEDEVANGTVSVRKYGEKD 577 Query: 426 REDMSLEEVINYASHRFSNN 445 + MS ++ ++ H + Sbjct: 578 QVSMSKQDFLDLILHDVATY 597 >gi|114769524|ref|ZP_01447150.1| threonyl-tRNA synthetase [alpha proteobacterium HTCC2255] gi|114550441|gb|EAU53322.1| threonyl-tRNA synthetase [alpha proteobacterium HTCC2255] Length = 649 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 147/445 (33%), Gaps = 45/445 (10%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD ++ L + + + G W P G K + +R Q++ Sbjct: 234 KAHLTMLEEAALRDHRKLGREMDLF--HMQEEAPGQIFWHPNGWKIYTALQDYMRRMQDK 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIY-----GPTHEEVMTDIF 118 G +E++ P + LW SG ++ Y + M + D A P + IF Sbjct: 292 NGYVEVNTPQVVDRKLWEASGHWEKYQENMFIVEVDEDHAREKAVNALKPMNCPCHVQIF 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F D + F + + Sbjct: 352 NQGLKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCSEEQIESET-KIY 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 ++ LG ++ P S E D + + Sbjct: 411 IDFLSNVYKDLGFNEFKVKFSDRPEKRSGSDE-----------------VWDKAEKALLS 453 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + A Y + L D++ + + ++ F + Sbjct: 454 ATRAAGIEPELNIGEGAFYGPKLEF---VLTDAIGRDWQCGTHQVD----FVLPER---- 502 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + A++ G DG H + +G+ ++ SH GK W S++ Sbjct: 503 LDASYIGKDGDKHRPVMLHRATLGSFERFIGILIESHAGKLPFWLAPRQVVVASIV---- 558 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D + A L+ G D E+I + L P+ + VG++ V + V Sbjct: 559 --SDANDYVLEKVAALNTAGIRAEADIRNEKINYKVREHSLGKVPVILAVGAREVEEDTV 616 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 ++ E ++I S Sbjct: 617 TVRRLGQKQTEVNQFNDIIAILSSE 641 >gi|169836558|ref|ZP_02869746.1| prolyl-tRNA synthetase [candidate division TM7 single-cell isolate TM7a] Length = 282 Score = 227 bits (578), Expect = 4e-57, Method: Composition-based stats. Identities = 131/278 (47%), Positives = 173/278 (62%), Gaps = 3/278 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK FL +E P++AE+ SHKLMLR MI Q ++G+YS+LPLG K L + I+REE Sbjct: 1 MRLSKAFLKTYKEAPKEAEVISHKLMLRASMIRQLTRGVYSYLPLGYKVLKKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ +P LQ A LW ESGR+ +YG E++R+ DRN++ GPTHEEV+TDI R+ Sbjct: 61 MDRAGSQEILMPVLQPASLWEESGRWFAYGSELMRMKDRNEREFALGPTHEEVVTDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LPF YQIQ KFRDE+RPRFG+MR REFLMKDAYSF LT E + M + Sbjct: 121 TITSYKELPFNLYQIQTKFRDEMRPRFGLMRGREFLMKDAYSFHLTKESLDEEFLNMKNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--D 238 Y RI R+ LK + A+SG IGGD S+EF+VLA+ GE + S D+ E Sbjct: 181 YSRILERMELKFRAVDADSGSIGGDASNEFMVLAENGEDDILYSDS-SDYAANVEKATSI 239 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 + S + + T + F ++PE K Sbjct: 240 IELKESSEEKLPKELVETPNTKTIKELSEFLNIPEEKL 277 >gi|84501632|ref|ZP_00999804.1| Threonyl-tRNA synthetase, class IIa [Oceanicola batsensis HTCC2597] gi|84390253|gb|EAQ02812.1| Threonyl-tRNA synthetase, class IIa [Oceanicola batsensis HTCC2597] Length = 659 Score = 227 bits (578), Expect = 4e-57, Method: Composition-based stats. Identities = 80/456 (17%), Positives = 147/456 (32%), Gaps = 56/456 (12%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD ++ L + + + G W P G + +R +Q Sbjct: 234 KAHLNMLEEAAKRDHRKLGREMGLF--HMQEEAPGQVFWHPNGWTIYTTLQDYVRRKQRA 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA--DRNDKAMIY--------------G 107 G E++ P + LW SG ++ Y M + + D Sbjct: 292 GGYNEINTPQVVDRKLWEASGHWEKYQHHMFIVEVDESRDGEHDDAAAKSREHTRINALK 351 Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLT 166 P + +F +KSYR+LP + R E G+MR R F DA+ F T Sbjct: 352 PMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCARFEPSGALHGIMRVRGFTQDDAHIFC-T 410 Query: 167 PEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 E + + I+ LG +R + P + E Sbjct: 411 EEQIQEECARFIDFLADIYRELGFPEFEIRFATRPEKRVGTEE----------------- 453 Query: 227 FMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGH 286 D+ + + A Y D + L D++ + ++ Sbjct: 454 SWDYVEGALENAIKATGHDYVLEPGDGAFYGPKLDFY---LTDAIGRVWQCGTFQVDPNL 510 Query: 287 IFYFGTKYSLPMSATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 + A + ADG+ H + +G+ ++ +H GK +W Sbjct: 511 P--------ERLDAGYIAADGERHRPFMLHRAVLGSFERFIGILIENHAGKLPLWLAPRQ 562 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405 +++ D C ++ A+L G D E+I + + P + Sbjct: 563 VVVAAIV------SDADDYCREVVAKLQAAGIRAETDLRNEKINYKVREHSVGKVPYILA 616 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 G K V + V ++ +L+E+++ Sbjct: 617 CGMKEVEERTVSVRKLGEKQTSGATLDEIVDRLRTE 652 >gi|163746007|ref|ZP_02153366.1| threonyl-tRNA synthetase [Oceanibulbus indolifex HEL-45] gi|161380752|gb|EDQ05162.1| threonyl-tRNA synthetase [Oceanibulbus indolifex HEL-45] Length = 648 Score = 227 bits (578), Expect = 4e-57, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 144/444 (32%), Gaps = 45/444 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + L +L+E RD ++ L + + + G W P G + +R +Q + Sbjct: 234 RAHLNMLEEAAKRDHRKLGREMDLF--HMQEEAPGQIFWHPNGWSIYTQLQDYMRRQQRK 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G +E++ P + LW SG ++ Y M + R P + IF Sbjct: 292 GGYVEVNTPQVVDRKLWEASGHWEKYQDHMFIVEVDEEHAREKAVNALKPMNCPCHVQIF 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F D + F + + K Sbjct: 352 NQGLKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCA-EDQIEAETAKF 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 I+ LG ++ ++ P S E D + + Sbjct: 411 IAFLSEIYRDLGFENFKVKFSDRPEKRSGSDE-----------------VWDKAEAALLS 453 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + A Y + L D++ + + ++ F + Sbjct: 454 ATRAAGIEPELNPGEGAFYGPKLEF---VLTDAIGRDWQCGTHQVD----FVLPER---- 502 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + AT+ GADG H + +G+ ++ H GK W S+ Sbjct: 503 LDATYIGADGGKHRPVMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASIT---- 558 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++ L G D E+I + + P+ + VG++ V + V Sbjct: 559 --SEADDYVAEVVETLKAAGVRAEADMRNEKINYKVREHSVGKVPVILAVGAREVEERTV 616 Query: 417 EIKHRLTGIREDMSLEEVINYASH 440 ++ L+ + + Sbjct: 617 SVRRLGQKQTSVQPLDTLTAELAQ 640 >gi|307266366|ref|ZP_07547904.1| prolyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1] gi|306918602|gb|EFN48838.1| prolyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1] Length = 570 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 116/255 (45%), Positives = 161/255 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +AEI SH LML+ ++ + + G+Y +LPLGQ+ L V I+REE Sbjct: 1 MRLSQLLVPTLREIPAEAEIPSHILMLKAALMRKLASGVYIYLPLGQRVLRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ + L A+L ESGR+D +G EM +L DRN++ GPTHEEV TD+ R+ Sbjct: 61 MDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFKLKDRNERDFCLGPTHEEVFTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE RPRFGVMRSREF+MKDAYSFD+ EG S+NKM+ + Sbjct: 121 EVKSYRQLPLILYQIQTKFRDERRPRFGVMRSREFIMKDAYSFDVDWEGLDKSFNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK + + A+SG +GG S EF+V++ GE + + + Sbjct: 181 YCRIFDRCGLKYLVVEADSGAMGGKDSKEFMVISGVGEAVIAYCDNCGYAANEEKAECLI 240 Query: 241 DIISLNSIVEQWTAP 255 + ++ + Sbjct: 241 NQEIDEEMLPKEKVY 255 Score = 173 bits (438), Expect = 6e-41, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 101/190 (53%), Gaps = 3/190 (1%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P RGIEVGHIF GTKYS + A + +G + + MG Sbjct: 381 VVADIKNVIEGDKCPRCGSPLKIDRGIEVGHIFKLGTKYSDALGAKYVDEEGNEKPIIMG 440 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R VAA+IE HD KGIIWP SVAP+ + ++ + ++ E IYA L K Sbjct: 441 CYGIGINRTVAAIIEQHHDEKGIIWPMSVAPYHVIIVPVNVSNEAQNRVAEDIYAALQKE 500 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD + G +F ADLLG P+++ VG K V D VEIK R E++ + +V+ Sbjct: 501 GIEVLIDDRDLRAGVKFNDADLLGIPIRITVGKK-VDDGIVEIKLREKEEAEEVKISDVV 559 Query: 436 NYASHRFSNN 445 + Sbjct: 560 EKVKNIIKEK 569 >gi|212550461|ref|YP_002308778.1| threonyl-tRNA synthetase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|229470721|sp|B6YQ95|SYT_AZOPC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|212548699|dbj|BAG83367.1| threonyl-tRNA synthetase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 648 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 150/445 (33%), Gaps = 36/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+Y + + RD ++ L T H+ +G+ WLP G + + ++ Q Sbjct: 229 LSEYLALMEKAKKRDHRRIGKEMELFT-FSHKVGRGLPLWLPKGTQLRLRLEDFLKRIQK 287 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRN--DKAMIYGPTHEEVMTDIFRS 120 + G ++ P + + L++ SG Y YGK+ + + + P + +I+++ Sbjct: 288 KYGYQQVITPHIGNKTLYIASGHYAKYGKDSFQPIHTPELGEEFLLKPMNCPHHCEIYKA 347 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 ++SY+ LP + +R E G+ R R F DA+ F + + + Sbjct: 348 FLRSYKELPLRLAEFGTVYRYERSGELQGLTRVRGFTQDDAHIFCSPEQVKEELIK-VID 406 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 IF L ++ + + S++ + Sbjct: 407 IVRVIFCALNFNDYEVQISLRDLN-------------NRIKYIGSEENWKNSEGAIIEVC 453 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + I A Y D + D+L N ++ ++ Sbjct: 454 QEKKIKAKIKLGEAAFYGPKLDFM---VKDALGRNWQLGTIQVDYNLP--------ERFE 502 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + GAD + H + G+M AV+ GK +W S + + Sbjct: 503 LEYVGADNQKHRPVMIHRAPFGSMERFVAVMIEHTGGKFPLWLVSDQVVILPV------S 556 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + E+I K V D E++G + +L P +I+G K +S++ + Sbjct: 557 ENYNQYAEEIAKEFHKRDIRVTIDKRNEKVGRKIRDNELKKIPYLLIIGEKERRNSEISV 616 Query: 419 KHRLTGIREDMSLEEVINYASHRFS 443 + M + E + Sbjct: 617 RKHGKENIGIMKVTEFAEFLKKEVE 641 >gi|224438525|ref|ZP_03659445.1| threonyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818] gi|313144952|ref|ZP_07807145.1| threonyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818] gi|313129983|gb|EFR47600.1| threonyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818] Length = 603 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 83/442 (18%), Positives = 161/442 (36%), Gaps = 38/442 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD ++ L T + G+ WLP G + N+ ++ N G Sbjct: 198 YLFAIEEAKKRDHRKLGQEMGLFT-FDEEIGAGLPIWLPKGARLRQNLERLLTIALNERG 256 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W +SG YD+Y + M +++ P + +++S +SY Sbjct: 257 YEPVRGPEILKSDVWKKSGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSSPRSY 315 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP FY+ + R E G++R REF DA+ F T + +S+ + Sbjct: 316 RELPLRFYEYGIVHRHEKSGVLHGLLRVREFTQDDAHIFCQTNQIKDE--VNHIISFTKS 373 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + M + P + + + + ++ Sbjct: 374 ILDAFNFAYEMELSTRP-----------------DKSIGNDGVWESATNALKNALEENKI 416 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Y+ +A + Sbjct: 417 AYQIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVDMNLPERFALSYTDENNAQVQ- 472 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 V + +G+ A++ G+ ++ +AP ++ LI I Sbjct: 473 ------PVMIHRAILGSFERFVAILTEHFAGEFPLF---IAPTQVILIPIG---DAQLGY 520 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ + K+G D E + + +A+ PL V++G+K V + I+ R Sbjct: 521 ARELRNEIIKIGGYAEIMDKNESLNKKIRLAEKQKVPLIVVIGAKEVERKILAIRDRREK 580 Query: 425 IREDMSLEEVINYASHRFSNNR 446 + +S E I + R Sbjct: 581 AQYGLSQAEFITTLKTKIGEIR 602 >gi|20808685|ref|NP_623856.1| prolyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4] gi|81848077|sp|Q8R7S9|SYP_THETN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|20517322|gb|AAM25460.1| Prolyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4] Length = 573 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 116/247 (46%), Positives = 157/247 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P DAEI SH LML+ G++ + + GIY +LPLG++ L V I+REE Sbjct: 1 MRLSQLLMPTLREVPADAEIPSHVLMLKAGLMRKLAAGIYVYLPLGKRVLKKVEEIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ + L A+L+ E+GR+D +G EM +L DRN++ GPTHEEV TD+ R+ Sbjct: 61 MDREGSQEVLMSALIPAELFKETGRWDVFGPEMFKLKDRNERDFCLGPTHEEVFTDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE RPRFGVMRSREF+MKDAYSFD EG S+NKM+ + Sbjct: 121 EVKSYRQLPLILYQIQTKFRDERRPRFGVMRSREFIMKDAYSFDADWEGLDESFNKMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK + + A+ G +GG S EF+V++ GE + + Sbjct: 181 YCRIFDRCGLKYLVVEADPGAMGGRDSKEFMVISSVGEAVIAYCDSCGYAANEEKAECLI 240 Query: 241 DIISLNS 247 + Sbjct: 241 ESRDEEM 247 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 69/163 (42%), Positives = 95/163 (58%), Gaps = 3/163 (1%) Query: 259 TSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ + D P ARGIEVGHIF GTKYS + AT+ +G + + MG Sbjct: 381 VADIKSVVEGDRCPRCGAPLKIARGIEVGHIFKLGTKYSEALGATYTDEEGNEKPIVMGC 440 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R VAA+IE HD KGIIWP SVAP+ + ++ + D+ + EKIY +L + Sbjct: 441 YGIGINRTVAAIIEQHHDEKGIIWPMSVAPYHVIVVPVNVSDEEQKQIAEKIYNKLLEEK 500 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +V DD + G +F ADL+G P++V +G K V + VEIK Sbjct: 501 LEVLIDDRDVRAGVKFNDADLIGIPVRVTIGKK-VKEGIVEIK 542 >gi|326391122|ref|ZP_08212668.1| prolyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200] gi|325992821|gb|EGD51267.1| prolyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200] Length = 570 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 116/255 (45%), Positives = 161/255 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ +P L+E P +AEI SH LML+ ++ + + G+Y +LPLGQ+ L V I+REE Sbjct: 1 MRLSQLLVPTLREIPAEAEIPSHILMLKAALMRKLASGVYIYLPLGQRVLRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ + L A+L ESGR+D +G EM +L DRN++ GPTHEEV TD+ R+ Sbjct: 61 MDRAGSQEVLMSALIPAELLKESGRWDVFGPEMFKLKDRNERDFCLGPTHEEVFTDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP YQIQ KFRDE RPRFGVMRSREF+MKDAYSFD+ EG S+NKM+ + Sbjct: 121 EVKSYRQLPLILYQIQTKFRDERRPRFGVMRSREFIMKDAYSFDVDWEGLDKSFNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GLK + + A+SG +GG S EF+V++ GE + + + Sbjct: 181 YCRIFDRCGLKYLVVEADSGAMGGKDSKEFMVISGVGEAVIAYCDNCGYAANEEKAECLI 240 Query: 241 DIISLNSIVEQWTAP 255 + ++ + Sbjct: 241 NQEIDEEMLPKEKVY 255 Score = 173 bits (438), Expect = 6e-41, Method: Composition-based stats. Identities = 74/190 (38%), Positives = 101/190 (53%), Gaps = 3/190 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P RGIEVGHIF GTKYS + A + +G + + MG Sbjct: 381 VVADIKNVIEGDKCPRCGSLLKIDRGIEVGHIFKLGTKYSDALGAKYVDEEGNEKPIIMG 440 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R VAA+IE HD KGIIWP SVAP+ + ++ + ++ E IYA L K Sbjct: 441 CYGIGINRTVAAIIEQHHDEKGIIWPMSVAPYHVIIVPVNVSNEAQNRVAEDIYAALQKE 500 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD + G +F ADLLG P+++ VG K V D VEIK R E++ + +V+ Sbjct: 501 GIEVLIDDRDLRAGVKFNDADLLGIPIRITVGKK-VDDGIVEIKLREKEEAEEVKISDVV 559 Query: 436 NYASHRFSNN 445 + Sbjct: 560 EKVKNIIKEK 569 >gi|257459979|ref|ZP_05625083.1| threonyl-tRNA synthetase [Campylobacter gracilis RM3268] gi|257442420|gb|EEV17559.1| threonyl-tRNA synthetase [Campylobacter gracilis RM3268] Length = 607 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 75/444 (16%), Positives = 155/444 (34%), Gaps = 40/444 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K+ + + RD + M Q G+ WLP G + + + + Sbjct: 199 LKKHLTMLEEAKKRDHRKLGTE-MKFFTFDEQIGAGLPIWLPAGTRMRIKLEGRLYRQLR 257 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G + P + +D W SG Y +Y + M ++ P + +++S I Sbjct: 258 KRGYEPVRGPEILKSDAWKISGHYSNYKENM-YFTTIEEQEYGIKPMNCVGHIKVYQSEI 316 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP F + + R E G+ R REF DA+ F + P K + ++ Sbjct: 317 RSYRDLPLKFCEYGVVHRHEKSGVLHGLFRVREFTQDDAHLFVM-PSQIKENVYEILDFV 375 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + G E+ + T + + D + D+ Sbjct: 376 ELLMKAFG------------------FEYELEISTKPQKAVGDDEVWDIATKALKDALDE 417 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ K+ D+L + ++ F ++ Sbjct: 418 KGLKYGLDEGGGAFYGPKIDI---KITDALGRKWQCGTVQVD----FNLPARF----ELG 466 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + + + + +G+ ++ G+ W + P ++S++ I + Sbjct: 467 YIDENNEKKQPVMLHRAILGSFERFVGILLEHTAGELPFW---ICPTQVSIVPIG---EA 520 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ++I L D D E + + A+ PL +++G VS V ++ Sbjct: 521 HASYAKEILNLLRAADIDGEILDRNETLNKRIRTAEKQKVPLIIVLGDNEVSARSVALRD 580 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R + ++ L+E +N+ + + Sbjct: 581 RRAREQRNLGLDEFLNFVKAKLNE 604 >gi|239636259|ref|ZP_04677261.1| prolyl-tRNA synthetase [Staphylococcus warneri L37603] gi|239597614|gb|EEQ80109.1| prolyl-tRNA synthetase [Staphylococcus warneri L37603] Length = 567 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 127/371 (34%), Positives = 197/371 (53%), Gaps = 6/371 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P ++E P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N++ IIREE Sbjct: 1 MKQSKVFIPTMREVPAEAEALSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNISKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T + R Sbjct: 61 MEKVDAVEILMPALQQAELWEESGRWGAYGPELMRLKDRNGREFALGPTHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKRLPLTLFQIQSKFRDEQRPRFGLLRGREFIMKDAYSFHADEASLDETYQDMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+G+ + P+ A+SG IGG+ +HEF+ L++ GE + + D+ E + Sbjct: 181 YDRIFKRVGINARPVVADSGAIGGNHTHEFMALSEIGEDTIVY-SNESDYAANIEKAEVV 239 Query: 241 DIISLNSI----VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + + +++ P T++ E L L E + ++ I + Sbjct: 240 YTANPKNTEVAELKKVETPNIKTAEEVAEYLNRPLDEIVKTMIFKVDGEFIMVLVRGHHE 299 Query: 297 PMSATFKGADGKDHYVQMGS-YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 K G D + + + HD I+ D + + Sbjct: 300 LNDVKLKAYFGTDQIEMASQDEIVNIVGAHPGSLGPIHDKDIKIYADHFVQDLNNFVIGA 359 Query: 356 AHDQVCRDACE 366 D + + Sbjct: 360 NEDGYHFENAQ 370 Score = 157 bits (397), Expect = 4e-36, Method: Composition-based stats. Identities = 68/161 (42%), Positives = 96/161 (59%), Gaps = 2/161 (1%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E HD GIIW Sbjct: 404 GIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGVSRTLSAIVEQHHDDNGIIW 463 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P SV PF + LI I + R +++Y +L DV +DD E+ G +F ADL+G Sbjct: 464 PKSVTPFDLHLITINPKKEEQRKLGDQLYDQLM-NNYDVLYDDRQERAGVKFNDADLIGL 522 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 PL+V+VG + + VE+K R TG E++ ++++ NY Sbjct: 523 PLRVVVGKR-AEEGIVEVKQRSTGESEEIHIDDLENYIKDL 562 >gi|70725135|ref|YP_252049.1| threonyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435] gi|68445859|dbj|BAE03443.1| threonyl-tRNA synthetase 2 (Threonine--tRNA ligase) [Staphylococcus haemolyticus JCSC1435] Length = 638 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 78/442 (17%), Positives = 153/442 (34%), Gaps = 41/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 YF + + R+ +L L M + + G+ +L GQ + + +RE Q + Sbjct: 232 YFEFLREAEERNHRRLGKQLKLF--MFSEEAPGMPFYLSNGQFIRNQMENFLREVQLKHD 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW ESG +D Y + M ++ P + IF++ ++SY Sbjct: 290 YDEVRTPLMMNKRLWEESGHWDHYHENM-YFTKVDENDYALKPMNCPGHMLIFKNELRSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 ++LP + R E G++R R F DA+ F + + + + Sbjct: 349 KDLPLRIAEFGQVHRHEFSGALNGLLRVRTFCQDDAHIFIMKSQIKSEVQEILKLI---- 404 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 I E+ + T D + S DD+ Sbjct: 405 ---------------DYIYSVFGFEYSIELSTRPDDYLGELDLWNEAEQSLAHVLDDLGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 SI E A Y DVH + D+L + + + ++ F K+ T+ Sbjct: 450 DYSINEGDGAFYGPKIDVH---IKDALNRSHQCATVQLD----FQMPEKF----ELTYIN 498 Query: 305 ADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + G++ ++ + +P +AP +++LI + ++ Sbjct: 499 EQNEKERPVVLHRAVFGSLDRFFGILI---EHFKGAFPLWMAPVQVNLIGVSDNNDG--- 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + L V DD E++G + + L +++G V ++ Sbjct: 553 YVRTVAEALRDENIRVAIDDREEKLGKKIRESQLNKISYTLVLGDDEQQHHTVSVRKYAH 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 E M ++ I H + Sbjct: 613 DDNETMDIQAFIEKLKHEIESK 634 >gi|92117217|ref|YP_576946.1| threonyl-tRNA synthetase [Nitrobacter hamburgensis X14] gi|91800111|gb|ABE62486.1| Ser-tRNA(Thr) hydrolase [Nitrobacter hamburgensis X14] Length = 681 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 73/443 (16%), Positives = 133/443 (30%), Gaps = 38/443 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD ++ L + G+ W G + A +R Sbjct: 257 YLKQIEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHAKGWTLFQEIIAYMRRRL-AED 313 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-----KAMIYGPTHEEVMTDIFRS 120 E++ P + LW SG ++ Y + M D + P + IF+ Sbjct: 314 YDEVNAPQMLDKSLWETSGHWEWYRENMFAAQSAGDEAEDKRWFAIKPMNCPGHVLIFKH 373 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR LP + + R E G+MR R F DA+ F + + + Sbjct: 374 GLKSYRELPIRLAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEQQLADECLKINDL 433 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + ++ + P S A++ T V + T Sbjct: 434 ILSTYEDFGFEGELTVKLSTRPDKRVGSDAAWDHAESVMTAVL--EQIKARSGNRVKTSI 491 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + A Y + L D++ + ++ FG Sbjct: 492 N---------PGEGAFYGPKFEY---VLRDAIGREWQCGTTQVDFNLPERFG-------- 531 Query: 300 ATFKGAD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + K V + G++ A ++ G +W V ++ Sbjct: 532 AFYIDEHSNKVAPVMVHRAICGSLERFAGILIEHFAGHFPLWLAPVQAVVATIT------ 585 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D ++ A + G + D E+I + L P ++VG K V I Sbjct: 586 SDADDYAREVVAAARRAGLRIEIDLRNEKINYKVREHSLAKVPALLVVGKKEAESRSVSI 645 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + + + +E I Sbjct: 646 RRLGSDGQTVLPTDEAIAALVEE 668 >gi|255325212|ref|ZP_05366318.1| proline--tRNA ligase [Corynebacterium tuberculostearicum SK141] gi|255297777|gb|EET77088.1| proline--tRNA ligase [Corynebacterium tuberculostearicum SK141] Length = 589 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 114/387 (29%), Positives = 170/387 (43%), Gaps = 22/387 (5%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+E+P DAE+ SHKL++R G + + + G+Y+WLPLG + L + ++R+E Sbjct: 4 RLSELFLRTLREDPADAEVPSHKLLVRAGYVRRVAPGVYTWLPLGLRTLRKIEDVVRQEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G EM P L + + ++ R+ YG + RL DR + M+ GPTHEE+ + Sbjct: 64 DAIGGQEMLFPALLPREPYEKTNRWVEYGDNLFRLKDRKNADMLLGPTHEEMFASAVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR GV+R REF MKD+YSFD+T EG SY + +Y Sbjct: 124 YSSYKDFPVTLYQIQTKYRDEERPRAGVLRGREFTMKDSYSFDMTDEGLDESYGRHRKAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 IF+RL + +A SG +GG S EF+ +++ GE F D+ E Sbjct: 184 QNIFNRLEIDYAICKATSGAMGGSASEEFLAVSEVGE-DTFVRSTEGDYAANVEAVVTPA 242 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + P A D + + L E + + ++ AT Sbjct: 243 PAEKDI----EGQPEAQEHDTPGAETIEKLVEWAQGAGITVDG-------------REAT 285 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVA-AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 R A + D + A + + Sbjct: 286 AADTLKCMMVKLYHPAVESEERESELAAVLIPGDRELDEKRLEAALEPVEFELAGDKEFA 345 Query: 361 CRDACEKIY---ARLSKVGCDVFWDDM 384 D K Y L+ G V D Sbjct: 346 DNDFLVKGYVGPRALNANGIKVLADPR 372 Score = 137 bits (344), Expect = 5e-30, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 6/188 (3%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 + K D PEN RGIE+GHIF G KY+ +GK MG Sbjct: 403 EFIEAAEVKEGDLAPENHGTLTLERGIELGHIFQLGRKYTEAFDVQILDENGKRAVPTMG 462 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R++A + E HD KG+ WP +VAP+++ + D +A +K+ LS Sbjct: 463 SYGIGITRMLAVLAEQRHDDKGLNWPVAVAPYQVHVAVAN-KDAAAMEAGDKLVEELSAK 521 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD G +F A+LLG P I+G + + K+E++ R G ++ E++ Sbjct: 522 GLEVLFDDRPKVSPGVKFKDAELLGMPFVAILG-RAFKEGKIELRIRG-GETLEVPAEDI 579 Query: 435 INYASHRF 442 ++ Sbjct: 580 VDKILELV 587 >gi|329939431|ref|ZP_08288767.1| threonyl-tRNA synthetase [Streptomyces griseoaurantiacus M045] gi|329301660|gb|EGG45554.1| threonyl-tRNA synthetase [Streptomyces griseoaurantiacus M045] Length = 666 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 72/429 (16%), Positives = 138/429 (32%), Gaps = 35/429 (8%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E R D +L L + + G+ + P G + R + Sbjct: 249 KAYLKLLEEASRRDHRKLGAELDLFS-FPDEIGSGLAVFHPKGGIVRREMENYSRVKHEE 307 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G ++ P + L+ SG Y M + P + IF+S + Sbjct: 308 AGYSFVNSPHITKGKLFETSGHLPYYADTMFPPIEMEGADYYLKPMNCPFHNLIFKSRGR 367 Query: 124 SYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ +R E G+ R R M D++ + + + + L Sbjct: 368 SYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDSHIYCTREQMAGEL-TSLLRFVL 426 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + GL + + D S +FI + + + + + Sbjct: 427 ALLRDYGLDDFYLELST----RDDSPKFIGSDED-----------WEEATEALRSAAAES 471 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + + D++ ++S ++ FG +YS Sbjct: 472 GLELVPDPGGAAFYGPKI---SVQAKDAIGRTWQMSTIQVDFNQPKRFGLEYS------- 521 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G++ V + G++ V+ + G W V I + + Sbjct: 522 AANGGREQPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPI------REDHA 575 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D + A+L + G D +++ + A P I G V+ V ++R Sbjct: 576 DYLAEFVAKLREHGIRAEVDHSDDRMQKKIRTAQQQKIPFMAIAGDDDVNGGTVSFRYRD 635 Query: 423 TGIREDMSL 431 R + L Sbjct: 636 GSQRNGVPL 644 >gi|299139552|ref|ZP_07032726.1| prolyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8] gi|298598480|gb|EFI54644.1| prolyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8] Length = 614 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 110/221 (49%), Positives = 147/221 (66%), Gaps = 1/221 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R SK F+P L+E P DAE+ASHKL+LR G I Q GIYS+LPLGQ++L+ + AI+REE Sbjct: 3 RWSKLFIPTLREAPTDAEVASHKLLLRAGYIRQLGAGIYSYLPLGQRSLNKIIAIVREEM 62 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N+ G E +P L +LW ESGR+ G+ + L DR + THEEVMT I R+ Sbjct: 63 NKIG-QEFLLPALNPRELWEESGRWTGMGQNLFHLQDRKGAELCLAMTHEEVMTSIARNE 121 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 ++SY+ LP +YQIQ KFRDE RP+ G++R R+F MKDAYSFD+ G SY K + +Y Sbjct: 122 LRSYKQLPQIWYQIQTKFRDEPRPKAGLLRVRQFTMKDAYSFDVDQAGLDESYRKHYDTY 181 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 +RIF R GL+ + + A+SG +GG S EF+V D GE + Sbjct: 182 VRIFKRCGLEFVAVDADSGAMGGSGSQEFMVYTDAGEDLIA 222 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 60/199 (30%), Positives = 92/199 (46%), Gaps = 4/199 (2%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 +T+ A NE D + + +E+GHIF GTKYS M A A+GK+ Sbjct: 416 DFTSTVVADIRNINEGEPDPIGGEPLRLGKAVEIGHIFKLGTKYSESMGARVLDANGKEV 475 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI---KAHDQVCRDACEK 367 MG YGIG R++ A IESS A + + + A EK Sbjct: 476 LPIMGCYGIGIERILTAAIESSAAANAGEQYALPAAIAPFAVVVTITNVREADLLAAGEK 535 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 I A L G DV DD E+ G +F A+L+G P ++ +G K +++ +VE+ RLT Sbjct: 536 IAADLEAAGVDVLLDDRDERAGVKFKDAELIGVPYRINIGKK-LAEGQVELVDRLTQTTT 594 Query: 428 DMSLEEVINYASHRFSNNR 446 D+ L+ + + + ++ Sbjct: 595 DLPLDAITAHIQSLLAASK 613 >gi|254527233|ref|ZP_05139285.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202] gi|221538657|gb|EEE41110.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202] Length = 638 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 135/445 (30%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 + Y I + RD K L I + S G+ W P G + IRE Sbjct: 228 LNNYLKRIEEAEKRDHRKLGKKHSLF--HIQEESPGMIFWHPNGWTIYQVLEKYIREILK 285 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + +E+ P LW +SG ++ + +M ++ P + +F + Sbjct: 286 KNDYLEIKTPQAVDKSLWEKSGHWEKFRDDMFT-TASENRTYAIKPMNCPCHIQVFNQGL 344 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSY++LP + R+E G+MR R F DA+ F T E + + Sbjct: 345 KSYKDLPIRLAEFGSCHRNEPSGALHGLMRVRNFTQDDAHIFC-TEEQIQEEVSTFIDLV 403 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G I ++ + P S E D + D+ Sbjct: 404 FEVYKTFGFDEIIIKLSTRPEKKVGSEE-----------------IWDKSEEALTKALDN 446 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y + L D L + ++ AT Sbjct: 447 KNLKWELQPGEGAFYGPKIEF---SLKDCLNRVWQCGTIQVDFSMPVRLD--------AT 495 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + + +G+ ++ ++ K IW +S+ Sbjct: 496 YVDIDNEKRNPVMLHRAILGSFERFIGILIEQYEAKFPIWLAPYQITLLSIT------DR 549 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + C K L G D E+IG + A L PL ++G K V ++ Sbjct: 550 NIEKCLKFNELLINNGYRSTVDIRNEKIGYKIREATLGRVPLIAVIGDKEEEIDSVSLRA 609 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 +L + Sbjct: 610 LDGRDLGIFNLTNLCKLMDGLIEKR 634 >gi|168027962|ref|XP_001766498.1| predicted protein [Physcomitrella patens subsp. patens] gi|162682407|gb|EDQ68826.1| predicted protein [Physcomitrella patens subsp. patens] Length = 615 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 74/444 (16%), Positives = 151/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQN 62 K + +E R D L L + I + G+ W P G + ++ Sbjct: 206 KAYQVQKEEAKRRDHRRLGQDLNLFS--IQEDAGGGLVFWHPKGAMIRHIIEDYWKKMHF 263 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P + DLW SG YD Y + M ++ P + +++ + Sbjct: 264 ANGYELLYTPHIAKLDLWKTSGHYDFYKENMFDQMQIEEELYQIRPMNCPFHIQVYKDAL 323 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR LP ++ +R E G+ R R F D + F L + + Sbjct: 324 RSYRELPMRVAELGTVYRYERSGTLHGLFRVRGFTQDDGHIFCLPDQIRDE-IRGVLDLT 382 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I + G + + P + S + + + + +D Sbjct: 383 EMILKQFGFSKFEINLSTRP-----------------EKAVGSDEIWEKATTALKSALED 425 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y DV K+ D++ + S ++ F ++++ Sbjct: 426 KGWEYGIDEGGGAFYGPKIDV---KIEDAIGRKWQCSTIQVD----FNLPERFNMVY--- 475 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + + + G++ ++ + +P +AP + L+ + ++ Sbjct: 476 VDSDTSRKQPIMIHRAIFGSIERFFGILT---ENYAGDFPLWLAPVQARLLPVTDNE--- 529 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D C+K+ A L GE++G A+ P+ +VG K V + ++ R Sbjct: 530 VDYCKKVVAELKAREIRAEV-IFGERLGKLIRNAETQKIPVMAVVGRKEVETETLTVRTR 588 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 G ++++ ++ + S Sbjct: 589 HGGELGNVTVADLADRIQLAISTR 612 >gi|295693387|ref|YP_003601997.1| threonyl-tRNA synthetase [Lactobacillus crispatus ST1] gi|295031493|emb|CBL50972.1| Threonyl-tRNA synthetase [Lactobacillus crispatus ST1] Length = 645 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 78/433 (18%), Positives = 152/433 (35%), Gaps = 34/433 (7%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L L + + G+ W+P G V I + + G + P L Sbjct: 239 RDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVL 296 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y +M D D M P + I++ HI+SYR+LP Sbjct: 297 MNLDAYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVA 356 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + K+ + ++ + Sbjct: 357 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQTE-FAKILKLIMDVYKDFDITD 415 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + F + + + DD+ E Sbjct: 416 YYFRLS-------------YRDPKNTDKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGE 462 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ T+ G DG++H Sbjct: 463 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----GLTYVGQDGEEHRP 511 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 M G + + I + +P +AP ++ +I + + EK+ L Sbjct: 512 VMIHR--GIVGTMERFIAYLTEIYKGAFPTWLAPVQVEIIPVNL--DAHGEYAEKVRQEL 567 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 +K G D E++G + + P +++G + + V ++ T MSL+ Sbjct: 568 AKRGFRAEVDTRNEKMGYKIRESQTQKVPYTLVLGDDEMKANGVNVRPYGTDQENSMSLD 627 Query: 433 EVINYASHRFSNN 445 + I + Sbjct: 628 DFIKEIDADVKSY 640 >gi|257878529|ref|ZP_05658182.1| prolyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257882947|ref|ZP_05662600.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257894712|ref|ZP_05674365.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|293567720|ref|ZP_06679062.1| prolyl-tRNA synthetase [Enterococcus faecium E1071] gi|294618726|ref|ZP_06698258.1| prolyl-tRNA synthetase [Enterococcus faecium E1679] gi|294620760|ref|ZP_06699967.1| prolyl-tRNA synthetase [Enterococcus faecium U0317] gi|257812757|gb|EEV41515.1| prolyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257818605|gb|EEV45933.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257831091|gb|EEV57698.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|291589563|gb|EFF21369.1| prolyl-tRNA synthetase [Enterococcus faecium E1071] gi|291595039|gb|EFF26384.1| prolyl-tRNA synthetase [Enterococcus faecium E1679] gi|291599740|gb|EFF30750.1| prolyl-tRNA synthetase [Enterococcus faecium U0317] Length = 569 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 114/273 (41%), Positives = 160/273 (58%), Gaps = 3/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK +P L+E P DAE+ SH+++LR G I Q S GIYS+LPL + L+ + I+REE Sbjct: 1 MRQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVSAGIYSYLPLANRVLEKLKRIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM +P + A+LW ESGRY++YG + R DRND+ MI GPTHEE TD+ R+ Sbjct: 61 FEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRNDRKMILGPTHEETFTDLMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPRFG++R REF+MKDAYSF T E +Y + Sbjct: 121 EINSYKKLPLNLYQIQPKYRDEKRPRFGLLRGREFIMKDAYSFHATEESLDETYKDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--D 238 Y +F R GL+ + + G +GG S EF+ +++ GE + C D+ E Sbjct: 181 YTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAISEIGEDTI-CYSTESDYAANLEMATSY 239 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + S + +E + F S+ Sbjct: 240 YVSKKSHETQLELEKVATPNVKSIDEVADFFSV 272 Score = 149 bits (376), Expect = 8e-34, Method: Composition-based stats. Identities = 70/231 (30%), Positives = 117/231 (50%), Gaps = 6/231 (2%) Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP-YAATSDVHNEKLFDSLPEN 274 + + +V+ + D T ++ V + D+ + D P+N Sbjct: 339 SDDVKVYADRYVQDLANAI--TGANETGFHYKNVNPERDFTVLSYEDLRFVQEGDPSPDN 396 Query: 275 KRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 V RGIE+GHIF GT+YS M AT +G++ +V MG YGIG R+++A++E Sbjct: 397 NGVLAFTRGIEIGHIFKIGTRYSESMGATVLDENGREKFVIMGCYGIGVSRLLSAIVEQH 456 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 D +GI WP +APF + ++ + D+ ++ ++K G +V DD E+ G +F Sbjct: 457 SDEQGINWPKGIAPFDLHIVQMNLKDEYQTSLTNELEEAMTKAGYEVLVDDRNERAGVKF 516 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 A +DL+G P+++ VG K V D VE+K + TG ++ EE+ N + Sbjct: 517 ADSDLIGCPIRITVGKKAV-DGIVEVKIKKTGEMVEVRKEELANTLPILLN 566 >gi|50952758|gb|AAT90291.1| putative threonyl-tRNA synthetase [uncultured proteobacterium eBACred25D05] Length = 650 Score = 226 bits (577), Expect = 5e-57, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 149/442 (33%), Gaps = 45/442 (10%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD ++ L + + + G W P G K + +R +Q G Sbjct: 237 LNMLEEAAKRDHRKLGKEMDLF--HMQEEAPGQIFWHPNGWKIYTLLQDYMRRQQEVGGY 294 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIY-----GPTHEEVMTDIFRSH 121 +E++ P + LW ESG +D Y + M + + A P + ++ Sbjct: 295 VEVNTPQVVDRKLWEESGHWDKYQEHMFIVEVDEEHAREKSINALKPMNCPCHVQVYNQG 354 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR+LP + R E G+MR R F DA+ F + + K Sbjct: 355 IKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFCQEDQIESET-KKFINF 413 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++ LG ++ P S D D + + Sbjct: 414 LSGVYKDLGFPKFAVKFSDRPKNR-----------------AGSDDVWDKAEGALKSATT 456 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + A Y + L D++ + + ++ F + + A Sbjct: 457 SAGFDFELNPGEGAFYGPKLEF---VLTDAIGRDWQCGTLQVD----FVLPDR----LDA 505 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 F G DG+ H + +G+ ++ + G+ W S++ Sbjct: 506 NFIGEDGQKHRPVMLHRAVLGSFERFIGILIENFAGRLPFWLAPRQVVVASIVT------ 559 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + C +I L VG D E+I + + P + +G++ V D + ++ Sbjct: 560 DANEYCTEIVDALKLVGIRAESDLRNEKISYKVREHSVAKVPTILAIGNREVEDRAITVR 619 Query: 420 HRLTGIREDMSLEEVINYASHR 441 + ++ ++VI Sbjct: 620 TLGEKQTKTINFDQVILELQKE 641 >gi|184201017|ref|YP_001855224.1| threonyl-tRNA synthetase [Kocuria rhizophila DC2201] gi|183581247|dbj|BAG29718.1| threonyl-tRNA synthetase [Kocuria rhizophila DC2201] Length = 718 Score = 226 bits (577), Expect = 5e-57, Method: Composition-based stats. Identities = 66/448 (14%), Positives = 134/448 (29%), Gaps = 48/448 (10%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + G+ + P G + RE R G + Sbjct: 260 EAERRDHRKLGVELDLFS-FPDELGSGLPVFHPKGGIIRKEMEDYSRERHARAGYEFVYT 318 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD-------------RNDKAMIYGPTHEEVMTDIF 118 P + L+ SG D Y M + + P + + I+ Sbjct: 319 PHITKGHLYEVSGHLDWYRDGMFPPMHVDEERDPDTGELTKPGQDYYLKPMNCPMHNLIY 378 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 RS +SYR LP ++ +R E G+ R R DA+ + + Sbjct: 379 RSRGRSYRELPLRLFEFGAVYRYEKSGVIHGLTRVRGMTQDDAHIYCTREQMKGEL-TNT 437 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L + G++ + + + S + D + Sbjct: 438 LNFVLSLLKDYGMEDFYLELST----------------KDPNKFVGSDEIWDEATRTLRE 481 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 +D A Y + + D++ ++S ++ F ++ L Sbjct: 482 VAEDSGLELVPDPAGAAFYGPKI---SVQARDAIGRTWQMSTIQLD----FNLPERFDLE 534 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 A+ + V + G++ V+ + +P ++P ++ I + Sbjct: 535 YQAS---DGSRRRPVMIHRALFGSVERFMGVLT---EHYAGAFPAWLSPVQVRAIPVA-- 586 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + D ++ L + G V D ++ + A P VI G + V Sbjct: 587 -EAFNDYLDEFAQTLRERGIRVEVDTSSDRFPKKIRTASKDKIPFVVIAGGEDAEAGTVS 645 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 + R +S E + + + Sbjct: 646 FRFRDGSQHNGVSQAEAVELIARHVAER 673 >gi|33861154|ref|NP_892715.1| threonyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|73919818|sp|Q7V287|SYT_PROMP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|33639886|emb|CAE19056.1| Threonyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 638 Score = 226 bits (577), Expect = 5e-57, Method: Composition-based stats. Identities = 72/442 (16%), Positives = 139/442 (31%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD K L I + S G+ W P G + +RE N+ Sbjct: 231 YLKRIEEAEKRDHRKLGKKHSLF--HIQEESPGMIFWHPNGWTIYQVLEKYVREILNKND 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P LW +SG +D + ++M ++ P + +F +KSY Sbjct: 289 YLEIKTPQAVDKSLWEKSGHWDKFREDMFT-TASENRTYAIKPMNCPCHIQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 ++LP + R+E G+MR R F DA+ F + + + Sbjct: 348 KDLPIRLAEFGSCHRNEPSGALHGLMRVRNFTQDDAHIFCTEEQIQAE-VSTFIDLVFEV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ + P S++ D + D+ Sbjct: 407 YKTFGFDEIIIKLSTRPEKR-----------------VGSENIWDKSEEALMKALDNKSL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ AT+ Sbjct: 450 KWVLQPGEGAFYGPKIEF---SLKDCLDRVWQCGTIQVDFSMPIRLD--------ATYID 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + +G+ ++ ++ K IW +S+ + Sbjct: 499 LNNEKRNPVMLHRAILGSFERFIGILIEQYEAKFPIWLAPYQIILLSIT------DRNIE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C K ++ G D E+IG + A + PL ++G K V ++ Sbjct: 553 KCLKFNQLINSKGYRSKVDIRNEKIGYKIREATIGRIPLIAVIGDKEEQFDSVALRALDG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 L+++ ++ Sbjct: 613 KNLGIFKLDDLYKLMNNLIEKK 634 >gi|329925255|ref|ZP_08280198.1| proline--tRNA ligase [Paenibacillus sp. HGF5] gi|328940088|gb|EGG36421.1| proline--tRNA ligase [Paenibacillus sp. HGF5] Length = 575 Score = 226 bits (577), Expect = 5e-57, Method: Composition-based stats. Identities = 117/232 (50%), Positives = 151/232 (65%), Gaps = 1/232 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ + +++ P +AE SH+ MLR G I Q + GIYS+LPLG + L + AIIR+E Sbjct: 1 MRQSQLLMTTMRDVPSEAEALSHQWMLRGGYIRQTAAGIYSYLPLGWRVLRKIEAIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P +Q A+LW ESGRYD YG E++RL DR+D+ + GPTHEEV+T I R Sbjct: 61 MDSAGGQELLMPAVQPAELWKESGRYDVYGAELIRLHDRHDREFVLGPTHEEVITSIVRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP YQIQ K+RDE RPRFG++R REFLMKDAYSFD G SY M+ + Sbjct: 121 EISSYRKLPVNLYQIQSKYRDERRPRFGLLRGREFLMKDAYSFDRDWGGLDASYRNMYET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDL-SHEFIVLADTGETQVFCSKDFMDFP 231 Y RIF R GL + A++G IGG +HEF+ LAD GE V D Sbjct: 181 YERIFRRCGLMFRAVEADAGAIGGQGETHEFMALADIGEDTVVSCSDCRYAA 232 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 67/183 (36%), Positives = 95/183 (51%), Gaps = 4/183 (2%) Query: 261 DVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D N + P RGIE+GH+F GTKYS M+ + ADG++ + MG YG Sbjct: 389 DFRNVAEGEPCPRCGAPLQFHRGIELGHVFKLGTKYSDAMNGKYLDADGREKPLIMGCYG 448 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG RV+AA+ E ++WP SVAPFK+ +I + D+ E IY LS G + Sbjct: 449 IGVSRVMAAIAEQRISDGRLVWPMSVAPFKVHIIPVAVKDETQMQLAEHIYRELSGAGLE 508 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 DD E+ G +F ADL G PL++IVG + + +VE GI+ + +EE I + Sbjct: 509 PLLDDRDERAGVKFKDADLAGAPLRIIVG-RGAASGEVEWMG-EDGIKISLPVEEAIQRS 566 Query: 439 SHR 441 Sbjct: 567 REE 569 >gi|300780959|ref|ZP_07090813.1| proline--tRNA ligase [Corynebacterium genitalium ATCC 33030] gi|300532666|gb|EFK53727.1| proline--tRNA ligase [Corynebacterium genitalium ATCC 33030] Length = 611 Score = 226 bits (577), Expect = 5e-57, Method: Composition-based stats. Identities = 127/386 (32%), Positives = 177/386 (45%), Gaps = 17/386 (4%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G I + + G+YSWLPLG KA+ N+ I+REE Sbjct: 17 RLSTLFLRTLREDPADAEVPSHKLLVRAGYIRRAAPGVYSWLPLGLKAVRNIEEIVREEM 76 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+ P L + + + R+ YG ++ RL DR M+ GPTHEE+ T + Sbjct: 77 NAIGAQELLFPALLPREPYEATNRWTEYGDDLFRLQDRKGTDMLLGPTHEEMFTLAVKDL 136 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSFD+T EG SY +Y Sbjct: 137 YSSYKDFPVTLYQIQTKYRDEARPRAGILRGREFVMKDSYSFDMTDEGLSESYAAHRRAY 196 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 IF R+GLK +A SG +GG S EF+ +D GE F DF E Sbjct: 197 QAIFDRVGLKYEICQATSGAMGGSASEEFLAYSDNGE-DTFVVSTAGDFAANVEAVQT-- 253 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY---FGTKYSLPM 298 I + VE P A + + +SL + + +E + Sbjct: 254 IAPADRPVEGL--PEAVVHETPASETIESLVDWANSAGVNVEDREVTAADTLKCMVVKID 311 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 DG Q+ + R + + S F S +K + Sbjct: 312 DPRVVSEDGTPVGPQLTGILMPGDRALDEKRLEASLEPAAFELASDEDFAKSSFLVKGYV 371 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDM 384 L+ G V D Sbjct: 372 GP---------RGLNANGVRVLADPR 388 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 92/193 (47%), Gaps = 8/193 (4%) Query: 260 SDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 + K D P ARGIE+GHIF G KY+ M +GK MGSY Sbjct: 421 IEAAEIKEGDPSPTGNGTLRLARGIELGHIFQLGRKYTEAMDVQILDENGKRAVPTMGSY 480 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R++A + E HD KG++WP +AP+++ L D +A E++ G Sbjct: 481 GIGVTRMLAVIAEQLHDDKGLVWPVEIAPYQVHLAVAN-KDAAAMEASERLVGEFEAAGI 539 Query: 378 DVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL---TGIREDMSLEE 433 DV DD G +F A+LLG P VI+G + +D +E++ R G ++ +E Sbjct: 540 DVLVDDRPKVSPGVKFKDAELLGMPFIVILG-RSFADGIIELRIRGGENGGEILEVPADE 598 Query: 434 VINYASHRFSNNR 446 +++ + R Sbjct: 599 IVSRVQELIAAAR 611 >gi|295839903|ref|ZP_06826836.1| threonine-tRNA ligase [Streptomyces sp. SPB74] gi|197696732|gb|EDY43665.1| threonine-tRNA ligase [Streptomyces sp. SPB74] Length = 658 Score = 226 bits (577), Expect = 5e-57, Method: Composition-based stats. Identities = 68/439 (15%), Positives = 133/439 (30%), Gaps = 36/439 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD ++L L + + G+ + P G + R G + Sbjct: 254 EAEKRDHRKLGNELDLFS-FPEEVGPGLAVFHPKGGIIRRAMEDYSRRRHEEEGYEFVYS 312 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P L+ +SG D Y M P + + IF + +SYR LP Sbjct: 313 PHTTKGALFQKSGHLDWYADGMYPPMQLDEGVDYYLKPMNCPMHNLIFDARGRSYRELPL 372 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 ++ +R E G+ RSR F DA+ + + ++ +K L + G Sbjct: 373 RLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQMAEEL-DKTLTFVLNLLRDYG 431 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 L + + E + S + + + + Sbjct: 432 LDDFYLELST----------------KDEKKFVGSDEVWEEATSTLAEVAEKQGLPLVPD 475 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y + + D++ ++S ++ F ++ L +A + Sbjct: 476 PGGAAFYGPKI---SVQARDAIGRTWQMSTIQLD----FNLPERFDLSYTAA---DGSRQ 525 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + G++ AV+ + P +AP + I + ++ Sbjct: 526 RPVMIHRALFGSIERFFAVLL---EHYAGAMPPWLAPVQAVGIPVG---DAHVPYLKEFA 579 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 A K G V D +++ + P +IVG ++ V +HR + Sbjct: 580 AEARKQGLRVDVDASSDRMQKKIRNHQKQKTPFMIIVGDDDMNAGTVSFRHRDGSQENGI 639 Query: 430 SLEEVINYASHRFSNNRPV 448 E + V Sbjct: 640 PKGEALAKLRDVVERRVQV 658 >gi|257884339|ref|ZP_05663992.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,501] gi|261207398|ref|ZP_05922084.1| prolyl-tRNA synthetase [Enterococcus faecium TC 6] gi|289566680|ref|ZP_06447097.1| prolyl-tRNA synthetase [Enterococcus faecium D344SRF] gi|294613940|ref|ZP_06693875.1| prolyl-tRNA synthetase [Enterococcus faecium E1636] gi|257820177|gb|EEV47325.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,501] gi|260078289|gb|EEW65994.1| prolyl-tRNA synthetase [Enterococcus faecium TC 6] gi|289161539|gb|EFD09422.1| prolyl-tRNA synthetase [Enterococcus faecium D344SRF] gi|291593215|gb|EFF24789.1| prolyl-tRNA synthetase [Enterococcus faecium E1636] Length = 569 Score = 226 bits (577), Expect = 5e-57, Method: Composition-based stats. Identities = 114/273 (41%), Positives = 160/273 (58%), Gaps = 3/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK +P L+E P DAE+ SH+++LR G I Q S GIYS+LPL + L+ + I+REE Sbjct: 1 MRQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVSAGIYSYLPLANRVLEKLKRIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM +P + A+LW ESGRY++YG + R DRND+ MI GPTHEE TD+ R+ Sbjct: 61 FEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRNDRKMILGPTHEETFTDLMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPRFG++R REF+MKDAYSF T E +Y + Sbjct: 121 EINSYKKLPLNLYQIQPKYRDEKRPRFGLLRGREFIMKDAYSFHATEESLDETYKDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--D 238 Y +F R GL+ + + G +GG S EF+ +++ GE + C D+ E Sbjct: 181 YTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAISEIGEDTI-CYSTESDYAANLEMATSY 239 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + S + +E + F S+ Sbjct: 240 YVSKKSHETQLELEKVATPNVKSIDEVADFFSV 272 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 70/231 (30%), Positives = 118/231 (51%), Gaps = 6/231 (2%) Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP-YAATSDVHNEKLFDSLPEN 274 + + +V+ + D T ++ V + D+ + D P+N Sbjct: 339 SDDVKVYADRYVQDLANAI--TGANETGFHYKNVNPERDFTVLSYEDLRFVQEGDPSPDN 396 Query: 275 KRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 V RGIE+GHIF GT+YS M AT +G++ +V MG YGIG R+++A++E Sbjct: 397 NGVLAFTRGIEIGHIFKIGTRYSESMGATVLDENGREKFVIMGCYGIGVSRLLSAIVEQH 456 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 D +GI WP +APF + ++ + D+ + ++ ++K G +V DD E+ G +F Sbjct: 457 SDEQGINWPKGIAPFDLHIVQMNLKDEYQTNLTNELEEAMTKAGYEVLVDDRNERAGVKF 516 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 A +DL+G P+++ VG K V D VE+K + TG ++ EE+ N + Sbjct: 517 ADSDLIGCPIRITVGKKAV-DGIVEVKIKKTGEMVEVRKEELANTLPILLN 566 >gi|254453851|ref|ZP_05067288.1| threonyl-tRNA synthetase [Octadecabacter antarcticus 238] gi|198268257|gb|EDY92527.1| threonyl-tRNA synthetase [Octadecabacter antarcticus 238] Length = 649 Score = 226 bits (577), Expect = 5e-57, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 149/443 (33%), Gaps = 45/443 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + + +L+E RD ++ L + + + G W P G + +R +Q Sbjct: 235 RAHMNMLEEAAKRDHRKLGREMDLF--HMQEEAPGQIFWHPNGWLIYTQLQDYMRRKQRA 292 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIY-----GPTHEEVMTDIF 118 G +E++ P + LW +SG ++ Y + M + D A P + I+ Sbjct: 293 GGYVEVNTPQVVDRKLWEQSGHWEKYQEHMFVVEVDEDHAREKSVNALKPMNCPCHVLIY 352 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F DA+ F T + + Sbjct: 353 NQGLKSYRDLPMRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFC-TEDQIEEETLTY 411 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 ++ LG ++ ++ P S E A+T + Sbjct: 412 IEFLTGVYKDLGFENFKVKFSDRPDTRAGSDEVWDKAET-----------------ALLA 454 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + A Y + L D++ + + ++ F + Sbjct: 455 ATRKAGIEPELNPGEGAFYGPKLEF---VLTDAIGRDWQCGTHQVD----FVLPDR---- 503 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + A + GADG+ H + +G+ ++ H GK W S+I Sbjct: 504 LDANYIGADGEKHRPVMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASII---- 559 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++ A L G D E+I + L P+ + G++ V + V Sbjct: 560 --SDADDYVREVVAALQAKGVRAEADIRNEKINYKVREHSLGKVPVILACGAREVEERTV 617 Query: 417 EIKHRLTGIREDMSLEEVINYAS 439 ++ +L ++ Sbjct: 618 SVRRLGDKQTSVTTLAVIVEDLQ 640 >gi|69246859|ref|ZP_00604151.1| Prolyl-tRNA synthetase, bacterial [Enterococcus faecium DO] gi|257889274|ref|ZP_05668927.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|258615945|ref|ZP_05713715.1| prolyl-tRNA synthetase [Enterococcus faecium DO] gi|260560114|ref|ZP_05832292.1| prolyl-tRNA synthetase [Enterococcus faecium C68] gi|293560203|ref|ZP_06676705.1| prolyl-tRNA synthetase [Enterococcus faecium E1162] gi|314937502|ref|ZP_07844835.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133a04] gi|314942161|ref|ZP_07849015.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133C] gi|314947499|ref|ZP_07850914.1| prolyl-tRNA synthetase [Enterococcus faecium TX0082] gi|314951486|ref|ZP_07854535.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133A] gi|314992576|ref|ZP_07857994.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133B] gi|314995489|ref|ZP_07860589.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133a01] gi|68195040|gb|EAN09503.1| Prolyl-tRNA synthetase, bacterial [Enterococcus faecium DO] gi|257825634|gb|EEV52260.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|260073949|gb|EEW62273.1| prolyl-tRNA synthetase [Enterococcus faecium C68] gi|291605875|gb|EFF35307.1| prolyl-tRNA synthetase [Enterococcus faecium E1162] gi|313590323|gb|EFR69168.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133a01] gi|313592868|gb|EFR71713.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133B] gi|313596326|gb|EFR75171.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133A] gi|313599084|gb|EFR77929.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133C] gi|313643143|gb|EFS07723.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133a04] gi|313646049|gb|EFS10629.1| prolyl-tRNA synthetase [Enterococcus faecium TX0082] Length = 569 Score = 226 bits (577), Expect = 5e-57, Method: Composition-based stats. Identities = 114/273 (41%), Positives = 160/273 (58%), Gaps = 3/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK +P L+E P DAE+ SH+++LR G I Q S GIYS+LPL + L+ + I+REE Sbjct: 1 MRQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVSAGIYSYLPLANRVLEKLKRIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM +P + A+LW ESGRY++YG + R DRND+ MI GPTHEE TD+ R+ Sbjct: 61 FEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRNDRKMILGPTHEETFTDLMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPRFG++R REF+MKDAYSF T E +Y + Sbjct: 121 EINSYKKLPLNLYQIQPKYRDEKRPRFGLLRGREFIMKDAYSFHATEESLDETYKDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--D 238 Y +F R GL+ + + G +GG S EF+ +++ GE + C D+ E Sbjct: 181 YTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAISEIGEDTI-CYSTESDYAANLEMATSY 239 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + S + +E + F S+ Sbjct: 240 YVSKKSHETQLELEKVATPNVKSIDEVADFFSV 272 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 70/231 (30%), Positives = 119/231 (51%), Gaps = 6/231 (2%) Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP-YAATSDVHNEKLFDSLPEN 274 + + +V+ + D T ++ V + D+ + D P+N Sbjct: 339 SDDVKVYADRYVQDLANAI--TGANETGFHYKNVNPERDFTVLSYEDLRFVQEGDPSPDN 396 Query: 275 KRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 V RGIE+GHIF GT+YS M AT +G++ +V MG YGIG R+++A++E Sbjct: 397 NGVLAFTRGIEIGHIFKIGTRYSESMGATVLDENGREKFVIMGCYGIGVSRLLSAIVEQH 456 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 D +GI WP +APF + ++ + D+ + ++ ++K G +V DD E+ G +F Sbjct: 457 SDEQGINWPKGIAPFDLHIVQMNLKDEYQTNLTNELEEAMTKAGYEVLVDDRNERAGVKF 516 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 A +DL+G P+++ VG K V D VE+K + TG ++ EE++N + Sbjct: 517 ADSDLIGCPIRITVGKKAV-DGIVEVKIKKTGEMVEVRKEELVNTLPILLN 566 >gi|313901629|ref|ZP_07835066.1| prolyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965] gi|313468110|gb|EFR63587.1| prolyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965] Length = 586 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 119/237 (50%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++ +P L+++P +AEIASH+LMLR G+I + + GIY WLPLG++A+ V I+REE Sbjct: 1 MRWTRLLIPTLRDDPAEAEIASHRLMLRAGLIRRVTAGIYEWLPLGRRAVVKVETIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR G +E+ +P +Q A+LW E+GR+ YG+EM RL DR+ + GPTHEE++TD+ R+ Sbjct: 61 MNRKGGLEVGLPIVQPAELWRETGRWAQYGEEMWRLKDRHGREYCLGPTHEEIITDLVRA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP YQIQ K+RDE+RPRFGVMR+REF+MKDAYSFD+ EG + SY M + Sbjct: 121 TVSSYRQLPLLLYQIQNKYRDEIRPRFGVMRAREFIMKDAYSFDVDAEGLERSYQAMDDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R GL P+ A+ G IGG +HEF+ LAD GE + + E Sbjct: 181 YRRIFSRCGLVFRPVAADPGAIGGSGTHEFMALADYGEALIVYCDAC-GYAANVEKA 236 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 76/185 (41%), Positives = 107/185 (57%), Gaps = 2/185 (1%) Query: 261 DVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ D+ PE +ARGIEVG IF TKYS + TFK ADG++ + MG YG Sbjct: 386 DLRLVGAGDACPECGTPMAAARGIEVGQIFKLWTKYSEALGCTFKDADGQERPMVMGCYG 445 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R VAAVIE HD KGIIWP SVAP+ + ++ + + R A E++Y +L + G + Sbjct: 446 IGITRTVAAVIEQHHDEKGIIWPMSVAPYHVVVVPVNYAEPDQRQAAERVYGQLLEAGVE 505 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 DD E+ G +F ADL+GFPL+V VG + + + KVE+ R TG + +++ Sbjct: 506 AVLDDRDERPGVKFNDADLIGFPLRVTVGPRGLVEGKVEVVERATGRATPVPVDQAAAEV 565 Query: 439 SHRFS 443 + R Sbjct: 566 ARRVR 570 >gi|163846770|ref|YP_001634814.1| threonyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl] gi|222524584|ref|YP_002569055.1| threonyl-tRNA synthetase [Chloroflexus sp. Y-400-fl] gi|163668059|gb|ABY34425.1| threonyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl] gi|222448463|gb|ACM52729.1| threonyl-tRNA synthetase [Chloroflexus sp. Y-400-fl] Length = 594 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 76/446 (17%), Positives = 142/446 (31%), Gaps = 39/446 (8%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L L+E RD +L L G+ + P G+ + +RE Q R Sbjct: 182 EAYLHRLEEARKRDHRRLGKELGLF-FFSDDIGPGLPIFTPKGEIIRHEMEKFVREVQTR 240 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-DRNDKAMIYGPTHEE-VMTDIFRSH 121 G + + L+ +SG YD+Y M + D P + MT + Sbjct: 241 YGYQHVWTGNVVKEQLYRKSGHYDNYRDSMFPPMVESEDLVFRLKPMNCPSHMTLYNQLG 300 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR+LP F + +R E G+ R R D + F + + ++ Sbjct: 301 VISYRDLPLRFAEFATLYRYEDSGALSGLTRVRALTQDDCHIFCRPDQIQEE-FSLALQV 359 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + +R E + + + + + + Sbjct: 360 IREVLGTYQFTDYKVRLSLRG---------------SEGKYVQDDEKWELATAALRSALE 404 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 VE A Y +D D L ++S ++ G Sbjct: 405 ANGVEYFEVEGEAAFYGPKADFL---ARDVLGREWQLSTIQVDFIQPARLG--------C 453 Query: 301 TFKGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G D K H + G ++ + G +P +AP + +I I Sbjct: 454 EYIGEDDKPHTPVVLHRAVTGTTERFMGILI---EHYGGAFPLWLAPVQAVVIPITDK-- 508 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + ++ RL G V DD +++ + A L P +I+G++ + V ++ Sbjct: 509 -QMEFARQVRQRLFMAGLRVELDDNRDRMQGKIRRAQLQKIPYMLIIGAREEAADSVAVR 567 Query: 420 HRLTGIREDMSLEEVINYASHRFSNN 445 R M ++ + A Sbjct: 568 TRAGEDLGAMPVDAFLARALEEIRTR 593 >gi|209969467|dbj|BAG80638.1| hypothetic protein [Streptococcus parauberis] Length = 395 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 69/421 (16%), Positives = 147/421 (34%), Gaps = 31/421 (7%) Query: 31 MI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSY 89 MI + +G+ WLP G + I +++ +G + P + S +L+ SG ++ Y Sbjct: 1 MISQEVGQGLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPMASVELYKTSGHWEHY 60 Query: 90 GKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFG 148 ++M D D + + P + ++++H+ SYR LP ++ + R E Sbjct: 61 QEDMFPTMDMGDGEEFVLRPMNCPHHIQVYKNHVHSYRELPIRIAELGMMHRYEKSGALS 120 Query: 149 VMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSH 208 ++ + + +TPE + + + + ++ L R Sbjct: 121 GLQRVREMTLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFNLTDYRFRLS---------- 170 Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 + + + + + D++ E A Y D+ ++ Sbjct: 171 ---YRDPKDTHKYYDNDEMWENAQAMLKAALDEMGVDYFEAEGEAAFYGPKLDI---QVK 224 Query: 269 DSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 +L + +S ++ F ++ + GADG++H M G+ + Sbjct: 225 TALGNEETLSTIQLD----FLLPERFD----LKYIGADGEEHRPVMIHRGVISTMERFTA 276 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 I + I ++ D ++ L G DD E++ Sbjct: 277 ILIETYKGAFPTWLAPHQV----TVIPISNEAHIDYAWEVAKTLRDRGIRADVDDRNEKM 332 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF-SNNRP 447 + + P Q+IVG K + D V ++ + S+EE ++ +RP Sbjct: 333 QYKIRASQTSKIPYQLIVGDKEMEDKAVNVRRYGSKATHTESIEEFVDNILADIARKSRP 392 Query: 448 V 448 V Sbjct: 393 V 393 >gi|332830447|gb|EGK03075.1| threonyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286] Length = 650 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 83/445 (18%), Positives = 153/445 (34%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD +L L KG+ WLP G + + +++ Q + Sbjct: 230 EYLIMLEEAKKRDHRKIGKELELFA-FSENVGKGLPLWLPRGTQLRLKLEDFLKKIQRKF 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 ++ P + S L+V SG Y+ YGK+ + + + P + +I++ Sbjct: 289 DYQQVMTPHIGSKILYVTSGHYEKYGKDSFQPIHTPEEGEEFLLKPMNCPHHCEIYKIIP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + +R E G+ R R F DA+ F TPE K + K+ Sbjct: 349 RSYKDLPLRLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFC-TPEQLKAEFLKVMDIV 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 IF L ++ + D + + D + + Sbjct: 408 FIIFKALDFENFEAQISLR--------------DPENREKYIGSDENWEKAERAIIEACE 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + VE A Y D + D+L ++ ++ Sbjct: 454 EKGLPAKVELGEAAFYGPKLDFM---VKDALGRRWQLGTIQVDYNLP--------ERFEL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GAD + H + G+M AV+ GK +W + I + Sbjct: 503 EYTGADNQKHRPVMIHRAPFGSMERFIAVLIEHTAGKFPLW------LAPDQVVILPISE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ + + G DD E+IG + +L P +IVG K +V ++ Sbjct: 557 KFNDYAHRVNSYFKQQGISSQVDDRNEKIGRKIRDNELKRIPYLLIVGEKEAETEEVSVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M + Sbjct: 617 KQGEGDKGSMKFTNFAAQLNEEVEK 641 >gi|125975428|ref|YP_001039338.1| prolyl-tRNA synthetase [Clostridium thermocellum ATCC 27405] gi|152016597|sp|A3DJL6|SYP_CLOTH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|125715653|gb|ABN54145.1| prolyl-tRNA synthetase [Clostridium thermocellum ATCC 27405] Length = 572 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 117/267 (43%), Positives = 159/267 (59%), Gaps = 6/267 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S F L+E P +AEIASH+LMLR G++ + + GIYS+LPLG + + I+REE Sbjct: 1 MRVSNMFFQTLREVPAEAEIASHQLMLRAGLMRKLASGIYSFLPLGYRVFRKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ + L A+ + SGR++ +G EM RL DRN + GPTHEE+ T+ +S Sbjct: 61 MDRAGAQELIMSALLPAESYQASGRWEVFGAEMFRLKDRNGRDFCLGPTHEEIFTETVKS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SYR+LP YQIQ K+RDE RPRFGVMRSREF+MKDAYSFD G SY KM+ + Sbjct: 121 VTRSYRSLPLILYQIQTKYRDERRPRFGVMRSREFVMKDAYSFDRDEAGLDISYKKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS------ 234 Y RIF RLGL I + A++G +GG S EF+V + GE+++ + Sbjct: 181 YCRIFDRLGLDYIIVDADTGAMGGSDSQEFMVKSAVGESRIAYCEACGYAANDEKAECVP 240 Query: 235 ENTDFDDIISLNSIVEQWTAPYAATSD 261 E D +E+ P T + Sbjct: 241 EKCCDDKECCGELGLEKVATPDVRTIE 267 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 70/188 (37%), Positives = 100/188 (53%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 D+ K D+ P+ GIEVGHIF GTKYS + + GK+ + MG Sbjct: 382 VKDIRTIKEGDACPKCGAPVKVEFGIEVGHIFKLGTKYSEALDCIYLDETGKERPMIMGC 441 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R +AAVIE ++D GIIWP S+AP+ + +I + D V + EKIY +L ++G Sbjct: 442 YGIGINRSMAAVIEQNNDENGIIWPISIAPYHVIVIPVNTTDSVQMELAEKIYTQLGEMG 501 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G +F ADL+G P+++ VG + + VE K R + EE I Sbjct: 502 IEVLLDDRDERPGVKFKDADLIGIPIRITVGKR-AGEGIVEYKLRREKDFAAIPYEEAIA 560 Query: 437 YASHRFSN 444 A + Sbjct: 561 KAKKEVAE 568 >gi|126725645|ref|ZP_01741487.1| threonyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150] gi|126704849|gb|EBA03940.1| threonyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150] Length = 649 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 78/433 (18%), Positives = 140/433 (32%), Gaps = 44/433 (10%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD + L + + + G W P G + + +R +Q G +E+ Sbjct: 241 LEEAAKRDHRKLGRDMDLF--HMQEEAPGQVFWHPNGWRIYTTLQDFMRRKQVAGGYVEV 298 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIFRSHIKS 124 + P + LW SG ++ Y + M + R P + IF +KS Sbjct: 299 NTPQVVDRKLWEASGHWEKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNVGLKS 358 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + R E G+MR R F D + F + Sbjct: 359 YRDLPIRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCE-ESQIEEETAIYIEFLTS 417 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I+ LG ++ ++ P S E A+T + Sbjct: 418 IYKDLGFENFRVKFSDRPEVRAGSDEVWDRAET-----------------ALLNATRAAG 460 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y + L D++ + + ++ F + + A + Sbjct: 461 IEPEMNPGEGAFYGPKLEF---VLTDAIGRDWQCGTHQVD----FVLPER----LDANYV 509 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG H + +G+ ++ H GK W S++ Sbjct: 510 GQDGAKHRPVMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASIVT------DAN 563 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D +++ A L G D E+I + L P+ + VG K V++ V ++ Sbjct: 564 DYAQEVVAELRAAGVLAEADIRNEKINYKVREHSLGKVPVILAVGMKEVAERTVSVRRLG 623 Query: 423 TGIREDMSLEEVI 435 L EV+ Sbjct: 624 QKQSTVQELGEVV 636 >gi|315645695|ref|ZP_07898819.1| prolyl-tRNA synthetase [Paenibacillus vortex V453] gi|315279173|gb|EFU42483.1| prolyl-tRNA synthetase [Paenibacillus vortex V453] Length = 576 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 119/232 (51%), Positives = 153/232 (65%), Gaps = 1/232 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ + +++ P +AE SH+ MLR G I Q + GIYS+LPLG + L + IIR+E Sbjct: 1 MRQSQLLMTTMRDMPSEAEALSHQWMLRGGYIRQTAAGIYSYLPLGWRVLRKIEGIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA EM +P +Q A+LW ESGRYD YG E++RL DR+D+ + GPTHEEV+T I R Sbjct: 61 MDAAGAQEMLMPAVQPAELWKESGRYDVYGPELIRLHDRHDREFVLGPTHEEVITSIVRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP YQIQ K+RDE RPRFG++R REFLMKDAYSFD EG SY M+ + Sbjct: 121 EISSYRKLPVNLYQIQSKYRDERRPRFGLLRGREFLMKDAYSFDRDWEGLDVSYRSMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDL-SHEFIVLADTGETQVFCSKDFMDFP 231 Y RIF R GL + A++G IGG +HEF+ LAD GE V +D Sbjct: 181 YERIFERCGLTFRAVEADAGAIGGQGETHEFMALADIGEDTVVSCRDCRYAA 232 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 4/180 (2%) Query: 261 DVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D N K + P RGIE+GH+F GTKYS M+ + +DG++ + MG YG Sbjct: 388 DFRNVKEGEPCPRCGAPLQFHRGIELGHVFKLGTKYSEVMNGMYLDSDGREKPLIMGCYG 447 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG RV+AA+ E G+ ++WP SVAPF++ +I + D+ + E IY L K G + Sbjct: 448 IGVSRVMAAIAEQRISGERLVWPMSVAPFQVHVIPVAVKDEAQMNLAEHIYKELIKAGLE 507 Query: 379 VFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 DD E+ G +F A+ G P ++I+G + + +VE G++ ++ I Sbjct: 508 PLLDDRDERAGVKFKDAESRHGAPQRLIIG-RGAASGEVEWDRVEDGVKVNLPAAAAIQR 566 >gi|42519522|ref|NP_965452.1| threonyl-tRNA synthetase [Lactobacillus johnsonii NCC 533] gi|73919800|sp|Q74IC0|SYT_LACJO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|41583811|gb|AAS09418.1| threonyl-tRNA synthetase [Lactobacillus johnsonii NCC 533] Length = 643 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 75/434 (17%), Positives = 154/434 (35%), Gaps = 36/434 (8%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L L + + G+ W+P G V I +++ G + P L Sbjct: 238 RDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRVVERYIVDKEVADGYEHVYTPVL 295 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y +M D D M P + I++ HI+SYR LP Sbjct: 296 MNVDAYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIA 355 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + + K+ + ++ + Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIREE-FAKVLKLIMDVYKDFDITD 414 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + + + + + DD+ E Sbjct: 415 YYFRLS-------------YRDPKNTDKYYANDEMWETSQSMLKAAMDDLGLDYVEAEGE 461 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ T+ G DG++H Sbjct: 462 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----GLTYVGQDGEEHRP 510 Query: 313 -QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + +G M A + + G W + I +++ + +K+ A Sbjct: 511 VMIHRGIVGTMERFIAYLTEIYKGAFPTWLA-----PVQAEIIPVNEEAHGEYADKVRAE 565 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+K G D E++G + + P +++G + ++ + V ++ T + SL Sbjct: 566 LAKRGFRAEVDHRNEKLGYKIRESQTQKVPYTLVLGDEEMNANGVNVRRYGTEEQISKSL 625 Query: 432 EEVINYASHRFSNN 445 ++ I + Sbjct: 626 DDFIAEIDADVKSY 639 >gi|292670562|ref|ZP_06603988.1| proline-tRNA ligase [Selenomonas noxia ATCC 43541] gi|292647728|gb|EFF65700.1| proline-tRNA ligase [Selenomonas noxia ATCC 43541] Length = 570 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 116/286 (40%), Positives = 164/286 (57%), Gaps = 2/286 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR + + P L+ P +AEIASH+LM R G+I + + G+Y++LPL + + + IIR E Sbjct: 1 MRATNLYAPTLRNTPAEAEIASHRLMYRAGLIRKSAGGMYTYLPLAWRTIRKIEEIIRAE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E+ +P LQ ++LW ESGR+ +YG EM+R+ DR+D+ GPTHEE++T + R Sbjct: 61 MEAVGGQEIMMPILQPSELWEESGRWGAYGAEMIRIKDRHDREFCMGPTHEEMITALVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ KFRDE RPRFG+MRSREF+M+D YSFD EG SY KM+ + Sbjct: 121 ELRSYKQLPVLLYQIQDKFRDERRPRFGIMRSREFIMQDLYSFDEDIEGMNESYRKMYAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP--IPSENTD 238 Y IF R GL + A+SG IGG S EF VLA GE+++ C + Sbjct: 181 YSNIFTRCGLDFRVVEADSGAIGGGRSEEFTVLAPEGESRIACCDACSYAASDEKAALRP 240 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 + +E+ P T + E L + + + A E Sbjct: 241 INAPAETELPLEKVATPGTHTIALLAEYLKIPVEKTIKAVAYQTED 286 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 68/218 (31%), Positives = 102/218 (46%) Query: 226 DFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 M + N +++N + A V +RGIE G Sbjct: 351 MRMHNAVSGANEADFHFLNVNPKRDFGEVTVADIRLVAEGDECPVCGGGHLHISRGIEAG 410 Query: 286 HIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 IF GTKYS M ATF A GK +QMG YGIG R +AA IE +HD GIIWP ++A Sbjct: 411 QIFALGTKYSEAMDATFLDAAGKAQPLQMGCYGIGVGRTMAAAIEQNHDDSGIIWPRAIA 470 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405 P+++ ++ + A E++Y L G D DD E+ G +F DL+G+P+++ Sbjct: 471 PYEVVVVAVNAKVPEQLAYAEEVYEELRAAGVDALLDDRRERAGVKFNDCDLIGYPVRIA 530 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 VG K + +E+K R TG + + + + + Sbjct: 531 VGPKTIESGSIEVKLRRTGELVNFARDTYLKGVQDMLA 568 >gi|291443408|ref|ZP_06582798.1| threonyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998] gi|291346355|gb|EFE73259.1| threonyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998] Length = 658 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 67/442 (15%), Positives = 141/442 (31%), Gaps = 38/442 (8%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD ++L L + + G+ + P G + R G + Sbjct: 252 LEEAAKRDHRKLGNELDLFS-FPDEIGPGLAVFHPKGGVIRRAMEDYSRRRHEEEGYEFV 310 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNL 128 P L+ +SG D Y M +D P + + IF + +SYR L Sbjct: 311 YSPHATKGKLFEKSGHLDWYADGMYPPMQLDDGVDYYLKPMNCPMHNLIFDARGRSYREL 370 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P ++ +R E G+ RSR F DA+ + + ++ ++ L + Sbjct: 371 PLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQMAEEL-DRTLTFVLNLLRD 429 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 GL + + + S + + + + Sbjct: 430 YGLTDFYLELST----------------KDPEKYVGSDETWEEATATLQQVAEKQGLPLV 473 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 A Y + + D++ ++S ++ F ++ + G DG Sbjct: 474 PDPGGAAFYGPKI---SVQCKDAIGRTWQMSTVQLD----FNLPERFD----LEYTGPDG 522 Query: 308 KDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + G++ AV+ + +P +AP + I I + Sbjct: 523 SKQRPVMIHRALFGSIERFFAVLL---EHYAGAFPVWLAPVQAVGIPIG---DAHIPYLQ 576 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + A+ K G V D +++ + P +I G + +++ V ++R Sbjct: 577 EFAAKARKQGLRVDVDASSDRMQKKIRNQQKNKVPFMIIAGDEDMANGAVSFRYRDGSQE 636 Query: 427 EDMSLEEVINYASHRFSNNRPV 448 + ++E I + + V Sbjct: 637 NGIPVDEAIAKIAKAVEDRVQV 658 >gi|227495497|ref|ZP_03925813.1| threonine--tRNA ligase [Actinomyces coleocanis DSM 15436] gi|226831044|gb|EEH63427.1| threonine--tRNA ligase [Actinomyces coleocanis DSM 15436] Length = 665 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 68/456 (14%), Positives = 135/456 (29%), Gaps = 50/456 (10%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + G+ + P G + R+ + G Sbjct: 243 YLHRLSEAEKRDHRKLGTELDLFS-FPDEIGSGLACFHPKGGIIRMEMEEYSRKRHVQAG 301 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLR-------------LADRNDKAMIYGPTHEE 112 + P + L+ +SG Y M + + P + Sbjct: 302 YDFVYSPHITKGALFEKSGHLSWYKDGMYPALSIDEERNPETGEITKAGQDYYLKPMNCP 361 Query: 113 VMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSK 171 + IF S +SYR LP ++ +R E G+ R R F DA+ + + Sbjct: 362 MHNLIFASRGRSYRELPLRLFEFGTVYRYEKSGVVHGLARGRGFTQDDAHIYCTREQMKD 421 Query: 172 HSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 + L + GL + + E + + Sbjct: 422 EL-TSLLTFVLDLLKDYGLNDFYLELST----------------KNEEKFVGDDATWEEA 464 Query: 232 IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 + + A Y + + D++ ++S ++ F Sbjct: 465 TRTLAEVAEASGLQLVPDPGGAAFYGPKI---SVQAKDAIGRTWQMSTIQLD----FNLP 517 Query: 292 TKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 ++ + DG + G++ AV+ + +P +AP ++ Sbjct: 518 ERF----ELEYTAPDGTRQRPVMIHRALFGSIERFFAVLT---EHYAGAFPAWLAPVQVR 570 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 I + + D E+I +L G V D ++ G + A P +I G Sbjct: 571 CIPVA---EKFEDYLEEIAKQLRAEGVRVEIDRSDDRFGKKIRNASKDKVPFTLIAGGDD 627 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 V + V + R + + E + R Sbjct: 628 VDANAVSFRLRDGSQDNQVPVAEAVERILTVIRERR 663 >gi|301300275|ref|ZP_07206484.1| proline--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852116|gb|EFK79791.1| proline--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 570 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 111/282 (39%), Positives = 163/282 (57%), Gaps = 1/282 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P L+E P DAE+ SH+LMLR G I Q + G+Y++LPL + + + IIREE Sbjct: 1 MKQSQMLIPTLKEIPSDAEVVSHQLMLRGGYIKQITAGMYAYLPLAYRVMKKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R A+EM VP + A+LW ESGRY++YG + +L DR+++ I GPTHEE T I R Sbjct: 61 MDRIDAVEMLVPAVVPAELWQESGRYETYGPTLFKLKDRHERDFILGPTHEETFTTIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ+K+RDE RPRFG++R REFLM D YSF + + +N + Sbjct: 121 AIKSYKKLPLYLYQIQMKYRDENRPRFGLLRGREFLMLDGYSFHVDDASMEKVFNDTDKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GL + A+SG +GG+ S EF +A+ GE + S D+ E Sbjct: 181 YQRIFERCGLDFRGIIADSGAMGGNRSKEFQAIAEVGEDTIAYSDS-SDYAANIEMAKNL 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 I + + A + ++ + L + + + + Sbjct: 240 RIPKQSHETPKDLEKVATPNAKTIVEVAEFLGTDTQNEIKTL 281 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 64/173 (36%), Positives = 98/173 (56%), Gaps = 1/173 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 E RGIE+GHIF GT+YS + A +G+ ++MG YGIG R+++A++E Sbjct: 395 GEGVLKFTRGIEIGHIFQLGTRYSESLGADVLDENGRQVPMRMGCYGIGVSRLLSAIVEQ 454 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 +D GI WP +APF I ++ + + R+ EK+ A L G V DD E+ G + Sbjct: 455 HNDENGIAWPREIAPFDIHVVPVNVKNDTQRELSEKVTAMLEDAGYQVLVDDRKERAGVK 514 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 FA +DL+G P+++ VG K + VEIK R G + ++ LEE++N F+ Sbjct: 515 FADSDLIGLPIRITVGKK-ADEGIVEIKLRQNGEKIEVKLEELLNSVKILFNE 566 >gi|309805191|ref|ZP_07699243.1| threonine--tRNA ligase [Lactobacillus iners LactinV 09V1-c] gi|308165425|gb|EFO67656.1| threonine--tRNA ligase [Lactobacillus iners LactinV 09V1-c] Length = 461 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 73/434 (16%), Positives = 154/434 (35%), Gaps = 36/434 (8%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L L + + G+ W+P G + I +++ G + P L Sbjct: 56 RDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRVIERYIIDKEVADGYQHVYTPVL 113 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y ++M D D M P + I+ HI+SYR LP Sbjct: 114 MNLDAYKTSGHWAHYREDMFPPMDMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIA 173 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + K+ + ++ + Sbjct: 174 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVELDQVQSE-FAKILKLIMEVYRDFDITD 232 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + F + + + DD+ E Sbjct: 233 YYFRLS-------------YRDPKNTDKYFANDEMWERSQKMLKGAMDDLGLEYVEAEGE 279 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ + ++ G DG++H Sbjct: 280 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----NLSYVGKDGEEHRP 328 Query: 313 -QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + +G M A + + G W + + I ++ + + + + Sbjct: 329 VMVHRGIVGTMERFIAYLTEIYKGAFPTWLA-----PLQVKIIPVNNDAHGEYAQNVKDQ 383 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L K+G D E++G + A P +++G + + V ++ + +E +L Sbjct: 384 LMKLGFRAEVDFRNEKLGYKIREAQTQKVPYTLVLGDDELQHNSVNVRKYGSEDQESKAL 443 Query: 432 EEVINYASHRFSNN 445 E ++ S ++ Sbjct: 444 SEFVSELSADVASY 457 >gi|296084987|emb|CBI28402.3| unnamed protein product [Vitis vinifera] Length = 688 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 79/448 (17%), Positives = 148/448 (33%), Gaps = 37/448 (8%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L +E R D L L + I + G+ W P G + ++ Sbjct: 268 KAYLHFKEEAKRRDHRRLGQDLDLFS--IQDEAGGGLVFWHPKGAIVRRIIEDSWKKIHI 325 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P + ADLW SG D Y + M D+ P + I++ + Sbjct: 326 EHGYDLLYTPHVARADLWKTSGHLDFYRENMYSQITIEDELYQLRPMNCPYHILIYKRKL 385 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+ P ++ +R EL G+ R R F DA+ F L + + Sbjct: 386 HSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDE-IRGVLDLT 444 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I + G + + P + + D + + DD Sbjct: 445 EEILLQFGFSKYEVNLSTRP-----------------EKAVGADDIWEKATSALRDALDD 487 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARG---IEVGHIFYFGTKYSLPM 298 I E A Y D+ K+ D+L + S +++ Sbjct: 488 KGWSYRIDEGGGAFYGPKIDL---KIEDALGRKWQCSTIQANRLDLSFTKEVDFNLPQRF 544 Query: 299 SATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ ++ + + +G++ V+ + +P ++P + ++ + Sbjct: 545 DITYVDSNSEKQRPIMIHRAVLGSLERFFGVLI---EHYAGDFPLWLSPIQARVLPVT-- 599 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + C ++ +L G GE++ ++ PL +VG K V V Sbjct: 600 -DTQLEYCNEVTNKLKANGIRAEV-CHGERLPKLIRNSEKQRIPLMAVVGPKEVETQTVT 657 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ R G M +E+ I+ N Sbjct: 658 VRSRFGGELGTMIVEDFISRTKSATENR 685 >gi|169351009|ref|ZP_02867947.1| hypothetical protein CLOSPI_01786 [Clostridium spiroforme DSM 1552] gi|169292071|gb|EDS74204.1| hypothetical protein CLOSPI_01786 [Clostridium spiroforme DSM 1552] Length = 606 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 68/432 (15%), Positives = 150/432 (34%), Gaps = 39/432 (9%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD + +L L M+ +++ G+ +LP G + + EE + G + + P + Sbjct: 211 RDHKKIGKELGLF--MMSEYAPGMPIFLPKGMILRNTLEQFWYEEHTKEGYVFIKTPIMM 268 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 S +LW SG + +Y +M +D+ P + ++++ + SY++LP ++ Sbjct: 269 SRELWETSGHWANYKDDMYTSM-VDDREFAIKPMNCPGSLLVYKNGLHSYKDLPLRMGEL 327 Query: 136 QLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIP 194 R E G+ R R F DA+ F +TP+ + K+ R+++ L L Sbjct: 328 GQVHRHEASGALNGLFRVRTFTQDDAHIF-MTPDQIESEIIKLINFIDRVYNSLNLSYEI 386 Query: 195 MRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTA 254 + P E + + + I A Sbjct: 387 -ELSTRP----------------EEKYIGDLAIWEKSEAALAAACKAAGKDYKINPGDGA 429 Query: 255 PYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD-HYVQ 313 Y D H + DSL + +++ T+ G+ V Sbjct: 430 FYGPKLDFH---VKDSLGRVWQCGTIQLDMNLP--------ERFDITYIDDKGEKARPVM 478 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 + G++ ++ G +W + + + +++ + +++ L Sbjct: 479 LHRVIFGSIERFIGILIEHFAGVFPLWLA-----PVQVKVLPVNNEYHLEYAKEVTKLLQ 533 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G V D E++G + + P +++G+ + V + + + +E Sbjct: 534 EAGLKVEMDAREEKLGYRIREGQMEKVPYLLVLGNNERDEKTVTYRQHGQQKQITVPFDE 593 Query: 434 VINYASHRFSNN 445 ++ N Sbjct: 594 FVSMLKKEIENK 605 >gi|227488647|ref|ZP_03918963.1| prolyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867] gi|227543250|ref|ZP_03973299.1| prolyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866] gi|227091541|gb|EEI26853.1| prolyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867] gi|227181059|gb|EEI62031.1| prolyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866] Length = 588 Score = 226 bits (576), Expect = 6e-57, Method: Composition-based stats. Identities = 95/221 (42%), Positives = 135/221 (61%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G I + + G+Y+WLPLG + L + I+REE Sbjct: 4 RLSTLFLRTLREDPADAEVPSHKLLVRAGYIRRVAPGVYTWLPLGLRVLRKIENIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + + R+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 64 NAIGGQELRFPALLPREPYELTQRWTEYGNSLFRLKDRKGNDMLLGPTHEEMFTQVVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ K+RDE RPR G++R REF+MKD+YSF++ EG SY +Y Sbjct: 124 YSSYKDFPVLLYQIQTKYRDEERPRAGILRGREFVMKDSYSFNMDDEGLDESYQNHRQAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 IF+RLGL + +A SG +GG S EF+ +++ GE Sbjct: 184 QNIFNRLGLDYVICKATSGAMGGSASEEFLAVSENGEDTFV 224 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 6/188 (3%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 + + D P RGIE+GHIF G KY+ M +GK MGSY Sbjct: 400 IEAAEVREGDPAPNGTGTLTLQRGIEIGHIFQLGRKYTTAMDVQILDENGKRSVPTMGSY 459 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R +A ++E S+D KG++WP VAP+ + ++ D+ +DA EK+ A L G Sbjct: 460 GIGVSRAMAVIVEQSYDDKGLVWPACVAPYHVHVVVAN-KDKEAQDAAEKLVADLDAAGI 518 Query: 378 DVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V +DD G +F A+LLG P V++G + D ++E + R G + ++ + Sbjct: 519 EVLFDDRPKVSPGVKFKDAELLGIPYTVVLG-RAFKDGEIEFRVRA-GETSTIPVDGALE 576 Query: 437 YASHRFSN 444 + Sbjct: 577 HIVTTVRE 584 >gi|172039373|ref|YP_001805874.1| prolyl-tRNA synthetase [Cyanothece sp. ATCC 51142] gi|171700827|gb|ACB53808.1| prolyl-tRNA synthetase [Cyanothece sp. ATCC 51142] Length = 623 Score = 226 bits (576), Expect = 6e-57, Method: Composition-based stats. Identities = 113/240 (47%), Positives = 152/240 (63%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + GIY++LPL + L V+ I+REE Sbjct: 21 MRLSQMLFVTLREDPAEAEIPSHKLLLRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREE 80 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N GA E +P LQ ++LW ESGR+++Y K M L DR D+ + GPTHEEV+T + Sbjct: 81 MNAAGAQECLLPQLQPSELWKESGRWETYTKAEGIMFSLIDRQDRELGLGPTHEEVITTV 140 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF+ + SY+ M Sbjct: 141 AKDMIRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFNEDEASLQRSYDAM 200 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y I R GL + A+SG IGG S EF++LA+ GE +V ++D + E Sbjct: 201 DQAYRNIISRCGLAYRAVEADSGAIGGSASQEFMILAEAGEDEVLYTEDG-KYAANVEKA 259 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 61/171 (35%), Positives = 101/171 (59%), Gaps = 1/171 (0%) Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 SARGIEVGHIF GTKYS M ATF +G++ + MG YG+G R+ A +E S+D Sbjct: 451 LASARGIEVGHIFQLGTKYSEAMGATFTDENGEEKPIVMGCYGVGVSRLAQAAVEQSYDK 510 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 GIIWP ++AP+++ +I +DQ + + +Y +L+K+G + DD E+ G +F A Sbjct: 511 DGIIWPVAIAPYQVIIIVPNINDQNQIEVAQNLYDKLNKMGVETLLDDRDERAGVKFKDA 570 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 DL+G P +V+ G + + KVE+ R + +++ ++ ++ + + Sbjct: 571 DLIGIPYRVVTG-RSLKSGKVEVVTRKSKESQEIEVKNLVETLHNWVEQGK 620 >gi|282858709|ref|ZP_06267863.1| threonine--tRNA ligase [Prevotella bivia JCVIHMP010] gi|282588513|gb|EFB93664.1| threonine--tRNA ligase [Prevotella bivia JCVIHMP010] Length = 649 Score = 226 bits (576), Expect = 6e-57, Method: Composition-based stats. Identities = 79/445 (17%), Positives = 158/445 (35%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L + KG+ WLP G + + ++R+ Sbjct: 232 EYLVMLEEAKKRDHRKIGKEMELFM-FSDRVGKGLPIWLPKGTQLRLRLQDLLRKLLKPY 290 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + S +L+V SG Y YGK+ + D+ + P + +I+ Sbjct: 291 NYQEVITPGIGSKNLYVTSGHYAHYGKDAFQPIQTPEEDEEYMLKPMNCPHHCEIYAHKP 350 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + +R E G+ R R F DA+ F P+ K + Sbjct: 351 RSYKDLPLRIAEFGTVYRYEKSGELHGLTRVRNFTQDDAHIFVR-PDQVKAEFENNIDII 409 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L++F G ++ + D + + + +D + + Sbjct: 410 LKVFKTFGFENYEAQISLR--------------DPEDKEKYIGEDDVWNESEQAIKEACA 455 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + VE A Y D + D++ ++ ++ F Sbjct: 456 EKGLKATVELGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLPQRF--------HL 504 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D + G+M AV+ G +W + I + Sbjct: 505 EYTAEDNTKKTPVMVHRAPFGSMERFTAVLIEHTAGHFPLW------LTPDQVAILPISE 558 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ +L G DD E+IG + +L P V+VG K ++ V ++ Sbjct: 559 KYNDYAREVMQKLDTAGVRALIDDRNEKIGRKIRDNELKRIPYMVVVGEKEAAEGLVAMR 618 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M++++ I+ + + Sbjct: 619 KQGGGEQSTMTIQQFIDRVNAEVAE 643 >gi|329667761|gb|AEB93709.1| threonyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026] Length = 643 Score = 226 bits (576), Expect = 6e-57, Method: Composition-based stats. Identities = 75/434 (17%), Positives = 154/434 (35%), Gaps = 36/434 (8%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L L + + G+ W+P G V I +++ G + P L Sbjct: 238 RDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRVVERYIVDKEVADGYEHVYTPVL 295 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y +M D D M P + I++ HI+SYR LP Sbjct: 296 MNVDAYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIA 355 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + + K+ + ++ + Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIREE-FAKVLKLIMDVYKDFDITD 414 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + + + + + DD+ E Sbjct: 415 YYFRLS-------------YRDPKNTDKYYANDEMWETSQSMLKAAMDDLGLDYVEAEGE 461 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ T+ G DG++H Sbjct: 462 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----GLTYVGQDGEEHRP 510 Query: 313 -QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + +G M A + + G W + I +++ + +K+ A Sbjct: 511 VMIHRGIVGTMERFIAYLTEIYKGAFPTWLA-----PVQAEIIPVNEEAHGEYADKVRAE 565 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+K G D E++G + + P +++G + ++ + V ++ T + SL Sbjct: 566 LAKRGFRAEVDHRNEKLGYKIRESQTQKVPYTLVLGDEEMNANGVNVRRYGTEEQISKSL 625 Query: 432 EEVINYASHRFSNN 445 ++ I + Sbjct: 626 DDFIAEIDADVKSY 639 >gi|227877040|ref|ZP_03995129.1| theronyl-tRNA synthetase [Lactobacillus crispatus JV-V01] gi|256843644|ref|ZP_05549132.1| threonyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN] gi|256850110|ref|ZP_05555540.1| threonyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US] gi|293381761|ref|ZP_06627738.1| threonyl-tRNA synthetase [Lactobacillus crispatus 214-1] gi|227863358|gb|EEJ70788.1| theronyl-tRNA synthetase [Lactobacillus crispatus JV-V01] gi|256615064|gb|EEU20265.1| threonyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN] gi|256713082|gb|EEU28073.1| threonyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US] gi|290921681|gb|EFD98706.1| threonyl-tRNA synthetase [Lactobacillus crispatus 214-1] Length = 644 Score = 226 bits (576), Expect = 6e-57, Method: Composition-based stats. Identities = 76/434 (17%), Positives = 148/434 (34%), Gaps = 36/434 (8%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L + + G+ W+P G V I + + G + P L Sbjct: 239 RDHRTIGRDLDFF--FVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYQHVYTPVL 296 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y +M D D M P + I++ HI+SYR+LP Sbjct: 297 MNLDAYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVA 356 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + K+ + ++ + Sbjct: 357 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQTE-FAKILKLIMDVYKDFDITD 415 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + F + + + DD+ E Sbjct: 416 YYFRLS-------------YRDPKNTDKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGE 462 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ T+ G DG++H Sbjct: 463 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----GLTYVGQDGEEHRP 511 Query: 313 -QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + +G M A + + G W + + I + + EK+ Sbjct: 512 VMIHRGIVGTMERFIAYLTEIYKGAFPTWLA-----PVQVKIIPVNLDAHGEYAEKVRQE 566 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+K G D E++G + + P +++G + + + V ++ T SL Sbjct: 567 LAKRGFRAEVDTRNEKMGYKIRESQTQKVPYTLVLGDEEMKNGSVNVRRYGTDEEISKSL 626 Query: 432 EEVINYASHRFSNN 445 + IN + Sbjct: 627 TDFINEIDADVKSY 640 >gi|256545863|ref|ZP_05473219.1| threonine--tRNA ligase [Anaerococcus vaginalis ATCC 51170] gi|256398559|gb|EEU12180.1| threonine--tRNA ligase [Anaerococcus vaginalis ATCC 51170] Length = 641 Score = 226 bits (576), Expect = 6e-57, Method: Composition-based stats. Identities = 73/442 (16%), Positives = 138/442 (31%), Gaps = 42/442 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 ++ + +E R D ++ L + H + G + G + + G Sbjct: 233 YIELQEEAKRRDHRKIGKEMNLFS--FHDEAPGFPFFKENGMILRHELLNWWTDVLAENG 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + +LW SG +D Y + M + + P + ++ SY Sbjct: 291 YGEIQTPLIMNEELWHRSGHWDHYKENM-YFTKIDGENYAVKPMNCPGSVLVYGEEPHSY 349 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R EL G+ R R F DA+ + L + + + Sbjct: 350 RDLPIRLAEYGQVHRHELSGALHGLFRVRTFTQDDAHVYCLPSQVKDEVFKM-IDLADLL 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K + P E DF + + Sbjct: 409 YSTFGFKYKI-ELSTRPDDFMGKIE-----------------EWDFAEKALEDALIERGI 450 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 +I + A Y D H E + R + G I + T+ Sbjct: 451 EYTINPKDGAFYGPKIDFHLEDA----------AKRTWQCGTI-QLDFQLPQNFDLTYID 499 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G+ + +G++ + G+ +W + I D Sbjct: 500 ENGEKKRPVMLHRALLGSIERFIGSVTEQFAGRFPLW------INPKQVEIIPVSDKFAD 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + ++ K G V D E +G + A L+ ++VG K+ +++R Sbjct: 554 FADDLAKKIKKAGYRVEVDHRSEGVGYKIRQAQLMRTNYMLVVGENEEKSGKLTVRNRDG 613 Query: 424 GIREDMSLEEVINYASHRFSNN 445 +D+S EE I N Sbjct: 614 EETKDVSFEEFIEKLDEERDNK 635 >gi|227890630|ref|ZP_04008435.1| prolyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741] gi|227867568|gb|EEJ74989.1| prolyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741] gi|300214372|gb|ADJ78788.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) [Lactobacillus salivarius CECT 5713] Length = 571 Score = 226 bits (576), Expect = 6e-57, Method: Composition-based stats. Identities = 111/282 (39%), Positives = 163/282 (57%), Gaps = 1/282 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P L+E P DAE+ SH+LMLR G I Q + G+Y++LPL + + + IIREE Sbjct: 1 MKQSQMLIPTLKEIPSDAEVVSHQLMLRGGYIKQITAGMYAYLPLAYRVMKKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R A+EM VP + A+LW ESGRY++YG + +L DR+++ I GPTHEE T I R Sbjct: 61 MDRIDAVEMLVPAVVPAELWQESGRYETYGPTLFKLKDRHERDFILGPTHEETFTTIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ+K+RDE RPRFG++R REFLM D YSF + + +N + Sbjct: 121 AIKSYKKLPLYLYQIQMKYRDENRPRFGLLRGREFLMLDGYSFHVDDASMEKVFNDTDKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GL + A+SG +GG+ S EF +A+ GE + S D+ E Sbjct: 181 YQRIFERCGLDFRGIIADSGAMGGNRSKEFQAIAEVGEDTIAYSDS-SDYAANIEMAKNL 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 I + + A + ++ + L + + + + Sbjct: 240 RIPKQSHETPKDLEKVATPNAKTIVEVAEFLGTDTQNEIKTL 281 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 64/173 (36%), Positives = 98/173 (56%), Gaps = 1/173 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 E RGIE+GHIF GT+YS + A +G+ ++MG YGIG R+++A++E Sbjct: 396 GEGVLKFTRGIEIGHIFQLGTRYSESLGADVLDENGRQVPMRMGCYGIGVSRLLSAIVEQ 455 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 +D GI WP +APF I ++ + + R+ EK+ A L G V DD E+ G + Sbjct: 456 HNDENGIAWPREIAPFDIHVVPVNVKNDTQRELSEKVTAMLEDAGYQVLVDDRKERAGVK 515 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 FA +DL+G P+++ VG K + VEIK R G + ++ LEE++N F+ Sbjct: 516 FADSDLIGLPIRITVGKK-ADEGIVEIKLRQNGEKIEVKLEELLNSVKILFNE 567 >gi|333028319|ref|ZP_08456383.1| putative threonyl-tRNA synthetase [Streptomyces sp. Tu6071] gi|332748171|gb|EGJ78612.1| putative threonyl-tRNA synthetase [Streptomyces sp. Tu6071] Length = 580 Score = 226 bits (576), Expect = 6e-57, Method: Composition-based stats. Identities = 69/439 (15%), Positives = 134/439 (30%), Gaps = 36/439 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD ++L L + + G+ + P G + R G + Sbjct: 176 EAEKRDHRKLGNELDLFS-FPEEVGPGLAVFHPKGGIIRRAMEDYSRRRHEEEGYEFVYS 234 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P L+ +SG D Y M P + + IF + +SYR LP Sbjct: 235 PHTTKGALFEKSGHLDWYADGMYPPMQLDEGVDYYLKPMNCPMHNLIFDARGRSYRELPL 294 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 ++ +R E G+ RSR F DA+ + + ++ +K L + G Sbjct: 295 RLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQMAEEL-DKTLTFVLNLLRDYG 353 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 L + + E + S + + + + Sbjct: 354 LDDFYLELST----------------KDEKKFVGSDEVWEEATATLQQVAEKQGLPLVPD 397 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y + + D++ ++S ++ F ++ L +A + Sbjct: 398 PGGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FNLPERFDLSYTAA---DGSRQ 447 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + G++ AV+ + P +AP + I + ++ Sbjct: 448 RPVMIHRALFGSIERFFAVLL---EHYAGAMPPWLAPVQAVGIPVG---DAHVPYLKEFA 501 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 A + G V D +++ + P VIVG ++ V +HR + Sbjct: 502 AEARRKGLRVDVDASSDRMQKKIRNHQKQKTPFMVIVGDDDMNAGTVSFRHRDGSQENGI 561 Query: 430 SLEEVINYASHRFSNNRPV 448 +E I V Sbjct: 562 PKDEAIAKLLDVVERRVQV 580 >gi|257898235|ref|ZP_05677888.1| prolyl-tRNA synthetase [Enterococcus faecium Com15] gi|293570616|ref|ZP_06681667.1| prolyl-tRNA synthetase [Enterococcus faecium E980] gi|257836147|gb|EEV61221.1| prolyl-tRNA synthetase [Enterococcus faecium Com15] gi|291609287|gb|EFF38558.1| prolyl-tRNA synthetase [Enterococcus faecium E980] Length = 569 Score = 226 bits (576), Expect = 6e-57, Method: Composition-based stats. Identities = 114/273 (41%), Positives = 160/273 (58%), Gaps = 3/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK +P L+E P DAE+ SH+++LR G I Q S GIYS+LPL + L+ + I+REE Sbjct: 1 MRQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVSAGIYSYLPLANRVLEKLKRIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM +P + A+LW ESGRY++YG + R DRND+ MI GPTHEE TD+ R+ Sbjct: 61 FEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRNDRKMILGPTHEETFTDLMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPRFG++R REF+MKDAYSF T E +Y + Sbjct: 121 EINSYKKLPLNLYQIQPKYRDEKRPRFGLLRGREFIMKDAYSFHATEESLDETYKDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--D 238 Y +F R GL+ + + G +GG S EF+ +++ GE + C D+ E Sbjct: 181 YTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAISEIGEDTI-CYSTESDYAANLEMATSY 239 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + S + +E + F S+ Sbjct: 240 YVSKKSHETQLELEKVATPNVKSIDEVADFFSV 272 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 70/231 (30%), Positives = 118/231 (51%), Gaps = 6/231 (2%) Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP-YAATSDVHNEKLFDSLPEN 274 + + +V+ + D T ++ V + D+ + D P+N Sbjct: 339 SDDVKVYADRYVQDLANAI--TGANETGFHYKNVNPERDFTVLSYEDLRFVQEGDPSPDN 396 Query: 275 KRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 V RGIE+GHIF GT+YS M AT +G++ +V MG YGIG R+++A++E Sbjct: 397 NGVLAFTRGIEIGHIFKIGTRYSESMGATVLDENGREKFVIMGCYGIGVSRLLSAIVEQH 456 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 D +GI WP +APF + ++ + D+ + ++ ++K G +V DD E+ G +F Sbjct: 457 SDEQGINWPKGIAPFDLHIVQMNLKDEYQTNLTNELEEAMTKAGYEVLVDDRNERAGVKF 516 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 A +DL+G P+++ VG K V D VE+K + TG ++ EE+ N + Sbjct: 517 ADSDLIGCPIRITVGKKAV-DGIVEVKIKKTGEMVEVRKEELANTLPILLN 566 >gi|225849769|ref|YP_002730003.1| prolyl-tRNA synthetase [Persephonella marina EX-H1] gi|254782911|sp|C0QTI8|SYP_PERMH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|225645347|gb|ACO03533.1| prolyl-tRNA synthetase [Persephonella marina EX-H1] Length = 563 Score = 226 bits (576), Expect = 6e-57, Method: Composition-based stats. Identities = 110/251 (43%), Positives = 157/251 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF+P L+E P +AE+ SH ++R G I Q + G+Y +LPLG + L + IIR+ Sbjct: 1 MRASQYFIPTLKEAPAEAEVPSHIYLIRAGFIRQLAAGLYEYLPLGFRVLKKIEGIIRKY 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P L A+LW E+GR+D YGKE+ R+ DR + GPTHEE +TD+ R Sbjct: 61 MDDAGALEVLLPILAPAELWQETGRWDVYGKELFRVEDRKGRFFALGPTHEETITDLVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I+SY++LP FYQIQ KFRDE RPR+G++R REF+MKDAYSFD++ E + SY M + Sbjct: 121 NIRSYKDLPKNFYQIQTKFRDEARPRYGLIRGREFIMKDAYSFDISEEMAVKSYEIMKEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF LGL + + A+ G IGG SHEF+V GE + + Sbjct: 181 YKKIFDELGLDYLMVEADVGAIGGKYSHEFVVKVPNGEAHIVFCDNCGYAANVEAAKYEF 240 Query: 241 DIISLNSIVEQ 251 ++ L E+ Sbjct: 241 ELDKLPPEDEK 251 Score = 163 bits (412), Expect = 6e-38, Method: Composition-based stats. Identities = 78/247 (31%), Positives = 122/247 (49%), Gaps = 4/247 (1%) Query: 194 PMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT 253 A S + E V + V+ D + +D +N + + Sbjct: 316 CHLASSEELKDLGIVEGFVGPMGLDIPVYADISVKDLHNFVVGANEEDYHYINVNIPRDF 375 Query: 254 APYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 P D + D P K G+EVGHIF GTKYS + A F DG++ Sbjct: 376 KPV-DFVDFSTAREGDPCPVCKKPLNETTGLEVGHIFLLGTKYSEALKAYFVDKDGREKP 434 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + MG YGIG R++AA +E SHD GIIWP+++APFK+ ++ + D + E IY + Sbjct: 435 IVMGCYGIGVSRLMAAAVEQSHDENGIIWPENIAPFKLHILALNIKDDQIKTVAEDIYTK 494 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 + G +V +DD G++F ADL+G P +++VG + V + KVEI+ R G +E++ + Sbjct: 495 AKEKGIEVLFDDRDISPGAKFKDADLIGIPYRIVVG-RGVKNGKVEIQTRKDGKKEEIDI 553 Query: 432 EEVINYA 438 E+ N+ Sbjct: 554 NEIDNFL 560 >gi|268319910|ref|YP_003293566.1| threonyl-tRNA synthetase 1 [Lactobacillus johnsonii FI9785] gi|262398285|emb|CAX67299.1| threonyl-tRNA synthetase 1 [Lactobacillus johnsonii FI9785] Length = 643 Score = 226 bits (576), Expect = 6e-57, Method: Composition-based stats. Identities = 75/434 (17%), Positives = 154/434 (35%), Gaps = 36/434 (8%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L L + + G+ W+P G V I +++ G + P L Sbjct: 238 RDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRVVERYIVDKEVADGYEHVYTPVL 295 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y +M D D M P + I++ HI+SYR LP Sbjct: 296 MNVDAYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIA 355 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + + K+ + ++ + Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIREE-FAKVLKLIMDVYKDFDITD 414 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + + + + + DD+ E Sbjct: 415 YYFRLS-------------YRDPKNTDKYYANDEMWEKSQSMLKAAMDDLGLDYVEAEGE 461 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ T+ G DG++H Sbjct: 462 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----GLTYVGQDGEEHRP 510 Query: 313 -QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + +G M A + + G W + I +++ + +K+ A Sbjct: 511 VMIHRGIVGTMERFIAYLTEIYKGAFPTWLA-----PVQAEIIPVNEEAHGEYADKVRAE 565 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+K G D E++G + + P +++G + ++ + V ++ T + SL Sbjct: 566 LAKRGFRAEVDHRNEKLGYKIRESQTQKVPYTLVLGDEEMNANGVNVRRYGTEEQISKSL 625 Query: 432 EEVINYASHRFSNN 445 ++ I + Sbjct: 626 DDFIAEIDADVKSY 639 >gi|73662814|ref|YP_301595.1| prolyl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|114152258|sp|Q49X48|SYP_STAS1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|72495329|dbj|BAE18650.1| prolyl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 566 Score = 226 bits (576), Expect = 6e-57, Method: Composition-based stats. Identities = 115/237 (48%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P ++E P AE SH+L+L+ G+I Q + GIYS+LPL + L+N+ AI+REE Sbjct: 1 MKQSKVFIPTMKEVPAGAEALSHRLLLKAGLIKQSTSGIYSYLPLAARVLNNIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T I R Sbjct: 61 MERIDAVEILMPALQQAELWEESGRWSAYGPELMRLQDRNGREFALGPTHEEVVTSIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ K+RDE RPRFG++R REF+MKDAYSF + SY M+ + Sbjct: 121 ELKSYKQLPLTLFQIQSKYRDEKRPRFGLLRGREFIMKDAYSFHADEDSLDASYQDMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R+G+ + P+ A+SG IGG +HEF+ L++ GE + S+ D+ E Sbjct: 181 YGRIFKRVGINARPVVADSGAIGGSHTHEFMALSEIGEDTIVYSEQ-SDYAANIEKA 236 Score = 162 bits (411), Expect = 7e-38, Method: Composition-based stats. Identities = 71/164 (43%), Positives = 103/164 (62%), Gaps = 2/164 (1%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E ++D GIIW Sbjct: 404 GIEVGQVFKLGTKYSESMNATFLDNQGKAQPLLMGCYGIGVSRTLSAIVEQNNDENGIIW 463 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P SV PF + LI I R+ +++Y +L + DV +DD E+ G +F ADL+G Sbjct: 464 PKSVTPFDLHLITINPKKDDQRELADQLYTQLKE-NYDVLYDDRKERAGVKFNDADLIGL 522 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 P++V+VG K ++ VE+K R TG ED+ ++ +INY + +SN Sbjct: 523 PVRVVVG-KNAAEGIVEVKRRDTGESEDVHVDNLINYVNTLYSN 565 >gi|302533417|ref|ZP_07285759.1| threonyl-tRNA synthetase [Streptomyces sp. C] gi|302442312|gb|EFL14128.1| threonyl-tRNA synthetase [Streptomyces sp. C] Length = 658 Score = 226 bits (575), Expect = 6e-57, Method: Composition-based stats. Identities = 66/440 (15%), Positives = 140/440 (31%), Gaps = 38/440 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD ++L L + + + G+ + P G + R G + Sbjct: 254 EAEKRDHRKLGNELDLFS-IPDEIGSGLAVFHPRGGIIRRVMEDYSRRRHEEEGYEFVYS 312 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P L+ +SG D Y + M P + + IF + +SYR LP Sbjct: 313 PHATKGALFEKSGHLDWYAEGMYPPMQLDGGTDYYLKPMNCPMHNLIFDARGRSYRELPL 372 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 ++ +R E G+ R+R F DA+ + + ++ ++ L + G Sbjct: 373 RLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQMAEEL-DRTLTFVLNLLRDYG 431 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 L + + + S + + + + Sbjct: 432 LTDFYLELST----------------KDPEKFVGSDEVWEEATAVLQQVAEKQGLPLTPD 475 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y + + D++ ++S ++ F ++ + G DG Sbjct: 476 PGGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FNLPERFD----LEYTGPDGSR 524 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + G++ AV+ + P +AP + I I + ++ Sbjct: 525 QRPVMIHRALFGSIERFFAVLL---EHYAGAMPPWLAPVQAVGIPIGDGH---VEYLQEF 578 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 A K G V D +++ + L P +IVG + ++ V ++R Sbjct: 579 AAAAKKQGLRVEVDASSDRMQKKIRNHQKLKVPFMIIVGDEDMAAGTVSFRYRDGSQENG 638 Query: 429 MSLEEVINYASHRFSNNRPV 448 + +E + + ++ V Sbjct: 639 IPKDEALAKLAKVVADRVQV 658 >gi|298373605|ref|ZP_06983594.1| threonine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058] gi|298274657|gb|EFI16209.1| threonine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058] Length = 650 Score = 226 bits (575), Expect = 6e-57, Method: Composition-based stats. Identities = 83/437 (18%), Positives = 158/437 (36%), Gaps = 38/437 (8%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L T KG+ WLP G + +++ Q R G ++ P Sbjct: 242 AKKRDHRKIGKELELFT-FSDMVGKGLPLWLPKGTDLRLRLENFLKKLQKRYGYQQVITP 300 Query: 73 TLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 + + L+V SG + YGK+ + + + P + +I++S KSY++LPF Sbjct: 301 HIGAKQLYVTSGHWAKYGKDSFQPIQTPEEGEEYLLKPMNCPHHCEIYKSTPKSYKDLPF 360 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + +R E G+ R R F DA+ F P+ K + K+ L IF L Sbjct: 361 RVAEFGTVYRYEQSGELHGLTRVRSFTQDDAHLFCR-PDQIKEEFIKVMEIILIIFKALR 419 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + D + + + D + + L ++V Sbjct: 420 FDNFEAQISLR--------------DKVDREKYIGSDENWEKAENAIIEACRETGLKAVV 465 Query: 250 E-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 E A Y D + D+L ++ ++ + GAD + Sbjct: 466 EYGEAAFYGPKLDFM---VKDALGRRWQLGTIQVDYNLP--------ERFELEYTGADNQ 514 Query: 309 DHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 H + G+M AV+ GK +W + + + + ++ Sbjct: 515 KHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLWLTPEQAVVLPI------SEKFNEYAQQ 568 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + +RL+ + D E+IG + +L P +IVG+ + + V ++ + G + Sbjct: 569 VASRLNILDVRAIGDFRDEKIGRKIRDNELKHIPYLLIVGNDEMETNTVAVRRQGEGDKG 628 Query: 428 DMSLEEVINYASHRFSN 444 M ++E + + Sbjct: 629 KMKVDEFAKMINDEVNE 645 >gi|239939977|ref|ZP_04691914.1| threonyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998] gi|239986461|ref|ZP_04707125.1| threonyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379] Length = 653 Score = 226 bits (575), Expect = 6e-57, Method: Composition-based stats. Identities = 67/442 (15%), Positives = 141/442 (31%), Gaps = 38/442 (8%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD ++L L + + G+ + P G + R G + Sbjct: 247 LEEAAKRDHRKLGNELDLFS-FPDEIGPGLAVFHPKGGVIRRAMEDYSRRRHEEEGYEFV 305 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNL 128 P L+ +SG D Y M +D P + + IF + +SYR L Sbjct: 306 YSPHATKGKLFEKSGHLDWYADGMYPPMQLDDGVDYYLKPMNCPMHNLIFDARGRSYREL 365 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P ++ +R E G+ RSR F DA+ + + ++ ++ L + Sbjct: 366 PLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQMAEEL-DRTLTFVLNLLRD 424 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 GL + + + S + + + + Sbjct: 425 YGLTDFYLELST----------------KDPEKYVGSDETWEEATATLQQVAEKQGLPLV 468 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 A Y + + D++ ++S ++ F ++ + G DG Sbjct: 469 PDPGGAAFYGPKI---SVQCKDAIGRTWQMSTVQLD----FNLPERFD----LEYTGPDG 517 Query: 308 KDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + G++ AV+ + +P +AP + I I + Sbjct: 518 SKQRPVMIHRALFGSIERFFAVLL---EHYAGAFPVWLAPVQAVGIPIG---DAHIPYLQ 571 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + A+ K G V D +++ + P +I G + +++ V ++R Sbjct: 572 EFAAKARKQGLRVDVDASSDRMQKKIRNQQKNKVPFMIIAGDEDMANGAVSFRYRDGSQE 631 Query: 427 EDMSLEEVINYASHRFSNNRPV 448 + ++E I + + V Sbjct: 632 NGIPVDEAIAKIAKAVEDRVQV 653 >gi|291519633|emb|CBK74854.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Butyrivibrio fibrisolvens 16/4] Length = 588 Score = 226 bits (575), Expect = 7e-57, Method: Composition-based stats. Identities = 72/443 (16%), Positives = 148/443 (33%), Gaps = 36/443 (8%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 L +L+E RD + L M +G+ +LP G + IR ++ + G Sbjct: 174 LALLEEAKERDHRKIGKDMQLF--MADDLIGRGLPMYLPNGYTIWTELENYIRNKERKLG 231 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + + P + + L+ SG +D Y + M + ++ + P + IF + SY Sbjct: 232 YLHVMTPCVGTVQLYQTSGHWDHYKENMFPAMEVEGESFVLRPMNCPHHMRIFANRPHSY 291 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 + LP +I FR E G+ R R F D++ F + + Sbjct: 292 KELPIRIAEIAHDFRFESSGTLKGIERGRHFCQNDSHIFCTQEQIKSE-VKSVCDLIFST 350 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDII 243 + G+ D +T+ + D + + +I Sbjct: 351 YEDFGITDYRCVLSLR--------------DPADTKKYHQDDEMWNTAEQALRETLTEIG 396 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y DV + ++ +S ++ F K+ T+ Sbjct: 397 IEFTEEIGEAAFYGPKLDV---NVKPAIGNEITLSTCQLD----FCLPAKFD----LTYT 445 Query: 304 G-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 K V + +G++ A I + P +AP ++ ++ +K D Sbjct: 446 DADSNKQTPVVIHRAILGSLDRFMAYIL---EETKGNLPLWLAPTQVKVLPVKNDDADLN 502 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +K+ L+ V +D E++G + A + P ++G ++ V + Sbjct: 503 AYAQKLVDALADADVRVEFDTRSEKLGYKMREAQIQKVPYLAVLGKNEEAEGTVSYRLHG 562 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + +E + + + Sbjct: 563 EHGTTTVKFDEFVELIVNEIKSK 585 >gi|332287873|ref|YP_004422774.1| threonyl-tRNA synthetase [Chlamydophila psittaci 6BC] gi|313848445|emb|CBY17449.1| threonyl-tRNA synthetase [Chlamydophila psittaci RD1] gi|325506736|gb|ADZ18374.1| threonyl-tRNA synthetase [Chlamydophila psittaci 6BC] gi|328915135|gb|AEB55968.1| threonyl-tRNA synthetase [Chlamydophila psittaci 6BC] Length = 635 Score = 226 bits (575), Expect = 7e-57, Method: Composition-based stats. Identities = 79/441 (17%), Positives = 143/441 (32%), Gaps = 43/441 (9%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E RD + KL L + + S G+ + P G D + + G Sbjct: 227 LHQLEEAKQRDHRVLGTKLDLFSQ--QECSAGMPFFHPRGMIIWDALIGYWKRLHQLAGY 284 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P L + LW SG + +Y + M L +D+ P + +++ + SY+ Sbjct: 285 KEIQTPQLMNRSLWEVSGHWSNYRENMYTLK-IDDEDYAIKPMNCPGCMLYYKTRLHSYK 343 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 P +I R E+ G+MR R F DA+ LTPE + + ++ Sbjct: 344 QFPLRIAEIGHVHRYEVSGALSGLMRVRAFHQDDAH-VFLTPEQVEEETLNILHLVSELY 402 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 GL+ + + P E S + + + + + Sbjct: 403 STFGLEY-HLELSTRP----------------EKATIGSDELWELATAALERALINSNTP 445 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I A Y D+H K R + G I + A Sbjct: 446 FIINPGDGAFYGPKIDIHV----------KDAIQRTWQCGTI-QLDMFLPERFELEYTNA 494 Query: 306 DGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 G+ M + R + +IE + + Sbjct: 495 QGEKSTPVMLHRALFGSIERFLGILIEHFKGRFPLWLSPEHIRLITVA-------DRHQP 547 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +K+ K+G V DD E + + A + V +G + + + + I+ R Sbjct: 548 RAQKLATAWQKLGLIVTVDDSNESVSKKIRNAQNMQVNYMVTLGDREIEQNTLAIRTRDN 607 Query: 424 GIREDMSLEEVINYASHRFSN 444 + DM+ ++ IN ++ Sbjct: 608 RVLNDMTEDKFINTILEEKNS 628 >gi|227889526|ref|ZP_04007331.1| threonyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200] gi|227850004|gb|EEJ60090.1| threonyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200] Length = 643 Score = 226 bits (575), Expect = 7e-57, Method: Composition-based stats. Identities = 76/434 (17%), Positives = 153/434 (35%), Gaps = 36/434 (8%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L L + + G+ W+P G V I +++ G + P L Sbjct: 238 RDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRVVERYIVDKEVADGYEHVYTPVL 295 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y +M D D M P + I++ HI+SYR LP Sbjct: 296 MNVDAYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIA 355 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + + K+ + ++ + Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIREE-FAKVLKLIMDVYKDFDITD 414 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + + + + + DD+ E Sbjct: 415 YYFRLS-------------YRDPKNTDKYYANDEMWERSQSMLKAAMDDLGLDYVEAEGE 461 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ T+ G DG++H Sbjct: 462 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----GLTYVGQDGEEHRP 510 Query: 313 -QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + +G M A + + G W + I +++ +K+ Sbjct: 511 VMIHRGIVGTMERFIAYLTEIYKGAFPTWLA-----PVQAEIIPVNEEAHGAYADKVREE 565 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+K G D E++G + + P +++G + ++ + V ++ T + SL Sbjct: 566 LAKRGFRAEVDHRNEKLGYKIRESQTQKVPYTLVLGDEEMNANGVNVRRYGTEEQISKSL 625 Query: 432 EEVINYASHRFSNN 445 +E IN + Sbjct: 626 DEFINEIDADVKSY 639 >gi|90961542|ref|YP_535458.1| prolyl-tRNA synthetase [Lactobacillus salivarius UCC118] gi|114152204|sp|Q1WUG0|SYP_LACS1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|90820736|gb|ABD99375.1| Prolyl-tRNA synthetase [Lactobacillus salivarius UCC118] Length = 571 Score = 226 bits (575), Expect = 7e-57, Method: Composition-based stats. Identities = 111/282 (39%), Positives = 163/282 (57%), Gaps = 1/282 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P L+E P DAE+ SH+LMLR G I Q + G+Y++LPL + + + IIREE Sbjct: 1 MKQSQMLIPTLKEIPSDAEVVSHQLMLRGGYIKQITAGMYAYLPLAYRVMKKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R A+EM VP + A+LW ESGRY++YG + +L DR+++ I GPTHEE T I R Sbjct: 61 MDRIDAVEMLVPAVVPAELWQESGRYETYGPTLFKLKDRHERDFILGPTHEETFTTIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ+K+RDE RPRFG++R REFLM D YSF + + +N + Sbjct: 121 AIKSYKKLPLYLYQIQMKYRDENRPRFGLLRGREFLMLDGYSFHVDDASMEKVFNDTDKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GL + A+SG +GG+ S EF +A+ GE + S D+ E Sbjct: 181 YQRIFERCGLDFRGIIADSGAMGGNRSKEFQAIAEVGEDTIAYSDS-SDYAANIEMAKNL 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 I + + A + ++ + L + + + + Sbjct: 240 RIPKQSHETPKDLEKVATPNAKTIVEVAEFLGTDTQNEIKTL 281 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 64/173 (36%), Positives = 98/173 (56%), Gaps = 1/173 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 E RGIE+GHIF GT+YS + A +G+ ++MG YGIG R+++A++E Sbjct: 396 GEGVLKFTRGIEIGHIFQLGTRYSESLGADVLDENGRQVPMRMGCYGIGVSRLLSAIVEQ 455 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 +D GI WP +APF I ++ + + R+ EK+ A L G V DD E+ G + Sbjct: 456 HNDENGIAWPREIAPFDIHVVPVNVKNDTQRELSEKVTAMLEDAGYQVLVDDRKERAGVK 515 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 FA +DL+G P+++ VG K + VEIK R G + ++ LEE++N F+ Sbjct: 516 FADSDLIGLPIRITVGKK-ADEGIVEIKLRQNGEKIEVKLEELLNSVKILFNE 567 >gi|56963999|ref|YP_175730.1| prolyl-tRNA synthetase [Bacillus clausii KSM-K16] gi|81822102|sp|Q5WFT6|SYP_BACSK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|56910242|dbj|BAD64769.1| proline-tRNA synthetase [Bacillus clausii KSM-K16] Length = 566 Score = 226 bits (575), Expect = 7e-57, Method: Composition-based stats. Identities = 119/271 (43%), Positives = 172/271 (63%), Gaps = 5/271 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S Y P +++ P DAE SH+LMLR GM+ Q + G+Y++LPL ++ + + AIIREE Sbjct: 1 MRQSTYLAPTMRDVPADAEAISHQLMLRAGMMRQIAAGVYAYLPLAKRTIAKIEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+++P+L A+LW SGR+++ G E++RL DR+++ GPTHEEV+T + + Sbjct: 61 LDAIGAQELTLPSLHPAELWQASGRWEAMGDELVRLKDRHNRDFALGPTHEEVITSLIKD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQ+Q KFRDE RPRFG++R REF+MKDAYSF +PE +Y +M + Sbjct: 121 GIASYKKLPLCVYQVQTKFRDERRPRFGLLRGREFIMKDAYSFHDSPESLDEAYWQMHGA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE--NTD 238 Y RIF R+GL+ P+ A+SG +GG +HEF+ LA GE V S D+ E Sbjct: 181 YSRIFTRVGLEFRPVIADSGAMGGKDTHEFMALASVGEDTVVYSD-GSDYAANLEMAKAA 239 Query: 239 FDDIISLNSI--VEQWTAPYAATSDVHNEKL 267 + S+ + +E+ P A T D E L Sbjct: 240 LPEAPSVQAHGLLEKRATPEAKTVDEAAEAL 270 Score = 163 bits (412), Expect = 6e-38, Method: Composition-based stats. Identities = 65/191 (34%), Positives = 104/191 (54%), Gaps = 3/191 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 A D+ + D P+ K GIE+G IF GT+YS + A + GK Sbjct: 377 VTAYKDLRTVREGDPSPDGKGTLRFAEGIEIGQIFKLGTRYSESLDAKYLDGQGKAQPFL 436 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R +AAVIE HD GI+WP +VAPF + L+ + ++ + E++Y+ + Sbjct: 437 MGCYGIGVSRTLAAVIEQHHDEAGIVWPKAVAPFDVHLLALNVKNEDQKTLAEQLYSDIR 496 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G DV +DD E+ G +F ADL+G P++V VG + + +E+K R TG + +++ E Sbjct: 497 QAGIDVLYDDRPERAGVKFKDADLIGLPVRVAVGKR-AGEGIIEVKVRKTGEQLELTASE 555 Query: 434 VINYASHRFSN 444 ++ + + Sbjct: 556 LVRWLNDFLRE 566 >gi|223039114|ref|ZP_03609404.1| threonyl-tRNA synthetase [Campylobacter rectus RM3267] gi|222879475|gb|EEF14566.1| threonyl-tRNA synthetase [Campylobacter rectus RM3267] Length = 606 Score = 226 bits (575), Expect = 7e-57, Method: Composition-based stats. Identities = 75/437 (17%), Positives = 153/437 (35%), Gaps = 40/437 (9%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 I + RD ++ L + G+ WLP G + + I+ + G + Sbjct: 205 IEEAKKRDHRKLGVEMKLFA-FDEEVGGGLPIWLPNGGRLRSKLEQILYKAHRDRGYEPV 263 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P L AD+W +SG Y +Y + M ++ P + +++S I+SYR+LP Sbjct: 264 RGPELLKADVWKKSGHYANYKENM-YFTTIDEAEYGIKPMNCVGHIKVYQSDIRSYRDLP 322 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 F++ + R E G+ R REF D++ F + P K + ++ +I Sbjct: 323 LKFFEYGVVHRHEKSGVLHGLFRVREFAQDDSHIFCM-PSQIKENILEILKFAGKIMENF 381 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 G T + + + + D+ I Sbjct: 382 GFHYEMEI------------------STKPAKAIGGDEIWETATKALKEALDENGFKYGI 423 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 E A Y D+ K+ D+L + ++ F ++ + A+ + Sbjct: 424 DEGGGAFYGPKIDI---KITDALKRKWQCGTIQVD----FNLPERFD----LGYIDANNE 472 Query: 309 DHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + +G+ ++ G+ + + + I D + Sbjct: 473 RRQPVMLHRALLGSFERFIGILIEHTGGELPFF------VAPTQVVIVPISDAHLDYAKT 526 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + L K+G D E + + A+ P+ ++G V++S + ++ R T ++ Sbjct: 527 VAKELRKIGVDSEIASKNESLNKRIRTAEKQRVPMIAVLGDNEVANSAIALRDRTTREQK 586 Query: 428 DMSLEEVINYASHRFSN 444 DM L+E + + + Sbjct: 587 DMKLDEFVGLLKSKLAE 603 >gi|317131189|ref|YP_004090503.1| threonyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3] gi|315469168|gb|ADU25772.1| threonyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3] Length = 645 Score = 226 bits (575), Expect = 7e-57, Method: Composition-based stats. Identities = 74/444 (16%), Positives = 158/444 (35%), Gaps = 37/444 (8%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + +L+E RD +L T + +G+ LP G + L + + +E+ + G Sbjct: 233 ITMLEEARKRDHNKLGRELGFFTT-VDYIGQGLPVMLPKGSRVLQLLQRFVEDEEEKRGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 + P L +DL+ SG +D Y M +++D+ P ++ + +S Sbjct: 292 LLTKTPLLAKSDLYKISGHWDHYRDGMFVLGDEEKDDEVFALRPMTCPFQFQVYLNKKRS 351 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + FR+E G++R R+F + + + P+ + + Sbjct: 352 YRDLPMRLGETSTLFRNEASGEMHGLIRVRQFTISEGHIACR-PDQLEEEFKGCVDLANF 410 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + +GL D+S+ F + + + + + DD+ Sbjct: 411 MLKTVGLDE------------DVSYRFSKWDENDRDKYIGTSEQWEEVQDRMRNILDDLG 458 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y D+ +F + + I+ F + + Sbjct: 459 IQYTEASGEAAFYGPKLDIQIRNVF---GKEDTLITVQID----FQL----AKRFEMKYT 507 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG++ Y + IG A++ + P +AP ++ ++ I + Sbjct: 508 DTDGQEKYPYVIHRTSIGCYERTLALLI---EKYAGAMPTWLAPEQVRVLPISEKHE--- 561 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + + +L G D E+IG + A L P ++ G + + V ++ R+ Sbjct: 562 AYAQPVLEKLRAAGLRATVDQRNEKIGYRIREAQLEKVPYMLVAGDREAEEGTVSVRARV 621 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 G +++ + + R Sbjct: 622 -GEGGTQTVDAFLKDILQEIAEKR 644 >gi|196008377|ref|XP_002114054.1| hypothetical protein TRIADDRAFT_58133 [Trichoplax adhaerens] gi|190583073|gb|EDV23144.1| hypothetical protein TRIADDRAFT_58133 [Trichoplax adhaerens] Length = 473 Score = 226 bits (575), Expect = 7e-57, Method: Composition-based stats. Identities = 139/456 (30%), Positives = 239/456 (52%), Gaps = 34/456 (7%) Query: 4 SKYFLPILQ--ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 S F+P+++ + A ++ ++ G++ Q G+Y LP+ +A+ + ++ EE Sbjct: 33 SSLFIPMMRTSDQSASASVSRKTILENAGLLKQSRPGLYYILPVALRAMYKLIKVVDEEM 92 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 R G ++ P L ADLW SGR+D+ G EM +L DR+++ GPTHEE ++++ ++ Sbjct: 93 TRIGGSKLGTPCLIPADLWQSSGRWDTLGAEMFKLKDRHNRHYCLGPTHEESISELVGTY 152 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + S +P YQI KFRDE+RPR G+ R+REF MKD YSFD+ E S +SY + +Y Sbjct: 153 LNSKNMMPLRLYQIDRKFRDEIRPRLGLRRAREFWMKDMYSFDIDKEASLNSYEIICEAY 212 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +RIF+RLGL + + A+SG +GGD SHEF ++AD GE ++ + E D Sbjct: 213 VRIFNRLGLNVVKVVADSGAMGGDTSHEFHLIADDGEDEILICDQCHK-AMNMETLKSGD 271 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 +++ ++ E RG+E+GH FY GTKYS S T Sbjct: 272 VMAECNLCEGKQ-------------------NKNIQKYRGVEIGHAFYLGTKYSKAASVT 312 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-- 359 + + YV+MGSYGIG R++ A +E I WP + P+ I ++ + + Sbjct: 313 YTDENNCKVYVEMGSYGIGVTRLLDAALEVQSTCNKIRWPSVITPYNICIVPLGSPKDNS 372 Query: 360 --VCRDACEKIYARLS--KVGCDVFWDDM-----GEQIGSQFAVADLLGFPLQVIVGSKF 410 +++Y +L+ K+ +V DD G++ A LLG+P +I+G + Sbjct: 373 SQQLLQLAQQLYDKLAVGKLQNEVVIDDRIYLSKTVGPGTRLRQATLLGYPYLIILGKQA 432 Query: 411 V-SDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 + +E++ +L G ++++ ++ ++++ + Sbjct: 433 LQKQGYIELEDQLNGSKQNIHIDNIVDHIQQVYEKR 468 >gi|163851744|ref|YP_001639787.1| threonyl-tRNA synthetase [Methylobacterium extorquens PA1] gi|163663349|gb|ABY30716.1| threonyl-tRNA synthetase [Methylobacterium extorquens PA1] Length = 675 Score = 226 bits (575), Expect = 7e-57, Method: Composition-based stats. Identities = 74/443 (16%), Positives = 142/443 (32%), Gaps = 40/443 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E R D ++ L + G+ W G + A +R + Sbjct: 232 YLHRLEEAERRDHRRLGKEMDLF--HFQEEGPGVVFWHAKGWTIFQELIAYMRRRL-KGD 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-----KAMIYGPTHEEVMTDIFRS 120 E++ P + LW SG + Y + M + + P + IF+ Sbjct: 289 YAEVNAPQILDKSLWETSGHWGWYRENMFAAQSAGEEAEDKRWFALKPMNCPGHVQIFKH 348 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + + R E G+MR R F DA+ F + + Sbjct: 349 GLKSYRDLPLRMAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEDQLAAECLKIN-D 407 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L + G I ++ + P S A+ TQV E Sbjct: 408 LILSTYADFGFDQILVKLSTRPEKRVGSDALWDHAEAVMTQVL---------AQIEEQSG 458 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 I + ++ A Y + L D++ + + ++ F ++ Sbjct: 459 GRIKT--AVNPGEGAFYGPKFEY---VLRDAIGRDWQCGTTQVD----FNLPERFD---- 505 Query: 300 ATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A++ K V + G+M ++ G +W V ++ Sbjct: 506 ASYIDADSQKKPPVMIHRAICGSMERFTGILIEHFAGHFPLWLAPVQVVVATIT------ 559 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 ++ L + G V D E+I + L P+ + +G + + V + Sbjct: 560 SDADPYAREVVRVLERAGLRVEADLRNEKINYKVREHSLAKVPVLLALGRREAEERTVSV 619 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + M+L+ + Sbjct: 620 RRMGSQKTTTMALDAALAAFIEE 642 >gi|322371434|ref|ZP_08045983.1| threonyl-tRNA synthetase [Haladaptatus paucihalophilus DX253] gi|320548966|gb|EFW90631.1| threonyl-tRNA synthetase [Haladaptatus paucihalophilus DX253] Length = 645 Score = 226 bits (575), Expect = 7e-57, Method: Composition-based stats. Identities = 69/445 (15%), Positives = 140/445 (31%), Gaps = 45/445 (10%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + + RD ++ L + + HS G ++ P G + +RE+ G Sbjct: 235 FLERREEAAKRDHRKIGREMDLFS--VPDHSPGCVNFHPNGMAIRRELEEYVREKNAELG 292 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P L +LW +SG YD + +E ++N P + I+ +S Sbjct: 293 YEEVKTPELNHTELWKKSGHYDHFKEEGEMFAWEQNGHEYGLKPMNCANHAHIYDDQRRS 352 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP F + + +R+E G++R R F D ++F + + Sbjct: 353 YRDLPLRFSEFGMCYRNEQSGELSGMLRVRGFTQDDGHAFVRPEGIREE-IARTLSVIDG 411 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ GL + ++ +T + + + +D Sbjct: 412 MYEAFGLDA------------------HLVLETKPDDAIGDDELWERAHEALRNALEDEG 453 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y ++ E D++ + ++ + ++ Sbjct: 454 LEYDVAEGEGAFYGPKIAINVE---DAIGREWTIGTVQLDFVQP--------ERLDISYV 502 Query: 304 GADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G D ++H M + R + IE + I + Sbjct: 503 GEDNEEHRPVMIHRALLGSMERFMGVFIEHVAGKFPFWLAPEQVRI----LPITDDESG- 557 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+I L V DD +G + P +IVGS + ++ R Sbjct: 558 --YAEEIADELGS--FRVEVDDRDWTLGKKIRAGHDDRVPYMIIVGSDEAESGTISVRDR 613 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + ++ + + R Sbjct: 614 EERQEGGVERDDFRRHLEAEYGEKR 638 >gi|257887080|ref|ZP_05666733.1| prolyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|257895645|ref|ZP_05675298.1| prolyl-tRNA synthetase [Enterococcus faecium Com12] gi|293377744|ref|ZP_06623933.1| proline--tRNA ligase [Enterococcus faecium PC4.1] gi|257823134|gb|EEV50066.1| prolyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|257832210|gb|EEV58631.1| prolyl-tRNA synthetase [Enterococcus faecium Com12] gi|292643744|gb|EFF61865.1| proline--tRNA ligase [Enterococcus faecium PC4.1] Length = 569 Score = 226 bits (575), Expect = 8e-57, Method: Composition-based stats. Identities = 114/273 (41%), Positives = 160/273 (58%), Gaps = 3/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK +P L+E P DAE+ SH+++LR G I Q S GIYS+LPL + L+ + I+REE Sbjct: 1 MRQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVSAGIYSYLPLANRVLEKLKRIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM +P + A+LW ESGRY++YG + R DRND+ MI GPTHEE TD+ R+ Sbjct: 61 FEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRNDRKMILGPTHEETFTDLMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPRFG++R REF+MKDAYSF T E +Y + Sbjct: 121 EINSYKKLPLNLYQIQPKYRDEKRPRFGLLRGREFIMKDAYSFHATEESLDETYKDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--D 238 Y +F R GL+ + + G +GG S EF+ +++ GE + C D+ E Sbjct: 181 YTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAISEIGEDTI-CYSTESDYAANLEMATSY 239 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + S + +E + F S+ Sbjct: 240 YVSKKSHETQLELEKVATPNVKSIDEVADFFSV 272 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 65/186 (34%), Positives = 105/186 (56%), Gaps = 3/186 (1%) Query: 260 SDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ + D P+N V RGIE+GHIF GT+YS M AT +G++ +V MG Y Sbjct: 382 EDLRFVQEGDPSPDNNGVLAFTRGIEIGHIFKIGTRYSESMGATVLDENGREKFVIMGCY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E D +GI WP +APF + ++ + D+ + ++ ++K G Sbjct: 442 GIGVSRLLSAIVEQHSDEQGINWPKGIAPFDLHIVQMNLKDEYQTNLTNELEEAMTKAGY 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V DD E+ G +FA +DL+G P+++ VG K V VE+K + TG ++ EE+ N Sbjct: 502 EVLVDDRNERAGVKFADSDLIGCPIRITVGKKAVE-GIVEVKIKKTGEMVEVRKEELANT 560 Query: 438 ASHRFS 443 + Sbjct: 561 LPILLN 566 >gi|254561516|ref|YP_003068611.1| threonine tRNA synthetase [Methylobacterium extorquens DM4] gi|254268794|emb|CAX24755.1| threonine tRNA synthetase [Methylobacterium extorquens DM4] Length = 675 Score = 226 bits (575), Expect = 8e-57, Method: Composition-based stats. Identities = 74/443 (16%), Positives = 142/443 (32%), Gaps = 40/443 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E R D ++ L + G+ W G + A +R + Sbjct: 232 YLHRLEEAERRDHRRLGKEMDLF--HFQEEGPGVVFWHAKGWTIFQELIAYMRRRL-KGD 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-----KAMIYGPTHEEVMTDIFRS 120 E++ P + LW SG + Y + M + + P + IF+ Sbjct: 289 YAEVNAPQILDKSLWETSGHWGWYRENMFAAQSAGEEAEDKRWFALKPMNCPGHVQIFKH 348 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + + R E G+MR R F DA+ F + + Sbjct: 349 GLKSYRDLPLRMAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEDQLAAECLKIN-D 407 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L + G I ++ + P S A+ TQV E Sbjct: 408 LILSTYADFGFDQILVKLSTRPEKRVGSDALWDHAEAVMTQVL---------AQIEEQSG 458 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 I + ++ A Y + L D++ + + ++ F ++ Sbjct: 459 GRIKT--AVNPGEGAFYGPKFEY---VLRDAIGRDWQCGTTQVD----FNLPERFD---- 505 Query: 300 ATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A++ K V + G+M ++ G +W V ++ Sbjct: 506 ASYIDADSQKKPPVMIHRAICGSMERFTGILIEHFAGHFPLWLAPVQVVVATIT------ 559 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 ++ L + G V D E+I + L P+ + +G + + V + Sbjct: 560 SDADPYAREVVRVLERAGLRVEADLRNEKINYKVREHSLAKVPVLLALGRREAEERTVSV 619 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + M+L+ + Sbjct: 620 RRMGSQKTTTMALDAALAAFIEE 642 >gi|29840712|ref|NP_829818.1| threonyl-tRNA synthetase [Chlamydophila caviae GPIC] gi|33301681|sp|Q821I3|SYT_CHLCV RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|29835062|gb|AAP05696.1| threonyl-tRNA synthetase [Chlamydophila caviae GPIC] Length = 635 Score = 226 bits (575), Expect = 8e-57, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 143/445 (32%), Gaps = 42/445 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++ + + RD + KL L + + S G+ + P G D + + Sbjct: 223 LKEHLHQLEEAKKRDHRVLGAKLDLFSQ--QECSAGMPFFHPRGMIVWDALIGYWQRLHQ 280 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G ++ P L + LW SG + +Y M L +++ P + +++ + Sbjct: 281 LAGYKQILTPQLMNRSLWETSGHWSNYKANMYTLK-IDEEDYAIKPMNCPGCMLYYKTRL 339 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY+ P +I R E+ G+MR R F DA+ LTPE + + Sbjct: 340 HSYKEFPLRIAEIGHVHRYEVSGALSGLMRVRAFHQDDAH-VFLTPEQVEEETLNILNLV 398 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ GL+ + + P E S + + + + Sbjct: 399 SELYSTFGLEYH-LELSTRP----------------EKDTIGSDELWELATSALERALIN 441 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + I A Y D+H K R + G I Sbjct: 442 SNTPFIINPGDGAFYGPKIDIHV----------KDAIQRTWQCGTI-QLDMFLPERFELE 490 Query: 302 FKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + A G+ M + R + +IE + Sbjct: 491 YTNAQGEKSTPIMLHRALFGSIERFLGILIEHFKGKFPLWLSPEHIRLITVA-------D 543 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + +++ A K+G V DD E + + A + V +G + + ++ + I+ Sbjct: 544 RHQPHAKELAAAWQKLGLVVTVDDSNESVSKKIRNAQNMQVNYMVTLGDREIEENTLAIR 603 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 R + M++E IN ++ Sbjct: 604 TRDNRVLNAMTVETFINTILEEKNS 628 >gi|240138908|ref|YP_002963383.1| threonine tRNA synthetase [Methylobacterium extorquens AM1] gi|240008880|gb|ACS40106.1| threonine tRNA synthetase [Methylobacterium extorquens AM1] Length = 675 Score = 226 bits (575), Expect = 8e-57, Method: Composition-based stats. Identities = 74/443 (16%), Positives = 142/443 (32%), Gaps = 40/443 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E R D ++ L + G+ W G + A +R + Sbjct: 232 YLHRLEEAERRDHRRLGKEMDLF--HFQEEGPGVVFWHAKGWTIFQELIAYMRRRL-KGD 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-----KAMIYGPTHEEVMTDIFRS 120 E++ P + LW SG + Y + M + + P + IF+ Sbjct: 289 YAEVNAPQILDKSLWETSGHWGWYRENMFAAQSAGEEAEDKRWFALKPMNCPGHVQIFKH 348 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + + R E G+MR R F DA+ F + + Sbjct: 349 GLKSYRDLPLRMAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEDQLAAECLKIN-D 407 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L + G I ++ + P S A+ TQV E Sbjct: 408 LILSTYADFGFDQILVKLSTRPEKRVGSDALWDHAEAVMTQVL---------AQIEEQSG 458 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 I + ++ A Y + L D++ + + ++ F ++ Sbjct: 459 GRIKT--AVNPGEGAFYGPKFEY---VLRDAIGRDWQCGTTQVD----FNLPERFD---- 505 Query: 300 ATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A++ K V + G+M ++ G +W V ++ Sbjct: 506 ASYIDADSQKKPPVMIHRAICGSMERFTGILIEHFAGHFPLWLAPVQVVVATIT------ 559 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 ++ L + G V D E+I + L P+ + +G + + V + Sbjct: 560 SDADPYAREVVRVLERAGLRVEADLRNEKINYKVREHSLAKVPVLLALGRREAEERTVSV 619 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + M+L+ + Sbjct: 620 RRMGSQKTTTMTLDAALAAFIEE 642 >gi|110633361|ref|YP_673569.1| threonyl-tRNA synthetase [Mesorhizobium sp. BNC1] gi|123058100|sp|Q11JM1|SYT_MESSB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|110284345|gb|ABG62404.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Chelativorans sp. BNC1] Length = 656 Score = 226 bits (575), Expect = 8e-57, Method: Composition-based stats. Identities = 74/443 (16%), Positives = 145/443 (32%), Gaps = 40/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD ++ L + G+ W G + N+ + +R + Sbjct: 235 YLQMLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHAKGWRMFQNLVSYMRRRLDGV- 291 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-----MIYGPTHEEVMTDIFRS 120 E++ P + LW SG + Y + M ++ +++A P + IF+ Sbjct: 292 YQEVNAPQVLDHSLWQTSGHWGWYKENMFKVECADEEAEDKRTFALKPMNCPGHVQIFKH 351 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R E G+MR R F DA+ F + ++ Sbjct: 352 GLKSYRDLPIRLAEFGAVHRYEPSGALHGLMRVRGFTQDDAHIFCTEDQLAEECLKIN-D 410 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L + G + I + + P S A+ E + + T Sbjct: 411 LILSTYADFGFEEIQVFFSTRPEKRVGSDALWDHAE--EIMGGVLEQIAERSGGRIKTAI 468 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + A Y D L D++ + ++ FG Sbjct: 469 N---------PGDGAFYGPKFDY---VLKDAIGRQWQCGTTQVDFNLPERFG-------- 508 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + D + + G+M ++ ++ G +W + ++ Sbjct: 509 AFYIDKDSEKKQPVMIHRAICGSMERFLGILIENYAGHFPLWFAPLQVVVATIT------ 562 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D ++ +L G D E+I + L P+ ++ G + + V I Sbjct: 563 SDADDYARQVTQQLKAAGLTAEADLRNEKINYKVREHSLAKVPVILVCGKREAEEGSVNI 622 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + + + L E I Sbjct: 623 RRLGSRDQASLLLAEAIAQLIDE 645 >gi|62422036|gb|AAX82600.1| putative threonyl-tRNA synthetase [Lactobacillus reuteri] Length = 601 Score = 226 bits (575), Expect = 8e-57, Method: Composition-based stats. Identities = 71/441 (16%), Positives = 151/441 (34%), Gaps = 36/441 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + RD + ++L L + + G+ WLP G + I + + G Sbjct: 189 KRQEAKERDHRVIGNQLDLF--FVDPKVGAGLPYWLPKGATIRRTIERYIIDREVADGHQ 246 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYR 126 + P L + D + SG + Y +M D D M P + +++ HI+SYR Sbjct: 247 HVYTPVLMNLDAYKTSGHWAHYRDDMFPPMDMGDGEMLESRPMNCPSHIQVYKHHIRSYR 306 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP ++ + R E G+ R RE + D ++F + + K+ + ++ Sbjct: 307 DLPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVTLDQIRSE-FAKILKLIMSVY 365 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + R + + + + + + DD+ Sbjct: 366 EDFDITDYSFRLSLRD-------------PKNVKKYYANDEMWEKSQSMLKSAMDDLNLD 412 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 E A Y D+ + +L ++ +S ++ F ++ ++ G Sbjct: 413 YYEAEGEAAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----GLSYVGQ 461 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DGK+H + +G M A + + G W I +++ + Sbjct: 462 DGKEHQPVMIHRGVVGTMERFMAYLTEIYKGAFPTWLAPEQVH-----IIPVNEEAHGEY 516 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + ++ V E++G + A P ++VG + + V + Sbjct: 517 ADNLAKKMKAANIRVNVAHRNEKMGYKIREAQTQKVPYTLVVGDDEKNSNGVSVSKYGEK 576 Query: 425 IREDMSLEEVINYASHRFSNN 445 + +MS E +N ++ Sbjct: 577 EQNEMSQEAFMNEILEDIASY 597 >gi|313619139|gb|EFR90927.1| prolyl-tRNA synthetase [Listeria innocua FSL S4-378] Length = 409 Score = 226 bits (575), Expect = 8e-57, Method: Composition-based stats. Identities = 120/271 (44%), Positives = 164/271 (60%), Gaps = 1/271 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + AI+REE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQVASGIYSYLPLAILTLRKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA EM +P LQ A+LW ESGR+ YG E++RL DR + + GPTHEE++T + R Sbjct: 61 LEAIGAAEMLMPALQPAELWHESGRWADYGPELMRLKDRAARDFVLGPTHEELITSLLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E ++ M + Sbjct: 121 EIKSYKRLPITLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDETFELMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D+ +E Sbjct: 181 YSNIFSRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYSD-ASDYAANTEMAPVL 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + + +E+ A + + + L Sbjct: 240 YMEKKSHELEKELEKVATENQKTIADIVEFL 270 >gi|227551759|ref|ZP_03981808.1| proline--tRNA ligase [Enterococcus faecium TX1330] gi|227179064|gb|EEI60036.1| proline--tRNA ligase [Enterococcus faecium TX1330] Length = 569 Score = 226 bits (575), Expect = 8e-57, Method: Composition-based stats. Identities = 114/273 (41%), Positives = 160/273 (58%), Gaps = 3/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK +P L+E P DAE+ SH+++LR G I Q S GIYS+LPL + L+ + I+REE Sbjct: 1 MRQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVSAGIYSYLPLANRVLEKLKRIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM +P + A+LW ESGRY++YG + R DRND+ MI GPTHEE TD+ R+ Sbjct: 61 FEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRNDRKMILGPTHEETFTDLMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPRFG++R REF+MKDAYSF T E +Y + Sbjct: 121 EINSYKKLPLNLYQIQPKYRDEKRPRFGLLRGREFIMKDAYSFHATEESLDETYKDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--D 238 Y +F R GL+ + + G +GG S EF+ +++ GE + C D+ E Sbjct: 181 YTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAISEIGEDTI-CYSTESDYAANLEMATSY 239 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + S + +E + F S+ Sbjct: 240 YVSKKSHETQLELEKVATPNVKSIDEVADFFSV 272 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 65/186 (34%), Positives = 105/186 (56%), Gaps = 3/186 (1%) Query: 260 SDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ + D P+N V RGIE+GHIF GT+YS M AT +G++ +V MG Y Sbjct: 382 EDLRFVQEGDPSPDNNGVLAFTRGIEIGHIFKIGTRYSESMGATVLDENGREKFVIMGCY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E D +GI WP +APF + ++ + D+ + ++ ++K G Sbjct: 442 GIGVSRLLSAIVEQHSDEQGINWPKGIAPFDLHIVQMNLKDEYQTNLTNELEEAMTKAGY 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V DD E+ G +FA +DL+G P+++ VG K V VE+K + TG ++ EE+ N Sbjct: 502 EVLVDDRNERAGVKFADSDLIGCPIRITVGKKAVE-GIVEVKIKKTGEMVEVRKEELANT 560 Query: 438 ASHRFS 443 + Sbjct: 561 LPILLN 566 >gi|111224550|ref|YP_715344.1| threonyl-tRNA synthetase [Frankia alni ACN14a] gi|111152082|emb|CAJ63808.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) [Frankia alni ACN14a] Length = 692 Score = 226 bits (575), Expect = 8e-57, Method: Composition-based stats. Identities = 68/447 (15%), Positives = 138/447 (30%), Gaps = 37/447 (8%) Query: 5 KYFLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L + RD +L L + + G+ + P G + R Sbjct: 280 KAYQTRLAEAEKRDHRRLGAELDLFS-FPTEIGPGLAVFHPKGGAIRTAMEDYARRRHIE 338 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHI 122 G ++ P + +DL+ SG D + M + P + + I+RS Sbjct: 339 AGYSFVNTPHITKSDLYEISGHLDWFADGMYPPMELDGGTDYYLKPMNCPMHILIYRSRG 398 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR LP ++ +R E G+ R R DA+ F + + + Sbjct: 399 RSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDAHLFCAREQLPAEL-DSVLNFV 457 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L + GL + + P E + + + Sbjct: 458 LGLLRDYGLSDFYLELSTKP----------------EGKAVGTDAEWEEATELLRAAAQK 501 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y + + D++ ++S ++ F ++ L A Sbjct: 502 QDLELVLDAGGGAFYGPKI---SVQARDAIGRTWQLSTIQVD----FQLPQRFDLEYQAA 554 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + + G + A++ + P +AP + I I Sbjct: 555 ---DGTRQRPFMIHRALFGTIERFLAILL---EHYAGALPPWLAPVQAIGIPIT---DEH 605 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + A+LS G V D +++ + A P ++ G + V+ V + R Sbjct: 606 VPYLDGVAAKLSAHGVRVEVDSSDDRMQKKIRTAQKQKVPFMLLAGDEDVAKGAVSFRFR 665 Query: 422 LTGIREDMSLEEVINYASHRFSNNRPV 448 R + +++ + + V Sbjct: 666 DGTQRNGVPVDDAVAEILDAVTRRLQV 692 >gi|123965897|ref|YP_001010978.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515] gi|166225479|sp|A2BVR0|SYT_PROM5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123200263|gb|ABM71871.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515] Length = 638 Score = 226 bits (575), Expect = 8e-57, Method: Composition-based stats. Identities = 78/445 (17%), Positives = 143/445 (32%), Gaps = 40/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 + Y I + RD K L I + S G+ W P G + IRE Sbjct: 228 LTNYLKRIEEAEKRDHRKLGKKHSLF--HIQEESPGMIFWHPNGWIIYQILEKYIREILR 285 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + +E+ P LW +SG ++ + +M ++ P + +F + Sbjct: 286 KNEYLEIKTPQAVDKSLWEKSGHWEKFRDDMFT-TASENRTYAIKPMNCPCHIQVFNQGL 344 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSY++LP + R+E G+MR R F DA+ F T E + + Sbjct: 345 KSYKDLPLRLAEFGSCHRNEPSGALHGLMRVRNFTQDDAHIFC-TEEQIQEEVSTFIDLV 403 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +++ G I ++ + P S + ++ T+ +K+ P E Sbjct: 404 FEVYNTFGFDEIIIKLSTRPEKRVGSEDIWDKSEEALTEALNNKNLKWELQPGE------ 457 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 A Y + L D L + ++ AT Sbjct: 458 -----------GAFYGPKIEF---SLKDCLNRIWQCGTIQVDFSMPVRLD--------AT 495 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 F + + + +G+ ++ ++ K IW +S+ + Sbjct: 496 FVDINNEKKSPVMLHRAILGSFERFIGILIEQYEAKFPIWLAPTQIILLSIT------ER 549 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 C + L+ G D E+IG + + L PL IVG K + V ++ Sbjct: 550 NIKKCIEFNNLLNTKGYRSKIDIRNEKIGYKIRESTLARIPLIGIVGDKEQELNSVTLRA 609 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 L+ + + Sbjct: 610 LDGSNLGIYELDNLFKLMNTLIEKK 634 >gi|323337178|gb|EGA78432.1| Ths1p [Saccharomyces cerevisiae Vin13] Length = 734 Score = 225 bits (574), Expect = 8e-57, Method: Composition-based stats. Identities = 75/440 (17%), Positives = 156/440 (35%), Gaps = 40/440 (9%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + + RD + L + ++ S G WLP G + + + ++R E + G E+ Sbjct: 324 EASMRDHRKIGKEQELF--LFNEMSPGSCFWLPHGTRIYNTLVDLLRTEYRKRGYEEVIT 381 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + ++ LW SG + +Y + M + P + +F+S +SYR LP+ Sbjct: 382 PNMYNSKLWETSGHWANYKENMFTFEVEKET-FGLKPMNCPGHCLMFKSRERSYRELPWR 440 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + R+E G+ R R F DA+ F + Sbjct: 441 VADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCT-----HDQIESEIENIFNFLQ---- 491 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 I G EF + T + + D + I Sbjct: 492 ----------YIYGVFGFEFKMELSTRPEKYVGKIETWDAAESKLESALKKWGGNWEINA 541 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D+ + D+L + + ++ F ++ L + + ++ + Sbjct: 542 GDGAFYGPKIDIM---ISDALRRWHQCATIQLD----FQLPNRFELEFKSKDQDSESYER 594 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V + +G++ + A++ + WP ++P ++ ++ + Q E + Sbjct: 595 PVMIHRAILGSVERMTAILT---EHFAGKWPFWLSPRQVLVVPVGVKYQG---YAEDVRN 648 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE--- 427 +L G D G + + +L + IVG + +++ V I++R ++ Sbjct: 649 KLHDAGFYADVDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMNEKSVNIRNRDVMEQQGKN 708 Query: 428 -DMSLEEVINYASHRFSNNR 446 +S+EEV+ + R Sbjct: 709 ATVSVEEVLKQLRNLKDEKR 728 >gi|296110556|ref|YP_003620937.1| threonyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154] gi|295832087|gb|ADG39968.1| threonyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154] Length = 654 Score = 225 bits (574), Expect = 8e-57, Method: Composition-based stats. Identities = 74/441 (16%), Positives = 145/441 (32%), Gaps = 35/441 (7%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + RD L L + G+ WLP G V I +++ G Sbjct: 238 RREEAKERDHRTIGRDLDLF-FTSQEVGSGLPVWLPNGATIRRQVERYITDKELANGYQH 296 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRN 127 + P L + +L+ SG +D Y ++M D D P + +F+ +SYR Sbjct: 297 VYTPVLSNLNLYKTSGHWDHYREDMFPPMDMGDGEFLELRPMNCPSHIMVFKHKPRSYRE 356 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 LP ++ + R E + + + + PE + + + + ++ Sbjct: 357 LPIRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVEPEKLEEEFKSILTMMMEVYRD 416 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS-ENTDFDDIISLN 246 + R D T+ + D M + DD+ Sbjct: 417 FNITDYRFRLS--------------YRDPKNTEKYFDDDEMWEKSQAQLKRAMDDLKLDY 462 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y DV + +L + +S ++ F ++ + T+ GAD Sbjct: 463 YEAEGEAAFYGPKLDVQTKT---ALGGEETMSTIQLD----FLLPERF----NLTYIGAD 511 Query: 307 GKDHYV--QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 G+D++ + +G M A + + G W + + I + D Sbjct: 512 GQDNHRPVMLHRGIVGTMERFTAYLIEMYKGAFPTWLS-----PLQVQIIPVNLAAHGDY 566 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + L G V + ++G A P +++G V++ V I+ Sbjct: 567 ANAVQKELQAAGLRVNVEKKEAKMGYLIREAQTNKVPYTLVLGDSEVNEQTVTIRKYGEE 626 Query: 425 IREDMSLEEVINYASHRFSNN 445 + ++L + N+ +N Sbjct: 627 KTQTVALADFKNHILADVANY 647 >gi|157413014|ref|YP_001483880.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215] gi|166987324|sp|A8G3W3|SYT_PROM2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157387589|gb|ABV50294.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215] Length = 638 Score = 225 bits (574), Expect = 9e-57, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 134/442 (30%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD K L I + S G+ W P G + IRE + Sbjct: 231 YLKRIEEAEKRDHRKLGKKHSLF--HIQEESPGMIFWHPNGWTIYQVLEKYIREILKKND 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P LW +SG ++ + +M ++ P + +F +KSY Sbjct: 289 YLEIKTPQAVDKSLWEKSGHWEKFRDDMFT-TASENRTYAIKPMNCPCHIQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 ++LP + R+E G+MR R F DA+ F T E + + + Sbjct: 348 KDLPIRLAEFGSCHRNEPSGALHGLMRVRNFTQDDAHIFC-TEEQIQEEVSTFIDLVFEV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ + P S E D + D+ Sbjct: 407 YKTFGFDEIIIKLSTRPKKKVGSEE-----------------IWDKSEEALTKALDNKNL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ AT+ Sbjct: 450 KWELQPGEGAFYGPKIEF---SLKDCLNRVWQCGTIQVDFSMPIRLD--------ATYVD 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + + +G+ ++ ++ K IW +S+ + Sbjct: 499 IDNEKRNPVMLHRAILGSFERFIGILIEQYEAKFPIWLAPYQLTLLSIT------DRNIE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C K L G D E+IG + A L PL ++G K V ++ Sbjct: 553 KCLKFNELLINNGYRSTVDIRNEKIGYKIREATLERVPLIAVIGDKEEEIDSVSLRALDG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 +L + Sbjct: 613 RNLGIFNLPNLCKLMDGLIEKR 634 >gi|167740276|ref|ZP_02413050.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 14] Length = 568 Score = 225 bits (574), Expect = 9e-57, Method: Composition-based stats. Identities = 127/225 (56%), Positives = 162/225 (72%), Gaps = 1/225 (0%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 ++E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE NR GAIE+ Sbjct: 1 MKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREEMNRAGAIELL 60 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ IKSYR +P Sbjct: 61 MPAVQPAELWQESGRWEQYGPELLRFKDRKQNEFVIGPTHEEVVTDIARNQIKSYRQMPV 120 Query: 131 TFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD E K SY KM+ +Y+RIF R+GL Sbjct: 121 NFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDHESLKESYKKMYDAYVRIFTRIGL 180 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 + P+ A++G IGG SHEF V+ADTGE + DF E Sbjct: 181 EFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPT-SDFAANVE 224 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 69/179 (38%), Positives = 100/179 (55%), Gaps = 3/179 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 372 PEPVVADIRNVKAGDPSPDGKGALDICRGIEVGHVFQLGTKYSDAMGATFIDESGKAQPM 431 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE + D KGI+W +++APF++ L + R+A +K+YA Sbjct: 432 VMGCYGIGITRILGAAIEQNFDDKGIVWAEAIAPFEVVLCPMGYDRSDAVREAADKLYAD 491 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R + Sbjct: 492 LAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGRRDAEATLLP 550 >gi|324505892|gb|ADY42525.1| Threonyl-tRNA synthetase [Ascaris suum] Length = 706 Score = 225 bits (574), Expect = 9e-57, Method: Composition-based stats. Identities = 68/432 (15%), Positives = 145/432 (33%), Gaps = 40/432 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD L H S G W P G + + +R + + G E+ Sbjct: 296 EEAAKRDHRKIGRDQELF--FFHPLSPGAAFWYPKGAHIYNTLCNFMRNQYRKRGFTEVI 353 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + ++ LW +SG + Y M ++ + P + ++ +++ LP Sbjct: 354 SPNMFNSKLWEQSGHWQHYSDGMFKIEVEKEL-FGLKPMNCPGHCLMYSHMPRTHNELPM 412 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + + R+EL G+ R R F DA+ F + + ++ + Sbjct: 413 RYADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRPDQINSE-IKGCIDFINYVYVDVF 471 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + + P E D D+ + Sbjct: 472 GFTFKLNLSTRP----------------EEGFLGDIATWDHAEAELKKALDESGHPWELN 515 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y DV + D+L + + ++ F ++ L A F + + Sbjct: 516 PGDGAFYGPKIDV---TIQDALKRYHQCATIQLD----FQLPQRFDL---AYFDENNERK 565 Query: 310 HYVQMGSYGIGAMRVVAAVIESSH-DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 V + +G++ + A++ + A + R +++ Sbjct: 566 RPVMVHRALLGSIERMTAILTENFGGKWPFWLSPRQAKVITV-------HESQRVYAKEV 618 Query: 369 YARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +L + G +V +D+M + + Q A L F ++VG K + V ++ R +R Sbjct: 619 QKKLYEAGFEVEFDEMCSDTLNKQIRNAQLAQFNFILVVGPKEAQNGTVNVRTRDNAVRG 678 Query: 428 DMSLEEVINYAS 439 ++ L+++I + Sbjct: 679 EVKLDDLIEKFT 690 >gi|119716597|ref|YP_923562.1| threonyl-tRNA synthetase [Nocardioides sp. JS614] gi|166225470|sp|A1SJ90|SYT_NOCSJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|119537258|gb|ABL81875.1| Ser-tRNA(Thr) hydrolase [Nocardioides sp. JS614] Length = 668 Score = 225 bits (574), Expect = 9e-57, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 141/444 (31%), Gaps = 32/444 (7%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 I + RD L L + + G+ + P G + +R+ G Sbjct: 255 LHRIEEAERRDHRKLGRDLDLFS-FPDEIGSGLPVFHPKGGVIKRVMEDYVRQRHVEEGF 313 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P + L+ SG YG+ M D + + + IFRS +SYR Sbjct: 314 EYVGTPHIAKEGLFYTSGHLPYYGEAMFPPLDVDGMDYRLKAMNCPMHNLIFRSRQRSYR 373 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP ++ +R E G+ R R F D++S+ + + L +F Sbjct: 374 ELPLRLFEFGHVYRHEKSGVIHGLTRVRGFAQDDSHSYVTKEQAPAE-IKHLLDFCLGLF 432 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 GL + + D+ + S + Sbjct: 433 RDFGLDDFYLELSTRD-------------DSKPDKFIGSDEDWAVATKVLEDVCIASGLE 479 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 A Y + + D++ ++S + F + + A Sbjct: 480 LVPDPGGAAYYGPKV---SVQARDAIGRTWQMSTIQYD------FNQPSADRFDLHYTAA 530 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG + S G++ V+ + +P +AP ++ I I + D Sbjct: 531 DGSRQQPVMIHSAKFGSIERFIGVLV---EHYAGAFPPWLAPVQVQAIPIA---ERHNDY 584 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + R+ G V DD +++ + A LL P +I G V+ V ++R Sbjct: 585 LYDVAKRMQAQGLRVEVDDSDDRMQKKIRNAQLLKVPFMMIAGDDDVAAGAVSFRYRDGR 644 Query: 425 IREDMSLEEVINYASHRFSNNRPV 448 + L+E I + ++ V Sbjct: 645 QDNGVPLDEAIRRVADAVASREQV 668 >gi|255323684|ref|ZP_05364814.1| threonyl-tRNA synthetase [Campylobacter showae RM3277] gi|255299398|gb|EET78685.1| threonyl-tRNA synthetase [Campylobacter showae RM3277] Length = 606 Score = 225 bits (574), Expect = 9e-57, Method: Composition-based stats. Identities = 76/437 (17%), Positives = 154/437 (35%), Gaps = 40/437 (9%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 I + RD ++ L T + G+ WLP G + + I+ + G + Sbjct: 205 IEEAKKRDHRKLGVEMKLFT-FDDEVGGGLPIWLPNGGRLRSKLEQILYKAHRDRGYEPV 263 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P L AD+W +SG Y +Y + M ++ P + +++S I+SYR+LP Sbjct: 264 RGPELLKADVWKKSGHYANYKENM-YFTTIDEAEYGIKPMNCVGHIKVYQSDIRSYRDLP 322 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 F++ + R E G+ R REF D++ F + P K + ++ +I Sbjct: 323 LKFFEYGVVHRHEKSGVLHGLFRVREFAQDDSHIFCM-PSQIKENILEILKFAGKIMENF 381 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 G T + + + + D+ I Sbjct: 382 GFHYEMEI------------------STKPAKAIGGDEIWETATKALKEALDENGFKYGI 423 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 E A Y D+ K+ D+L + ++ F ++ + A+ + Sbjct: 424 DEGGGAFYGPKIDI---KITDALKRKWQCGTIQVD----FNLPERFD----LGYIDANNE 472 Query: 309 DHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + +G+ ++ G+ + + + I D + Sbjct: 473 RQQPVMLHRALLGSFERFIGILIEHTGGELPFF------VAPTQVVIVPISDAHLDYAKT 526 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + L K+G D E + + A+ P+ ++G V++S + ++ R T ++ Sbjct: 527 VAKELRKIGVDSEIASKNESLNKRIRTAEKQRVPMIAVLGDNEVANSAIALRDRTTREQK 586 Query: 428 DMSLEEVINYASHRFSN 444 DM L+E + + + Sbjct: 587 DMKLDEFVGLLKSKLAE 603 >gi|110799310|ref|YP_697117.1| prolyl-tRNA synthetase [Clostridium perfringens ATCC 13124] gi|168211250|ref|ZP_02636875.1| prolyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] gi|123049576|sp|Q0TMM3|SYP_CLOP1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|110673957|gb|ABG82944.1| prolyl-tRNA synthetase [Clostridium perfringens ATCC 13124] gi|170710790|gb|EDT22972.1| prolyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] Length = 570 Score = 225 bits (574), Expect = 9e-57, Method: Composition-based stats. Identities = 129/293 (44%), Positives = 169/293 (57%), Gaps = 6/293 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+E P +AEI SHKLMLR G++ + + GIY+++PLG K ++NV I+REE Sbjct: 1 MKMSNMLVGTLREVPAEAEIESHKLMLRAGLMRKMAAGIYNYMPLGLKVIENVKNIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E L A+LW ESGR+D+YG EM RL DR+++ GPTHEEV TDI R+ Sbjct: 61 MNNAGAQEFLASALIPAELWQESGRWDAYGAEMFRLKDRHNRDFCLGPTHEEVFTDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFGVMRSREF+MKD YSFD EG +Y KM + Sbjct: 121 EIKSYKQLPLNLYQIQTKYRDERRPRFGVMRSREFIMKDGYSFDKDQEGLDLAYEKMRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ IF+R GL + + A+SG IGG S EF+V ++ GE V D+ E Sbjct: 181 YVNIFNRCGLDAKAVAADSGAIGGSGSAEFMVKSEVGEDDVVFCTAC-DYAANIEKAP-- 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 S E+ + K + L + S + I IF K Sbjct: 238 ---STPEHAEKEELMEVEKVETPAVKSIEDLAKFFECSPKKIAKTLIFQADDK 287 Score = 166 bits (421), Expect = 6e-39, Method: Composition-based stats. Identities = 75/191 (39%), Positives = 103/191 (53%), Gaps = 3/191 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 D N + + PE + +RG EVGHIF GTKYS M ATF DGK Sbjct: 375 FEGIVGDFRNVTIGEKCPECGKEITISRGTEVGHIFKLGTKYSESMGATFIDEDGKAKPF 434 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R VA++IE +D GIIWP VAP+ +S+I ++ E+IY L Sbjct: 435 IMGCYGIGVTRTVASIIEQHNDENGIIWPLEVAPYHVSVIPANVKNEEQATKAEEIYNEL 494 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 K+G + DD E+ G +F ++L+G P+++ VG K + + +VE K R G E +S+E Sbjct: 495 RKMGVEALLDDRKERAGVKFKDSELMGIPMRITVG-KMIGEGQVEFKLRNGGEVETLSIE 553 Query: 433 EVINYASHRFS 443 EV N F Sbjct: 554 EVYNRVREEFE 564 >gi|269123109|ref|YP_003305686.1| prolyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112] gi|268314435|gb|ACZ00809.1| prolyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112] Length = 574 Score = 225 bits (574), Expect = 9e-57, Method: Composition-based stats. Identities = 122/237 (51%), Positives = 161/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK F+ +E P++AE SH+LMLR MI Q ++G+Y++LPLG K L + I+REE Sbjct: 1 MRFSKSFIKTYKEVPKEAETISHQLMLRASMIKQLTRGVYTYLPLGLKVLKKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ A E+ +P LQ ADLW ESGR+ SYG E++RL DRN++ + GPTHEEV+ D+FR+ Sbjct: 61 LNKINAQEILMPVLQPADLWQESGRWFSYGAELMRLHDRNNRDFVLGPTHEEVIVDLFRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP YQIQ KFRDE RPRFG+MR REF+MKDAYSF LT E YNK+ + Sbjct: 121 IVTSYKDLPLNVYQIQTKFRDERRPRFGLMRGREFIMKDAYSFHLTQECLDREYNKVKEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y +IF R GL + A++G IGG SHEF+VLA +GE + S D+ E Sbjct: 181 YCKIFERCGLNFRAVDADTGSIGGSESHEFMVLASSGEDDILYSDK-SDYAANVEKA 236 Score = 152 bits (385), Expect = 8e-35, Method: Composition-based stats. Identities = 79/205 (38%), Positives = 107/205 (52%), Gaps = 3/205 (1%) Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFD-SLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + Y D+ + D +L ARGIEVGHIF G KYS M+ Sbjct: 372 GHHYINMNLSDIHYDLVGDIRKAQKGDKALDGGTLDIARGIEVGHIFKLGKKYSAAMNTK 431 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G V MG YGIG RV AA IE + D GIIWP S+AP+ + LI + D++ Sbjct: 432 VLNDKGVAETVIMGCYGIGVSRVAAAAIEQNFDDFGIIWPKSIAPYLVDLILVNVKDEIA 491 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 ++ EKIY+ + DV +DD E+ G +F ADL+G PL+VIVG K + VEIKHR Sbjct: 492 KEVSEKIYSDMLLNNIDVIYDDRDEKAGFKFKDADLIGIPLKVIVG-KGAVNGMVEIKHR 550 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 ++ +E+VI+Y F N+ Sbjct: 551 DGSFSGEIKVEDVISYIK-EFEKNK 574 >gi|110801651|ref|YP_699687.1| prolyl-tRNA synthetase [Clostridium perfringens SM101] gi|123341520|sp|Q0SQC0|SYP_CLOPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|110682152|gb|ABG85522.1| prolyl-tRNA synthetase [Clostridium perfringens SM101] Length = 570 Score = 225 bits (574), Expect = 9e-57, Method: Composition-based stats. Identities = 129/293 (44%), Positives = 169/293 (57%), Gaps = 6/293 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+E P +AEI SHKLMLR G++ + + GIY+++PLG K ++NV I+REE Sbjct: 1 MKMSNMLVGTLREVPAEAEIESHKLMLRAGLMRKMAAGIYNYMPLGLKVIENVKNIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E L A+LW ESGR+D+YG EM RL DR+++ GPTHEEV TDI R+ Sbjct: 61 MNNAGAQEFLASALIPAELWQESGRWDAYGAEMFRLKDRHNRDFCLGPTHEEVFTDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFGVMRSREF+MKD YSFD EG +Y KM + Sbjct: 121 EIKSYKQLPLNLYQIQTKYRDERRPRFGVMRSREFIMKDGYSFDKDQEGLDLAYEKMRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ IF+R GL + + A+SG IGG S EF+V ++ GE V D+ E Sbjct: 181 YVNIFNRCGLDAKAVAADSGAIGGSGSAEFMVKSEVGEDDVVFCTAC-DYAANIEKAP-- 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 S E+ + K + L + S + I IF K Sbjct: 238 ---STPEHAEKEELMEVEKVETPAVKSIEDLAKFFECSPKKIAKTLIFQADDK 287 Score = 166 bits (419), Expect = 8e-39, Method: Composition-based stats. Identities = 75/191 (39%), Positives = 103/191 (53%), Gaps = 3/191 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 D N + + PE + +RG EVGHIF GTKYS M ATF DGK Sbjct: 375 FEGIVGDFRNVTIGEKCPECGKEITISRGTEVGHIFKLGTKYSESMGATFIDEDGKAKPF 434 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R VA++IE +D GIIWP VAP+ +S+I ++ E+IY L Sbjct: 435 IMGCYGIGVTRTVASIIEQHNDENGIIWPLEVAPYHVSVIPANVKNEEQATKAEEIYNEL 494 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 K+G + DD E+ G +F ++L+G P+++ VG K + + +VE K R G E +S+E Sbjct: 495 RKMGVEALLDDRKERAGVKFKDSELMGIPMRITVG-KMIGEGQVEFKLRNGGEVETLSIE 553 Query: 433 EVINYASHRFS 443 EV N F Sbjct: 554 EVYNRVRKEFE 564 >gi|75676225|ref|YP_318646.1| threonyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255] gi|74421095|gb|ABA05294.1| Ser-tRNA(Thr) hydrolase [Nitrobacter winogradskyi Nb-255] Length = 686 Score = 225 bits (574), Expect = 9e-57, Method: Composition-based stats. Identities = 73/443 (16%), Positives = 134/443 (30%), Gaps = 39/443 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + G+ W G V A +R Sbjct: 256 YLKQIEEAEKRDHRKLGRELDLF--HFQEEGPGVVFWHAKGWTIFQAVIAYMRRRL-AED 312 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-----KAMIYGPTHEEVMTDIFRS 120 E++ P + LW SG ++ Y + M D + P + +F+ Sbjct: 313 YDEVNAPQMLDKSLWETSGHWEWYRENMFAAQSAGDEAEDKRWFTIKPMNCPGHVQLFKH 372 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + + R E G+MR R F DA+ F + + + Sbjct: 373 GLKSYRDLPLRLAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEEQLADECLKINEL 432 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + ++ + P S A+ V + I +E Sbjct: 433 ILSTYADFGFDGELTVKLSTRPEKRVGSDAAWDHAEAVMADVLKHIAASNNRIRTE---- 488 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 A Y + L D++ + + ++ FG Sbjct: 489 --------TNPGEGAFYGPKFEY---VLRDAIGRDWQCGTTQVDFNLPERFG-------- 529 Query: 300 ATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + GK V + G++ ++ G +W V ++ + Sbjct: 530 AFYIDADGGKKAPVMVHRAICGSIERFIGILIEHFAGHFPLWLAPVQAVVTTITSDGD-- 587 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + + + + + G V D E+I + L P ++VG K V I Sbjct: 588 ----EYAKVVASAARRAGLRVELDLRNEKINYKVREHSLAKIPALLVVGKKEAETQSVSI 643 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + ++ E I Sbjct: 644 RRLGSDGQKVTPTGEAIAALVAE 666 >gi|291277468|ref|YP_003517240.1| prolyl-tRNA synthetase [Helicobacter mustelae 12198] gi|290964662|emb|CBG40517.1| prolyl-tRNA synthetase [Helicobacter mustelae 12198] Length = 577 Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats. Identities = 117/255 (45%), Positives = 163/255 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKYF+P L+ENP+DA + SH+ ++R G I Q GIY++LPLG+K L+ ++ IIREE Sbjct: 1 MRFSKYFIPTLKENPKDAVLKSHQYLVRGGFIEQIGSGIYNFLPLGKKVLEKISQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+EM+ + ++LW +SGRY+ YGKE+LR DR + + GPT EE +T++ ++ Sbjct: 61 MNEAGALEMAAGFVVPSELWKQSGRYEKYGKELLRFKDRRENEFVLGPTCEEALTNLAKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY++LP FYQI LKFRDE+RPRFG+MR REF+MKDAYSF E + M + Sbjct: 121 LIKSYKSLPLNFYQIHLKFRDEVRPRFGLMRGREFIMKDAYSFHANFEDLDREFENMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL + A+SG IGG S EF+VLAD GE + ++ Sbjct: 181 YCRIFTRLGLDFRVVDADSGAIGGSGSKEFMVLADCGEDIIVVCENCDYAANIEAAKRKK 240 Query: 241 DIISLNSIVEQWTAP 255 + S+ + ++ Sbjct: 241 KLSSIEAPRAEFAKF 255 Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats. Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 1/217 (0%) Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 TG + ++ D + D + + + A + + K Sbjct: 354 TGAKWIIFDEELRDERDLICGANERDYHFVGVDLSTFEGLVYADLVNVQAGDVCTCCDGK 413 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 +GIEVGHIF GTKYS M A F +GK MG YGIG R++ A++E D Sbjct: 414 LTHKKGIEVGHIFKLGTKYSQAMQAVFLDQNGKSQAFVMGCYGIGVSRLLPAILEQKSDA 473 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 G +W + APFK+ +I + + +++Y L + G DV DD E+ G + Sbjct: 474 LGCVWSSTTAPFKVVIIPSNKKNPSEVEFSQRLYENLLQRGVDVLLDDRDERFGFKMKDF 533 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 +L+GF ++VG K + +VEI R ++ +S + Sbjct: 534 ELIGFEFAIVVG-KELEGGRVEIFEREGMQKQVVSAD 569 >gi|241764278|ref|ZP_04762308.1| threonyl-tRNA synthetase [Acidovorax delafieldii 2AN] gi|241366347|gb|EER60877.1| threonyl-tRNA synthetase [Acidovorax delafieldii 2AN] Length = 639 Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats. Identities = 81/443 (18%), Positives = 137/443 (30%), Gaps = 36/443 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L I H+ G+ W P G V +R Sbjct: 230 QYLTMLEEAEKRDHRKLGRELDLF--HIDDHAPGVVFWHPKGWAVWQQVEQYMRRVYRDN 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G +E+ P L LW ++G +D Y M + + P + IF+ IKS Sbjct: 288 GYLEVKGPQLLDKTLWEKTGHWDKYRDNMFT-TESEKRDYALKPMNCPGHILIFKQGIKS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + + R+E G+MR R F D + F + Sbjct: 347 YRDLPLRYGEFGQCHRNEPTGGLHGIMRVRGFTQDDGHIFCTEDHILPECTAYT-ALLQK 405 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G +I + + P S E D + Sbjct: 406 VYKDFGFSNIIYKVATRPEARIGSDE-----------------SWDKAEHALMESLRASG 448 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I A Y + L D++ + ++ + A + Sbjct: 449 CEFEIAPGDGAFYGPKIEY---TLKDAIGRQWQCGTMQVDFSMP--------ERLDAEYV 497 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG H + +G++ ++ H G W L A CR Sbjct: 498 GEDGARHRPVMLHRAIVGSLERFIGILIEQHSGALPTWL--APVQISVLNITDAQADYCR 555 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + K+ L V D E+I + L P ++ G K + V ++ R Sbjct: 556 EIAAKLQKLLPHQDLRVGLDLRNEKITYKIREHSLQKLPYILVAGDKEKAAGAVAVRARG 615 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 MS+E + ++ Sbjct: 616 NRDLGVMSVEAFAELIAQDIASK 638 >gi|293556646|ref|ZP_06675211.1| prolyl-tRNA synthetase [Enterococcus faecium E1039] gi|291601181|gb|EFF31468.1| prolyl-tRNA synthetase [Enterococcus faecium E1039] Length = 569 Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats. Identities = 114/273 (41%), Positives = 160/273 (58%), Gaps = 3/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK +P L+E P DAE+ SH+++LR G I Q S GIYS+LPL + L+ + I+REE Sbjct: 1 MRQSKILIPTLREVPNDAEVLSHQILLRAGYIRQVSAGIYSYLPLANRVLEKLKRIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM +P + A+LW ESGRY++YG + R DRND+ MI GPTHEE TD+ R+ Sbjct: 61 FEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRNDRKMILGPTHEETFTDLMRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPRFG++R REF+MKDAYSF T E +Y + Sbjct: 121 EINSYKKLPLNLYQIQPKYRDEKRPRFGLLRGREFIMKDAYSFHATEESLDETYKDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--D 238 Y +F R GL+ + + G +GG S EF+ +++ GE + C D+ E Sbjct: 181 YTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAISEIGEDTI-CYSTESDYAANLEMATSY 239 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + S + +E + F S+ Sbjct: 240 YVSKKSHETQLELEKVATPNVKSIDEVADFFSV 272 Score = 149 bits (377), Expect = 7e-34, Method: Composition-based stats. Identities = 70/231 (30%), Positives = 117/231 (50%), Gaps = 6/231 (2%) Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP-YAATSDVHNEKLFDSLPEN 274 + + +V+ + D T ++ V + D+ + D P+N Sbjct: 339 SDDVKVYADRYVQDLANAI--TGANETGFHYKNVNPERDFTVLSYEDLRFVQEGDPSPDN 396 Query: 275 KRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 V RGIE+GHIF GT+YS M AT +G++ +V MG YGIG R+++A++E Sbjct: 397 NGVLAFTRGIEIGHIFKIGTRYSESMGATVLDENGREKFVIMGCYGIGVSRLLSAIVEQH 456 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 D +GI WP +APF + ++ + D+ ++ ++K G +V DD E+ G +F Sbjct: 457 SDEQGINWPKGIAPFDLHIVQMNLKDEYQTSLTNELEEAMTKAGYEVLVDDRNERAGVKF 516 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 A +DL+G P+++ VG K V D VE+K + TG ++ EE+ N + Sbjct: 517 ADSDLIGCPIRITVGKKAV-DGIVEVKIKKTGEMVEVRKEELANTLPILLN 566 >gi|227496236|ref|ZP_03926533.1| threonine--tRNA ligase [Actinomyces urogenitalis DSM 15434] gi|226834224|gb|EEH66607.1| threonine--tRNA ligase [Actinomyces urogenitalis DSM 15434] Length = 679 Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats. Identities = 73/454 (16%), Positives = 146/454 (32%), Gaps = 45/454 (9%) Query: 5 KYFLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L + RD +L L + + G+ + P G + + E R Sbjct: 243 KAYQTRLAEAAKRDHRKLGAELDLFS-FPEEIGPGLVVFHPKGGMLRHEIEKYVIERHER 301 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHE 111 G + P + A L+ SG Y M + + + Sbjct: 302 AGFDFVHTPEITKAGLFHTSGHLPYYADTMFPPMLADEETDAEGNVTKAGQEYYLKAMNC 361 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IFRS +SYR LP +++ +R E G+ R R F D++++ + Sbjct: 362 PMHNLIFRSRGRSYRELPLRLFEMGHDYRYEKSGVVHGLTRMRGFTQDDSHTYCTREQAP 421 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + K ++ I GL + + G +FI + + Sbjct: 422 EE-IKKQIEFFISILKAFGLTDFYLELSTRDEDGAKKDKFIGSDED-----------WEA 469 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + A Y + ++ D++ ++S + Sbjct: 470 ATRTLSQVCASTGLDLVPDPGGAAFYGPKV---SVQVKDAIGRTWQMSTIQYDFNQP--- 523 Query: 291 GTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 + ADG + S +G++ V+ + +P +AP ++ Sbjct: 524 -----ERFDLEYTAADGSHQRPIMLHSAKLGSVERFIGVLT---EHYAGAFPAWLAPVQV 575 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 LI + + D ++ ARL + G V D ++ G + A P +I G + Sbjct: 576 RLIPVA---EAFDDYVTQVAARLRERGVRVETDLSDDRFGKKIRNASKEKVPFTLIAGGE 632 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 V + R + ++E I + + + Sbjct: 633 DAEAGAVSFRFRDGEQTNGVPVDEAIEHIADVIA 666 >gi|167817496|ref|ZP_02449176.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 91] gi|167847384|ref|ZP_02472892.1| prolyl-tRNA synthetase [Burkholderia pseudomallei B7210] gi|167904356|ref|ZP_02491561.1| prolyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177] gi|167912616|ref|ZP_02499707.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 112] Length = 568 Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats. Identities = 127/225 (56%), Positives = 162/225 (72%), Gaps = 1/225 (0%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 ++E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE NR GAIE+ Sbjct: 1 MKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREEMNRAGAIELL 60 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ IKSYR +P Sbjct: 61 MPAVQPAELWQESGRWEQYGPELLRFKDRKQNEFVIGPTHEEVVTDIARNQIKSYRQMPV 120 Query: 131 TFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD E K SY KM+ +Y+RIF R+GL Sbjct: 121 NFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDHESLKESYKKMYDAYVRIFTRIGL 180 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 + P+ A++G IGG SHEF V+ADTGE + DF E Sbjct: 181 EFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPT-SDFAANVE 224 Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 70/179 (39%), Positives = 101/179 (56%), Gaps = 3/179 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 372 PEPVVADIRNVKAGDPSPDGKGALDICRGIEVGHVFQLGTKYSDAMGATFIDESGKAQPM 431 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE + D KGI+WP+++APF++ L + R+A +K+YA Sbjct: 432 VMGCYGIGITRILGAAIEQNFDDKGIVWPEAIAPFEVVLCPMGYDRSDAVREAADKLYAD 491 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R + Sbjct: 492 LAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGRRDAEATLLP 550 >gi|299143351|ref|ZP_07036431.1| proline--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517836|gb|EFI41575.1| proline--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 584 Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats. Identities = 109/242 (45%), Positives = 154/242 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK ++P L+E P DAEIASH+L+LR I + + GIY++LPLG K + V I+REE Sbjct: 1 MKLSKLYMPTLREVPADAEIASHQLLLRGAFIRKSASGIYTYLPLGYKVIKKVEKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ + +Q ++W S R+D +G EM +L DRND+ GPT EE T + + Sbjct: 61 MDRAGSQEILMSAIQPKEIWEASDRWDRFGPEMFKLRDRNDREFCLGPTAEEYFTTLIKD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPRFG+ R+REF MKDAYSFD TPE + SY +M+ + Sbjct: 121 EVKSYKQLPLNLYQIQTKYRDEKRPRFGINRAREFSMKDAYSFDTTPETMQVSYMEMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF RLGL + ++G +GG SHEFI L++TGE + S + Sbjct: 181 YEKIFDRLGLDYKIVEGDNGAMGGKKSHEFIALSETGEGVIAYSPTGKYAATQEKAKVVY 240 Query: 241 DI 242 ++ Sbjct: 241 EL 242 Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats. Identities = 65/173 (37%), Positives = 100/173 (57%), Gaps = 1/173 (0%) Query: 273 ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 K ARGIEVG+IF GTKYS ++AT+ +GK+ + MGSYG+G R V A++E + Sbjct: 397 NEKFKFARGIEVGNIFQLGTKYSEALNATYLDENGKEQLIWMGSYGVGVTRTVTAIVEQN 456 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 +D GIIWP SVAP+ + + + D++ + EKIY L ++G +V DD E+ G +F Sbjct: 457 YDENGIIWPMSVAPYHVIVTVVNPKDEIQLELGEKIYNSLVELGHEVLLDDRNERAGVKF 516 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 DL+G P+++ VG + + VE R + ++ +E I S N+ Sbjct: 517 KDRDLIGIPIRITVGKRAAEE-IVEYSLRRETEKTEIFAKEAIEKVSGEIFNS 568 >gi|16331761|ref|NP_442489.1| threonyl-tRNA synthetase [Synechocystis sp. PCC 6803] gi|2501062|sp|Q55806|SYT_SYNY3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|1001722|dbj|BAA10559.1| threonyl-tRNA synthetase [Synechocystis sp. PCC 6803] Length = 603 Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats. Identities = 69/447 (15%), Positives = 148/447 (33%), Gaps = 40/447 (8%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + +E RD +L L G+ W P G + +++EQ + G Sbjct: 186 YQRRKEEALKRDHRKLGKELGLFI-FADPVGPGLPLWTPKGTIIRTILEDFLKQEQIKRG 244 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADR------NDKAMIYGPTHEEVMTDIFR 119 + + P + DL+ +SG + Y ++M + + + P + I++ Sbjct: 245 YLPVVTPHIARVDLFKQSGHWQKYQEDMFPMMAESPEEAAQEMGFVLKPMNCPFHIQIYK 304 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 S ++SYR+LP + +R E G + D +TP+ + + Sbjct: 305 SELRSYRDLPLRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLDEEFLSVVD 364 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L +F L LK+ R D + S + + + Sbjct: 365 LILTVFKSLQLKNFKARLS--------------FRDPESDKYIGSDEAWEKAQGAIRRAV 410 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ A Y D D+L ++ ++ Sbjct: 411 QELEMDYFEAPGEAAFYGPKLDFI---FQDALEREWQLGTVQVDYNLP--------ERFD 459 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + ADG + G++ + ++ + G +W + + A Sbjct: 460 LEYIAADGSRQRPVMIHRAPFGSLERLIGILIEEYAGDFPLW------LAPIQVRLLAVS 513 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + I ++ +G D G+++G A+ P+ ++G+K V + + I Sbjct: 514 DEFLPFAQSIVQQMQSLGLRAEVDTSGDRLGKMIRNAEKQKIPVMAVIGAKEVEANALNI 573 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R +G ++ + EV+ +N+ Sbjct: 574 RTRASGELGEIPVTEVLEKLQATVTNH 600 >gi|332638317|ref|ZP_08417180.1| threonyl-tRNA synthetase [Weissella cibaria KACC 11862] Length = 658 Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats. Identities = 66/437 (15%), Positives = 141/437 (32%), Gaps = 32/437 (7%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + RD + L + G+ W+P G + I + + + G Sbjct: 237 RREEAKERDHRKIGAEQDLF-FTSQEVGAGLAVWMPNGAAIRRTLERYIVDREVQDGYQH 295 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRN 127 + P + + +L+ +SG +D Y +M D D P + +F+ +SYR Sbjct: 296 VYTPIMSNLNLYKQSGHWDHYRDDMFPPMDMGDGEFLELRPMNCPSHIMVFKHKPRSYRE 355 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 LPF ++ + R E + + + + P+ + + K+ + ++ Sbjct: 356 LPFRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVMPDQIEDEFKKILGLMIDVYAD 415 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDIISLN 246 + R D T+ + D + DD+ Sbjct: 416 FDITDYRFRLS--------------YRDPENTEKYYDDDDMWEKAQTMLKKAMDDLELDY 461 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y DV ++ +L + +S ++ F ++ + G D Sbjct: 462 FEAEGEAAFYGPKLDV---QIKTALGGEETLSTIQLD----FLLPERFD----VNYVGPD 510 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 G+ H M GI + + + + I + + Sbjct: 511 GELHRPVMIHRGIISTMERFTAYLTEMYKGAFPTWLAPHQVR----IIPVNRDAHGKFAK 566 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + RL K G ++D E++G A P +++G + V+++ V I+ + Sbjct: 567 DLADRLIKQGIRAEYEDRNEKLGYLIRDAQTSKVPYTLVIGDEEVNNNTVTIRRFGSTDT 626 Query: 427 EDMSLEEVINYASHRFS 443 + S++ + Sbjct: 627 KSKSVDAFEAQLMADIA 643 >gi|297198372|ref|ZP_06915769.1| threonyl-tRNA synthetase [Streptomyces sviceus ATCC 29083] gi|197714430|gb|EDY58464.1| threonyl-tRNA synthetase [Streptomyces sviceus ATCC 29083] Length = 658 Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats. Identities = 71/440 (16%), Positives = 135/440 (30%), Gaps = 38/440 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + Q G+ + P G + R G + Sbjct: 254 EAEKRDHRKLGSELDLFS-IPEQIGSGLAVFHPKGGIIRRVMEDYSRRRHEEEGYEFVYT 312 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P L+ +SG D Y M P + + IF + +SYR LP Sbjct: 313 PHATKGKLFEQSGHLDWYADGMYPPMQLDEGVDYYLKPMNCPMHNLIFDARGRSYRELPL 372 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 ++ +R E G+ R+R F DA+ + + S+ +K L + G Sbjct: 373 RLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQMSEEL-DKTLTFVLGLLRDYG 431 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 L + + + S + + + + Sbjct: 432 LTDFYLELST----------------KDPEKFVGSDEVWEEATETLRQVAEKQGLPLVPD 475 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y + + D++ ++S ++ F ++ + DG Sbjct: 476 PGGAAFYGPKI---SVQTKDAIGRTWQMSTIQLD----FNLPERF----ELEYTSPDGSK 524 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + G++ AV+ + +P +AP + I I + EK Sbjct: 525 QRPVMIHRALFGSIERFFAVLL---EHYAGAFPAWLAPVQALGIPIG---DAHVEYLEKF 578 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 A K G V D +++ + A P VI G + ++ V ++R Sbjct: 579 AAAAKKQGLRVEVDSSSDRMQKKIRNAQKQKVPFMVIAGDEDMAGGSVSFRYRDGSQENG 638 Query: 429 MSLEEVINYASHRFSNNRPV 448 + +E I + V Sbjct: 639 IPFDEAIAKIAKVVEERAQV 658 >gi|167721308|ref|ZP_02404544.1| prolyl-tRNA synthetase [Burkholderia pseudomallei DM98] Length = 568 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 127/225 (56%), Positives = 163/225 (72%), Gaps = 1/225 (0%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 ++E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE NR GAIE+ Sbjct: 1 MKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREEMNRAGAIELL 60 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 +P +Q A+LW ESGR++ YG E+LR+ DR + GPTHEEV+TDI R+ IKSYR +P Sbjct: 61 MPAVQPAELWQESGRWEQYGPELLRIKDRKQNEFVIGPTHEEVVTDIARNQIKSYRQMPV 120 Query: 131 TFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD E K SY KM+ +Y+RIF R+GL Sbjct: 121 NFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDHESLKESYKKMYDAYVRIFTRIGL 180 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 + P+ A++G IGG SHEF V+ADTGE + DF E Sbjct: 181 EFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPT-SDFAANVE 224 Score = 166 bits (420), Expect = 7e-39, Method: Composition-based stats. Identities = 70/179 (39%), Positives = 101/179 (56%), Gaps = 3/179 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 372 PEPVVADIRNVKAGDPSPDGKGALDICRGIEVGHVFQLGTKYSDAMGATFIDESGKAQPM 431 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE + D KGI+WP+++APF++ L + R+A +K+YA Sbjct: 432 VMGCYGIGITRILGAAIEQNFDDKGIVWPEAIAPFEVVLCPMGYDRSDAVREAADKLYAN 491 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R + Sbjct: 492 LAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGRRDAEATLLP 550 >gi|227510530|ref|ZP_03940579.1| threonine--tRNA ligase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190182|gb|EEI70249.1| threonine--tRNA ligase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 658 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 79/451 (17%), Positives = 162/451 (35%), Gaps = 39/451 (8%) Query: 2 RRSKY---FLPILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAII 57 ++S+ + + RD + ++L L + + G+ W+P G + I Sbjct: 236 KQSELDEDLKKRQEAHERDHRVIGNQLDLF--FVDPKVGAGLPYWMPNGATIRRTIERYI 293 Query: 58 REEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTD 116 +++ G + P L + DL+ +SG ++ Y ++M D D + + P + Sbjct: 294 VDKEVANGYEHVYTPVLANLDLYKQSGHWEHYREDMFPPMDMGDGEELELRPMNCPSHIQ 353 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 I+ HI+SYR LP ++ + R E G+ R RE + D ++F + + N Sbjct: 354 IYNHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIQEEFQN 413 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 + + + D T+ + D M S Sbjct: 414 ILKLMVEVYHDFDINDYTFR---------------LSYRDPENTEKYFDDDEMWNRAQSM 458 Query: 236 -NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY 294 D++ E A Y DV + +L + +S ++ F ++ Sbjct: 459 LKGAMDELGLDYVEAEGEAAFYGPKLDVQTKT---ALGNEETLSTIQLD----FMLPERF 511 Query: 295 SLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 L + G DGK H M G + + + + +P +AP ++ +I + Sbjct: 512 DLH----YVGEDGKQHRPVMIHR--GLVSTMERFVAYLTEIYKGAFPTWLAPHQVKIIPV 565 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 D ++I +L ++ D E++G A P ++VG + V+ Sbjct: 566 --SQDKHGDYAKQINDQLRRLKIRSSVDTRAEKMGYLIRDAQTHKIPYTLVVGDEEVNGK 623 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V ++ + SL+ ++ ++ Sbjct: 624 SVSVRRYGEKETQAESLDAFVDEIQKDIASY 654 >gi|145594327|ref|YP_001158624.1| threonyl-tRNA synthetase [Salinispora tropica CNB-440] gi|145303664|gb|ABP54246.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Salinispora tropica CNB-440] Length = 671 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 70/444 (15%), Positives = 131/444 (29%), Gaps = 35/444 (7%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E R D L L + + G+ + P G + +R Sbjct: 250 KAYLRLLEEAARRDHRKLGADLDLFS-FPDEIGSGLPVFHPKGGVLKRTMEDYVRSRHIE 308 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + L+ SG Y M + + I+RS + Sbjct: 309 EGFDYVGTPHISKEGLFHTSGHLPYYADGMFPPMQFEGADYYLKAMNCPMHNLIYRSRGR 368 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ +R E G+ R R F D++S+ + + L Sbjct: 369 SYRELPMRLFEFGSVYRYEKSGVIHGLTRVRGFTQDDSHSYCTKEQAPAE-IKHLLAFVL 427 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + G+ + + DT + S + D Sbjct: 428 GLLQDFGITDFFLELSTRD-------------DTKPDKFVGSAEDWATATAVLEQCARDT 474 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + + D++ ++S + FG + Sbjct: 475 GLELVPDPGGAAFYGPKI---SVQAKDAIGRTWQMSTIQYDFNQPAGFG--------LEY 523 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + ADG + G++ V+ + G W V I + Sbjct: 524 QAADGTRQQPIMIHCAKFGSIERFIGVLTEHYAGAFPAWLAPVQVVGIPI------RAEH 577 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + A L G D +++ + A P VI G V+ + ++R Sbjct: 578 TEYLDGFVAALRAAGIRAQVDAGDDRMQKKIRTAQQQKIPFMVIAGDDDVAAGTMSFRYR 637 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 R + E +N+ ++ Sbjct: 638 DGSQRNGVPAAEAVNHVLDVVNSR 661 >gi|312384017|gb|EFR28854.1| hypothetical protein AND_02684 [Anopheles darlingi] Length = 766 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 74/433 (17%), Positives = 149/433 (34%), Gaps = 40/433 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + IR E + G E+ Sbjct: 269 EEAAKRDHRKLGREQELF--FFHELSPGSCFFQPKGAFIYNTLMNFIRAEYRKRGFQEVI 326 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + +A LW SG + Y + M + P + IF +S+R LP Sbjct: 327 SPNIYNAKLWQTSGHWQHYAENMFSFESEKET-FALKPMNCPGHCLIFDHRNRSWRELPL 385 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + + + ++ G Sbjct: 386 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCMPDQIREE-ITGCLDFLRHVYTVFG 444 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + P E + + D Sbjct: 445 FTFNLV-LSTRPEKYLGEIE-----------------VWNEAEKALAESLDKFGEPWKEN 486 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + + + ++ F +++L + K Sbjct: 487 PGDGAFYGPKIDI---TIMDALKRHHQCATIQLD----FQLPIRFNLNY---VDDSGEKK 536 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + +G++ + A++ + WP ++P ++ ++ + + +K+ Sbjct: 537 RPVIIHRAVLGSVERMIAILT---ENYAGKWPFWLSPRQVMVVPVGP---AYDEYADKVR 590 Query: 370 ARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 RL G V D D G+ + + A L F ++VG K S V ++ R + + Sbjct: 591 LRLHDAGFTVEADLDAGDTMNKKIRNAQLAQFNFILVVGEKERSSETVNVRTRDNKVHGE 650 Query: 429 MSLEEVINYASHR 441 ++++E++ + Sbjct: 651 VTVDELVTKLAKL 663 >gi|167895971|ref|ZP_02483373.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 7894] Length = 568 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 127/225 (56%), Positives = 162/225 (72%), Gaps = 1/225 (0%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 ++E P DAEI SHKLM+R GMI + + GIY++LP+G +++ V AI+REE NR GAIE+ Sbjct: 1 MKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREEMNRAGAIELL 60 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 +P +Q A+LW ESGR++ YG E+LR DR + GPTHEEV+TDI R+ IKSYR +P Sbjct: 61 MPAVQPAELWQESGRWEQYGPELLRFKDRKQNEFVIGPTHEEVVTDIARNQIKSYRQMPV 120 Query: 131 TFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 FYQIQ KFRDE+RPRFGVMR REF+MKDAYSFD E K SY KM+ +Y+RIF R+GL Sbjct: 121 NFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDHESLKESYKKMYDAYVRIFTRIGL 180 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 + P+ A++G IGG SHEF V+ADTGE + DF E Sbjct: 181 EFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPT-SDFAANVE 224 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 70/179 (39%), Positives = 101/179 (56%), Gaps = 3/179 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P +D+ N K D P+ K RGIEVGH+F GTKYS M ATF GK + Sbjct: 372 PEPVVADIRNVKAGDPSPDGKGALDICRGIEVGHVFQLGTKYSDAMGATFIDESGKAQPM 431 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++ A IE + D KGI+WP+++APF++ L + R+A +K+YA Sbjct: 432 VMGCYGIGITRILGAAIEQNFDDKGIVWPEAIAPFEVVLCPMGYDRSDAVREAADKLYAD 491 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L+ G DV DD GE+ G FA +L+G P ++++G + + D K+E + R + Sbjct: 492 LAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYRGRRDAEATLLP 550 >gi|328881181|emb|CCA54420.1| Threonyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712] Length = 640 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 67/440 (15%), Positives = 140/440 (31%), Gaps = 38/440 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD ++L L + + + G+ + P G + R+ G + Sbjct: 236 EAEKRDHRKLGNELDLFS-IPDEIGSGLAVFHPKGGIIRRVMEDYSRKRHEEEGYEFVYS 294 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P L+ +SG D Y + M P + + IF + +SYR LP Sbjct: 295 PHATKGKLFEKSGHLDWYAEGMYPPMQLDEGVDYYLKPMNCPMHNLIFDARGRSYRELPL 354 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 ++ +R E G+ R+R F DA+ + + ++ +K L + G Sbjct: 355 RLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTKEQMAEEL-DKTLTFVLNLLRDYG 413 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 L + + + S + + + + Sbjct: 414 LTDFYLELST----------------KDPEKFVGSDEIWEEATAVLQQVAEKQGLPLTPD 457 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y + + D++ ++S ++ F ++ + DG Sbjct: 458 PGGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FNLPERFD----LEYTAPDGTK 506 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + G++ AV+ + P +AP + + I I D + Sbjct: 507 QRPVMIHRALFGSIERFFAVLL---EHYAGAMPPWLAPVQATGIPIG---DAHVDYLHEF 560 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 A+ K G V D +++ + A P +I G + ++ V ++R Sbjct: 561 AAKAKKQGLRVDVDSSSDRMQKKIRNAQKQKVPFMIIAGDEDMAAGAVSFRYRDGSQENG 620 Query: 429 MSLEEVINYASHRFSNNRPV 448 + ++E I + + V Sbjct: 621 IPVDEAIAKIAKIVEDRVQV 640 >gi|116617774|ref|YP_818145.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122272025|sp|Q03YF0|SYT_LEUMM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|116096621|gb|ABJ61772.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 652 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 73/441 (16%), Positives = 141/441 (31%), Gaps = 35/441 (7%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + RD + L L + G+ WLP G V I +++ G Sbjct: 238 RREEAKERDHRVIGRDLDLF-FTSQEVGSGLPVWLPNGATIRRQVERYITDKELSNGYQH 296 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRN 127 + P L + +L+ SG +D Y ++M D D P + +F +SYR Sbjct: 297 VYTPVLSNLNLYKTSGHWDHYREDMFPPMDMGDGEFLELRPMNCPSHIMVFNHKPRSYRE 356 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 LP ++ + R E + + + + PE + + + + ++ Sbjct: 357 LPMRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVEPEKLEEEFKSILTMMMGVYRD 416 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDIISLN 246 +K R D T+ + D + T DD+ Sbjct: 417 FNIKDYRFRLS--------------YRDPKNTEKYFDDDEMWEKSQKQLKTAMDDLGLDY 462 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y DV + +L + +S ++ F ++ + G D Sbjct: 463 FEAEGEAAFYGPKLDVQTKT---ALGNEETLSTIQLD----FLLPERFD----LKYIGRD 511 Query: 307 G--KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 G V + +G M A + + G W ++P ++ +I + + Sbjct: 512 GLDNHRPVMLHRGIVGTMERFTAYLIEMYKGAFPTW---LSPLQVQIIPVNLG--AHGNY 566 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + +L G + ++G A P +++G V+ + V ++ Sbjct: 567 ANAVQQKLQDAGLRANVETKDAKMGYLIREAQTNKIPYTLVLGDSEVNSNTVTVRKYGDT 626 Query: 425 IREDMSLEEVINYASHRFSNN 445 MS +E SN Sbjct: 627 KTVTMSYDEFQYLILSDVSNY 647 >gi|297195484|ref|ZP_06912882.1| threonyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486] gi|197722098|gb|EDY66006.1| threonyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486] Length = 657 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 68/440 (15%), Positives = 133/440 (30%), Gaps = 38/440 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + Q G+ + P G + R+ G + Sbjct: 253 EAEKRDHRKLGSELDLFS-IPEQIGSGLAVFHPKGGIIRRVMEDYSRKRHEEEGYEFVYT 311 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P L+ SG D Y M P + + IF + +SYR LP Sbjct: 312 PHATKGKLFETSGHLDWYADGMYPPMQLDEGVDYYLKPMNCPMHNLIFDARGRSYRELPL 371 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 ++ +R E G+ R+R F DA+ + + + + L + G Sbjct: 372 RLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTKEQMADEL-DSTLTFVLNLLRDYG 430 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 L + + + S + + + + Sbjct: 431 LTDFYLELST----------------KDPEKFVGSDEVWEEATETLRQVAEKQGLPLVPD 474 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y + + D++ ++S ++ F ++ + G DG Sbjct: 475 PGGAAFYGPKI---SVQAKDAIGRTWQMSTVQLD----FNLPERFD----LEYTGPDGTK 523 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 H + G++ AV+ + P +AP + I I + + Sbjct: 524 HRPVMIHRALFGSIERFFAVLL---EHYAGAMPPWLAPVQAVGIPIG---DAHVEYLQDF 577 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 A K G V D +++ + L P +IVG ++ V ++R Sbjct: 578 AADAKKKGLRVEVDSSSDRMQKKIRNQQKLKVPFMIIVGDDDMNAGTVSFRYRDGSQENG 637 Query: 429 MSLEEVINYASHRFSNNRPV 448 + E+ + + V Sbjct: 638 IPREDALAKIADVVERRVQV 657 >gi|227432351|ref|ZP_03914343.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351872|gb|EEJ42106.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 652 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 73/441 (16%), Positives = 141/441 (31%), Gaps = 35/441 (7%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + RD + L L + G+ WLP G V I +++ G Sbjct: 238 RREEAKERDHRVIGRDLDLF-FTSQEVGSGLPVWLPNGATIRRQVERYITDKELSNGYQH 296 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRN 127 + P L + +L+ SG +D Y ++M D D P + +F +SYR Sbjct: 297 VYTPVLSNLNLYKTSGHWDHYREDMFPPMDMGDGEFLELRPMNCPSHIMVFNHKPRSYRE 356 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 LP ++ + R E + + + + PE + + + + ++ Sbjct: 357 LPMRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVEPEKLEEEFKSILTMMMGVYRD 416 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDIISLN 246 +K+ R D T+ + D + T DD+ Sbjct: 417 FNIKNYRFRLS--------------YRDPKNTEKYFDDDEMWEKSQKQLKTAMDDLGLDY 462 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y DV + +L + +S ++ F ++ + G D Sbjct: 463 FEAEGEAAFYGPKLDVQTKT---ALGNEETLSTIQLD----FLLPERFD----LKYIGRD 511 Query: 307 G--KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 G V + +G M A + + G W ++P ++ +I + + Sbjct: 512 GLDNHRPVMLHRGIVGTMERFTAYLIEMYKGAFPTW---LSPLQVQIIPVNLG--AHGNY 566 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + +L G + ++G A P +++G V + V ++ Sbjct: 567 ANAVQQKLQDAGLRANVETKDAKMGYLIREAQTNKIPYTLVLGDSEVDSNTVTVRKYGDT 626 Query: 425 IREDMSLEEVINYASHRFSNN 445 MS +E SN Sbjct: 627 KTVTMSYDEFQYLILSDVSNY 647 >gi|319892279|ref|YP_004149154.1| Prolyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03] gi|317161975|gb|ADV05518.1| Prolyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03] Length = 567 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 109/237 (45%), Positives = 159/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L+E P +AE SH+L+L+ G+I Q++ G+YS+LP+ + + ++ IIR+E Sbjct: 1 MKQSKVFIPTLREVPAEAEAISHQLLLKAGLIKQNAAGVYSYLPVATRVIHKISDIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R A+E+ +P LQ ++LW ESGR+D+YG E++RL DRN + GPTHEEV+T + R Sbjct: 61 MERIDAVEVVMPVLQQSELWKESGRWDAYGMELMRLRDRNQREFALGPTHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF E +Y M+ + Sbjct: 121 ELRSYKQLPLTLFQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHTDEESLMETYQNMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF R+GL P+ A+SG IGG+ +HEF L+ GE + + D+ E Sbjct: 181 YSTIFKRVGLNVRPVVADSGAIGGNHTHEFHALSAIGEDTIVY-SNNSDYAANIEKA 236 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 66/164 (40%), Positives = 97/164 (59%), Gaps = 4/164 (2%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIEVG +F G KYS M AT G++ + MG YGIG R ++A+IE HD GIIW Sbjct: 405 GIEVGQVFVLGEKYSEAMKATVLNQQGREQNLTMGCYGIGVSRTLSAIIEQHHDDNGIIW 464 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG-CDVFWDDMGEQIGSQFAVADLLG 399 P SV PF + LI++ R +++Y +L +G DV +DD E+ G +F ADL+G Sbjct: 465 PKSVTPFDVHLISVNPKKDEQRACADRLYDQL--LGTYDVLYDDRNERAGVKFNDADLIG 522 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 P++V+VG K S+ VE+K R TG ED+ + +++ + + Sbjct: 523 IPVRVVVG-KNASEGIVEVKRRDTGDSEDVHVNDLVTHLEKLYE 565 >gi|289550945|ref|YP_003471849.1| Bacterial type prolyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] gi|315658447|ref|ZP_07911319.1| proline--tRNA ligase [Staphylococcus lugdunensis M23590] gi|289180477|gb|ADC87722.1| Bacterial type prolyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] gi|315496776|gb|EFU85099.1| proline--tRNA ligase [Staphylococcus lugdunensis M23590] Length = 566 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 120/289 (41%), Positives = 176/289 (60%), Gaps = 5/289 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK F+P ++E P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N++ IIREE Sbjct: 1 MRQSKVFIPTMREVPAEAEALSHQLLLKAGLIKQSTSGIYSYLPLATRVLNNISKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T + R Sbjct: 61 MERIDAVEILMPVLQQAELWEESGRWSAYGPELMRLKDRNGREFALGPTHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKRLPLTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDATYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+G+ P+ A+SG IGG+ +HEF+ L+ GE + + D+ E + Sbjct: 181 YGRIFKRVGINVRPVLADSGAIGGNHTHEFMALSKIGEDTIVY-SNESDYAANIEKAE-- 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY 289 + ++ ++ + N K L + ++ I IF Sbjct: 238 --VVYQPQRQEESSADLTKIETPNVKTAQELADFLQLPLNAIVKSMIFK 284 Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats. Identities = 65/173 (37%), Positives = 102/173 (58%), Gaps = 2/173 (1%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 K A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E Sbjct: 395 GSGKAQFAEGIEVGQVFKLGTKYSEAMNATFLDNQGKAQPLIMGCYGIGVSRTLSAIVEQ 454 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 ++D GIIWP +V PF + LI + + + + +Y +L+ + DV +DD E+ G + Sbjct: 455 NNDDNGIIWPKTVTPFDLHLITVNPKKEEQQSLADNLYEQLNGM-FDVLYDDRKERAGVK 513 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 F ADL+G P++++VG + ++ VE+K R TG ED+ +E++ Y ++ Sbjct: 514 FNDADLIGLPIRIVVGKQ-AAEGIVEVKVRRTGTSEDVHVEQLEQYIKAIYNE 565 >gi|66806197|ref|XP_636821.1| threonyl-tRNA synthetase [Dictyostelium discoideum AX4] gi|74852684|sp|Q54J66|SYTC1_DICDI RecName: Full=Probable threonyl-tRNA synthetase 1, cytoplasmic; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|60465220|gb|EAL63315.1| threonyl-tRNA synthetase [Dictyostelium discoideum AX4] Length = 710 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 80/436 (18%), Positives = 148/436 (33%), Gaps = 37/436 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD L H +S G +LP G + + + IREE +R G E+ Sbjct: 311 EAALRDHRNVGKAQELF--FFHPYSPGSAFFLPHGTRIYNKLVEFIREEYHRRGFTEVIS 368 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P++ S LW +SG + Y + M L D P + +F S +SYR LP Sbjct: 369 PSIFSQKLWEQSGHWQKYSENMFVLPVDKDN-FSLKPMNCPGHCLMFGSRQRSYRELPLR 427 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 F + R+EL G+ R R+F DA+ F T Sbjct: 428 FADFGVLHRNELAGALTGLTRVRKFQQDDAHIFCTTEMIEDEI----------------- 470 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + G EF + T D S + + Sbjct: 471 --NSCLGFMQYVYGIFGFEFGLELSTRPDNFLGEIAQWDIAEASLEKALNKFGKPWKLNP 528 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A Y D+H + D L + + + ++ F ++ L + K Sbjct: 529 KDGAFYGPKIDIH---ITDCLKRSHQCATIQLD----FQLPIRFDLEYQSDDAAELKKRP 581 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + + R++A +IE + + A ++ + +K+ Sbjct: 582 VIIHRAILGSVERMMAILIEHTGGKWPLWVSPRQAIVVTV-------NKTHNEYGQKVCK 634 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +S G DD + I + A L + ++VG + ++ + V ++ R +R ++ Sbjct: 635 EISDAGFYCDIDDSDKTISKKVREAQLAQYNYILVVGQEEINGNTVNVRTRDNVVRGSLT 694 Query: 431 LEEVINYASHRFSNNR 446 + ++I+ + Sbjct: 695 VNDLISEFKQLVKEFK 710 >gi|309811510|ref|ZP_07705292.1| proline--tRNA ligase [Dermacoccus sp. Ellin185] gi|308434561|gb|EFP58411.1| proline--tRNA ligase [Dermacoccus sp. Ellin185] Length = 587 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 106/283 (37%), Positives = 156/283 (55%), Gaps = 1/283 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ HKL++R G I + + G+Y+WLPLG K L NV I+REE Sbjct: 4 RMSNLFLRTLREDPADAELPGHKLLVRAGYIRRAAPGVYTWLPLGLKVLRNVETIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA E+S P L + + + R+D YG + RL DR M+ GPTHEE+ T + Sbjct: 64 EAIGAQELSFPALLPREPYEATNRWDEYGPNLFRLQDRKGVDMLLGPTHEEMFTITVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T +QIQ K+RDE RPR G++R REF+MKD+YSFD T +G + SY K +Y Sbjct: 124 FSSYKDLPTTLFQIQTKYRDEARPRAGLLRGREFIMKDSYSFDHTKQGLEESYAKHRGAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++IF RLG + + + A+SG +GG S EF+ ++ GE S + + + Sbjct: 184 VKIFDRLGFEYVVVHADSGAMGGSASEEFLAVSRHGEDTFVRSPGGFAANVEAVVVPQAE 243 Query: 242 IISLNSIVEQ-WTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 + ++ P T + L + P + + Sbjct: 244 PVEVSVGPAHIEDTPETPTIETLVAALNANHPRDDGREWTAAD 286 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 62/173 (35%), Positives = 90/173 (52%), Gaps = 3/173 (1%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 ARGIE+GHIF GTKY+ + +GK V MGSYGIG R VAA+ E Sbjct: 415 GSGPLTLARGIEMGHIFQLGTKYAEALGLKVLDENGKLVTVTMGSYGIGVSRAVAAIAED 474 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGS 390 + D KG+IWP +APF + ++ D + E++ A L G V +DD G Sbjct: 475 NLDDKGLIWPRHIAPFDVHVVATG-KDAAVFEKAEQVVADLESAGLGVLFDDRPKVSPGV 533 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 +F A+L+G P V++G + +SD +E+K R +G D+ ++EV Sbjct: 534 KFKDAELIGVPTIVVLG-RGLSDGTIEVKDRRSGTSRDVGVDEVAAEVLSEVR 585 >gi|190406293|gb|EDV09560.1| threonyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a] gi|259147177|emb|CAY80430.1| Ths1p [Saccharomyces cerevisiae EC1118] gi|323333154|gb|EGA74554.1| Ths1p [Saccharomyces cerevisiae AWRI796] gi|323354584|gb|EGA86420.1| Ths1p [Saccharomyces cerevisiae VL3] Length = 734 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 75/440 (17%), Positives = 156/440 (35%), Gaps = 40/440 (9%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + + RD + L + ++ S G WLP G + + + ++R E + G E+ Sbjct: 324 EASMRDHRKIGKEQELF--LFNEMSPGSCFWLPHGTRIYNTLVDLLRTEYRKRGYEEVIT 381 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + ++ LW SG + +Y + M + P + +F+S +SYR LP+ Sbjct: 382 PNMYNSKLWETSGHWANYKENMFTFEVEKET-FGLKPMNCPGHCLMFKSRERSYRELPWR 440 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + R+E G+ R R F DA+ F + Sbjct: 441 VADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCT-----HDQIESEIENIFNFLQ---- 491 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 I G EF + T + + D + I Sbjct: 492 ----------YIYGVFGFEFKMELSTRPEKYVGKIETWDAAESKLESALKKWGGNWEINA 541 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D+ + D+L + + ++ F ++ L + + ++ + Sbjct: 542 GDGAFYGPKIDIM---ISDALRRWHQCATIQLD----FQLPNRFELEFKSKDQDSESYER 594 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V + +G++ + A++ + WP ++P ++ ++ + Q E + Sbjct: 595 PVMIHRAILGSVERMTAILT---EHFAGKWPFWLSPRQVLVVPVGVKYQG---YAEDVRN 648 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE--- 427 +L G D G + + +L + IVG + +++ V I++R ++ Sbjct: 649 KLHDAGFYADVDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMNEKSVNIRNRDVMEQQGKN 708 Query: 428 -DMSLEEVINYASHRFSNNR 446 +S+EEV+ + R Sbjct: 709 ATVSVEEVLKQLRNLKDEKR 728 >gi|323464624|gb|ADX76777.1| prolyl-tRNA synthetase [Staphylococcus pseudintermedius ED99] Length = 567 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 110/237 (46%), Positives = 160/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L+E P +AE SH+L+L+ G+I Q++ G+YS+LP+ + + ++ IIR+E Sbjct: 1 MKQSKVFIPTLREVPAEAEAISHQLLLKAGLIKQNAAGVYSYLPVATRVIHKISDIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R A+E+ +P LQ ++LW ESGR+D+YG E++RL DRN + GPTHEEV+T + R Sbjct: 61 MERIDAVEVVMPVLQQSELWKESGRWDAYGMELMRLRDRNQREFALGPTHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF E +Y M+ + Sbjct: 121 ELRSYKQLPLTLFQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHTDEESLMETYQNMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF R+GL P+ A+SG IGG+ +HEF L+ GE + S + D+ E Sbjct: 181 YSTIFKRVGLNVRPVVADSGAIGGNHTHEFHALSAIGEDTIVYSDN-SDYAANIEKA 236 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 66/164 (40%), Positives = 97/164 (59%), Gaps = 4/164 (2%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIEVG +F G KYS M AT G++ + MG YGIG R ++A+IE HD GIIW Sbjct: 405 GIEVGQVFVLGEKYSEAMKATVLNQQGREQNLTMGCYGIGVSRTLSAIIEQHHDDNGIIW 464 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG-CDVFWDDMGEQIGSQFAVADLLG 399 P SV PF + LI++ R +++Y +L +G DV +DD E+ G +F ADL+G Sbjct: 465 PKSVTPFDVHLISVNPKKDEQRACADRLYDQL--LGTYDVLYDDRNERAGVKFNDADLIG 522 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 P++V+VG K S+ VE+K R TG ED+ + +++ + + Sbjct: 523 IPVRVVVG-KNASEGIVEVKRRDTGDSEDVHVNDLVTHLEKLYE 565 >gi|256273733|gb|EEU08659.1| Ths1p [Saccharomyces cerevisiae JAY291] Length = 734 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 75/440 (17%), Positives = 156/440 (35%), Gaps = 40/440 (9%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + + RD + L + ++ S G WLP G + + + ++R E + G E+ Sbjct: 324 EASMRDHRKIGKEQELF--LFNEMSPGSCFWLPHGTRIYNTLVDLLRTEYRKRGYEEVIT 381 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + ++ LW SG + +Y + M + P + +F+S +SYR LP+ Sbjct: 382 PNMYNSKLWETSGHWANYKENMFTFEVEKET-FGLKPMNCPGHCLMFKSRERSYRELPWR 440 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + R+E G+ R R F DA+ F + Sbjct: 441 VADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCT-----HDQIESEIENIFNFLQ---- 491 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 I G EF + T + + D + I Sbjct: 492 ----------YIYGVFGFEFKMELSTRPEKYVGKIETWDAAESKLESALKKWGGNWEINA 541 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D+ + D+L + + ++ F ++ L + + ++ + Sbjct: 542 GDGAFYGPKIDIM---ISDALRRWHQCATIQLD----FQLPNRFELEFKSKDQDSESYER 594 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V + +G++ + A++ + WP ++P ++ ++ + Q E + Sbjct: 595 PVMIHRAILGSVERMTAILT---EHFAGKWPFWLSPRQVLVVPVGVKYQG---YAEDVRN 648 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE--- 427 +L G D G + + +L + IVG + +++ V I++R ++ Sbjct: 649 KLHDAGFYADVDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMNEKSVNIRNRDVMEQQGKN 708 Query: 428 -DMSLEEVINYASHRFSNNR 446 +S+EEV+ + R Sbjct: 709 ATVSVEEVLKQLRNLKDEKR 728 >gi|4619|emb|CAA26666.1| unnamed protein product [Saccharomyces cerevisiae] Length = 734 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 75/440 (17%), Positives = 156/440 (35%), Gaps = 40/440 (9%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + + RD + L + ++ S G WLP G + + + ++R E + G E+ Sbjct: 324 EASMRDHRKIGKEQELF--LFNEMSPGSCFWLPHGTRIYNTLVDLLRTEYRKRGYEEVIT 381 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + ++ LW SG + +Y + M + P + +F+S +SYR LP+ Sbjct: 382 PNMYNSKLWETSGHWANYKENMFTFEVEKET-FGLKPMNCPGHCLMFKSRERSYRELPWR 440 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + R+E G+ R R F DA+ F + Sbjct: 441 VADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCT-----HDQIESEIENIFNFLQ---- 491 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 I G EF + T + + D + I Sbjct: 492 ----------YIYGVFGFEFEMELSTRPEKYVGKIETWDAAESKLESALKKWGGNWEINA 541 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D+ + D+L + + ++ F ++ L + + ++ + Sbjct: 542 GDGAFYGPKIDIM---ISDALRRWHQCATIQLD----FQLPNRFELEFKSKDQDSESYER 594 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V + +G++ + A++ + WP ++P ++ ++ + Q E + Sbjct: 595 PVMIHRAILGSVERMTAILT---EHFAGKWPFWLSPRQVLVVPVGVKYQG---YAEDVRN 648 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE--- 427 +L G D G + + +L + IVG + +++ V I++R ++ Sbjct: 649 KLHDAGFYADVDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMNEKSVNIRNRDVMEQQGKN 708 Query: 428 -DMSLEEVINYASHRFSNNR 446 +S+EEV+ + R Sbjct: 709 ATVSVEEVLKQLRNLKDEKR 728 >gi|151943085|gb|EDN61420.1| threonyl-tRNA synthetase [Saccharomyces cerevisiae YJM789] Length = 734 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 75/440 (17%), Positives = 156/440 (35%), Gaps = 40/440 (9%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + + RD + L + ++ S G WLP G + + + ++R E + G E+ Sbjct: 324 EASMRDHRKIGKEQELF--LFNEMSPGSCFWLPHGTRIYNTLVDLLRTEYRKRGYEEVIT 381 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + ++ LW SG + +Y + M + P + +F+S +SYR LP+ Sbjct: 382 PNMYNSKLWETSGHWANYKENMFTFEVEKET-FGLKPMNCPGHCLMFKSRERSYRELPWR 440 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + R+E G+ R R F DA+ F + Sbjct: 441 VADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCT-----HDQIESEIENIFNFLQ---- 491 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 I G EF + T + + D + I Sbjct: 492 ----------YIYGVFGFEFKMELSTRPEKYVGKIETWDAAESKLESALKKWGGNWEINA 541 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D+ + D+L + + ++ F ++ L + + ++ + Sbjct: 542 GDGAFYGPKIDIM---ISDALRRWHQCATIQLD----FQLPNRFELEFKSKDQDSESYER 594 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V + +G++ + A++ + WP ++P ++ ++ + Q E + Sbjct: 595 PVMIHRAILGSVERMTAILT---EHFAGKWPFWLSPRQVLVVPVGVKYQG---YAEDVRN 648 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE--- 427 +L G D G + + +L + IVG + +++ V I++R ++ Sbjct: 649 KLHDAGFYADVDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMNEKSVNIRNRDVMEQQGKN 708 Query: 428 -DMSLEEVINYASHRFSNNR 446 +S+EEV+ + R Sbjct: 709 ATVSVEEVLKQLRNLKDEKR 728 >gi|14318437|ref|NP_116578.1| Ths1p [Saccharomyces cerevisiae S288c] gi|730881|sp|P04801|SYTC_YEAST RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|556869|emb|CAA86092.1| threonyl-tRNA synthetase [Saccharomyces cerevisiae] gi|285812573|tpg|DAA08472.1| TPA: Ths1p [Saccharomyces cerevisiae S288c] Length = 734 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 75/440 (17%), Positives = 156/440 (35%), Gaps = 40/440 (9%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + + RD + L + ++ S G WLP G + + + ++R E + G E+ Sbjct: 324 EASMRDHRKIGKEQELF--LFNEMSPGSCFWLPHGTRIYNTLVDLLRTEYRKRGYEEVIT 381 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + ++ LW SG + +Y + M + P + +F+S +SYR LP+ Sbjct: 382 PNMYNSKLWETSGHWANYKENMFTFEVEKET-FGLKPMNCPGHCLMFKSRERSYRELPWR 440 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + R+E G+ R R F DA+ F + Sbjct: 441 VADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCT-----HDQIESEIENIFNFLQ---- 491 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 I G EF + T + + D + I Sbjct: 492 ----------YIYGVFGFEFKMELSTRPEKYVGKIETWDAAESKLESALKKWGGNWEINA 541 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D+ + D+L + + ++ F ++ L + + ++ + Sbjct: 542 GDGAFYGPKIDIM---ISDALRRWHQCATIQLD----FQLPNRFELEFKSKDQDSESYER 594 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V + +G++ + A++ + WP ++P ++ ++ + Q E + Sbjct: 595 PVMIHRAILGSVERMTAILT---EHFAGKWPFWLSPRQVLVVPVGVKYQG---YAEDVRN 648 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE--- 427 +L G D G + + +L + IVG + +++ V I++R ++ Sbjct: 649 KLHDAGFYADVDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMNEKSVNIRNRDVMEQQGKN 708 Query: 428 -DMSLEEVINYASHRFSNNR 446 +S+EEV+ + R Sbjct: 709 ATVSVEEVLKQLRNLKDEKR 728 >gi|189485254|ref|YP_001956195.1| threonyl-tRNA synthetase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287213|dbj|BAG13734.1| threonyl-tRNA synthetase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 598 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 74/439 (16%), Positives = 147/439 (33%), Gaps = 39/439 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y I + + RD L L + I + G+ W P G D + ++ Sbjct: 189 YLTGIEEAHKRDHRKLGEDLDLFS--IDETVGGGLVLWHPKGALLKDIIENYWKKFHLEN 246 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G +S P + S +L+ SG +Y + M + K P + + I+++ + S Sbjct: 247 GYDLLSTPHIASEELFKVSGHLQTYSENMYASMEIEGKPYRIKPMNCPMHLMIYKTKLHS 306 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + ++ +R E G++R R F D + + + +F + Sbjct: 307 YRELPVRYAELGTVYRFEKSGVLHGLLRVRGFTQDDGHIIVAPEQLEEEM-LGVFNMAVN 365 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 G + + P E + ++ + S Sbjct: 366 CLKTFGFNEYKIYFATRP----------------EKKYVGEIEYWEKAQNSIENALKKTG 409 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + I E A Y D+ K+ D + + S + F ++ + Sbjct: 410 CVYEIDEGGGAFYGPKIDI---KIKDVIGRLWQCSTLQFD----FNLPERFD----IFYV 458 Query: 304 GADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + GK + +G++ V+ + G +W + + ++ R Sbjct: 459 NSSGKKARPYMIHRALLGSLERFIGVLLEHYAGALPLW------LSPIQVAVANINEEQR 512 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 CE + L K V +D E+IG + + P ++G+K V ++ R Sbjct: 513 GFCEGLSQELKKNNIRVIFDGRNEKIGRKIRENAMQKIPYIAVIGNKEKDACAVAVRARG 572 Query: 423 TGIREDMSLEEVINYASHR 441 MS++ I++ Sbjct: 573 NRDLGVMSVDNFISFVKEE 591 >gi|18311410|ref|NP_563344.1| prolyl-tRNA synthetase [Clostridium perfringens str. 13] gi|168206822|ref|ZP_02632827.1| prolyl-tRNA synthetase [Clostridium perfringens E str. JGS1987] gi|168214717|ref|ZP_02640342.1| prolyl-tRNA synthetase [Clostridium perfringens CPE str. F4969] gi|168217921|ref|ZP_02643546.1| prolyl-tRNA synthetase [Clostridium perfringens NCTC 8239] gi|182626988|ref|ZP_02954718.1| prolyl-tRNA synthetase [Clostridium perfringens D str. JGS1721] gi|81849146|sp|Q8XHQ4|SYP_CLOPE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|18146094|dbj|BAB82134.1| proline-tRNA ligase [Clostridium perfringens str. 13] gi|170661763|gb|EDT14446.1| prolyl-tRNA synthetase [Clostridium perfringens E str. JGS1987] gi|170713833|gb|EDT26015.1| prolyl-tRNA synthetase [Clostridium perfringens CPE str. F4969] gi|177907658|gb|EDT70282.1| prolyl-tRNA synthetase [Clostridium perfringens D str. JGS1721] gi|182380028|gb|EDT77507.1| prolyl-tRNA synthetase [Clostridium perfringens NCTC 8239] Length = 570 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 129/293 (44%), Positives = 169/293 (57%), Gaps = 6/293 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+E P +AEI SHKLMLR G++ + + GIY+++PLG K ++NV I+REE Sbjct: 1 MKMSNMLVGTLREVPAEAEIESHKLMLRAGLMRKMAAGIYNYMPLGLKVIENVKNIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E L A+LW ESGR+D+YG EM RL DR+++ GPTHEEV TDI R+ Sbjct: 61 MNNAGAQEFLASALIPAELWQESGRWDAYGAEMFRLKDRHNRDFCLGPTHEEVFTDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFGVMRSREF+MKD YSFD EG +Y KM + Sbjct: 121 EIKSYKQLPLNLYQIQTKYRDERRPRFGVMRSREFIMKDGYSFDKDQEGLDLAYEKMRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ IF+R GL + + A+SG IGG S EF+V ++ GE V D+ E Sbjct: 181 YVNIFNRCGLDAKAVAADSGAIGGSGSAEFMVKSEVGEDDVVFCTAC-DYAANIEKAP-- 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 S E+ + K + L + S + I IF K Sbjct: 238 ---STPEHGEKEELMEVEKVETPAVKSIEDLAKFFECSPKKIAKTLIFQADDK 287 Score = 166 bits (421), Expect = 6e-39, Method: Composition-based stats. Identities = 75/191 (39%), Positives = 103/191 (53%), Gaps = 3/191 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 D N + + PE + +RG EVGHIF GTKYS M ATF DGK Sbjct: 375 FEGIVGDFRNVTIGEKCPECGKEITISRGTEVGHIFKLGTKYSESMGATFIDEDGKAKPF 434 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R VA++IE +D GIIWP VAP+ +S+I ++ E+IY L Sbjct: 435 IMGCYGIGVTRTVASIIEQHNDENGIIWPLEVAPYHVSVIPANVKNEEQATKAEEIYNEL 494 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 K+G + DD E+ G +F ++L+G P+++ VG K + + +VE K R G E +S+E Sbjct: 495 RKMGVEALLDDRKERAGVKFKDSELMGIPMRITVG-KMIGEGQVEFKLRNGGEVETLSIE 553 Query: 433 EVINYASHRFS 443 EV N F Sbjct: 554 EVYNRVREEFE 564 >gi|2191162|gb|AAB61048.1| Similar to threonyl-tRNA synthetase; coded for by A. thaliana cDNA R65376 [Arabidopsis thaliana] Length = 702 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 79/455 (17%), Positives = 158/455 (34%), Gaps = 52/455 (11%) Query: 2 RRSKYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ K +L L+E + D + K L HQ S G Y +LPLG + + + I+ + Sbjct: 280 KQLKKYLQFLEEAKKYDHRLLGQKQELF--FSHQLSPGSYFFLPLGTRVYNRLMDFIKNQ 337 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E+ P + + +LW SG D+Y M + + P + IF+ Sbjct: 338 YWHRGYTEVITPNMYNMELWQTSGHADNYKDNMFTF-NIEKQEFGLKPMNCPGHCLIFQH 396 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 ++SYR LP + R+E G+ R R F DA+ F T + + Sbjct: 397 RVRSYRELPMRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTTEQVKGE-VQGVLE 455 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G ++ + P + + D Sbjct: 456 FIDYVYKVFGFTY-ELKLSTRP-----------------EKYLGDLETWDKAEADLKEAI 497 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + E A Y D+ + D++ + + ++ F +++L + Sbjct: 498 EAFGKPLVLNEGDGAFYGPKIDI---TVSDAMNRKFQCATLQLD----FQLPIRFNLEYA 550 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A K V + +G++ + A++ + WP ++P + + I Q Sbjct: 551 AE--DEAKKSRPVMIHRAVLGSVERMFAILL---EHYKGKWPFWISPRQAIVCPISEKSQ 605 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ-------------FAVADLLGFPLQVIV 406 EK+ ++ G V D +I + A L + ++V Sbjct: 606 ---QYAEKVQKQIKDAGFYVDADLTDRKIDKKVNDFGSCSKFCSVVREAQLAQYNYILVV 662 Query: 407 GSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 G + +V ++ R S+E+++ + Sbjct: 663 GETEAATGQVSVRVRDNAAHSVKSIEDLLEEFKAK 697 >gi|309389227|gb|ADO77107.1| prolyl-tRNA synthetase [Halanaerobium praevalens DSM 2228] Length = 568 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 108/254 (42%), Positives = 163/254 (64%), Gaps = 1/254 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK +LP L+E+P +A++ SH+LMLR GM+ +H+ GIYS+LPLG K + + I R+ Sbjct: 1 MRMSKLYLPTLKEDPAEADVISHQLMLRAGMMRKHASGIYSYLPLGYKVIKKIEKIARKH 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + + A E+ +P +Q + +W +S R+D +G M++ DR ++ GPTHEEV+TD+ R Sbjct: 61 MDNSEAQEVLLPIMQDSQIWKDSKRWDKFGPLMIKFNDRKNREFCLGPTHEEVVTDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY++LP YQIQ K RDE+RPRFGVMR REF+MKDAYS D+ G SY M+ + Sbjct: 121 EVRSYKDLPLNLYQIQTKVRDEIRPRFGVMRGREFIMKDAYSLDIDSAGLDKSYQAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF GL+++ + A++G +GG SHEF+VLAD+GE ++ D ++ E Sbjct: 181 YEKIFAECGLEAVSVEADTGAMGGKDSHEFMVLADSGEDEIAFCNDC-NYAANVERATSQ 239 Query: 241 DIISLNSIVEQWTA 254 + I + Sbjct: 240 KVGIDFEIESDFEK 253 Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats. Identities = 67/213 (31%), Positives = 109/213 (51%), Gaps = 1/213 (0%) Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 I N + ++ + +A V + + + K GIEVGHIF Sbjct: 354 AIVGANEEDYHFKNVKVKRDFEVEAFADLRSVKSGERCPKCEKGKLDIKAGIEVGHIFKL 413 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 GTKYS M A + +GK + MGSYGIG R+VAA IE ++D GI WP ++AP++I Sbjct: 414 GTKYSENMDANYLDENGKAQPIVMGSYGIGITRLVAAAIEQNNDQYGIKWPKAIAPYQII 473 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 ++ + +D + E IY L G +V DD E+ G +F ++L+G PL++ +GS+ Sbjct: 474 ILPLG-NDDEVQTKSEAIYQDLKAKGWEVLIDDRKERAGVKFNDSELIGIPLRLTIGSRS 532 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 + + VE R ++ ++ LE++ F+ Sbjct: 533 LKNGVVEAMTRENNMKTEIELEQLETKIEALFA 565 >gi|313887818|ref|ZP_07821498.1| proline--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846161|gb|EFR33542.1| proline--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b] Length = 567 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 116/298 (38%), Positives = 177/298 (59%), Gaps = 6/298 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++P L+E+P+DAEIASHK +LR GMI + + G+Y++LPLG +++ + I+R+E Sbjct: 1 MRLSKLYMPTLREDPQDAEIASHKFLLRAGMIRKSASGVYTYLPLGYRSIRKIENIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+E+ + +Q A++W ESGR++ +G EM +L DRND+ GPT EE T + R Sbjct: 61 MDKAGAMEILMSAIQPAEIWKESGRWEKFGPEMFKLRDRNDREFCLGPTAEEYFTTLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP YQIQ K+RDE RPRFG+ R+REF MKDAY+FD +PE +Y M+ + Sbjct: 121 EVKSYKDLPLNLYQIQTKYRDEKRPRFGINRAREFSMKDAYTFDTSPETLHTAYMNMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF RL L + ++G +GG SHEFI L++TGE + S+ F E + Sbjct: 181 YEKIFDRLELDYKIVEGDNGAMGGTGSHEFIALSETGEGVIVYSESG-KFGATEEKAPVE 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS-----ARGIEVGHIFYFGTK 293 I+ + + + E + K+ + G E +F G + Sbjct: 240 YILPQAEDKKDLEKVHTPNASTIEEVANFLKVDQKKCAKAIDLMLGDEPALVFIPGDR 297 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 72/191 (37%), Positives = 96/191 (50%), Gaps = 3/191 (1%) Query: 258 ATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 D+ D +P V RGIEVG+IF GTKYS ++AT+ +GK +Y MG Sbjct: 378 VVDDLLLVAEGDKVPGTDEVYKFARGIEVGNIFKLGTKYSEALNATYLDENGKANYFYMG 437 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R V AVIE +HD GIIWP SVAP++ + + D+ EKIY L Sbjct: 438 SYGVGVTRSVTAVIEQNHDDNGIIWPISVAPYEAIVTIVNTKDEEQVALGEKIYKELEAK 497 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G +F DL+G PL++ G K VE R ++S +E I Sbjct: 498 GVEVLLDDRKERPGVKFKDRDLIGIPLRITCGKKSGES-IVEYSTRREMENSEISADEAI 556 Query: 436 NYASHRFSNNR 446 R Sbjct: 557 KNILSEVEKVR 567 >gi|269217138|ref|ZP_06160992.1| proline--tRNA ligase [Slackia exigua ATCC 700122] gi|269129275|gb|EEZ60360.1| proline--tRNA ligase [Slackia exigua ATCC 700122] Length = 569 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 111/233 (47%), Positives = 164/233 (70%), Gaps = 1/233 (0%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+ ++P ++E+P DA++ S KL+ R GM+ + + G+YS+LPLG + L+ + +IIREE + Sbjct: 1 MSELYMPTIKEDPADADVTSAKLLYRAGMLRKEASGLYSFLPLGMRVLNKLESIIREEMD 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+ +P +QS+DLW ESGR+ +YG+EMLR+ADR+ GPTHEEV+TD+ ++ + Sbjct: 61 SHGAQEILMPFVQSSDLWRESGRWGAYGEEMLRMADRHGNEFCLGPTHEEVVTDLVKNEL 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 +SY++LP YQIQLKFRDE RPRFG++RSREF+MKDAYSFD EG SY +M +Y Sbjct: 121 RSYKDLPRNLYQIQLKFRDERRPRFGLLRSREFIMKDAYSFDADREGLDASYERMREAYE 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGD-LSHEFIVLADTGETQVFCSKDFMDFPIPS 234 + R+GL+ + A++G IGGD + EF+VLAD GE ++ + + Sbjct: 181 NVCDRMGLEYRVVVADAGQIGGDGGTEEFMVLADNGEAELVYCDCGYAADVEA 233 Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats. Identities = 72/188 (38%), Positives = 107/188 (56%), Gaps = 2/188 (1%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 A D+ + D+ P+ SARGIEVG IF G KYS M ATF ADG + MG Sbjct: 382 AWGDLCTVREGDACPQCGSPLRSARGIEVGQIFKLGDKYSRAMGATFMDADGSEKPFIMG 441 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R +AA +E +D GIIWP ++AP +++I + A E++ L+ Sbjct: 442 CYGIGVSRAMAAAVEQRNDEHGIIWPAAIAPAHVAVIPLSPKPDEVTAAAEELAGALADA 501 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G +F DL+G+P+QV+VG + + + VE+K R TG +E ++L++V+ Sbjct: 502 GLEVVIDDRDERAGVKFNDNDLIGWPVQVVVGKRGLKEGVVEVKDRATGEKESVALDQVL 561 Query: 436 NYASHRFS 443 + S Sbjct: 562 SAVERVLS 569 >gi|290961808|ref|YP_003492990.1| threonine-tRNA synthetase [Streptomyces scabiei 87.22] gi|260651334|emb|CBG74456.1| threonine-tRNA synthetase [Streptomyces scabiei 87.22] Length = 658 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 70/440 (15%), Positives = 140/440 (31%), Gaps = 38/440 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD ++L L + + Q G+ + P G + R G + Sbjct: 254 EAEKRDHRKLGNELDLFS-IPDQIGSGLAVFHPKGGIIRRVMEDYSRRRHEEEGYEFVYT 312 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P L+ SG D Y M P + + IF + +SYR LP Sbjct: 313 PHATKGKLFETSGHLDWYADGMYPPMQLDEGVDYYLKPMNCPMHNLIFDARGRSYRELPL 372 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 ++ +R E G+ R+R F DA+ + + ++ +K L + G Sbjct: 373 RLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTKEQMAEEL-DKTLTFVLNLLRDYG 431 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 L + + + S + + + + L Sbjct: 432 LTDFYLELST----------------KDPEKFVGSDEIWEESTETLRQVAEKQGLLLVPD 475 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y + ++ D++ ++S ++ F ++ + G DG Sbjct: 476 PGGAAFYGPKI---SVQVKDAIGRTWQMSTVQLD----FNLPERFD----LEYTGPDGSK 524 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + G++ AV+ + +P +AP + I I + +K Sbjct: 525 QRPVMIHRALFGSIERFFAVLL---EHYAGAFPAWLAPVQAVGIPIG---DAHVEYLQKF 578 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 A + G V D +++ + A P VI G + ++ V ++R Sbjct: 579 AAEAKRKGLRVDVDASSDRMQKKIRNAQKAKVPFMVIAGDEDMAAGAVSFRYRDGSQENG 638 Query: 429 MSLEEVINYASHRFSNNRPV 448 + +EE I + + + Sbjct: 639 IPVEEAIAKIAKVVEDRVQI 658 >gi|297155818|gb|ADI05530.1| threonyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1] Length = 659 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 72/447 (16%), Positives = 140/447 (31%), Gaps = 37/447 (8%) Query: 5 KYFLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L L + RD +L L + + G+ + P G + A R+ Sbjct: 247 KAYLDFLVEAEKRDHRKLGSELDLFS-FPDELGSGLAVFHPKGGIIRREMEAYSRKRHEE 305 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 +G ++ P + A L+ SG Y + M + + + + IFR+ + Sbjct: 306 SGYEFVNTPHITKAKLFETSGHLPHYMEGMFPPMEFEGQDYYLKAMNCPMHNLIFRARGR 365 Query: 124 SYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ +R E G+ R+R F D++ + + + + L Sbjct: 366 SYRELPLRLFEFGTVYRYEKSGVVHGLTRTRGFTQDDSHIYCTREQAPDEL-DSLLTFVL 424 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + GL + + D S +FI + + Sbjct: 425 DLLRDYGLNDFYLELST----RDDSDKFIGSDEQ-----------WAEATDMLRQAAEKQ 469 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + + D++ ++S ++ F + Sbjct: 470 GLELVMDPGGAAYYGPKI---SVQAKDAIGRTWQMSTIQVDFNQPARF--------ELEY 518 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 ADG + G++ AV+ + +P +AP + I I Sbjct: 519 TAADGSRQQPIMLHRALFGSIERFFAVLL---EHYAGAFPVWLAPVQAVGIPIGDSH--- 572 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+ A G V D +++ + A P +I G ++ V ++R Sbjct: 573 VPYLEEFAAEAKAKGLRVEVDSSSDRMQKKIRNAQRAKIPFMIIAGDDDMAAGAVSFRYR 632 Query: 422 LTGIREDMSLEEVINYASHRFSNNRPV 448 + + E I V Sbjct: 633 DGSQKNGIPRYEAIAEILDAVQRRIQV 659 >gi|332295560|ref|YP_004437483.1| Prolyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796] gi|332178663|gb|AEE14352.1| Prolyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796] Length = 572 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 107/241 (44%), Positives = 148/241 (61%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK F L+E P DAE SH L+LR G I + S GIY++LPL ++ L + I+REE Sbjct: 1 MKLSKLFFKTLKEVPGDAEAISHVLLLRAGYIRRLSSGIYTYLPLAKRVLLKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + E+ +P LQ ++W SGR+ YG E++R DR+DK GPTHEEV+TD+ Sbjct: 61 MININSQELLLPALQPREIWEISGRWKKYGLELMRFKDRHDKDYALGPTHEEVITDLINR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP + +QIQ KFRDE+RPRFG+MR+REF+MKDAYSF E +Y MF + Sbjct: 121 EVNSYKQLPISVFQIQTKFRDEIRPRFGLMRTREFIMKDAYSFHRNEEDLDKTYWDMFHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG +SHEF+VL GE ++ + T Sbjct: 181 YEKILTRMGLNFKSVEADSGAIGGSVSHEFMVLTPFGEDKILYCSSCSYAANLEKATSTY 240 Query: 241 D 241 + Sbjct: 241 E 241 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 105/208 (50%), Gaps = 3/208 (1%) Query: 239 FDDIISLNSIVEQWTAPYAATS-DVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYS 295 + V Y D+ K + + + + G E GH+F GTKYS Sbjct: 362 ANKEGYHYKNVYFKRDFYTDKIFDLRISKAGEFCSRCGSRLLESTGSEAGHVFKLGTKYS 421 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 PM A FK DGK+ +MG YGIG R++A V+E HD GIIWP+S++P+++ +I Sbjct: 422 EPMKAYFKDEDGKEKPFEMGCYGIGISRLLAIVVEQHHDEFGIIWPNSISPYQVIIIPTN 481 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 +D+ E I+ L + G V +DD E+ G +F ADLLG P+++I+GS F Sbjct: 482 INDKNQLTTSEMIFYELKERGISVLFDDRDERAGVKFKDADLLGIPIKIIIGSHFSKSGL 541 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRFS 443 VEIK R G + +E Y S + Sbjct: 542 VEIKVRRDGSSNLVPPDEASVYVSLKLR 569 >gi|300933077|ref|ZP_07148333.1| prolyl-tRNA synthetase [Corynebacterium resistens DSM 45100] Length = 592 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 105/282 (37%), Positives = 154/282 (54%), Gaps = 5/282 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+++P DAE+ SHKL++R G I + + G+YSWLPLG + L V ++R E Sbjct: 4 RMSTLFLRTLRDDPADAEVPSHKLLVRAGYIRRAAPGVYSWLPLGLRVLRKVENVVRNEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+S P L + + +GR+ YG +LRL DR + GPTHEE+ T + + Sbjct: 64 DAIGAQELSFPALLPREPYETTGRWTEYGDALLRLKDRKGADYLLGPTHEEMFTSVVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSFD+ EG + SY+K +Y Sbjct: 124 YNSYKDFPVTLYQIQNKYRDEERPRAGILRGREFIMKDSYSFDMDDEGLERSYHKHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +IF LG++ A SG +GG S EF+ +A+ GE F D+ E Sbjct: 184 QKIFDTLGVQYAICAATSGAMGGSASEEFLAVAENGE-DTFVRSTGSDYAANVEAV---- 238 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 + P + N D+L + + ++ Sbjct: 239 VTQAPDPRPIDGQPALEVRESPNTTTIDALVKWANEAGITVD 280 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 66/186 (35%), Positives = 99/186 (53%), Gaps = 5/186 (2%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 + K D P+ K ARGIE+GHIF G KY+ +GK MGSY Sbjct: 407 IEAAEVKEGDPSPDGKGALTLARGIEIGHIFQLGRKYTEAFDVQILDENGKRAVPTMGSY 466 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+VA + E HD G+ WP +VAP+ + + I D +A EK+ LS G Sbjct: 467 GIGVSRLVAVLAEQMHDEYGLRWPVAVAPYDVH-VVIANKDAAAAEAAEKLTTELSSTGL 525 Query: 378 DVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD G +F ++LLG PL V+VG + ++ KVE+++RL+G + +++ E+ ++ Sbjct: 526 DVLIDDRPKVSPGVKFKDSELLGMPLVVVVG-RGFAEGKVELRNRLSGDKLEVAYEDAVS 584 Query: 437 YASHRF 442 + Sbjct: 585 AVQQQL 590 >gi|159037395|ref|YP_001536648.1| threonyl-tRNA synthetase [Salinispora arenicola CNS-205] gi|157916230|gb|ABV97657.1| threonyl-tRNA synthetase [Salinispora arenicola CNS-205] Length = 671 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 69/444 (15%), Positives = 132/444 (29%), Gaps = 35/444 (7%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E R D L L + + G+ + P G + +R Sbjct: 250 KAYLRLLEEAARRDHRKLGTDLDLFS-FPEEIGSGLPVFHPKGGVLKRTMEDYVRARHIE 308 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + L+ SG Y M + + I+RS + Sbjct: 309 EGFDYVGTPHISKEGLFHTSGHLPYYADGMFPPMHLEGADYYLKAMNCPMHNLIYRSRGR 368 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ +RDE G+ R R F D++S+ + + L Sbjct: 369 SYRELPMRLFEFGSVYRDEKSGVIHGLTRVRGFTQDDSHSYCTKEQAPAE-IKHLLAFVL 427 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + G+ + + D + S + D Sbjct: 428 GLLQDFGITDFVLELSTRD-------------DANPDKFVGSAEDWATATAVLEQCARDT 474 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + + D++ ++S + FG + Sbjct: 475 GLDLVPDPGGAAFYGPKI---SVQAKDAIGRTWQMSTIQYDFNQPAGFG--------LEY 523 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + ADG + G++ V+ + G W V I + + Sbjct: 524 QAADGSRQRPVMIHCAKFGSIERFIGVLTEHYAGAFPAWLAPVQVVGIPI------REDH 577 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + A L G D +++ + A P I G V+ V ++R Sbjct: 578 TEYLDGFVAGLRAAGIRAQVDAGDDRMQKKIRTAQQQKIPFMAIAGDDDVAAGTVSFRYR 637 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 R + + E +++ ++ Sbjct: 638 DGSQRNGVPVAEAVSHVLDVVNSR 661 >gi|222823074|ref|YP_002574647.1| threonyl-tRNA synthetase [Campylobacter lari RM2100] gi|254783514|sp|B9KEB1|SYT_CAMLR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|222538295|gb|ACM63396.1| threonyl-tRNA synthetase [Campylobacter lari RM2100] Length = 603 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 157/443 (35%), Gaps = 41/443 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L I++E RD +++ L + G+ WL G K + ++ + G Sbjct: 198 YLKIIEEAKKRDHRKLGNEMKLFA-FDDEIGGGLPIWLSNGAKLRSKLEHLLYKAHRLRG 256 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P L AD W SG Y +Y + M +++ P + I++S ++SY Sbjct: 257 YEPVRGPELLKADAWKISGHYANYKENM-YFTQIDEQEYGIKPMNCVGHIKIYQSDVRSY 315 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F++ + R E G+ R REF DA+ F + P K ++ + Sbjct: 316 RDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCM-PSQIKEQVLEILSFVDTL 374 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G T + + D + D+ Sbjct: 375 MKAFGFDYEMEI------------------STRPAKAIGDDEIWDIATNALKQALDEQGL 416 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + ++ F +++ + Sbjct: 417 KYGIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVD----FNLPSRF----KLEYTD 465 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 AD + + +G+ ++ + + + I Q + Sbjct: 466 ADNEKKQPVMLHRAILGSFERFIGILIEHC------AGELPFFIAPTQVAIVPISQNHHE 519 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++I +L ++G D E + + A+ P+ +++G + V++ V ++ R Sbjct: 520 YAKEIAKKLLELGIDSEVYSKNESLNKKIRTAEKAHVPMILVLGDEEVANKSVALRDRRA 579 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 ++ ++L+E I + S R Sbjct: 580 KEQKTLTLDEFITLTKEKLSEVR 602 >gi|227524682|ref|ZP_03954731.1| threonine--tRNA ligase [Lactobacillus hilgardii ATCC 8290] gi|227088166|gb|EEI23478.1| threonine--tRNA ligase [Lactobacillus hilgardii ATCC 8290] Length = 658 Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 79/451 (17%), Positives = 162/451 (35%), Gaps = 39/451 (8%) Query: 2 RRSKY---FLPILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAII 57 ++S+ + + RD + ++L L + + G+ W+P G + I Sbjct: 236 KQSELDEDLKKRQEAHERDHRVIGNQLDLF--FVDPKVGAGLPYWMPNGATIRRTIERYI 293 Query: 58 REEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTD 116 +++ G + P L + DL+ +SG ++ Y ++M D D + + P + Sbjct: 294 VDKEVANGYEHVYTPVLANLDLYKQSGHWEHYREDMFPPMDMGDGEELELRPMNCPSHIQ 353 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 I+ HI+SYR LP ++ + R E G+ R RE + D ++F + + N Sbjct: 354 IYNHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIQEEFQN 413 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 + + + D T+ + D M S Sbjct: 414 ILKLMVEVYHDFDINDYTFR---------------LSYRDPENTEKYFDDDEMWNRAQSM 458 Query: 236 -NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY 294 D++ E A Y DV + +L + +S ++ F ++ Sbjct: 459 LKGAMDELGLDYVEAEGEAAFYGPKLDVQTKT---ALGNEETLSTIQLD----FMLPERF 511 Query: 295 SLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 L + G DGK H M G + + + + +P +AP ++ +I + Sbjct: 512 DLH----YVGEDGKQHRPVMIHR--GLVSTMERFVAYLTEIYKGAFPTWLAPHQVKIIPV 565 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 D ++I +L ++ D E++G A P ++VG + V+ Sbjct: 566 --SQDKHGDYAKQINDQLRRLKIRSSVDTRAEKMGYLIRDAQTHKIPYTLVVGDEEVNGK 623 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V ++ + SL+ ++ ++ Sbjct: 624 SVSVRRYGEKETQAESLDTFVDEIQKDIASY 654 >gi|225374732|ref|ZP_03751953.1| hypothetical protein ROSEINA2194_00352 [Roseburia inulinivorans DSM 16841] gi|225213424|gb|EEG95778.1| hypothetical protein ROSEINA2194_00352 [Roseburia inulinivorans DSM 16841] Length = 594 Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 74/434 (17%), Positives = 153/434 (35%), Gaps = 33/434 (7%) Query: 16 RDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD ++ L M +G+ +LP G + I+ ++ + G + + P + Sbjct: 184 RDHRKIGKEMNLF--MSDDLVGRGLPMFLPKGYTVWQELENYIKAKERKLGYLHVMTPCV 241 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQ 134 + +L+ SG +D Y M + ++ + P + I+ + + SY++LP + Sbjct: 242 GTVNLYKTSGHWDHYKDNMFPAMEVEGESFVLRPMNCPHHMMIYANRMHSYKDLPIRIGE 301 Query: 135 IQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSI 193 I FR E G+ R R F DA+ +TPE + ++++ + + Sbjct: 302 IAHDFRFEASGTLKGIERGRHFCQNDAH-LFVTPEQIESEFSQVVDLIFDTYKDFNITDY 360 Query: 194 PMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT 253 + + D E + + DD+ + Sbjct: 361 RCVLSLRDPADKVKY-----HDDDEM--------WNTAENALRKVLDDLGIDYTEEIGEA 407 Query: 254 APYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 A Y DV + ++ +S ++ F K+ + T+ DG Sbjct: 408 AFYGPKLDV---NVKPAIGNEYTLSTCQLD----FCLPEKF----NLTYIDKDGTKKTPV 456 Query: 314 M-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 + +G++ A I + P +AP + +I +K D+ ++ + L Sbjct: 457 VLHRAILGSLDRFMAYIL---EETKGNLPLWLAPVQARIIPVKNEDEELNAYSHELLSYL 513 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 + G V D+ E++G + A + P +I+G V D V + + E Sbjct: 514 DENGIRVEIDERAEKLGYRVRAAQVEKVPYLIILGKNEVKDGTVSYRLHGEQATTTVPKE 573 Query: 433 EVINYASHRFSNNR 446 E + + + Sbjct: 574 EFLAMLKDEIATKK 587 >gi|205373425|ref|ZP_03226229.1| prolyl-tRNA synthetase [Bacillus coahuilensis m4-4] Length = 494 Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 115/264 (43%), Positives = 165/264 (62%), Gaps = 3/264 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S F+P L+E P DAEI SH+L+LR G + Q++ GIYS+LPLG++ L V IIREE Sbjct: 1 MKQSMTFIPTLRETPADAEIKSHQLLLRAGFMKQNTSGIYSFLPLGKRVLAKVEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G +EM +P LQ A+LW ESGR+ +YG E++R+ DR+ + G THEEV+T + R Sbjct: 61 MENAGVVEMFMPALQQAELWQESGRWYTYGSELMRMKDRHGREFALGATHEEVITSLLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP + YQIQ K+RDE RPRFG++R REF+MKDAYSF + E +Y+++F + Sbjct: 121 DVKSYKKLPLSLYQIQTKYRDEARPRFGLLRGREFIMKDAYSFHASKESLDETYDRIFQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN---T 237 Y IF R GL + A+SG +GG +HEF+VL++ GE + S T Sbjct: 181 YSNIFERCGLNYRAVIADSGAMGGKDTHEFMVLSEVGEDTIAYSDTSSYAANIEMAPVVT 240 Query: 238 DFDDIISLNSIVEQWTAPYAATSD 261 ++ +E+ P T + Sbjct: 241 QYEMSSEEQLSIEKIATPGQKTIE 264 Score = 67.8 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 2/146 (1%) Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA- 279 + + + + ++ + ++ A D+ D P+ K V Sbjct: 341 KVIADHAVKYIVNGIAGANEEDVHYKNVNIDRDAKVERYEDLRFILEGDPSPDGKGVIKF 400 Query: 280 -RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 +GIEVGH+F GT+YS M+AT +GK ++ MG YGIG R +AAV E +D G+ Sbjct: 401 AKGIEVGHVFKLGTRYSEAMNATVLDENGKAKHMIMGCYGIGVSRTLAAVAEQYNDENGL 460 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDA 364 +WP+++AP+++ ++ + + + Sbjct: 461 LWPENLAPYQVHIVPVNMKNDETKKI 486 >gi|154148459|ref|YP_001406198.1| threonyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381] gi|171769701|sp|A7I107|SYT_CAMHC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|153804468|gb|ABS51475.1| threonyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381] Length = 609 Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 80/441 (18%), Positives = 163/441 (36%), Gaps = 41/441 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L IL+E RD I +++ L T Q G+ WLP G + + I+ R G Sbjct: 204 YLRILEEAKKRDHRIIGNEMKLFT-FDDQIGAGLPVWLPNGARMRSKLEKILFGVHRRRG 262 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + AD W SG Y +Y + M +++ P + +++S I+SY Sbjct: 263 YEPVRGPEILKADAWKISGHYTNYKENM-YFTKIDEQEYGIKPMNCVGHIKVYQSEIRSY 321 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F++ + R E G+ R REF DA+ F + P K + ++ +I Sbjct: 322 RDLPLKFFEYGVVHRHEKSGVMHGLFRVREFTQDDAHIFCM-PSQIKENVLEILDFVDKI 380 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G T + + + D+ Sbjct: 381 MKNFGFSYEMEI------------------STKPEKAIGDDKVWEIATNALKEALDENGF 422 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + ++ F +++ + Sbjct: 423 KYGIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVD----FNLPSRFD----LGYID 471 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + +G+ ++ G+ + +AP +S+I I + Sbjct: 472 ENNERKQPVMLHRAILGSFERFIGILIEHTAGELPFF---IAPTGVSIIPIN---DAHLN 525 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ L+ + D E + + A+ P+ +++G V + V ++ R Sbjct: 526 YAKEVQKALANLEVDSEILSKNETLNKRIRTAEKGRVPMILVLGDNEVKNRSVALRDRRA 585 Query: 424 GIREDMSLEEVINYASHRFSN 444 + ++SL+E + + ++ + Sbjct: 586 RAQSNLSLDEFLEFVKNKLNE 606 >gi|308509394|ref|XP_003116880.1| CRE-TARS-1 protein [Caenorhabditis remanei] gi|308241794|gb|EFO85746.1| CRE-TARS-1 protein [Caenorhabditis remanei] Length = 749 Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 71/433 (16%), Positives = 148/433 (34%), Gaps = 43/433 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H S G W P G + + IR++ R G E+ Sbjct: 339 EEAAKRDHRKLGKEQDLF--FFHPLSPGSAFWYPKGAHIYNKLVDFIRKQYRRRGFTEVI 396 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + + LW SG + Y ++M + + + P + +F +Y LPF Sbjct: 397 TPNMYNKKLWETSGHWQHYSEDMFK-IEVEKEEFGLKPMNCPGHCLMFGHMPHTYNELPF 455 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F + R+E+ G+ R R F DA+ F + ++ + + ++ Sbjct: 456 RFADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCRKDQIAEE-IKQCLDFLEYAYEKVF 514 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + + P G E A+ T+ + ++ Sbjct: 515 GFTFKLNLSTRPEGFLGEIETWNQAEADLTEAL-----------------NATGRKWALN 557 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L N + + ++ F ++ ++ G+ Sbjct: 558 PGDGAFYGPKIDI---TIQDALKRNFQCATIQLD----FQLPNQFD----LSYFDEKGEK 606 Query: 310 HYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 M + R+ A + ES + RD Sbjct: 607 QRPVMIHRAVLGSVERMTAILTESYGGKWPFWLSPRQCKIITV-------HESVRDYASD 659 Query: 368 IYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + ++ + G +V +D G+ + Q + L F +++G+K + V ++ R +R Sbjct: 660 VKKKIFEAGFEVEYDATCGDTMNKQVRNSQLAQFNFILVIGAKEKENGTVNVRTRDNAVR 719 Query: 427 EDMSLEEVINYAS 439 ++ LE++++ Sbjct: 720 GEVPLEKLLSKFR 732 >gi|91070150|gb|ABE11072.1| threonyl-tRNA synthetase [uncultured Prochlorococcus marinus clone HF10-11A3] Length = 638 Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 135/442 (30%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD K L I + S G+ W P G + IR + Sbjct: 231 YLTRIEEAEKRDHRKLGKKHSLF--HIQEESPGMIFWHPNGWTIYQVLEKYIRGILKKND 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P LW +SG ++ + +M ++ P + +F +KSY Sbjct: 289 YLEIKTPQAVDKSLWEKSGHWEKFRDDMFT-TASENRTYAIKPMNCPCHIQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 ++LP + R+E G+MR R F DA+ F T E + + + Sbjct: 348 KDLPIRLAEFGSCHRNEPSGALHGLMRVRNFTQDDAHIFC-TEEQIQEEVSTFIDLVFEV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ + P S E D + + D+ Sbjct: 407 YKTFGFDEIIIKLSTRPQKRVGSEE-----------------IWDKSEEALSKALDNKNL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ AT+ Sbjct: 450 KWELQPGEGAFYGPKIEF---SLKDCLNRVWQCGTIQVDFSMPIRLD--------ATYVD 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + +G+ ++ ++ K IW I + + D Sbjct: 499 INNEKRNPVMLHRAILGSFERFIGILIEQYEAKFPIW------IAPYQIILLSITDRNID 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C K L+ G D E+IG + A L PL ++G K + ++ Sbjct: 553 KCLKFNELLNNNGYRSKVDIRNEKIGYKIREATLKRVPLIAVIGDKEEEIDSIALRALNG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 +L + Sbjct: 613 RNLGIFNLPNLYKLMDELIDKK 634 >gi|332295956|ref|YP_004437879.1| threonyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796] gi|332179059|gb|AEE14748.1| threonyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796] Length = 606 Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 76/433 (17%), Positives = 141/433 (32%), Gaps = 41/433 (9%) Query: 11 LQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 L+E RD +L L + M + G+ W P G + +R+E + G + Sbjct: 202 LEEVYKRDHRKLGKELDLYS-MADEVGAGLILWHPNGGVIRTIIEDYLRKEHVKRGYEIV 260 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P + + +W SG +D Y + M + + + + P + I+ S +SYR+LP Sbjct: 261 YTPHMMNLKIWKISGHFDFYKENM-YIFENDGQEYAVKPMNCPGHMMIYNSKTRSYRDLP 319 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 F+++ +R E G++R R F DA+ F + L + Sbjct: 320 IRFFELGTVYRFERSGALHGLLRVRGFTQDDAHIFCTNEQLQDEII-----GVLNFAKDM 374 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 S D S + + + S + I Sbjct: 375 MELFGFKYVVSVGTRPDGS--------------IGTDEQWNLATNSLISALKQKNIEFEI 420 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 ++ A Y V +L D+L ++ + + DG Sbjct: 421 IDGDGAFYGPKIQV---ELIDALGRKWTGPTIQVDFALP--------ERFNLEYADKDGT 469 Query: 309 DHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 M + R + A+IE+ D + Sbjct: 470 KKRPVMIHRTVVGSMERFLGALIENYAGVFPAWLSPIQIIIIPV-----KEDSELLEYSS 524 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 ++ +LSK V D E + + A+L P +++G K + + + ++ R Sbjct: 525 EVEKKLSKEDYRVKVDKRNETLKYRIRDAELNRIPYILVIGKKELDEKLISLRTRGMKDE 584 Query: 427 EDMSLEEVINYAS 439 MS+EE + S Sbjct: 585 GQMSIEEFLKRLS 597 >gi|224534482|ref|ZP_03675058.1| threonine--tRNA ligase [Borrelia spielmanii A14S] gi|224514159|gb|EEF84477.1| threonine--tRNA ligase [Borrelia spielmanii A14S] Length = 581 Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 69/443 (15%), Positives = 150/443 (33%), Gaps = 37/443 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L + +E RD +L L + + G+ + P G K + REE ++ Sbjct: 172 RSYLNLREEIKKRDHRKLGKELDLFSIH-EEIGPGLVFFHPNGAKIRALIEDFWREEHSK 230 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + LW SG D Y M + + P + I+ + Sbjct: 231 NGYDILFSPHIGKSWLWQTSGHLDFYKDSMFEKIEMDKSDYYLKPMNCPFHIAIYNTGKH 290 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LPF + ++ +R E G+MR+R F DA+ + ++ + Sbjct: 291 SYRDLPFRWAELGTVYRYEKIGALHGMMRARGFTQDDAHIICTHSQVVDE-IKEVLRFAI 349 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ + G S+ + P + + + + Sbjct: 350 YMWSKFGFNSLKAYLSTKP-----------------EKFVGNDSDWEMSLKVLEEALSGF 392 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I + A Y D+ K+ DSL ++S + F ++++ +A Sbjct: 393 KVPYEIDKGGGAFYGPKIDL---KIVDSLEREWQMSTVQFD----FNLPERFNMTYTAE- 444 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ ++ + G +W I + Sbjct: 445 --DGKEKRPFMIHRALLGSIERFFGILIEHYGGAFPLW------LSPIQAVIIPVNNAVE 496 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D K+ + G + D+ ++ ++ P I+G + ++ K+ I+ R Sbjct: 497 DYAIKVLNKFKNEGIRIKLDNTSSRMNAKIREYQAKKIPYMFIIGEREATEEKISIRTRT 556 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L+E + + + Sbjct: 557 NEQINGIKLDEAFEFILLKIRDK 579 >gi|67475342|ref|XP_653365.1| threonyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS] gi|56470308|gb|EAL47979.1| threonyl-tRNA synthetase, putative [Entamoeba histolytica HM-1:IMSS] Length = 676 Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 69/445 (15%), Positives = 144/445 (32%), Gaps = 36/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y + + RD + + L H S G WLP G + + + ++R E Sbjct: 267 LKEYIKRAEEADKRDHRLIGRQQDLF--FFHVLSPGSCFWLPHGTRIYNKLVELMRSEYR 324 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P + + LW SG + Y +M + + P + +F S Sbjct: 325 VLGYQEVITPNIFLSTLWETSGHWQHYKDDMFSF-ECEKQTFALKPMNCPGHCVMFASKK 383 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR LP + + + R+EL G+ R R F+ D++ F + Sbjct: 384 RSYRELPLRYAEFGVLHRNELTGALHGLTRVRRFVQDDSHIFCTMDQIESEVT-----GV 438 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L + ++ I L+ E + + + +D Sbjct: 439 LNLMKKIYKIF-------------GFKTEIALSTRNEKKFMGEIETWNKAEAMLTQVLND 485 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I A Y D+ E D+L +V+ ++ F ++ L + Sbjct: 486 SHLPFVINAGDGAFYGPKIDIRIE---DALGRKHQVATVQLD----FQLPLRFKLDYMSE 538 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 K + + R A + E + + + Sbjct: 539 DPNQPLKTPVMVHRAVLGSIERFTAILTEHLAGKWPFWLSPR-------QVMVCTVSEKY 591 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + K+ L+ G DD ++ + A + + +++G + + + V ++ R Sbjct: 592 NEYGAKVTKELNDAGFYADLDDSDNKLPKKIRNAQVAQYNFILVIGEEELVSNSVNVRTR 651 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + + +E I + ++ + Sbjct: 652 ENKVEGKVEFKEFIKHLKQLEADKQ 676 >gi|325963430|ref|YP_004241336.1| Ser-tRNA hydrolase; threonyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3] gi|323469517|gb|ADX73202.1| Ser-tRNA hydrolase; threonyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3] Length = 669 Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 63/450 (14%), Positives = 122/450 (27%), Gaps = 47/450 (10%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 I + RD +L L + + G+ + P G + R+ G Sbjct: 252 RIAEAERRDHRKLGSELDLFS-FPDELGSGLPVFHPKGGIIRKEMEDYSRQRHVEAGYEF 310 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTD 116 + P + L+ SG D Y M + + P + + Sbjct: 311 VYTPHITKGHLYEVSGHLDWYRDGMFPAMHVDAELNEDGTVRKPGQDYYLKPMNCPMHNL 370 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IFRS +SYR LP ++ +R E G+ R R DA+ + + Sbjct: 371 IFRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTREQMKDELTK 430 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 L + GL + + + + + Sbjct: 431 -TLNFVLGLLKDYGLNDFYLELST----------------KDPEKYVGEDAAWEEATRTL 473 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 + A Y + + D+L ++S ++ F ++ Sbjct: 474 AEVAQESGLELVPDPGGAAFYGPKI---SVQAKDALGRTWQMSTIQLD----FNLPERFE 526 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 L A + V + G++ V+ + G W V I + Sbjct: 527 LEFQAA---DGTRQRPVMIHRALFGSIERFMGVLTEHYAGAFPAWLAPVQVVGIPVA--- 580 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + + + +L G D ++ + A P +I G Sbjct: 581 ---ETFNEYMFDVVDQLKAAGIRAEVDTSSDRFPKKIRTASKDKIPFVLIAGGDDAEAGA 637 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + R + + E + + N Sbjct: 638 VSFRFRDGSQDNGVPVAEAVKRITEAVRNR 667 >gi|315282166|ref|ZP_07870634.1| prolyl-tRNA synthetase [Listeria marthii FSL S4-120] gi|313614198|gb|EFR87874.1| prolyl-tRNA synthetase [Listeria marthii FSL S4-120] Length = 308 Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 124/294 (42%), Positives = 167/294 (56%), Gaps = 5/294 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR++ F+P L+E P DAE+ SH+L+LR G I Q + GIYS+LPL L + IIREE Sbjct: 1 MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLPLATLMLRKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA E+ +P LQ A+LW ESGR++ YG E++RL DR + GPTHEEV+T + R Sbjct: 61 LEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASRDFALGPTHEEVITALLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E YN M + Sbjct: 121 EVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--- 237 Y IF R GL+ + A+SG IGG+ S EF+ L+D GE + S D+ +E Sbjct: 181 YSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYSD-ASDYAANTEMAPVL 239 Query: 238 -DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 L +E+ P + E L + + + ++ I Sbjct: 240 YMEKKSHELEKDLEKVATPDQKSIGDIVEFLEVPIEKTMKSMLYQVDEEVIMVL 293 >gi|162447220|ref|YP_001620352.1| threonyl-tRNA synthetase [Acholeplasma laidlawii PG-8A] gi|189083597|sp|A9NF46|SYT_ACHLI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|161985327|gb|ABX80976.1| threonyl-tRNA synthetase [Acholeplasma laidlawii PG-8A] Length = 642 Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 165/442 (37%), Gaps = 34/442 (7%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD L + + G+ WLP G + I +++ G Sbjct: 230 LVMLEERKLRDHRKIGKDLDIFMT-SQEVGSGLPFWLPKGATIRRIIERYITDKELELGY 288 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSY 125 + + P + + + + +SG +D Y + M D D M + P + I++ I SY Sbjct: 289 LHVYTPIMANVEFYKQSGHWDHYHENMYPPMDLGDGEMLVLRPMNCPHHMMIYKKDIHSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP F ++ + R E G+ R RE + DA+ F + + + + Sbjct: 349 RELPIRFAELGMMHRYEKSGALSGLQRVREMTLNDAHIFVRPDQIKEEFMRVVHLIIEVY 408 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDII 243 + D + + D M SE D++ Sbjct: 409 KDFKITDYSFR---------------LSYRDPENKEKYFDDDQMWQRAESELKNVMDEMK 453 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 A Y D+ ++ ++ + +S ++ F ++ T+ Sbjct: 454 LPYKEAIGEAAFYGPKLDI---QVRTAMGMEETLSTVQLD----FLLPERFD----LTYV 502 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 G DGK+++ + + G + + + + +P +AP ++ LI + + +D Sbjct: 503 GEDGKNNHRPVVIHR-GVVSTMERFVAYLIEEYKGSFPLWLAPVQLKLIPVNL--DLHKD 559 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ +L K+G V D E++G + A L P Q++VG ++ + + + Sbjct: 560 YVMNLHEQLKKLGFRVESDFRNEKLGYKIREAQTLKIPYQLVVGDNEMNTHSITYRPYGS 619 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + ++S++ I + R N Sbjct: 620 EKQINISIDGFIKLLNERMINK 641 >gi|317129168|ref|YP_004095450.1| prolyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] gi|315474116|gb|ADU30719.1| prolyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] Length = 566 Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 127/281 (45%), Positives = 175/281 (62%), Gaps = 1/281 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S + P L++ P DAE+ SH+LMLR G+I Q + G+YS LPLG KAL V AI+REE Sbjct: 1 MKQSTFLAPTLRDVPSDAEVTSHQLMLRAGLIRQSTSGVYSLLPLGLKALKKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA EM +P +Q ++LW ESGR+++YG E++RL DR+ + GPTHEEV+T + R Sbjct: 61 MNRAGAQEMLMPAIQQSELWKESGRWEAYGPELMRLHDRHGREFALGPTHEEVITTVVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +K+Y+ LP T YQIQ KFRDE RPRFGV+RSREFLMKDAYSFD + EG SYNKM+ + Sbjct: 121 DVKTYKKLPMTLYQIQTKFRDERRPRFGVLRSREFLMKDAYSFDTSQEGLDESYNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP-IPSENTDF 239 Y IF R GL + A+SG +GG +HEF+VL++ GE + S I + Sbjct: 181 YTNIFTRCGLDFRAVVADSGAMGGKDTHEFMVLSEIGEDTIAYSDSSSFAANIEIAPVNV 240 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 + + + E+ + F + K + + Sbjct: 241 EYETTNELLKEKELVNTPEKKSIDEVAEFLQVERQKLIKSI 281 Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 3/190 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + +D+ N + D P+ K GIEVGH+F GT+YS M A + +GK+ + Sbjct: 378 VSQFADLRNIQEGDPSPDGKGTIRFKEGIEVGHVFKLGTRYSEAMGAMYLDENGKNKPMI 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R +AA+IE HD GIIWP SV PF + ++ I + + E++Y L+ Sbjct: 438 MGCYGIGVTRTLAAIIEQFHDESGIIWPTSVTPFDVHIVPINMKQEEQKQLAEELYNELT 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + +V DD E+ G +F ADL GFP++V VG K ++ VE+K R TG ++ ++ Sbjct: 498 EERLEVLIDDRPERPGVKFKDADLYGFPVRVTVGKK-ANEGVVELKVRKTGETLEVHKKD 556 Query: 434 VINYASHRFS 443 ++ Sbjct: 557 LLRTMKELLK 566 >gi|261405336|ref|YP_003241577.1| prolyl-tRNA synthetase [Paenibacillus sp. Y412MC10] gi|261281799|gb|ACX63770.1| prolyl-tRNA synthetase [Paenibacillus sp. Y412MC10] Length = 575 Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 117/232 (50%), Positives = 151/232 (65%), Gaps = 1/232 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ + +++ P +AE SH+ MLR G I Q + GIYS+LPLG + L + IIR+E Sbjct: 1 MRQSQLLMTTMRDVPSEAEALSHQWMLRGGYIRQTAAGIYSYLPLGWRVLRKIETIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P +Q A+LW ESGRYD YG E++RL DR+D+ + GPTHEEV+T I R Sbjct: 61 MDAAGGQELLMPAVQPAELWKESGRYDVYGAELIRLYDRHDREFVLGPTHEEVITSIVRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP YQIQ K+RDE RPRFG++R REFLMKDAYSFD EG SY M+ + Sbjct: 121 EISSYRKLPVNLYQIQSKYRDERRPRFGLLRGREFLMKDAYSFDRDWEGLDASYRNMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDL-SHEFIVLADTGETQVFCSKDFMDFP 231 Y RIF R GL + A++G IGG +HEF+ LAD GE V D Sbjct: 181 YERIFSRCGLMFRAVEADAGAIGGQGETHEFMALADIGEDTVVSCSDCRYAA 232 Score = 144 bits (362), Expect = 4e-32, Method: Composition-based stats. Identities = 67/183 (36%), Positives = 95/183 (51%), Gaps = 4/183 (2%) Query: 261 DVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D N + P RGIE+GH+F GTKYS M+ + ADG++ + MG YG Sbjct: 389 DFRNVTEGEPCPRCGAPLQFHRGIELGHVFKLGTKYSDAMNGKYLDADGREKPLIMGCYG 448 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG RV+AA+ E + ++WP SVAPF++ +I + D+ E IY LS G + Sbjct: 449 IGVSRVMAAIAEQRISDERLVWPMSVAPFRVHIIPVAVKDETQMQLAEHIYRELSGAGLE 508 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 DD E+ G +F ADL G PL++IVG + + +VE GI+ M EE I + Sbjct: 509 PLLDDRDERAGVKFKDADLAGAPLRIIVG-RGAASGEVEWMG-EDGIKISMPAEEAIQRS 566 Query: 439 SHR 441 Sbjct: 567 REE 569 >gi|116630042|ref|YP_815214.1| threonyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323] gi|238853770|ref|ZP_04644136.1| threonine--tRNA ligase [Lactobacillus gasseri 202-4] gi|282851336|ref|ZP_06260701.1| threonine--tRNA ligase [Lactobacillus gasseri 224-1] gi|311110329|ref|ZP_07711726.1| threonine--tRNA ligase [Lactobacillus gasseri MV-22] gi|122273021|sp|Q041U6|SYT_LACGA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|116095624|gb|ABJ60776.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323] gi|238833579|gb|EEQ25850.1| threonine--tRNA ligase [Lactobacillus gasseri 202-4] gi|282557304|gb|EFB62901.1| threonine--tRNA ligase [Lactobacillus gasseri 224-1] gi|311065483|gb|EFQ45823.1| threonine--tRNA ligase [Lactobacillus gasseri MV-22] Length = 643 Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 74/434 (17%), Positives = 151/434 (34%), Gaps = 36/434 (8%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L L + + G+ W+P G V I +++ G + P L Sbjct: 238 RDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRVVERYIVDKEVADGYEHVYTPVL 295 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y +M D D M P + I++ HI+SYR LP Sbjct: 296 MNVDAYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIA 355 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + + K+ + ++ + Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIREE-FAKVLKLIMDVYKDFDITD 414 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + + + + + DD+ E Sbjct: 415 YYFRLS-------------YRDPKNTDKYYANDEMWEKSQSMLKAAMDDLGLDYVEAEGE 461 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ T+ G DG++H Sbjct: 462 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----GLTYVGQDGEEHRP 510 Query: 313 -QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + +G M A + + G W + I +++ +K+ Sbjct: 511 VMIHRGIVGTMERFIAYLTEIYKGAFPTWLA-----PVQAEIIPVNEEAHGAYADKVREE 565 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+K G D E++G + + P +++G ++ + V ++ T + SL Sbjct: 566 LAKRGFRAEVDHRNEKLGYKIRESQTQKVPYTLVLGDDEMNANGVNVRRYGTEEQISKSL 625 Query: 432 EEVINYASHRFSNN 445 ++ I + Sbjct: 626 DDFIAEIDADVKSY 639 >gi|255326388|ref|ZP_05367472.1| proline--tRNA ligase [Rothia mucilaginosa ATCC 25296] gi|255296605|gb|EET75938.1| proline--tRNA ligase [Rothia mucilaginosa ATCC 25296] Length = 610 Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 113/317 (35%), Positives = 162/317 (51%), Gaps = 7/317 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S F+ L+E+P DAE+ASHKL++R G I + + G+Y+WLPLG K L V IIREE Sbjct: 4 RLSNLFVRTLREDPVDAEVASHKLLVRAGYIRRAAPGVYTWLPLGLKVLRKVENIIREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ P L + + + R+D YG + RL DR M+ PTHEE+ T + + Sbjct: 64 DAIGAQEVHFPALLPREPYEATNRWDEYGDNLFRLKDRKGADMLLAPTHEEMFTLLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSF++ EG +Y +Y Sbjct: 124 YSSYKDLPVYLYQIQTKYRDEARPRAGLLRGREFVMKDSYSFNIDDEGLNEAYMAHRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF RLGL+ + + A+SG +GG S EF+ GE S + + T + Sbjct: 184 QRIFERLGLEIVIVTAQSGAMGGSRSEEFLHPTPIGEDTFVRSAGGYAANVEAVTTVVPE 243 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I + P A D + ++L E + G + T T Sbjct: 244 EIEIT-----EDTPAALVVDTPDSATIETLVERMNELHSEVTGGTLEASQTL--KCFLGT 296 Query: 302 FKGADGKDHYVQMGSYG 318 G+ +G G Sbjct: 297 VITPSGERKVFAVGVPG 313 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 96/189 (50%), Gaps = 5/189 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 + + D P+ + V+ARGIE+GHIF G KY+ + +GK V MG Sbjct: 422 GVIEACEVREGDPAPDGSGELVAARGIEMGHIFALGRKYAEALGLKVLDQNGKLQTVTMG 481 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R +AA+ E +HD KG+IWP ++AP + I I + + E++ A L Sbjct: 482 SYGVGVTRALAAIAEGNHDEKGLIWPRNLAPADVH-IVITGKEAASHEYAEELSASLESA 540 Query: 376 GCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G V DD + G +F A+LLG P +++G + D +E+K R +G ++S+E Sbjct: 541 GLQVMLDDRPKTSPGVKFGDAELLGVPTILVIG-RGFKDGVLELKDRRSGEAREVSVENA 599 Query: 435 INYASHRFS 443 + Sbjct: 600 VAEVIAEVR 608 >gi|326329871|ref|ZP_08196188.1| threonine--tRNA ligase [Nocardioidaceae bacterium Broad-1] gi|325952338|gb|EGD44361.1| threonine--tRNA ligase [Nocardioidaceae bacterium Broad-1] Length = 659 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 66/444 (14%), Positives = 133/444 (29%), Gaps = 35/444 (7%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 I + RD +L L + + G+ + P G + +R G Sbjct: 249 LARIEEAERRDHRKLGRELDLYS-FPDELGSGLPVFHPKGGVIKREMEDYVRRRHIEEGF 307 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P + L+ SG Y M + + I+++ +SYR Sbjct: 308 SYVGTPHISKDGLFHTSGHLPYYADTMFPPMELEGAKYQLKAMSCPMHNLIYKAKGRSYR 367 Query: 127 NLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP ++ +R E G+ R R D++S+ + + L + Sbjct: 368 ELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDSHSYVTKEQAPAE-IKHLLDFVLGVL 426 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 GL + + D + S + + + Sbjct: 427 KDFGLDDFYLELSTR--------------DADNAKFIGSDEQWETATKILEDVATESGLE 472 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 A Y + + D++ ++S + FG ++ A Sbjct: 473 LVADPGGAAFYGPKI---SVQARDAIGRTWQMSTIQYDFNQPARFG--------LEYQAA 521 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG + S G++ V+ + P +AP ++ I + D Sbjct: 522 DGTRQEPVMIHSAKFGSIERFLGVLV---EHYAGAMPPWLAPVQVVGIPVA---DAFADY 575 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ +L G V D+ ++ + A L P +I G + V V ++R Sbjct: 576 LYEVAGKLKAKGIRVEVDESDDRFQKKIRNAQLQKIPFMLIAGGEDVEKGAVSFRYRDGR 635 Query: 425 IREDMSLEEVINYASHRFSNNRPV 448 + ++E I ++ V Sbjct: 636 QENGIPVDEAIERIVAAVESHEQV 659 >gi|166367159|ref|YP_001659432.1| prolyl-tRNA synthetase [Microcystis aeruginosa NIES-843] gi|189083503|sp|B0JTD7|SYP_MICAN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|166089532|dbj|BAG04240.1| proline-tRNA ligase [Microcystis aeruginosa NIES-843] Length = 603 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 118/240 (49%), Positives = 154/240 (64%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHK ++R G I + GIY++LPL + L V+ I+REE Sbjct: 1 MRLSQQLFVTLREDPAEAEIPSHKCLVRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N+ GA E +P LQ A+LW ESGR+D+Y K M L DR ++ + GPTHEEV+T + Sbjct: 61 MNKAGAQECLLPQLQPAELWQESGRWDTYTKAEGIMFALTDRQNRELGLGPTHEEVITAV 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF+L E K +Y M Sbjct: 121 ARDLIRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFNLDEECLKKTYQAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 ++Y IF R GL + A+SG IGG S EF+VLAD GE +V + D + E Sbjct: 181 DIAYRNIFRRCGLAFRAVEADSGAIGGSASQEFMVLADAGEDEVLFTAD-EKYAANVEKA 239 Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 62/173 (35%), Positives = 94/173 (54%), Gaps = 1/173 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P SARGIEVGHIF G KYS M+A + G+ + MG YGIG R+ A +E Sbjct: 427 PNQTLQSARGIEVGHIFQLGYKYSQAMNAFYTNEAGESTPICMGCYGIGVSRLAQAAVEQ 486 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 S+D GIIWP ++AP++ ++ D E +Y L++ G + DD E+ G + Sbjct: 487 SYDKDGIIWPVAIAPYQAIVVIPNLADAEQVKTAESLYNELNQAGIETLLDDRDERAGVK 546 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 F ADL+G P +++ G K + KVE+ R + ++++ EV++Y S Sbjct: 547 FKDADLIGIPYRIVTG-KSLKSGKVELVERASKKASEVAINEVVSYLKTAISK 598 >gi|159030425|emb|CAO91326.1| proS [Microcystis aeruginosa PCC 7806] Length = 603 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 118/240 (49%), Positives = 154/240 (64%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHK ++R G I + GIY++LPL + L V+ I+REE Sbjct: 1 MRLSQQLFVTLREDPAEAEIPSHKCLVRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N+ GA E +P LQ A+LW ESGR+D+Y K M L DR ++ + GPTHEEV+T + Sbjct: 61 MNKAGAQECLLPQLQPAELWQESGRWDTYTKAEGIMFALTDRQNRELGLGPTHEEVITAV 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF+L E K +Y M Sbjct: 121 ARDLIRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFNLDEECLKKTYQAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 ++Y IF R GL + A+SG IGG S EF+VLAD GE +V + D + E Sbjct: 181 DIAYRNIFRRCGLAFRAVEADSGAIGGSASQEFMVLADAGEDEVLFTAD-EKYAANVEKA 239 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 62/173 (35%), Positives = 94/173 (54%), Gaps = 1/173 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P SARGIEVGHIF G KYS M+A + G+ + MG YGIG R+ A +E Sbjct: 427 PNQTLQSARGIEVGHIFQLGYKYSQAMNAFYTNEAGESTPICMGCYGIGVSRLAQAAVEQ 486 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 S+D GIIWP ++AP++ ++ D E +Y L++ G + DD E+ G + Sbjct: 487 SYDKDGIIWPVAIAPYQAIVVIPNLADAEQVKTAESLYNELNQAGIETLLDDRNERAGVK 546 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 F ADL+G P +++ G K + KVE+ R + ++++ EV++Y S Sbjct: 547 FKDADLIGIPYRIVTG-KSLKSGKVELVERASKKASEVAINEVVSYLKTAISK 598 >gi|218190922|gb|EEC73349.1| hypothetical protein OsI_07557 [Oryza sativa Indica Group] Length = 674 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 152/444 (34%), Gaps = 40/444 (9%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQN 62 K ++ +E R D L L + I + G+ W P G + ++ Sbjct: 264 KAYIHFKEEAKRRDHRRLGLDLDLFS--IQEDAGGGLVFWHPKGAIIRHVLEDSWKQIHL 321 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G + P + A+LW SG D Y + M D D+ P + +++ + Sbjct: 322 QRGYDLLYTPHVAKAELWKVSGHIDFYKENMYNQMDVEDELYQLRPMNCPYHILVYKRKL 381 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+ P ++ +R EL G+ R R F DA+ F L + + Sbjct: 382 HSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDE-IRGVLDLT 440 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +I + G + + + P S D + + +D Sbjct: 441 EQILGQFGFRYYEINLSTRPEKS-----------------VGSDDIWEKATLALKDALED 483 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ K+ D+L + S ++ F ++ + Sbjct: 484 KGWEYKVDEGGGAFYGPKIDL---KIEDALGRKWQCSTVQVD----FNLPERFDITY--- 533 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 K + + +G++ V+ + +P +AP + ++ + ++ Sbjct: 534 VNSNSEKKRPIMIHRAILGSLERFFGVLI---EHYAGDFPLWLAPIQARILPVTDNE--- 587 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 C ++ + L G GE++ A+ PL +VG K V + I+ R Sbjct: 588 LQYCNEVASELKSKGIRAEV-CHGERLPKLIRNAETKKVPLMAVVGPKEVQARTLTIRSR 646 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 +G M ++E +N Sbjct: 647 HSGEIGTMPVDEFFRRMQLAIANK 670 >gi|300361194|ref|ZP_07057371.1| threonine--tRNA ligase [Lactobacillus gasseri JV-V03] gi|300353813|gb|EFJ69684.1| threonine--tRNA ligase [Lactobacillus gasseri JV-V03] Length = 643 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 74/434 (17%), Positives = 151/434 (34%), Gaps = 36/434 (8%) Query: 16 RDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 RD L L + + G+ W+P G V I +++ G + P L Sbjct: 238 RDHRTIGRDLDLF--FVDPKVGAGLPYWMPKGATIRRVVERYIVDKEVADGYEHVYTPVL 295 Query: 75 QSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + D + SG + Y +M D D M P + I++ HI+SYR LP Sbjct: 296 MNVDAYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIA 355 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 ++ + R E G+ R RE + D ++F + + + K+ + ++ + Sbjct: 356 ELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIREE-FAKVLKLIMDVYKDFDITD 414 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R + + + + + DD+ E Sbjct: 415 YYFRLS-------------YRDPKNTDKYYANDEMWEKSQSMLKAAMDDLGLDYVEAEGE 461 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + +L ++ +S ++ F ++ T+ G DG++H Sbjct: 462 AAFYGPKLDIQTKT---ALGNDETMSTIQLD----FMLPERF----GLTYVGQDGEEHRP 510 Query: 313 -QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + +G M A + + G W + I +++ +K+ Sbjct: 511 VMIHRGIVGTMERFIAYLTEIYKGAFPTWLA-----PVQAEIIPVNEEAHGAYADKVREE 565 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L+K G D E++G + + P +++G ++ + V ++ T + SL Sbjct: 566 LAKRGFRAEVDHRNEKLGYKIRESQTQKVPYTLVLGDDEMNANGVNVRRYGTEEQISKSL 625 Query: 432 EEVINYASHRFSNN 445 ++ I + Sbjct: 626 DDFIAEIDADVKSY 639 >gi|188581528|ref|YP_001924973.1| threonyl-tRNA synthetase [Methylobacterium populi BJ001] gi|179345026|gb|ACB80438.1| threonyl-tRNA synthetase [Methylobacterium populi BJ001] Length = 675 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 72/443 (16%), Positives = 142/443 (32%), Gaps = 40/443 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E R D ++ L + G+ W G + A +R + Sbjct: 232 YLHRLEEAERRDHRRLGKEMDLF--HFQEEGPGVVFWHAKGWTIFQELIAYMRRRL-KGD 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-----KAMIYGPTHEEVMTDIFRS 120 E++ P + LW SG + Y + M + + P + IF+ Sbjct: 289 YAEVNAPQILDKSLWETSGHWGWYRENMFAAQSAGEEAEDKRWFALKPMNCPGHVQIFKH 348 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + + R E G+MR R F DA+ F + + Sbjct: 349 GLKSYRDLPLRMAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEDQLAAECLKIN-D 407 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L + G I ++ + P S A+ T+V E Sbjct: 408 LILSTYADFGFDQILVKLSTRPEKRVGSDALWDHAEAVMTRVL---------AQIEEQSG 458 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 I + ++ A Y + L D++ + + ++ F ++ Sbjct: 459 GRIKT--AVNPGEGAFYGPKFEY---VLRDAIGRDWQCGTTQVD----FNLPERFD---- 505 Query: 300 ATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A++ K V + G+M ++ G +W V ++ Sbjct: 506 ASYIDADSQKKPPVMIHRAICGSMERFTGILIEHFAGHFPLWLAPVQVVVATIT------ 559 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 ++ L + G V D E+I + L P+ + +G + + V + Sbjct: 560 SDADPYAREVVRVLERAGLRVEADLRNEKINYKVREHSLAKVPVLLALGRREAEERTVSV 619 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + ++L+ + Sbjct: 620 RRLGSQKTTTLTLDAAVAAFIEE 642 >gi|238618767|ref|YP_002913592.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.16.4] gi|259516721|sp|C4KKV9|SYT_SULIK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238379836|gb|ACR40924.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.16.4] Length = 545 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 75/443 (16%), Positives = 152/443 (34%), Gaps = 39/443 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + D + KL L + + G+ + P GQ + + A +RE + G Sbjct: 128 YLTWLEKAEETDHRLIGEKLDLFSFH-EEAGSGLVLFHPKGQTIRNELIAFMREINDSMG 186 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ + D+W SG Y Y +++ + + P + I++S ++Y Sbjct: 187 YQEVYTSHVFKTDIWKISGHYTLYRDKLI-VFNMEGDEYGVKPMNCPAHILIYKSKPRTY 245 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F + +R E + +G++R R F+ D + F + + + + Sbjct: 246 RDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIFLREDQLMEEIKMLISKTVEVW 305 Query: 185 FHR-LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I + P S E + + + + Sbjct: 306 HKFGFKDDDIKPYLSTRPDESIGSDE-----------------LWEKATNALISALQESG 348 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E+ A Y D ++ DSL ++S ++ F ++ + Sbjct: 349 LKFGIKEKEGAFYGPKIDF---EIRDSLGRWWQLSTIQVD----FNLPERF----KLEYI 397 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG + G++ A++ GK W ++ ++ ++ I Sbjct: 398 DKDGIKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTW---LSSVQVRVLPIT---DEVN 451 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + EK+ + K D GE + + A G P +IVG K S+ V ++ R Sbjct: 452 EYAEKVLNDMRKRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARG 511 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 ++ E+ + + Sbjct: 512 NIEVRNVKFEKFLELLITEIAQR 534 >gi|254391301|ref|ZP_05006505.1| threonyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|326440214|ref|ZP_08214948.1| threonyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|197704992|gb|EDY50804.1| threonyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] Length = 658 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 65/449 (14%), Positives = 139/449 (30%), Gaps = 38/449 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y + + RD +L L + + G+ + P G + R+ Sbjct: 245 LKQYLEFLAEAEKRDHRRLGSELDLFSV-PDEIGSGLAVFHPRGGIVRRVMEDYSRKRHE 303 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSH 121 G + P L+ +SG D Y + M P + + IF + Sbjct: 304 EEGYEFVYTPHATKGTLFEKSGHLDWYAEGMYPPMQLDGGTDYYLKPMNCPMHNLIFDAR 363 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SYR LP ++ +R E G+ R+R F DA+ + + ++ ++ Sbjct: 364 GRSYRELPLRLFEFGTVYRHEKSGVVHGLTRARGFTQDDAHIYCTREQMAEEL-DRTLTF 422 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 L + GL + + + S + + + Sbjct: 423 VLNLLRDYGLTDFYLELST----------------KDPEKYVGSDETWEEATEVLRRVAE 466 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + A Y + + D++ ++S ++ F ++ + Sbjct: 467 KQGLPLTPDPGGAAFYGPKI---SVQARDAIGRTWQMSTIQLD----FNLPERF----NL 515 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + DG + G++ AV+ + P +AP + I I Sbjct: 516 EYTAPDGSRQRPVMIHRALFGSIERFFAVLL---EHYAGAMPPWLAPVQAVGIPIG---D 569 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + + A K G V D +++ + L P +IVG + ++ V + Sbjct: 570 AHIEYLQSFAAEAKKRGLRVDVDASSDRMQKKIRNHQKLKVPFMIIVGDEDMNAGTVSFR 629 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNRPV 448 +R + + + ++ V Sbjct: 630 YRDGSQENGIPRDAALAKLEQVVADRVQV 658 >gi|218245600|ref|YP_002370971.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 8801] gi|257058646|ref|YP_003136534.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 8802] gi|218166078|gb|ACK64815.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 8801] gi|256588812|gb|ACU99698.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 8802] Length = 607 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 72/450 (16%), Positives = 154/450 (34%), Gaps = 39/450 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + RD +L L G+ W P G + ++ EQ Sbjct: 187 LTEYKRRKEEALKRDHRKLGKELGLFI-FSDPVGPGLPLWTPKGTIIRSTLEDFLKREQL 245 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA------MIYGPTHEEVMTD 116 + G + + P + DL+ SG + +Y ++M + N + P + Sbjct: 246 KRGYLSVVTPHIGRVDLFKISGHWQNYKEDMFPMMAENAEEAAQEIGFALKPMNCPFHIQ 305 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 I++S ++SYR LP + +R E G + D +TP+ + Sbjct: 306 IYKSELRSYRELPIRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLDAEFLN 365 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + L +F L LK+ R D + S + + + Sbjct: 366 VVDLILAVFKSLQLKNFKARLS--------------FRDPESDKYIGSDEAWEKAQNAIR 411 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + A Y D D L ++ ++ F Sbjct: 412 RAVQTLEMDYFEAPGEAAFYGPKLDFI---FHDVLEREWQLGTVQVDYNLPQRF------ 462 Query: 297 PMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 + DG + G++ + ++ + +P ++P + L+ + Sbjct: 463 --ELEYVAEDGTRQRPVMIHRAPFGSLERLIGILI---EEYAGDFPLWLSPIQARLLPV- 516 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + D +++ +++ ++G D GE++G A+ P+ ++G+K V + Sbjct: 517 --SDLQLDYAKEVASKMQQLGIRAEADTSGERLGKMVRNAEKQKIPVMGVIGAKEVESNS 574 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRFSNN 445 + I+ R +G ++ +EVI + +N+ Sbjct: 575 LSIRTRASGELGTIATDEVIKKLAEAITNH 604 >gi|149916340|ref|ZP_01904860.1| threonyl-tRNA synthetase [Roseobacter sp. AzwK-3b] gi|149809794|gb|EDM69646.1| threonyl-tRNA synthetase [Roseobacter sp. AzwK-3b] Length = 663 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 81/447 (18%), Positives = 143/447 (31%), Gaps = 44/447 (9%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + Y + + RD ++ L + + + G W P G + +R +Q Sbjct: 232 KLKDYLTFLEEAEKRDHRKLGREMDLF--HMQEEAPGQIFWHPNGWTIYTTLQDYMRRQQ 289 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIY-----GPTHEEVMTD 116 R G +E++ P + LW SG +D Y + M + D A P + Sbjct: 290 RRGGYVEVNTPQVVDRKLWEASGHWDKYQEHMFIVEVDEDHAREKSINALKPMNCPCHVQ 349 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IF +KSYR+LP + R E G+MR R F DA+ F + + Sbjct: 350 IFNRGLKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDAHIFCR-EDQIEAETK 408 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 K I+ LG ++ P S + +++ + DF + Sbjct: 409 KFIGFLSEIYRDLGFSDFKVKFSDRPEKRAGSDDVWDKSESALKAAT-AAAGADFELNL- 466 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 A Y + L D++ + + ++ F + Sbjct: 467 ---------------GEGAFYGPKLEF---VLTDAIGRDWQCGTLQVD----FVLPER-- 502 Query: 296 LPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + AT+ DG H + +G+ ++ H GK W S++ Sbjct: 503 --LDATYIAEDGAKHRPVMLHRAVLGSFERFIGILIEEHAGKLPFWMAPRQVVVASIV-- 558 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 + + ARL G D E+I + + P+ + G K V D Sbjct: 559 ----SEANAYVQDVVARLVAAGVRAEADIRNEKINYKVREHSVGKVPVILACGMKEVEDG 614 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHR 441 V ++ L +V Sbjct: 615 TVSLRRLGEKQSTVQPLADVTEALKRE 641 >gi|227513539|ref|ZP_03943588.1| threonine--tRNA ligase [Lactobacillus buchneri ATCC 11577] gi|227083412|gb|EEI18724.1| threonine--tRNA ligase [Lactobacillus buchneri ATCC 11577] Length = 658 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 79/451 (17%), Positives = 162/451 (35%), Gaps = 39/451 (8%) Query: 2 RRSKY---FLPILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAII 57 ++S+ + + RD + ++L L + + G+ W+P G + I Sbjct: 236 KQSELDEDLKKRQEAHERDHRVIGNQLDLF--FVDPKVGAGLPYWMPNGATIRRTIERYI 293 Query: 58 REEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTD 116 +++ G + P L + DL+ +SG ++ Y ++M D D + + P + Sbjct: 294 VDKEVANGYEHVYTPVLANLDLYKQSGHWEHYREDMFPPMDMGDGEELELRPMNCPSHIQ 353 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 I+ HI+SYR LP ++ + R E G+ R RE + D ++F + + N Sbjct: 354 IYNHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIQEEFQN 413 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 + + + D T+ + D M S Sbjct: 414 ILKLMVEVYHDFDINDYTFR---------------LSYRDPENTEKYFDDDEMWNRAQSM 458 Query: 236 -NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY 294 D++ E A Y DV + +L + +S ++ F ++ Sbjct: 459 LKGAMDELGLDYVEAEGEAAFYGPKLDVQTKT---ALGNEETLSTIQLD----FMLPERF 511 Query: 295 SLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 L + G DGK H M G + + + + +P +AP ++ +I + Sbjct: 512 DLH----YVGEDGKQHRPVMIHR--GLVSTMERFVAYLTEIYKGAFPTWLAPHQVKIIPV 565 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 D ++I +L ++ D E++G A P ++VG + V+ Sbjct: 566 --SQDKHGDYAKQINDQLRRLKIRSSVDTRAEKMGYLIRDAQTHKIPYTLVVGDEEVNGK 623 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V ++ + SL+ ++ ++ Sbjct: 624 SVSVRRYGEKETQAESLDTFVDEIQKDIASY 654 >gi|168012416|ref|XP_001758898.1| predicted protein [Physcomitrella patens subsp. patens] gi|162690035|gb|EDQ76404.1| predicted protein [Physcomitrella patens subsp. patens] Length = 613 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 77/438 (17%), Positives = 153/438 (34%), Gaps = 40/438 (9%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQN 62 K + +E R D L L + I + G+ W P G + ++ Sbjct: 204 KAYQVQKEEAKRRDHRRLGQDLNLFS--IQEDAGGGLVFWHPKGSMVRHIIEDYWKKMHF 261 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P + DLW SG Y+ Y + M ++ P + +++ + Sbjct: 262 ANGYELLYTPHIAKLDLWKTSGHYEFYKENMFDQMRIEEELYQIRPMNCPFHIQVYKDSL 321 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR LP ++ +R E G+ R R F D + F L + + Sbjct: 322 RSYRELPMRVAELGTVYRYERSGALHGLFRVRGFTQDDGHIFCLPDQIRDE-IRGVLDLT 380 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + + G + + P SHE + + D Sbjct: 381 EIVLKQFGFTKFEINLSTKPEKAVGSHE-----------------IWEKSTTALREALQD 423 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 SI E A Y DV K+ D++ + S ++ F ++++ Sbjct: 424 KGWEYSIDEGGGAFYGPKIDV---KIEDAIGRKWQCSTIQVD----FNLPERFNMVY--- 473 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + + + +G++ ++ + +P +AP + L+ + H+ Sbjct: 474 VDTDTSRKQPILIHRAILGSIERFFGILV---ENYAGDFPLWLAPVQARLLPVTDHE--- 527 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D C+ + A+L + G GE++G A+ P+ +VG K V + + ++ R Sbjct: 528 VDYCKNVVAKLREKGIRAEVVF-GERLGKLIRNAETQKIPVMAVVGPKEVESATLTVRTR 586 Query: 422 LTGIREDMSLEEVINYAS 439 G +SL+++ + Sbjct: 587 HGGELGTLSLDDLTHKIQ 604 >gi|293189858|ref|ZP_06608572.1| proline--tRNA ligase [Actinomyces odontolyticus F0309] gi|292821273|gb|EFF80218.1| proline--tRNA ligase [Actinomyces odontolyticus F0309] Length = 602 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 2/276 (0%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S +FL L+E+P DAE+ SHKL++R G I + + GIY+WLPLG + L + I+REE + Sbjct: 5 LSTFFLRTLREDPADAEVNSHKLLVRAGYIRRSAPGIYTWLPLGLRTLRKIEDIVREEMD 64 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+ P L A+ + + R++ YG + +L DR + PTHEE+ T + + Sbjct: 65 AMGAQEVHFPGLIPAEPYKATNRWEEYGPTLFKLNDRKGGDYLLAPTHEEMFTLLVKDMY 124 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSFD+ EG SY +Y Sbjct: 125 SSYKDLPATLYQIQTKYRDEARPRAGLIRGREFVMKDAYSFDIDDEGLNASYQAERDTYE 184 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RIF RLGL+ + + A SG +GG S EF+ + GE S + T + Sbjct: 185 RIFQRLGLRYVIVSAMSGAMGGSRSEEFLHPSPIGEDTFVASPGGYAANAEAVTTPVPEA 244 Query: 243 ISLNSIVEQWTA--PYAATSDVHNEKLFDSLPENKR 276 + + P A T + + L D P R Sbjct: 245 QDASGVPAPLEVPTPDAPTIESLVDLLNDQYPREDR 280 Score = 146 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 62/187 (33%), Positives = 95/187 (50%), Gaps = 5/187 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ RGIE+GHIF G KY+ + T +GK V MG Sbjct: 410 GTIEAAEVREGDLAPDGSGPLHLERGIEIGHIFQLGRKYAKALGLTVLDENGKTQVVTMG 469 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG RV+AA+ E++ D KG+ WP +APF + ++ D+ + + + L Sbjct: 470 SYGIGVTRVMAALAEANCDDKGLSWPAQIAPFDVHVLATGKGDE-VFETAQSLGEELDAA 528 Query: 376 GCDVFWDD-MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV DD G +F +L+G P ++VG + ++DS+VEI+ R TG + +EE Sbjct: 529 GLDVLVDDRRKVSAGVKFKDYELVGVPFGLVVG-RSLADSEVEIRVRATGETIVLPVEEA 587 Query: 435 INYASHR 441 + Sbjct: 588 VARLREL 594 >gi|207344345|gb|EDZ71519.1| YIL078Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 689 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 75/440 (17%), Positives = 156/440 (35%), Gaps = 40/440 (9%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + + RD + L + ++ S G WLP G + + + ++R E + G E+ Sbjct: 279 EASMRDHRKIGKEQELF--LFNEMSPGSCFWLPHGTRIYNTLVDLLRTEYRKRGYEEVIT 336 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + ++ LW SG + +Y + M + P + +F+S +SYR LP+ Sbjct: 337 PNMYNSKLWETSGHWANYKENMFTFEVEKET-FGLKPMNCPGHCLMFKSRERSYRELPWR 395 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + R+E G+ R R F DA+ F + Sbjct: 396 VADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCT-----HDQIESEIENIFNFLQ---- 446 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 I G EF + T + + D + I Sbjct: 447 ----------YIYGVFGFEFKMELSTRPEKYVGKIETWDAAESKLESALKKWGGNWEINA 496 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D+ + D+L + + ++ F ++ L + + ++ + Sbjct: 497 GDGAFYGPKIDIM---ISDALRRWHQCATIQLD----FQLPNRFELEFKSKDQDSESYER 549 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V + +G++ + A++ + WP ++P ++ ++ + Q E + Sbjct: 550 PVMIHRAILGSVERMTAILT---EHFAGKWPFWLSPRQVLVVPVGVKYQG---YAEDVRN 603 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE--- 427 +L G D G + + +L + IVG + +++ V I++R ++ Sbjct: 604 KLHDAGFYADVDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMNEKSVNIRNRDVMEQQGKN 663 Query: 428 -DMSLEEVINYASHRFSNNR 446 +S+EEV+ + R Sbjct: 664 ATVSVEEVLKQLRNLKDEKR 683 >gi|154509145|ref|ZP_02044787.1| hypothetical protein ACTODO_01666 [Actinomyces odontolyticus ATCC 17982] gi|153798779|gb|EDN81199.1| hypothetical protein ACTODO_01666 [Actinomyces odontolyticus ATCC 17982] Length = 602 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 2/276 (0%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S +FL L+E+P DAE+ SHKL++R G I + + GIY+WLPLG + L + I+REE + Sbjct: 5 LSTFFLRTLREDPADAEVNSHKLLVRAGYIRRSAPGIYTWLPLGLRTLRKIEDIVREEMD 64 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+ P L A+ + + R++ YG + +L DR + PTHEE+ T + + Sbjct: 65 AMGAQEVHFPGLIPAEPYKATNRWEEYGPTLFKLNDRKGGDYLLAPTHEEMFTLLVKDMY 124 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSFD+ EG SY +Y Sbjct: 125 SSYKDLPATLYQIQTKYRDEARPRAGLIRGREFVMKDAYSFDIDDEGLNASYQAERDTYE 184 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RIF RLGL+ + + A SG +GG S EF+ + GE S + T + Sbjct: 185 RIFQRLGLRYVIVSAMSGAMGGSRSEEFLHPSPIGEDTFVASPGGYAANAEAVTTPVPEA 244 Query: 243 ISLNSIVEQWTA--PYAATSDVHNEKLFDSLPENKR 276 + + P A T + + L D P R Sbjct: 245 QDASGVPAPLEVPTPDAPTIESLVDLLNDQYPREDR 280 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 61/187 (32%), Positives = 93/187 (49%), Gaps = 5/187 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ RGIE+GHIF G KY+ + T +GK V MG Sbjct: 410 GTIEAAEVREGDLAPDGSGPLHLERGIEIGHIFQLGRKYAKALGLTVLDENGKTQVVTMG 469 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG RV+AA+ E++ D KG+ WP +APF + ++ D+ + + + L Sbjct: 470 SYGIGVTRVMAALAEANCDDKGLSWPAQIAPFDVHVLATGKGDE-VFETAQSLGEELDAA 528 Query: 376 GCDVFWDD-MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV DD G +F +L+G P ++VG + ++D VEI+ R TG + +EE Sbjct: 529 GLDVLVDDRRKVSAGVKFKDYELVGVPFGLVVG-RSLADGDVEIRVRGTGETIVVPVEEA 587 Query: 435 INYASHR 441 + Sbjct: 588 VARLREL 594 >gi|327270906|ref|XP_003220229.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like [Anolis carolinensis] Length = 472 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 147/432 (34%), Positives = 227/432 (52%), Gaps = 41/432 (9%) Query: 21 ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW 80 S +LML G+I S G Y ++P +A++ + +I +E G +M++PTL SA LW Sbjct: 66 KSQRLMLLGGLICPASPGCYHYMPYAVRAMEKLIKVIDQEMQAIGGQKMNMPTLCSAKLW 125 Query: 81 VESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMT-DIFRSHIKSYRNLPFTFYQIQLKF 139 +SGR++ GKE+LR+ DR+ + GPTHEE +T I SY+ LP YQ+ KF Sbjct: 126 RDSGRWELMGKELLRMKDRHGQEYCLGPTHEEAITDLIASQGCLSYKQLPLLLYQVTRKF 185 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 RDE +PRFG++R REF MKD Y+FD + E + +Y + +Y IF+ LGL+ I ++A + Sbjct: 186 RDEPKPRFGLLRGREFYMKDMYTFDASKEAALQTYECVSNAYSNIFNNLGLQFIKVQAAT 245 Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 G IGG +SHEF + A+ GE Q+ + DF E + +++ Sbjct: 246 GSIGGTMSHEFQLPAEVGEDQLMMCANC-DFSANVETMNSNEMG---------------- 288 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 + + K + ++GIEVGH F+ GTKYS +AT A K +MG YG+ Sbjct: 289 ---------CPVCKGKLIESKGIEVGHTFFLGTKYSSVFNATVHTAQNKPVSAEMGCYGL 339 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA--HDQVCRDACEKIYA------- 370 G R++AA IE I WPD +AP+++ LI K +++ E++Y Sbjct: 340 GVSRILAASIEVLSTEDAIRWPDLIAPYQVCLIPPKKGSNEEKGAILLEELYDFISETVP 399 Query: 371 RLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKV-EIKHRLTGIRED 428 RL ++ DD IG + A+ LG+P +I G K + E+ ++ TG Sbjct: 400 RLKN---EMVLDDRTRLTIGKRLKDANKLGYPYVIIGGKKVFDKPSLFELHNQNTGEILF 456 Query: 429 MSLEEVINYASH 440 ++ E +I+ S Sbjct: 457 LTKEAIIDLLSK 468 >gi|302816173|ref|XP_002989766.1| hypothetical protein SELMODRAFT_447798 [Selaginella moellendorffii] gi|300142543|gb|EFJ09243.1| hypothetical protein SELMODRAFT_447798 [Selaginella moellendorffii] Length = 564 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 155/442 (35%), Gaps = 39/442 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + RD + L H+ S G +LP G + + IR E + G Sbjct: 158 YMTKYEEAKKRDHRLLGKNQQLF--FFHELSPGSAFFLPKGTIVYNKLLQFIRSEYRKRG 215 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW +SG Y + M + + + P + +F+ ++SY Sbjct: 216 FDEVVTPNIYNMKLWEQSGHAAHYKENMF-VFEIEKQEFGLKPMNCPGHCLLFQHRVRSY 274 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+EL G+ R R F DA+ F + + + Sbjct: 275 RELPLRIADFGVLHRNELSGALTGLTRVRRFSQDDAHIFCMESQVYDE-VKGCLDFLDYV 333 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++ + P D + + Sbjct: 334 YTIFGFTY-DLKLSTRPENF-----------------LGESSLWDRAEGALADALNAHAK 375 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D+ ++ D+L + + ++ F ++ L SA Sbjct: 376 PWQMNEGDGAFYGPKIDI---QVSDALNRKFQCATIQLD----FQSPIRFKLSYSAE--D 426 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + V + +G++ + A++ + GK W +++ + +D Sbjct: 427 EAKIERPVIIHRAILGSIERMFAILLEDNAGKWPFWLSPRQAIVLTI------SEKFKDY 480 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT- 423 E++ A+L G +V D ++ + A + + ++VG+ +V ++ R + Sbjct: 481 AEEVRAKLHAAGFEVDVDVSDRKVDKKVREAQMAHYNYLLVVGAMEQEKGEVNVRTRGSK 540 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G R +++E++I +N Sbjct: 541 GQRGCITIEKLIAEFQDLVANY 562 >gi|283458510|ref|YP_003363138.1| prolyl-tRNA synthetase [Rothia mucilaginosa DY-18] gi|283134553|dbj|BAI65318.1| prolyl-tRNA synthetase [Rothia mucilaginosa DY-18] Length = 624 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 114/317 (35%), Positives = 162/317 (51%), Gaps = 7/317 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S F+ L+E+P DAE+ASHKL++R G I + + G+Y+WLPLG K L V IIREE Sbjct: 18 RLSNLFVRTLREDPVDAEVASHKLLVRAGYIRRAAPGVYTWLPLGLKVLRKVENIIREEM 77 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ P L + + + R+D YG + RL DR M+ PTHEE+ T + + Sbjct: 78 DAIGAQEVHFPALLPREPYEATNRWDEYGDNLFRLKDRKGADMLLAPTHEEMFTLLVKDL 137 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSF++ EG +Y +Y Sbjct: 138 YSSYKDLPVYLYQIQTKYRDEARPRAGLLRGREFVMKDSYSFNIDDEGLNEAYMAHRAAY 197 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF RLGL+ + + A+SG +GG S EF+ GE S + + T + Sbjct: 198 QRIFERLGLEIVIVTAQSGAMGGSRSEEFLHPTPIGEDTFVRSAGGYAANVEAVTTVVPE 257 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I + P A D + ++L E + G I T T Sbjct: 258 EIEIT-----EDTPAAILVDTPDSATIETLVERMNELHTEVTGGAIEASQTL--KCFLGT 310 Query: 302 FKGADGKDHYVQMGSYG 318 G+ +G G Sbjct: 311 VITPSGERKVFAVGVPG 327 Score = 139 bits (351), Expect = 7e-31, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 96/189 (50%), Gaps = 5/189 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 + + D P+ + V+ARGIE+GHIF G KY+ + +GK V MG Sbjct: 436 GVIEACEVREGDPAPDGSGELVAARGIEMGHIFALGRKYAEALGLKVLDQNGKLQTVTMG 495 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R +AA+ E +HD KG+IWP ++AP + I I D + E++ A L Sbjct: 496 SYGVGVTRALAAIAEGNHDEKGLIWPRNLAPADVH-IVITGKDAASHEYAEELSASLESA 554 Query: 376 GCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G V DD + G +F A+LLG P +++G + D +E+K R +G ++S+E Sbjct: 555 GLQVMLDDRPKTSPGVKFGDAELLGVPTILVIG-RGFKDGVLELKDRRSGEAREVSVENA 613 Query: 435 INYASHRFS 443 + Sbjct: 614 VAEVIAEVR 622 >gi|78778982|ref|YP_397094.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Prochlorococcus marinus str. MIT 9312] gi|123755107|sp|Q31BT7|SYT_PROM9 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|78712481|gb|ABB49658.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Prochlorococcus marinus str. MIT 9312] Length = 638 Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 73/442 (16%), Positives = 134/442 (30%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD K L I + S G+ W P G + IRE + Sbjct: 231 YLTRIEEAEKRDHRKLGKKHSLF--HIQEESPGMIFWHPNGWTIYQVLEKYIREILKKND 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P LW +SG ++ + +M ++ P + +F +KSY Sbjct: 289 YLEIKTPQAVDKSLWEKSGHWEKFRDDMFT-TASENRTYAIKPMNCPCHIQLFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 ++LP + R+E G+MR R F DA+ F + + + + Sbjct: 348 KDLPIRLAEFGSCHRNEPSGALHGLMRVRNFTQDDAHIFCKEEQIQEE-VSTFIDLVFEV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ + P S E D + D+ Sbjct: 407 YKTFGFDEIIIKLSTRPEKRVGSEE-----------------IWDKSEEALTKALDNKNL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ AT+ Sbjct: 450 KWELQPGEGAFYGPKIEF---SLKDCLNRVWQCGTIQVDFSMPIRL--------EATYVD 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + + +G+ ++ ++ K IW +S+ + Sbjct: 499 IDNEKRNPVMLHRAILGSFERFIGILIEQYEAKFPIWLAPYQIILLSIT------DRNNE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C K ++ G D E+IG + A + PL ++G K V ++ Sbjct: 553 KCLKFNELINNNGYRSKVDIRNEKIGYKIREATISRIPLIAVIGDKEEEIDSVALRALDG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 +L + Sbjct: 613 TNLGIFNLPNLYKLMDELIDKK 634 >gi|291545263|emb|CBL18372.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Ruminococcus sp. 18P13] Length = 646 Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 73/447 (16%), Positives = 152/447 (34%), Gaps = 36/447 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L L+E RD +L L T + +G+ LP G + + + + +E+ R Sbjct: 230 EAYLKQLEEAKLRDHNKLGRELELFTT-VDCIGQGLPIMLPKGARVIQLLQRFVEDEEQR 288 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSH 121 G + P + +DL+ SG +D Y + M +++ + P +F + Sbjct: 289 RGYLLTKTPLMAKSDLYKISGHWDHYKEGMFVLGDEEKDKEVFALRPMTCPFQYQVFLNR 348 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SYR+LP + FR+E G++R R+F + + + + Sbjct: 349 PRSYRDLPMRLGETSTLFRNEDSGEMHGLIRVRQFTISEGHLILRPEQLEDEF------- 401 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 R L+ + + D+++ F + + + D + D Sbjct: 402 ------RGCLELANYMLTTLGLADDVTYRFSQWDPNNTEKYIGTPEQWDEAQGAMKKILD 455 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + +I A Y D+ + + + + I+ FG Sbjct: 456 HLGIHYTIGIDEAAFYGPKLDIQIKNVH---GKEDTLITIQIDQMLAQLFG--------M 504 Query: 301 TFKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + DG + +G A++ + G +W I + Sbjct: 505 EYTDVDGTKRRPYIIHRTSLGCYERTLALLIEKYAGAFPLWLAPEQVKLIPIA------D 558 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ +L G + DD E++G + A L P + +G V V ++ Sbjct: 559 RHMDYTLELARKLEAAGMRITVDDRAEKVGYKIRQAVLEKVPYMLTIGDNEVESKTVSVR 618 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 R G M+ + ++ + + Sbjct: 619 SRRDGDLGSMTQDALLAKLVEEVATKK 645 >gi|227829326|ref|YP_002831105.1| threonyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15] gi|259516733|sp|C3MKT5|SYT_SULIL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|227455773|gb|ACP34460.1| threonyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15] Length = 545 Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 154/443 (34%), Gaps = 39/443 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + D + KL L + + G+ + P GQ + + A +RE + G Sbjct: 128 YLTWLEKAEETDHRLIGEKLDLFSFH-EEAGSGLVLFHPKGQTIRNELIAFMREINDSMG 186 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ + D+W SG Y Y +++ + + P + I++S ++Y Sbjct: 187 YQEVYTSHVFKTDIWKISGHYTLYRDKLI-VFNMEGDEYGVKPMNCPAHILIYKSKPRTY 245 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F + +R E + +G++R R F+ D + F + + + + Sbjct: 246 RDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIFLREDQLREEIKMLISKTVEVW 305 Query: 185 FHR-LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I + P S E + + + + Sbjct: 306 HKFGFKDDDIKPYLSTRPDESIGSDE-----------------LWEKATNALISALQESG 348 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E+ A Y D ++ DSL ++S ++ F ++ + Sbjct: 349 LKFGIKEKEGAFYGPKIDF---EIRDSLGRWWQLSTIQVD----FNLPERF----KLEYI 397 Query: 304 GADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG K V + G++ A++ GK W ++ ++ ++ I Sbjct: 398 DKDGIKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTW---LSSVQVRVLPIT---DEVN 451 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + EK+ + K D GE + + A G P +IVG K S+ V ++ R Sbjct: 452 EYAEKVLNDMRKRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARG 511 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 ++ E+ + + Sbjct: 512 NIEVRNVKFEKFLELLITEIAQR 534 >gi|332885366|gb|EGK05615.1| threonyl-tRNA synthetase [Dysgonomonas mossii DSM 22836] Length = 650 Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 84/444 (18%), Positives = 151/444 (34%), Gaps = 38/444 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD +L L KG+ WLP G + + +++ Q + Sbjct: 230 EYLVMLEEAKKRDHRKIGKELELFA-FSENVGKGLPLWLPRGTQLRLKLEDFLKKIQKKF 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 ++ P + S L+V SG Y YG++ + + + P + +I++ Sbjct: 289 EYQQVMTPHIGSKLLYVTSGHYAKYGQDSFQPIHTPEEGEEFLLKPMNCPHHCEIYKIVP 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP + +R E G+ R R F DA+ F TPE K + K+ Sbjct: 349 RSYRDLPLRMAEFGTVYRYEQSGELHGLTRVRGFTQDDAHIFC-TPEQLKEEFLKVMDIV 407 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 IF L ++ + D + + D + + Sbjct: 408 FIIFKALNFENFEAQISLR--------------DPNNREKYIGSDANWEKAERAIIEACE 453 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + VE A Y D + D+L ++ ++ Sbjct: 454 EKGLPARVELGEAAFYGPKLDFM---VKDALGRRWQLGTIQVDYNLP--------ERFEL 502 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GAD + H + G+M AV+ GK +W + I + Sbjct: 503 EYTGADNQKHRPVMIHRAPFGSMERFIAVLIEHTAGKFPLW------LAPDQVVILPISE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ + G DD E+IG + +L P +IVG K +V I+ Sbjct: 557 KFNDYAHRVSHYFKQQGISSQVDDRNEKIGRKIRDNELKRIPYLLIVGEKEAESEEVSIR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFS 443 + G + M + Sbjct: 617 KQGDGDKGSMKFVNFAAQLNEEME 640 >gi|229583844|ref|YP_002842345.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.16.27] gi|259516679|sp|C3N1B5|SYT_SULIA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|228018893|gb|ACP54300.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.16.27] gi|323476419|gb|ADX81657.1| threonyl-tRNA synthetase [Sulfolobus islandicus HVE10/4] Length = 545 Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 154/443 (34%), Gaps = 39/443 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + D + KL L + + G+ + P GQ + + A +RE + G Sbjct: 128 YLTWLEKAEETDHRLIGEKLDLFSFH-EEAGSGLVLFHPKGQTIRNELIAFMREINDSMG 186 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ + D+W SG Y Y +++ + + P + I++S ++Y Sbjct: 187 YQEVYTSHVFKTDIWKISGHYTLYRDKLI-VFNMEGDEYGVKPMNCPAHILIYKSKPRTY 245 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F + +R E + +G++R R F+ D + F + + + + Sbjct: 246 RDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIFLREDQLREEIKMLISKTVEVW 305 Query: 185 FHR-LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I + P S E + + + + Sbjct: 306 HKFGFKDDDIKPYLSTRPDESIGSDE-----------------LWEKATNALISALQESG 348 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E+ A Y D ++ DSL ++S ++ F ++ + Sbjct: 349 LKFGIKEKEGAFYGPKIDF---EIRDSLGRWWQLSTIQVD----FNLPERF----KLEYI 397 Query: 304 GADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG K V + G++ A++ GK W ++ ++ ++ I Sbjct: 398 DKDGIKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTW---LSSVQVRVLPIT---DEVN 451 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + EK+ + K D GE + + A G P +IVG K S+ V ++ R Sbjct: 452 EYAEKVLNDMRKRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARG 511 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 ++ E+ + + Sbjct: 512 NIEVRNVKFEKFLELLITEIAQR 534 >gi|284996685|ref|YP_003418452.1| threonyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5] gi|284444580|gb|ADB86082.1| threonyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5] Length = 545 Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 76/443 (17%), Positives = 152/443 (34%), Gaps = 39/443 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + D + KL L + + G+ + P GQ + + A +RE + G Sbjct: 128 YLTWLEKAEETDHRLIGEKLDLFSFH-EEAGSGLVLFHPKGQTIRNELIAFMREINDSMG 186 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ + D+W SG Y Y +++ + + P + I++S ++Y Sbjct: 187 YQEVYTSHVFKTDIWKISGHYTLYRDKLI-VFNMEGDEYGVKPMNCPAHILIYKSKPRTY 245 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F + +R E + +G++R R F+ D + F + + + + Sbjct: 246 RDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIFLREDQLREEIKMLISKTVEVW 305 Query: 185 FHR-LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I + P S E + + + + Sbjct: 306 HKFGFKDDDIKPYLSTRPDESIGSDE-----------------LWEKATNALISALQESG 348 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E+ A Y D ++ DSL ++S ++ F ++ + Sbjct: 349 LKFGIKEKEGAFYGPKIDF---EIRDSLGRWWQLSTIQVD----FNLPERF----KLEYI 397 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG + G++ A+I GK W ++ ++ ++ I Sbjct: 398 DKDGIKKRPVMVHRAIYGSIDRFVAIILEHFKGKLPTW---LSSVQVRVLPIT---DEVN 451 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + EK+ + K D GE + + A G P +IVG K S+ V ++ R Sbjct: 452 EYAEKVLNDMRKRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARG 511 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 ++ E+ + + Sbjct: 512 NIEVRNVKFEKFLELLITEIAQR 534 >gi|224099691|ref|XP_002311580.1| predicted protein [Populus trichocarpa] gi|222851400|gb|EEE88947.1| predicted protein [Populus trichocarpa] Length = 678 Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 75/446 (16%), Positives = 156/446 (34%), Gaps = 38/446 (8%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R +Y + + D + K L H S G + +LP G + + + I++E Sbjct: 270 RLQEYKQFLEEAKKYDHRLLGIKQELF--FCHPLSPGSWFFLPHGTRVYNKLMQFIKDEY 327 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ P + + LW SG +Y + M L + ++ P + +F+ Sbjct: 328 RKRGYEEVKSPNIFNMKLWETSGHAANYKENMF-LLEIENQEFGLKPMNCPGHCLMFQHR 386 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP R+E G+ R R F DA+ F + + Sbjct: 387 VRSYRELPLRLADFGALHRNEASGALTGLTRVRRFQQDDAHIFCRKSQIKDE-VRGVLEF 445 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + + G ++ + P + + D + D Sbjct: 446 IDYTYGKFGFTY-ELKLSTRP-----------------EKYLGVLETWDEAEKALTEALD 487 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I E A Y D+ + D+L + + ++ F ++ L SA Sbjct: 488 EFGKPWKIDEGDGAFYGPKIDI---SVSDALKRKFQCATLQLD----FQLPDRFKLEYSA 540 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + V + +G++ + A++ + WP ++P + + + Q Sbjct: 541 E--DEARSEAPVMIHRAILGSVERMFAILL---EHYKGKWPFWLSPRQAIVCPVSEKSQS 595 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ++ ++ + G V D +I + A L + ++VG + +V ++ Sbjct: 596 ---YALQVRDQIHEAGYYVDVDATDRKIQKKVREAQLAQYNYILVVGEEESKTGQVSVRV 652 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R MS+E ++ ++ R Sbjct: 653 RDNADHSVMSIESLLGLFKELVADFR 678 >gi|124516423|gb|EAY57931.1| Threonyl-tRNA synthetase [Leptospirillum rubarum] Length = 617 Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 79/438 (18%), Positives = 146/438 (33%), Gaps = 42/438 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +E R D +L L + + G+ WLP G + + + + +R G Sbjct: 203 YLRQQEEIQRRDHRKLGRELGLFRTLDEK-GAGLVLWLPRGSQIRRTLEELWKILHDRHG 261 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + DLW++SG +D Y M R + A P + IFR ++SY Sbjct: 262 YRYVYTPHIARLDLWMQSGHWDYYQDSMFRPMETEGTAYELKPMNCPFHILIFRESVQSY 321 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ +R E G+MR R F DA+ F + + + ++ Sbjct: 322 RDLPIRLSELGTVYRYERSGTLHGLMRVRGFTQDDAHIFYPPEDLAGE-IRNVLALVDQM 380 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 R G + + P S E + S ++ Sbjct: 381 IGRFGFTDRTVYLSTRPEKSVGSDE-----------------NWEMATGSLRRALEESGI 423 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + Y D+ K D++ ++S ++ F K+ T++ Sbjct: 424 PYEVDPGEGVFYGPKIDI---KFHDAIGRAWQLSTIQVD----FNLPEKFD----LTYRN 472 Query: 305 ADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G+ M + R +IE + Sbjct: 473 DSGEPCRPIMIHRALFGSIERFFGILIEHYAGAFPLWLAPEQVRIMTIA-------DRHI 525 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + + RL G D E+IG + A + P +VG + V +++V ++ R Sbjct: 526 PYAQTVLNRLKDRGVRAEGDFRNEKIGFKVREAQMAKIPEMWVVGDREVEENRVSVRTRE 585 Query: 423 TGIREDMSLE-EVINYAS 439 ++ LE E+ + Sbjct: 586 GEKKDLRPLESELEDLFR 603 >gi|315924324|ref|ZP_07920547.1| threonine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263] gi|315622395|gb|EFV02353.1| threonine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263] Length = 644 Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 71/443 (16%), Positives = 144/443 (32%), Gaps = 37/443 (8%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + + G+ WLP G K + + R+E + G Sbjct: 231 LAKLEEAQKRDHRKLGPQLDLF--FLDDTAPGMPYWLPKGWKLFNTLLEFWRDEHEKRGY 288 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+S P + LW +SG +D Y M + ++ P + +++ +SYR Sbjct: 289 QEISSPQINYNKLWRQSGHWDHYKDNMFVIPVSENEIYGVKPMNCPNAIVVYKRKTRSYR 348 Query: 127 NLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 +LP + R E + + + +D +T + N++ + Sbjct: 349 DLPLRLSDCDVLHRKEKSGQLHGLLRVQMFRQDDSHNFITEDQIYDEINEILDIADLFYG 408 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 GL+ + P A+ ++ + Sbjct: 409 IFGLEY-RPELSTRPADFMGDIALWDKAEAALKEILDKRYGE---------------GGY 452 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 + E A Y D+ + D+L ++ ++ F + T+ D Sbjct: 453 DVNEGDGAFYGPKIDIM---MKDALDRTWQMGTIQVD----FQLPRNFD----LTYMDKD 501 Query: 307 GK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 G+ V + G++ ++ S GK W + I + + Sbjct: 502 GELKVPVMIHRVIYGSLERFIGLLIESTAGKFPFW------LSPVQVGIVPVREFHNEYA 555 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 + I +L V DD Q+G + + P +IVG K + V ++ R Sbjct: 556 QSIADQLRDHRIRVEVDDRDAQMGGKISKFRKELLPYILIVGDKEKEANAVSVRIRDGVQ 615 Query: 426 REDMSLEEVINYASHRFSNNRPV 448 D+ ++ + + R + Sbjct: 616 LHDIPVDAFL-KVVDVMNKKREL 637 >gi|312901397|ref|ZP_07760674.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0470] gi|311291473|gb|EFQ70029.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0470] Length = 626 Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 71/405 (17%), Positives = 148/405 (36%), Gaps = 34/405 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 F+ + +E RD +L L M+ + G+ WLP G + I +++ Sbjct: 252 FIKMREEAKERDHRKLGKELDLF--MVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISL 309 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIK 123 G + P + +L+ SG +D Y ++M D D M + P + ++++ I Sbjct: 310 GYQHVYTPIMADVELYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIH 369 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP ++ + R E ++ + + + P+ K + + + Sbjct: 370 SYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA 429 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTDFDDI 242 ++ + R D T + D M + D++ Sbjct: 430 VYADFNITDYRFRLS--------------YRDPNNTDKYFDDDAMWEKAQAMLKAAMDEL 475 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y DV ++ +L + +S ++ F ++ T+ Sbjct: 476 ELDYFEAEGEAAFYGPKLDV---QVKTALGMEETLSTIQLD----FLLPERFD----LTY 524 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG++ + + + G + + + + +P +AP + ++I + + Sbjct: 525 VGEDGENTHRPVVIHR-GIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSV--EAHS 581 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + +I RL G V DD E++G + + P Q++VG Sbjct: 582 EYAYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKVPYQLVVG 626 >gi|269956006|ref|YP_003325795.1| prolyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894] gi|269304687|gb|ACZ30237.1| prolyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894] Length = 607 Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 100/245 (40%), Positives = 143/245 (58%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S F+ L+E+P DAE+ASH+L++R G I + + GIY+WLPLG + L V AI+REE Sbjct: 12 RLSSLFVRTLREDPADAEVASHRLLIRAGYIRRAAPGIYTWLPLGLRVLAKVEAIVREEM 71 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G E+ P L + + +GR++ YG + RL DR + PTHEE+ T + + Sbjct: 72 AAIGGQEVHFPALLPREPYEATGRWEEYGPNLFRLQDRKRADYLLAPTHEEMFTLLVKDL 131 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T +QIQ K+RDE RPR G++R REF+MKD+YSFD T G +Y + +Y Sbjct: 132 YSSYKDLPLTLFQIQTKYRDEARPRAGLIRGREFVMKDSYSFDHTDAGLDEAYQRHRDAY 191 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF RLGL + + A SG +GG S EF+ + GE S + + T + Sbjct: 192 ERIFTRLGLDYVIVSAMSGAMGGSRSEEFLSPSVIGEDTFVRSPGGYAANVEAVITPVPE 251 Query: 242 IISLN 246 I + Sbjct: 252 AIGYD 256 Score = 95.2 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 53/177 (29%), Positives = 82/177 (46%), Gaps = 21/177 (11%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ ARGIE+GHIF G KY+ + +GK V MG Sbjct: 418 GTIEAAEVRAGDPAPDGSGPLELARGIEMGHIFQLGRKYAEALGLKVLDENGKAVTVTMG 477 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R +AA+ E++HD +G+ WP VAP + ++ +V A E + L Sbjct: 478 SYGIGVTRALAALAEANHDERGLAWPAHVAPAHVHVVATGRGAEVFDAAAE-LAEGLVAN 536 Query: 376 GCDVFWDDM-GEQIGSQFAVAD--------LLGFPLQVIVGSKFVSDSKVEIKHRLT 423 G +V +DD G +FA A+ ++ + ++D VE++ R Sbjct: 537 GVEVVYDDRPKVSPGVKFADAELLGVPLLVVV---------GRGLADGVVEVRPRAG 584 >gi|119513050|ref|ZP_01632106.1| threonyl-tRNA synthetase [Nodularia spumigena CCY9414] gi|119462292|gb|EAW43273.1| threonyl-tRNA synthetase [Nodularia spumigena CCY9414] Length = 602 Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 74/441 (16%), Positives = 152/441 (34%), Gaps = 39/441 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD +L L Q G+ W P G + +++EQ + G + + Sbjct: 190 EEALRRDHRKLGKELGLFI-FSEQVGPGLPLWTPKGTLLRSVLEDFLKKEQLKRGYLPVV 248 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKA------MIYGPTHEEVMTDIFRSHIKS 124 P + DL+ SG + Y ++M L +++A + P + I++S ++S Sbjct: 249 TPHIARVDLFKTSGHWQKYKEDMFPLMSDDEEAAALEQGFVLKPMNCPFHIQIYKSELRS 308 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR LP + +R E G + D +TPE + + L + Sbjct: 309 YRELPIRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDSEFLNVVDLILSV 368 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F L LK+ R D + S + D + + + Sbjct: 369 FKSLQLKNFKARLS--------------FRDPASDKYIGSNEVWDKAEGAIRRAVEKLGM 414 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y D D+L ++ ++ + Sbjct: 415 NYFEGIGEAAFYGPKLDFI---FSDALEREWQLGTVQVDYNLP--------ERFDLEYVA 463 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + G++ + ++ + +P +AP + L+ + + D Sbjct: 464 EDGSRQRPVMIHRAPFGSLERLIGILI---EEYAGDFPLWLAPVQARLLPVG---EAQLD 517 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + A++ G D G+++G A+ P+ ++G+K V + + I+ R + Sbjct: 518 FAKDVAAKMVAEGIRAEVDTSGDRLGKIIRNAEKQKIPVMAVIGAKEVESNSLSIRTRAS 577 Query: 424 GIREDMSLEEVINYASHRFSN 444 G + ++EV++ +N Sbjct: 578 GELGAIPVDEVVDKMKQAIAN 598 >gi|28212194|ref|NP_783138.1| prolyl-tRNA synthetase [Clostridium tetani E88] gi|81841121|sp|Q890M2|SYP_CLOTE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|28204638|gb|AAO37075.1| prolyl-tRNA synthetase [Clostridium tetani E88] Length = 570 Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 117/293 (39%), Positives = 167/293 (56%), Gaps = 6/293 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+E P +AEI SHKLMLR GM+ + + G+Y+++P G + + + I+REE Sbjct: 1 MKLSNMLVSTLREVPAEAEIPSHKLMLRAGMMRKMASGVYNFMPFGLRVIKKIEDIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E L ++LW ESGR+D +G EM RL DRN++ GPTHEEV TDI R+ Sbjct: 61 MDNAGAQEFLASALLPSELWKESGRWDVFGPEMFRLQDRNNREFCLGPTHEEVFTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPRFG+MRSREF+MKDAYSFD E SY KM+ + Sbjct: 121 EINSYKQLPLNLYQIQTKYRDERRPRFGLMRSREFIMKDAYSFDKDYEDLDVSYKKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL+ + A+SG +GG S EF+V ++ GE ++ + + Sbjct: 181 YHNIFIRCGLECNCVEADSGAMGGAGSAEFMVKSEVGEDEIAFCDSC------GYGANIE 234 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 +++ +Q A + N K D L + ++ + I+ K Sbjct: 235 KAPAISEKFDQEELKELAKIETPNVKTIDQLIKFLEINPAKLVKTLIYKVDDK 287 Score = 170 bits (431), Expect = 4e-40, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 104/211 (49%), Gaps = 3/211 (1%) Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKY 294 ++ D D P ARGIEVGHIF GTKY Sbjct: 357 IGANETGYHYKNANYKRDFEGIVGDYRKVIQGDKCPLCGGNIEIARGIEVGHIFKLGTKY 416 Query: 295 SLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 S M A F G+ + MG YGIG R +AA IE +HD GI+WP S+AP+ + ++ + Sbjct: 417 SESMGANFLDEKGESRPLVMGCYGIGVSRTMAAAIEQNHDENGIVWPLSIAPYHVIVVPV 476 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 D+ A E+IY +L +G +V DD E+ G +F ADL+G P++V VG K + + Sbjct: 477 ITKDEEQMKAAEEIYNKLKSMGVEVLLDDRAERPGVKFKDADLIGIPIRVTVGKK-IKEG 535 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 KVE K R E +++E+V + F + Sbjct: 536 KVEYKLRKEEDLEILNIEQVYDKVREEFEKS 566 >gi|323473769|gb|ADX84375.1| threonyl-tRNA synthetase [Sulfolobus islandicus REY15A] Length = 545 Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 75/443 (16%), Positives = 152/443 (34%), Gaps = 39/443 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + D + KL L + + G+ + P GQ + + A +RE + G Sbjct: 128 YLTWLEKAEETDHRLIGEKLDLFSFH-EEAGSGLVLFHPKGQTIRNELIAFMREINDSMG 186 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ + D+W SG Y Y +++ + + P + I++S ++Y Sbjct: 187 YQEVYTSHVFKTDIWKISGHYTLYRDKLI-VFNMEGDEYGVKPMNCPAHILIYKSKPRTY 245 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F + +R E + +G++R R F+ D + F + + + + Sbjct: 246 RDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIFLREDQLREEIKMLISKTVEVW 305 Query: 185 FHR-LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I + P S E + + + + Sbjct: 306 HKFGFKDDDIKPYLSTRPDESIGSDE-----------------LWEKATNALISALQESG 348 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E+ A Y D ++ DSL ++S ++ F ++ + Sbjct: 349 LKFGIKEKEGAFYGPKIDF---EIRDSLGRWWQLSTIQVD----FNLPERF----KLEYI 397 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG + G++ A++ GK W ++ ++ ++ I Sbjct: 398 DKDGIKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTW---LSSVQVRVLPIT---DEVN 451 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + EK+ + K D GE + + A G P +IVG K S+ V ++ R Sbjct: 452 EYAEKVLNDMRKRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARG 511 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 ++ E+ + + Sbjct: 512 NIEVRNVKFEKFLELLITEIAQR 534 >gi|27467857|ref|NP_764494.1| prolyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228] gi|57866745|ref|YP_188412.1| prolyl-tRNA synthetase [Staphylococcus epidermidis RP62A] gi|251810694|ref|ZP_04825167.1| prolyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060] gi|282876305|ref|ZP_06285172.1| proline--tRNA ligase [Staphylococcus epidermidis SK135] gi|293366773|ref|ZP_06613449.1| proline-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|81175026|sp|Q8CST7|SYP_STAES RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|81175027|sp|Q5HPS8|SYP_STAEQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|27315402|gb|AAO04536.1|AE016747_33 proline-tRNA ligase [Staphylococcus epidermidis ATCC 12228] gi|57637403|gb|AAW54191.1| prolyl-tRNA synthetase [Staphylococcus epidermidis RP62A] gi|251805854|gb|EES58511.1| prolyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060] gi|281295330|gb|EFA87857.1| proline--tRNA ligase [Staphylococcus epidermidis SK135] gi|291319074|gb|EFE59444.1| proline-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|329736329|gb|EGG72601.1| proline--tRNA ligase [Staphylococcus epidermidis VCU028] gi|329736632|gb|EGG72898.1| proline--tRNA ligase [Staphylococcus epidermidis VCU045] Length = 567 Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 128/366 (34%), Positives = 191/366 (52%), Gaps = 6/366 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P ++E P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N++ IIREE Sbjct: 1 MKQSKVFIPTMREVPAEAEALSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNISKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T + R Sbjct: 61 MESIDAVEILMPALQQAELWEESGRWSAYGPELMRLKDRNGREFALGPTHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ K+RDE RPRFG++R REFLMKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPLTLFQIQSKYRDEKRPRFGLLRGREFLMKDAYSFHSDEASLDATYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+G+ + P+ A+SG IGG +HEF+ L++ GE + + D+ E + Sbjct: 181 YSRIFKRVGINARPVVADSGAIGGSHTHEFMALSEIGEDTIVY-SNESDYAANIEKAEVV 239 Query: 241 DIISLNSIV----EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 S + P T+ E L L E + I+ I + + Sbjct: 240 YHPSHKHSALAELTKVETPNVKTAQEVAEYLKRPLDEIVKTMIFKIDGEFIMFLVRGHHE 299 Query: 297 PMSATFKGADGKDHYVQMGS-YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 K G +H + + + D I+ D+ + + Sbjct: 300 LNEVKLKSYFGTEHVEMATPDEIVNLVDANPGSLGPIFDKDIKIYADNYLQDLNNFVVGA 359 Query: 356 AHDQVC 361 D Sbjct: 360 NEDHYH 365 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 67/166 (40%), Positives = 99/166 (59%), Gaps = 2/166 (1%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E ++D GIIW Sbjct: 404 GIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGVSRTLSAIVEQNNDENGIIW 463 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P SV PF I LI I R +++Y +L DV +DD E+ G +F +DL+G Sbjct: 464 PKSVTPFDIHLITINPKKDDQRTLGDQLYQKLMDS-YDVLYDDRKERAGVKFNDSDLIGL 522 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 P++V+VG + + VE+K R+ G+ E++ ++E+ Y F N + Sbjct: 523 PVRVVVGKR-AEEGIVEVKQRINGLSEEVQIDELEYYLQELFKNIK 567 >gi|213964749|ref|ZP_03392949.1| prolyl-tRNA synthetase [Corynebacterium amycolatum SK46] gi|213952942|gb|EEB64324.1| prolyl-tRNA synthetase [Corynebacterium amycolatum SK46] Length = 590 Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 121/386 (31%), Positives = 172/386 (44%), Gaps = 21/386 (5%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+E+P DAE+ SHKL++R G I + + G+YSWLPLG K L NV ++REE Sbjct: 4 RMSQLFLRTLREDPADAEVPSHKLLVRAGYIRRTAPGVYSWLPLGLKVLRNVEKVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA E++ P L + + + R+ YG E+ RL DR + GPTHEE+ + Sbjct: 64 EGIGAQELAFPALLPREPYEATNRWTEYGPELFRLKDRKGADYLLGPTHEEMFALAVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T +QIQ K+RDE RPR G++R REF+MKD+YSFD+ EG ++SY + +Y Sbjct: 124 FSSYKDFPTTLFQIQTKYRDEARPRAGILRGREFVMKDSYSFDMDDEGLENSYQQHRGAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF RLG+K A SG +GG S EF+ +++ GE S D ++ E Sbjct: 184 QRIFDRLGIKYEICHATSGAMGGSASEEFLAVSENGEDSFVVSTDG-EYAANVEAVKIPA 242 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + P A + N +L + + G EV Sbjct: 243 VEPQPI----EGQPEAKVYESPNCTTIAALVDWANGADLGREVTAADTLKCVLVAVDPKK 298 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G D + VA ++ D Sbjct: 299 VDKEGNALPEQLTAILVPG-------------DREVDEKRLEVAFEPGEARLLEDKDFAA 345 Query: 362 RDACEKIY---ARLSKVGCDVFWDDM 384 D K Y L+ G V D Sbjct: 346 NDFLIKGYVGPQGLADRGVKVLADPR 371 Score = 126 bits (317), Expect = 6e-27, Method: Composition-based stats. Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 5/216 (2%) Query: 232 IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFY 289 ++ + +V DV + D PE RGIE+GHIF Sbjct: 376 TNWITGANEEGKHIVDVVAGRDFQIDGICDVAEVRDGDPAPEGHGTLKIERGIEIGHIFQ 435 Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 G KY+ +GK MGSYGIG R+VA + E D KG+ WP + AP+K+ Sbjct: 436 LGRKYTNAFEIDILDVNGKRARPTMGSYGIGVSRLVAVLAEQQLDEKGLKWPVAAAPYKV 495 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGS 408 + + + A + LS+ G +V +DD G +F A+LLG P VI G Sbjct: 496 HIAVAGKNAEAAEAAEQL-AEDLSQQGIEVLFDDRPKVSPGVKFKDAELLGMPFVVIFG- 553 Query: 409 KFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 + +D KVE+++RLT ++++ + + + + S Sbjct: 554 RGYADGKVELRNRLTNETDEVAADGIAAHVAELVSK 589 >gi|309364909|emb|CAP23504.2| CBR-TARS-1 protein [Caenorhabditis briggsae AF16] Length = 729 Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 71/433 (16%), Positives = 147/433 (33%), Gaps = 43/433 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L HQ S G W P G + + IR++ R G E+ Sbjct: 319 EEAAKRDHRKLGKEQDLF--FFHQLSPGSAFWYPKGAHIYNKLVDFIRKQYRRRGFTEVI 376 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + + LW SG + Y ++M + + + P + +F +Y LPF Sbjct: 377 TPNMYNKKLWETSGHWQHYSEDMFK-IEVEKEEFGLKPMNCPGHCLMFGHMPHTYNELPF 435 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F + R+E+ G+ R R F DA+ F + S+ + + ++ Sbjct: 436 RFADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCRQDQISEE-IKQCLDFLEYAYEKVF 494 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + + P G E D + ++ Sbjct: 495 GFTFKLNLSTRPEGFLGKIE-----------------TWDQAEADLTEALNATGRKWALN 537 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L N + + ++ F ++ ++ G+ Sbjct: 538 PGDGAFYGPKIDI---TIQDALKRNFQCATIQLD----FQLPNQFD----LSYFDEKGEK 586 Query: 310 HYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 M + R+ A + ES + RD + Sbjct: 587 QRPVMIHRAVLGSVERMTAILTESYGGKWPFWLSPRQCKIITV-------HESVRDYAKD 639 Query: 368 IYARLSKVGCDVFWDD-MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + ++ G +V +D+ G+ + Q + L F +++G+K + V ++ R +R Sbjct: 640 VKKQIFDAGFEVEYDEFCGDTMNKQVRNSQLAQFNFILVLGAKEKENGTVNVRTRDNAVR 699 Query: 427 EDMSLEEVINYAS 439 ++ +E++++ Sbjct: 700 GEVPIEKLLSKFR 712 >gi|19112749|ref|NP_595957.1| mitochondrial proline-tRNA ligase (predicted) [Schizosaccharomyces pombe 972h-] gi|74676105|sp|O74765|SYPM_SCHPO RecName: Full=Probable prolyl-tRNA synthetase, mitochondrial; AltName: Full=Proline--tRNA ligase; Short=ProRS; Flags: Precursor gi|3687477|emb|CAA21147.1| mitochondrial proline-tRNA ligase (predicted) [Schizosaccharomyces pombe] Length = 425 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 135/418 (32%), Positives = 208/418 (49%), Gaps = 29/418 (6%) Query: 24 KLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVES 83 +L++ G I GI+ +LPLG + + + ++ GA +S+ L S ++W +S Sbjct: 29 QLLIDMGFIQPSMPGIFQYLPLGLRVQNKICDLLHISMRSLGASAISLAHLSSKEIWEKS 88 Query: 84 GRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDEL 143 GR+ G E+ RL DRND+ M PTHEE +T + I S + LP YQI KFRDEL Sbjct: 89 GRWQKTGSELFRLHDRNDREMCLAPTHEEDVTRTMATIIDSQKQLPIRVYQIGRKFRDEL 148 Query: 144 RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG 203 RPR G++R REF+MKD Y+FD+ + +Y + +Y F +GL + ++A +G IG Sbjct: 149 RPRGGLLRGREFMMKDLYTFDIDKASAMKTYEDVLQAYHTFFKEVGLPFVMVKAATGNIG 208 Query: 204 GDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVH 263 G+LSHEF GE ++ + SE D S Sbjct: 209 GNLSHEFHYRHPVGEDVIYTCPSCH-YSTNSEMLDLSKTSS------------------- 248 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 + ++ S IEVGH FY G YS +AT + K + MG YGIG R Sbjct: 249 --DISCPNCNDQLTSTTAIEVGHAFYLGKIYSSKFNATVE-VKNKQEVLHMGCYGIGVSR 305 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK-VGCD-VFW 381 ++AAV + D KG++WP S+AP+K+ ++ + + E +Y + VG D V Sbjct: 306 LIAAVAHVTKDAKGLVWPSSIAPWKVLVVPTSDNH---IQSAETVYDATANVVGFDNVLL 362 Query: 382 DDMGEQI-GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 +D + G + A+L+G+P ++VGS+F + EI R +G R + + + Sbjct: 363 EDRQNRAFGYKMRDAELIGYPFVIVVGSRFQEEGICEIIVRSSGERYKLDKDSLHQVL 420 >gi|268678723|ref|YP_003303154.1| threonyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946] gi|268616754|gb|ACZ11119.1| threonyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946] Length = 605 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 76/441 (17%), Positives = 151/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD ++L L T + G+ WLP G K + ++ + G Sbjct: 200 YVTMIEEAKKRDHRKIGNELKLFT-FDDEVGAGLPIWLPQGGKLRAKLEKLLFTAHRKRG 258 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D W SG Y +YG+ M ++ P + +F+S ++SY Sbjct: 259 YQPVRGPEILKSDAWKISGHYQNYGENM-YFTVIDEAEYGIKPMNCLGHIKVFQSEVRSY 317 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F++ + R E G+ R REF DA+ F TP+ K + ++ I Sbjct: 318 RDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFC-TPDQIKENVLEILSFVDSI 376 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G T + + + + D+ Sbjct: 377 MKTFGFHYEMEI------------------STRPEKSIGDERYWEAATQGLKNALDENGI 418 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + ++ F ++ ++ Sbjct: 419 TYGIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVD----FNLPERFD----ISYVD 467 Query: 305 ADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 A+ + V + +G+ ++ + + + I + Sbjct: 468 ANNEHARPVMLHRAILGSFERFIGILIEHT------SGEFPFFLAPTQVVIVPISDAHLE 521 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L DV E + + A+ + P+ +++G V + V ++ R Sbjct: 522 YAKSVANALMAEEIDVEVSSKNESLNKRIRNAETMRVPMILVIGDAEVENQSVAVRDRRE 581 Query: 424 GIREDMSLEEVINYASHRFSN 444 + ++S E+I + S Sbjct: 582 RTQYNLSKVELIKTLKEKLSE 602 >gi|225461914|ref|XP_002265484.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 745 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 75/441 (17%), Positives = 156/441 (35%), Gaps = 38/441 (8%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R +Y I + D + K L H S G + +LP G + + + I+ + Sbjct: 337 RLKEYIARIEEAKKYDHRLLGVKQELF--FCHPLSPGSWFFLPHGGRIYNKLMEFIKAQY 394 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G E+ PT+ + LW SG +Y + M + + + P + +F Sbjct: 395 RERGYHEVFSPTMYNMQLWETSGHAANYKENMF-VFEVEKQEFGLKPMNCPGHCLMFEHR 453 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP + R+E G+ R R F DA+ F K + Sbjct: 454 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCR-ESQIKDEVMGVLDF 512 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++ G ++ + P + + + + + Sbjct: 513 INYAYNIFGFTYE-LKLSTRP-----------------EKYLGDLETWEKAEAALTEALN 554 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I E A Y D+ + D+L + + ++ F +++ L SA Sbjct: 555 QSGKPWEINEGDGAFYGPKIDI---SVSDALNRKFQCATLQLD----FQLPSRFDLSYSA 607 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 ++ V + +G++ + A++ + WP ++P + + + Q Sbjct: 608 E--DEAKRERPVMIHRAILGSVERMFAILL---EHYKGKWPFWLSPRQAIVCPVSEKSQ- 661 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ++ ++ + G V D +I + A L + ++VG + + +V ++ Sbjct: 662 --PYALQVRDQIHQAGYYVDVDTTDRKIQKKVREAQLAQYNFILVVGEEEANTRQVSVRV 719 Query: 421 RLTGIREDMSLEEVINYASHR 441 R G MS+E +++Y Sbjct: 720 RDKGDHSVMSMENLLSYFKSE 740 >gi|330443967|ref|YP_004376953.1| threonyl-tRNA synthetase [Chlamydophila pecorum E58] gi|328807077|gb|AEB41250.1| threonyl-tRNA synthetase [Chlamydophila pecorum E58] Length = 635 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 78/445 (17%), Positives = 147/445 (33%), Gaps = 42/445 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++ + + RD + KL L + +++ G+ + P G D + +E Sbjct: 223 LKEHLHQLEEAKKRDHRVLGVKLDLFSQ--QEYAAGMPFFHPRGMIIWDALINFWKELHA 280 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 R G ++ P L + LW SG + +Y + M L + P + +++H+ Sbjct: 281 RAGYQQIKTPQLMNQRLWEISGHWQNYKENMYTLTLDEEN-YAIKPMNCPGCMLYYKTHL 339 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY+ P +I R E+ G+MR R F DA+ LTPE + + Sbjct: 340 HSYKEFPLRVAEIGHVHRHEVSGALSGLMRVRAFHQDDAH-VFLTPEQVEEETLNILDLV 398 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +++H GL + + P G S + + + + Sbjct: 399 AKLYHTFGLAY-HLELSTRPKTG----------------TIGSDELWEHATSALQRALEK 441 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 S I + A Y D+H K R + G I Sbjct: 442 SGSSFIITPEEGAFYGPKIDIHV----------KDAINRTWQCGTI-QLDMFLPERFHLE 490 Query: 302 FKG-ADGKDHYVQMGSYGIG-AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + GK V + G R + +IE + Sbjct: 491 YTNAEGGKSIPVMLHRALFGSIERFLGILIEHFKGKFPLWISPEQVRLITVA-------D 543 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ++ + +G V DD E + + A + V +G + V+++ + I+ Sbjct: 544 RHIPRARELAQKWQNLGLVVTVDDASESVSKKIRNAQTMQVNYMVTLGDQEVANNTLAIR 603 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 R + D+S E+ +N ++ Sbjct: 604 TRDNRVINDVSEEKFLNAILEEKNS 628 >gi|299135303|ref|ZP_07028494.1| threonyl-tRNA synthetase [Afipia sp. 1NLS2] gi|298590280|gb|EFI50484.1| threonyl-tRNA synthetase [Afipia sp. 1NLS2] Length = 681 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 74/434 (17%), Positives = 137/434 (31%), Gaps = 39/434 (8%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E RD ++ L + G+ W G + A +R Sbjct: 257 YLKQLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHAKGWTLFQAIIAYMRRRL-AAD 313 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-----KAMIYGPTHEEVMTDIFRS 120 E++ P + LW SG ++ Y + M D + P + IF+ Sbjct: 314 YDEVNAPQMLDKSLWETSGHWEWYRENMFAAQSAGDEAEDKRWFAIKPMNCPGHVLIFKH 373 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR LP + + R E G+MR R F DA+ F + + + Sbjct: 374 GLKSYRELPIRLAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEDQLADECLKINDL 433 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + + ++ + P + A++ T+V E Sbjct: 434 ILSTYANFGFEGELTVKLSTRPDKRVGTDAAWDHAESVMTKVL---------AQIEAKSG 484 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + I + SI A Y + L D++ + ++ FG Sbjct: 485 NRIKT--SINPGEGAFYGPKFEY---VLRDAIGREWQCGTTQVDFNLPERFG-------- 531 Query: 300 ATFKGAD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + K V + G++ ++ G +W V ++ + Sbjct: 532 AFYIDEHSNKVAPVMVHRAICGSLERFTGILIEHFAGHFPLWLAPVQAVITTITSDGD-- 589 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D +++ G V D E+I + L P ++VG K V I Sbjct: 590 ----DYAREVFEACRAAGLRVEIDLRNEKINYKVREHSLAKVPALLVVGKKEAETRAVSI 645 Query: 419 KHRLTGIREDMSLE 432 + + + L+ Sbjct: 646 RRLGREGQTVLPLD 659 >gi|289642063|ref|ZP_06474216.1| threonyl-tRNA synthetase [Frankia symbiont of Datisca glomerata] gi|289508136|gb|EFD29082.1| threonyl-tRNA synthetase [Frankia symbiont of Datisca glomerata] Length = 610 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 72/442 (16%), Positives = 138/442 (31%), Gaps = 34/442 (7%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD + L L KG+ WLP G D + RE + G Sbjct: 191 YLWQLEEAKKRDHRVIGEALDLFA-FSPAVGKGLPLWLPNGTIVRDELETWAREVERAHG 249 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +DL+ SG Y ++ D + + P + ++++ +SY Sbjct: 250 YQRIVTPHITKSDLYYISGHLPYYADDLYSPIDIDGEEYYLKPMNCPHHHMVYKARPRSY 309 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + +R E + FG+MR R F DA+ + + M + L Sbjct: 310 RELPLRLAEYGTVYRYERSGQLFGMMRVRGFSQNDAHIYCTREQAIDEFLAVMRLHALYY 369 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + A P + H + + Sbjct: 370 DKLGIEDYHMVLALRDPKNTEKYH--------------GDELMWQEAERITRDAMEQSGI 415 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y D + S +++ FG TF Sbjct: 416 PYIEDIGGAAHYGPKVDFVLTSVT---GREFAASTNQVDLYMPEQFG--------LTFTN 464 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 G+ + V + +G+ A + + +P +AP ++ ++ I D Sbjct: 465 RHGEAEQAVVLHRAPLGSHERFVAFLI---EHFAGAFPVWLAPVQVRVVPI---SDRQAD 518 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ RL G DD + ++ A+ P ++G + + + V ++ R Sbjct: 519 GAAAVWRRLVDAGIRAELDDSDNTMQAKIRRAEQQKVPYVAVIGDRELENDSVSVRARGR 578 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + E+I ++ Sbjct: 579 RNLGSRPVPELIEKLGRLIADR 600 >gi|257784517|ref|YP_003179734.1| prolyl-tRNA synthetase [Atopobium parvulum DSM 20469] gi|257473024|gb|ACV51143.1| prolyl-tRNA synthetase [Atopobium parvulum DSM 20469] Length = 565 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 120/369 (32%), Positives = 178/369 (48%), Gaps = 22/369 (5%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S + P L+E+P +A +ASH+L+LR GMI + + G+YS+LPL ++L + AIIR+E + Sbjct: 1 MSSLYAPTLKEDPAEAVLASHRLLLRAGMIRKTAAGLYSYLPLAWRSLLKIEAIIRDEMD 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+ VP + A+LW ESGR+D YG E++R+ DR+D+ GPTHEE TD+ R+ + Sbjct: 61 GIGAQEILVPIMTPAELWEESGRWDVYGDELMRMHDRHDRQFALGPTHEETFTDLIRNEL 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 KSY+ LP T YQIQ KFRDE RPRFG+MR REF+MKD YSF E + Y++ V+Y Sbjct: 121 KSYKQLPVTLYQIQDKFRDERRPRFGLMRGREFIMKDGYSFSANQESLQECYDQEKVAYQ 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMD------------- 229 + R L+++ + A+SG IGGD S EF+ LA+ GE + Sbjct: 181 NVCDRTRLRALQVVADSGQIGGDTSVEFMALAEAGEASLVYCDCGYAADTEAAAAKIKVE 240 Query: 230 --FPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 P DI S++ + E AAT +L + G Sbjct: 241 EREPGQMCEIHTPDIGSIDDVAEFLHVSPAATRKAL------ALVDGNGKPVVCFVPGT- 293 Query: 288 FYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 + + ++ G + I D + Sbjct: 294 HELNEVKAEHAFGEYHMMTDEELDEFGLIKGFIGPVGLPEGIRVVGDLSLEDTQWWLCGA 353 Query: 348 KISLINIKA 356 + ++ Sbjct: 354 NKADYHLDH 362 Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 76/193 (39%), Positives = 111/193 (57%), Gaps = 2/193 (1%) Query: 258 ATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 D+ + D PE RGIEVG +F GTKYS ++ATF +G+D + MG Sbjct: 373 EWKDLVTSQEGDICPECGLPLHAARGIEVGQVFQLGTKYSSALNATFTDENGQDKPLVMG 432 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R++AAV+E +D KGI WP SVAP+++S++ + D DA + Sbjct: 433 CYGIGVSRLLAAVVEQYNDEKGIKWPVSVAPYEVSVLCLSNKDPEIWDAAGAVADACVAA 492 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G + DD E+ G +FA ADL+GFP QVIVG K V++ E+K R TG R +++L+EV Sbjct: 493 GLETVVDDRVERPGVKFADADLIGFPWQVIVGKKGVTNGIAEVKERATGERFEVALDEVA 552 Query: 436 NYASHRFSNNRPV 448 ++ + + R + Sbjct: 553 SWLAEKILPEREL 565 >gi|283457978|ref|YP_003362585.1| threonyl-tRNA synthetase [Rothia mucilaginosa DY-18] gi|283134000|dbj|BAI64765.1| threonyl-tRNA synthetase [Rothia mucilaginosa DY-18] Length = 706 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 70/439 (15%), Positives = 134/439 (30%), Gaps = 32/439 (7%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 I + RD +L L + G+ P G + +R + G Sbjct: 285 RIAEAERRDHRRLGRELDLFS-FPKNIGPGLPVIHPKGGVIKREMEDYVRTRHIQEGFQY 343 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 +S P + DL+ SG Y M + ++ + + +I+RS +SYR L Sbjct: 344 VSTPHISKEDLFYTSGHLPYYADGMFPPMELDNGHYRLKAMNCPMHNEIYRSRGRSYREL 403 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P F++ +RDE G+ R R D++S+ + + L + Sbjct: 404 PLRFFEFGTVYRDEKSGVLQGLTRVRMITQDDSHSYVTKEQAPDE-VRHLLKFMLSLLED 462 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 G+ + + GD +FI + + + Sbjct: 463 FGMTDFYLELSTRDTEGDKKDKFIGTDEQ-----------WEEATAVLEQVAKETGLELV 511 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 A Y + + D++ ++S + FG ++ ADG Sbjct: 512 PDPGGAAFYGPKI---SVQAKDAIGRTWQMSTVQYDFNQPSRFG--------LEYQAADG 560 Query: 308 KDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + S G++ V+ + G W V + + + D Sbjct: 561 TVQEPVMIHSAKFGSIERFLGVLTEHYAGAFPAWLAPVQVIGVPVA------EAFNDYMT 614 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 +I +L G V D ++ + A P +I G + V + R Sbjct: 615 EIADKLRAHGVRVEVDYGSDRFTKKIRTASTEKVPFILIAGGEDAEHGAVSFRFRGNKQE 674 Query: 427 EDMSLEEVINYASHRFSNN 445 + ++E + N Sbjct: 675 NGVPVDEAVARIVEHIRNR 693 >gi|225016667|ref|ZP_03705859.1| hypothetical protein CLOSTMETH_00576 [Clostridium methylpentosum DSM 5476] gi|224950631|gb|EEG31840.1| hypothetical protein CLOSTMETH_00576 [Clostridium methylpentosum DSM 5476] Length = 646 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 72/451 (15%), Positives = 162/451 (35%), Gaps = 38/451 (8%) Query: 2 RRSK---YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 + S+ Y + + RD + KL T + +G+ LP G + + + + Sbjct: 225 KASELEAYLAAVEEAKKRDHNVIGRKLGYFTT-VDVIGQGLPVLLPKGARVIQILQRFVE 283 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTD 116 +E+ + G + P +D + SG + Y + M + +++ + P Sbjct: 284 DEEEKRGYLLTKTPYFAKSDFYKISGHWQHYREGMFVMGDEEKDKEVFALRPMTCPFQFQ 343 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 + + ++SYR+LP + + FR+E G++R R+F + + + P+ + + Sbjct: 344 AYLNEMRSYRDLPLRYNETSTLFRNEASGEMHGLIRVRQFTISEGHLACR-PDQVEEEFK 402 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 + + E+ + D+++ F + + S + + Sbjct: 403 QCLELAKFM------------LETLGLDEDVTYRFSKWDENNRDKYIGSAEEWENVQNLM 450 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 + + + + A Y D+ + ++ + + I+ F +++ Sbjct: 451 RGILNHLELDYTEADGEAAFYGPKLDIQIKNVY---GKEDTLITIQID----FQLASRFD 503 Query: 296 LPMSATFKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + + DG+ Y + +G A++ + G +W I Sbjct: 504 MV----YTDTDGQKKYPYVIHRTSLGCYERTLALLLEKYAGALPLW------IAPEQARI 553 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 + DA L K G V DD E+IG + A L P +++G K V + Sbjct: 554 LPIGERQHDAAYACRDELRKAGLRVEVDDRSEKIGYKIREAQLEKIPYMLVIGDKEVEAN 613 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V ++ R G M + + + +A + Sbjct: 614 AVSVRSRKHGEMGAMPVTQFMEHALNEVRTK 644 >gi|323481345|gb|ADX80784.1| prolyl-tRNA synthetase [Enterococcus faecalis 62] Length = 572 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 107/235 (45%), Positives = 147/235 (62%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+++LR G I Q + GIYS+LPL + L+ + AI+REE Sbjct: 1 MKQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAAGIYSYLPLANRVLEKLKAIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P L A+LW ESGRY++YG + RL DRND+ I GPTHEE T++ R Sbjct: 61 FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEETFTELIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPR G++R REF+MKD YSF SY + Sbjct: 121 EINSYKRLPLNLYQIQTKYRDEKRPRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R GL+ + + G +GG S EF+ +++ GE + C D+ E Sbjct: 181 YSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTI-CYSTESDYAANLE 234 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 65/187 (34%), Positives = 107/187 (57%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ + D P+ V +GIE+GHIF GT+YS M AT +G++ V MG Y Sbjct: 382 EDLRFVQEGDPSPDGNGVLAFTKGIEIGHIFKLGTRYSDAMGATVLDENGREKSVIMGCY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E + D +GI WP +APF + ++ + D+ +++ A +++ G Sbjct: 442 GIGVSRLLSAIVEQNADERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGY 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V DD E+ G +FA ADL+G P+++ VG K V D VE+K + TG ++ EE+ + Sbjct: 502 EVLVDDRNERAGVKFADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEELEST 560 Query: 438 ASHRFSN 444 S + Sbjct: 561 LSILMNT 567 >gi|302335688|ref|YP_003800895.1| prolyl-tRNA synthetase [Olsenella uli DSM 7084] gi|301319528|gb|ADK68015.1| prolyl-tRNA synthetase [Olsenella uli DSM 7084] Length = 571 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 112/226 (49%), Positives = 155/226 (68%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + S+ + P L+E+P DAE+ASH+L+LR GMI + + G+YS+LPL +++ + AIIR+E Sbjct: 6 KMSRLYAPTLKEDPTDAELASHRLLLRAGMIRKGAAGLYSYLPLAWRSIRKIEAIIRDEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA EM VP L ADLW +SGR++ YG E++R+ DR+ + GPTHEE TD+ + Sbjct: 66 ETIGAQEMQVPILTDADLWHQSGRWEVYGPELMRIDDRHGHSYALGPTHEESFTDLVHNE 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +KSY+ LP T YQ+Q KFRDE RPRFG+MR REF+MKDAYSF T E + Y + +Y Sbjct: 126 LKSYKQLPVTLYQVQDKFRDERRPRFGLMRGREFIMKDAYSFSATQESLRQCYEEEKAAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 RI R GL+++P+ A+SG IGGD S EF+ LAD GE ++ Sbjct: 186 ARIAERCGLRALPVVADSGQIGGDSSVEFMALADAGEAELVYCDGC 231 Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats. Identities = 77/222 (34%), Positives = 107/222 (48%), Gaps = 8/222 (3%) Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVG 285 +E L E + DV + D P ARGIE+ Sbjct: 355 WWIVGANEADYHFVRAKLGRDFE-----IGSWVDVIGAREGDVCPSCGAALKGARGIEIS 409 Query: 286 HIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 +F GTKYS M ATF DG++ MG YGIG R +AAV+E HD GI WP SVA Sbjct: 410 QVFQLGTKYSEAMGATFTDEDGREKPFLMGCYGIGVSRTLAAVVEQHHDEHGISWPVSVA 469 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405 P+++ +I + D + E++ L G +V DD E+ G +F ADL+GFP QV+ Sbjct: 470 PYEVEVIPLDVRDDLVWPVAERLATGLVDAGVEVVVDDRKERPGVKFNDADLMGFPFQVV 529 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR-FSNNR 446 G K + D VE+K R TG R ++ + E + + R + R Sbjct: 530 CGKKAIRDGNVELKLRATGERLELPIAEAVRAVAERVLAQRR 571 >gi|307169877|gb|EFN62386.1| Threonyl-tRNA synthetase, cytoplasmic [Camponotus floridanus] Length = 689 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 77/441 (17%), Positives = 141/441 (31%), Gaps = 44/441 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + IR E + G E+ Sbjct: 283 EEAAKRDHRKIGKEQELF--FFHELSPGSCFFQPRGAYIYNTLVEFIRSEYRKRGFQEVI 340 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + ++ LW SG + Y + M D + P + IF +S+R LP Sbjct: 341 SPNIYNSKLWQTSGHWQHYAENMFSF-DVEKETFALKPMNCPGHCMIFDVRCRSWRELPL 399 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + ++ G Sbjct: 400 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCSVEQIKDEMIA-ALEFLRHVYGIFG 458 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 F + T + S D + + ++ Sbjct: 459 FT------------------FNLCLSTRPEKYLGSLKVWDRAEKALEESLNAFGQPWTLN 500 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 Q A Y D+ L D+L + + ++ F ++ + ++ +G+ Sbjct: 501 PQDGAFYGPKIDI---TLMDALKRAHQTATIQLD----FQLPMRF----NLSYVNENGEK 549 Query: 310 HYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + I R++A + ES A + + + Sbjct: 550 TRPVIIHRAILGSVERMIAILTESYGGKWPYWLSPRQAMVVPVV-------SQFDEYAYE 602 Query: 368 IYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + +L G V D D + + + A L F ++VG K + V I+ R + Sbjct: 603 VKQKLWDAGVMVEVDTDSSDTLNKKIRNAQLAQFNFILVVGEKERNAGTVNIRTRDNVVH 662 Query: 427 EDMSLEEVINYASHRFSNNRP 447 +M++EE+I P Sbjct: 663 GEMAVEELIAKLKIMKETRDP 683 >gi|319779147|ref|YP_004130060.1| Prolyl-tRNA synthetase [Taylorella equigenitalis MCE9] gi|317109171|gb|ADU91917.1| Prolyl-tRNA synthetase [Taylorella equigenitalis MCE9] Length = 582 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 122/235 (51%), Positives = 161/235 (68%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SKY + L+E P +AE+ SHK MLR GMI + GIY+++PLG K L V AI+REE Sbjct: 1 MLASKYHINTLKEAPAEAEVVSHKYMLRAGMIRKLGAGIYTYMPLGFKVLKKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GAIE+ +P +Q A+LW+++ R+++YG E+LR DR+ + I PT EEV+TDI + Sbjct: 61 MNRAGAIELLMPIVQPAELWMKTERWNAYGPELLRFKDRHSRDFIIQPTSEEVITDIVAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + S+R LP FY IQ KFRDE RPRFG+MR REFLMKDAYSFD T E + SY KM+ + Sbjct: 121 EVHSWRQLPLNFYHIQTKFRDERRPRFGLMRGREFLMKDAYSFDRTEEEANISYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y+RIF RLGLK + A++G IGG SHEF V+A TGE + + ++ E Sbjct: 181 YVRIFTRLGLKFRAVNADTGSIGGSRSHEFQVIAQTGEDLIVYNPQ-SEYAANIE 234 Score = 156 bits (393), Expect = 1e-35, Method: Composition-based stats. Identities = 67/189 (35%), Positives = 102/189 (53%), Gaps = 3/189 (1%) Query: 255 PYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P D+ N D + RGIEVGH+F+ G KYS + A + +GK+ + Sbjct: 385 PEPQVEDIRNVVEGDPTSDGVGTLAIDRGIEVGHVFFLGDKYSSKLRAVYLDENGKEAVI 444 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 QMG YGIG R+VAA IE +HD GIIWP +AP++I + I + + ++ ++Y + Sbjct: 445 QMGCYGIGVSRIVAAAIEQNHDENGIIWPLPMAPYEIVICPIGWSKSEEVKNKSLELYEQ 504 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G DV DD + G F +L+G P+++ VG + + D +E++ R + +SL Sbjct: 505 LKAEGYDVILDDRDLRTGVMFTEWELIGVPIRITVGDRGLKDGVIEVQKRTEKEAKKLSL 564 Query: 432 EEVINYASH 440 EVINY Sbjct: 565 NEVINYVKS 573 >gi|91977727|ref|YP_570386.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris BisB5] gi|91684183|gb|ABE40485.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Rhodopseudomonas palustris BisB5] Length = 687 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 75/443 (16%), Positives = 139/443 (31%), Gaps = 38/443 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + G+ W G ++ A +R Sbjct: 263 YLKQIEEAEKRDHRRLGRELDLF--HFQEEGPGVVFWHAKGWSVFQSLVAYMRRRL-AGN 319 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK-----AMIYGPTHEEVMTDIFRS 120 E++ P + LW SG +D Y + M + P + IF+ Sbjct: 320 YDEVNAPQILDKVLWETSGHWDWYRENMFAAQSAGENAEDKRWFALKPMNCPGHVQIFKH 379 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + + R E G+MR R F DA+ F + ++ + Sbjct: 380 GLKSYRDLPLRMAEFGIVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEAQLAEECLKINDL 439 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + ++ + P + E A+ + + +N Sbjct: 440 ILSTYSDFGFDGELTVKLSTRPDKRVGTDEMWDHAER-----VMATVLSEIKAQGDNRIK 494 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 +I A Y + L D++ + + ++ FG Sbjct: 495 TEI------NPGEGAFYGPKFEY---VLRDAIGRDWQCGTTQVDFNLPERFG-------- 537 Query: 300 ATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + ADG V + G+M ++ G +W V ++ Sbjct: 538 AFYIDADGAKKAPVMVHRAICGSMERFIGILIEHFAGNFPLWLAPVQLVVATIT------ 591 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + +K+ A + G V D E+I + L P ++VG K V + Sbjct: 592 SEGDEYAKKVVAAARRAGLRVDIDLRNEKINLKVREHSLAKVPALLVVGRKEAETHSVSV 651 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + + M+ + I Sbjct: 652 RRLGSDGQTVMATADAIAALVEE 674 >gi|257055068|ref|YP_003132900.1| prolyl-tRNA synthetase [Saccharomonospora viridis DSM 43017] gi|256584940|gb|ACU96073.1| prolyl-tRNA synthetase, family II [Saccharomonospora viridis DSM 43017] Length = 586 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 122/386 (31%), Positives = 172/386 (44%), Gaps = 27/386 (6%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G + + + G YSWLPLG + L NV AI+REE Sbjct: 4 RMSSLFLRTLREDPADAEVPSHKLLVRAGYVRRVAPGGYSWLPLGLRVLRNVEAIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ P L + + +GR+ YG + RL DR + GPTHEE+ + Sbjct: 64 DAIGAQEIQFPALLPKEPYETTGRWTEYGPSLFRLVDRKGADYLLGPTHEELFALTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ K+RDE RPR G++R REF+MKD+YSFDL EG SY +Y Sbjct: 124 YSSYKDYPVILYQIQTKYRDEARPRAGILRGREFIMKDSYSFDLDDEGLARSYELHRNAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 LRIF RLGL + + A SG +GG S EF+ +A+TGE + ++ E Sbjct: 184 LRIFDRLGLDYVVVAATSGAMGGSASEEFLAVAETGE-DTYVRSTESEYAANVEAVVTP- 241 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 VE P A N ++L + ++G F Sbjct: 242 -APPEQSVED--KPAAQVHYTPNTPTIETLVD----FLNAADLGRTFTAAD--------- 285 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 V + + G I D + + + + ++ D Sbjct: 286 ------TLKNVLVKTRMPGEEDWKLLGIGVPGDREVDMKRLEASLAPAEVALLEDSDFAA 339 Query: 362 RDACEKIY---ARLSKVGCDVFWDDM 384 K Y L G D Sbjct: 340 NPFLVKGYIGPGALQANGVRYLVDPR 365 Score = 150 bits (378), Expect = 6e-34, Method: Composition-based stats. Identities = 68/188 (36%), Positives = 102/188 (54%), Gaps = 4/188 (2%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ + V+ARGIE+GHIF G KY+ G D K + MG Sbjct: 396 GTVEAAEVREGDPSPDGRGTLVTARGIEIGHIFQLGRKYTDAFEVDALGPDSKPIRITMG 455 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG RVVAA+ E HD G++WP SVAP + + I D + E++ A+L++ Sbjct: 456 SYGIGVSRVVAAIAEQHHDELGLVWPRSVAPADVH-VVIAGKDDAVTEGGERLAAQLAER 514 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G V DD G +FA A+L+G P V+VG + ++ VE+K R TG R +++++ + Sbjct: 515 GVRVLLDDRKATPGVKFADAELIGVPTIVVVG-RGLAKGVVEVKDRATGERTEVAVDSAV 573 Query: 436 NYASHRFS 443 + S Sbjct: 574 GHLVDLVS 581 >gi|218530550|ref|YP_002421366.1| threonyl-tRNA synthetase [Methylobacterium chloromethanicum CM4] gi|218522853|gb|ACK83438.1| threonyl-tRNA synthetase [Methylobacterium chloromethanicum CM4] Length = 675 Score = 223 bits (569), Expect = 4e-56, Method: Composition-based stats. Identities = 74/443 (16%), Positives = 141/443 (31%), Gaps = 40/443 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E R D ++ L + G+ W G + A +R + Sbjct: 232 YLHRLEEAERRDHRRLGKEMDLF--HFQEEGPGVVFWHAKGWTIFQELIAYMRRRL-KGD 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-----KAMIYGPTHEEVMTDIFRS 120 E++ P + LW SG + Y + M + + P + IF+ Sbjct: 289 YAEVNAPQILDKSLWETSGHWGWYRENMFAAQSAGEEAEDKRWFALKPMNCPGHVQIFKH 348 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + + R E G+MR R F DA+ F + + Sbjct: 349 GLKSYRDLPLRMAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEDQLAAECLKIN-D 407 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L + G I ++ P S A+ TQV E Sbjct: 408 LILSTYADFGFDQILVKLSMRPEKRVGSDALWDHAEAVMTQVL---------AQIEEQSG 458 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 I + ++ A Y + L D++ + + ++ F ++ Sbjct: 459 GRIKT--AVNPGEGAFYGPKFEY---VLRDAIGRDWQCGTTQVD----FNLPERFD---- 505 Query: 300 ATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A++ K V + G+M ++ G +W V ++ Sbjct: 506 ASYIDADSQKKPPVMIHRAICGSMERFTGILIEHFAGHFPLWLAPVQVVVATIT------ 559 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 ++ L + G V D E+I + L P+ + +G + + V + Sbjct: 560 SDADPYAREVVRVLERAGLRVEADLRNEKINYKVREHSLAKVPVLLALGRREAEERTVSV 619 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + M+L+ + Sbjct: 620 RRMGSQKTTTMALDAALAAFIEE 642 >gi|329724323|gb|EGG60835.1| proline--tRNA ligase [Staphylococcus epidermidis VCU144] Length = 567 Score = 223 bits (569), Expect = 4e-56, Method: Composition-based stats. Identities = 128/366 (34%), Positives = 191/366 (52%), Gaps = 6/366 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P ++E P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N++ IIREE Sbjct: 1 MKQSKVFIPTMREVPAEAEALSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNISKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T + R Sbjct: 61 MESIDAVEILMPALQQAELWEESGRWSAYGPELMRLKDRNGREFALGPTHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ K+RDE RPRFG++R REFLMKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPLTLFQIQSKYRDEKRPRFGLLRGREFLMKDAYSFHSDEASLDATYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+G+ + P+ A+SG IGG +HEF+ L++ GE + + D+ E + Sbjct: 181 YSRIFKRVGINARPVVADSGAIGGSHTHEFMALSEIGEDTIVY-SNESDYAANIEKAEVV 239 Query: 241 DIISLNSIV----EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 S + P T+ E L L E + I+ I + + Sbjct: 240 YHPSHKHSALAELTKVETPNVKTAQEVAEYLERPLDEIVKTMIFKIDGEFIMFLVRGHHE 299 Query: 297 PMSATFKGADGKDHYVQMGS-YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 K G +H + + + D I+ D+ + + Sbjct: 300 LNEVKLKSYFGTEHVEMATPDEIVNLVDANPGSLGPIFDKDIKIYADNYLQDLNNFVVGA 359 Query: 356 AHDQVC 361 D Sbjct: 360 NEDHYH 365 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 67/166 (40%), Positives = 99/166 (59%), Gaps = 2/166 (1%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E ++D GIIW Sbjct: 404 GIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGVSRTLSAIVEQNNDENGIIW 463 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P SV PF I LI I R +++Y +L DV +DD E+ G +F +DL+G Sbjct: 464 PKSVTPFDIHLITINPKKDDQRTLGDQLYQKLMDS-YDVLYDDRKERAGVKFNDSDLIGL 522 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 P++V+VG + + VE+K R+ G+ E++ ++E+ Y F N + Sbjct: 523 PVRVVVGKR-AEEGIVEVKQRINGLSEEVQIDELEYYLQDLFKNIK 567 >gi|325068893|ref|ZP_08127566.1| threonine--tRNA ligase [Actinomyces oris K20] Length = 683 Score = 223 bits (569), Expect = 4e-56, Method: Composition-based stats. Identities = 69/456 (15%), Positives = 139/456 (30%), Gaps = 45/456 (9%) Query: 5 KYFLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L + RD +L L + + G+ + P G + + + Sbjct: 246 KAYQTRLAEAAKRDHRKLGAELDLYS-FPEEIGPGLVVFHPKGAMLRHQIEQYVVDRHQD 304 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHE 111 G + P + L+ SG Y M + + + Sbjct: 305 YGFDFVHTPEISKGGLFHTSGHLPYYADTMFPPMLADEERDAEGNITKAGQEYYLKAMNC 364 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IFRS +SYR LP F+++ +R E G+ R R F D++++ + Sbjct: 365 PMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFTQDDSHTYCTPEQAG 424 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + +L I GL + + G +FI S Sbjct: 425 EE-IRAQIDFFLSILKAFGLTDFYLELSTRDEDGAKKDKFI-----------GSDADWAA 472 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + D A Y + ++ D++ ++S + Sbjct: 473 ATQALQDACDASGLEVVPDPGGAAFYGPKV---SVQVKDAIGRTWQMSTIQYDFNQP--- 526 Query: 291 GTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 + ADG + S +G++ V+ + +P ++P ++ Sbjct: 527 -----ERFDLEYTAADGTHQRPIMIHSAKLGSVERFIGVLT---EHYAGAFPAWLSPVQV 578 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 LI + + + + A+L G V D ++ G + A P +I G + Sbjct: 579 RLIPVA---EAFDAYVDDVAAQLRAQGVRVEVDHSDDRFGKKIRNASKDKIPFTLIAGGE 635 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + R + ++E + + Sbjct: 636 DAEAGAVSFRFRDGQQTNGVPVKEAVAHIVSVIDAR 671 >gi|195387892|ref|XP_002052626.1| GJ17652 [Drosophila virilis] gi|194149083|gb|EDW64781.1| GJ17652 [Drosophila virilis] Length = 745 Score = 223 bits (569), Expect = 4e-56, Method: Composition-based stats. Identities = 75/432 (17%), Positives = 149/432 (34%), Gaps = 40/432 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + +IR E + G E+ Sbjct: 340 EEAAKRDHRKIGREQELF--FFHELSPGSCFFQPRGAHIYNTLMNLIRGEYRKRGFQEVI 397 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + +A LW+ SG + Y M +K P + IF + +S+R LP Sbjct: 398 SPNIYNAKLWMTSGHWQHYADNMFSFEAEKEK-FALKPMNCPGHCLIFDNRNRSWRELPL 456 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + ++ G Sbjct: 457 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEM-KGCLDFLRHVYTIFG 515 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 F ++ T + + D + ++ Sbjct: 516 FS------------------FQLVLSTRPDKYLGELEQWDAAEKALAESLNEFGMPWKEN 557 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + + ++ F +++L A K Sbjct: 558 PGDGAFYGPKIDI---TIMDALKRPFQCATIQLD----FQLPIRFNLNYIA---DDGEKK 607 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + +G++ + A++ + WP ++P ++ ++ + + + + Sbjct: 608 RPVIIHRAILGSVERMIAILT---ENYAGKWPFWLSPRQVMVVPVGP---AYDEYAKSVR 661 Query: 370 ARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L G D D G+ + + A L F ++VG K S + V ++ R + + Sbjct: 662 DQLYAAGFMSEADCDAGDTMNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGE 721 Query: 429 MSLEEVINYASH 440 +S+ E+I Sbjct: 722 VSVAELITKLQK 733 >gi|195114918|ref|XP_002002014.1| GI17149 [Drosophila mojavensis] gi|193912589|gb|EDW11456.1| GI17149 [Drosophila mojavensis] Length = 691 Score = 223 bits (569), Expect = 4e-56, Method: Composition-based stats. Identities = 76/432 (17%), Positives = 148/432 (34%), Gaps = 40/432 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + +IR E + G E+ Sbjct: 286 EEAAKRDHRKIGREQELF--FFHELSPGSCFFQPRGAHIYNTLMNLIRGEYRKRGFQEVI 343 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + +A LW+ SG + Y M +K P + IF + +S+R LP Sbjct: 344 SPNIYNAKLWMTSGHWQHYADNMFSFEAEKEK-FALKPMNCPGHCLIFDNRNRSWRELPL 402 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + ++ G Sbjct: 403 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEM-KGCLDFLRHVYTIFG 461 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 F ++ T + D D + ++ Sbjct: 462 FS------------------FQLVLSTRPDKYLGELDQWDAAEKALAESLNEFGMPWKEN 503 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + + ++ F +++L A K Sbjct: 504 PGDGAFYGPKIDI---TIMDALKRPFQCATIQLD----FQLPIRFNLNYIA---DDGEKR 553 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + +G++ + A++ + WP ++P ++ ++ + + + + Sbjct: 554 RPVIIHRAILGSVERMIAILT---ENYAGKWPFWLSPRQVMVVPVGP---AYDEYAKTVR 607 Query: 370 ARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 L G D D G+ + + A L F ++VG K S V ++ R + + Sbjct: 608 DELYAAGFMSEVDCDAGDTMNKKIRNAQLAQFNFILVVGDKERSSKTVNVRTRDNKVHGE 667 Query: 429 MSLEEVINYASH 440 +S+ E+I+ Sbjct: 668 VSVAELISKLQK 679 >gi|111115550|ref|YP_710168.1| threonyl-tRNA synthetase [Borrelia afzelii PKo] gi|216263396|ref|ZP_03435391.1| threonyl-tRNA synthetase [Borrelia afzelii ACA-1] gi|122956324|sp|Q0SMD6|SYT_BORAP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|110890824|gb|ABH01992.1| threonyl-tRNA synthetase [Borrelia afzelii PKo] gi|215980240|gb|EEC21061.1| threonyl-tRNA synthetase [Borrelia afzelii ACA-1] Length = 581 Score = 223 bits (569), Expect = 4e-56, Method: Composition-based stats. Identities = 69/443 (15%), Positives = 150/443 (33%), Gaps = 37/443 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L + +E RD +L L + + G+ + P G K + REE ++ Sbjct: 172 RSYLNLREEIKKRDHRKLGKELDLFSIH-EEIGPGLVFFHPNGAKIRALIEDFWREEHSK 230 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + LW SG D Y M + + P + I+ + Sbjct: 231 NGYDILFTPHIGKSWLWQTSGHLDFYKDSMFEKMEMDKSDYYLKPMNCPFHIAIYNTGKH 290 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LPF + ++ +R E G+MR+R F DA+ + ++ + Sbjct: 291 SYRDLPFRWAELGTVYRYEKIGALHGIMRARGFTQDDAHIICTHSQVLDE-IKEVLRFAI 349 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ + G S+ + P + + + + Sbjct: 350 YMWSKFGFNSLKAYLSTKP-----------------DKFVGNDSDWEMSLKVLEEALSGF 392 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I + A Y D+ K+ DSL ++S + F ++++ +A Sbjct: 393 EVPYEIDKGGGAFYGPKIDL---KIVDSLEREWQMSTIQFD----FNLPERFNMTYTAE- 444 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ ++ + G +W I + Sbjct: 445 --DGKEKRPFMIHRALLGSIERFFGILIEHYGGAFPLW------LSPIQAVIIPVNNAVE 496 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D K++ + G + D+ ++ ++ P I+G + + K+ I+ R Sbjct: 497 DYAIKVFNKFKNEGMRIKLDNTSSRMNAKIREYQAKKIPYMFIIGEREAKEEKISIRTRT 556 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L+E + + + Sbjct: 557 NEQINGLELDEALKLILLKIRDK 579 >gi|182419388|ref|ZP_02950640.1| threonyl-tRNA synthetase [Clostridium butyricum 5521] gi|237666667|ref|ZP_04526652.1| threonine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376719|gb|EDT74291.1| threonyl-tRNA synthetase [Clostridium butyricum 5521] gi|237657866|gb|EEP55421.1| threonine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 643 Score = 223 bits (569), Expect = 4e-56, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 154/445 (34%), Gaps = 35/445 (7%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 ++ + + RD +L L T + +G+ +P G K + + + +E+ + Sbjct: 228 EFLEALEEAKKRDHNKLGRELKLFTT-DEKVGQGLPLLMPKGAKIVQTLQRWVEDEEEKR 286 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P + +DL+ SG +D Y M +++D+ P I+ + Sbjct: 287 GYVLTKTPLMAKSDLYKVSGHWDHYKDGMFVLGDEEKDDEVFALRPMTCPFQYTIYNAEQ 346 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+LP + + FR+E G++R R+F +TPE + + + Sbjct: 347 HSYRDLPIRYAETSTLFRNEASGEMHGLIRVRQFT-LADGHLIVTPEQLEEEFKGVVELI 405 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + LG I +++ F + D + + D Sbjct: 406 QYLMETLG------------IAEKITYRFSKWDPNNTEKYINDPDAWNHTQDTMRNILDH 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + A Y D+ + + + I+ + T Sbjct: 454 LKINYVEADDEAAFYGPKLDLQFRNVH---GKEDTLFTVQIDFAL--------AERFDMT 502 Query: 302 FKGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +G+ + IG A++ + +P ++P + ++ + Sbjct: 503 YIDKNGEKKRPYIIHRSSIGCYERTLAMLI---EEYAGAFPTWLSPVQAKILPLSDK--- 556 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D EK+ L G V D E+IG + A L P ++VG K +++V ++ Sbjct: 557 YNDYAEKVTKALKDKGIRVETDYRAEKIGYKIREARLERTPYILVVGEKEAENNQVSVRS 616 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R M L ++ +N Sbjct: 617 RKNDDEGAMDLNAFVDRIVSEVANK 641 >gi|145295898|ref|YP_001138719.1| prolyl-tRNA synthetase [Corynebacterium glutamicum R] gi|166980117|sp|A4QF01|SYP_CORGB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|140845818|dbj|BAF54817.1| hypothetical protein [Corynebacterium glutamicum R] Length = 588 Score = 223 bits (569), Expect = 4e-56, Method: Composition-based stats. Identities = 109/282 (38%), Positives = 155/282 (54%), Gaps = 5/282 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G I + + GIYSWLPLG +A+ N+ A++REE Sbjct: 4 RLSTLFLRTLREDPADAEVPSHKLLVRAGYIRRVAPGIYSWLPLGLRAVRNIEAVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ P L + + + R+ YG + RL DR + GPTHEE+ + Sbjct: 64 DAIGGQELLFPALLPREPYETTQRWTEYGDSLFRLKDRKGADYLLGPTHEEMFAATVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR GV+R REF+MKD+YSFD++ G SY K +Y Sbjct: 124 YNSYKDFPVTLYQIQTKYRDEERPRAGVLRGREFVMKDSYSFDMSDAGLDESYAKHRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF RLGL+ +A SG +GG S EF+ +++ GE F ++ E Sbjct: 184 QRIFDRLGLEYAICQATSGAMGGSASEEFLAVSENGE-DTFVRSTSGNYAANVEAVVTQ- 241 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 + +E P A T + + D+L + IE Sbjct: 242 -PGVERDIEGL--PEAVTYETPVSETIDALVDWANSIDVQIE 280 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 93/192 (48%), Gaps = 6/192 (3%) Query: 258 ATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 + K D P E ARGIE+GHIF G KY+ +GK MG Sbjct: 399 GFIEAAEIKEGDPAPAGEGTLTLARGIEIGHIFQLGRKYTEAFDVQILDENGKRAIPTMG 458 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R++A + E HD G+ W VAP+++ ++ D +A E+ A LS Sbjct: 459 SYGLGVTRLLAVLAEQRHDDAGLNWSVEVAPYQVHVVAAN-KDAAAIEAAERFAAELSAA 517 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV +DD G +F A+LLG P +I+G + ++ KVE++ R G + ++ ++ Sbjct: 518 GLDVLFDDRPKVSPGVKFKDAELLGMPFALILG-RGYAEGKVELRVRG-GEKSELDADQA 575 Query: 435 INYASHRFSNNR 446 + + R Sbjct: 576 VAQIVEMVAQAR 587 >gi|206603264|gb|EDZ39744.1| Threonyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG'] Length = 617 Score = 223 bits (569), Expect = 4e-56, Method: Composition-based stats. Identities = 79/438 (18%), Positives = 147/438 (33%), Gaps = 42/438 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +E R D +L L + + G+ WLP G + + + + +R G Sbjct: 203 YLRQQEEVQRRDHRKLGRELGLFRTLDEK-GAGLVLWLPKGSQIRRTLEELWKILHDRHG 261 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + DLW++SG +D Y M R + A P + IFR ++SY Sbjct: 262 YRYVYTPHIARLDLWMQSGHWDYYQDSMFRPMETEGTAYELKPMNCPFHILIFRESVQSY 321 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ +R E G+MR R F DA+ F + + + ++ Sbjct: 322 RDLPIRLSELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCKPEDLAGE-IRNVLALVDQM 380 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 R G + + P S E + S ++ Sbjct: 381 IGRFGFTDRTVYLSTRPEKSVGSDE-----------------NWEMATGSLRKALEESGI 423 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + Y D+ K D++ ++S ++ F K+ T++ Sbjct: 424 PYEVDPGEGVFYGPKIDI---KFHDAIGRAWQLSTIQVD----FNLPEKFD----LTYRN 472 Query: 305 ADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G+ M + R +IE + Sbjct: 473 DSGEPCRPIMIHRALFGSIERFFGILIEHYAGAFPLWLAPEQVRIMTIA-------DRHI 525 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + + +RL G D E+IG + A + P +VG + V +++V ++ R Sbjct: 526 PYAQTVLSRLKDRGVRAEGDFRNEKIGFKVREAQMEKIPEMWVVGDREVEETRVSVRSRE 585 Query: 423 TGIREDMSLE-EVINYAS 439 ++ LE E+ + Sbjct: 586 GEKKDLCPLESELEDLFR 603 >gi|268532388|ref|XP_002631322.1| C. briggsae CBR-TRS-1 protein [Caenorhabditis briggsae] Length = 704 Score = 223 bits (569), Expect = 4e-56, Method: Composition-based stats. Identities = 71/433 (16%), Positives = 147/433 (33%), Gaps = 43/433 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L HQ S G W P G + + IR++ R G E+ Sbjct: 295 EEAAKRDHRKLGKEQDLF--FFHQLSPGSAFWYPKGAHIYNKLVDFIRKQYRRRGFTEVI 352 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + + LW SG + Y ++M + + + P + +F +Y LPF Sbjct: 353 TPNMYNKKLWETSGHWQHYSEDMFK-IEVEKEEFGLKPMNCPGHCLMFGHMPHTYNELPF 411 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F + R+E+ G+ R R F DA+ F + S+ + + ++ Sbjct: 412 RFADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCRQDQISEE-IKQCLDFLEYAYEKVF 470 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + + P G E D + ++ Sbjct: 471 GFTFKLNLSTRPEGFLGKIE-----------------TWDQAEADLTEALNATGRKWALN 513 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L N + + ++ F ++ ++ G+ Sbjct: 514 PGDGAFYGPKIDI---TIQDALKRNFQCATIQLD----FQLPNQFD----LSYFDEKGEK 562 Query: 310 HYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 M + R+ A + ES + RD + Sbjct: 563 QRPVMIHRAVLGSVERMTAILTESYGGKWPFWLSPRQCKIITV-------HESVRDYAKD 615 Query: 368 IYARLSKVGCDVFWDD-MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + ++ G +V +D+ G+ + Q + L F +++G+K + V ++ R +R Sbjct: 616 VKKQIFDAGFEVEYDEFCGDTMNKQVRNSQLAQFNFILVLGAKEKENGTVNVRTRDNAVR 675 Query: 427 EDMSLEEVINYAS 439 ++ +E++++ Sbjct: 676 GEVPIEKLLSKFR 688 >gi|331701570|ref|YP_004398529.1| threonyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929] gi|329128913|gb|AEB73466.1| threonyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929] Length = 648 Score = 223 bits (569), Expect = 4e-56, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 162/441 (36%), Gaps = 36/441 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + + RD + ++L L + + G+ W+P G + I +++ G Sbjct: 235 KRKEAHERDHRVIGNELDLF--FVDPKVGAGLPYWMPNGATIRRTIERYIVDKEVANGYQ 292 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYR 126 + P L + DL+ +SG +D Y ++M D D + + P + I+ HI+SYR Sbjct: 293 HVYTPVLANLDLYKQSGHWDHYREDMFPPMDMGDGEELELRPMNCPSHIQIYNHHIRSYR 352 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP ++ + R E G+ R RE + D ++F + + + + + ++ Sbjct: 353 ELPLRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQIQEE-FKNILNLMVEVY 411 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF-PIPSENTDFDDIIS 244 H + R D T+ + D M D++ Sbjct: 412 HDFDINDYTFRLS--------------YRDPKNTEKYFDDDEMWTRAQTMLKGAMDEMGL 457 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV + +L + +S ++ F ++ L + G Sbjct: 458 DYVEAEGEAAFYGPKLDVQTKT---ALGNEETLSTIQLD----FMLPERFDLH----YIG 506 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DGK H M G + + + + +P +AP ++ +I + D Sbjct: 507 EDGKQHRPVMIHR--GLVSTMERFVAYLTEIYKGAFPTWLAPHQVKIIPV--SQDKHLDY 562 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +KI +L + D E++G A P ++VG + VS + V ++ Sbjct: 563 AKKINDQLRALKIRSSVDTRAEKMGYLIRDAQTHKIPYTLVVGDEEVSGNSVSVRKYGEQ 622 Query: 425 IREDMSLEEVINYASHRFSNN 445 + S+ + I+ S ++ Sbjct: 623 DTQSESVPDFIDEVSKDIASY 643 >gi|256824985|ref|YP_003148945.1| prolyl-tRNA synthetase [Kytococcus sedentarius DSM 20547] gi|256688378|gb|ACV06180.1| prolyl-tRNA synthetase, family II [Kytococcus sedentarius DSM 20547] Length = 596 Score = 223 bits (569), Expect = 4e-56, Method: Composition-based stats. Identities = 103/269 (38%), Positives = 151/269 (56%), Gaps = 3/269 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S FL L+E+P DAE+ H+L++R G + + + GIY+WLPLG K ++ V I+REE Sbjct: 3 MRMSTLFLRTLREDPTDAELPGHRLLVRAGYVRRVAPGIYTWLPLGLKVMEKVKGIVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E++ P+L + + S R+ YG ++ RL DR M+ GPTHEE+ T + Sbjct: 63 MEAIGDQEIAFPSLLPREPYEASNRWTEYGDDLFRLTDRKGADMLLGPTHEEMFTLAVKD 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP +QI K+RDELRPR GV+R REF MKDAYSFD+ G + +Y + + Sbjct: 123 LYTSYKDLPLGLFQILPKYRDELRPRAGVLRGREFTMKDAYSFDVDEAGLEAAYQRHRKA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y R+F RLG + + + A+SG +GG S EF+ + D+GE + + E Sbjct: 183 YTRVFDRLGFEYVAVHADSGAMGGSASEEFLAVMDSGEDTFVRDESG--YAANVEAVQMP 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFD 269 + E+ TA + H E D Sbjct: 241 VVPVPTDEAER-TALWGHLPAAHVEDTPD 268 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 3/178 (1%) Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 +TA + E ARG+E+GHIF GTKY+ + +G Sbjct: 400 HGRDFTADGTIHAASIREGDPSPTGAGPLRLARGVEMGHIFQLGTKYAEALGLKVLDQNG 459 Query: 308 KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 K VQMGSYGIG R V V E+ HD G++WP ++P + ++ D + E+ Sbjct: 460 KLVTVQMGSYGIGITRAVGVVAETHHDEIGLVWPRELSPADVHVVATG-KDAAVLEKAEE 518 Query: 368 IYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + A L + G V DD G +F A+L+G P ++VG K +++ +VEIK R G Sbjct: 519 LTAALEQQGLTVLLDDRPKVSPGVKFKDAELIGVPTILVVG-KGLAEGEVEIKDRAAG 575 >gi|220912797|ref|YP_002488106.1| threonyl-tRNA synthetase [Arthrobacter chlorophenolicus A6] gi|254783507|sp|B8H9E8|SYT_ARTCA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|219859675|gb|ACL40017.1| threonyl-tRNA synthetase [Arthrobacter chlorophenolicus A6] Length = 669 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 63/450 (14%), Positives = 124/450 (27%), Gaps = 47/450 (10%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 I + RD +L L + + G+ + P G + R+ G Sbjct: 252 RIAEAERRDHRKLGSELDLFS-FPDELGSGLPVFHPKGGIIRKEMEDYSRQRHVEAGYEF 310 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTD 116 + P + L+ SG D Y + M + + P + + Sbjct: 311 VYTPHITKGHLYEVSGHLDWYKEGMFPAMHVDAELNEDGTVRKPGQDYYLKPMNCPMHNL 370 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IFRS +SYR LP ++ +R E G+ R R DA+ + + + Sbjct: 371 IFRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTREQMKEELTK 430 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 L + GL + + + + + Sbjct: 431 -TLTFVLDLLKDYGLNDFYLELST----------------KDPEKYVGEDAAWEEATRTL 473 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 + A Y + + D+L ++S ++ F ++ Sbjct: 474 AEVAQESGLELVPDPGGAAFYGPKI---SVQAKDALGRTWQMSTIQLD----FNLPERFE 526 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 L A + V + G++ V+ + G W V I + Sbjct: 527 LEFQAA---DGSRQRPVMIHRALFGSVERFMGVLTEHYAGAFPAWLAPVQVVGIPVA--- 580 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + + + +L G D ++ + A P +I G Sbjct: 581 ---ETFNEYMFDVVDQLKAAGIRAEVDTSSDRFPKKIRTASKDKIPFVLIAGGDDAEAGA 637 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + R + + E + + N Sbjct: 638 VSFRFRDGSQDNGVPVAEAVKRITEAVRNR 667 >gi|315604524|ref|ZP_07879587.1| proline--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313536|gb|EFU61590.1| proline--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310] Length = 602 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 101/239 (42%), Positives = 141/239 (58%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S +FL L+E+P DAE+ SHKL++R G I + + GIY+WLPLG + L + I+REE + Sbjct: 5 LSTFFLRTLREDPADAEVNSHKLLVRAGYIRRTAPGIYTWLPLGLRTLRKIEDIVREEMD 64 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+ P L A+ + + R++ YG + +L DR + PTHEE+ T + + Sbjct: 65 AMGAQEVHFPGLIPAEPYKATNRWEEYGPTLFKLEDRKGGDYLLAPTHEEMFTLLVKDMF 124 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSFD+T G SY +Y Sbjct: 125 SSYKDLPTTLYQIQTKYRDEARPRAGLIRGREFVMKDAYSFDVTEVGLDASYQAERDTYE 184 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF RLGL+ + + A SG +GG S EF+ + GE S + T D Sbjct: 185 RIFTRLGLRYVIVSAMSGAMGGSRSEEFLHPSPIGEDTFVASPGGYAANAEAVTTVAPD 243 Score = 143 bits (360), Expect = 7e-32, Method: Composition-based stats. Identities = 60/187 (32%), Positives = 89/187 (47%), Gaps = 5/187 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ RGIE+GHIF G KY+ + T GK V MG Sbjct: 410 GTIEAAEVREGDPAPDGSGPLHLERGIEIGHIFQLGRKYAQALGLTVLDECGKTQVVTMG 469 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG RV+AA+ E++ D +G+ WP +APF + ++ + + L Sbjct: 470 SYGIGVTRVMAALAEANCDERGLSWPAQIAPFDVHVLATGKG-EEVFATAASLGDELDVA 528 Query: 376 GCDVFWDD-MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV DD G +F +L+G P ++VG + ++D KVEI+ R TG + +EE Sbjct: 529 GLDVLVDDRRKVSAGVKFKDFELVGIPFGLVVG-RSLADGKVEIRVRATGETIVVPVEEA 587 Query: 435 INYASHR 441 Sbjct: 588 AARLREL 594 >gi|86741833|ref|YP_482233.1| threonyl-tRNA synthetase [Frankia sp. CcI3] gi|86568695|gb|ABD12504.1| Ser-tRNA(Thr) hydrolase [Frankia sp. CcI3] Length = 701 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 70/448 (15%), Positives = 141/448 (31%), Gaps = 39/448 (8%) Query: 5 KYFLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L + RD +L L + + G+ + P G + R Sbjct: 289 KAYQTRLAEAEKRDHRKLGAELDLFS-FPTEIGPGLAVFHPRGGAIRTAMEDYSRRRHIE 347 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHI 122 G ++ P + ++L+ SG D + + M P + + IFRS Sbjct: 348 AGYSFVNTPHITKSELYQISGHLDWFAEGMYPPMQLDGGTDYYLKPMNCPMHILIFRSRG 407 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR LP ++ +R E G+ R R DA+ F + + + Sbjct: 408 RSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDAHLFCAREQLPTEL-DSVLTFV 466 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L + GL + + P G + + + Sbjct: 467 LGLLRDFGLTDFYLELSTRPAG----------------KAVGTDEEWAQATELLREAAQK 510 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y + + D++ ++S ++ F ++ Sbjct: 511 QDLELVMDPGGGAFYGPKI---SVQARDAIGRTWQLSTIQVD----FQLPRRF----GLE 559 Query: 302 FKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 ++ ADG + + G + A++ + P +AP ++ I I Sbjct: 560 YQAADGTRQRPFMIHRALFGTIERFFAILL---EHYAGALPPWLAPVQVVGIPIT---DE 613 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 +++ RL+ G V D +++ + A P ++ G V+ V + Sbjct: 614 HVPYLDEVARRLAAHGLRVEVDSSDDRMQKKIRTAQKQKVPFMLLAGDSDVAQGAVSFRF 673 Query: 421 RLTGIREDMSLEEVINYASHRFSNNRPV 448 R R + ++E + R V Sbjct: 674 RDGTQRNGVPVDEAVAEILDAVERRRQV 701 >gi|302550176|ref|ZP_07302518.1| threonyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736] gi|302467794|gb|EFL30887.1| threonyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736] Length = 658 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 72/440 (16%), Positives = 134/440 (30%), Gaps = 38/440 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + Q G+ + P G + R G + Sbjct: 254 EAEKRDHRKLGSELDLFSV-PEQIGSGLAVFHPKGGIIRRVMEDYSRRRHEEEGYEFVYT 312 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P L+ SG D Y M P + + IF + +SYR LP Sbjct: 313 PHATKGKLFETSGHLDWYADGMYPPMQLDEGVDYYLKPMNCPMHNLIFDARGRSYRELPL 372 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 ++ +R E G+ R+R F DA+ + + ++ +K L + G Sbjct: 373 RLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQMAEEL-DKTLTFVLGLLRDYG 431 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 L + + + S + + + + Sbjct: 432 LTDFYLELST----------------KDPEKFVGSDEAWEEATETLRQVAEKQGLPLVPD 475 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y + + D++ ++S ++ F ++ + GADG Sbjct: 476 PGGAAFYGPKI---SVQTKDAIGRTWQMSTIQLD----FNLPERFD----LEYTGADGAK 524 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + G++ AV+ + +P +AP + I I + EK Sbjct: 525 QRPVMIHRALFGSIERFFAVLL---EHYAGAFPAWLAPVQAVGIPIG---DAHVEYLEKF 578 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 A + G V D +++ + A P VI G + +S V ++R Sbjct: 579 AAAAKRKGLRVEVDSSSDRMQKKIRNAQKQKVPFMVIAGDEDMSHGSVSFRYRDGSQENG 638 Query: 429 MSLEEVINYASHRFSNNRPV 448 + +E I V Sbjct: 639 IPFDEAIAKIQKVVEERAQV 658 >gi|123968188|ref|YP_001009046.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. AS9601] gi|166225480|sp|A2BQ78|SYT_PROMS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123198298|gb|ABM69939.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. AS9601] Length = 638 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 136/442 (30%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD K L I + S G+ W P G + IRE + Sbjct: 231 YLTRIEEAEKRDHRKLGKKHSLF--HIQEESPGMIFWHPNGWTIYQVLEKYIREILKKND 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P LW +SG ++ + +M ++ P + IF +KSY Sbjct: 289 YLEIKTPQAVDKSLWEKSGHWEKFRDDMFT-TASENRTYAIKPMNCPCHIQIFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 ++LP + R+E G+MR R F DA+ F T E + + + Sbjct: 348 KDLPIRLAEFGSCHRNEPSGALHGLMRVRNFTQDDAHIFC-TEEQIQEEVSTFIDLVFEV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ + P S+D D + D+ Sbjct: 407 YKTFGFDEIIIKLSTRPEKR-----------------VGSEDIWDKSEEALTKALDNKNL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ AT+ Sbjct: 450 KWELQPGEGAFYGPKIEF---SLKDCLNRVWQCGTIQVDFSMPIRLD--------ATYVD 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + + +G+ ++ ++ K IW +S+ + Sbjct: 499 IDNEKRNPVMLHRAILGSFERFIGILIEQYEAKFPIWLAPYQIILLSIT------DRNIE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C K ++ G D E+IG + A L PL ++G K V ++ Sbjct: 553 KCLKFNELINNNGYRSKVDIRNEKIGYKIREATLGRVPLIAVIGDKEEEIDSVALRALNG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 +L + Sbjct: 613 KNLGIFNLPNLFKLMDELIEKK 634 >gi|255071699|ref|XP_002499524.1| predicted protein [Micromonas sp. RCC299] gi|226514786|gb|ACO60782.1| predicted protein [Micromonas sp. RCC299] Length = 613 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 73/429 (17%), Positives = 143/429 (33%), Gaps = 36/429 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD L L + G+ W P G D + ++ G + Sbjct: 210 EAARRDHRKVGKDLNLFSIQQEDVGGGLVFWHPKGALMRDMIERFWKDIHLERGYDLLYT 269 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + DLW SG D Y + M R D D+ P + +++ SYR+LP Sbjct: 270 PHVGKLDLWKTSGHADFYSENMYRPIDVEDETYQLKPMNCPFHVAVYKDGYFSYRDLPIR 329 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + ++ +R E G+ R R F DA+ F L + + L + + Sbjct: 330 WAEMGTVYRYERSGTMHGLFRVRGFTQDDAHIFCLPDQIADE-----IKGVLDLTEDILS 384 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 EF V T + + D + + E Sbjct: 385 TF-------------GFKEFEVNLSTQPEKSVGGPEIWDKAEGALKDALAQKGWDYEVDE 431 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D+ K+ D++ + S ++ F ++ L A + K Sbjct: 432 GGGAFYGPKIDI---KILDAIGRKWQCSTVQLD----FNLPERFDL---AYIDKENVKQR 481 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + + G++ ++ + +P +AP ++ L+ + D ++ Sbjct: 482 PIMIHRAIFGSLERFFGILT---ENYAGAFPLWIAPTQVRLLPVT---DAVDDYVQETAR 535 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +L G E++ A+ P+ +VG + D + ++ G + +S Sbjct: 536 KLRAAGIRCDV-QSQERLAKLVRNAEKAKIPVMCVVGEQEAKDGTLAVRTYADGDQGVLS 594 Query: 431 LEEVINYAS 439 +++V+ S Sbjct: 595 VDDVVARIS 603 >gi|289426352|ref|ZP_06428095.1| proline--tRNA ligase [Propionibacterium acnes SK187] gi|289153080|gb|EFD01798.1| proline--tRNA ligase [Propionibacterium acnes SK187] Length = 585 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 107/272 (39%), Positives = 156/272 (57%), Gaps = 6/272 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 4 RMSQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 64 ASIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y Sbjct: 124 YSSYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +RIF+RLG ++A SGP+GG S EF+ +A GE S + + D Sbjct: 184 IRIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGEDTFVRSSGGYAANVEAVRVAVPD 243 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + ++ P A D + + +SL Sbjct: 244 PLPID------GLPEAEVVDTPDARTIESLVR 269 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 4/188 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 DV + D P+ + ARGIE+GHIF G KY+ + +GK V MG Sbjct: 399 GVIDVAEIREGDPAPDGSGELHLARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMG 458 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R VAA+ E + D KG+ WP VAP+ + ++ ++ + +I + L++ Sbjct: 459 SYGLGVSRAVAAIAEGTCDEKGLCWPREVAPYDVQVLATGKGTEILDE-ATRIASELAEA 517 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD G +FA +++LG P V+VG + + D VE++ R TG +S+ E + Sbjct: 518 GLEVLLDDRKASPGVKFADSEILGMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAV 576 Query: 436 NYASHRFS 443 Sbjct: 577 CAVLKEVR 584 >gi|296129629|ref|YP_003636879.1| threonyl-tRNA synthetase [Cellulomonas flavigena DSM 20109] gi|296021444|gb|ADG74680.1| threonyl-tRNA synthetase [Cellulomonas flavigena DSM 20109] Length = 670 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 67/457 (14%), Positives = 133/457 (29%), Gaps = 49/457 (10%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD ++L L + + G+ + P G + R + G Sbjct: 249 YLERIAEAERRDHRKLGNELDLFS-FPEEIGSGLAVFHPKGGIIRMEMEEYSRRRHVQAG 307 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEV 113 ++ P + L+ SG D Y M R + P + + Sbjct: 308 YSFVNSPHITKEQLFQISGHLDWYADGMYPPMQLDEERDAEGHVKRQGQNYYLKPMNCPM 367 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IF + +SYR LP ++ +R E G+ R+R F DA+ + + Sbjct: 368 HNLIFAARGRSYRELPLRLFEFGTVYRYEKSGVVHGMTRARGFTQDDAHIYCTREQMKDE 427 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 + L + GL + + S D D Sbjct: 428 L-TSLLTFVLDLLKDYGLDDFYLELSTRNPEKS----------------VGSDDVWDEAT 470 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y + + D++ ++S ++ F Sbjct: 471 ETLREVAEASGLELVPDPGGAAFYGPKI---SVQAKDAIGRTWQMSTIQLD----FNLPE 523 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 ++ + DG + G++ AV+ + G W V + + Sbjct: 524 RF----ELEYTAPDGTRQRPVMIHRALFGSIERFFAVLTEHYAGAFPAWLAPVQVLAVPV 579 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + +++ RL G D ++ G + A P +I G + Sbjct: 580 A------EPFEPYLQQVVDRLRAQGVRAEVDRSDDRFGKKIRNASTQKIPFVLIAGGEDA 633 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 V ++R + ++E + + V Sbjct: 634 DAGAVSFRYRDGRQDNGVPVDEAVERIVAAVRDRVQV 670 >gi|188994826|ref|YP_001929078.1| threonyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277] gi|238691475|sp|B2RJD6|SYT_PORG3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|188594506|dbj|BAG33481.1| threonyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277] Length = 653 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 69/436 (15%), Positives = 142/436 (32%), Gaps = 36/436 (8%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L G+ WLP G + + +++ Q G ++ P Sbjct: 239 AKKRDHRKIGKELELFA-FSQNVGAGLPLWLPRGTQLRLRLEDFLKQIQKHFGYQQVITP 297 Query: 73 TLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 + + +L++ SG Y YG++ R + + + P + +IF+ SYR+LP Sbjct: 298 HIGNKNLYITSGHYAKYGQDSFRPINTPQEGEEFMLKPMNCPHHCEIFKITPHSYRDLPI 357 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + +R E G+ R R F DA+ F + + M + ++ Sbjct: 358 RLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQLKEEFCKVMDIIFIIFKALDF 417 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + + + S++ + + ++ I Sbjct: 418 KNFEAQISLRDKVNRE--------------KYIGSEENWERAERAIIEACEEKGLPAVIE 463 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D + D+L ++ ++ + G D K Sbjct: 464 YGEAAFYGPKLDFM---VKDALGRRWQLGTIQVDYNLP--------ERFDLEYTGEDNKK 512 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 H + G+M AV+ GK +W + + + + ++ Sbjct: 513 HRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LTPDQVVVLPVSERFNEYAHRV 566 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 L++ V DD E++G + +L P +IVG + +V ++ + G Sbjct: 567 AKELNQRDIRVQVDDRNEKVGRKIRDNELKRIPYMLIVGENESREEEVSVRKQGEGDMGI 626 Query: 429 MSLEEVINYASHRFSN 444 M + + Sbjct: 627 MKITTFAELIEKEVDD 642 >gi|291060195|gb|ADD72930.1| threonyl-tRNA synthetase [Treponema pallidum subsp. pallidum str. Chicago] Length = 582 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 140/442 (31%), Gaps = 38/442 (8%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L + E R D L L + + + G W P G + +R + G Sbjct: 172 YLRMQDEAKRRDHRKLGPALGLF--HLDEENPGQVFWHPEGWTLYVAIQQYLRRVMHEDG 229 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW SG +D Y M L + ++ P + +IF+ +SY Sbjct: 230 YAEVHTPFVMPQSLWERSGHWDKYRANM-YLTEGEKRSFALKPMNCPGHVEIFKQKTRSY 288 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E GVMR R F+ DA+ F + + Sbjct: 289 RDLPLRLSEFGSCTRNEPSGSLHGVMRVRGFVQDDAHIFCTEAQIASEV----------- 337 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + A G + V T Q D + + Sbjct: 338 -----TRFCRLLARVYADFGFAQEQIRVKFSTRPEQRIGDDATWDRAERALAEACEAAGL 392 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D+L + ++ + ++A + G Sbjct: 393 SYEHAPGEGAFYGPKLEF---ALIDTLEREWQCGTIQVDY----QLPSC--ERLNAEYVG 443 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + H + IG++ ++ + G W V I + + Sbjct: 444 EDNQRHMPVILHRTVIGSLERFIGILIEHYGGAFPPWLAPVQAVVIPVAP------AFLE 497 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L V D E++ ++ A P +IVG + + +V ++ R T Sbjct: 498 YAQHVARELCARSLRVQADVSAERMNAKIRTAQTQKVPYLLIVGERELRAQQVAVRPR-T 556 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G + M L + + Sbjct: 557 GPQHSMGLSAFSTFLLAKLETR 578 >gi|183221968|ref|YP_001839964.1| prolyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912036|ref|YP_001963591.1| prolyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|226701304|sp|B0SDM9|SYP_LEPBA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701305|sp|B0SM58|SYP_LEPBP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|167776712|gb|ABZ95013.1| Prolyl-tRNA ligase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780390|gb|ABZ98688.1| Prolyl-tRNA synthetase (Proline--tRNA ligase; ProRS) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 586 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 124/393 (31%), Positives = 193/393 (49%), Gaps = 5/393 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S Y +P +E+P+DA +ASHKLM+R G+I + + G+YS+LPLG + L + I+R+E Sbjct: 1 MKASSYLIPTAKEDPQDAVVASHKLMMRAGLIRKSAAGLYSYLPLGLRVLRKIEGIVRKE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G +E +P L +++W ESGR+D GKEM RL DR+D GPTHEE + + Sbjct: 61 MDKAGGLEFQLPILTPSEIWKESGRWDKMGKEMFRLKDRHDNESCLGPTHEESFCVLVKP 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY++LP YQI KFRDE+RPRFGV+RSREF MKDAYSF L E +Y M + Sbjct: 121 MVRSYKDLPINVYQIHTKFRDEIRPRFGVIRSREFTMKDAYSFHLDDESLDKTYQTMRKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSENTDF 239 Y RIF +GL +IP++A+SG +GG S EF+V++ GE + C I Sbjct: 181 YRRIFAGMGLTTIPVQADSGNMGGSASEEFMVVSPIGEETLTICPSCHYSGNIEKTPVIV 240 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI--EVGHIFYFGTKYSLP 297 + + + A + F + E + A + + +I F Sbjct: 241 NRNATKQVFDGKGKLHTPAKKSITEVAEFLNTKEENLLKAVAVVADGQYILVFLEGDREL 300 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 K G + MG + + +V I + A + I Sbjct: 301 NENKLKNHLGCNELRPMGPAEMEKLGLVPGFIGPGFPKSESLKIYIDALLDWNFSYIAGG 360 Query: 358 DQVCRDAC-EKIYARLSKVGCDVFWDDMGEQIG 389 +++ ++ + + D ++G Sbjct: 361 NEIDHHIAGVQLTSIFKEEEV-TKIDISQAKVG 392 Score = 139 bits (351), Expect = 8e-31, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 98/197 (49%), Gaps = 6/197 (3%) Query: 252 WTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 + D+ K+ D P + +GIEVGHIF G KYS T GK Sbjct: 376 FKEEEVTKIDISQAKVGDPCPSCGTGLTAEKGIEVGHIFKLGQKYSKAFDITVLNDKGKA 435 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 MG YGIG R +A VIE +D KGI WP S+APF + L++I + E IY Sbjct: 436 TTTTMGCYGIGVNRCMATVIEQCNDEKGIFWPVSIAPFTVCLVSIAKNPDDIAKI-ETIY 494 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 L + G +V WDD G +F ++L+GFP+++ +G F+ +++ I R + + + Sbjct: 495 KSLVESGIEVLWDDRDLGPGFKFKDSELIGFPIRITLGKGFLEKNEITILDRKSMAEDTL 554 Query: 430 ---SLEEVINYASHRFS 443 + EE++ + + S Sbjct: 555 VYTTNEELVTHLKLKIS 571 >gi|322796311|gb|EFZ18882.1| hypothetical protein SINV_16250 [Solenopsis invicta] Length = 807 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 73/436 (16%), Positives = 137/436 (31%), Gaps = 44/436 (10%) Query: 14 NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 RD + L H+ S G + P G + + IR E + G E+ P Sbjct: 405 AKRDHRKIGKEQELY--FFHELSPGSCFFQPRGAYIYNTLMEFIRSEYRKRGFQEVITPN 462 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + ++ LW SG + Y + M D + P + IF +S+R LP Sbjct: 463 IYNSKLWQTSGHWQHYAENMFSF-DVEKETFALKPMNCPGHCLIFDVRCRSWRELPLRLA 521 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 + R+EL G+ R R F DA+ F + + ++ LG Sbjct: 522 DFGVLHRNELSGALTGLTRVRRFQQDDAHIFCSIEQIKDE-ISGALDFLWHVYSVLGFTF 580 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 + P E + + + S+ + Sbjct: 581 NLC-LSTRPEKFMGDIE-----------------VWNEAEKALEESLNAFGQPWSLNPED 622 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + D+L + + ++ F ++ + ++ G+ Sbjct: 623 GAFYGPKIDI---TIMDALKRAHQTATIQLD----FQLPIRF----NLSYVNEAGEKTRP 671 Query: 313 QMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + I R++A V ES A D ++ Sbjct: 672 VIIHRAILGSVERMIAIVTESYGGKWPYWLSPRQAMVVPVA-------SQFDDYAYEVKQ 724 Query: 371 RLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +L G V D D + + + A L F ++VG K + V ++ R + ++ Sbjct: 725 KLWDAGVMVEVDTDSSDTLNKKIRNAQLAQFNFILVVGEKERNAGTVNVRTRDNTVHGEI 784 Query: 430 SLEEVINYASHRFSNN 445 +++E+I Sbjct: 785 AVDELIVKLKVLKETR 800 >gi|220906778|ref|YP_002482089.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7425] gi|254782895|sp|B8HNJ7|SYP_CYAP4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|219863389|gb|ACL43728.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7425] Length = 613 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 120/268 (44%), Positives = 164/268 (61%), Gaps = 4/268 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+E+P +AEI SHKL+LR G I + G+Y++LPL + L V+ I+R+E Sbjct: 1 MRLSQMLFVTLREDPAEAEIPSHKLLLRAGYIRRIGSGVYAYLPLMWRVLGKVSQIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N GA E +P +Q A+LW ESGR+D+Y K M L DR D+ + GPTHEEV+T I Sbjct: 61 MNAAGAQECLLPQIQPAELWQESGRWDTYTKAEGIMFALTDRQDRQLGLGPTHEEVITTI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I++YR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSFD E + +Y KM Sbjct: 121 ARDLIRTYRQLPQNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFDADVESLRVAYGKM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y I R GLK + A+SG IGG S EF+VLAD GE +V ++D + E Sbjct: 181 HQAYCNILQRCGLKYRAVDADSGAIGGSGSQEFMVLADAGEDEVLYTEDGR-YAANVEKA 239 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNE 265 + + S + ++ +D ++ Sbjct: 240 ISLPVDAEPSGLTKFEKRETPGTDTIDK 267 Score = 164 bits (414), Expect = 4e-38, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 99/172 (57%), Gaps = 1/172 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 PE +ARGIE+GHIF GTKYS M AT+ G++ + MG YGIG R+ A +E Sbjct: 438 PEQTLKTARGIEIGHIFQLGTKYSQAMGATYTNEQGEEVPLVMGCYGIGVSRLAQAAVEQ 497 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 S+D GIIWP ++AP++ ++ ++ +A ++Y L+ G + DD E+ G + Sbjct: 498 SYDKDGIIWPVAIAPYQAIVVIPNLNETTQVEAATQLYQDLNAAGIETLLDDRNERAGVK 557 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 F ADL+G P +++ G + ++ KVE+ R + +++L++VI + Sbjct: 558 FKDADLIGIPYRIVTG-RSLAQGKVEVVQRASRSSTEIALDQVIPTLKEWIA 608 >gi|328543265|ref|YP_004303374.1| Threonyl-tRNA synthetase [polymorphum gilvum SL003B-26A1] gi|326413011|gb|ADZ70074.1| Threonyl-tRNA synthetase [Polymorphum gilvum SL003B-26A1] Length = 654 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 77/435 (17%), Positives = 144/435 (33%), Gaps = 40/435 (9%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E RD ++ L + G+ W G ++ A +R Sbjct: 230 KAYLHMLEEAEKRDHRKLGREMDLF--HFQEEGPGVVFWHAKGWSLFQSLVAYMRRRL-A 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-----MIYGPTHEEVMTDIF 118 E++ P + LW SG + Y + M + + +A P + IF Sbjct: 287 ADYDEVNAPQILDTSLWETSGHWGWYKENMFAVQCADTEAEDTRLFALKPMNCPGHVQIF 346 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + +KSYR+LP + + R E G+MR R F DA+ F + + Sbjct: 347 KHGLKSYRDLPLRMAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTEEQLAAECLKIN 406 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 L ++ G + I ++ + P S A+ E K D T Sbjct: 407 -DLILSVYQDFGFEEIVVKLSTRPEKRVGSDALWDHAE--EVMTRVLKQIEDQSGGRIKT 463 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + A Y + L D++ + ++ FG Sbjct: 464 GI---------LPGEGAFYGPKFEY---TLRDAIGREWQCGTTQVDFNLPERFG------ 505 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + DG+ + G+M ++ + G +W ++ Sbjct: 506 --AFYVDKDGEKKTPVMVHRAICGSMERFLGILIENFAGHFPLWLAPRQVVVATIT---- 559 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++++A L+K G D E+I + L P+ ++ G + + V Sbjct: 560 --SEADDYAKEVHAALTKAGLRADLDLRNEKINYKVREHSLAKTPVILVCGKREAEERTV 617 Query: 417 EIKHRLTGIREDMSL 431 ++ + M L Sbjct: 618 NVRRLGKADQVAMGL 632 >gi|257084658|ref|ZP_05579019.1| prolyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|256992688|gb|EEU79990.1| prolyl-tRNA synthetase [Enterococcus faecalis Fly1] Length = 572 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 106/235 (45%), Positives = 146/235 (62%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+++LR G I Q + GIYS+LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAAGIYSYLPLANRVLEKLKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P L A+LW ESGRY++YG + RL DRND+ I GPTHEE T++ R Sbjct: 61 FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEETFTELIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPR G++R REF+MKD YSF SY + Sbjct: 121 EINSYKRLPLNLYQIQTKYRDEKRPRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R GL+ + + G +GG S EF+ +++ GE + C D+ E Sbjct: 181 YSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTI-CYSTESDYAANLE 234 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 65/187 (34%), Positives = 107/187 (57%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ + D P+ V +GIE+GHIF GT+YS M AT +G++ V MG Y Sbjct: 382 EDLRFVQEGDPSPDGNGVLAFTKGIEIGHIFKLGTRYSDAMGATVLDENGREKSVIMGCY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E + D +GI WP +APF + ++ + D+ +++ A +++ G Sbjct: 442 GIGVSRLLSAIVEQNADERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGY 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V DD E+ G +FA ADL+G P+++ VG K V D VE+K + TG ++ EE+ + Sbjct: 502 EVLVDDRNERAGVKFADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEELEST 560 Query: 438 ASHRFSN 444 S + Sbjct: 561 LSILMNT 567 >gi|53803705|ref|YP_114445.1| prolyl-tRNA synthetase [Methylococcus capsulatus str. Bath] gi|81823621|sp|Q606K3|SYP_METCA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|53757466|gb|AAU91757.1| prolyl-tRNA synthetase [Methylococcus capsulatus str. Bath] Length = 583 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 127/235 (54%), Positives = 168/235 (71%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L L+E P DAEI SH+LMLR G+I + + G+Y+WLPLG K L V ++REE Sbjct: 1 MRTSQFPLNTLKEIPSDAEIVSHQLMLRAGLIRKLAAGLYTWLPLGLKVLRRVERVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA+E+ +P +Q A+LW ESGR++ YG E+ RL DR+D+A GPTHEE++TD+ R+ Sbjct: 61 MDRAGALEVLMPVVQPAELWQESGRWEQYGPELARLHDRHDRAFCLGPTHEEIITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSYR LP FYQIQ KFRDE+RPRFGVMR+REF+MKDAYSF L E +Y+ M+V+ Sbjct: 121 ELKSYRQLPVNFYQIQTKFRDEIRPRFGVMRAREFVMKDAYSFHLDQESLAQTYDAMYVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF RLGL+ P+ A++G IGG SHEF VLAD+GE + D+ E Sbjct: 181 YSNIFSRLGLRFRPVLADTGAIGGSHSHEFHVLADSGEDAIAF-STVSDYAANVE 234 Score = 166 bits (420), Expect = 7e-39, Method: Composition-based stats. Identities = 68/189 (35%), Positives = 104/189 (55%), Gaps = 3/189 (1%) Query: 260 SDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ N D P+ ARGIEVGHIF GTKYS ++AT +G+ + MG Y Sbjct: 395 CDLRNVVEGDPSPDGLGTLRIARGIEVGHIFQLGTKYSAALNATVLNEEGRSQVMLMGCY 454 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVG 376 GIG RVVAA IE +HD +GI+WP+++APF+++L I R E++YA LS G Sbjct: 455 GIGVSRVVAAAIEQNHDERGIVWPEALAPFQVALCPINMQTSARVRTTAERLYAELSAAG 514 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V +DD + G FA +L+G P ++++ + + +E K R + + ++ VI Sbjct: 515 FEVLYDDRKVRPGVMFADMELIGIPHRIVISERGLDSGALEYKGRRDADNQSIGIDGVIE 574 Query: 437 YASHRFSNN 445 + R + Sbjct: 575 FLRERSESR 583 >gi|303232756|ref|ZP_07319441.1| proline--tRNA ligase [Atopobium vaginae PB189-T1-4] gi|302481242|gb|EFL44317.1| proline--tRNA ligase [Atopobium vaginae PB189-T1-4] Length = 574 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 115/266 (43%), Positives = 164/266 (61%), Gaps = 5/266 (1%) Query: 1 MR----RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAI 56 M+ S+ + P L+ENP DA+IASH+L+ R GMI + + G+Y++LPL +++ + I Sbjct: 1 MKRYATMSRLYAPTLKENPVDADIASHRLLCRAGMIRKAASGLYTYLPLAWRSILKIEGI 60 Query: 57 IREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTD 116 IR+E EM P L SA+LW +SGR+D YG E++RL DR+D GPTHEE D Sbjct: 61 IRDEMEAIDCQEMLTPILTSAELWHQSGRWDVYGPELMRLTDRHDHEYALGPTHEETYVD 120 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 + RS ++SY+ LP T Y IQ KFRDE RPRFG+MRSREF+MKDAYSF T E + Y+ Sbjct: 121 LVRSELRSYKQLPVTLYHIQDKFRDERRPRFGLMRSREFIMKDAYSFCATQESLQQCYDD 180 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSE 235 +Y + R G++++P+ A+SG IGGD S EF+ LAD GE + V+C + Sbjct: 181 QKQAYANVARRCGIRALPVVADSGQIGGDTSVEFMALADAGEAELVYCDSCGYAADAEAA 240 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSD 261 T + + +++ P +T D Sbjct: 241 TTRIAIENTTQTTLKKVHTPQCSTID 266 Score = 166 bits (420), Expect = 7e-39, Method: Composition-based stats. Identities = 74/203 (36%), Positives = 109/203 (53%), Gaps = 2/203 (0%) Query: 249 VEQWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 V DV + + D P SARGIE+ +F GTKYS M ATF D Sbjct: 371 VPGRDFELGEYVDVVSAQAGDGCPRCAASLKSARGIEISQVFQLGTKYSSAMGATFMDED 430 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 G + MG YGIG R +AAV+E +D GIIWP SVAP+++ +I + +D V Sbjct: 431 GTEKPFIMGCYGIGVSRTLAAVVEQHYDDHGIIWPISVAPYEVEVIALDTNDDVIWPQAT 490 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 I +L+ G +V DD + G +F ADL+GFP QV+ G K + VE+K R G R Sbjct: 491 AIAEKLTARGIEVIVDDRELRPGVKFNDADLMGFPYQVVCGKKALERGCVELKCRADGSR 550 Query: 427 EDMSLEEVINYASHRFSNNRPVL 449 +++L+ +++ R ++++ +L Sbjct: 551 VEVALDAIVSELEQRIAHDKELL 573 >gi|226226691|ref|YP_002760797.1| threonyl-tRNA synthetase [Gemmatimonas aurantiaca T-27] gi|226089882|dbj|BAH38327.1| threonyl-tRNA synthetase [Gemmatimonas aurantiaca T-27] Length = 660 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 76/447 (17%), Positives = 143/447 (31%), Gaps = 46/447 (10%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 ++ + + RD + L L I + G W P G + + +RE Q Sbjct: 235 QHLHNLEEAKKRDHRVLGKALGLFQ--IFPQAPGAAFWTPKGTTLYNTLEGFVRERQQEA 292 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRN--DKAMIYGPTHEEVMTDIFRSHI 122 E+ P L + LW +SG + Y + M + D + M P + +F S Sbjct: 293 -FQEIKTPLLYNKKLWEQSGHWGKYKENMFLVLDNETGEHDMSLKPMNCPSHHVLFASEK 351 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR +P F + R+EL G+ R R+F D + + L + + + Sbjct: 352 HSYRQMPVRFVTFDVLHRNELSGALSGLTRVRQFSQDDCHVY-LREDQIESEVKFLMDFI 410 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L + GLK+ A + P S E D + + Sbjct: 411 LSYYDTFGLKANLKFA-TRPEQRIGSDE-----------------LWDRAEAALKAALES 452 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D + DS+ ++ ++ Sbjct: 453 TGRSYEMKEGDGAFYGPKIDFD---VTDSIGRAWQLGTIQLDYNAP--------ERFELA 501 Query: 302 FKGADGKDHYVQMGSYGIG--AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G D H + + R +A +IE + I+ AH Q Sbjct: 502 YTGEDNAPHRPVVIHRAVSGSFERFIAILIEHFAGAFPVWLAPEQVRVIPIAIDFNAHGQ 561 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + R+ G D E + + ++ P ++G + ++ V ++ Sbjct: 562 A-------LVDRMKAAGIRATLDARNETLNYRVREGEVEKVPYMCVIGRRESEENTVALR 614 Query: 420 HRLTGIREDM-SLEEVINYASHRFSNN 445 R G ++++ S + + + Sbjct: 615 TRGAGKKQEILSADAFLARLQDEVRSR 641 >gi|62185526|ref|YP_220311.1| threonyl-tRNA synthetase [Chlamydophila abortus S26/3] gi|73919780|sp|Q5L4T1|SYT_CHLAB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|62148593|emb|CAH64365.1| threonyl-tRNA synthetase [Chlamydophila abortus S26/3] Length = 635 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 79/441 (17%), Positives = 142/441 (32%), Gaps = 43/441 (9%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E RD + KL L + + S G+ + P G D + + G Sbjct: 227 LHQLKEAKKRDHRVLGMKLDLFSQ--QECSAGMPFFHPRGMIIWDALIGYWKRLHQLAGY 284 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P L S LW SG + +Y + M L D+ P + +++ + SY+ Sbjct: 285 KEIQTPQLMSRSLWEVSGHWSNYRENMYTLK-IEDEDYAIKPMNCPGCMLYYKTRLHSYK 343 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 P +I R E+ G+MR R F DA+ LTPE + + ++ Sbjct: 344 QFPLRIAEIGHVHRYEVSGALSGLMRVRAFHQDDAH-VFLTPEQVEEETLNILHLVSELY 402 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 GL+ + + P E S + + + + + Sbjct: 403 STFGLEY-HLELSTRP----------------EKATIGSDELWELATAALERALVNSHTP 445 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I A Y D+H K R + G I + A Sbjct: 446 FIINPGDGAFYGPKIDIHV----------KDAIQRTWQCGTI-QLDMFLPERFELEYTNA 494 Query: 306 DGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 G+ M + R + +IE + + Sbjct: 495 QGEKSTPVMLHRALFGSIERFLGILIEHFKGRFPLWLSPEHIRVITVA-------DRHQP 547 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +K+ K+G V DD E + + A + V +G + + + + I+ R Sbjct: 548 RAQKLATAWQKLGFVVTVDDSNESVSKKIRNAQNMQVNYMVTLGDREIEQNTLAIRTRDN 607 Query: 424 GIREDMSLEEVINYASHRFSN 444 + DM+ ++ +N ++ Sbjct: 608 RVLNDMTEDKFLNTLLEEKNS 628 >gi|168064726|ref|XP_001784310.1| predicted protein [Physcomitrella patens subsp. patens] gi|162664141|gb|EDQ50872.1| predicted protein [Physcomitrella patens subsp. patens] Length = 685 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 73/445 (16%), Positives = 143/445 (32%), Gaps = 38/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y + + RD + L H+ S G +LP G + + + A IR+E Sbjct: 278 LKEYLHNVEEAKKRDHRKLGQQQELF--FFHELSPGSCFFLPHGARIYNKLQAFIRDEYR 335 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G E+ P + + LW SG +Y M + + P + IF + Sbjct: 336 KRGYEEVVSPNMFNMQLWETSGHAANYKDNMFTF-EVEKQEFGLKPMNCPGHCLIFDHRV 394 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR LP + R+EL G+ R R F DA+ F + + Sbjct: 395 RSYRELPLRLADFGVLHRNELSGALSGLTRVRRFQQDDAHIFCMESQLLTE-VKGALDFL 453 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + G + + P E A+ + + Sbjct: 454 EFAYGVFGFTF-ELELSTRPEKYLGEIETWNRAEK-----------------ALEAALNA 495 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ +FD+L + + ++ F +++L S Sbjct: 496 FGKPWQINEADGAFYGPKIDI---TVFDALKRKFQCATIQLD----FQLPIRFNLSYSTE 548 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 ++ V + +G++ + A++ + + Sbjct: 549 --DEAKREKPVIIHRAILGSVERMFAILLEH------YAGKWPFWLSPRQCIVCPVSEKF 600 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 ++ ++ G D ++ + A L F ++VG + S +V I+ R Sbjct: 601 THYAVEVRDAINAAGYFCEADVTDRKLQKKIREAQLAQFNYILVVGEEETSKKQVNIRTR 660 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + S+ E++ + R Sbjct: 661 DNVVHGTKSVTELLADFQKETAEYR 685 >gi|282854645|ref|ZP_06263980.1| proline--tRNA ligase [Propionibacterium acnes J139] gi|282582227|gb|EFB87609.1| proline--tRNA ligase [Propionibacterium acnes J139] Length = 585 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 107/272 (39%), Positives = 156/272 (57%), Gaps = 6/272 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 4 RMSQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 64 ANIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y Sbjct: 124 YSSYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +RIF+RLG ++A SGP+GG S EF+ +A GE S + + D Sbjct: 184 IRIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGEDTFVRSSGGYAANVEAVRMAVPD 243 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + ++ P A D + + +SL Sbjct: 244 PLPID------GLPEAEVVDTPDARTIESLVR 269 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 4/188 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 DV + D P+ + ARGIE+GHIF G KY+ + +GK V MG Sbjct: 399 GVIDVAEIREGDLAPDGSGELHLARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMG 458 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R VAA+ E + D KG+ WP VAP+ + ++ ++ + +I + L++ Sbjct: 459 SYGLGVSRAVAAIAEGTCDEKGLCWPREVAPYDVQVLATGKGTEILDE-ATRIASELAEA 517 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD G +FA +++LG P V+VG + + D VE++ R TG +S+ E + Sbjct: 518 GLEVLLDDRKASPGVKFADSEILGMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAV 576 Query: 436 NYASHRFS 443 Sbjct: 577 CAVLKEVR 584 >gi|15899227|ref|NP_343832.1| threonyl-tRNA synthetase [Sulfolobus solfataricus P2] gi|229578099|ref|YP_002836497.1| threonyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14] gi|229583311|ref|YP_002841710.1| threonyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51] gi|22654132|sp|Q97VW8|SYT_SULSO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|259516740|sp|C3NMY1|SYT_SULIN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|259516744|sp|C3N9B3|SYT_SULIY RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|13815789|gb|AAK42622.1| Threonyl-tRNA synthetase (thrS) [Sulfolobus solfataricus P2] gi|228008813|gb|ACP44575.1| threonyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14] gi|228014027|gb|ACP49788.1| threonyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51] Length = 545 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 154/443 (34%), Gaps = 39/443 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + D + KL L + + G+ + P GQ + + A +RE + G Sbjct: 128 YLSWLEKAEETDHRLIGEKLDLFSFH-EEAGSGLVLFHPKGQTIRNELIAFMREINDSMG 186 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ + D+W SG Y Y +++ + + P + I++S ++Y Sbjct: 187 YQEVYTSHVFKTDIWKISGHYTLYRDKLI-VFNMEGDEYGVKPMNCPAHILIYKSKPRTY 245 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F + +R E + +G++R R F+ D + F + + + + Sbjct: 246 RDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIFLREDQLREEIKMLISKTVEVW 305 Query: 185 FHR-LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I + P S E + + + + Sbjct: 306 HKFGFKDDDIKPYLSTRPDESIGSDE-----------------LWEKATNALISALQESG 348 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E+ A Y D ++ DSL ++S ++ F ++ + Sbjct: 349 LKFGIKEKEGAFYGPKIDF---EIRDSLGRWWQLSTIQVD----FNLPERF----KLEYI 397 Query: 304 GADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG K V + G++ A++ GK W ++ ++ ++ I Sbjct: 398 DKDGIKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTW---LSSVQVRVLPIT---DEVN 451 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + EK+ + K D GE + + A G P +IVG K S+ V ++ R Sbjct: 452 EYAEKVLNDMRKRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARG 511 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 ++ E+ + + Sbjct: 512 NIEVRNVKFEKFLELLITEIAQR 534 >gi|319401447|gb|EFV89657.1| prolyl-tRNA synthetase [Staphylococcus epidermidis FRI909] Length = 567 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 119/289 (41%), Positives = 170/289 (58%), Gaps = 5/289 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P ++E P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N++ IIREE Sbjct: 1 MKQSKVFIPTMREVPAEAEALSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNISKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T + R Sbjct: 61 MESIDAVEILMPALQQAELWEESGRWSAYGPELMRLKDRNGREFALGPTHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ K+RDE RPRFG++R REFLMKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPLTLFQIQSKYRDEKRPRFGLLRGREFLMKDAYSFHFDEASLDATYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+G+ + P+ A+SG IGG +HEF+ L++ GE + + D+ E + Sbjct: 181 YSRIFKRVGINARPVVADSGAIGGSHTHEFMALSEIGEDTIVY-SNESDYAANIEKAEVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY 289 S + N K + E I IF Sbjct: 240 YHPSHKHS----ALAELTKVETPNVKTAQEVAEYLERPLDEIVKAMIFK 284 Score = 149 bits (376), Expect = 1e-33, Method: Composition-based stats. Identities = 67/166 (40%), Positives = 99/166 (59%), Gaps = 2/166 (1%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E ++D GIIW Sbjct: 404 GIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGVSRTLSAIVEQNNDENGIIW 463 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P SV PF I LI I R +++Y +L DV +DD E+ G +F +DL+G Sbjct: 464 PKSVTPFDIHLITINPKKDDQRTLGDQLYQKLMDS-YDVLYDDRKERAGVKFNDSDLIGL 522 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 P++V+VG + + VE+K R+ G+ E++ ++E+ Y F N + Sbjct: 523 PVRVVVGKR-AEEGIVEVKQRINGLSEEVQVDELETYLQELFKNIK 567 >gi|34540737|ref|NP_905216.1| threonyl-tRNA synthetase [Porphyromonas gingivalis W83] gi|73919814|sp|Q7MVQ5|SYT_PORGI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|34397051|gb|AAQ66115.1| threonyl-tRNA synthetase [Porphyromonas gingivalis W83] Length = 653 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 69/436 (15%), Positives = 142/436 (32%), Gaps = 36/436 (8%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L G+ WLP G + + +++ Q G ++ P Sbjct: 239 AKKRDHRKIGKELELFA-FSQNVGAGLPLWLPRGTQLRLRLEDFLKQIQKHFGYQQVITP 297 Query: 73 TLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 + + +L++ SG Y YG++ R + + + P + +IF+ SYR+LP Sbjct: 298 HIGNKNLYITSGHYAKYGQDSFRPINTPQEGEEFMLKPMNCPHHCEIFKITPHSYRDLPI 357 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + +R E G+ R R F DA+ F + + M + ++ Sbjct: 358 RLAEFGTVYRYEQSGELHGLTRVRGFTQDDAHLFCRPDQLKEEFCKVMDIIFIIFKALDF 417 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + + + S++ + + ++ I Sbjct: 418 KNFEAQISLRDKVNRE--------------KYIGSEENWERAERAIIEACEEKGLPAVIE 463 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D + D+L ++ ++ + G D K Sbjct: 464 YGEAAFYGPKLDFM---VKDALGRRWQLGTIQVDYNLP--------ERFDLEYTGEDNKK 512 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 H + G+M AV+ GK +W + + + + ++ Sbjct: 513 HRPVMIHRAPFGSMERFVAVLIEHTAGKFPLW------LTPDQVVVLPVSERFNEYAHRV 566 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 L++ V DD E++G + +L P +IVG + +V ++ + G Sbjct: 567 AKELNQRDIRVQVDDRNEKVGRKIRDNELKRIPYMLIVGENESREEEVSVRKQGEGDMGI 626 Query: 429 MSLEEVINYASHRFSN 444 M + + Sbjct: 627 MKITTFAELIEKEVDD 642 >gi|315032880|gb|EFT44812.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0017] gi|315150170|gb|EFT94186.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0012] Length = 572 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 106/235 (45%), Positives = 146/235 (62%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+++LR G I Q + GIYS+LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAAGIYSYLPLANRVLEKLKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P L A+LW ESGRY++YG + RL DRND+ I GPTHEE T++ R Sbjct: 61 FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEETFTELIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPR G++R REF+MKD YSF SY + Sbjct: 121 EINSYKRLPLNLYQIQTKYRDEKRPRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R GL+ + + G +GG S EF+ +++ GE + C D+ E Sbjct: 181 YSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTI-CYSTESDYAANLE 234 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 65/187 (34%), Positives = 107/187 (57%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ + D P+ V +GIE+GHIF GT+YS M AT +G++ V MG Y Sbjct: 382 EDLRFVQEGDPSPDGNGVLAFTKGIEIGHIFKLGTRYSDAMGATVLDENGREKSVIMGCY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E + D +GI WP +APF + ++ + D+ +++ A +++ G Sbjct: 442 GIGVSRLLSAIVEQNADERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGY 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V DD E+ G +FA ADL+G P+++ VG K V D VE+K + TG ++ EE+ + Sbjct: 502 EVLVDDRNERAGVKFADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEELEST 560 Query: 438 ASHRFSN 444 S + Sbjct: 561 LSILMNT 567 >gi|229549443|ref|ZP_04438168.1| prolyl-tRNA synthetase [Enterococcus faecalis ATCC 29200] gi|255972147|ref|ZP_05422733.1| prolyl-tRNA synthetase [Enterococcus faecalis T1] gi|257421971|ref|ZP_05598961.1| prolyl-tRNA synthetase [Enterococcus faecalis X98] gi|312953422|ref|ZP_07772262.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0102] gi|229305680|gb|EEN71676.1| prolyl-tRNA synthetase [Enterococcus faecalis ATCC 29200] gi|255963165|gb|EET95641.1| prolyl-tRNA synthetase [Enterococcus faecalis T1] gi|257163795|gb|EEU93755.1| prolyl-tRNA synthetase [Enterococcus faecalis X98] gi|310628631|gb|EFQ11914.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0102] gi|315152090|gb|EFT96106.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0031] gi|315155317|gb|EFT99333.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0043] gi|315159106|gb|EFU03123.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0312] gi|327535671|gb|AEA94505.1| proline--tRNA ligase [Enterococcus faecalis OG1RF] Length = 572 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 106/235 (45%), Positives = 146/235 (62%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+++LR G I Q + GIYS+LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAAGIYSYLPLANRVLEKLKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P L A+LW ESGRY++YG + RL DRND+ I GPTHEE T++ R Sbjct: 61 FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEETFTELIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPR G++R REF+MKD YSF SY + Sbjct: 121 EINSYKRLPLNLYQIQTKYRDEKRPRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R GL+ + + G +GG S EF+ +++ GE + C D+ E Sbjct: 181 YSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTI-CYSTESDYAANLE 234 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 65/187 (34%), Positives = 107/187 (57%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ + D P+ V +GIE+GHIF GT+YS M AT +G++ V MG Y Sbjct: 382 EDLRFVQEGDPSPDGNGVLAFTKGIEIGHIFKLGTRYSDAMGATVLDENGREKSVIMGCY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E + D +GI WP +APF + ++ + D+ +++ A +++ G Sbjct: 442 GIGVSRLLSAIVEQNADERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGY 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V DD E+ G +FA ADL+G P+++ VG K V D VE+K + TG ++ EE+ + Sbjct: 502 EVLVDDRNERAGVKFADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEELEST 560 Query: 438 ASHRFSN 444 S + Sbjct: 561 LSILMNT 567 >gi|227553916|ref|ZP_03983963.1| prolyl-tRNA synthetase [Enterococcus faecalis HH22] gi|255975215|ref|ZP_05425801.1| prolyl-tRNA synthetase [Enterococcus faecalis T2] gi|256617163|ref|ZP_05474009.1| prolyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|256763073|ref|ZP_05503653.1| prolyl-tRNA synthetase [Enterococcus faecalis T3] gi|256961317|ref|ZP_05565488.1| prolyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|256963555|ref|ZP_05567726.1| prolyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|257082033|ref|ZP_05576394.1| prolyl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|257416590|ref|ZP_05593584.1| prolyl-tRNA synthetase [Enterococcus faecalis AR01/DG] gi|257419837|ref|ZP_05596831.1| prolyl-tRNA synthetase [Enterococcus faecalis T11] gi|293383602|ref|ZP_06629512.1| proline--tRNA ligase [Enterococcus faecalis R712] gi|293387285|ref|ZP_06631842.1| proline--tRNA ligase [Enterococcus faecalis S613] gi|307271494|ref|ZP_07552766.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0855] gi|307277205|ref|ZP_07558309.1| prolyl-tRNA synthetase [Enterococcus faecalis TX2134] gi|307285834|ref|ZP_07565968.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0860] gi|312899806|ref|ZP_07759125.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0470] gi|312906152|ref|ZP_07765164.1| prolyl-tRNA synthetase [Enterococcus faecalis DAPTO 512] gi|312909497|ref|ZP_07768352.1| prolyl-tRNA synthetase [Enterococcus faecalis DAPTO 516] gi|227176902|gb|EEI57874.1| prolyl-tRNA synthetase [Enterococcus faecalis HH22] gi|255968087|gb|EET98709.1| prolyl-tRNA synthetase [Enterococcus faecalis T2] gi|256596690|gb|EEU15866.1| prolyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|256684324|gb|EEU24019.1| prolyl-tRNA synthetase [Enterococcus faecalis T3] gi|256951813|gb|EEU68445.1| prolyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|256954051|gb|EEU70683.1| prolyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|256990063|gb|EEU77365.1| prolyl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|257158418|gb|EEU88378.1| prolyl-tRNA synthetase [Enterococcus faecalis ARO1/DG] gi|257161665|gb|EEU91625.1| prolyl-tRNA synthetase [Enterococcus faecalis T11] gi|291079114|gb|EFE16478.1| proline--tRNA ligase [Enterococcus faecalis R712] gi|291083322|gb|EFE20285.1| proline--tRNA ligase [Enterococcus faecalis S613] gi|295113413|emb|CBL32050.1| prolyl-tRNA synthetase, family II [Enterococcus sp. 7L76] gi|306502595|gb|EFM71862.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0860] gi|306506135|gb|EFM75301.1| prolyl-tRNA synthetase [Enterococcus faecalis TX2134] gi|306511766|gb|EFM80764.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0855] gi|310627798|gb|EFQ11081.1| prolyl-tRNA synthetase [Enterococcus faecalis DAPTO 512] gi|311290170|gb|EFQ68726.1| prolyl-tRNA synthetase [Enterococcus faecalis DAPTO 516] gi|311293056|gb|EFQ71612.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0470] gi|315146006|gb|EFT90022.1| prolyl-tRNA synthetase [Enterococcus faecalis TX2141] gi|315146660|gb|EFT90676.1| prolyl-tRNA synthetase [Enterococcus faecalis TX4244] gi|315161730|gb|EFU05747.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0645] gi|315166430|gb|EFU10447.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1341] gi|315170318|gb|EFU14335.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1342] gi|315173646|gb|EFU17663.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1346] gi|315574384|gb|EFU86575.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0309B] gi|315580142|gb|EFU92333.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0309A] Length = 572 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 106/235 (45%), Positives = 146/235 (62%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+++LR G I Q + GIYS+LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAAGIYSYLPLANRVLEKLKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P L A+LW ESGRY++YG + RL DRND+ I GPTHEE T++ R Sbjct: 61 FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEETFTELIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPR G++R REF+MKD YSF SY + Sbjct: 121 EINSYKRLPLNLYQIQTKYRDEKRPRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R GL+ + + G +GG S EF+ +++ GE + C D+ E Sbjct: 181 YSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTI-CYSTESDYAANLE 234 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 65/187 (34%), Positives = 107/187 (57%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ + D P+ V +GIE+GHIF GT+YS M AT +G++ V MG Y Sbjct: 382 EDLRFVQEGDPSPDGNGVLAFTKGIEIGHIFKLGTRYSDAMGATVLDENGREKSVIMGCY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E + D +GI WP +APF + ++ + D+ +++ A +++ G Sbjct: 442 GIGVSRLLSAIVEQNADERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGY 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V DD E+ G +FA ADL+G P+++ VG K V D VE+K + TG ++ EE+ + Sbjct: 502 EVLVDDRNERAGVKFADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEELEST 560 Query: 438 ASHRFSN 444 S + Sbjct: 561 LSILMNT 567 >gi|156552955|ref|XP_001603180.1| PREDICTED: similar to threonyl-tRNA synthetase [Nasonia vitripennis] Length = 859 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 69/432 (15%), Positives = 145/432 (33%), Gaps = 42/432 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + IR E + G E+ Sbjct: 453 EEAAKRDHRKIGKEQELF--FFHELSPGSCFFQPRGAHIYNTLVEFIRGEYKKRGFQEVV 510 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + ++ LW SG + Y + M D + P + IF +S+R LP Sbjct: 511 TPNIYNSKLWQTSGHWQHYSENMFSF-DVEKETFALKPMNCPGHCMIFDVRNRSWRELPL 569 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + + ++ G Sbjct: 570 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTSEQIKDEM-LGALDFLDHVYSVFG 628 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 F + T + D + + D ++ Sbjct: 629 FT------------------FNLCLSTRPEKFLGEVAVWDAAEKALSESLDAFGKPWTLN 670 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + + ++ F ++ + + G+ Sbjct: 671 PGDGAFYGPKIDI---TIMDALKRAHQCATIQLD----FQLPIRF----NLNYVNETGEK 719 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + +G++ + A++ + WP ++P ++ +I + + + Sbjct: 720 TRPVIIHRAILGSVERMIAILT---ESYAGKWPFWLSPRQVMVIPVGPS---LDEYATQT 773 Query: 369 YARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 ++ G D D G+ + + A L F ++VG K + V ++ R + Sbjct: 774 RDKIHAAGFMTEVDTDHGDTLNKKIRNAQLDQFNFILVVGEKEKAAGTVNVRTRDNKVHG 833 Query: 428 DMSLEEVINYAS 439 ++ ++++I Sbjct: 834 EIGVDDLIQKFQ 845 >gi|229545199|ref|ZP_04433924.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1322] gi|256853721|ref|ZP_05559086.1| prolyl-tRNA synthetase [Enterococcus faecalis T8] gi|257079587|ref|ZP_05573948.1| prolyl-tRNA synthetase [Enterococcus faecalis JH1] gi|294779463|ref|ZP_06744861.1| proline--tRNA ligase [Enterococcus faecalis PC1.1] gi|307270862|ref|ZP_07552149.1| prolyl-tRNA synthetase [Enterococcus faecalis TX4248] gi|307287732|ref|ZP_07567775.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0109] gi|307291052|ref|ZP_07570938.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0411] gi|229309744|gb|EEN75731.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1322] gi|256710664|gb|EEU25707.1| prolyl-tRNA synthetase [Enterococcus faecalis T8] gi|256987617|gb|EEU74919.1| prolyl-tRNA synthetase [Enterococcus faecalis JH1] gi|294453469|gb|EFG21873.1| proline--tRNA ligase [Enterococcus faecalis PC1.1] gi|306497901|gb|EFM67432.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0411] gi|306501470|gb|EFM70773.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0109] gi|306512775|gb|EFM81420.1| prolyl-tRNA synthetase [Enterococcus faecalis TX4248] gi|315030982|gb|EFT42914.1| prolyl-tRNA synthetase [Enterococcus faecalis TX4000] Length = 572 Score = 223 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 106/235 (45%), Positives = 146/235 (62%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+++LR G I Q + GIYS+LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAAGIYSYLPLANRVLEKLKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P L A+LW ESGRY++YG + RL DRND+ I GPTHEE T++ R Sbjct: 61 FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEETFTELIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPR G++R REF+MKD YSF SY + Sbjct: 121 EINSYKRLPLNLYQIQTKYRDEKRPRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R GL+ + + G +GG S EF+ +++ GE + C D+ E Sbjct: 181 YSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTI-CYSTESDYAANLE 234 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 65/187 (34%), Positives = 107/187 (57%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ + D P+ V +GIE+GHIF GT+YS M AT +G++ V MG Y Sbjct: 382 EDLRFVQEGDPSPDGNGVLAFTKGIEIGHIFKLGTRYSDAMGATVLDENGREKSVIMGCY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E + D +GI WP +APF + ++ + D+ +++ A +++ G Sbjct: 442 GIGVSRLLSAIVEQNADERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGY 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V DD E+ G +FA ADL+G P+++ VG K V D VE+K + TG ++ EE+ + Sbjct: 502 EVLVDDRNERAGVKFADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEELEST 560 Query: 438 ASHRFSN 444 S + Sbjct: 561 LSILMNT 567 >gi|126695961|ref|YP_001090847.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301] gi|166225476|sp|A3PBX1|SYT_PROM0 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|126543004|gb|ABO17246.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301] Length = 638 Score = 223 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 136/442 (30%), Gaps = 40/442 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD K L I + S G+ W P G + IRE + Sbjct: 231 YLTRIEEAEKRDHRKLGKKHSLF--HIQEESPGMIFWHPNGWTIYQVLEKYIREILKKND 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P LW +SG ++ + +M ++ P + +F +KSY Sbjct: 289 YLEIKTPQAVDKSLWEKSGHWEKFRDDMFT-TASENRTYAIKPMNCPCHIQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 ++LP + R+E G+MR R F DA+ F T E + + + Sbjct: 348 KDLPIRLAEFGSCHRNEPSGALHGLMRVRNFTQDDAHIFC-TEEQIQEEVSTFIDLVFEV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ + P S+D D + D+ Sbjct: 407 YKTFGFDEIIIKLSTRPEKR-----------------VGSEDIWDKSEEALTKALDNKNL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ AT+ Sbjct: 450 KWELQPGEGAFYGPKIEF---SLKDCLSRVWQCGTIQVDFSMPIRLD--------ATYVD 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + + +G+ ++ ++ K IW +S+ + Sbjct: 499 IDNEKRNPVMLHRAILGSFERFIGILIEQYEAKFPIWLAPYQIILLSIT------DRNIE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 C K ++ G D E+IG + A L PL ++G K V ++ Sbjct: 553 KCLKFNELINNNGYRSKVDIRNEKIGYKIREATLGRVPLIAVIGDKEEEIDSVALRALNG 612 Query: 424 GIREDMSLEEVINYASHRFSNN 445 +L + Sbjct: 613 KNLGIFNLPNLFKLMDELIEKK 634 >gi|83859100|ref|ZP_00952621.1| threonyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633] gi|83852547|gb|EAP90400.1| threonyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633] Length = 613 Score = 223 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 76/446 (17%), Positives = 146/446 (32%), Gaps = 41/446 (9%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + ++ RD +L L T ++ + G+ WLP G D + + R ++R G Sbjct: 193 RLEEQAKRDHRKIGKELGLFT-LVEEVGAGLPMWLPAGNVIRDELEKLARITEHRAGYKR 251 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 +S P + DL+ SG Y ++M +++ P + I+ SYR+L Sbjct: 252 VSTPHITKGDLYHRSGHLPYYAEDMYAPIMIDEQEYYLRPMNCPHHHMIYAHDQWSYRDL 311 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P + +R E G+MR R F DA+ + + M + + Sbjct: 312 PVRLSEYGQVYRYEASGGLSGLMRVRGFCQNDAHIYCRPDQAKDEFLAVMHMHA-DYYRL 370 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 G++ MR + + + + D+ Sbjct: 371 FGIQDFWMRLSLPDME-------------NLDKYVDDAEGWKTALSILKQAMDESGYPYK 417 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 VE A Y D + + + + + DG Sbjct: 418 EVEGEAAFYGPKVDFMVKSVV-----------GTEYAISTNQLDFMATKRFNLVYTAEDG 466 Query: 308 KDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 V + +G+ AA + + GK W ++P + +I I + + + Sbjct: 467 SKQPVYVIHRAPMGSHERFAAFLIEHYAGKFPTW---LSPTQAVVIPIADRHE---EYAQ 520 Query: 367 KIYARL-------SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + +L G D E++ + A P ++VG + +V ++ Sbjct: 521 TVRDQLFFSEVDSVNTGIRTETDFASERMQKKIRNAQHRQIPYMLVVGDAEAENGEVAVR 580 Query: 420 HRLTGIREDMSLEEVINYASHRFSNN 445 HR G M +E++I + S Sbjct: 581 HRDHGDMGTMKVEDLIARIAKEQSGR 606 >gi|317052582|ref|YP_004113698.1| threonyl-tRNA synthetase [Desulfurispirillum indicum S5] gi|316947666|gb|ADU67142.1| threonyl-tRNA synthetase [Desulfurispirillum indicum S5] Length = 657 Score = 223 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 76/448 (16%), Positives = 149/448 (33%), Gaps = 43/448 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L + + + P G + + IRE Sbjct: 235 EYLFFLEEAKKRDHRKLGKELDLFH-FDPEVAVASPFFHPKGTVVYNQLLEFIREMYRYY 293 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + +LW SG YD+Y + M + + + P + I+ + +S Sbjct: 294 GYGEVITPQVMDVELWKRSGHYDNYVENM-YFTELDGQHNALKPMNCPTHVMIYGASSRS 352 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + R E G+ R R F DA+ F P+ + + L+ Sbjct: 353 YRDLPVRYADFGRLHRYERSGVVQGLTRVRTFCQDDAHIFCR-PDQIEDEIKNLIDLILK 411 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + + I + + P S E A++ + + + Sbjct: 412 TYKVFDFEDIAIGLSTRPEKSIGSDEIWQKAES-----------------ALAAALNSLS 454 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 SI E A Y D ++ D++ + +++ ++ FG A++ Sbjct: 455 VKFSINEGDGAFYGPKIDF---QVRDAIRRSWQLATVQLDFSMPQRFG--------ASYV 503 Query: 304 GADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G+ M + R + +E + + Sbjct: 504 DEQGQRQAPVMIHRAVLGSIERFMGLYLEHTAGALPFWLAPVQCSIIPV-------NDEL 556 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 C+++ L+++G V D E +G + + P ++VG K + + ++ Sbjct: 557 LPFCQQLRQILTRLGYRVEVDASSESMGKKIRRSQTQKHPYTLVVGKKELEERIFAVRAY 616 Query: 422 LTGIREDMSLEEVINYASHRFSNNRPVL 449 S EE++ NNR L Sbjct: 617 GHKDTFASSWEELLERFHQE--NNRARL 642 >gi|19553198|ref|NP_601200.1| prolyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032] gi|62390834|ref|YP_226236.1| prolyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032] gi|81847611|sp|Q8NP31|SYP_CORGL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|21324764|dbj|BAB99387.1| Prolyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032] gi|41326172|emb|CAF20335.1| PROBABLE PROLYL-TRNA SYNTHETASE PROTEIN [Corynebacterium glutamicum ATCC 13032] Length = 588 Score = 223 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 109/282 (38%), Positives = 155/282 (54%), Gaps = 5/282 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G I + + GIYSWLPLG +A+ N+ A++REE Sbjct: 4 RLSTLFLRTLREDPADAEVPSHKLLVRAGYIRRVAPGIYSWLPLGLRAVRNIEAVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ P L + + + R+ YG + RL DR + GPTHEE+ + Sbjct: 64 DAIGGQELLFPALLPREPYETTQRWTEYGDSLFRLKDRKGADYLLGPTHEEMFAATVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR GV+R REF+MKD+YSFD++ G SY K +Y Sbjct: 124 YNSYKDFPVTLYQIQTKYRDEERPRAGVLRGREFVMKDSYSFDISDAGLDESYAKHRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF RLGL+ +A SG +GG S EF+ +++ GE F ++ E Sbjct: 184 QRIFDRLGLEYAICQATSGAMGGSASEEFLAVSENGE-DTFVRSTSGNYAANVEAVVTQ- 241 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 + +E P A T + + D+L + IE Sbjct: 242 -PGVERDIEGL--PEAVTYETPVSETIDALVDWANSIDVQIE 280 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 93/192 (48%), Gaps = 6/192 (3%) Query: 258 ATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 + K D P E ARGIE+GHIF G KY+ +GK MG Sbjct: 399 GFIEAAEIKEGDPAPAGEGTLTLARGIEIGHIFQLGRKYTEAFDVQILDENGKRAIPTMG 458 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R++A + E HD G+ W VAP+++ ++ D +A E+ A LS Sbjct: 459 SYGLGVTRLLAVLAEQRHDDAGLNWSVEVAPYQVHVVAAN-KDAAAIEAAERFAAELSAA 517 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV +DD G +F A+LLG P +I+G + ++ KVE++ R G + ++ ++ Sbjct: 518 GLDVLFDDRPKVSPGVKFKDAELLGMPFALILG-RGYAEGKVELRVRG-GEKSELDADQA 575 Query: 435 INYASHRFSNNR 446 + + R Sbjct: 576 VAQIVEMVAQAR 587 >gi|257087410|ref|ZP_05581771.1| prolyl-tRNA synthetase [Enterococcus faecalis D6] gi|256995440|gb|EEU82742.1| prolyl-tRNA synthetase [Enterococcus faecalis D6] gi|315025439|gb|EFT37371.1| prolyl-tRNA synthetase [Enterococcus faecalis TX2137] Length = 572 Score = 223 bits (567), Expect = 6e-56, Method: Composition-based stats. Identities = 106/235 (45%), Positives = 146/235 (62%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+++LR G I Q + GIYS+LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAAGIYSYLPLANRVLEKLKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P L A+LW ESGRY++YG + RL DRND+ I GPTHEE T++ R Sbjct: 61 FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEETFTELIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPR G++R REF+MKD YSF SY + Sbjct: 121 EINSYKRLPLNLYQIQTKYRDEKRPRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R GL+ + + G +GG S EF+ +++ GE + C D+ E Sbjct: 181 YSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTI-CYSTESDYAANLE 234 Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 65/187 (34%), Positives = 106/187 (56%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ + D P+ V +GIE+GHIF GT+YS M AT +G++ V MG Y Sbjct: 382 EDLRFVQEGDPSPDGNGVLAFTKGIEIGHIFKLGTRYSDAMGATVLDENGREKSVIMGCY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E + D GI WP +APF + ++ + D+ +++ A +++ G Sbjct: 442 GIGVSRLLSAIVEQNADEHGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGY 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V DD E+ G +FA ADL+G P+++ VG K V D VE+K + TG ++ EE+ + Sbjct: 502 EVLVDDRNERAGVKFADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEELEST 560 Query: 438 ASHRFSN 444 S + Sbjct: 561 LSILMNT 567 >gi|301779664|ref|XP_002925249.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like [Ailuropoda melanoleuca] Length = 890 Score = 223 bits (567), Expect = 6e-56, Method: Composition-based stats. Identities = 78/446 (17%), Positives = 154/446 (34%), Gaps = 40/446 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD + L H S G +LP G + + IREE Sbjct: 473 KMMKTWEKFQEEAKNRDHRKIGKEQELF--FFHDLSPGSCFFLPRGAFIYNTLMDFIREE 530 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R E+ P + ++ LW SG + Y + M D P + IF Sbjct: 531 YHRRNFTEVLSPNMYNSRLWETSGHWQHYSENMFTF-DIEKDTFALKPMNCPGHCLIFAH 589 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R +P F + R+EL G+ R R F DA+ F + + N Sbjct: 590 RPRSWREMPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQ-IEEEINGCLQ 648 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E D Sbjct: 649 FLQSVYSTFGFSFQLN-LSTRPENFLGEVE-----------------LWDEAEKQLQNSL 690 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + A Y D+ K+ D++ + + ++ F +++L Sbjct: 691 VEFGKPWKMNPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRFNLTYV 743 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K + V + +G++ + A++ + G WP ++P ++ +I + Sbjct: 744 SK--DGDDKRNPVIIHRAILGSVERMIAILS---ENYGGKWPFWLSPRQVMVIPVGP--- 795 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C ++ + + G D D + + A L + ++VG K +++ V + Sbjct: 796 TCEKYALQVSSAFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKTNNAVNV 855 Query: 419 KHRLTGIREDMSLEEVINYASHRFSN 444 + R I ++S+ I+ + + Sbjct: 856 RTRDNKIHGEISVTSAIDKLKNLKKS 881 >gi|256956661|ref|ZP_05560832.1| prolyl-tRNA synthetase [Enterococcus faecalis DS5] gi|257090544|ref|ZP_05584905.1| prolyl-tRNA synthetase [Enterococcus faecalis CH188] gi|300861128|ref|ZP_07107215.1| proline--tRNA ligase [Enterococcus faecalis TUSoD Ef11] gi|312903702|ref|ZP_07762876.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0635] gi|256947157|gb|EEU63789.1| prolyl-tRNA synthetase [Enterococcus faecalis DS5] gi|256999356|gb|EEU85876.1| prolyl-tRNA synthetase [Enterococcus faecalis CH188] gi|300850167|gb|EFK77917.1| proline--tRNA ligase [Enterococcus faecalis TUSoD Ef11] gi|310632894|gb|EFQ16177.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0635] gi|315035640|gb|EFT47572.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0027] gi|315578695|gb|EFU90886.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0630] Length = 572 Score = 223 bits (567), Expect = 6e-56, Method: Composition-based stats. Identities = 106/235 (45%), Positives = 146/235 (62%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+++LR G I Q + GIYS+LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAAGIYSYLPLANRVLEKLKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P L A+LW ESGRY++YG + RL DRND+ I GPTHEE T++ R Sbjct: 61 FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEETFTELIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPR G++R REF+MKD YSF SY + Sbjct: 121 EINSYKRLPLNLYQIQTKYRDEKRPRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R GL+ + + G +GG S EF+ +++ GE + C D+ E Sbjct: 181 YSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTI-CYSTESDYAANLE 234 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 65/187 (34%), Positives = 106/187 (56%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ + D P+ V +GIE+GHIF GT+YS M AT +G++ V MG Y Sbjct: 382 EDLRFVQEGDPSPDGNGVLAFTKGIEIGHIFKLGTRYSDAMGATVLDENGREKSVIMGCY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E + D +GI WP +APF + ++ + D+ +++ A + + G Sbjct: 442 GIGVSRLLSAIVEQNADERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMIEAGY 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V DD E+ G +FA ADL+G P+++ VG K V D VE+K + TG ++ EE+ + Sbjct: 502 EVLVDDRNERAGVKFADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEELEST 560 Query: 438 ASHRFSN 444 S + Sbjct: 561 LSILMNT 567 >gi|254441196|ref|ZP_05054689.1| threonyl-tRNA synthetase [Octadecabacter antarcticus 307] gi|198251274|gb|EDY75589.1| threonyl-tRNA synthetase [Octadecabacter antarcticus 307] Length = 649 Score = 223 bits (567), Expect = 6e-56, Method: Composition-based stats. Identities = 76/443 (17%), Positives = 145/443 (32%), Gaps = 45/443 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD ++ L + + + G W P G + +R +Q Sbjct: 235 KAHLHMLEEAAKRDHRKLGREMNLF--HMQEEASGQIFWHPNGWLIFTQLQDYMRRKQRA 292 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G +E++ P + LW +SG ++ + + M + R P + I+ Sbjct: 293 GGYVEVNTPQVVDRKLWEQSGHWEKFQEHMFIVEVDEEHAREKAVNALKPMNCPCHVQIY 352 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F D + F + + Sbjct: 353 NQGLKSYRDLPVRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCTEEQIEVETIAF- 411 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 ++ LG ++ P S E D + Sbjct: 412 IALLSEVYQDLGFSDFKVKFSDRPDVRSGSDE-----------------VWDKAEAALLA 454 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 ++ A Y + L D++ + + ++ F + Sbjct: 455 ATRAAGIEPTLNPGEGAFYGPKLEF---VLTDAIGRDWQCGTHQVD----FVLPER---- 503 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + A + G+DG+ H + +G+ ++ H GK W S+I Sbjct: 504 LDANYIGSDGEKHRPVMLHRALLGSFERFIGILIEEHAGKLPFWLAPRQVVVASII---- 559 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++ A L+ G D E+I + L P+ + G++ V D V Sbjct: 560 --SDADDYVREVVAALNAKGVRAEADIRNEKINYKVREHSLGKVPVILACGAREVEDRTV 617 Query: 417 EIKHRLTGIREDMSLEEVINYAS 439 ++ +L +++ Sbjct: 618 SVRRLGEKQTSVTTLAAIVDDLQ 640 >gi|126735278|ref|ZP_01751024.1| threonyl-tRNA synthetase [Roseobacter sp. CCS2] gi|126715833|gb|EBA12698.1| threonyl-tRNA synthetase [Roseobacter sp. CCS2] Length = 648 Score = 223 bits (567), Expect = 6e-56, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 139/442 (31%), Gaps = 45/442 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD ++ L + + + G W P G + +R +Q Sbjct: 234 KAHLHMLEEAAKRDHRKLGREMNLF--HMQEEAPGQVFWHPNGWTVYTELQDYVRRKQRA 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-----MIYGPTHEEVMTDIF 118 E++ P + LW SG +D Y + M + + A P + +F Sbjct: 292 GDYREINTPQVVDRKLWEASGHWDKYHEHMFVVEVEEEHAKEKAINALKPMNCPCHVQVF 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F D + F + + Sbjct: 352 NQGLKSYRDLPLRLAEFGSCARYEPSGALHGIMRVRGFTQDDGHIFCTEEQIETEC-ARF 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 I+ LG + + + P S E D + Sbjct: 411 INFLADIYKDLGFEDFEIAFATRPEKRVGSDE-----------------SWDHVEGALEA 453 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + A Y D + L D+L + ++ G Sbjct: 454 AIKSTGRDFRLEPGDGAFYGPKLDFY---LTDALGRTWQCGTFQVDPNLPERLG------ 504 Query: 298 MSATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 AT+ G DG H + +G+ ++ H GK W +++ Sbjct: 505 --ATYIGQDGSKHRPFMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVATIV---- 558 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++ L VG D E+I + + P+ + +G++ V + V Sbjct: 559 --SDADDYAMEVVNALKAVGVRAEADLRNEKINFKVREHSVGKVPVILALGAREVEEKTV 616 Query: 417 EIKHRLTGIREDMSLEEVINYA 438 + SL E++ Sbjct: 617 TARRLGENKTSVTSLTEIVAEL 638 >gi|15639823|ref|NP_219273.1| threonyl-tRNA synthetase [Treponema pallidum subsp. pallidum str. Nichols] gi|189026061|ref|YP_001933833.1| threonyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14] gi|6094415|sp|O83809|SYT_TREPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238689347|sp|B2S475|SYT_TREPS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|3323150|gb|AAC65804.1| threonyl-tRNA synthetase (thrS) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018636|gb|ACD71254.1| threonyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14] Length = 592 Score = 223 bits (567), Expect = 6e-56, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 140/442 (31%), Gaps = 38/442 (8%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L + E R D L L + + + G W P G + +R + G Sbjct: 182 YLRMQDEAKRRDHRKLGPALGLF--HLDEENPGQVFWHPEGWTLYVAIQQYLRRVMHEDG 239 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW SG +D Y M L + ++ P + +IF+ +SY Sbjct: 240 YAEVHTPFVMPQSLWERSGHWDKYRANM-YLTEGEKRSFALKPMNCPGHVEIFKQKTRSY 298 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E GVMR R F+ DA+ F + + Sbjct: 299 RDLPLRLSEFGSCTRNEPSGSLHGVMRVRGFVQDDAHIFCTEAQIASEV----------- 347 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + A G + V T Q D + + Sbjct: 348 -----TRFCRLLARVYADFGFAQEQIRVKFSTRPEQRIGDDATWDRAERALAEACEAAGL 402 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D+L + ++ + ++A + G Sbjct: 403 SYEHAPGEGAFYGPKLEF---ALIDTLEREWQCGTIQVDY----QLPSC--ERLNAEYVG 453 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + H + IG++ ++ + G W V I + + Sbjct: 454 EDNQRHMPVILHRTVIGSLERFIGILIEHYGGAFPPWLAPVQAVVIPVAP------AFLE 507 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L V D E++ ++ A P +IVG + + +V ++ R T Sbjct: 508 YAQHVARELCARSLRVQADVSAERMNAKIRTAQTQKVPYLLIVGERELRAQQVAVRPR-T 566 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G + M L + + Sbjct: 567 GPQHSMGLSAFSTFLLAKLETR 588 >gi|315164831|gb|EFU08848.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1302] Length = 572 Score = 223 bits (567), Expect = 6e-56, Method: Composition-based stats. Identities = 106/235 (45%), Positives = 146/235 (62%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+++LR G I Q + GIYS+LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAAGIYSYLPLANRVLEKLKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P L A+LW ESGRY++YG + RL DRND+ I GPTHEE T++ R Sbjct: 61 FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEETFTELIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE RPR G++R REF+MKD YSF SY + Sbjct: 121 EINSYKRLPLNLYQIQTKYRDEKRPRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R GL+ + + G +GG S EF+ +++ GE + C D+ E Sbjct: 181 YSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTI-CYSTESDYAANLE 234 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 65/187 (34%), Positives = 107/187 (57%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ + D P+ V +GIE+GHIF GT+YS M AT +G++ V MG Y Sbjct: 382 EDLRFVQEGDPSPDGNGVLAFTKGIEIGHIFKLGTRYSDAMGATVLDENGREKSVIMGCY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E + D +GI WP +APF + ++ + D+ +++ A +++ G Sbjct: 442 GIGVSRLLSAIVEQNADERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGY 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V DD E+ G +FA ADL+G P+++ VG K V D VE+K + TG ++ EE+ + Sbjct: 502 EVLVDDRNERAGVKFADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEELEST 560 Query: 438 ASHRFSN 444 S + Sbjct: 561 LSILMNT 567 >gi|320534417|ref|ZP_08034899.1| threonyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337] gi|320133364|gb|EFW25830.1| threonyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337] Length = 678 Score = 223 bits (567), Expect = 6e-56, Method: Composition-based stats. Identities = 72/456 (15%), Positives = 140/456 (30%), Gaps = 45/456 (9%) Query: 5 KYFLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L + RD +L L + + G+ + P G + + + Sbjct: 241 KAYQTRLAEAAKRDHRRLGAELDLYS-FPEEIGPGLVVFHPKGAMLRHQIEQYVVDRHLD 299 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHE 111 G + P + L+ SG Y M + + + Sbjct: 300 YGFDFVHTPEISKGGLFHTSGHLPYYADTMFPPMLADEERDAEGNITKAGQEYYLKAMNC 359 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + +FRS +SYR LP F+++ +R E G+ R R F D++++ + Sbjct: 360 PMHNLVFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFTQDDSHTYCTPDQAG 419 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + +L I GL + + G +FI S D Sbjct: 420 EE-IRAQIDFFLSILKAFGLTDFHLELSTRDEEGAKKDKFI-----------GSDADWDA 467 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + D A Y + ++ D++ ++S + Sbjct: 468 ATQALQNACDASGLEVVPDPGGAAFYGPKV---SVQVKDAIGRTWQMSTIQYDFNQP--- 521 Query: 291 GTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 + ADG + S +G++ V+ + G W ++P ++ Sbjct: 522 -----ERFDLEYTAADGTHQRPIMIHSAKLGSVERFIGVLTEHYAGAFPTW---LSPVQV 573 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 LI + + + + ARL G V D ++ G + A P +I G + Sbjct: 574 RLIPVA---EAFDTYVDDVAARLRAKGVRVEVDHSDDRFGKKIRNASKDKIPFTLIAGGE 630 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + R + +EE + + Sbjct: 631 DAEAGAVSFRFRDGQQTNGVPVEEAVTHIVSVIDAR 666 >gi|329945633|ref|ZP_08293366.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386] gi|328528636|gb|EGF55601.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386] Length = 683 Score = 223 bits (567), Expect = 6e-56, Method: Composition-based stats. Identities = 71/456 (15%), Positives = 141/456 (30%), Gaps = 45/456 (9%) Query: 5 KYFLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L + RD +L L + + G+ + P G + + + Sbjct: 246 KAYQTRLAEAAKRDHRKLGAELDLYS-FPEEIGPGLVVFHPKGAMLRHQIEQYVVDRHQD 304 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHE 111 G + P + L+ SG Y M + + + Sbjct: 305 YGFDFVHTPEISKGGLFHTSGHLPYYADTMFPPMLADEERDGQGNITKAGQEYYLKAMNC 364 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IFRS +SYR LP F+++ +R E G+ R R F D++++ + Sbjct: 365 PMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFTQDDSHTYCTPEQAG 424 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + +L I GL + + G +FI S Sbjct: 425 EE-IRAQIDFFLSILKAFGLTDFYLELSTRDEDGAKKDKFI-----------GSDADWAA 472 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + D A Y + ++ D++ ++S + Sbjct: 473 ATRALQDACDASGLEVVPDPGGAAFYGPKV---SVQVKDAIGRTWQMSTIQYDFNQP--- 526 Query: 291 GTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 + ADG + S +G++ V+ + G W ++P ++ Sbjct: 527 -----ERFDLEYTAADGTHQRPIMIHSAKLGSVERFIGVLTEHYAGAFPTW---LSPVQV 578 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 LI + + D + + A+L G V D ++ G + A P +I G + Sbjct: 579 RLIPVA---EAFDDYVDDVAAQLRAQGVRVEVDHSDDRFGKKIRNASKDKIPFTLIAGGE 635 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + R ++++E + + Sbjct: 636 DAEAGAVSFRFRDGEQTNGVAVKEAVAHIVSVIDAR 671 >gi|32265941|ref|NP_859973.1| threonyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449] gi|73919797|sp|Q7VJ09|SYT_HELHP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|32261990|gb|AAP77039.1| threonyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449] Length = 604 Score = 223 bits (567), Expect = 6e-56, Method: Composition-based stats. Identities = 82/446 (18%), Positives = 165/446 (36%), Gaps = 43/446 (9%) Query: 2 RRS-KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 ++S K +L L+E RD ++ L T + G+ WLP G + N+ ++ + Sbjct: 192 KQSLKDYLFTLEEAKKRDHRKLGQEMGLFT-FDEEIGAGLPIWLPKGARLRHNIEHLLTQ 250 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 G + P + +D+W +SG Y +Y + M +++ P + +++ Sbjct: 251 ALKERGYEPVRGPEILKSDVWKKSGHYSNYKENM-YFTIIDEQEYGIKPMNCVGHIKVYQ 309 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 S +SYR LP FY+ + R E G++R REF DA+ F +T + N++ Sbjct: 310 SSPRSYRELPLRFYEYGIVHRHERSGVLHGLLRVREFTQDDAHIFCMTSQIKSE-VNQIL 368 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 I + G + P + E + + + Sbjct: 369 DFTKGIMNAFGFHYEM-ELSTRPQKSIGNDE-----------------VWENATAALKSA 410 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 ++ I E A Y D+ K+ D+L + I++ Sbjct: 411 LEENHISYQIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQIDMNLP--------ERF 459 Query: 299 SATFKGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 ++ V + +G+ A++ + G +P +AP ++ LI I Sbjct: 460 ELSYTDEHNVQVQPVMIHRAILGSFERFVAILT---EHFGGEFPLFIAPTQVILIPIG-- 514 Query: 358 DQVCRDACEKIYAR-LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + + + +++ G D E + + +A+ PL V++G+K V + Sbjct: 515 -EAQLEYARILRDKIITQSGAYAELMDKNESLSKKIRLAEKQRVPLIVVIGAKEVESKIL 573 Query: 417 EIKHRLTGIREDMSLEEVINYASHRF 442 I+ R + ++ E I + Sbjct: 574 AIRDRREKSQYELPEEAFIATLKTKI 599 >gi|255654136|ref|ZP_05399545.1| prolyl-tRNA synthetase [Clostridium difficile QCD-23m63] gi|296449825|ref|ZP_06891592.1| proline--tRNA ligase [Clostridium difficile NAP08] gi|296877889|ref|ZP_06901909.1| proline--tRNA ligase [Clostridium difficile NAP07] gi|296261312|gb|EFH08140.1| proline--tRNA ligase [Clostridium difficile NAP08] gi|296431086|gb|EFH16913.1| proline--tRNA ligase [Clostridium difficile NAP07] Length = 571 Score = 223 bits (567), Expect = 7e-56, Method: Composition-based stats. Identities = 115/258 (44%), Positives = 162/258 (62%), Gaps = 1/258 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK F+P L+E P DAEI SH+LM+R+GMI + + G+Y+ LP+G + + IIREE Sbjct: 1 MKMSKMFMPTLKEVPADAEITSHQLMVRSGMIKKMTSGVYNQLPMGLRVFKKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ E+ L ++LW ESGR+ + G+EM RL DR ++ GPTHEE TDI R Sbjct: 61 LNKKDCQEILCAALLPSELWKESGRWTAMGEEMFRLKDRTEREYCLGPTHEEAFTDIIRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ+K+RDE RPRFGVMR++ F MKDAYSFD+ +G SY MF + Sbjct: 121 EITSYKQLPLNLYQIQVKYRDERRPRFGVMRTKTFTMKDAYSFDVDDKGLDKSYQDMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ IF R GL++ P++A+SG IGG S EF+V ++ GE +V D+ E + Sbjct: 181 YVSIFDRCGLENSPVQADSGAIGGSTSTEFMVKSEVGEDEVVFCSGC-DYAANVERAESC 239 Query: 241 DIISLNSIVEQWTAPYAA 258 ++ S +++ Y Sbjct: 240 NVASEKEEMKELEEVYTP 257 Score = 153 bits (386), Expect = 7e-35, Method: Composition-based stats. Identities = 69/169 (40%), Positives = 94/169 (55%), Gaps = 3/169 (1%) Query: 255 PYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 D N + D ARG+EVGHIF GTKYS M+A F DGK + Sbjct: 375 FEGVVGDFRNVQEGDKCIVCGKPLEIARGVEVGHIFKLGTKYSESMNANFIDRDGKSKPI 434 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R AA+IE +D KGIIWP SVAP+ + ++ ++ EKIY L Sbjct: 435 VMGCYGIGVERTAAAIIEQHNDEKGIIWPLSVAPYHVVIVPANMKNEEQISIAEKIYNDL 494 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +G +V DD E+IG +F ++L+G P+++ VG K +++ KVE K R Sbjct: 495 QAMGVEVLLDDRDERIGVKFNDSELIGIPMRITVG-KNINEGKVEFKFR 542 >gi|50842977|ref|YP_056204.1| prolyl-tRNA synthetase [Propionibacterium acnes KPA171202] gi|289428734|ref|ZP_06430417.1| proline--tRNA ligase [Propionibacterium acnes J165] gi|295131048|ref|YP_003581711.1| proline--tRNA ligase [Propionibacterium acnes SK137] gi|81826419|sp|Q6A7L9|SYP_PROAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|50840579|gb|AAT83246.1| prolyl-tRNA synthetase [Propionibacterium acnes KPA171202] gi|289158132|gb|EFD06352.1| proline--tRNA ligase [Propionibacterium acnes J165] gi|291375052|gb|ADD98906.1| proline--tRNA ligase [Propionibacterium acnes SK137] gi|332675928|gb|AEE72744.1| proline--tRNA ligase [Propionibacterium acnes 266] Length = 585 Score = 223 bits (567), Expect = 7e-56, Method: Composition-based stats. Identities = 107/272 (39%), Positives = 156/272 (57%), Gaps = 6/272 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 4 RMSQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 64 ASIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y Sbjct: 124 YSSYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +RIF+RLG ++A SGP+GG S EF+ +A GE S + + D Sbjct: 184 IRIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGEDTFVRSSGGYAANVEAVRMAVPD 243 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + ++ P A D + + +SL Sbjct: 244 PLPID------GLPEAEVVDTPDARTIESLVR 269 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 4/188 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 DV + D P+ + ARGIE+GHIF G KY+ + +GK V MG Sbjct: 399 GVIDVAEIREGDPAPDGSGELHLARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMG 458 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R VAA+ E + D KG+ WP VAP+ + ++ ++ + +I + L++ Sbjct: 459 SYGLGVSRAVAAIAEGTCDEKGLCWPREVAPYDVQVLATGKGTEILDE-ATRIASELAEA 517 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD G +FA +++LG P V+VG + + D VE++ R TG +S+ E + Sbjct: 518 GLEVLLDDRKASPGVKFADSEILGMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAV 576 Query: 436 NYASHRFS 443 Sbjct: 577 CAVLKEVR 584 >gi|166365884|ref|YP_001658157.1| threonyl-tRNA synthetase [Microcystis aeruginosa NIES-843] gi|166088257|dbj|BAG02965.1| threonyl-tRNA synthetase [Microcystis aeruginosa NIES-843] Length = 599 Score = 223 bits (567), Expect = 7e-56, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 152/442 (34%), Gaps = 39/442 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD +L L G+ W P G + +++EQ + G + + Sbjct: 187 EEALKRDHRKLGKELGLFI-FSDSVGPGLPLWTPKGTLIRSLLEDFLKKEQLKRGYLPVV 245 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKA------MIYGPTHEEVMTDIFRSHIKS 124 P + DL+ SG + Y ++M + ++++ + P + I++S ++S Sbjct: 246 TPHIARVDLFKISGHWQKYKEDMFPMMADDEESAGKEIGFVLKPMNCPFHIQIYKSDLRS 305 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR LP + +R E G + D +TPE + + L + Sbjct: 306 YRELPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDKEFLSVVDLILTV 365 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F L LK+ R D + S + + + + Sbjct: 366 FKSLQLKNFKARLS--------------FRDPESDKYIGSDEAWEKAQSAIRKAVQTLGM 411 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y D D+L ++ ++ + Sbjct: 412 DYFEAPGEAAFYGPKLDFI---FQDALEREWQLGTVQVDYNLP--------ERFELEYVA 460 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + G++ + ++ + +P +AP +I L+ + D Sbjct: 461 EDGNRKRPVMIHRAPFGSLERLIGILI---EEYAGDFPLWLAPVQIRLLPV---SDTQLD 514 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ A++ +G D GE++G A+ P+ +VG+K + + + I+ R T Sbjct: 515 YAKEVTAKMQLLGIRAETDTSGERLGKMIRNAETAKIPVMAVVGAKEMESNSLSIRTRAT 574 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G +S+EEV+ N+ Sbjct: 575 GDLGVISVEEVVAKLESAIQNH 596 >gi|312143669|ref|YP_003995115.1| prolyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus'] gi|311904320|gb|ADQ14761.1| prolyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus'] Length = 568 Score = 223 bits (567), Expect = 7e-56, Method: Composition-based stats. Identities = 116/277 (41%), Positives = 167/277 (60%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S +LP L+E+P +A+I SHKLMLR G++ HS GIYS+LPLG + + + I R+ Sbjct: 1 MRMSNLYLPTLKEDPAEADITSHKLMLRAGLMRNHSAGIYSYLPLGYRVIKKIENITRKH 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + +GA E+ +P LQ+A +W +S R+D +G M+RL DR D+ GPTHEEV+TD+ + Sbjct: 61 MDASGAQEVLLPILQTAQIWKDSKRWDKFGPLMMRLRDRKDREYCLGPTHEEVVTDLIKD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY++LP YQIQ K RDE+RPRFGVMR REF+MKDAYS D+ EG SY M+ + Sbjct: 121 EIRSYKDLPLNLYQIQTKVRDEIRPRFGVMRGREFIMKDAYSLDIDYEGLDKSYQAMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y + F GL ++ + A++G +GG SHEF+VLAD+GE QV Sbjct: 181 YEKTFAECGLDAVAVEADTGAMGGKDSHEFMVLADSGEDQVAFCDSCGYAANVERAVANK 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV 277 +++ E + + + LP + + Sbjct: 241 ELLDFEEENEMEKIHTPDIKTIAELEAYLDLPAARMI 277 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 64/214 (29%), Positives = 110/214 (51%), Gaps = 1/214 (0%) Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + N ++N + +A V + + E K GIEVGHIF Sbjct: 354 AVTGANQKDYHFKNVNIERDFQVEEFADLRLVKDGESCLQCTEGKLNIKAGIEVGHIFKL 413 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 GTKYS M A + +G+ + MGSYGIG R+VAA IE ++D GIIWP ++AP++I Sbjct: 414 GTKYSENMGANYLDENGRTQPIVMGSYGIGITRLVAAAIEQNNDEYGIIWPKAIAPYQII 473 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 ++ + +D+ + E+IY L G +V DD E+ G +F ++L+G PL++ +GS+ Sbjct: 474 ILALG-NDEAVAEKSEEIYQELEAEGWEVLLDDRKERAGVKFNDSELIGIPLRLTIGSRS 532 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 + + ++E R + + ++ + + + Sbjct: 533 LENGEIEAMIRENNQKSKIKIDNLKEKTAELMAE 566 >gi|328907631|gb|EGG27395.1| proline--tRNA ligase [Propionibacterium sp. P08] Length = 585 Score = 223 bits (567), Expect = 7e-56, Method: Composition-based stats. Identities = 105/253 (41%), Positives = 151/253 (59%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + L + AI REE Sbjct: 4 RMSQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVLRRIEAICREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 64 AGIGAQEVSFPALLASDPYKETGRWAEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y Sbjct: 124 YSSYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDDAYQAQRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +RIF+RLG ++A SGP+GG S EF+ +A GE S D + + D Sbjct: 184 IRIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGEDTFVHSADGYAANVEAVRIAAPD 243 Query: 242 IISLNSIVEQWTA 254 + ++ + E Sbjct: 244 PLPIDGLPEAEVV 256 Score = 129 bits (325), Expect = 7e-28, Method: Composition-based stats. Identities = 60/170 (35%), Positives = 92/170 (54%), Gaps = 4/170 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 DV + D P+ + +RGIE+GHIF G KY+ + +GK V MG Sbjct: 399 GVIDVAEIREGDPAPDGSGELHLSRGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMG 458 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R VAA+ E + D KG++WP VAPF + ++ + + +I + L++V Sbjct: 459 SYGLGVSRAVAAIAEGTCDEKGLVWPREVAPFDVQVLATGKGTDILDE-ATRIASELAEV 517 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 G +V DD G +FA +++LG P V+VG + + D VE++ R TG Sbjct: 518 GLEVLLDDRKASPGVKFADSEILGVPTSVVVG-RGLKDGLVEVRDRATGE 566 >gi|254517592|ref|ZP_05129648.1| threonyl-tRNA synthetase [Clostridium sp. 7_2_43FAA] gi|226911341|gb|EEH96542.1| threonyl-tRNA synthetase [Clostridium sp. 7_2_43FAA] Length = 645 Score = 223 bits (567), Expect = 7e-56, Method: Composition-based stats. Identities = 76/440 (17%), Positives = 151/440 (34%), Gaps = 35/440 (7%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD +L + T + +G+ +P G K + + + +E+ + G + Sbjct: 235 LEEAKKRDHNKLGRELKIFTT-DEKVGQGLPLIMPKGAKIVQLLQRWVEDEEEKRGYVFT 293 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 P++ DL+ SG +D Y M D++ + M P I+ + SYR Sbjct: 294 KTPSMSKNDLFKVSGHWDHYKDGMFVLGDEDKDPEVMALRPMTCPFQYTIYNAEQHSYRE 353 Query: 128 LPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP + + +R+E G++R R+F + D + P+ + + I Sbjct: 354 LPIRYAETSTLYRNEASGEMHGLIRVRQFTLSDGHIVCR-PDQIEEEFKGCVELINHIM- 411 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 + I GD+S F + + + + D + Sbjct: 412 -----------STLGIDGDISFRFSKWDPNNTDKYINNPEAWEETQVLMKAILDHLGIDY 460 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y D+ + + + + I+ + T+ D Sbjct: 461 VEAEGEAAFYGPKLDIQFKNVH---GKEDTIITIQIDFAL--------AERFDMTYIDKD 509 Query: 307 GKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 G + IG A++ + +P +AP + ++ I D Sbjct: 510 GNKKRPYIIHRSSIGCYERTLAMLI---EKYAGAFPTWLAPTQAIVLPISDK---YNDYA 563 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 E I G + D E+IG + A L P ++VG K ++++ ++ R G Sbjct: 564 ESIVKDFKDSGIRITADYRSEKIGYKIREARLERIPYILVVGEKEAANNEASVRSRKNGE 623 Query: 426 REDMSLEEVINYASHRFSNN 445 + + E+ N +N Sbjct: 624 EGALPVSELKNRLILEIANK 643 >gi|116670864|ref|YP_831797.1| threonyl-tRNA synthetase [Arthrobacter sp. FB24] gi|166223319|sp|A0JXC7|SYT_ARTS2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|116610973|gb|ABK03697.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Arthrobacter sp. FB24] Length = 669 Score = 223 bits (567), Expect = 7e-56, Method: Composition-based stats. Identities = 67/450 (14%), Positives = 125/450 (27%), Gaps = 47/450 (10%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 I + RD +L L + + G+ + P G + R+ G Sbjct: 252 RIAEAERRDHRKLGAELDLFS-FPDELGSGLPVFHPKGGIIRKAMEDYSRQRHVDAGYDF 310 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTD 116 + P + L+ SG D Y + M + + P + + Sbjct: 311 VYTPHITKGHLYEVSGHLDWYKEGMFPAMHIDAELNEDGTVRKPGQDYYLKPMNCPMHNL 370 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IFRS +SYR LP ++ +R E G+ R R DA+ + + Sbjct: 371 IFRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTREQMKDEL-T 429 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 L + GL + + E + D + Sbjct: 430 TTLNFVLGLLKDYGLDDFYLELST----------------KNEDKFVGDDATWDEATRTL 473 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 + A Y + + D+L ++S ++ F ++ Sbjct: 474 AEVAEASGLELIPDPGGAAFYGPKI---SVQAKDALGRTWQMSTIQLD----FNLPERFE 526 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 L A + V + G++ V+ + G W V I + Sbjct: 527 LEFQAA---DGTRQRPVMIHRALFGSVERFMGVLTEHYAGAFPAWLAPVQVVGIPVA--- 580 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + D + +L VG D ++ + A P +I G + Sbjct: 581 ---EAFNDYMFDVVDQLKAVGIRAEVDISSDRFPKKIRTASKDKIPFVLIAGGEDAEAGA 637 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + R + + E + N Sbjct: 638 VSFRFRDGSQDNGVPVAEAVQRIVEAVRNR 667 >gi|271963639|ref|YP_003337835.1| proline--tRNA ligase [Streptosporangium roseum DSM 43021] gi|270506814|gb|ACZ85092.1| Proline--tRNA ligase [Streptosporangium roseum DSM 43021] Length = 580 Score = 222 bits (566), Expect = 7e-56, Method: Composition-based stats. Identities = 104/244 (42%), Positives = 144/244 (59%), Gaps = 1/244 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+++P DAE+ SHKL++R G + + + GIYSWLPLG+ L+NV I+REE Sbjct: 4 RMSSLFLRTLRDDPADAEVPSHKLLVRAGYVRRVAPGIYSWLPLGKMVLENVTRIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 NR G E+ P L + + +GR+ YG + RL DR + GPTHEE+ TD+ + Sbjct: 64 NRMGGQEVLFPALLPREYYEATGRWTEYGDTLFRLQDRKGADYLLGPTHEEMFTDMVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSFDL +G K SY + +Y Sbjct: 124 YSSYKDYPVTLYQIQTKYRDEARPRAGILRGREFVMKDSYSFDLDDDGLKRSYEQHRETY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +R F RLG+ A SG +GG S EF+ A TGE + +E Sbjct: 184 IRTFDRLGISYKICFATSGAMGGSASEEFLAPAATGEDTFVACHQC-GYAANAEAVTTPA 242 Query: 242 IISL 245 ++ Sbjct: 243 PAAI 246 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 59/184 (32%), Positives = 90/184 (48%), Gaps = 6/184 (3%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D+ P RGIE+GHIF G KY+ G DGK V MG Sbjct: 394 GTIEAAEVRAGDACPVCGSGLSIDRGIEIGHIFQLGRKYADAAKLDALGPDGKPIRVTMG 453 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R VA + E HD G++WP VAP + + +A ++ L Sbjct: 454 SYGVGVSRAVAVLAEQRHDELGLVWPREVAPVDVH--VVGTGKDGQIEAANRLAEDLQAR 511 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G V DD G G +F A+LLG P +I+G + ++ E++ R+TG++E++ ++E Sbjct: 512 GLRVLVDDRAGVSPGVKFKDAELLGMPTILIIG-RGLAQGVAELRDRVTGVKEEIPIDEA 570 Query: 435 INYA 438 + Sbjct: 571 ADRV 574 >gi|296139628|ref|YP_003646871.1| threonyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162] gi|296027762|gb|ADG78532.1| threonyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162] Length = 677 Score = 222 bits (566), Expect = 7e-56, Method: Composition-based stats. Identities = 61/455 (13%), Positives = 127/455 (27%), Gaps = 50/455 (10%) Query: 7 FLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L + RD +L L + G+ + P G + R+ G Sbjct: 243 YLELLAEAEKRDHRRLGAELDLFS-FPDALGSGLPVFHPKGGIIRKELEEYSRQRHVDAG 301 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEV 113 ++ P L + L+ SG D Y M + + P + + Sbjct: 302 YEFVNTPHLTKSALYEVSGHLDWYKDGMFPAMHLDAEYDDEGNVTKPGQDYYVKPMNCPM 361 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IF + +SYR LP ++ +R E G+ R R DA+ + + Sbjct: 362 HNLIFDARGRSYRELPLRLFEFGSVYRYEKSGVIHGLTRVRGMTQDDAHIYCTKEQMHGE 421 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 L + GL + + + D + Sbjct: 422 L-TTTLKFVLSLLKDYGLDDFYLELST----------------KNPEKYVGDDDVWEEAT 464 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y + + D+L ++S ++ F Sbjct: 465 KTLQQVAEASGLDLVPDPGGAAFYGPKI---SVQAKDALGRTWQMSTIQLD----FNLPE 517 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 ++ + DG + G++ V+ + G W I + Sbjct: 518 RF----ELEYTAPDGTKQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPEQVVGIPV 573 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + D E + +L G D +++ + P ++ G + Sbjct: 574 A------EQFGDHLETVIRKLRAEGIRAHVDHSDDRMQKKIRNHTTQKVPFMLLAGERDR 627 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 V + R ++ +++ + R Sbjct: 628 EAGAVSFRFRDGTQVNEVPVDDAVQRIVEWVRARR 662 >gi|269219602|ref|ZP_06163456.1| proline--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332] gi|269210844|gb|EEZ77184.1| proline--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332] Length = 594 Score = 222 bits (566), Expect = 7e-56, Method: Composition-based stats. Identities = 100/235 (42%), Positives = 138/235 (58%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S F+ L+E+P DAE+ASH+L++R G I + + GIY+WLPLG + L + I+REE Sbjct: 1 MSSLFVRTLREDPADAEVASHRLLVRAGYIRRAAPGIYTWLPLGLRVLRKIERIVREEME 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G+ E+ P L + + SGR+ YG + +L DR + + PTHEE+ T + + Sbjct: 61 AAGSQEVHFPALLPREPYEASGRWSDYGPTLFKLKDRKESDYLLAPTHEELFTLLVKDMY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP + YQIQ K+RDE RPR GV+RSREF+MKDAYSFD+ G SY M +Y Sbjct: 121 SSYKDLPLSLYQIQTKYRDEARPRAGVIRSREFVMKDAYSFDVDEAGLDASYAAMRSAYQ 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 RIF RLGL + A SG +GG S EF+ + GE S + T Sbjct: 181 RIFARLGLPFVICSAVSGAMGGSRSEEFLFPCEIGEDAFVRSAGGYAANTEAVTT 235 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 65/188 (34%), Positives = 96/188 (51%), Gaps = 6/188 (3%) Query: 260 SDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 + + D P+ A+GIEVGHIF G KY+ + + +GK V MGSY Sbjct: 404 IEAAEVRAGDEAPDGSGPLEIAKGIEVGHIFQLGRKYAKALGLSVLDENGKSRTVTMGSY 463 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG RV+AA+ E +HDG+G++WP SVAP + ++ D A E+I A L G Sbjct: 464 GIGITRVLAALAEENHDGRGLMWPASVAPAHVHIVAAG-KDDALYAAAEEIAAGLEADGV 522 Query: 378 DVFWDD-MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD G +FA +LLG P V+VG + +++ VEI+ R G + +E+ Sbjct: 523 EVLLDDRRKVSAGVKFADYELLGVPFGVVVG-RGLAEGLVEIRDRA-GETIEAPVEQARE 580 Query: 437 YASHRFSN 444 + Sbjct: 581 RIGELVRS 588 >gi|317969695|ref|ZP_07971085.1| threonyl-tRNA synthetase [Synechococcus sp. CB0205] Length = 590 Score = 222 bits (566), Expect = 8e-56, Method: Composition-based stats. Identities = 72/439 (16%), Positives = 134/439 (30%), Gaps = 36/439 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+Y + RD L L + + + G+ W P G + + + RE Sbjct: 173 LSEYKRRQEEAKRRDHRRIGTDLDLFS-IEDEAGAGLVFWHPRGARMRLLIENLWRELHF 231 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P + LW SG D Y + M +++ P + + S + Sbjct: 232 NAGYELLYTPHVADISLWKTSGHLDFYSESMFGPMQVDEREYQLKPMNCPFHVLTYASTL 291 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR LP + ++ +R E G+MR R F DA+ F L + S + Sbjct: 292 RSYRELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDE-ILAILDLT 350 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +I ++ + + P D + Sbjct: 351 EQILSTFDFRNYEINLSTRPEKS-----------------IGEDAVWDLATQGLIEALER 393 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ K+ D++ + S ++ F ++ L A Sbjct: 394 KGWAYKIDEGGGAFYGPKIDL---KIEDAIGRMWQCSTVQLD----FNLPERFDLEYVAA 446 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + + + R + E+ Sbjct: 447 --DGSRQRPIMIHRAIFGSLERFFGIMTENYAGDFPFWLAPEQIRLLPVT-------DEV 497 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E + A L G D G+++G + + P+ ++G+K + ++ R Sbjct: 498 TGYAESVAAALKAAGVRASVDHSGDRLGKLIRNGEQMKIPVLGVIGAKEAEGGTISLRSR 557 Query: 422 LTGIREDMSLEEVINYASH 440 G + LE V+ A Sbjct: 558 REGDLGSIELETVVAAAKE 576 >gi|161344762|ref|NP_441328.2| prolyl-tRNA synthetase [Synechocystis sp. PCC 6803] gi|114152887|sp|P73942|SYP_SYNY3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 603 Score = 222 bits (566), Expect = 8e-56, Method: Composition-based stats. Identities = 114/240 (47%), Positives = 154/240 (64%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+++P DAEI SHKL++R G I + G+Y++LPL + L+ V I++EE Sbjct: 1 MRLSQMLFVTLRDDPADAEIPSHKLLVRAGFIRRLGSGLYAYLPLIWRVLEKVKRIVQEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 NRTGA E +P LQ ++LW SGR+D+Y + M L DR ++ + GPTHEEV+T I Sbjct: 61 MNRTGAQECLLPQLQPSELWKMSGRWDTYTESEGIMFALRDRLERELGLGPTHEEVITAI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF K +Y M Sbjct: 121 AKEMIRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHSDEASLKATYGAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y IF R GL P+ A+SG IGG S EF+VLAD GE ++ ++D + + E Sbjct: 181 DQAYRNIFSRCGLDFRPVDADSGAIGGSGSQEFMVLADAGEDEILYTEDGL-YSANVEKA 239 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 59/175 (33%), Positives = 95/175 (54%), Gaps = 1/175 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P + +ARGIEVGHIF GTKYS M ATF G++ + MG YGIG R+ A +E Sbjct: 427 PTGELKTARGIEVGHIFQLGTKYSQAMGATFTNEQGEEKPLVMGCYGIGVSRLAQAAVEQ 486 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 S+D GIIWP ++AP+++ ++ D+ E+IY DV DD E+ G + Sbjct: 487 SYDKDGIIWPTAIAPYEVVIVVPNVGDEEQMQVAEQIYTEFQAAEVDVLLDDRNERAGVK 546 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 F ++L+G P +V+ G K + ++E+ R +++++ V+ + + Sbjct: 547 FKDSELIGIPYRVVTG-KSLKQGQLEVVKRADKSVQNLAIAAVVPTLTAWIKAEK 600 >gi|1653092|dbj|BAA18008.1| proline-tRNA ligase [Synechocystis sp. PCC 6803] Length = 617 Score = 222 bits (566), Expect = 8e-56, Method: Composition-based stats. Identities = 114/240 (47%), Positives = 154/240 (64%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L+++P DAEI SHKL++R G I + G+Y++LPL + L+ V I++EE Sbjct: 15 MRLSQMLFVTLRDDPADAEIPSHKLLVRAGFIRRLGSGLYAYLPLIWRVLEKVKRIVQEE 74 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 NRTGA E +P LQ ++LW SGR+D+Y + M L DR ++ + GPTHEEV+T I Sbjct: 75 MNRTGAQECLLPQLQPSELWKMSGRWDTYTESEGIMFALRDRLERELGLGPTHEEVITAI 134 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + I+SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF K +Y M Sbjct: 135 AKEMIRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHSDEASLKATYGAM 194 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y IF R GL P+ A+SG IGG S EF+VLAD GE ++ ++D + + E Sbjct: 195 DQAYRNIFSRCGLDFRPVDADSGAIGGSGSQEFMVLADAGEDEILYTEDGL-YSANVEKA 253 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 59/175 (33%), Positives = 95/175 (54%), Gaps = 1/175 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P + +ARGIEVGHIF GTKYS M ATF G++ + MG YGIG R+ A +E Sbjct: 441 PTGELKTARGIEVGHIFQLGTKYSQAMGATFTNEQGEEKPLVMGCYGIGVSRLAQAAVEQ 500 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 S+D GIIWP ++AP+++ ++ D+ E+IY DV DD E+ G + Sbjct: 501 SYDKDGIIWPTAIAPYEVVIVVPNVGDEEQMQVAEQIYTEFQAAEVDVLLDDRNERAGVK 560 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 F ++L+G P +V+ G K + ++E+ R +++++ V+ + + Sbjct: 561 FKDSELIGIPYRVVTG-KSLKQGQLEVVKRADKSVQNLAIAAVVPTLTAWIKAEK 614 >gi|296117670|ref|ZP_06836254.1| proline--tRNA ligase [Corynebacterium ammoniagenes DSM 20306] gi|295969401|gb|EFG82642.1| proline--tRNA ligase [Corynebacterium ammoniagenes DSM 20306] Length = 585 Score = 222 bits (566), Expect = 8e-56, Method: Composition-based stats. Identities = 105/283 (37%), Positives = 155/283 (54%), Gaps = 5/283 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+E+P +AE+ SHKL++R G + + + GIYSWLPLG + L + ++REE Sbjct: 4 RLSELFLRTLREDPAEAEVPSHKLLVRAGYLRRAAPGIYSWLPLGLRTLRKIEDVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + + R+ YG + RL DR M+ GPTHEE+ + Sbjct: 64 NAIGGQELLFPALLPREPYELTDRWTEYGDNLFRLKDRKGADMLLGPTHEEMFAQTVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSFD++ EG SY + +Y Sbjct: 124 YSSYKDFPVTLYQIQTKYRDEERPRAGILRGREFIMKDSYSFDMSDEGLDKSYARHRKAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +IF RLG++ +A SG +GG S EF+ +++ GE F D+ E Sbjct: 184 QKIFDRLGIEYAICQATSGAMGGSASEEFLAVSEVGE-DTFVRATDGDYAANVEAVVTPV 242 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 ++ P A D + + D+L E R I+ Sbjct: 243 PAEIDYS----NLPEAKEYDTPDSETIDTLVEWARSEGITIDD 281 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 58/188 (30%), Positives = 88/188 (46%), Gaps = 6/188 (3%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 + D PE + RGIE+GHIF G KY+ +GK MG Sbjct: 398 EFVEASEVHEGDPAPEGQGTLTLKRGIELGHIFQLGRKYTQAFDVQILDENGKRAIPTMG 457 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R++A + E HD KG+ WP VAP+++ + D+ A ++ L K Sbjct: 458 SYGIGVSRMMAVLAEQRHDEKGLNWPLDVAPYQVHVAVAN-KDEDATKAGNELVEALDKA 516 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD G +F A+LLG P I+G + D +E++ R G ++ E + Sbjct: 517 GVEVLFDDRPKVSPGVKFKDAELLGMPYCAILG-RSFKDGIIELRIRG-GETLEVPAESI 574 Query: 435 INYASHRF 442 ++ R Sbjct: 575 VDELLQRL 582 >gi|270307741|ref|YP_003329799.1| prolyl-tRNA synthetase [Dehalococcoides sp. VS] gi|270153633|gb|ACZ61471.1| prolyl-tRNA synthetase [Dehalococcoides sp. VS] Length = 569 Score = 222 bits (566), Expect = 8e-56, Method: Composition-based stats. Identities = 107/252 (42%), Positives = 162/252 (64%), Gaps = 1/252 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F +E P DAE SH+L+LR+GMI Q + G+YS++PL +++ + IIR+E Sbjct: 1 MRYSRLFGKTQREIPSDAETISHQLLLRSGMIAQLTAGVYSFMPLAWRSIQKIENIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++G E+++P LQ ++W +SGR +G+ + L DR D+ ++ GPTHEEV+TD+ Sbjct: 61 MNKSGCQELAMPVLQPVEIWQQSGREAPFGQTLFHLKDRKDRNLVLGPTHEEVITDLASR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I+SYR+LP YQIQ KFRDE RPR G++R REF+MKD YSFD +PEG SY M + Sbjct: 121 YIQSYRDLPQRLYQIQTKFRDEPRPRGGLIRVREFIMKDMYSFDASPEGLDESYQTMKQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y ++ R GL+S+ + A+SG IGG SHEF+++A++GE + ++ +E F Sbjct: 181 YESVYRRCGLESMVIDADSGAIGGKASHEFMIVAESGEDSIIYCPKC-NYAANAEKAVFK 239 Query: 241 DIISLNSIVEQW 252 ++ Sbjct: 240 KKTLPKEPLKDL 251 Score = 156 bits (393), Expect = 1e-35, Method: Composition-based stats. Identities = 65/194 (33%), Positives = 96/194 (49%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A A + E + S RG+EVGHIF GT S A F A+G H Sbjct: 372 DFKADKMADIALAAEGAACPFCDGTFASKRGVEVGHIFKLGTFLSERFGANFTDAEGISH 431 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + MG YG+G R++AA IE +HD KGIIWP +AP+++ + + A EK+YA Sbjct: 432 PIIMGCYGMGVGRLLAAAIEQNHDEKGIIWPMPIAPYQVYICGLFLDKPAVSQAAEKMYA 491 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L G +V +DD G +F ADLLG PL++ + + + VE+K R E + Sbjct: 492 ELEAQGVEVLFDDRELTAGVKFNDADLLGIPLRLTISPRNLDKGGVELKLRRNKEAELVP 551 Query: 431 LEEVINYASHRFSN 444 L+ ++ + Sbjct: 552 LDNIVEKVIATIKS 565 >gi|57234857|ref|YP_181114.1| prolyl-tRNA synthetase [Dehalococcoides ethenogenes 195] gi|114152187|sp|Q3Z9I5|SYP_DEHE1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|57225305|gb|AAW40362.1| prolyl-tRNA synthetase [Dehalococcoides ethenogenes 195] Length = 569 Score = 222 bits (566), Expect = 8e-56, Method: Composition-based stats. Identities = 107/252 (42%), Positives = 161/252 (63%), Gaps = 1/252 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F +E P DAE SH+L+LR+GMI Q + G+YS++PL +++ + IIR+E Sbjct: 1 MRYSRLFGKTQREIPSDAETISHQLLLRSGMIAQLTAGVYSFMPLAWRSIQKIENIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N++G E+++P LQ ++W +SGR +G+ + L DR D+ ++ GPTHEEV+TD+ Sbjct: 61 MNKSGCQELAMPVLQPVEIWQQSGREAPFGQTLFHLKDRKDRNLVLGPTHEEVITDLASR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I+SYR+LP YQIQ KFRDE RPR G++R REF+MKD YSFD +PEG SY M + Sbjct: 121 YIQSYRDLPQRLYQIQTKFRDEPRPRGGLIRVREFIMKDMYSFDASPEGLDESYQTMKQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y ++ R GL+S+ + A+SG IGG SHEF+++A++GE + ++ +E F Sbjct: 181 YENVYRRCGLESMVIDADSGAIGGKASHEFMIVAESGEDSIIYCPKC-NYAANAEKAVFK 239 Query: 241 DIISLNSIVEQW 252 + Sbjct: 240 KKTLPKEPPKDL 251 Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats. Identities = 67/194 (34%), Positives = 96/194 (49%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A A + E + S RG+EVGHIF GT S A F A+G H Sbjct: 372 DFKADKMADIALAAEGAACPFCDGTFASKRGVEVGHIFKLGTFLSERFGANFTDAEGISH 431 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + MG YG+G R++AA IE +HD KGIIWP +AP++I + + + A EKIY Sbjct: 432 PIIMGCYGMGVGRLLAAAIEQNHDEKGIIWPMPIAPYQIYICGLFLDNPAVSQAAEKIYT 491 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L G +V +DD G +F ADLLG PL++ + + + VE+K R E + Sbjct: 492 ELEAQGVEVLFDDRELTAGVKFNDADLLGIPLRLTISPRNLDKGGVELKLRRNKESELVP 551 Query: 431 LEEVINYASHRFSN 444 LE ++ + Sbjct: 552 LESIMERVITCIKS 565 >gi|320531911|ref|ZP_08032821.1| prolyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337] gi|320135880|gb|EFW27918.1| prolyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337] Length = 610 Score = 222 bits (566), Expect = 8e-56, Method: Composition-based stats. Identities = 98/284 (34%), Positives = 151/284 (53%), Gaps = 2/284 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S F+ L+E+P DAE+ASH+L++R + + + G+Y+WLPLG + L + I+R+E Sbjct: 4 RLSTSFIRTLREDPADAEVASHRLLVRACYVRRAAPGVYTWLPLGLRTLRKIEDIVRQEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ P L A+ + +GR+D YG + +L DR D + PTHEE+ T + Sbjct: 64 DAMGGQEVHFPALLPAEPYQATGRWDDYGPTLFKLRDRKDGDYLLAPTHEEMFTLAVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G +Y +Y Sbjct: 124 YSSYKDLPAIVYQIQTKYRDEARPRAGIIRGREFVMKDSYSFDIDDAGLAAAYQAHRDTY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF RLGL + + A +G +GG S EF+ + GE S + T + Sbjct: 184 ERIFTRLGLDYVIVNAMAGAMGGSHSEEFLYPCEIGEDTFVRSSSGYAANAEAVITVVPE 243 Query: 242 IISLNSIVEQWTA--PYAATSDVHNEKLFDSLPENKRVSARGIE 283 + + + P T D E ++ P + + + Sbjct: 244 TVDASGVGPARVVDTPDTPTIDSLVELCNEAYPRSDGRAWTAAD 287 Score = 140 bits (352), Expect = 6e-31, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 94/189 (49%), Gaps = 4/189 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ ARGIE+GHIF G KYS + + +GK V MG Sbjct: 415 GTIEAAEVREGDPAPDGSGPLHLARGIEIGHIFELGRKYSQALGLSVLDENGKARVVTMG 474 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG RV+AA+ E++HD KG+ WP +AP+ + ++ DQ D +I + L Sbjct: 475 SYGIGVSRVMAALAEANHDDKGLTWPVQIAPYHVQVLATG-KDQAVFDVAGQIASSLDAD 533 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD G +FA A+LLG P V+VG + VEI+ R TG + + Sbjct: 534 GVEVLYDDRRKVSAGVKFADAELLGLPYTVVVGRDLAREGTVEIRDRRTGEHRSVPADAA 593 Query: 435 INYASHRFS 443 S Sbjct: 594 ATELSATVR 602 >gi|86749289|ref|YP_485785.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris HaA2] gi|86572317|gb|ABD06874.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodopseudomonas palustris HaA2] Length = 661 Score = 222 bits (566), Expect = 8e-56, Method: Composition-based stats. Identities = 73/443 (16%), Positives = 136/443 (30%), Gaps = 38/443 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + G+ W G ++ +R Sbjct: 236 YLKQIEEAEKRDHRKLGRELDLF--HFQEEGPGVVFWHAKGWSIFQSLVGYMRRRL-AGD 292 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-----KAMIYGPTHEEVMTDIFRS 120 E++ P + LW SG ++ Y + M + + P + IF+ Sbjct: 293 YDEVNAPQILDKVLWETSGHWEWYRENMFAAQSAGEDAEDKRWFALKPMNCPGHVQIFKH 352 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + + R E G+MR R F DA+ F + + + Sbjct: 353 GLKSYRDLPLRMAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEAQLADECMKINDL 412 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + ++ + P + E A+ + + N Sbjct: 413 IMSTYSDFGFDGELTVKLSTRPDKRVGTDEMWDHAER-----VMATVLSEIKAQGSNRIK 467 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 +I A Y + L D++ + + ++ FG Sbjct: 468 TEI------NPGEGAFYGPKFEY---VLRDAIGRDWQCGTTQVDFNLPERFG-------- 510 Query: 300 ATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + ADG V + G+M ++ G +W V ++ Sbjct: 511 AFYIDADGAKKAPVMVHRAICGSMERFIGILIEHFAGNFPLWLAPVQLVVATIT------ 564 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + +++ A + G V D E+I + L P ++VG K V + Sbjct: 565 SEGDEYAKQVVAAARRAGLRVDIDLRNEKINLKVREHSLAKVPALLVVGKKEAETHSVSV 624 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + + M E I Sbjct: 625 RRLGSDGQTVMPTAEAIAALVDE 647 >gi|242242546|ref|ZP_04796991.1| prolyl-tRNA synthetase [Staphylococcus epidermidis W23144] gi|242233973|gb|EES36285.1| prolyl-tRNA synthetase [Staphylococcus epidermidis W23144] Length = 567 Score = 222 bits (566), Expect = 8e-56, Method: Composition-based stats. Identities = 112/237 (47%), Positives = 160/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P ++E P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N++ IIREE Sbjct: 1 MKQSKVFIPTMREVPAEAEALSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNISKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T + R Sbjct: 61 MESIDAVEILMPALQQAELWEESGRWSAYGPELMRLKDRNGREFALGPTHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ K+RDE RPRFG++R REFLMKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPLTLFQIQSKYRDEKRPRFGLLRGREFLMKDAYSFHSDEASLDATYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R+G+ + P+ A+SG IGG +HEF+ L++ GE + + D+ E Sbjct: 181 YSRIFKRVGINARPVVADSGAIGGSHTHEFMALSEIGEDTIVY-SNESDYAANIEKA 236 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 66/166 (39%), Positives = 99/166 (59%), Gaps = 2/166 (1%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E ++D GIIW Sbjct: 404 GIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGVSRTLSAIVEQNNDENGIIW 463 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P SV PF I LI I + R +++Y +L D+ +DD E+ G +F +DL+G Sbjct: 464 PKSVTPFDIHLITINPKKEDQRTLGDQLYQKLMDS-YDILYDDRKERAGVKFNDSDLIGL 522 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 P++V+VG + + VE+K R G+ E++ ++E+ Y F N + Sbjct: 523 PVRVVVGKR-AEEGIVEVKQRFNGLSEEVQIDELETYLQDLFKNIK 567 >gi|227826680|ref|YP_002828459.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.14.25] gi|259516736|sp|C3MUC7|SYT_SULIM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|227458475|gb|ACP37161.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.14.25] Length = 545 Score = 222 bits (566), Expect = 8e-56, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 153/443 (34%), Gaps = 39/443 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + D + KL L + + G+ + P GQ + + A +RE + G Sbjct: 128 YLTWLEKAEETDHRLIGEKLDLFSFH-EEAGSGLVLFHPKGQTIRNELIAFMREINDSMG 186 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ + D+W SG Y Y +++ + + P + I++S ++Y Sbjct: 187 YQEVYTSHVFKTDIWKISGHYTLYRDKLI-VFNMEGDEYGVKPMNCPAHILIYKSKPRTY 245 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F + +R E + +G++R R F+ D + F + + + + Sbjct: 246 RDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIFLREDQLREEIKMLISKTVEVW 305 Query: 185 FHR-LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I + P S E + + + + Sbjct: 306 HKFGFKDDDIKPYLSTRPDESIGSDE-----------------LWEKATNALISALQESG 348 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E+ A Y D ++ DSL ++S ++ F ++ + Sbjct: 349 LKFGIKEKEGAFYGPKIDF---EIRDSLGRWWQLSTIQVD----FNLPERF----KLEYI 397 Query: 304 GADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG K V + G++ A++ GK W ++ ++ ++ I Sbjct: 398 DKDGIKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTW---LSSVQVRVLPIT---DEVN 451 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + EK+ + K D GE + + A G P +IVG K S+ V ++ R Sbjct: 452 EYAEKVLNDMRKRRIRAEIDYAGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARG 511 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 ++ E+ + Sbjct: 512 NIEVRNVKFEKFLELLITEIGQR 534 >gi|255327209|ref|ZP_05368284.1| threonine--tRNA ligase [Rothia mucilaginosa ATCC 25296] gi|255295827|gb|EET75169.1| threonine--tRNA ligase [Rothia mucilaginosa ATCC 25296] Length = 677 Score = 222 bits (566), Expect = 8e-56, Method: Composition-based stats. Identities = 70/439 (15%), Positives = 134/439 (30%), Gaps = 32/439 (7%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 I + RD +L L + G+ P G + +R + G Sbjct: 256 RIAEAERRDHRRLGRELDLFS-FPKNIGPGLPVIHPKGGVIKREMEDYVRTRHIQEGFQY 314 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 +S P + DL+ SG Y M + ++ + + +I+RS +SYR L Sbjct: 315 VSTPHISKEDLFYTSGHLPYYADGMFPPMELDNGHYRLKAMNCPMHNEIYRSRGRSYREL 374 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P F++ +RDE G+ R R D++S+ + + L + Sbjct: 375 PLRFFEFGTVYRDEKSGVLQGLTRVRMITQDDSHSYVTKEQAPDE-VRHLLKFMLSLLED 433 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 G+ + + GD +FI + + + Sbjct: 434 FGMTDFYLELSTRDTEGDKKDKFIGTDEQ-----------WEAATAVLEQVAKETGLELV 482 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 A Y + + D++ ++S + FG ++ ADG Sbjct: 483 PDPGGAAFYGPKI---SVQAKDAIGRTWQMSTVQYDFNQPSRFG--------LEYQAADG 531 Query: 308 KDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + S G++ V+ + G W V + + + D Sbjct: 532 TVQEPVMIHSAKFGSIERFLGVLTEHYAGAFPAWLAPVQVIGVPVA------EAFNDYMT 585 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 +I +L G V D ++ + A P +I G + V + R Sbjct: 586 EIADKLRAHGVRVEVDYGSDRFTKKIRTASTEKVPFILIAGGEDAEHGAVSFRFRGNKQE 645 Query: 427 EDMSLEEVINYASHRFSNN 445 + ++E + N Sbjct: 646 NGVPVDEAVARIVEHIRNR 664 >gi|156740370|ref|YP_001430499.1| threonyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941] gi|156231698|gb|ABU56481.1| threonyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941] Length = 595 Score = 222 bits (566), Expect = 8e-56, Method: Composition-based stats. Identities = 75/444 (16%), Positives = 134/444 (30%), Gaps = 38/444 (8%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E R D +L L G+ + P G+ + + +RE Q R G Sbjct: 184 YLHRLEEAKRRDHRRIGKELGLFY-FSEDIGPGLPLFTPKGEMLRHLMESYVREVQTRYG 242 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-DRNDKAMIYGPTHEE-VMTDIFRSHIK 123 + + L+ +SG Y++Y + M + + P + MT I Sbjct: 243 YQHVWTGHIVKETLYKKSGHYEAYRENMFPPMIEDEEHVYRLKPMNCPSHMTLYKEMGIH 302 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP F + +R E R G+ R R D + F P+ + + Sbjct: 303 SYRDLPLRFAEFATLYRYEERGTLTGLTRVRALTQDDCHIFCR-PDQIEEEFGLALRLIR 361 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + + +R GG + D + T D Sbjct: 362 EVLETYRFTNYRVRLSLRGEGGK---------------YIADDEAWDLAERALRTALDHY 406 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y +D D L ++S ++ G + Sbjct: 407 SVQYEEAPGEAAIYGPKADFL---AHDVLGREWQLSTIQVDFIQPRRLG--------LEY 455 Query: 303 KGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 DG+ + G V+ G +W + + I D+ Sbjct: 456 IAEDGQPRTPVVLHRAVTGTTERFMGVLIEHFAGAFPLWLA-----PVQAVVIPISDERH 510 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + +L+ G V D E++ ++ A L P +I+G + V ++ R Sbjct: 511 GAYAADVGRQLTAAGLRVEVDLSRERMQAKIRQAQLQKIPYMLIIGDREQHAGAVAVRCR 570 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + + I A Sbjct: 571 SGEDLGAVPVAAFIARARAEIEAK 594 >gi|291004232|ref|ZP_06562205.1| prolyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 581 Score = 222 bits (566), Expect = 9e-56, Method: Composition-based stats. Identities = 98/221 (44%), Positives = 136/221 (61%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SH+L++R G + + GIYSWLPLG + L N+ I+R+E Sbjct: 4 RMSTLFLRTLREDPADAEVPSHRLLVRAGYVRRIGPGIYSWLPLGLRVLRNIEEIVRQEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ P L + + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 64 DAIGAQEIHFPALLPKEPYEATNRWTEYGPNLFRLKDRKGGDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ K+RDE RPR G++R REF+MKD+YSFDL EG +SY +Y Sbjct: 124 YSSYKDYPVILYQIQTKYRDEERPRAGILRGREFVMKDSYSFDLDDEGLTNSYRLHRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 +RIF R+GL+ + + A SG +GG S EF+ A TGE Sbjct: 184 IRIFDRVGLRYVIVAATSGAMGGSASEEFLAEAPTGEDTFV 224 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 68/188 (36%), Positives = 102/188 (54%), Gaps = 4/188 (2%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ + V+ARGIE+GHIF G KY+ S G DGK + MG Sbjct: 395 GTIEAAEVREGDPSPDGEGTLVAARGIEIGHIFQLGRKYADAFSLDALGQDGKPKRITMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R+VAA+ E SHD G++WP VAP + + I D+ R+ E++ A L Sbjct: 455 SYGVGVSRMVAAIAEQSHDELGLVWPREVAPADVH-VVIAGKDESVREGAERLAADLDAA 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G V DD G +FA A+L+G P ++VG K ++ VE+K R +G RE++ ++ + Sbjct: 514 GVRVLLDDRNASPGVKFADAELVGVPTILVVG-KGLAKGVVEVKDRRSGDREEVPVDGAV 572 Query: 436 NYASHRFS 443 + Sbjct: 573 EHLVSTIR 580 >gi|167517909|ref|XP_001743295.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778394|gb|EDQ92009.1| predicted protein [Monosiga brevicollis MX1] Length = 421 Score = 222 bits (566), Expect = 9e-56, Method: Composition-based stats. Identities = 137/418 (32%), Positives = 215/418 (51%), Gaps = 30/418 (7%) Query: 24 KLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVES 83 +L+++ G I Q S G+Y LPL ++ L + ++R E + GA E+S+ TL DLW S Sbjct: 6 QLLVQAGYIAQSSSGMYHMLPLAKRVLGKLENLVRAEMSAIGAQEISLSTLTGKDLWTHS 65 Query: 84 GRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDEL 143 GR+D+ E+ R+ DR PTHEE +T + +S+++S RN+P YQ+ K+RDEL Sbjct: 66 GRWDTVSSELFRVEDRRGAVYCLAPTHEEAITTLAKSYVRSARNMPLYLYQLDRKYRDEL 125 Query: 144 RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG 203 RPR G++R REF MKD Y+FD+ + ++ +Y + +Y +F L + + + A++G IG Sbjct: 126 RPRSGLLRGREFYMKDLYTFDVDEQAARLTYESVVKAYHNLFTHLHVPYVAVEADTGAIG 185 Query: 204 GDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVH 263 G +SHEF VLA GE V D E + E T P A T Sbjct: 186 GSMSHEFQVLAPVGEDSVTVCHTC-DRAANLE---------VMPGSEAGTTPVAPTDHCQ 235 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 E S GIEVGH F G KYS T+ G + G YG+G R Sbjct: 236 FE------------SHAGIEVGHTFLLGHKYSSMFDVTYDSPSGPELAFM-GCYGLGTSR 282 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSKV--GCDVF 380 ++AAV E+ G+ WP S+AP+++++I + A + A + +L++ G DV Sbjct: 283 ILAAVTEALASENGLRWPLSLAPYRVAVITLGASRNDNIESAATCLTEQLNEAMPG-DVL 341 Query: 381 WDDM--GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DD + + A L+G P V+VGS++ + ++E+ +++ ++I Sbjct: 342 LDDRCVDLSLRQKIATMRLIGVPYVVVVGSRY-NARQLEVYDSHNEAPRKIAVHDLIQ 398 >gi|328866339|gb|EGG14724.1| threonyl-tRNA synthetase [Dictyostelium fasciculatum] Length = 706 Score = 222 bits (566), Expect = 9e-56, Method: Composition-based stats. Identities = 80/438 (18%), Positives = 152/438 (34%), Gaps = 41/438 (9%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD L H +S G +LP G + + + IR E +R G E+ Sbjct: 306 MEEAAKRDHRNVGKAQELF--FFHPYSPGCTFFLPHGTRIYNKLVEFIRFEYHRRGFSEV 363 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 PT+ S LW +SG + Y + M + ++ P + +F S +SYR LP Sbjct: 364 ITPTMFSQSLWEQSGHWAKYSENMFPVK-CDNSNYSMKPMNCPGHCLMFASRSRSYRELP 422 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 F + R+E+ G+ R R+F DA+ F T ++ ++ Sbjct: 423 IRFADFGVLHRNEMAGALTGLTRVRKFQQDDAHIFC-TLAQTETEIKSCLEFMQHVYGIF 481 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 G EF + T S + D S + + Sbjct: 482 G------------------FEFSLELSTRPENRLGSDEMWDKAEKSLEVALTNFGKPWKL 523 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A Y D+H + D L + + + ++ F ++ T K D + Sbjct: 524 NPGDGAFYGPKIDIH---ITDVLKRSHQCATIQLD----FQLPIRF-ELEYMTDKAEDLQ 575 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + + R++A +IE + A Q + +++ Sbjct: 576 RPVIIHRAILGSVERMMAILIEHTGGKWPFWVSPRQAIIVPV-------SQQFNEYADQL 628 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 ++ G D + + + A L + ++VG K ++ V ++ R +R+ Sbjct: 629 QKKIVDAGFYCDVDGSDKTLPKKVREAQLAQYNYILVVGQKEKDENTVGVRTRDNVVRDA 688 Query: 429 MSLEEVINYASHRFSNNR 446 +SL+ ++ NN+ Sbjct: 689 ISLDALLAEFDQ---NNK 703 >gi|325293128|ref|YP_004278992.1| Threonyl-tRNA synthetase [Agrobacterium sp. H13-3] gi|325060981|gb|ADY64672.1| Threonyl-tRNA synthetase [Agrobacterium sp. H13-3] Length = 667 Score = 222 bits (565), Expect = 9e-56, Method: Composition-based stats. Identities = 75/449 (16%), Positives = 144/449 (32%), Gaps = 46/449 (10%) Query: 7 FLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L + RD ++ L + G+ W G + + A +R T Sbjct: 234 YLHVLAEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHGKGWRMFQTLTAYMRRRLANT- 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEML-----------RLADRNDKAMIYGPTHEEVM 114 E++ P + LW SG + Y + M D + + P + Sbjct: 291 YQEVNAPQVLDKSLWETSGHWGWYQENMFAVKSAHAFTHPDDEDADQRVFALKPMNCPGH 350 Query: 115 TDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHS 173 IF+ +KSYR +P + R E G+MR R F DA+ F + + Sbjct: 351 VQIFKHGLKSYREMPVRLAEFGNVHRYEASGALHGLMRVRGFTQDDAHVFCTEEQMAAEC 410 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 L ++ G I ++ + P S + A++ +V K + Sbjct: 411 LRIN-DLILSVYEDFGFSEIVVKLSTRPEKRVGSDDLWDRAESVMMEVL--KTIEEQSGG 467 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 T + A Y + L D++ + ++ FG Sbjct: 468 RIKTGI---------LPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG-- 513 Query: 294 YSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 A + + + + G+M ++ + G +W + ++ Sbjct: 514 ------AFYIDQNSEKTQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPLQVVVATIT 567 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 D ++ L + G V D E+I + + P+ ++ G K Sbjct: 568 ------SDADDYGREVAEALREAGMAVETDFRNEKINYKVREHSVTKVPVIIVCGRKEAE 621 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYASHR 441 + V I+ + + MSLE+ I Sbjct: 622 ERTVNIRRLGSQNQTPMSLEDAITSLVEE 650 >gi|225849003|ref|YP_002729167.1| prolyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1] gi|225644474|gb|ACN99524.1| prolyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1] Length = 563 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 112/277 (40%), Positives = 163/277 (58%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M S+YF+P L+ENP +A++ SH ++R G I + GIY +LPLG + L + IIR+ Sbjct: 1 MLASRYFMPTLKENPSEAQVPSHIYLIRGGFIRSLAAGIYEYLPLGFRVLKKIENIIRKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P L A+LW E+GR+D YGKE+ RL DR D GPTHEE +TD+ R Sbjct: 61 MDEAGALELLLPILTPAELWKETGRWDVYGKELFRLKDRKDADFALGPTHEETITDLVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP FYQIQ KFRDE RPR+G++R REF+MKD YSFD++ E + +Y M + Sbjct: 121 NVRSYKDLPLNFYQIQTKFRDEARPRYGLIRGREFIMKDGYSFDVSEEDAIKTYEVMKET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF L L + + A+ G IGG SHEF+V +GE + ++ Sbjct: 181 YHKIFQDLKLDYLMVEADVGAIGGKFSHEFVVKVPSGEAHIVYCENCGYAANVEAAKFHH 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV 277 + + ++ S V F +LP K V Sbjct: 241 HKLPVENLKPLEKVYTPNVSSVEEVAKFLNLPTEKIV 277 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 105/196 (53%), Gaps = 4/196 (2%) Query: 251 QWTAPYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 D+ K D P +N G+EVGHIF GTKYS M A F DGK Sbjct: 369 GRDVKVEEFYDLATAKEGDPCPVCKNPLKETTGLEVGHIFLLGTKYSQAMKAYFTDKDGK 428 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + + MG YGIG R+++A++E HD KGIIWPD VAPF + ++ + D+ A +I Sbjct: 429 EKPIIMGCYGIGVSRLISAIVEQYHDDKGIIWPDVVAPFDLHILVLNVKDEKSLKAGFEI 488 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT-GIRE 427 Y + + G DV D+ GS+F ADL+G P ++++G K +++ KVE + R ++ Sbjct: 489 YEKAKRQGLDVLLDERDISPGSKFKDADLIGIPNRIVIG-KSLNEGKVEYQRRDKVEEKQ 547 Query: 428 DMSLEEVINYASHRFS 443 + L E+ N+ + Sbjct: 548 LVDLLEIDNFLNSLKR 563 >gi|254973700|ref|ZP_05270172.1| prolyl-tRNA synthetase [Clostridium difficile QCD-66c26] gi|255091090|ref|ZP_05320568.1| prolyl-tRNA synthetase [Clostridium difficile CIP 107932] gi|255312745|ref|ZP_05354328.1| prolyl-tRNA synthetase [Clostridium difficile QCD-76w55] gi|255515506|ref|ZP_05383182.1| prolyl-tRNA synthetase [Clostridium difficile QCD-97b34] gi|255648598|ref|ZP_05395500.1| prolyl-tRNA synthetase [Clostridium difficile QCD-37x79] gi|260681818|ref|YP_003213103.1| prolyl-tRNA synthetase [Clostridium difficile CD196] gi|260685415|ref|YP_003216548.1| prolyl-tRNA synthetase [Clostridium difficile R20291] gi|306518722|ref|ZP_07405069.1| prolyl-tRNA synthetase [Clostridium difficile QCD-32g58] gi|260207981|emb|CBA60132.1| prolyl-tRNA synthetase [Clostridium difficile CD196] gi|260211431|emb|CBE01529.1| prolyl-tRNA synthetase [Clostridium difficile R20291] Length = 571 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 124/310 (40%), Positives = 174/310 (56%), Gaps = 4/310 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK F+P L+E P DAEI SH+LM+R+GMI + + G+Y+ LP+G + + IIREE Sbjct: 1 MKMSKMFMPTLKEIPADAEITSHQLMVRSGMIKKMTSGVYNQLPMGLRVFKKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ E+ L ++LW ESGR+ + G+EM RL DR ++ GPTHEE TDI R Sbjct: 61 LNKKDCQEILCAALLPSELWKESGRWTAMGEEMFRLKDRTEREYCLGPTHEEAFTDIIRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ+K+RDE RPRFGVMR++ F MKDAYSFD+ +G SY MF + Sbjct: 121 EITSYKQLPLNLYQIQVKYRDERRPRFGVMRTKTFTMKDAYSFDVDDKGLDKSYQDMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ IF R GL++ P++A+SG IGG S EF+V ++ GE +V D+ E + Sbjct: 181 YVSIFDRCGLENSPVQADSGAIGGSTSAEFMVKSEVGEDEVVFCSGC-DYAANVERAESC 239 Query: 241 DIISLNSIV---EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 ++ S + E+ P AAT E L S + + + + Sbjct: 240 NLASQKEEMKELEEVHTPGAATIKELEEFLKTSPDKFAKTLVYEADGKTVVVVVRGDREV 299 Query: 298 MSATFKGADG 307 A G Sbjct: 300 NEIKVSNAIG 309 Score = 150 bits (378), Expect = 6e-34, Method: Composition-based stats. Identities = 68/169 (40%), Positives = 93/169 (55%), Gaps = 3/169 (1%) Query: 255 PYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 D N + D ARG+EVGHIF GTKYS M+A F DGK + Sbjct: 375 FEGIVGDFRNVQEGDQCIVCGKPLEIARGVEVGHIFKLGTKYSESMNANFIDKDGKSKPI 434 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R AA+IE +D KGIIWP SVAP+ + ++ ++ E IY L Sbjct: 435 VMGCYGIGVERTAAAIIEQHNDEKGIIWPLSVAPYHVVIVPANMKNEEQISIAENIYNDL 494 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +G +V DD E+IG +F ++L+G P+++ VG K +++ KVE K R Sbjct: 495 QAMGVEVLLDDRDERIGVKFNDSELIGIPMRITVG-KNINEGKVEFKLR 542 >gi|160935092|ref|ZP_02082478.1| hypothetical protein CLOLEP_03968 [Clostridium leptum DSM 753] gi|156866545|gb|EDO59917.1| hypothetical protein CLOLEP_03968 [Clostridium leptum DSM 753] Length = 660 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 78/454 (17%), Positives = 158/454 (34%), Gaps = 44/454 (9%) Query: 2 RRSKYFLP---ILQENPRDAEIASHKLMLRTGMIHQ---HSKGIYSWLPLGQKALDNVNA 55 + S+ + + RD +L G +G+ LP G + + + Sbjct: 239 KASELTAHLEAMEEAKKRDHNKLGREL----GYFTTCDIIGQGLPILLPNGARVIQLLQR 294 Query: 56 IIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEV 113 + +E+ + G + P + +DL+ SG +D Y M +++D+ P Sbjct: 295 FVEDEEQKRGWLLTKTPYMAKSDLYKLSGHWDHYKDGMFVLGDEEKDDEVFALRPMTCPF 354 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 + + +SYR+LP + + FR+E G++R R+F + + + + + Sbjct: 355 QYQAYLNKKRSYRDLPLRYNETSTLFRNEASGEMHGLIRVRQFTISEGHLMCRPDQLEEE 414 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 + L+ E+ + D+S+ F + + + + D Sbjct: 415 F-------------KSCLQLANYMLETLGLAEDVSYRFSQWDPEDKDKYIGTPEQWDEAQ 461 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + D + +I A Y D+ + +F + + I+ FG Sbjct: 462 SAMKRILDHLGIEYAIGVGEAAFYGPKLDIQIKNVF---GKEDTLITIQIDQLLAEKFG- 517 Query: 293 KYSLPMSATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + ADGK + + IG A++ + G +W + + Sbjct: 518 -------MEYVDADGKAKNPYIIHRTSIGCYERTLALLIEKYAGALPMWLMPEQVRVLPI 570 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + D ++ L G D E+IG + A + P +I+G K V Sbjct: 571 ------SEKFLDKALEVDRELKAQGIRSTADSRNEKIGYKIREAQMEKIPYMLIIGEKEV 624 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ V ++ R G+ MSLE + A Sbjct: 625 QENVVSVRSRKDGVLGSMSLETFLEKALTEIREK 658 >gi|188997600|ref|YP_001931851.1| prolyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1] gi|226701347|sp|B2V6W5|SYP_SULSY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|188932667|gb|ACD67297.1| prolyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1] Length = 564 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 118/287 (41%), Positives = 164/287 (57%), Gaps = 17/287 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK+F+P L+ENP DA + SH ++R G I S GIY +LPLG K L + IIR+ Sbjct: 1 MLASKFFMPTLKENPSDAVVPSHIYLVRGGFIRSLSAGIYEYLPLGLKVLRKIENIIRKH 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + +GA+E+ +P L A+LW E+GR+ YGKE+ RL DR D GPTHEE +TD+ R Sbjct: 61 MDDSGALEVLLPILTPAELWKETGRWHVYGKELFRLKDRKDAEFALGPTHEETITDLVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP FYQIQ KFRDE RPR+G++R REF+MKD YSFD++ E +K +Y M + Sbjct: 121 NVRSYKDLPLNFYQIQTKFRDEARPRYGLIRGREFIMKDGYSFDVSEEDAKKTYEVMKEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF------------- 227 Y +IF LGL + + A+ G IGG SHEF+V +GE + + Sbjct: 181 YHKIFKELGLDYLMVEADVGAIGGKFSHEFVVKVPSGEAHIVYCEKCGYAANVEAAKFHH 240 Query: 228 ----MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 + P P E DI S+ + P K+ D Sbjct: 241 HKLPPEEPKPIEKVYTPDIKSVEDVANFLNVPLTKLVKTLIYKIDDK 287 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 69/185 (37%), Positives = 105/185 (56%), Gaps = 3/185 (1%) Query: 256 YAATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 + D+ K D P G+EVGHIF GTKYS M A F DGK+ + Sbjct: 375 VSGFYDLATAKEGDPCPVCHLPLKETTGLEVGHIFLLGTKYSESMKAYFVDKDGKEKSII 434 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R+++A++E HD KGIIWP+++APF + ++ + DQ + IY +L Sbjct: 435 MGCYGIGVSRLISAIVEQYHDDKGIIWPENLAPFNVHILVLNPKDQESLNVGFDIYKKLK 494 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G DV D+ E G++F ADL+G P ++++G K + + KVE + R I+E + ++ Sbjct: 495 EKGLDVLLDERDESAGAKFKDADLIGIPHRIVIG-KALKEGKVEYQKRDGSIKELVDVKL 553 Query: 434 VINYA 438 +IN Sbjct: 554 IINKL 558 >gi|83954081|ref|ZP_00962801.1| threonyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1] gi|83841118|gb|EAP80288.1| threonyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1] Length = 649 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 145/442 (32%), Gaps = 45/442 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD ++ L + + + G W G + +R +Q Sbjct: 234 KAHLNMLEEAAKRDHRKLGREMDLY--HMQEEAPGQVFWHANGWLIYTQLQDYMRRKQRA 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G +E++ P + LW SG ++ Y M + R P + IF Sbjct: 292 GGYVEVNTPQVVDRKLWEASGHWEKYQDHMFIVEVDEEHAREKSVNALKPMNCPCHVQIF 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F D + F + + K Sbjct: 352 NQGLKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCA-EDQIEAETAKF 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 I+ LG ++ ++ P S E D + + Sbjct: 411 IEFLSGIYKDLGFENFSVKFSDRPEKRSGSDE-----------------VWDKAEAALLS 453 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 ++ A Y + L D++ + + ++ F + Sbjct: 454 ATRKAGIEPTLNPGEGAFYGPKLEF---VLTDAIGRDWQCGTHQVD----FVLPER---- 502 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + AT+ G+DG H + +G+ ++ H GK W S+ Sbjct: 503 LDATYIGSDGAKHRPVMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASIT---- 558 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++ A L G D E+I + + P+ + VG++ V + V Sbjct: 559 --SEADDYVHEVVATLKAQGVRAEADIRNEKINYKVREHSVGKVPVILAVGAREVEEKTV 616 Query: 417 EIKHRLTGIREDMSLEEVINYA 438 ++ +L +V N Sbjct: 617 SVRRLGEKQTSVQALSDVANAL 638 >gi|298489744|ref|YP_003719921.1| prolyl-tRNA synthetase ['Nostoc azollae' 0708] gi|298231662|gb|ADI62798.1| prolyl-tRNA synthetase ['Nostoc azollae' 0708] Length = 597 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 115/240 (47%), Positives = 152/240 (63%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S L+++P DAEI SH+L+LR G I + G+Y++LPL + L V+ I+REE Sbjct: 1 MRLSNKLFVTLRDDPGDAEIPSHQLLLRAGYIRRIGSGVYAYLPLMWRVLQKVSQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N TGA E +P LQ A+LW +SGR+D+Y K M L DR ++ + GPTHEEV+T + Sbjct: 61 MNATGAEECLLPQLQPAELWKDSGRWDTYTKAEGIMFSLIDRREQQLGLGPTHEEVITTV 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R I+SYR LP YQIQ KFRDE+RPRFG+MRSREF+MKD YSF E K +Y M Sbjct: 121 ARDMIRSYRQLPLHLYQIQTKFRDEIRPRFGLMRSREFIMKDGYSFHTDEESLKKTYQDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 + +Y + R GL + A+SG IGG S EF+VLAD GE +V ++D + E Sbjct: 181 YQAYSNMLRRAGLAFRAVEADSGAIGGSGSTEFMVLADAGEDEVLYTEDG-KYAANVEKA 239 Score = 171 bits (434), Expect = 2e-40, Method: Composition-based stats. Identities = 67/200 (33%), Positives = 105/200 (52%), Gaps = 5/200 (2%) Query: 247 SIVEQWTAPYAATSDVHNEKLFDSL---PENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + EQ+ P D+ ++ D P +ARGIEVGHIF GTKYS M AT+ Sbjct: 400 NWCEQFKLPE-LVVDIRKARVGDRSLHDPSQTLKTARGIEVGHIFQLGTKYSEAMGATYI 458 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 G+ + MG YG+G R+ + +E S+D GIIWP ++AP+ + D + Sbjct: 459 NEQGEKKPLIMGCYGVGVSRLAQSAVEQSYDKDGIIWPVAIAPYHSIITIPNIKDAQQIE 518 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 EK+Y L+K G + DD E+ G +F ADL+G P +++ G + +++ KVE+ R Sbjct: 519 VAEKLYTELNKAGVETLLDDRDERAGVKFKDADLIGIPFRIVTG-RAIANGKVEVVKRAN 577 Query: 424 GIREDMSLEEVINYASHRFS 443 + +++EEV+N Sbjct: 578 RESQQIAIEEVVNTLQQWLK 597 >gi|296122745|ref|YP_003630523.1| prolyl-tRNA synthetase [Planctomyces limnophilus DSM 3776] gi|296015085|gb|ADG68324.1| prolyl-tRNA synthetase [Planctomyces limnophilus DSM 3776] Length = 590 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 125/291 (42%), Positives = 172/291 (59%), Gaps = 5/291 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F+P L+ENP DAEI SH+LMLR G + Q G Y++LPLG +++ + AIIREE Sbjct: 1 MRWSQSFIPTLKENPSDAEIPSHQLMLRAGYVRQLMAGAYTYLPLGWRSIRKIEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADR---NDKAMIYGPTHEEVMTDI 117 + TGA+EM +P LQ DL+ +GR +++G ++ R + + GPTHEEV+TD+ Sbjct: 61 MDATGALEMLMPALQPIDLFERTGRKEAFGNVLINFNIRRQNHQVHLALGPTHEEVVTDL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 HI SYR LP T YQIQ KFR+E RPRFGV+R+ EF+MKDAYSF + E +Y K+ Sbjct: 121 MSRHISSYRQLPMTVYQIQTKFRNEERPRFGVLRTSEFIMKDAYSFHSSVESLSETYQKI 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 + +Y RIF R GL+ +P+ AESGPIGGD SHEF+ A GE Q+ + + E Sbjct: 181 YRAYCRIFARCGLEYLPVEAESGPIGGDASHEFMAPAANGEDQIVFCRKTR-YAANLERA 239 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIF 288 + + S V+ P + N D+L + IF Sbjct: 240 ETGRVRSQVKPVDT-ALPASEKLHTPNVGSIDALCRLLNCQPTQLIKTLIF 289 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 58/218 (26%), Positives = 106/218 (48%), Gaps = 3/218 (1%) Query: 232 IPSENTDFDDII-SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR--GIEVGHIF 288 +E+ +++ + + + T D+ N D P + GIEVGH+F Sbjct: 364 ANAEDYHLANVVLGRDFDLPRTAEGEYETFDLRNAAAGDPSPRGEGTLELVHGIEVGHVF 423 Query: 289 YFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 GTKYS+ ++AT+ + MG YGIG R++A++ E+ D G++ P S+AP+ Sbjct: 424 KLGTKYSVSLNATYDDEAATRQPLIMGCYGIGVNRILASMAETKFDDNGLVLPLSIAPYS 483 Query: 349 ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGS 408 + + I +D + ++ L+ G D+ DD ++ G +F ADL+G PL+V++G Sbjct: 484 VVISTIGVNDPEVDEVVNQLEKELTAAGVDLLIDDRDQRPGVKFKDADLIGIPLRVVIGG 543 Query: 409 KFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 K + + +VE+K R + + + + R Sbjct: 544 KGLKEGQVELKWRHLPEATKIPVTGAAQAILDQLATRR 581 >gi|227833360|ref|YP_002835067.1| Prolyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] gi|262184346|ref|ZP_06043767.1| prolyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] gi|254782894|sp|C3PH25|SYP_CORA7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|227454376|gb|ACP33129.1| Prolyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] Length = 589 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 105/282 (37%), Positives = 154/282 (54%), Gaps = 5/282 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+E+P DAE+ SHKL++R G + + + G+Y+WLPLG +A+ + +IR+E Sbjct: 4 RLSELFLRTLREDPADAEVPSHKLLVRAGYVRRVAPGVYTWLPLGLRAMRKIEDVIRQEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G EM P L + + ES R+ YG + RL DR M+ GPTHEE+ T + Sbjct: 64 NAIGGQEMLFPALLPREPYEESNRWTEYGDNLFRLKDRKGADMLLGPTHEEMFTTAVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR GV+R REF MKD+YSFD+T EG SY + +Y Sbjct: 124 YSSYKDFPVTLYQIQTKYRDEERPRAGVLRGREFTMKDSYSFDMTDEGLDESYARHRKAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 IF RL + +A SG +GG S EF+ +++ GE F ++ E Sbjct: 184 QNIFDRLEIDYAICKATSGAMGGSASEEFLAVSEVGE-DTFVRATEGEYAANVEAVVTQA 242 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 ++ P A + + +SL E + + ++ Sbjct: 243 PEEISF----EGLPEAQEHETPKSETIESLVEWAKGAGITVD 280 Score = 137 bits (346), Expect = 3e-30, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 6/189 (3%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 + K D P + RGIE+GHIF G KY+ +GK MG Sbjct: 403 EFIEAAEVKEGDPAPNGQGTLTLERGIELGHIFQLGRKYTEAFDVQILDENGKRAVPTMG 462 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R++A + E HD KG+ WP +VAP+++ + D +A +K+ L + Sbjct: 463 SYGIGVTRMLAVLAEQRHDEKGLNWPVAVAPYQVHVAVAN-KDAAALEAGQKLVEDLDRA 521 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD G +F A+LLG P I+G + +D +E++ R G ++ + + Sbjct: 522 GIEVLYDDRPKVSPGVKFKDAELLGMPFIAILG-RAFADGIIELRIRG-GETREVPADSI 579 Query: 435 INYASHRFS 443 ++ + Sbjct: 580 VDTLTELIR 588 >gi|325067070|ref|ZP_08125743.1| prolyl-tRNA synthetase [Actinomyces oris K20] Length = 605 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 99/284 (34%), Positives = 150/284 (52%), Gaps = 2/284 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S F+ L+E+P DAE+ASH+L++R + + + G+Y+WLPLG + L + I+R+E Sbjct: 4 RLSTSFIRTLREDPADAEVASHRLLVRACYVRRAAPGVYTWLPLGLRTLRKIEDIVRQEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ P L A+ + +GR+D YG + +L DR D + PTHEE+ T + Sbjct: 64 DAMGGQEVHFPALLPAEPYQATGRWDDYGPTLFKLRDRKDGDYLLAPTHEEMFTLAVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G +Y +Y Sbjct: 124 YSSYKDLPAVIYQIQTKYRDEARPRAGIIRGREFVMKDSYSFDIDDAGLAAAYQAHRDTY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF RLGL + + A +G +GG S EF+ + GE S + T + Sbjct: 184 ERIFTRLGLDYVIVNAMAGAMGGSHSEEFLHPCEIGEDTFVRSSSGYAANAEAVTTVVPE 243 Query: 242 IISLNSIVEQWTA--PYAATSDVHNEKLFDSLPENKRVSARGIE 283 + + I P T D E + P + + + Sbjct: 244 AVDASGIGPARVVDTPDTPTIDSLVELCNRAYPRSDGRAWTAAD 287 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 69/189 (36%), Positives = 97/189 (51%), Gaps = 4/189 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ ARGIE+GHIF G KYS + T +GK V MG Sbjct: 415 GTIEAAEVREGDPAPDGSGPLHLARGIEIGHIFELGRKYSQALGLTVLDENGKARVVTMG 474 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG RV+AA+ E++HD KG+ WP +AP+ + ++ DQ D E+I + L Sbjct: 475 SYGIGVSRVMAALAEANHDDKGLTWPVQIAPYHVQVLATG-KDQAVFDVAEQIASSLDAD 533 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD G +FA A+LLG P ++VG + VEI+ R TG R +S + Sbjct: 534 GVEVLYDDRRKVSAGVKFADAELLGLPYTLVVGRDLAKEGTVEIRDRRTGERRSVSADAA 593 Query: 435 INYASHRFS 443 S Sbjct: 594 AAELSSTVR 602 >gi|160946442|ref|ZP_02093651.1| hypothetical protein PEPMIC_00402 [Parvimonas micra ATCC 33270] gi|158447558|gb|EDP24553.1| hypothetical protein PEPMIC_00402 [Parvimonas micra ATCC 33270] Length = 567 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 111/263 (42%), Positives = 163/263 (61%), Gaps = 2/263 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ +Y++P L+E+P++AEI SHKL+LR GMI + + GIYS+LPLG + + V I+REE Sbjct: 1 MKMKRYYMPTLREDPQEAEIISHKLLLRAGMIRKSAAGIYSYLPLGYRTIRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G E+ + LQ ++W ESGR+ ++G EM ++ DRN++ GPT EE T + Sbjct: 61 MDRMGGYEILMSALQPKEIWEESGRWQTFGPEMFKVKDRNEREFCLGPTAEEYFTTLISG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFG+ R+REF MKDAY+FD++PE SY +M+ + Sbjct: 121 EIKSYKQLPLNIYQIQTKYRDEKRPRFGINRAREFSMKDAYTFDVSPEMMMESYKEMWKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI--PSENTD 238 Y ++F+RLGL + ++G +GG+ SHEFI L+D GE + + +E Sbjct: 181 YEKVFNRLGLNYKIVAGDAGAMGGNSSHEFIALSDVGEGVICYCDESGYAATDEKAEVIY 240 Query: 239 FDDIISLNSIVEQWTAPYAATSD 261 D +E P T + Sbjct: 241 KVDESGDEKELELVYTPNCKTIE 263 Score = 156 bits (394), Expect = 7e-36, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 100/196 (51%), Gaps = 1/196 (0%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A + E + ARGIEVG+IF GTKYS ++ATF +G Sbjct: 373 DFDGEIADDLLMVQEGDVCPISGKPLKFARGIEVGNIFQLGTKYSKALNATFLDENGVSQ 432 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 Y MGS+GIG R + A+IE ++D KGIIWP VAP+ + + +D+ EKI+ Sbjct: 433 YFWMGSHGIGITRSITAIIEQNNDEKGIIWPIQVAPYHAIVTVVNINDEEQMKLGEKIHD 492 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L G +V DD E+IG +F DL+G PL++ VG K +++ +E R +MS Sbjct: 493 ELEAQGVEVMLDDRKERIGVKFNDRDLIGIPLRITVGKK-ANENIIEFSTRREMENVEMS 551 Query: 431 LEEVINYASHRFSNNR 446 E+ IN + Sbjct: 552 SEDAINIVVEEVRKIK 567 >gi|323447698|gb|EGB03610.1| hypothetical protein AURANDRAFT_55515 [Aureococcus anophagefferens] Length = 657 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 75/435 (17%), Positives = 156/435 (35%), Gaps = 38/435 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKG-IYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + + RD + KL L + I + + G + W P G + + + R G Sbjct: 227 RLEEAKKRDHRVLGKKLDLFS--IQEAAGGGLCFWHPRGARIRMLMEDTWKAAHERGGYE 284 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 + P + + DLW SG +D Y + M D + P + +++ ++SYR+ Sbjct: 285 LLVTPHIANVDLWKTSGHFDFYAEGMFDQMDVEKEQYQLKPMNCPFHCLVYKDQLRSYRD 344 Query: 128 LPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LPF + ++ +R E G+MR R F DA+ F + + I Sbjct: 345 LPFRWAELGTVYRYERSGTLQGLMRVRGFTQDDAHIFCTPEQLEDEIVA-VLELTEEILS 403 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 + G + + P + S + + D + Sbjct: 404 KFGFDDYELMLSTRP-----------------DKAVGSDEIWTKATAALKGALDRKGWDH 446 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 + E A Y D+ K+ D+L + S + F ++ L A + Sbjct: 447 GVDEGGGAFYGPKIDL---KIKDALGRQWQCSTVQCD----FNLPERFELEYRAA---SG 496 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + + + G++ A++ + G P +AP ++ L+ + RD + Sbjct: 497 QAERPIMVHRAIFGSLERFFAILL---ESCGGDLPLWLAPTQMRLLPVT---DDARDFSK 550 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + A+ ++ G D +++ Q A+ P+ +VG K ++ + ++ R G Sbjct: 551 AVAAKAAQRGIRCEIDSGKDRLNKQIRNAETQRVPIMCVVGEKEMASGDLAVRARTMGDL 610 Query: 427 EDMSLEEVINYASHR 441 + ++ + + Sbjct: 611 GTIDVDALFDELKDL 625 >gi|304440717|ref|ZP_07400601.1| proline--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304370904|gb|EFM24526.1| proline--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 582 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 109/254 (42%), Positives = 160/254 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K ++P L+E P DAE+ SHKL+LR MI + + GIYS+LPLG + + + I+REE Sbjct: 1 MRLTKLYMPTLREVPTDAEVESHKLLLRAAMIRRSTTGIYSYLPLGYRVVRKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ + +Q A++W ESGR+D +G EM +L DRN + GPT EE T + + Sbjct: 61 MDRAGSQEILMSAIQPAEIWEESGRWDKFGPEMFKLVDRNGRDFCLGPTAEEYFTTLVKD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ K+RDE RPRFG+ R+REFLMKDAYSFD EG + SY+ + + Sbjct: 121 EVSSYKQLPLNIYQIQTKYRDEKRPRFGINRAREFLMKDAYSFDKDEEGLQKSYDMYYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F RL L + ++G +GG +SHEFI L++TGE +F S++ + Sbjct: 181 YQNVFDRLSLDYKIVEGDNGAMGGHMSHEFIALSETGEGIIFYSENSDKAYTEEKAPVHY 240 Query: 241 DIISLNSIVEQWTA 254 D + + +E+ Sbjct: 241 DFVDTSEPLEKEEV 254 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 69/187 (36%), Positives = 99/187 (52%), Gaps = 3/187 (1%) Query: 258 ATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 D+ D +P + + RGIEVG+IF GTKYS + ATF +GK Y MG Sbjct: 380 VVEDLLMAVEGDKIPGTDEVYKTRRGIEVGNIFQLGTKYSEALDATFLDENGKSQYFVMG 439 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R V+AV+E HD GI+WP ++AP++I + + + + EK++A L + Sbjct: 440 SYGIGVTRSVSAVVEQYHDDHGIVWPMAIAPYQIIITVMNPKKEEQLELGEKLHAALVNM 499 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD G +F DL+G PL++ VG K DS VE R +M+ +E I Sbjct: 500 GYEVLLDDRNVGAGVKFNDRDLIGIPLRITVGKK-AQDSIVEFSRRDNRENIEMTSKEAI 558 Query: 436 NYASHRF 442 + Sbjct: 559 DRVVSEM 565 >gi|239917224|ref|YP_002956782.1| prolyl-tRNA synthetase, family II [Micrococcus luteus NCTC 2665] gi|281414302|ref|ZP_06246044.1| prolyl-tRNA synthetase [Micrococcus luteus NCTC 2665] gi|259511606|sp|C5C9S6|SYP_MICLC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|239838431|gb|ACS30228.1| prolyl-tRNA synthetase, family II [Micrococcus luteus NCTC 2665] Length = 608 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 102/239 (42%), Positives = 142/239 (59%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+++P +AE+ASH+L++R G I + + GIYSWLPLG K L V I+REE Sbjct: 4 RMSTLFLRTLRDDPAEAEVASHRLLVRAGYIRRAAPGIYSWLPLGLKVLAKVERIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ P L + + +GR+D YG + RL DR + PTHEE+ T + + Sbjct: 64 DAIGAQEVHFPALLPREPYEATGRWDEYGDGLFRLQDRRGNDYLLAPTHEEMFTLLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSF + G +Y +Y Sbjct: 124 YSSYKDLPAYLYQIQTKYRDEARPRAGLLRGREFIMKDSYSFTVDDAGLDAAYEAHRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 LRIF RLGL+ +P+RA SG +GG S EF+ + GE S + + T Sbjct: 184 LRIFDRLGLEVVPVRATSGAMGGSRSEEFLHPTEVGEDTFVESDGGYRANVEAVTTVAP 242 Score = 137 bits (345), Expect = 4e-30, Method: Composition-based stats. Identities = 57/176 (32%), Positives = 86/176 (48%), Gaps = 3/176 (1%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 + RG+E+GHIF G KY+ + GK V MGSYGIG R VAA+ E Sbjct: 435 GSGPLHTRRGMEMGHIFQLGRKYAEALDLKVLDVHGKQVVVTMGSYGIGITRAVAAIAER 494 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGS 390 HD KG+ WP +VAP + + + + A E + A L G V DD G Sbjct: 495 YHDDKGLAWPRAVAPADVH-VVVATKGEDGLAAAETLAASLEAEGLTVLVDDRPKVSPGV 553 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 +F A+L+G P V++G + ++D ++E+K R TG + ++ + + R Sbjct: 554 KFKDAELIGVPTTVVIG-RGLADGELELKDRATGEARPVPVDGAVAAVLAEVRDGR 608 >gi|126697615|ref|YP_001086512.1| prolyl-tRNA synthetase [Clostridium difficile 630] gi|255099207|ref|ZP_05328184.1| prolyl-tRNA synthetase [Clostridium difficile QCD-63q42] gi|255304990|ref|ZP_05349162.1| prolyl-tRNA synthetase [Clostridium difficile ATCC 43255] gi|123174666|sp|Q18CD2|SYP1_CLOD6 RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA ligase 1; Short=ProRS 1 gi|115249052|emb|CAJ66863.1| Prolyl-tRNA synthetase [Clostridium difficile] Length = 571 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 124/310 (40%), Positives = 174/310 (56%), Gaps = 4/310 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK F+P L+E P DAEI SH+LM+R+GMI + + G+Y+ LP+G + + IIREE Sbjct: 1 MKMSKMFMPTLKEIPADAEITSHQLMVRSGMIKKMTSGVYNQLPMGLRVFKKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ E+ L ++LW ESGR+ + G+EM RL DR ++ GPTHEE TDI R Sbjct: 61 LNKKDCQEILCAALLPSELWKESGRWTAMGEEMFRLKDRTEREYCLGPTHEEAFTDIIRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ+K+RDE RPRFGVMR++ F MKDAYSFD+ +G SY MF + Sbjct: 121 EITSYKQLPLNLYQIQVKYRDERRPRFGVMRTKTFTMKDAYSFDVDDKGLDKSYQDMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ IF R GL++ P++A+SG IGG S EF+V ++ GE +V D+ E + Sbjct: 181 YVSIFDRCGLENSPVQADSGAIGGSTSAEFMVKSEVGEDEVVFCSGC-DYAANVERAESC 239 Query: 241 DIISLNSIV---EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 ++ S + E+ P AAT E L S + + + + Sbjct: 240 NLASQKEEMKELEEVHTPGAATIKELEEFLKTSPDKFAKTLVYEADGKTVVVVVRGDREV 299 Query: 298 MSATFKGADG 307 A G Sbjct: 300 NEIKVSNAIG 309 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 68/169 (40%), Positives = 93/169 (55%), Gaps = 3/169 (1%) Query: 255 PYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 D N + D ARG+EVGHIF GTKYS M+A F DGK + Sbjct: 375 FEGIVGDFRNVQEGDKCIVCGKPLEIARGVEVGHIFKLGTKYSESMNANFIDKDGKSKPI 434 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R AA+IE +D KGIIWP SVAP+ + ++ ++ E IY L Sbjct: 435 VMGCYGIGVERTAAAIIEQHNDEKGIIWPLSVAPYHVVIVPANMKNEEQISIAENIYNDL 494 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +G +V DD E+IG +F ++L+G P+++ VG K +++ KVE K R Sbjct: 495 QAMGVEVLLDDRDERIGVKFNDSELIGIPMRITVG-KNINEGKVEFKLR 542 >gi|296269038|ref|YP_003651670.1| prolyl-tRNA synthetase [Thermobispora bispora DSM 43833] gi|296091825|gb|ADG87777.1| prolyl-tRNA synthetase [Thermobispora bispora DSM 43833] Length = 580 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 103/239 (43%), Positives = 143/239 (59%), Gaps = 1/239 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G I + + G+YSWLPLG+ L+N+ ++REE Sbjct: 4 RMSTLFLRTLREDPADAELPSHKLLVRAGYIRRVAPGVYSWLPLGKIVLENIARVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 +R GA E+ P L + + +GR+ YG + RL DR + GPTHEE+ TD+ + Sbjct: 64 DRMGAQEVLFPALLPREYYEATGRWTEYGDTLFRLKDRKGADYLLGPTHEEMFTDMVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SY++ P T YQIQ K+RDE RPR G++R+REF+MKD+YSFDL +G K SY +Y Sbjct: 124 LSSYKDFPVTLYQIQTKYRDEARPRAGLLRAREFVMKDSYSFDLDDDGLKRSYEAHRETY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 +RIF RLGL A SG +GG S EF+ GE + +E Sbjct: 184 IRIFDRLGLDYRICFAVSGAMGGSASEEFLAPCPNGEDTFVAC-HGCGYAANAEAVVTP 241 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 63/184 (34%), Positives = 90/184 (48%), Gaps = 6/184 (3%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + K D+ P RGIE+GHIF G KYS G DGK + MG Sbjct: 394 GTIEAAEIKPGDACPRCGGPLSIDRGIEIGHIFQLGRKYSDAAGLDALGPDGKPIRITMG 453 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VA + E HD G++WP VAP + + + + ++ L Sbjct: 454 SYGIGVSRLVAVIAEQRHDELGLVWPREVAPADVH--IVGTGKENQIEVAVELAETLESR 511 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G V DD G G +F A+LLG P VIVG + +++ +E++ R +G RE++ L E Sbjct: 512 GLRVLVDDRPGVSPGVKFKDAELLGMPTIVIVG-RGLANGVLELRDRASGAREEIPLGEA 570 Query: 435 INYA 438 + Sbjct: 571 ADRI 574 >gi|195035423|ref|XP_001989177.1| GH11579 [Drosophila grimshawi] gi|193905177|gb|EDW04044.1| GH11579 [Drosophila grimshawi] Length = 493 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 77/432 (17%), Positives = 150/432 (34%), Gaps = 40/432 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + +IR E + G E+ Sbjct: 88 EEAAKRDHRKIGREQELF--FFHELSPGSCFFQPRGAHIYNTLMNLIRGEYRKRGFQEVI 145 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + +A LW+ SG + Y M +K P + IF + +S+R LP Sbjct: 146 SPNIYNAKLWMTSGHWQHYADNMFSFEAEKEK-FALKPMNCPGHCLIFDNRNRSWRELPL 204 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + ++ G Sbjct: 205 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEM-KGCLDFLRHVYTIFG 263 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 F ++ T Q + D + D+ Sbjct: 264 FS------------------FQLVLSTRPEQYLGELEQWDAAEKALAESLDEFGMPWKEN 305 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + + ++ F +++L A K Sbjct: 306 HGDGAFYGPKIDI---TIMDALKRPFQCATIQLD----FQLPIRFNLNYIA---DDGEKK 355 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + +G++ + A++ + WP ++P ++ ++ + + + + Sbjct: 356 RPVIIHRAILGSVERMIAILT---ENYAGKWPFWLSPRQVMVVPVGP---AYDEYAKSVR 409 Query: 370 ARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L G D D G+ + + A L F ++VG K S + V ++ R + + Sbjct: 410 DQLYAAGFMSESDCDAGDTMNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGE 469 Query: 429 MSLEEVINYASH 440 +S+ E+I+ Sbjct: 470 VSVAELISKLQK 481 >gi|17232215|ref|NP_488763.1| threonyl-tRNA synthetase [Nostoc sp. PCC 7120] gi|17133860|dbj|BAB76422.1| threonyl-tRNA synthetase [Nostoc sp. PCC 7120] Length = 612 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 83/443 (18%), Positives = 160/443 (36%), Gaps = 38/443 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKG-IYSWLPLGQKALDNVNAIIREEQNRT 64 Y + RD +L L + I + + G + W P G + R+ + Sbjct: 206 YLKQREEALRRDHRKLGQELNLFS--IQEEAGGGLVFWHPKGASIRYIIEDYWRKCHLES 263 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + + DLW SG +D Y + M + ++A P + ++ + S Sbjct: 264 GYQLLYTPHVANLDLWKTSGHFDFYQENMFDSMEVENQAYQIKPMNCPFHVLTYKHQLHS 323 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + ++ +R E G+MR R F DA+ F L + + + Sbjct: 324 YRELPLRWAELGTVYRYERSGALHGLMRVRGFTQDDAHIFCLPHQIADE-ILGVLNLTEH 382 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I G K+ + + P ++E + + D Sbjct: 383 ILSDFGFKNYEVNLSTRPDKSVGNNE-----------------VWELATSALRQALDAKG 425 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D+ K+ D++ + S ++ F ++ + AT Sbjct: 426 WNYIVDEGGGAFYGPKIDI---KIQDAIGRLWQCSTIQVD----FNLPERFDMEYIAT-- 476 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + + G++ ++ + +P +AP +I L+ + R Sbjct: 477 -DGSRQRPIMIHRAIFGSLERFFGILI---ENYAGDFPLWLAPVQIRLLPV---SDDVRG 529 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E + L K G V D GE++G Q A+L P+ +VG K V + + ++ R Sbjct: 530 YTESVAIALQKDGFRVEIDISGERLGKQIRTAELEKIPVVGVVGKKEVENQNLSVRTRAN 589 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 G ++L ++ N+ + Sbjct: 590 GDLGAINLNDLTNHLRETIIAKK 612 >gi|295105820|emb|CBL03363.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Gordonibacter pamelaeae 7-10-1-b] Length = 637 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 73/440 (16%), Positives = 149/440 (33%), Gaps = 46/440 (10%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD +L + M G+ +LP G + + + +R + G E+ Sbjct: 232 LEEAEKRDHRKLGRELGIYV-MDPLAGAGLPLYLPKGARIIRTLQEWLRRDLYTRGYEEV 290 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDK-------AMIYGPTHEEVMTDIFRSHI 122 P + +AD+W SG Y Y + M P + +++S + Sbjct: 291 ITPHIYNADVWKTSGHYGFYKENMYFFEINEGDDENPRMTEYAVKPMNCPGHVMLYKSEL 350 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+LP +++ +R E+ G++R+R F DA+ F + + + Sbjct: 351 HSYRDLPLRYFEFGTVYRHEMSGVVHGLLRARGFTQDDAHVFCTRDQVVDEVVAILGLV- 409 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I E+ T + + D + + + Sbjct: 410 ------------------DHIMSTFGFEYEAEISTRPEKSIGTDDMWEHATGALKEACER 451 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ K+ D++ + S ++ FG T Sbjct: 452 HGLSYDINEGDGAFYGPKIDI---KVKDAIGRTWQCSTVQVDFNMPERFG--------LT 500 Query: 302 FKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 ++ D ++ + G++ ++ + G +W V + L Sbjct: 501 YRTEDNTEERPWMLHRAIFGSIERFLGILIEHYAGALPLWLAPVQAAVLPLA------DR 554 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 +A ++ +L+ G V D E + + A A P V++G K + + V ++ Sbjct: 555 HNEAAHELALKLADAGGRVEVYDQNEPMRVKIAKAQSQKIPYMVVLGDKEIENGTVSVRE 614 Query: 421 RLTGIREDMSLEEVINYASH 440 R G +E+++ Sbjct: 615 RHEGDLGAWDVEKLVQTIKD 634 >gi|289432262|ref|YP_003462135.1| prolyl-tRNA synthetase [Dehalococcoides sp. GT] gi|288945982|gb|ADC73679.1| prolyl-tRNA synthetase [Dehalococcoides sp. GT] Length = 569 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 107/252 (42%), Positives = 159/252 (63%), Gaps = 1/252 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F +E P DAE SH+L+LR+GMI Q + G+YS++PL +++ + IIR+E Sbjct: 1 MRYSRLFGKTQREIPSDAETISHQLLLRSGMIAQLTAGVYSFMPLAWRSIQKIENIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ G E+++P LQ ++W +SGR +G+ + L DR D ++ GPTHEEV+TD+ Sbjct: 61 MNKAGCQELAMPVLQPVEIWQQSGREAPFGQTLFHLKDRKDHNLVLGPTHEEVITDLASR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I+SYR+LP YQIQ KFRDE RPR G++R REF+MKD YSFD +PEG SY M + Sbjct: 121 YIQSYRDLPQRLYQIQAKFRDEPRPRGGLIRVREFIMKDMYSFDASPEGLDDSYQTMKQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y ++ R GL+S+ + A+SG IGG SHEF+++A++GE + + +E F Sbjct: 181 YESVYRRCGLESMVIDADSGAIGGKASHEFMIVAESGEDSIIYCPKCS-YAANAEKAVFK 239 Query: 241 DIISLNSIVEQW 252 ++ Sbjct: 240 KKTLPKETLKDL 251 Score = 156 bits (394), Expect = 8e-36, Method: Composition-based stats. Identities = 64/187 (34%), Positives = 97/187 (51%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ + P + S RG+EVGHIF GT S A F A+G H + MG Y Sbjct: 379 ADIALAAEGSACPFCDGTFASKRGVEVGHIFKLGTFLSERFGANFTDAEGVSHPIIMGCY 438 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G+G R++AA IE +HD KGIIWP +AP+++ + + + V R++ EKIY L Sbjct: 439 GMGVGRLLAAAIEQNHDEKGIIWPMPIAPYQVYICGLFLDNPVVRESAEKIYKELEAKSI 498 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V +DD G +F ADLLG PL++ + + + VE K R E + L+ ++ Sbjct: 499 EVLFDDRELTAGVKFNDADLLGIPLRLTISPRNLDKGGVEFKLRRNKESELVPLDSIVER 558 Query: 438 ASHRFSN 444 + Sbjct: 559 VIATIKS 565 >gi|37522455|ref|NP_925832.1| threonyl-tRNA synthetase [Gloeobacter violaceus PCC 7421] gi|73919794|sp|Q7NCU0|SYT_GLOVI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|35213456|dbj|BAC90827.1| threonyl-tRNA synthetase [Gloeobacter violaceus PCC 7421] Length = 627 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 74/442 (16%), Positives = 133/442 (30%), Gaps = 41/442 (9%) Query: 13 ENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVP 72 RD +L L G+ W P G + +R+EQ + G ++ P Sbjct: 217 AKKRDHRKLGRELGLFV-FSDLVGPGLPLWTPKGALLRYILEEFLRKEQVKRGYQQVVTP 275 Query: 73 TLQSADLWVESGRYDSYGKEMLRLADRNDKA-----MIYGPTHEEVMTDIFRSHIKSYRN 127 + DL+ SG + Y +M L +++ + P + I++S + SYR Sbjct: 276 HIARVDLFKTSGHWFKYKDDMFPLMATSEEEGAEEGFVMKPMNCPFHIQIYKSELHSYRE 335 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 LP + +R E G + D +TPE + K+ +F Sbjct: 336 LPIRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDDEFKKVVDLIQFVFRS 395 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 L L GD + D + S + + D+ Sbjct: 396 LQL-------------GDGFSARLSFRDPTSDKYIGSDAAWEKAQAAILKASQDLGLKYF 442 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 + E A Y D D+L ++ ++ + DG Sbjct: 443 VAEGEAAFYGPKLDFI---FRDALGREWQLGTVQVDYILP--------ERFELEYVAEDG 491 Query: 308 KDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 M R +A +IE + Sbjct: 492 SRRRPVMIHRAPFGSLERFIAILIEHFAGDFPLWLAPEQVRILPVT-------DQFVGYA 544 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 E + RL + D E++G + + P+ ++VG + V ++ R+ G Sbjct: 545 ESVKDRLVSLEMRAEVDASSERLGKKIRNGETAKVPVLLVVGESEANSGTVAVRTRVEGE 604 Query: 426 --REDMSLEEVINYASHRFSNN 445 + + +EE I Y R + Sbjct: 605 KDKGTLPVEEAIAYLQERLAKR 626 >gi|83942907|ref|ZP_00955367.1| threonyl-tRNA synthetase [Sulfitobacter sp. EE-36] gi|83845915|gb|EAP83792.1| threonyl-tRNA synthetase [Sulfitobacter sp. EE-36] Length = 649 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 145/442 (32%), Gaps = 45/442 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD ++ L + + + G W G + +R +Q Sbjct: 234 KAHLNMLEEAAKRDHRKLGREMDLY--HMQEEAPGQVFWHANGWLIYTQLQDYMRRKQRA 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 G +E++ P + LW SG ++ Y M + R P + IF Sbjct: 292 GGYVEVNTPQVVDRKLWEASGHWEKYQDHMFIVEVDEEHAREKSVNALKPMNCPCHVQIF 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F D + F + + K Sbjct: 352 NQGLKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCA-EDQIEAETAKF 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 I+ LG ++ ++ P S E D + + Sbjct: 411 IEFLSGIYKDLGFENFSVKFSDRPEKRSGSDE-----------------VWDKAEAALLS 453 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 ++ A Y + L D++ + + ++ F + Sbjct: 454 ATRKAGIEPTLNPGEGAFYGPKLEF---VLTDAIGRDWQCGTHQVD----FVLPER---- 502 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + AT+ G+DG H + +G+ ++ H GK W S+ Sbjct: 503 LDATYIGSDGAKHRPVMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASIT---- 558 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++ A L G D E+I + + P+ + VG++ V + V Sbjct: 559 --SEADDYVHEVVATLKAQGVRADADIRNEKINYKVREHSVGKVPVILAVGAREVEEKTV 616 Query: 417 EIKHRLTGIREDMSLEEVINYA 438 ++ +L +V N Sbjct: 617 SVRRLGEKQTSVQALSDVANAL 638 >gi|38234063|ref|NP_939830.1| prolyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129] gi|81829888|sp|Q6NGM7|SYP_CORDI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|38200325|emb|CAE50010.1| prolyl-tRNA synthetase [Corynebacterium diphtheriae] Length = 585 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 118/386 (30%), Positives = 179/386 (46%), Gaps = 24/386 (6%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G I + + G+Y+WLPLG + L V ++REE Sbjct: 4 RLSTLFLRTLREDPADAEVPSHKLLVRAGYIRRTAPGVYTWLPLGLRTLRKVETVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ P L + + ++ R+ YG + RL DR + GPTHEE+ + Sbjct: 64 DAIGAQELLFPALLPREPYEQTHRWTEYGDSLFRLKDRKGGDYLLGPTHEEMFASAVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSFD++ G + SY + +Y Sbjct: 124 YSSYKDFPVTLYQIQTKYRDEERPRAGILRGREFVMKDSYSFDMSDAGLEDSYQRHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RI RLG++ + A SG +GG S EF+ ++D GE + P + Sbjct: 184 QRILDRLGVEYVICAATSGAMGGSASEEFLAVSDNGEDTFV---RATEGPYAANVEAVVT 240 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + +EQ AP A + N + ++L + + + +E + T L + T Sbjct: 241 QPGVERPLEQ--APEAVEYETPNAETIEALVQWAQSAGVTVEDRSVAAADTLKCLLVKIT 298 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 GA A I D + + + + D Sbjct: 299 ----------------QPGAEEAELAGILLPGDREVDMKRLEASVEPAEVELASEEDFKN 342 Query: 362 RDACEKIY---ARLSKVGCDVFWDDM 384 K Y L+ G V D Sbjct: 343 NPFLVKGYVGPRALNAHGVKVLADPR 368 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 58/187 (31%), Positives = 92/187 (49%), Gaps = 6/187 (3%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 + + D PE + ARGIEVGHIF G KY+ GK MGSY Sbjct: 401 IEAAEIREGDPAPEGQGTLTLARGIEVGHIFQLGRKYTEAFDVQILDESGKRAIPTMGSY 460 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R++A + E HD G+ WP VAP+++ ++ D+ +A + + A L G Sbjct: 461 GIGVSRLMAVLAEQRHDETGLNWPLEVAPYQVHVVVAN-KDKEAIEAGDALVAALDSHGI 519 Query: 378 DVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V +DD G +F A+LLG P V++G + D +E++ R +S +E+++ Sbjct: 520 EVLFDDRPKVSPGVKFKDAELLGMPFVVVLG-RAFKDGNIELRERG-QETVLVSADEIVD 577 Query: 437 YASHRFS 443 + + Sbjct: 578 TVVAKLN 584 >gi|326333619|ref|ZP_08199856.1| proline--tRNA ligase [Nocardioidaceae bacterium Broad-1] gi|325948525|gb|EGD40628.1| proline--tRNA ligase [Nocardioidaceae bacterium Broad-1] Length = 582 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 108/281 (38%), Positives = 158/281 (56%), Gaps = 2/281 (0%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S F+ L+E+P DAE+ASHKL++R G I + + GIYSWLPLG + L V IIREE Sbjct: 1 MSTLFVRTLREDPADAEVASHKLLVRAGYIRRAAPGIYSWLPLGLRVLGKVEQIIREEMA 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G+ E+ P L + + +GR+ YG + RL DR + + GPTHEE+ T + + Sbjct: 61 SIGSQEVHFPALLPREPYEATGRWTEYGDGIFRLKDRKEADYLLGPTHEEMFTLLVKDLY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP + YQIQ K+RDE RPR G++R REF+MKD+YSFD+T EG + +Y +Y+ Sbjct: 121 GSYKDLPLSIYQIQTKYRDEARPRAGLLRGREFIMKDSYSFDVTDEGLEAAYQAHRDAYV 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 R+F RLG + + ++A SG +GG S EF+ +++ GE S + + T + Sbjct: 181 RVFDRLGFEYVIVKATSGAMGGSASEEFLAVSEAGEDTFVRSPGGYAANVEAVTTLAPEP 240 Query: 243 ISLN--SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARG 281 IS P T + L + P + R G Sbjct: 241 ISYEGVPAAHAEDTPETPTIQTLVDHLNKAFPRDDRPWEAG 281 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 96/189 (50%), Gaps = 5/189 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ ARGIE+GH+F G KY+ + +GK V MG Sbjct: 395 GTIEAAEVREGDPAPDGSGPLTLARGIEMGHVFQLGRKYADALGLQVLDENGKLVTVTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R VAA+ E + D G+ WP +VAP+ + L+ D +A + L Sbjct: 455 SYGIGVTRAVAAIAEGTLDEIGLAWPRNVAPYDVHLVATG-KDSAVFEAAATLAEELEAA 513 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV +DD G +F A+L+G P V VG K + + K+E+K R +G + +++L + Sbjct: 514 GIDVLYDDRPKVSPGVKFKDAELIGVPTIVTVG-KGLVEGKIEVKDRKSGEKTEVALADA 572 Query: 435 INYASHRFS 443 + + + + Sbjct: 573 VAHLTEVVA 581 >gi|300813650|ref|ZP_07093972.1| proline--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512192|gb|EFK39370.1| proline--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 570 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 105/275 (38%), Positives = 162/275 (58%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++P L+E+P+DAEI SHK +LR G I + + GIY++L LG + + + I+REE Sbjct: 1 MRLSKLYMPTLREDPQDAEIVSHKFLLRGGFIRKSASGIYTYLTLGYRVVRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ + +Q ++W +SGR++ YG EM +L DR+D+ GPT EE T + + Sbjct: 61 MDRCGSQEILMSAIQPREIWEDSGRWEKYGPEMFKLKDRHDRDFCLGPTAEEYFTTLIKD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP YQIQ K+RDE RPRFG+ R+REF MKDAY+FD EG + SY M+ + Sbjct: 121 EVNSYKDLPLNLYQIQTKYRDEKRPRFGINRAREFSMKDAYTFDEDLEGLEKSYMNMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y ++F RL L + ++G +GG SHEFI LA++GE + S++ + Sbjct: 181 YEKVFDRLSLNYKIVEGDNGAMGGSGSHEFIALAESGEGVIVFSENGKYGATDEKAPVEY 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 E S + + F ++ + + Sbjct: 241 KAPQKEDKKELEKVYTPNCSSIDDVSKFLNIEKGR 275 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 67/173 (38%), Positives = 99/173 (57%), Gaps = 1/173 (0%) Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 ++ ARGIEVG+IF GTKYS ++AT+ +GK Y MGSYGIG R VAA++E ++ Sbjct: 398 DEYKFARGIEVGNIFQLGTKYSKSLNATYLDRNGKAQYFYMGSYGIGITRTVAAIVEQNY 457 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 D GIIWP + AP++ + I +++ ++ EKIY L + G +V DD + G +F Sbjct: 458 DENGIIWPVATAPYECIVTVINPNNEEQKELGEKIYKSLQEKGIEVLIDDRDLRAGVKFK 517 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 DL+G P+++ VG K SD VE R ++S + I A + R Sbjct: 518 DRDLIGIPVRITVGKK-ASDDVVEYSLRKEMKNSEISSQSAIESAIKEVYDGR 569 >gi|99034562|ref|ZP_01314532.1| hypothetical protein Wendoof_01000659 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 339 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 171/358 (47%), Positives = 242/358 (67%), Gaps = 19/358 (5%) Query: 84 GRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDEL 143 GRYD YGKEMLR+ DR+++ M++GPTHEE+ TD+ R +KSY++LP YQIQ KFRDE+ Sbjct: 1 GRYDDYGKEMLRIKDRHEEDMLFGPTHEEIATDLIRDVVKSYKDLPLCLYQIQWKFRDEV 60 Query: 144 RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG 203 RPR+GVMR REFLMKDAYSFD+ EG+ +SYN M+ +Y++IF R+G I +RA++GPIG Sbjct: 61 RPRYGVMRGREFLMKDAYSFDVDYEGALNSYNLMYKTYIKIFKRMGFTPIGVRADTGPIG 120 Query: 204 GDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVH 263 G+LSHEF +LA+TGE+ ++ F + + +E + YA D+H Sbjct: 121 GNLSHEFHILANTGESTLYYDNKFSELLESED-------------IESLKSIYAVADDMH 167 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 + + + + + ++GIE+GHIFYFG KYS PM A+ DGK+ + MGSYGIG R Sbjct: 168 DPE-TCPISQEQLNVSKGIEIGHIFYFGDKYSKPMKASVTSQDGKNVNIHMGSYGIGVSR 226 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 +V A+IE+ HD KGIIWP+ VAPF+I LIN++ +A +KIY L +V +DD Sbjct: 227 LVGAIIEAFHDDKGIIWPEEVAPFRIGLINLQTK---VTEAADKIYKALKSD--EVLYDD 281 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 +G +F+ DL+G P Q+IVG K VS++ VE+K+R TG ++M +EE IN+ S + Sbjct: 282 TEGSVGVKFSRMDLIGLPWQIIVGKKAVSENIVEVKNRATGEVKEMQIEEAINHFSAK 339 >gi|157414515|ref|YP_001481771.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116] gi|172047019|sp|A8FK07|SYT_CAMJ8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157385479|gb|ABV51794.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116] gi|307747157|gb|ADN90427.1| Threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1] gi|315932015|gb|EFV10968.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327] Length = 602 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 150/444 (33%), Gaps = 40/444 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y I + RD +L L T + G+ WL G + + I+ + Sbjct: 194 LKEYLTIIEEAKKRDHRKLGTELKLFT-FDDEIGGGLPIWLSNGARLRSKLEHILYKIHR 252 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P L AD W SG Y +Y + M +++ P + I++S + Sbjct: 253 LRGYEPVRGPELLKADAWKISGHYANYKENM-YFTQIDEQEYGIKPMNCVGHIKIYQSDV 311 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP F++ + R E G+ R REF DA+ F + P K ++ Sbjct: 312 RSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCM-PSQIKEQVLEILAFV 370 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + T + + + + D+ Sbjct: 371 DNLMKLFDFSYEMEI------------------STKPEKAIGDDEIWEVATKALKEALDE 412 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ K+ D+L + ++ F +++ Sbjct: 413 QGLKYGIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVD----FNLPSRF----KLE 461 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +D + + +G+ ++ + + + I + Sbjct: 462 YTDSDNEKKQPVMLHRAILGSFERFIGILTEHC------AGEFPFFIAPTAVGIVPIGEA 515 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ++I L ++ D + E + + A+ P+ +++G V+ V ++ Sbjct: 516 HIAYAKEIQKELLELNIDSEVYEKNESLSKKIRTAEKQKLPMILVLGDDEVAKRSVALRD 575 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R ++++SL+E I + S Sbjct: 576 RRAKEQKNLSLDEFIKLVKEKMSE 599 >gi|170036087|ref|XP_001845897.1| threonyl-tRNA synthetase [Culex quinquefasciatus] gi|167878588|gb|EDS41971.1| threonyl-tRNA synthetase [Culex quinquefasciatus] Length = 699 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 149/442 (33%), Gaps = 50/442 (11%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + IR E + G E+ Sbjct: 294 EEAAKRDHRKLGKEQELF--FFHELSPGSCFFQPKGAHIYNTLMNFIRAEYRKRGFQEVI 351 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + +A LW SG + Y + M + P + IF +S+R LP Sbjct: 352 SPNIYNAKLWQTSGHWQHYAENMFSFESEKET-FALKPMNCPGHCLIFDHRNRSWRELPL 410 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + + + ++ G Sbjct: 411 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCMPDQIREE-ITGCLDFLKHVYGVFG 469 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + P E A+ + D Sbjct: 470 FTFNLV-LSTRPEKYLGEIEVWNDAEK-----------------ALAESLDKFGEPWKEN 511 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + + ++ F ++ + + +G+ Sbjct: 512 PGDGAFYGPKIDI---TIMDALKRAHQCATIQLD----FQLPIRF----NLNYIDDNGEK 560 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + +G++ + A++ + WP ++P +I ++ + + +K+ Sbjct: 561 KRPVIVHRAILGSVERMIAILT---ENYAGKWPFWLSPRQIMVVPVGP---AYDEYADKV 614 Query: 369 YARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 RL G D D G+ + + A L F ++VG K S V ++ R + Sbjct: 615 RLRLHDAGFMAEADLDAGDTMNKKIRNAQLAQFNFILVVGEKERSSETVNVRTRDNKVHG 674 Query: 428 DMSLEEVI--------NYASHR 441 ++S+EE++ + + Sbjct: 675 EVSVEELLVKLRRQADEFIKNE 696 >gi|27904622|ref|NP_777748.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|29839437|sp|P59554|SYT_BUCBP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|27904019|gb|AAO26853.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 643 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 73/432 (16%), Positives = 146/432 (33%), Gaps = 40/432 (9%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD S L L I + G+ W G + +IR + + E+ P + Sbjct: 243 RDHRKISKILDLY--HIQEDLPGMIFWHRNGWIVFQELKKLIRVKLRKYNYQEVKTPVMM 300 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + +W +SG D+Y + M + ++ P + IF ++SYR+LP + Sbjct: 301 NKKIWKDSGHLDNYKESMF-MVCSSNFEYGIKPMNCPGHVQIFNHVVRSYRDLPIRISEF 359 Query: 136 QLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIP 194 R+E G+MR R F DA+ F + N + + Y I+ G K I Sbjct: 360 GSCHRNEPSGALHGLMRIRNFTQDDAHIFCREDQICSEVSNCIRMVYE-IYKIFGFKKIL 418 Query: 195 MRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTA 254 +R + P + + D T + A Sbjct: 419 VRLSTRPKNR-----------------IGNDNIWDKAENDLATSLRESKIEFEYQHGEGA 461 Query: 255 PYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH-YVQ 313 Y ++ LFDSL + + ++ A + + + + Sbjct: 462 FYGPKIEL---SLFDSLGRVWQCATIQLDFCLPINL--------KAFYIDHNNERKVPII 510 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 + +G++ ++ + +P +AP ++ L N+ ++ + +Y Sbjct: 511 VHRAVLGSIERFIGILI---EEYIGNFPTWLAPIQVVLANVNSNH---LQYIKLLYKEFY 564 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G D E I + P +I G K V ++ + ++ R + ++ Sbjct: 565 ALGIRSEIDSRNETISYKIREHIARKIPYIIICGDKEVKNNTITLRTRSGKNFYCIDVQF 624 Query: 434 VINYASHRFSNN 445 I+ ++ Sbjct: 625 FISKLCKEINSY 636 >gi|170077251|ref|YP_001733889.1| threonyl-tRNA synthetase [Synechococcus sp. PCC 7002] gi|169884920|gb|ACA98633.1| threonyl-tRNA synthetase [Synechococcus sp. PCC 7002] Length = 604 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 74/443 (16%), Positives = 136/443 (30%), Gaps = 42/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + +E RD +L L Q G+ W P G + ++ EQ + G Sbjct: 187 YQRRKEEALKRDHRKLGRELGLFM-FSDQVGPGLPLWTPKGTLIRSTLENFLKAEQTKRG 245 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA------MIYGPTHEEVMTDIFR 119 + P + DL+ SG + +Y ++M + D + P + I++ Sbjct: 246 YQGVVTPHIARVDLFKVSGHWQNYREDMFPMMADGDAERAAEQGFVMKPMNCPFHIQIYK 305 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 ++SYR LP + +R E G + D +TP+ + + + Sbjct: 306 DQLRSYRELPIRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLEAEFFNVVD 365 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L +F L LK+ R D + S + + + Sbjct: 366 LILTVFKSLQLKNFKARLS--------------FRDPNSDKYIGSDEVWEKAQNAIRKAV 411 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + E A Y D D L ++ ++ Sbjct: 412 TKLDMDYFEAEGEAAFYGPKLDFI---FQDVLEREWQLGTVQVDYNLP--------ERFE 460 Query: 300 ATFKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + G M R++ +IE + Sbjct: 461 LEYVTEHGDRQRPIMIHRAPFGSLERLIGILIEEYAGDFPLWLAPEQVRILPV------- 513 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D ++ A+L +G D GE++G A+ P+ I G+K V + + Sbjct: 514 SDEFYDYAKEQAAKLQAMGIRAVADASGERLGKLIRNAEKQKIPVMAIAGAKEVEANSLS 573 Query: 418 IKHRLTGIREDMSLEEVINYASH 440 I+ R +G + +EEVI+ Sbjct: 574 IRTRASGELGAIPMEEVISRLIE 596 >gi|223044242|ref|ZP_03614279.1| prolyl-tRNA synthetase [Staphylococcus capitis SK14] gi|222442392|gb|EEE48500.1| prolyl-tRNA synthetase [Staphylococcus capitis SK14] Length = 567 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 110/237 (46%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P ++E P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N++ I+REE Sbjct: 1 MKQSKVFIPTMREVPAEAEALSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNISNIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T + R Sbjct: 61 MESIDAVEILMPALQQAELWEESGRWGAYGPELMRLKDRNGREFALGPTHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ K+RDE RPRFG++R REF+MKDAYSF E +Y M+ + Sbjct: 121 ELKSYKRLPLTLFQIQSKYRDEKRPRFGLLRGREFIMKDAYSFHADEESLDATYQDMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y +IF R+G+ + P+ A+SG IGG+ +HEF+ L++ GE + + D+ E Sbjct: 181 YSKIFKRVGINARPVVADSGAIGGNHTHEFMALSEIGEDTIVY-SNESDYAANIEKA 236 Score = 154 bits (389), Expect = 3e-35, Method: Composition-based stats. Identities = 76/231 (32%), Positives = 118/231 (51%), Gaps = 3/231 (1%) Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENK 275 E +++ D + D +N+ VE + E S K Sbjct: 339 KEIKIYADNYVKDLNNLVIGANEDGYHYVNANVERDFNIDEYGDFRFILEGEMLSDGSGK 398 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E ++D Sbjct: 399 AQFAEGIEVGQVFKLGTKYSEAMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNNDD 458 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 GIIWP SV PF + LI I R+ +++Y +L+ D+ +DD E+ G +F A Sbjct: 459 NGIIWPKSVTPFDLHLITINPKKDDQRELGDQLYDQLNGK-FDILYDDRKERAGVKFNDA 517 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 DL+G P++V+VG + + VE+K RL+G E++ + ++ NY + N + Sbjct: 518 DLIGLPMRVVVGKR-AEEGIVEVKQRLSGESEEIHVNDLENYLKDLYDNLK 567 >gi|152989860|ref|YP_001355582.1| threonyl-tRNA synthetase [Nitratiruptor sp. SB155-2] gi|151421721|dbj|BAF69225.1| threonyl-tRNA synthetase [Nitratiruptor sp. SB155-2] Length = 613 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 70/450 (15%), Positives = 147/450 (32%), Gaps = 46/450 (10%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD ++ L + G+ WLP G + + +++ + G Sbjct: 200 YLTMIEEAKKRDHRKLGSEMELFM-FSEEVGAGLPIWLPKGARLRSKLESLLFAAHRKRG 258 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK-------AMIYGPTHEEVMTDIF 118 + P + +DLW +SG Y +Y + M +D+ P + I+ Sbjct: 259 YEPVRGPEILKSDLWKKSGHYQNYKENMYFTEICDDETKKETCVEYGIKPMNCVGHIMIY 318 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +S +SYR LP F++ + R E G+ R REF DA+ F + + Sbjct: 319 KSKKRSYRELPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCKPEQIKDIVIEVL 378 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 I + ++ + T + + + Sbjct: 379 -------------------GFVDEIMRSFNFKYEMEISTKPKKAIGDDAIWEIATQALKE 419 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D+ I E A Y D+ K+ D++ + ++ F ++ Sbjct: 420 ALDENGHEYGIDEGGGAFYGPKIDI---KITDAIGRKWQCGTIQVD----FNLPERF--- 469 Query: 298 MSATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 F +D V + +G+ ++ + G+ + + + Sbjct: 470 -ELEFTDSDNSAKRPVMIHRAILGSFERFIGILIEHYAGEFPFFIAPTQIIFVPIA---- 524 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 +++ +L ++ D D + + + A+ P+ I+G K V + Sbjct: 525 --DSHVAYAKELQDKLLQMDVDSEIYDSKDSLNKRIRNAEKQKVPMVAIIGDKEVESKSL 582 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNNR 446 I+ R + +++ E + S R Sbjct: 583 AIRDRREKTQYNITESEFFTKIKEKLSEVR 612 >gi|242373554|ref|ZP_04819128.1| prolyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1] gi|242348917|gb|EES40519.1| prolyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1] Length = 567 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 110/237 (46%), Positives = 161/237 (67%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P ++E P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N++ I+REE Sbjct: 1 MKQSKVFIPTMREVPAEAEALSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNISKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T + R Sbjct: 61 MESIDAVEILMPALQQAELWEESGRWGAYGPELMRLKDRNGREFALGPTHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKRLPLTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDATYQDMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R+G+ + P+ A+SG IGG+ +HEF+ L++ GE + + ++ E Sbjct: 181 YSRIFKRVGINARPVVADSGAIGGNHTHEFMALSEIGEDTIVY-SNESEYAANIEKA 236 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 70/175 (40%), Positives = 104/175 (59%), Gaps = 2/175 (1%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 + A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E Sbjct: 395 GSGEAQFAEGIEVGQVFKLGTKYSEAMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQ 454 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 ++D GIIWP SV PF++ LI I R+ ++Y++L+ DV +DD E+ G + Sbjct: 455 NNDENGIIWPKSVTPFELHLITINPKKDEQRELGNQLYSQLNGR-YDVLYDDRQERAGVK 513 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 F ADL+G PL+V+VG + + VE+K RL G ED+ ++++ NY + N + Sbjct: 514 FNDADLIGLPLRVVVGKR-AGEGIVEVKQRLNGESEDVHIDDLENYLKSLYENLK 567 >gi|20071917|gb|AAH27073.1| Pars2 protein [Mus musculus] Length = 397 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 135/419 (32%), Positives = 209/419 (49%), Gaps = 37/419 (8%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 +I S G Y +P +A++ + +I +E G ++++P+L A+LW + R+D G Sbjct: 1 LILPASPGCYHLMPYTVRAVEKLVRVIDQEMQAIGGQKINMPSLSPAELWRATSRWDLMG 60 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMT-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGV 149 +E+LRL DR+ K GPTHEE +T + SY+ LP YQ+ KFRDE RPRFG+ Sbjct: 61 RELLRLRDRHGKEYCLGPTHEEAVTALVASQKKLSYKQLPLLLYQVTRKFRDEPRPRFGL 120 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 +R REF MKD Y+FD + E ++ +Y + +Y R+F RLGL+ + RA+ G IGG +SHE Sbjct: 121 LRGREFYMKDMYTFDSSSEAAQETYGLVCDAYCRLFDRLGLQWMKARADVGSIGGTMSHE 180 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 F + D GE ++ A T + + Sbjct: 181 FQLPVDIGEDRLVVCPSC--------------------------HFSANTEILDLSQKIC 214 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 + +GIEVGH FY TKYS +A F A G+ +MG YG+G R++AA I Sbjct: 215 PDCQGPLTETKGIEVGHTFYLSTKYSSIFNALFTNAHGESLLAEMGCYGLGVTRILAAAI 274 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKA--HDQVCRDACEKIYARLSKV-----GCDVFWD 382 E I WP +AP+++ +I K + + EK+Y + + G +V D Sbjct: 275 EVLSTEDCIRWPRLLAPYQVCVIPPKKGSKETAATEIVEKLYDDIMEAVPQLRG-EVLLD 333 Query: 383 DMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSK-VEIKHRLTGIREDMSLEEVINYAS 439 D IG++ A+ LG+P +I G + + D E+ + TG ++ E V+ + Sbjct: 334 DRTHLTIGNRLKDANKLGYPFVIIAGKRALEDPAHFEVWSQNTGEVVFLTKEGVMELLT 392 >gi|302206413|gb|ADL10755.1| Putative prolyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231] gi|302330969|gb|ADL21163.1| Putative prolyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002] gi|308276656|gb|ADO26555.1| Putative prolyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19] Length = 585 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 106/282 (37%), Positives = 154/282 (54%), Gaps = 5/282 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G I + + G+Y+WLPLG + L + I+REE Sbjct: 4 RLSALFLRTLREDPADAEVPSHKLLVRAGYIRRAAPGVYTWLPLGLRTLKKIENIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ P L + + + R+ YG + RL DR + GPTHEE+ + Sbjct: 64 DGIGAQELLFPALLPREPYQATNRWTEYGDSLFRLKDRKGADYLLGPTHEEMFAGAVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSFD+T +G + SY + +Y Sbjct: 124 YSSYKDFPVTLYQIQTKYRDEERPRAGILRGREFVMKDSYSFDMTDDGLESSYQRHRGAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RI RLG++ A SG +GG S EF+ +++ GE F ++ E Sbjct: 184 QRILDRLGVEYAICSATSGAMGGSASEEFLAISENGE-DTFVRATQGNYAANVEAVVTQ- 241 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 + +E P A D N + DSL + + IE Sbjct: 242 -PGVERSIEGL--PEAKEYDTPNSETIDSLVAWAQNAGITIE 280 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 59/184 (32%), Positives = 87/184 (47%), Gaps = 6/184 (3%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 + + D PE + ARGIEVGHIF G KY+ +GK MGSY Sbjct: 401 IEAAEVREGDPAPEGQGTLTLARGIEVGHIFQLGRKYTEAFDVQILDENGKRAIPTMGSY 460 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R++A + E HD KG+ WP VAPF + ++ D +A + + + L G Sbjct: 461 GIGVSRLMAVLAEQRHDEKGLNWPIEVAPFAVHVVVAN-KDTAAIEAGDALVSELDAAGV 519 Query: 378 DVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V +DD G +F A+LLG P V++G + + KVE++ R ++ E Sbjct: 520 EVLFDDRPKVSPGVKFKDAELLGMPYVVVLG-RSFKEGKVELRVRGE-EAVEIPAAEAAA 577 Query: 437 YASH 440 Sbjct: 578 RIID 581 >gi|311113703|ref|YP_003984925.1| threonine--tRNA ligase [Rothia dentocariosa ATCC 17931] gi|310945197|gb|ADP41491.1| threonine--tRNA ligase [Rothia dentocariosa ATCC 17931] Length = 678 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 70/443 (15%), Positives = 139/443 (31%), Gaps = 32/443 (7%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L + G+ P G + +R Sbjct: 253 EYKHRIAEAERRDHRRLGKELDLFS-FPKNIGPGLPVIHPKGGVIKREMEDYVRARHIAE 311 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G +S P + DL+ SG Y M ++ + + +I+RS +S Sbjct: 312 GFQYVSTPHISKEDLFYTSGHLPYYADGMFPAMVLDNGNYRLKAMNCPMHNEIYRSRGRS 371 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP F++ +RDE G+ R R D++S+ + + L Sbjct: 372 YRELPLRFFEFGTVYRDEKSGVLQGLTRVRMITQDDSHSYVTKEQAPDE-VRHLLNFMLS 430 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + G+ + + GD +FI + + + Sbjct: 431 LLEDFGMTDFYLELSTRDTEGDKKDKFIGTDEQ-----------WEQATAVLEQVAQETG 479 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 A Y + + D++ ++S + FG ++ Sbjct: 480 LELVPDPGGAAFYGPKI---SVQAKDAIGRTWQMSTVQYDFNQPSRFG--------LEYQ 528 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 ADG + S G++ V+ + +P ++P ++ + + + Sbjct: 529 AADGSIQEPVMIHSAKFGSIERFLGVLT---EHYAGAFPAWLSPVQVICVPVA---EAFN 582 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D +I +L + G V D ++ + A P +I G + V + R Sbjct: 583 DYMTEIADKLREQGVRVEVDYGSDRFTKKIRTASTEKVPFILIAGGEDAEAGAVSFRFRG 642 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + ++E + N Sbjct: 643 NKQENGVPVDEAVARIVEHIRNR 665 >gi|89053589|ref|YP_509040.1| threonyl-tRNA synthetase [Jannaschia sp. CCS1] gi|88863138|gb|ABD54015.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Jannaschia sp. CCS1] Length = 648 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 75/433 (17%), Positives = 144/433 (33%), Gaps = 44/433 (10%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 KY + + RD ++ L + + + G W P G + +R +Q Sbjct: 235 KYLNFLEEAEKRDHRRLGREMDLY--HMQEEAPGQVFWHPNGWTIYTTLQDYMRRKQRAD 292 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIY-----GPTHEEVMTDIFR 119 G +E++ P + LW +SG +D Y + M + + A P + ++F Sbjct: 293 GYVEVNTPQVVDRALWEKSGHWDKYQEHMFIVEVDEEHAQTKAINALKPMNCPCHVEVFN 352 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 +KSYR+LP + R E G+MR R F DA+ F T + + K Sbjct: 353 QGLKSYRDLPLRMAEFGSCSRYEPSGALHGIMRVRGFTQDDAHIFC-TEDQIEAECAKFI 411 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 ++ LG +S + + P + E D + Sbjct: 412 TFLSGVYKDLGFESFDIAFATRPEKRVGTDE-----------------AWDHVEGALEAA 454 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + + I E A Y D + L D++ + ++ G Sbjct: 455 IKSVGNPYRIEEGDGAFYGPKLDFY---LTDAIGRVWQCGTFQVDPNLPERLG------- 504 Query: 299 SATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 A++ G DG H + +G+ ++ + +G+ W S++ Sbjct: 505 -ASYVGQDGDKHRPYMLHRACLGSFERFIGILIENSEGRLPFWLAPRQVVVASIV----- 558 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + ++ A L G D E+I + + P + +G + V + V Sbjct: 559 -SDADEFVHEVVAALKATGIRAEADTRNEKINYKVREHSVGKVPAILAIGKQEVENRTVT 617 Query: 418 IKHRLTGIREDMS 430 ++ + Sbjct: 618 LRRLGEKQTRVVP 630 >gi|326771743|ref|ZP_08231028.1| proline--tRNA ligase [Actinomyces viscosus C505] gi|326637876|gb|EGE38777.1| proline--tRNA ligase [Actinomyces viscosus C505] Length = 610 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 99/284 (34%), Positives = 150/284 (52%), Gaps = 2/284 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S F+ L+E+P DAE+ASH+L++R + + + G+Y+WLPLG + L + I+R+E Sbjct: 4 RLSTSFIRTLREDPADAEVASHRLLVRACYVRRAAPGVYTWLPLGLRTLRKIEDIVRQEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ P L A+ + +GR+D YG + +L DR D + PTHEE+ T + Sbjct: 64 DAMGGQEVHFPALLPAEPYQATGRWDDYGPTLFKLRDRKDGDYLLAPTHEEMFTLAVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G +Y +Y Sbjct: 124 YSSYKDLPAVVYQIQTKYRDEARPRAGIIRGREFVMKDSYSFDIDDAGLAAAYQAHRDTY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF RLGL + + A +G +GG S EF+ + GE S + T + Sbjct: 184 ERIFTRLGLDYVIVNAMAGAMGGSHSEEFLHPCEIGEDTFVRSSSGYAANAEAVTTVVPE 243 Query: 242 IISLNSIVEQWTA--PYAATSDVHNEKLFDSLPENKRVSARGIE 283 + + I P T D E + P + + + Sbjct: 244 PVDASGIGPARVVDTPDTPTIDSLVELCNRAYPRSDGRAWTAAD 287 Score = 147 bits (372), Expect = 3e-33, Method: Composition-based stats. Identities = 68/189 (35%), Positives = 96/189 (50%), Gaps = 4/189 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ ARGIE+GHIF G KYS + T +GK V MG Sbjct: 415 GTIEAAEVREGDPAPDGSGPLHLARGIEIGHIFELGRKYSQALGLTVLDENGKARVVTMG 474 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG RV+AA+ E++HD KG+ WP +AP+ + ++ DQ D E+I + L Sbjct: 475 SYGIGVSRVMAALAEANHDDKGLTWPAQIAPYHVQVLATG-KDQAVFDVAEQIASSLDAD 533 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD G +FA A+LLG P ++VG + VEI+ R TG R + + Sbjct: 534 GVEVLYDDRRKVSAGVKFADAELLGLPYTLVVGRDLAKEGTVEIRDRRTGERRSVPADAA 593 Query: 435 INYASHRFS 443 S Sbjct: 594 AAELSTTVR 602 >gi|282883093|ref|ZP_06291693.1| proline--tRNA ligase [Peptoniphilus lacrimalis 315-B] gi|281297070|gb|EFA89566.1| proline--tRNA ligase [Peptoniphilus lacrimalis 315-B] Length = 570 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 105/275 (38%), Positives = 162/275 (58%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++P L+E+P+DAEI SHK +LR G I + + GIY++L LG + + + I+REE Sbjct: 1 MRLSKLYMPTLREDPQDAEIVSHKFLLRGGFIRKSASGIYTYLTLGYRVVRKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G+ E+ + +Q ++W +SGR++ YG EM +L DR+D+ GPT EE T + + Sbjct: 61 MDRCGSQEILMSAIQPREIWEDSGRWEKYGPEMFKLKDRHDRDFCLGPTAEEYFTTLIKD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++LP YQIQ K+RDE RPRFG+ R+REF MKDAY+FD EG + SY M+ + Sbjct: 121 EVNSYKDLPLNLYQIQTKYRDEKRPRFGINRAREFSMKDAYTFDEDLEGLEKSYMNMYRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y ++F RL L + ++G +GG SHEFI LA++GE + S++ + Sbjct: 181 YEKVFDRLSLNYKIVEGDNGAMGGSGSHEFIALAESGEGVIVFSENGKYGATDEKAPVEY 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 E S + + F ++ + + Sbjct: 241 KAPQKEDKKELEKVYTPNCSSIDDVSKFLNIEKGR 275 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 67/173 (38%), Positives = 99/173 (57%), Gaps = 1/173 (0%) Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 ++ ARGIEVG+IF GTKYS ++AT+ +GK Y MGSYGIG R VAA++E ++ Sbjct: 398 DEYKFARGIEVGNIFQLGTKYSKSLNATYLDRNGKAQYFYMGSYGIGITRTVAAIVEQNY 457 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 D GIIWP + AP++ + I +++ ++ EKIY L + G +V DD + G +F Sbjct: 458 DENGIIWPVATAPYECIVTVINPNNEEQKELGEKIYKSLQEKGIEVLIDDRDLRAGVKFK 517 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 DL+G P+++ VG K SD VE R ++S + I A + R Sbjct: 518 DRDLIGIPVRITVGKK-ASDDVVEYSLRKEMKNSEISSQSAIESAIKEVYDGR 569 >gi|256396855|ref|YP_003118419.1| prolyl-tRNA synthetase [Catenulispora acidiphila DSM 44928] gi|256363081|gb|ACU76578.1| prolyl-tRNA synthetase [Catenulispora acidiphila DSM 44928] Length = 582 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 111/237 (46%), Positives = 152/237 (64%), Gaps = 1/237 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G + + + GIYSWLPLG++ L+NV ++REE Sbjct: 4 RMSSLFLRTLREDPADAEVPSHKLLVRGGYVRRVAPGIYSWLPLGKQVLENVTRVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 +R G E+ P L + + +GR+ YG + RL DR + GPTHEE+ TD+ +S Sbjct: 64 DRMGGQEVQFPALLPREYYEATGRWTEYGDNLFRLQDRRGNDYLLGPTHEEMFTDMVKSE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SY++LP T YQIQ K+RDE RPR G++R REFLMKD+YSFDL +G KHSY + +Y Sbjct: 124 VSSYKDLPVTLYQIQTKYRDEARPRAGILRGREFLMKDSYSFDLDDDGLKHSYAEHRDTY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGET-QVFCSKDFMDFPIPSENT 237 +RIF RLG+K + A SG +GG S EF+ A TGE V C + + T Sbjct: 184 IRIFDRLGIKYKIVSAVSGAMGGSASEEFLATAPTGEDTYVACHNCGYAANVEAVET 240 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 6/200 (3%) Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSA 300 + V T + + D P + RGIE+GHIF G KY+ Sbjct: 379 KHVAYAVAGRDFDIEGTVEAAEVRAGDVCPRCAHELSIDRGIEIGHIFQLGRKYADAAKL 438 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G DGK V MGSYG+G R VA + E HD G++WP VAP + ++ D Sbjct: 439 DVLGKDGKPVRVTMGSYGVGVSRAVAVLAEQLHDELGLVWPREVAPADVHIVAAG-KDPA 497 Query: 361 CRDACEKIYARLSKVGCDVFWDDM--GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + + L G V +DD G +F A+L+G P V+VG + ++D VE+ Sbjct: 498 IYETANRYAEELGARGVRVLYDDRVGSVSPGVKFKDAELIGVPTIVVVG-RNLADGVVEV 556 Query: 419 KHRLTGIREDMSLEEVINYA 438 + R TG + ++++ +++ + Sbjct: 557 RDRQTGEKAEVAVPDLVEHV 576 >gi|84498663|ref|ZP_00997420.1| prolyl-tRNA synthetase [Janibacter sp. HTCC2649] gi|84381060|gb|EAP96946.1| prolyl-tRNA synthetase [Janibacter sp. HTCC2649] Length = 593 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 103/271 (38%), Positives = 156/271 (57%), Gaps = 5/271 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S FL L+E+P DAE+ H+L++R G + + + GIY+WLPLG + L V AI+REE Sbjct: 1 MRMSSLFLRTLREDPVDAELPGHRLLVRAGYVRRAAPGIYTWLPLGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E++ P L + + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 61 MDAIGAQELTFPALLPREPYEATNRWTEYGDNIFRLKDRKGGDYLLGPTHEEMFTLAVKD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP + YQIQ K+RDE RPR G++R REF+MKD+YSFD++ EG + SY + Sbjct: 121 MFSSYKDLPLSLYQIQNKYRDEARPRAGLLRGREFVMKDSYSFDVSDEGLEASYQAHRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF RLG + + + A SG +GG S EF+ ++ GE + + E Sbjct: 181 YIKIFDRLGFEYVIVSAMSGAMGGSASEEFLAVSAIGEDTFVRNDAGT-YAANVEAV--- 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 +++ + V+ P A D + D+L Sbjct: 237 -VVTQAAPVDASGVPAAHVEDTPDTPTIDTL 266 Score = 151 bits (381), Expect = 3e-34, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 95/195 (48%), Gaps = 7/195 (3%) Query: 258 ATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + D P+ V RGIE+GHIF G K++ + +GK V MG Sbjct: 399 GTIQAAVVRDGDPSPDGNGVLHTARGIEMGHIFQLGRKFAEALDLKVLDENGKLVTVTMG 458 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH---DQVCRDACEKIYARL 372 SYG+G R VAA+ E + D G+IWP +V P + ++ + D ++I A L Sbjct: 459 SYGVGVSRAVAAIAEDNLDDLGLIWPRAVTPADVHVVATGKNRDRDGDVFAKADEITASL 518 Query: 373 SKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 G V +DD G +F ++L+G P V+VG K + + +EIK R +G R ++++ Sbjct: 519 EAQGISVLYDDREKVSPGVKFKDSELIGIPTIVVVG-KSLENGVIEIKDRRSGERREVAV 577 Query: 432 EEVINYASHRFSNNR 446 + VI+ R Sbjct: 578 DSVIDEVLAEVRGGR 592 >gi|119953497|ref|YP_945706.1| threonyl-tRNA synthetase [Borrelia turicatae 91E135] gi|254783510|sp|A1R0E4|SYT_BORT9 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|119862268|gb|AAX18036.1| threonyl-tRNA synthetase [Borrelia turicatae 91E135] Length = 583 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 81/448 (18%), Positives = 163/448 (36%), Gaps = 39/448 (8%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L + +E R D +L L + + G+ + P G + + REE + Sbjct: 172 KAYLKLREEIKRRDHRKLGRELDLFSVH-EEIGPGLIFFHPSGARIRALIEDFWREEHFK 230 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + LW SG D Y + M + + P + I+ + Sbjct: 231 NGYDILFTPHVGKSWLWETSGHLDFYKESMFEKMEMDKSNYYVKPMNCPFHIAIYNTGRH 290 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LPF + ++ +R E G MR R F DA+ T + K ++ L Sbjct: 291 SYRDLPFRWAELGTVYRYEKVGALHGTMRVRGFTQDDAHIIC-TYDQVKFEVQEVLRFAL 349 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++++ G ++ + P + +++ + ++ Sbjct: 350 YMWNKFGFTALKAYLSTKPEKSVGDEDDWIMS-----------------VKVLKEALINL 392 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I E A Y D+ K+ DSL ++S + F ++ + +A Sbjct: 393 GIDYDIDEGGGAFYGPKIDL---KIIDSLGREWQMSTIQFD----FNLPARFKMTYTAE- 444 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ ++ + G +W + I + NI Sbjct: 445 --DGKERQPFMIHRALLGSIERFFGILVEHYGGAFPVWLAPLQVVIIPVNNI------VE 496 Query: 363 DACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + ++ +R K G + D D ++ ++ P IVG K V + K+ I+ R Sbjct: 497 EYALEVLSRFKKEGIRIKLDNDCNMRMNAKIRQYQSQKVPYMFIVGEKEVVEGKISIRTR 556 Query: 422 LTGIREDMSLEEVINYASHRFSNNRPVL 449 + L+E + + + SN + +L Sbjct: 557 TNEQINGLELKEALEFVKLKVSN-KEIL 583 >gi|219684484|ref|ZP_03539428.1| threonyl-tRNA synthetase [Borrelia garinii PBr] gi|219672473|gb|EED29526.1| threonyl-tRNA synthetase [Borrelia garinii PBr] Length = 593 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 69/443 (15%), Positives = 150/443 (33%), Gaps = 37/443 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L + +E RD +L L + + G+ + P G K + REE ++ Sbjct: 184 RSYLNLREEIKKRDHRKLGKELDLFSIH-EEIGPGLIFFHPNGAKIRALIEDFWREEHSK 242 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + LW SG D Y M + + P + I+ + Sbjct: 243 NGYDILFTPHVGKSWLWQTSGHLDFYKDSMFEKIEMDKSDYYLKPMNCPFHIAIYNTGKH 302 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LPF + ++ +R E G+MR+R F DA+ + ++ + Sbjct: 303 SYRDLPFRWAELGTVYRYEKIGALHGMMRARGFTQDDAHIICTHSQVVDE-IKEVLRFAI 361 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ + G S+ + P + + + + + Sbjct: 362 YMWSKFGFSSLKAYLSTKP-----------------DKSVGNDYDWEMSLKVLEEALSNF 404 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I + A Y D+ K+ DSL ++S + F ++++ +A Sbjct: 405 EVPYEIDKGGGAFYGPKIDL---KIVDSLEREWQMSTIQFD----FNLPERFNMTYTAE- 456 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ ++ + G +W I + Sbjct: 457 --DGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPLW------LSPVQAVIIPVNNTVE 508 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D K+ + G + D+ ++ ++ P I+G + + K+ I+ R Sbjct: 509 DYTIKVLNKFKNAGIRIKLDNSSSRMNAKIREYQAKKIPYMFIIGEREAIEEKISIRTRT 568 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L+E + + + Sbjct: 569 NEQINGIELDEALKLILLKVRDK 591 >gi|290980243|ref|XP_002672842.1| predicted protein [Naegleria gruberi] gi|284086421|gb|EFC40098.1| predicted protein [Naegleria gruberi] Length = 720 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 75/449 (16%), Positives = 156/449 (34%), Gaps = 47/449 (10%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 I + RD + + K L H++S G +LP G + + + IR+E + G E+ Sbjct: 307 IEEALKRDHRLIAKKQDLF--FFHEYSPGTPFFLPHGTRLFNKLVEFIRKEYRKRGYDEV 364 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRL---ADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 P + +LW SG + Y +M + ++ + P + +F S I+SYR Sbjct: 365 ITPQMFQKELWETSGHWQHYKDDMFTVIEGTQHKEETIGIKPMNCPAHCLMFDSKIRSYR 424 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP R+E R G+ R R F D++ F + ++ Sbjct: 425 ELPVRLADFSPLHRNEPRGSLTGLTRVRRFHQDDSHIFCTHDQVKSE-IENCLQFVKFVY 483 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + ++ + P E D S D Sbjct: 484 SEIFGFNLRFNLSTRPEKFVGDIE-----------------MWDKAEQSLKECLD--GYN 524 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + E A Y D+ E DSL + + ++ F +++L + Sbjct: 525 WKLNEGDGAFYGPKIDIQIE---DSLQRFHQCATIQLD----FQLPRRFNLKYQSQ---N 574 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 D V + +G++ A++ + WP + P + + + A + D C Sbjct: 575 DQLITPVIIHRAILGSIERFIALLT---EHLSGRWPFWLNPRQCFICPVSAENASLVDYC 631 Query: 366 EKIYARLSK--------VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 +++ ++ K + D + + + A +L + +++G K + + V Sbjct: 632 KEVKDQIFKTAEERGVFSNYFIDVDLSDKTMKKKIRDAQVLQYNFILVLGEKEMQEKTVS 691 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNNR 446 ++ R + M ++ +++ + Sbjct: 692 VRKRDGTLVGTMKIDALLSMWEELLRTYQ 720 >gi|312143811|ref|YP_003995257.1| threonyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus'] gi|311904462|gb|ADQ14903.1| threonyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus'] Length = 652 Score = 221 bits (564), Expect = 2e-55, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 152/445 (34%), Gaps = 35/445 (7%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 KY + RD +L L + + +G+ P G K + + + +E+ + Sbjct: 231 KYLERREEAKKRDHNKLGRELDLFMT-VDEIGQGLPLLKPKGAKVVQILQRFVEDEEEKR 289 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHI 122 G P + +DL+ SG ++ Y M +++D M P I+ S + Sbjct: 290 GYQITKTPFMAKSDLYEISGHWEHYKDGMFILGDEEKDDNLMALRPMTCPFQFQIYNSKL 349 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP + + FR+E G++R R+F + + + TPE + + + Sbjct: 350 RSYRDLPIRYSETSSLFRNEASGEMHGLIRLRQFTISEGHLIV-TPEQLEEEFRGVIDLI 408 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + +G I D+ + F + + + + T D+ Sbjct: 409 NYMMESIG------------IEDDIWYRFSKWDPENKDKYIDNPEAWKDSQAKMKTILDN 456 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + A Y D+ + + + + I+ F ++ + T Sbjct: 457 LDMEYEEADGEAAFYGPKLDIQFKNVH---GKEDTIITVQID----FALPERFDM----T 505 Query: 302 FKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + + + + + IG A++ + G W V I + Sbjct: 506 YIDENNEKQHPIVIHRTSIGCYERTLAMLIEKYAGAFPTWLAPVQAKIIPV------SDD 559 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +I L V D E++G + A + P +IVGS+ + V ++ Sbjct: 560 QLDYAYQIKKELEADDIRVEVDARTEKVGYKIREAQVEQVPYMLIVGSREEENGSVSVRE 619 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R G L E N Sbjct: 620 RREGDLGTSPLAEFKERILAEIENK 644 >gi|257791654|ref|YP_003182260.1| threonyl-tRNA synthetase [Eggerthella lenta DSM 2243] gi|257475551|gb|ACV55871.1| threonyl-tRNA synthetase [Eggerthella lenta DSM 2243] Length = 637 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 75/443 (16%), Positives = 147/443 (33%), Gaps = 47/443 (10%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E RD +L + T M G+ +LP G + + + +R + G Sbjct: 229 LRNLEEAEKRDHRKLGRELGIYT-MDPLAGVGLPMYLPKGARVIRTMQEWLRRDLYERGY 287 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEML-------RLADRNDKAMIYGPTHEEVMTDIFR 119 E+ P + +AD+W SG Y Y + M D P + +++ Sbjct: 288 EEVITPHVYNADVWKTSGHYGFYKENMYFFNINEGTDEDPRLTEYAVKPMNCPGHVMLYK 347 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 S + SYR+LP +++ +R E+ G++R+R F DA+ F + Sbjct: 348 SELHSYRDLPLRYFEFGTVYRHEMSGVVHGLLRARGFTQDDAHVFCTRDQVVDEVVAI-L 406 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 I G + T + + D + + Sbjct: 407 DLVDHIMSTFGFQYE------------------AEISTRPEKSIGTDDMWEHATNALKEA 448 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 I E A Y D+ K+ D++ + S ++ Sbjct: 449 CARHELAYDINEGDGAFYGPKIDI---KVKDAIGRTWQCSTVQVDFNMP--------ERF 497 Query: 299 SATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T++ D ++ + G++ ++ + G +W V + L Sbjct: 498 ELTYRTEDNTEERPWMLHRAIFGSIERFLGILIEHYAGALPLWLAPVQVAVLPLA----- 552 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 +A ++ +L G + D E + + A A P V++G K + + V Sbjct: 553 -DRHNEAAAELAKQLKAAGGRIEVYDQNEPMRVKIAKAQSQKIPYMVVLGDKEIENGTVS 611 Query: 418 IKHRLTGIREDMSLEEVINYASH 440 ++ R G +E+++ Sbjct: 612 VRERHEGDLGAWPVEQLVEKLRE 634 >gi|262038762|ref|ZP_06012119.1| threonine--tRNA ligase [Leptotrichia goodfellowii F0264] gi|261747220|gb|EEY34702.1| threonine--tRNA ligase [Leptotrichia goodfellowii F0264] Length = 636 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 82/439 (18%), Positives = 169/439 (38%), Gaps = 43/439 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E R D ++ L + +H G ++P G + ++ + I R+E + Sbjct: 230 YLTMLEEAERRDHRKLGKQMDLF--FLDEHGPGFPFFMPKGMELMNKLQEIWRKEHKKRK 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + +LW SG + +Y + M ++ ++K P + +++++ SY Sbjct: 288 YEEIRTPVMLDKELWEISGHWFNYRENMYT-SEIDEKVYAIKPMNCPGSIIAYKNNLHSY 346 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 ++LP + ++ L R E G+MR R F DA+ F T E + ++ Y + Sbjct: 347 KDLPLKYGEMGLVHRHEFSGALHGLMRVRAFTQDDAHVFC-TKEQIEEQIIEIIDLYDKF 405 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + P S E +A+ + + Sbjct: 406 YTLFGFDYNI-ELSTKPEKAIGSDEIWAVAEA-----------------DLASALEKKGI 447 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y D K+ DS+ + ++ F ++ ++ G Sbjct: 448 KYKLNPGDGAFYGPKIDF---KMRDSIGRIWQCGTIQLD----FNLPARF----EMSYIG 496 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ H + G+M ++ + G W I + Sbjct: 497 ADGEKHEPVMIHRAMYGSMERFIGILIEHYAGAFPTW------LAPVQARILTISKEQVP 550 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD-LLGFPLQVIVGSKFVSDSKVEIKHRL 422 EK+Y L + G V D E+IG + A+ P+Q+I+G V +++V ++ Sbjct: 551 FAEKLYEELQEAGIRVDIDTRDEKIGYKIREANGDQKIPVQLIIGKNEVENNEVNVRRFG 610 Query: 423 TGIREDMSLEEVINYASHR 441 + +++S++E+++ Sbjct: 611 SQDSQNVSVKEIVDMLLEE 629 >gi|29376876|ref|NP_816030.1| prolyl-tRNA synthetase [Enterococcus faecalis V583] gi|227519897|ref|ZP_03949946.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0104] gi|81838863|sp|Q831W7|SYP_ENTFA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|118138617|pdb|2J3L|A Chain A, Prolyl-Trna Synthetase From Enterococcus Faecalis Complexed With A Prolyl-Adenylate Analogue ('5'-O-(N-(L-Prolyl)- Sulfamoyl)adenosine) gi|118138618|pdb|2J3L|B Chain B, Prolyl-Trna Synthetase From Enterococcus Faecalis Complexed With A Prolyl-Adenylate Analogue ('5'-O-(N-(L-Prolyl)- Sulfamoyl)adenosine) gi|118138619|pdb|2J3M|A Chain A, Prolyl-Trna Synthetase From Enterococcus Faecalis Complexed With Atp, Manganese And Prolinol gi|118138620|pdb|2J3M|B Chain B, Prolyl-Trna Synthetase From Enterococcus Faecalis Complexed With Atp, Manganese And Prolinol gi|29344341|gb|AAO82100.1| prolyl-tRNA synthetase [Enterococcus faecalis V583] gi|227072691|gb|EEI10654.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0104] Length = 572 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 105/235 (44%), Positives = 145/235 (61%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+++LR G I Q + GIYS+LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAAGIYSYLPLANRVLEKLKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P L A+LW ESGRY++YG + RL DRND+ I GPTHEE T++ R Sbjct: 61 FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEETFTELIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RDE R R G++R REF+MKD YSF SY + Sbjct: 121 EINSYKRLPLNLYQIQTKYRDEKRSRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF R GL+ + + G +GG S EF+ +++ GE + C D+ E Sbjct: 181 YSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTI-CYSTESDYAANLE 234 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 65/187 (34%), Positives = 107/187 (57%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ + D P+ V +GIE+GHIF GT+YS M AT +G++ V MG Y Sbjct: 382 EDLRFVQEGDPSPDGNGVLAFTKGIEIGHIFKLGTRYSDAMGATVLDENGREKSVIMGCY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E + D +GI WP +APF + ++ + D+ +++ A +++ G Sbjct: 442 GIGVSRLLSAIVEQNADERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGY 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V DD E+ G +FA ADL+G P+++ VG K V D VE+K + TG ++ EE+ + Sbjct: 502 EVLVDDRNERAGVKFADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEELEST 560 Query: 438 ASHRFSN 444 S + Sbjct: 561 LSILMNT 567 >gi|70726652|ref|YP_253566.1| prolyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435] gi|114152257|sp|Q4L5W5|SYP_STAHJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|68447376|dbj|BAE04960.1| proline-tRNA ligase [Staphylococcus haemolyticus JCSC1435] Length = 566 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 120/294 (40%), Positives = 180/294 (61%), Gaps = 5/294 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P ++ P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N++ IIREE Sbjct: 1 MKQSKVFIPTRRDVPAEAEALSHQLLLKAGLIKQSTSGIYSYLPLASRVLNNISKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T I R Sbjct: 61 MESIDAVEILMPALQQAELWEESGRWGAYGPELMRLKDRNGREFALGPTHEEVVTSIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPLTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDETYQDMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--- 237 Y RIF R+G+ + P+ A+SG IGG+ +HEF+ L++ GE + S+ D+ E Sbjct: 181 YDRIFKRVGINARPVVADSGAIGGNHTHEFMALSEIGEDTIVYSEH-SDYAANIEKAEVV 239 Query: 238 -DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 ++ + + +E+ P T+ + L + E + I+ I + Sbjct: 240 YHPNEKHTEVAELEKVETPNVKTAQELADFLNRPVDEIVKSMIFKIDGEFIMFL 293 Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats. Identities = 71/180 (39%), Positives = 105/180 (58%), Gaps = 4/180 (2%) Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRV 324 E L D E K A GIEVG +F GTKYS M+ATF GK + MG YGIG R Sbjct: 390 ETLSDGSGEAK--FAEGIEVGQVFKLGTKYSEAMNATFLDNQGKAKPLIMGCYGIGVSRT 447 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 ++A++E ++D GIIWP SV PF + LI I + +++Y L + DV +DD Sbjct: 448 LSAIVEQNNDENGIIWPKSVTPFDLHLITINPKKDEQLELGDQLYKELQQQ-YDVLYDDR 506 Query: 385 GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 ++ G +F ADL+G P++++VG K S+ VE+K R TG E++ + ++ + + +SN Sbjct: 507 KDRAGVKFNDADLIGLPIRIVVG-KNASEGIVEVKVRQTGESEEVHINDLNTHIATLYSN 565 >gi|270009374|gb|EFA05822.1| hypothetical protein TcasGA2_TC008604 [Tribolium castaneum] Length = 685 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 76/432 (17%), Positives = 148/432 (34%), Gaps = 42/432 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD L H+ S G + P G + + I++E + G E+ Sbjct: 280 EEAAKRDHRKIGRDQELF--FFHELSPGSCFFQPRGAHIYNTLINFIKKEYRKRGFQEVI 337 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + +A LW SG + Y M D P + IF + +S+R LP Sbjct: 338 SPNIFNAKLWQVSGHWAHYADNMFSF-DVEKDKFALKPMNCPGHCLIFDNRTRSWRELPL 396 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + ++ G Sbjct: 397 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCALEHIKQE-IKGALDFLSHVYSVFG 455 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 F V+ T + + + + DD + S+ Sbjct: 456 FT------------------FNVVLSTRPEKYLGDLAMWEQAEKALSEGLDDFGAPWSVN 497 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + ++ F ++ + ++ G+ Sbjct: 498 PGDGAFYGPKIDI---TVHDALKRAHQCGTIQLD----FQLPIRF----NLSYVSESGEK 546 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + +G++ + A++ + G WP ++P + +I + + + + Sbjct: 547 KRPVIIHRAILGSVERMIAILT---ESCGGKWPFWISPRQAMVIPVGP---TYDEYAQDV 600 Query: 369 YARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +L + G D D G+ + + A L F ++VG K S V ++ R + Sbjct: 601 KKKLYEAGFMAEVDTDAGDTMNKKIRNAQLAQFNFILVVGEKERSSQTVNVRTRDNIVHG 660 Query: 428 DMSLEEVINYAS 439 ++S+E +I Sbjct: 661 EISVEGLIEKFK 672 >gi|323446287|gb|EGB02506.1| hypothetical protein AURANDRAFT_59726 [Aureococcus anophagefferens] Length = 452 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 75/435 (17%), Positives = 156/435 (35%), Gaps = 38/435 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKG-IYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + + RD + KL L + I + + G + W P G + + + R G Sbjct: 22 RLEEAKKRDHRVLGKKLDLFS--IQEAAGGGLCFWHPRGARIRMLMEDTWKAAHERGGYE 79 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 + P + + DLW SG +D Y + M D + P + +++ ++SYR+ Sbjct: 80 LLVTPHIANVDLWKTSGHFDFYAEGMFDQMDVEKEQYQLKPMNCPFHCLVYKDQLRSYRD 139 Query: 128 LPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LPF + ++ +R E G+MR R F DA+ F + + I Sbjct: 140 LPFRWAELGTVYRYERSGTLQGLMRVRGFTQDDAHIFCTPEQLEDEIVA-VLELTEEILS 198 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 + G + + P + S + + D + Sbjct: 199 KFGFDDYELMLSTRP-----------------DKAVGSDEIWTKATAALKGALDRKGWDH 241 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 + E A Y D+ K+ D+L + S + F ++ L A + Sbjct: 242 GVDEGGGAFYGPKIDL---KIKDALGRQWQCSTVQCD----FNLPERFELEYRAA---SG 291 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + + + G++ A++ + G P +AP ++ L+ + RD + Sbjct: 292 QAERPIMVHRAIFGSLERFFAILL---ESCGGDLPLWLAPTQMRLLPVT---DDARDFSK 345 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + A+ ++ G D +++ Q A+ P+ +VG K ++ + ++ R G Sbjct: 346 AVAAKAAQRGIRCEIDSGKDRLNKQIRNAETQRVPIMCVVGEKEMASGDLAVRARTMGDL 405 Query: 427 EDMSLEEVINYASHR 441 + ++ + + Sbjct: 406 GTIDVDALFDELKDL 420 >gi|227503402|ref|ZP_03933451.1| prolyl-tRNA synthetase [Corynebacterium accolens ATCC 49725] gi|227075905|gb|EEI13868.1| prolyl-tRNA synthetase [Corynebacterium accolens ATCC 49725] Length = 594 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 106/282 (37%), Positives = 159/282 (56%), Gaps = 7/282 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+E+P DAE+ SHKL++R G + + + GIY+WLPLG +AL + ++R+E Sbjct: 9 RLSELFLRTLREDPADAEVPSHKLLVRAGYVRRVAPGIYTWLPLGLRALRKIEDVVRQEM 68 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G EM P L + + ++ R+ YG + RL DR + ++ GPTHEE+ + + Sbjct: 69 DAIGGQEMLFPALLPREPYEKTNRWVEYGPNLFRLQDRKNADLLLGPTHEEMFANAVKDM 128 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR GV+R REF+MKD+YSFD+ EG SY + +Y Sbjct: 129 YSSYKDFPVTLYQIQTKYRDEERPRAGVLRGREFVMKDSYSFDMNDEGLDSSYARHRKAY 188 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF-- 239 +F RL + +A SG +GG S EF+ L++ GE +F D+ E Sbjct: 189 QNVFDRLEIDYAICKATSGAMGGSASEEFLALSEVGE-DLFVRSTEGDYAANVEAVVTQA 247 Query: 240 --DDIISLNSIVEQWTAPYAATSD--VHNEKLFDSLPENKRV 277 + I+ +++ P AAT + VH K D + V Sbjct: 248 PPEKDIAGQPAAKEYRTPDAATIEALVHWAKTEDIAVDGHEV 289 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 6/199 (3%) Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPE--NKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 V + K D P+ RGIE+GHIF G KY+ Sbjct: 398 CVAGRDFHVDEFVEAAEVKEGDPAPDNQGTLALQRGIELGHIFQLGRKYTEAFDVQILDE 457 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 +GK MGSYGIG R++A + E HD KG+ WP +VAP+++ + D +A Sbjct: 458 NGKRAIPTMGSYGIGISRMLAVLAEQRHDDKGLNWPVAVAPYQVHVAVAN-KDAAAMEAG 516 Query: 366 EKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +K+ LS+ G +V +DD G +F A+LLG P IVG + D +E++ R Sbjct: 517 DKLVEELSQAGLEVLFDDRPKVSPGVKFKDAELLGMPFVAIVG-RAFKDGIIELRIRG-Q 574 Query: 425 IREDMSLEEVINYASHRFS 443 ++ +E+++ Sbjct: 575 ETLEVPADEIVDKLLELVR 593 >gi|52080260|ref|YP_079051.1| prolyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52785637|ref|YP_091466.1| prolyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|319645960|ref|ZP_08000190.1| prolyl-tRNA synthetase [Bacillus sp. BT1B_CT2] gi|81825303|sp|Q65JJ1|SYP_BACLD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|52003471|gb|AAU23413.1| prolyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52348139|gb|AAU40773.1| ProS [Bacillus licheniformis ATCC 14580] gi|317391710|gb|EFV72507.1| prolyl-tRNA synthetase [Bacillus sp. BT1B_CT2] Length = 572 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 111/266 (41%), Positives = 161/266 (60%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ +P L+E P DAE SH+L+LR G I Q++ G+YS++PL K + + +I+REE Sbjct: 1 MRQSRTLIPTLREVPADAEAKSHQLLLRAGFIRQNTSGVYSYMPLANKVIHKIQSIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P LQ A+ W ESGR+ +YG E++RL DR+ + G THEEV+T I R Sbjct: 61 MEKINAVEMLMPALQQAETWQESGRWYTYGPELMRLKDRHGREFALGATHEEVITSIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF + E +YN M+ + Sbjct: 121 EVKSYKRLPLTLYQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHSSAESLDETYNDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F R GL P+ A+SG +GG +HEF+ L+D GE + S + Sbjct: 181 YTNVFTRCGLNFRPVIADSGAMGGKDTHEFMALSDVGEDTIAYSDQSSYAANIEMAEVKE 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEK 266 + +++ + + E Sbjct: 241 TDAGEQAEMKELQEVHTPSVKTIEEV 266 Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 61/187 (32%), Positives = 104/187 (55%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ + D P+ K +GIEVG +F GT+YS M AT+ +G+ + MG Y Sbjct: 382 ADLRFIQEGDPSPDGKGTIRFAKGIEVGQVFKLGTRYSEAMDATYLDENGRAQPMLMGCY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R ++A++E HD KG+IWP V P+ + ++ + + EK+Y G Sbjct: 442 GIGISRTLSAIVEQHHDDKGLIWPLEVTPYDLHILALNMKNDAQVQLAEKLYEEFKANGY 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 DV +DD E+ G +FA +DL+G P+++ VG + + VE+K R TG +++ +E+ ++ Sbjct: 502 DVLFDDRAERAGVKFADSDLIGLPIRITVGKR-ADEGVVEVKIRKTGESFEIAADELFDF 560 Query: 438 ASHRFSN 444 + + Sbjct: 561 IEKQVKS 567 >gi|108799043|ref|YP_639240.1| prolyl-tRNA synthetase [Mycobacterium sp. MCS] gi|119868158|ref|YP_938110.1| prolyl-tRNA synthetase [Mycobacterium sp. KMS] gi|126434646|ref|YP_001070337.1| prolyl-tRNA synthetase [Mycobacterium sp. JLS] gi|122977105|sp|Q1BAA0|SYP_MYCSS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|152112933|sp|A1UER2|SYP_MYCSK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|108769462|gb|ABG08184.1| prolyl-tRNA synthetase [Mycobacterium sp. MCS] gi|119694247|gb|ABL91320.1| prolyl-tRNA synthetase [Mycobacterium sp. KMS] gi|126234446|gb|ABN97846.1| prolyl-tRNA synthetase [Mycobacterium sp. JLS] Length = 584 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 93/250 (37%), Positives = 141/250 (56%), Gaps = 1/250 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ SHKL++R G + G+Y+WLPLG + + I+R+E Sbjct: 4 RMSELFLRTLRDDPADAEVPSHKLLIRAGYVRPVGPGLYTWLPLGLRVFRKIEQIVRDEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G E+ P L + + R+ YG + RL DR D + GPTHEE+ T + Sbjct: 64 TAIGGQEILFPALLPRAPYETTNRWTEYGDTLFRLKDRRDNDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P +QIQ K+RDE RPR G++R REF+MKD+YSFD+ +G K +Y+ +Y Sbjct: 124 YSSYKDFPLILFQIQTKYRDEARPRAGILRGREFVMKDSYSFDVDDDGLKTAYHLHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGET-QVFCSKDFMDFPIPSENTDFD 240 RIF RLG+ + + A SG +GG S EF+ ++ GE V C + + + T Sbjct: 184 QRIFARLGVHYVIVSAVSGAMGGSASEEFLAESEVGEDTFVRCLQSGYAANVEAVLTRVP 243 Query: 241 DIISLNSIVE 250 + + + E Sbjct: 244 EPLPIEGQPE 253 Score = 147 bits (370), Expect = 5e-33, Method: Composition-based stats. Identities = 66/188 (35%), Positives = 96/188 (51%), Gaps = 4/188 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ VSARGIE+GHIF G KY+ SA G DGK + MG Sbjct: 399 GTIEAAEVRDGDPSPDGAGPLVSARGIEIGHIFQLGRKYTEAFSADVLGEDGKPVRLTMG 458 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VA + E HD G+ WP +VAPF + + I D R ++ L ++ Sbjct: 459 SYGIGVSRLVAVIAEQQHDELGLRWPAAVAPFDVH-VVIANKDDGARTGATELAGELDRL 517 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD G +F A+LLG P V+VG + D VE++ R +G + ++ +++ Sbjct: 518 GLEVLLDDRKSSPGVKFKDAELLGVPWIVVVG-RGWGDGVVELRDRFSGEKREIGVDDAA 576 Query: 436 NYASHRFS 443 Sbjct: 577 TEILATVR 584 >gi|73748213|ref|YP_307452.1| prolyl-tRNA synthetase [Dehalococcoides sp. CBDB1] gi|114152188|sp|Q3ZZD0|SYP_DEHSC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|73659929|emb|CAI82536.1| prolyl-tRNA synthetase [Dehalococcoides sp. CBDB1] Length = 569 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 107/252 (42%), Positives = 160/252 (63%), Gaps = 1/252 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F +E P DAE SH+L+LR+GMI Q + G+YS++PL +++ + IIR+E Sbjct: 1 MRYSRLFGKTQREIPSDAETISHQLLLRSGMIAQLTAGVYSFMPLAWRSIQKIENIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ G E+++P LQ ++W +SGR +G+ + L DR D+ ++ GPTHEEV+TD+ Sbjct: 61 MNKAGCQELAMPVLQPVEIWQQSGREAPFGQTLFHLKDRKDRNLVLGPTHEEVITDLASR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I+SYR+LP YQIQ KFRDE RPR G++R REF+MKD YSFD +PEG SY M + Sbjct: 121 YIQSYRDLPQRLYQIQAKFRDEPRPRGGLIRVREFIMKDMYSFDASPEGLDDSYQTMKQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y ++ R GL+S+ + A+SG IGG SHEF+++A++GE + + +E F Sbjct: 181 YESVYRRCGLESMVIDADSGAIGGKASHEFMIVAESGEDSIIYCPKCS-YAANAEKAVFK 239 Query: 241 DIISLNSIVEQW 252 ++ Sbjct: 240 KKTLPKETLKDL 251 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 66/187 (35%), Positives = 99/187 (52%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ + P + S RG+EVGHIF GT S A F A+G H + MG Y Sbjct: 379 ADIALAAEGSACPFCDGTFASKRGVEVGHIFKLGTFLSERFGANFTDAEGVSHPIIMGCY 438 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G+G R++AA IE +HD KGIIWP +AP+++ + + + V R++ EKIYA L G Sbjct: 439 GMGVGRLLAAAIEQNHDEKGIIWPMPIAPYQVYICGLFLDNPVVRESAEKIYAELEAKGI 498 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V +DD G +F ADLLG PL++ + + + VE K R E + L+ ++ Sbjct: 499 EVLFDDRELTAGVKFNDADLLGIPLRLTISPRNLDKGGVEFKLRRNKESELVPLDSIVER 558 Query: 438 ASHRFSN 444 + Sbjct: 559 VIATIKS 565 >gi|260802092|ref|XP_002595927.1| hypothetical protein BRAFLDRAFT_268618 [Branchiostoma floridae] gi|229281179|gb|EEN51939.1| hypothetical protein BRAFLDRAFT_268618 [Branchiostoma floridae] Length = 681 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 75/449 (16%), Positives = 145/449 (32%), Gaps = 51/449 (11%) Query: 9 PILQENP--------RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 +L+E RD + L H+ S G +LP G + + I+EE Sbjct: 261 KMLKEWKEFQEQAKERDHRKIGREQELF--FFHELSPGSCFFLPKGAHIYNKLIDYIKEE 318 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G E+ P + + LW SG +D Y + M + P + ++ Sbjct: 319 YHKRGFQEVVSPNMYNVKLWKTSGHWDHYEENMFSFEVEKET-FALKPMNCPGHCLMYDV 377 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 378 RPRSWRELPLRMADFGVLHRNELSGTLTGLTRVRRFQQDDAHIFCTMEQLEDE-IEGCLE 436 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 I+ G + + + P + K+ D + Sbjct: 437 FMNSIYTTFGF-DLKLFLSTRP-----------------EKAIGDKETWDRAEKHLASAL 478 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D + A Y D+ ++FD+L + + ++ + + Sbjct: 479 DKFGMPWKLNPGDGAFYGPKIDI---QVFDALRRAHQCATIQLDFNNP--------ERFN 527 Query: 300 ATFKGADGK--DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG V + +G++ A++ + I Sbjct: 528 LTYVSGDGDEKKRPVMIHRAILGSVERFIAILCENFG------GKWPFWLSPRQAMIVPV 581 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + +K+ + + G D D G+ + + A L + ++VG K V V Sbjct: 582 SPDQNEYAQKVRNSIHEAGFMCEADCDPGDTMNKKIRNAQLAQYNFIMVVGKKEVESGTV 641 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ R + + S+E+VI + Sbjct: 642 NVRTRDNKVHGERSVEDVILRFKKLQNER 670 >gi|223939080|ref|ZP_03630964.1| prolyl-tRNA synthetase [bacterium Ellin514] gi|223892240|gb|EEF58717.1| prolyl-tRNA synthetase [bacterium Ellin514] Length = 576 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 115/237 (48%), Positives = 165/237 (69%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++ +P L+E P +AEI SHKL+LR G++ + S G+Y+++PLG +AL V I+REE Sbjct: 1 MRWTQTLIPTLKETPAEAEITSHKLLLRAGLVRKLSGGLYTFMPLGLRALRKVEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+ +P +Q ++W +SGRY + + ++ DR K I GPTHEEV+T + Sbjct: 61 MNRAGALELLMPAMQPPEIWEKSGRYVTASEVFFKVRDRAKKEWILGPTHEEVITTLVAG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SYR LP FYQIQ KFRDE+RPRFG+MR++EF+MKDAYSFD+T E ++ SY KM+ + Sbjct: 121 EISSYRQLPKNFYQIQTKFRDEIRPRFGLMRAKEFIMKDAYSFDVTDELAQISYQKMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R GLK++ + A++G +GG SHEF+V A+TGE +V + ++ E Sbjct: 181 YTRIFQRCGLKAVAVEADTGVMGGKFSHEFMVPAETGENEVVYCEAC-NYSANIEKA 236 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 72/226 (31%), Positives = 108/226 (47%), Gaps = 5/226 (2%) Query: 221 VFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN--KRVS 278 V+ D + + D N VE+ D+ + ++ ++ Sbjct: 352 VYADTQLRDAAEMTTGANEDGFHYRNVSVERDIK-VNHWVDLRSVQVSEACSSCGKPLKI 410 Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 R IEVGH+F GTKYS + A F DGK MG YGIG R + A+IE S+D GI Sbjct: 411 QRAIEVGHVFKLGTKYSEKLGALFLDEDGKQKPAVMGCYGIGVTRTLQAIIEQSNDKDGI 470 Query: 339 IWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IWP SVAP+ + + + A EKIY+ L G DV DD E+ G +F ++L Sbjct: 471 IWPVSVAPYTVCITPLGVAAGSATMVLAEKIYSELVAQGIDVILDDRDERPGVKFKDSEL 530 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 +GFP+++ +G K ++ +VE+K R G+ + EE + Sbjct: 531 VGFPIRLGIGEKSLAKGEVELKLRG-GVLTPVKTEEAVAKILETIK 575 >gi|116070824|ref|ZP_01468093.1| Threonyl-tRNA synthetase, class IIa [Synechococcus sp. BL107] gi|116066229|gb|EAU71986.1| Threonyl-tRNA synthetase, class IIa [Synechococcus sp. BL107] Length = 615 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 74/439 (16%), Positives = 145/439 (33%), Gaps = 36/439 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD L L + + + G+ W P G + + R+ G + Sbjct: 204 EALRRDHRRLGKDLDLFS-IEDEAGAGLVFWHPRGARMRLLIEDFWRQAHFEGGYELLYT 262 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + LW SG D Y + M +++ P + + S ++SYR LP Sbjct: 263 PHVADISLWKTSGHLDFYAESMFGPMQVDEREYQLKPMNCPFHVLTYASKLRSYRELPIR 322 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + ++ +R E G+MR R F DA+ F L + S ++ RI Sbjct: 323 WAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPDQISDE-ILRILDLTERILSTFDF 381 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + + + P S+ D + I E Sbjct: 382 NNYEINLSTRPEKS-----------------IGSEAVWDLATKGLTEALERKGWNYKIDE 424 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D+ K+ D++ + S ++ FG Y K Sbjct: 425 GGGAFYGPKIDL---KIEDAIGRMWQCSTIQLDFNLPERFGLDY-------VAADGSKQQ 474 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + + G++ ++ ++ G W + + + E++ Sbjct: 475 PIMIHRAIFGSLERFFGIMTENYAGDFPFWLAPEQIRLLPVT------DDVQPYAEQLLD 528 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +L G D G+++G + + P+ ++G+K + V ++ R G S Sbjct: 529 QLKTAGIRATIDQSGDRLGKIIRTGEQMKIPVLAVIGAKEAEQNAVSLRSRRDGDLGVTS 588 Query: 431 LEEVINYASHRFSNNRPVL 449 ++ ++N A + +P L Sbjct: 589 VDALLNAAKWANTERQPGL 607 >gi|187918575|ref|YP_001884138.1| threonyl-tRNA synthetase [Borrelia hermsii DAH] gi|238689297|sp|B2S162|SYT_BORHD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|119861423|gb|AAX17218.1| threonyl-tRNA synthetase [Borrelia hermsii DAH] Length = 583 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 78/448 (17%), Positives = 156/448 (34%), Gaps = 39/448 (8%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L + +E R D +L L + G+ + P G + + REE + Sbjct: 172 KAYLKLREEIKRRDHRKLGRELDLFSVH-EDIGPGLIFFHPNGARIRAIIEDFWREEHFK 230 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + LW SG D Y + M + + P + I+ + Sbjct: 231 NGYDVLFTPHIGKSCLWETSGHLDFYKESMFEKMEMDKSNYYVKPMNCPFHIAIYNTGKH 290 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LPF + ++ +R E G MR R F DA+ + ++ L Sbjct: 291 SYRDLPFRWAELGTVYRYEKIGALHGTMRVRGFTQDDAHIICAYEQVKSE-VQEVLRFAL 349 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++++ G + + P + KD + + D+ Sbjct: 350 YMWNQFGFADLKAYLSTKP-----------------EKAVGDKDDWEMSVKVLEEALIDL 392 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I E A Y D+ K+ DSL ++S + F ++ + +A Sbjct: 393 NIAYDIDEGGGAFYGPKIDL---KIIDSLGREWQMSTIQFD----FNLPERFKMTYTAE- 444 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ ++ + G +W + I + N+ Sbjct: 445 --DGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPVWLAPLQVIIIPVNNV------VE 496 Query: 363 DACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + +I + G + D D ++ ++ P I+G K V + K+ I+ R Sbjct: 497 EYALEILSLFKNEGIRIKLDNDCNMRMNAKIRQYQSKKVPYMFIIGEKEVVEGKISIRTR 556 Query: 422 LTGIREDMSLEEVINYASHRFSNNRPVL 449 + L+E + + + N + +L Sbjct: 557 TNDQINGLELKEALEFVRLKVKN-KEIL 583 >gi|15889049|ref|NP_354730.1| threonyl-tRNA synthetase [Agrobacterium tumefaciens str. C58] gi|22654115|sp|Q8UEL1|SYT_AGRT5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|15156846|gb|AAK87515.1| threonyl-tRNA synthetase [Agrobacterium tumefaciens str. C58] Length = 667 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 75/449 (16%), Positives = 144/449 (32%), Gaps = 46/449 (10%) Query: 7 FLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L + RD ++ L + G+ W G + + A +R T Sbjct: 234 YLHVLAEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHGKGWRMFQTLTAYMRRRLANT- 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEML-----------RLADRNDKAMIYGPTHEEVM 114 E++ P + LW SG + Y + M + + + P + Sbjct: 291 YQEVNAPQVLDKSLWETSGHWGWYQENMFAVKSAHAFTHPDDKEADQRVFALKPMNCPGH 350 Query: 115 TDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHS 173 IF+ +KSYR +P + R E G+MR R F DA+ F + + Sbjct: 351 VQIFKHGLKSYREMPVRLAEFGNVHRYEASGALHGLMRVRGFTQDDAHVFCTEEQMAAEC 410 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 L ++ G I ++ + P S + A++ +V K + Sbjct: 411 LRIN-DLILSVYEDFGFSEIVVKLSTRPEKRVGSDDLWDRAESVMLEVL--KTIEEQSGG 467 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 T + A Y + L D++ + ++ FG Sbjct: 468 RIKTGI---------LPGEGAFYGPKFEY---TLKDAIGREWQCGTTQVDFNLPERFG-- 513 Query: 294 YSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 A + + + + G+M ++ + G +W + ++ Sbjct: 514 ------AFYIDQNSEKTQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPLQVVVATIT 567 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 D ++ L + G V D E+I + + P+ ++ G K Sbjct: 568 ------SDADDYGREVAEALREAGMAVETDFRNEKINYKVREHSVTKVPVIIVCGRKEAE 621 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYASHR 441 + V I+ + + MSLEE I Sbjct: 622 ERTVNIRRLGSQNQTSMSLEEAITSLVDE 650 >gi|50555740|ref|XP_505278.1| YALI0F11231p [Yarrowia lipolytica] gi|49651148|emb|CAG78085.1| YALI0F11231p [Yarrowia lipolytica] Length = 755 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 71/452 (15%), Positives = 156/452 (34%), Gaps = 41/452 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +++ + + RD + L + + S G WLP G + + ++R+E Sbjct: 327 MTEHLKFLEEAAKRDHRKIGREQELF--LFNDMSPGSCFWLPHGARIYSALTDLLRKEYR 384 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G E+ P + ++ LW SG + +Y +M + + P + +F++ Sbjct: 385 KRGYEEVITPNMYNSKLWETSGHWQNYKDDMFTF-EIEKEKFGLKPMNCPGHCLMFKARD 443 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY+ LP+ + R+E G+ R R F DA+ F + + +F Sbjct: 444 RSYKELPWRVADFGVIHRNEASGALTGLTRVRRFQQDDAHIFCMPSQIQSE-ITGIFDFL 502 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +I+ G EF + T + + + + Sbjct: 503 KKIYTIFG------------------FEFKMKLSTRPDKYVGEIETWNDAEKQLEEALNK 544 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + A Y D+ + D+L + + ++ F ++ L + Sbjct: 545 WGANWELNPGDGAFYGPKIDI---VISDALHRWHQCATIQLD----FQLPNRFDLNFKNS 597 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESS----HDGKGIIWPDSVAPFKISLINIKAH 357 +G+ + + + R + E + WP ++P ++ +I + Sbjct: 598 AAMGEGEADSAALYTRPVMIHRAIYGSFERMTAILCEHFAGKWPFWLSPRQVLVIPVGPK 657 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D +++ L G D+ + + A L + IVG + + V Sbjct: 658 ---YNDYAQEVRDELVDAGFFADVDNGPNTLQKKVREAQLKQYNFTFIVGEEEKTAKSVN 714 Query: 418 IKHRLTGIRE----DMSLEEVINYASHRFSNN 445 I+ R ++ + L+EVI+ + Sbjct: 715 IRDRDDQSKQAKAASIPLDEVISRLHKLKDSK 746 >gi|260424720|ref|ZP_05778980.1| proline--tRNA ligase [Dialister invisus DSM 15470] gi|260402944|gb|EEW96491.1| proline--tRNA ligase [Dialister invisus DSM 15470] Length = 576 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 112/237 (47%), Positives = 155/237 (65%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK + P L+E P DA + SH+ ML+ GM+ + S G+Y++LPL +++ V I+REE Sbjct: 3 MLASKLYSPTLREIPSDAVVVSHQYMLKAGMMRKVSNGLYAFLPLALRSVRKVEDIVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N G+ E+ +P Q A++W +S R+D YG+EM +L DR+ GPTHEE++T + + Sbjct: 63 MNAIGSQEILMPITQPAEIWKQSERWDVYGEEMFKLNDRHGHEYCLGPTHEELVTVLAKM 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY+ LP + YQIQ K+RDE RPRFG+MRSREF+MKDAY+FD+ EG Y+ M+ + Sbjct: 123 DTSSYKQLPVSLYQIQNKYRDEKRPRFGLMRSREFIMKDAYTFDMDEEGLDRQYHLMYDA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R GL P+ A+SG IGG SHEF V+AD+GE + KD DF E Sbjct: 183 YTRIFTRCGLHFRPVVADSGAIGGSGSHEFEVIADSGEADIVYCKDC-DFAANIEAV 238 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 5/233 (2%) Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 AD E V + M+ N + +N + + D P+ Sbjct: 341 ADNFEIIVDTTVMEMEDACCGANAVDKHYVHVNPKRDFGDV---RVETIRLITAEDCCPK 397 Query: 274 NKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 + +GIEVG +F GTKYS + T+ DGK H + MG YGIG R VAA IE Sbjct: 398 CGGMIELKKGIEVGQVFKLGTKYSEKLGCTYLDRDGKTHPMVMGCYGIGITRTVAASIEQ 457 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 +HD GIIWP ++AP+++ ++ D+ +A +Y ++ +V DD E+ G + Sbjct: 458 NHDKDGIIWPVAIAPYEVVIVPANNKDEGVMNAARHLYDKMEDCRDEVILDDRDERAGIK 517 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 F ADL+G+P++V +G K+ VE++ R +G+ +++L + Sbjct: 518 FKDADLIGYPIRVTIGKKWKESGLVEVRLRRSGVVSEVALADCKTKVLEMLEE 570 >gi|156838419|ref|XP_001642915.1| hypothetical protein Kpol_411p2 [Vanderwaltozyma polyspora DSM 70294] gi|156113495|gb|EDO15057.1| hypothetical protein Kpol_411p2 [Vanderwaltozyma polyspora DSM 70294] Length = 729 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 73/446 (16%), Positives = 156/446 (34%), Gaps = 42/446 (9%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E RD + L + ++ S G WLP G + + ++R E + G Sbjct: 313 LKFLEEAAKRDHRRLGKEQELF--LFNEMSPGSCFWLPHGTRIYSTLVDMMRTEYRKRGY 370 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + ++ LW SG + +Y + M + P + +F+S +SYR Sbjct: 371 EEVITPNMYNSKLWETSGHWANYKENMFTFEVEKET-YGLKPMNCPGHCLMFKSRERSYR 429 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP+ + R+E G+ R R F DA+ F + + Sbjct: 430 ELPWRVADFGVIHRNEYSGALSGLTRVRRFQQDDAHIFCT-----QDQIEGEIENIFNFL 484 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + EF + T + + + + + Sbjct: 485 QFVYGVF--------------GFEFKMELSTRPEKYVGELETWNNAEAKLQSALEKWGGD 530 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + A Y D+ + D+L + + ++ F ++ L A Sbjct: 531 WELNPGDGAFYGPKIDIM---ISDALKRWHQCATIQLD----FQLPNRFELEFKAKDNQE 583 Query: 306 D-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + + V + +G++ + A++ + WP ++P ++ ++ + ++ Sbjct: 584 NENYERPVMIHRAILGSVERMTAILT---EHFAGKWPFWLSPRQVLVVPVGVK---YQEY 637 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ +L G D G + + LL + IVG +++ V I++R Sbjct: 638 AQEVRDKLHAAGFYADVDLSGNTLQKKVRTGQLLKYNFIFIVGEDELTNKTVNIRNRDIV 697 Query: 425 IRE----DMSLEEVINYASHRFSNNR 446 ++ ++L+ V+ S R Sbjct: 698 EQQGKNAAIALDLVVEQLSSLKQEKR 723 >gi|227549046|ref|ZP_03979095.1| prolyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291] gi|227078900|gb|EEI16863.1| prolyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291] Length = 604 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 113/323 (34%), Positives = 164/323 (50%), Gaps = 4/323 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+E+P DAE+ SHKL++R G + + + G+YSWLPLG + L + ++REE Sbjct: 15 RLSELFLRTLREDPADAEVPSHKLLVRAGYVRRAAPGVYSWLPLGLRTLRKIETVVREEM 74 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA+E+ P L + + ++ R+ YG ++ RL DR M+ GPTHEE+ T +S Sbjct: 75 DAMGALELLFPALLPREPYEQTNRWTEYGDDLFRLKDRKGADMLLGPTHEEMFTVAVKSM 134 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSFD+T EG + SY K +Y Sbjct: 135 FSSYKDFPVTLYQIQTKYRDEARPRAGILRGREFVMKDSYSFDMTDEGLEQSYQKHRSAY 194 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF R+G++ A SG +GG S EF+ +D+GE S D+ E Sbjct: 195 QRIFDRVGIRYEICEATSGAMGGSASEEFLAYSDSGEDTFVISTAG-DYAANVEAVVTVA 253 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPE-NKRVSARGIEVGHIFYFGTKYSLPMSA 300 + Y+ E L D E V R ++ Sbjct: 254 PEPRPIEGQPEAQEYSTPRSETIEALVDWANEQGVLVDGRPVQASDT--LKCMMIKVDDP 311 Query: 301 TFKGADGKDHYVQMGSYGIGAMR 323 DG ++ I R Sbjct: 312 RVLDDDGAPVGPRLTGVLIPGDR 334 Score = 136 bits (343), Expect = 7e-30, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 91/189 (48%), Gaps = 6/189 (3%) Query: 258 ATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 + + D P RGIE+GHIF G KY+ M GK MG Sbjct: 417 GFIEAAEVREGDPSPTGNGTVKLARGIELGHIFQLGRKYTEAMDVQILDEGGKRAVPTMG 476 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R++A V E HD KG++WP ++AP+++ ++ D A E I L Sbjct: 477 SYGIGVSRMMAVVAEQRHDEKGLVWPVAIAPYQVHVVVAN-KDAAALQAGEDIAGELDAA 535 Query: 376 GCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD + G +F A+LLG P VI+G + ++ VE++ R G +++ EV Sbjct: 536 GLEVLFDDRPKTSPGVKFKDAELLGMPFIVILG-RSFAEGIVELRIRG-GETLEVASAEV 593 Query: 435 INYASHRFS 443 + + Sbjct: 594 VAKVRELVA 602 >gi|195443008|ref|XP_002069231.1| GK21088 [Drosophila willistoni] gi|194165316|gb|EDW80217.1| GK21088 [Drosophila willistoni] Length = 699 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 74/436 (16%), Positives = 153/436 (35%), Gaps = 41/436 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + ++ E + G E+ Sbjct: 294 EEAAKRDHRKIGREQELF--FFHELSPGSCFFQPRGAHIYNTLMNFMKAEYRKRGFQEVI 351 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + +A LW+ SG + Y + M +K P + IF + +S+R LP Sbjct: 352 SPNIYNAKLWMTSGHWQHYAENMFSFEVEKEK-FALKPMNCPGHCLIFDNRNRSWRELPL 410 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + +++ G Sbjct: 411 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTPDQIKSEM-KGCLDFLHHVYNIFG 469 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 F ++ T + + + + D+ Sbjct: 470 FS------------------FQLVLSTRPEKYLGELEQWNDAEKALAESLDEFGIPWKEN 511 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + + ++ F +++L A K Sbjct: 512 PGDGAFYGPKIDI---TIMDALKRAHQCATIQLD----FQLPIRFNLNYIA---DDGEKK 561 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + +G++ + A++ + WP ++P ++ ++ + + + + Sbjct: 562 RPVIIHRAILGSVERMIAILT---ENYAGKWPFWLSPRQVMVVPVGP---AYDEYAQSVR 615 Query: 370 ARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L G D D G+ + + A L F ++VG K S + V ++ R + + Sbjct: 616 EQLHAAGFMSEADCDAGDTMNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGE 675 Query: 429 MSLEEVINYASHRFSN 444 +S+ E+I+ + N Sbjct: 676 VSVAELISKL-QKIRN 690 >gi|306836356|ref|ZP_07469334.1| proline--tRNA ligase [Corynebacterium accolens ATCC 49726] gi|304567716|gb|EFM43303.1| proline--tRNA ligase [Corynebacterium accolens ATCC 49726] Length = 594 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 105/282 (37%), Positives = 158/282 (56%), Gaps = 7/282 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+E+P DAE+ SHKL++R G + + + GIY+WLPLG + L + ++R+E Sbjct: 9 RLSELFLRTLREDPADAEVPSHKLLVRAGYVRRVAPGIYTWLPLGLRTLRKIEDVVRQEM 68 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G EM P L + + ++ R+ YG + RL DR + ++ GPTHEE+ + + Sbjct: 69 DAIGGQEMLFPALLPREPYEKTNRWVEYGPNLFRLQDRKNADLLLGPTHEEMFANAVKDM 128 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR GV+R REF+MKD+YSFD+ EG SY + +Y Sbjct: 129 YSSYKDFPVTLYQIQTKYRDEERPRAGVLRGREFVMKDSYSFDMNDEGLDSSYARHRKAY 188 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF-- 239 +F RL + +A SG +GG S EF+ L++ GE +F D+ E Sbjct: 189 QNVFDRLEIDYAICKATSGAMGGSASEEFLALSEVGE-DLFVRSTEGDYAANVEAVVTQA 247 Query: 240 --DDIISLNSIVEQWTAPYAATSD--VHNEKLFDSLPENKRV 277 + I+ +++ P AAT + VH K D + V Sbjct: 248 PPEKDIAGQPAAKEYRTPDAATIEALVHWAKTEDIAVDGHEV 289 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 6/199 (3%) Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPE--NKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 V + K D P+ RGIE+GHIF G KY+ Sbjct: 398 CVAGRDFHVDEFVEAAEVKEGDPAPDNQGTLALQRGIELGHIFQLGRKYTEAFDVQILDE 457 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 +GK MGSYGIG R++A + E HD KG+ WP +VAP+++ + D +A Sbjct: 458 NGKRAIPTMGSYGIGISRMLAVLAEQRHDDKGLNWPVAVAPYQVHVAVAN-KDAAAMEAG 516 Query: 366 EKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +K+ LS+ G +V +DD G +F A+LLG P IVG + D +E++ R Sbjct: 517 DKLVEELSQAGLEVLFDDRPKVSPGVKFKDAELLGMPFVAIVG-RAFKDGIIELRIRG-Q 574 Query: 425 IREDMSLEEVINYASHRFS 443 ++ +E+++ Sbjct: 575 ETLEVPADEIVDKLLELVR 593 >gi|257459695|ref|ZP_05624804.1| prolyl-tRNA synthetase [Campylobacter gracilis RM3268] gi|257443120|gb|EEV18254.1| prolyl-tRNA synthetase [Campylobacter gracilis RM3268] Length = 572 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 120/320 (37%), Positives = 163/320 (50%), Gaps = 22/320 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK F P L+E PRDA + SH L++R G I Q G+Y++LPLG+ L+ + A+IR+E Sbjct: 1 MKFSKLFAPSLKEAPRDAVLPSHALLIRAGFIEQLGSGLYNFLPLGKIVLERICAVIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+S + SAD W +SGRY YGKE+LR DR D + PT+EE + Sbjct: 61 MDAAGAQEVSFSVVTSADAWKKSGRYAKYGKELLRFKDRKDNDFVLSPTNEEAAVLMVAD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI KFRDE RPRFG++R REF MKDAYSF K + M + Sbjct: 121 KITSYKQLPLNIYQINTKFRDEARPRFGLLRGREFTMKDAYSFHADAADMKREFEVMRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL + A+SG IGG S EF+VLAD GE + K ++ E Sbjct: 181 YSRIFTRLGLNFRTVDADSGAIGGSGSKEFMVLADNGEDDIVVCKRC-EYAANIE----- 234 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIF----YFGTKYSL 296 A A + D + + K + + I+ F F T ++ Sbjct: 235 ------------AARRAPKTTNAAAPETDGMMKFKTPAMKTIDAVAEFFKVDKFYTIKAV 282 Query: 297 PMSATFKGADGKDHYVQMGS 316 A ++ + G Sbjct: 283 IKKALYEDRSEIVAFFIRGC 302 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 69/192 (35%), Positives = 105/192 (54%), Gaps = 4/192 (2%) Query: 257 AATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 + +D+ + D+ P + +GIEVGHIF GT+YS PM A F A+GK M Sbjct: 382 SRFADLAAVGVGDACPCCGGELSITKGIEVGHIFQLGTRYSEPMGARFLDANGKARAFYM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G YGIGA R++A IESSHD +G +WP +APF++ +I D + EK+Y + + Sbjct: 442 GCYGIGASRLIAVAIESSHDERGCVWPRELAPFELEIIISNHKDAAAVEFAEKLYEQCRE 501 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G V DD E+ G + +L+GFP V+VG K +++ VE R R+ +S +E+ Sbjct: 502 RGIRVLLDDRAERFGVKMNDFELMGFPYAVLVG-KALAERSVEFITRAGLKRQSVSADEI 560 Query: 435 INYA-SHRFSNN 445 +++ N Sbjct: 561 LSFIERKLIEKN 572 >gi|50954739|ref|YP_062027.1| threonyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07] gi|71657985|sp|Q6AFC3|SYT_LEIXX RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|50951221|gb|AAT88922.1| threonyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 695 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 63/451 (13%), Positives = 130/451 (28%), Gaps = 49/451 (10%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + + RD +L L + + G+ + P G + +R+ G Sbjct: 271 RMEEAAKRDHRKLGVELDLFS-FPDEIGSGLAVFHPKGGIIRKEIEDYMRDRLIANGYEM 329 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTD 116 ++ P + L+ S + Y + M R + P + + Sbjct: 330 VNTPHITKGHLFETSQHLNWYREGMFPPMHLDEERDAEGNVTRQGQDYYLKPMNCPMHNL 389 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IFRS +SYR LP + +R E G+ R R DA+ + + + Sbjct: 390 IFRSRGRSYRELPLRLSEFGTVYRYEKSGTLSGLTRVRGLTQDDAHIYVTEEQIRDE-FA 448 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 + L GL + + + S + + + Sbjct: 449 RQLQFVLETLRGYGLTDFYLELST----------------KDPEKYVGSDESWETATETL 492 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 + A Y + + D++ ++S ++ Sbjct: 493 REVAVESGLELVDDPGGAAFYGPKI---SVQARDAIGRTWQLSTVQLDFNQP-------- 541 Query: 296 LPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + ADG + +G++ A++ H G +W I + Sbjct: 542 ELFELEYNAADGTRKQPAMIHRALLGSIERFFAILLEHHAGAFPVWLAPTQVVGIPVA-- 599 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 + + A+L G D +++ + P Q+IVG + S Sbjct: 600 ----DAYGPFLDDVIAQLRARGVRAEVDHSDDRMQKKIRTHTKAKVPFQLIVGEEDASAG 655 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + R ++++E I + Sbjct: 656 TVSFRFRDGTQLNGVAVDEAIERIVASIQTH 686 >gi|91087799|ref|XP_967345.1| PREDICTED: similar to RH56418p [Tribolium castaneum] Length = 707 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 76/432 (17%), Positives = 148/432 (34%), Gaps = 42/432 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD L H+ S G + P G + + I++E + G E+ Sbjct: 302 EEAAKRDHRKIGRDQELF--FFHELSPGSCFFQPRGAHIYNTLINFIKKEYRKRGFQEVI 359 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + +A LW SG + Y M D P + IF + +S+R LP Sbjct: 360 SPNIFNAKLWQVSGHWAHYADNMFSF-DVEKDKFALKPMNCPGHCLIFDNRTRSWRELPL 418 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + ++ G Sbjct: 419 RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCALEHIKQE-IKGALDFLSHVYSVFG 477 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 F V+ T + + + + DD + S+ Sbjct: 478 FT------------------FNVVLSTRPEKYLGDLAMWEQAEKALSEGLDDFGAPWSVN 519 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + ++ F ++ + ++ G+ Sbjct: 520 PGDGAFYGPKIDI---TVHDALKRAHQCGTIQLD----FQLPIRF----NLSYVSESGEK 568 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + +G++ + A++ + G WP ++P + +I + + + + Sbjct: 569 KRPVIIHRAILGSVERMIAILT---ESCGGKWPFWISPRQAMVIPVGP---TYDEYAQDV 622 Query: 369 YARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +L + G D D G+ + + A L F ++VG K S V ++ R + Sbjct: 623 KKKLYEAGFMAEVDTDAGDTMNKKIRNAQLAQFNFILVVGEKERSSQTVNVRTRDNIVHG 682 Query: 428 DMSLEEVINYAS 439 ++S+E +I Sbjct: 683 EISVEGLIEKFK 694 >gi|87124051|ref|ZP_01079901.1| threonyl-tRNA synthetase [Synechococcus sp. RS9917] gi|86168620|gb|EAQ69877.1| threonyl-tRNA synthetase [Synechococcus sp. RS9917] Length = 612 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 66/432 (15%), Positives = 132/432 (30%), Gaps = 37/432 (8%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + +E RD L L + + + G+ W P G + + R+ G Sbjct: 198 YQRRKEEALRRDHRRLGKDLDLFS-IEDEAGAGLVFWHPRGARMRLLIEDFWRQAHFEGG 256 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + LW SG D Y + M +++ P + + S ++SY Sbjct: 257 YDLLYTPHVADIGLWKTSGHLDFYSESMFGPMQVDEREYQLKPMNCPFHVLTYASRLRSY 316 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + ++ +R E G+MR R F DA+ F L + S ++ I Sbjct: 317 RELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDE-ILRILNLTETI 375 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 ++ + + P D + Sbjct: 376 LSAFDFRNYEINLSTRPEKS-----------------IGDDAVWDLATQGLIEALERKGW 418 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y D+ K+ D++ + S ++ F +++L A Sbjct: 419 AYKVDAGGGAFYGPKIDL---KIEDAIGRMWQCSTIQLD----FNLPERFALDYVAA--D 469 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + + + R + E+ Sbjct: 470 GSKQRPIMIHRAIFGSLERFFGIMTENYAGDFPFWLAPEQIRLLPVT-------DEVLAD 522 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ +L G D GE++G + + PL ++G+K V ++ R G Sbjct: 523 AQQLSDQLRAAGIRATVDRSGERLGKLIRTGEQMKIPLLAVIGAKEAEQGSVSLRSRRDG 582 Query: 425 IREDMSLEEVIN 436 ++ + +I Sbjct: 583 DLGSVNRKALIE 594 >gi|317487879|ref|ZP_07946471.1| threonyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA] gi|325830610|ref|ZP_08164031.1| threonine--tRNA ligase [Eggerthella sp. HGA1] gi|316913005|gb|EFV34522.1| threonyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA] gi|325487356|gb|EGC89798.1| threonine--tRNA ligase [Eggerthella sp. HGA1] Length = 637 Score = 221 bits (562), Expect = 3e-55, Method: Composition-based stats. Identities = 75/443 (16%), Positives = 147/443 (33%), Gaps = 47/443 (10%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E RD +L + T M G+ +LP G + + + +R + G Sbjct: 229 LRNLEEAEKRDHRKLGRELGIYT-MDPLAGVGLPMYLPKGARVIRTMQEWLRRDLYERGY 287 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEML-------RLADRNDKAMIYGPTHEEVMTDIFR 119 E+ P + +AD+W SG Y Y + M D P + +++ Sbjct: 288 EEVITPHVYNADVWKTSGHYGFYKENMYFFNINEGTDEDPRLTEYAVKPMNCPGHVMLYK 347 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 S + SYR+LP +++ +R E+ G++R+R F DA+ F + Sbjct: 348 SELHSYRDLPLRYFEFGTVYRHEMSGVVHGLLRARGFTQDDAHVFCTRDQVVDEVVAI-L 406 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 I G + T + + D + + Sbjct: 407 DLVDHIMSTFGFQYE------------------AEISTRPEKSIGTDDMWEHATNALKEA 448 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 I E A Y D+ K+ D++ + S ++ Sbjct: 449 CARHELAYDINEGDGAFYGPKIDI---KVKDAIGRTWQCSTVQVDFNMP--------ERF 497 Query: 299 SATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T++ D ++ + G++ ++ + G +W V + L Sbjct: 498 ELTYRTEDNTEERPWMLHRAIFGSIERFLGILIEHYAGALPLWLAPVQVAVLPLA----- 552 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 +A ++ +L G + D E + + A A P V++G K + + V Sbjct: 553 -DRHNEAAHELAKQLKAAGGRIEVYDQNEPMRVKIAKAQSQKIPYMVVLGDKEIENGTVS 611 Query: 418 IKHRLTGIREDMSLEEVINYASH 440 ++ R G +E+++ Sbjct: 612 VRERHEGDLGAWPVEQLVEKLRE 634 >gi|314933442|ref|ZP_07840807.1| proline--tRNA ligase [Staphylococcus caprae C87] gi|313653592|gb|EFS17349.1| proline--tRNA ligase [Staphylococcus caprae C87] Length = 567 Score = 221 bits (562), Expect = 3e-55, Method: Composition-based stats. Identities = 111/237 (46%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P ++E P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N++ I+REE Sbjct: 1 MKQSKVFIPTMREVPAEAEALSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNISKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T + R Sbjct: 61 MESIDAVEILMPALQQAELWEESGRWGAYGPELMRLKDRNGREFALGPTHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ K+RDE RPRFG++R REF+MKDAYSF E +Y M+ + Sbjct: 121 ELKSYKRLPLTLFQIQSKYRDEKRPRFGLLRGREFIMKDAYSFHADEESLDATYQDMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R+G+ + P+ A+SG IGG+ +HEF+ L++ GE + + D+ E Sbjct: 181 YSRIFKRVGINARPVVADSGAIGGNHTHEFMALSEIGEDTIVY-SNESDYAANIEKA 236 Score = 157 bits (398), Expect = 3e-36, Method: Composition-based stats. Identities = 78/231 (33%), Positives = 117/231 (50%), Gaps = 3/231 (1%) Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENK 275 E +++ D + D +N+ VE + E S K Sbjct: 339 KEIKIYADNYVKDLNNLVIGANEDGYHYVNANVERDFNIDEYGDFRFILEGEMLSDGSGK 398 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E ++D Sbjct: 399 AQFAEGIEVGQVFKLGTKYSEAMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNNDE 458 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 GIIWP SV PF + LI I R+ +++YA+L+ DV +DD E+ G +F A Sbjct: 459 NGIIWPKSVTPFDLHLITINPKKDDQRELGDQLYAQLNDK-FDVLYDDRKERAGVKFNDA 517 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 DL+G PL+V+VG + + VE+K RL G E++ + ++ NY + + Sbjct: 518 DLIGLPLRVVVGKR-AEEGVVEVKQRLNGESEEIHVNDLENYLKDLYDKLK 567 >gi|194765983|ref|XP_001965104.1| GF21565 [Drosophila ananassae] gi|190617714|gb|EDV33238.1| GF21565 [Drosophila ananassae] Length = 749 Score = 221 bits (562), Expect = 3e-55, Method: Composition-based stats. Identities = 72/432 (16%), Positives = 148/432 (34%), Gaps = 40/432 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + ++ E + G E+ Sbjct: 344 EEAAKRDHRKIGREQELF--FFHELSPGSCFFQPRGAHIYNTLMDFMKAEYRKRGFQEVI 401 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + +A LW+ SG + Y + M +K P + IF + +S+R LP Sbjct: 402 SPNIYNAKLWMTSGHWQHYAENMFSFEVEKEK-FALKPMNCPGHCLIFDNRNRSWRELPL 460 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + ++ G Sbjct: 461 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEM-KGCLEFLKHVYTIFG 519 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 F ++ T + + + + ++ Sbjct: 520 FS------------------FQLVLSTRPEKYLGELEQWNDAEKALAESLNEFGMPWKEN 561 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + + ++ F +++L A K Sbjct: 562 PGDGAFYGPKIDI---TIMDALKRAHQCATIQLD----FQLPIRFNLSYIA---DDGEKK 611 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + +G++ + A++ + WP ++P ++ ++ + + + Sbjct: 612 RPVIIHRAILGSVERMIAILT---ENFAGKWPFWLSPRQVMVVPVGP---AYDQYAQSVR 665 Query: 370 ARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L G D D G+ + + A L F ++VG K S + V ++ R + + Sbjct: 666 DQLHAAGFMSEADCDAGDTMNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGE 725 Query: 429 MSLEEVINYASH 440 +S+ E+I Sbjct: 726 VSVAELITKLQK 737 >gi|226306390|ref|YP_002766350.1| threonyl-tRNA synthetase [Rhodococcus erythropolis PR4] gi|259516659|sp|C0ZZ26|SYT_RHOE4 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226185507|dbj|BAH33611.1| threonyl-tRNA synthetase [Rhodococcus erythropolis PR4] Length = 685 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 65/451 (14%), Positives = 132/451 (29%), Gaps = 50/451 (11%) Query: 7 FLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L + RD +L L + + G+ + P G + R G Sbjct: 251 YLELLAEAERRDHRKLGTELDLFS-FPDELGSGLPVFHPKGGIIRTEMENYSRSRHIEAG 309 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEV 113 ++ P + L+ SG D Y M + + P + + Sbjct: 310 YEFVNTPHITKGHLYEVSGHLDWYRDGMFPAMHVDEELNEDGTVRKPGQDYYLKPMNCPM 369 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IFR+ +SYR LP ++ +R E G+ R R DA+ + + Sbjct: 370 HNLIFRARGRSYRELPLRLFEFGSVYRYEKSGVIHGLTRVRGMTQDDAHIYCTREQMRDE 429 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 L + GL + + + S D + Sbjct: 430 L-TTTLQFVLNLLKDYGLDDFYLELST----------------KNPDKFVGSDDVWEEAT 472 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y + ++ D+L ++S ++ F Sbjct: 473 ATLAEVGEASGLTLVPDPGGAAFYGPKI---SVQVKDALGRTWQMSTIQLD----FNLPE 525 Query: 293 KYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 ++ + G DG K V + G++ V+ + G W V I + Sbjct: 526 RF----ELEYTGNDGVKTRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPV 581 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + D + +L G D +++ + P ++ G + V Sbjct: 582 A------EAFADHLFDVTKKLKAAGVRAEVDFSDDRMQKKIRNHTTQKVPFMLLAGERDV 635 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 V + R + +++ + + Sbjct: 636 EAGAVSFRFRDGTQINGIPVDDAVRIITEWI 666 >gi|260436778|ref|ZP_05790748.1| prolyl-tRNA synthetase [Synechococcus sp. WH 8109] gi|260414652|gb|EEX07948.1| prolyl-tRNA synthetase [Synechococcus sp. WH 8109] Length = 597 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 115/277 (41%), Positives = 157/277 (56%), Gaps = 6/277 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P +AEI SH+L+LR G I + GIY++LPL + L + A++REE Sbjct: 5 MRVSRLLLVTLRDIPAEAEITSHQLLLRAGYIRRVGSGIYAYLPLMWRVLQKITAVVREE 64 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 NR GA E +P L A+LW +SGR+ Y M L DR + + GPTHEEV+T + Sbjct: 65 MNRAGAQETLLPQLHPAELWQKSGRWQGYTAGEGIMFHLEDRQGRELGIGPTHEEVITSL 124 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + + +Y M Sbjct: 125 AGELLRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHASEADLRETYGAM 184 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y RIF R GL ++P+ A+SG IGG S EF+V AD GE + S D + Sbjct: 185 DQAYRRIFERCGLDAVPVDADSGAIGGAASQEFMVTADAGEDLILISDDGQYAANQEKAV 244 Query: 238 DFDDIISLNSIVEQWTAP---YAATSDVHNEKLFDSL 271 S + + P + + N K +D Sbjct: 245 SIPSAASPLPDGPEESIPTPGLGSIESLCNAKGWDPS 281 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 64/185 (34%), Positives = 93/185 (50%), Gaps = 4/185 (2%) Query: 261 DVHNEKLFDSL---PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ N + D P+++ RGIEVGHIF G KYS M + F +GK MG Y Sbjct: 412 DLRNARAGDVCQHNPKSRLTEKRGIEVGHIFQLGRKYSQAMESRFTNENGKTEPFWMGCY 471 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+ A +E HD GI WP ++APF+ ++ D + E +YA L G Sbjct: 472 GIGVSRLAQAAVEQHHDDSGICWPTAIAPFEAIVVVANIQDDIQAQLGEALYAELQAAGV 531 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 DV DD E+ G +F ADL+G P +++VG + S+ VE+ R + + + E + Sbjct: 532 DVLLDDRKERAGVKFKDADLIGIPWRIVVG-RDASEGTVELVCRSSREVQKLPHAEAVTC 590 Query: 438 ASHRF 442 Sbjct: 591 LIKAL 595 >gi|313681237|ref|YP_004058975.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994] gi|313154097|gb|ADR32775.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994] Length = 602 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 71/440 (16%), Positives = 162/440 (36%), Gaps = 38/440 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD ++ L T + G WLP G + + ++ + + G Sbjct: 197 YLDQMAEAEKRDHRKIGAEMKLFT-FREEVGAGFPIWLPAGARMRSRLEQLLFKAHRKRG 255 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +DLW SG Y +YG+ M ++ P + ++ + SY Sbjct: 256 YEPVRGPEMLRSDLWKVSGHYQNYGENM-YFTHIDELEFGVKPMNCVGHIKVYEHDLHSY 314 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP +++ + R E+ G+ R REF DA+ F T + + ++ +I Sbjct: 315 RDLPLKYFEYGVVHRHEMTGALHGLFRVREFTQDDAHIFC-TADQIEQQIIEVVDFVDKI 373 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + T + + + T D Sbjct: 374 MKTFEFNYKM------------------MISTKPEKAVGDDAVWEISTNALKTAMDKNNL 415 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D++ + ++ F +Y+ +A + Sbjct: 416 SYEIDEGGGAFYGPKIDI---KITDAIGREWQCGTIQLDFNLPARFELEYNGEENAKIQ- 471 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 V + +G+ ++ + G+ ++ +AP +++++ I + Sbjct: 472 ------PVMIHRAILGSFERFVGILTEHYAGEFPMF---IAPTQVAIVPIAPTHE---AY 519 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ +L +G D D E + + A+ P+ +++G + V++ + ++ R + Sbjct: 520 ARELADKLIDMGADFEIFDKNESLNKRIRTAEKGRVPMIIVLGDEEVANKSIAVRDRRSR 579 Query: 425 IREDMSLEEVINYASHRFSN 444 + ++S E+ I+ + + Sbjct: 580 EQYNLSEEDFISLVKQKINE 599 >gi|148654295|ref|YP_001274500.1| threonyl-tRNA synthetase [Roseiflexus sp. RS-1] gi|148566405|gb|ABQ88550.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Roseiflexus sp. RS-1] Length = 595 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 133/444 (29%), Gaps = 38/444 (8%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E R D +L L G+ + P G+ + + +RE Q R G Sbjct: 184 YLHRLEEAKRRDHRRIGKELGLFY-FSDDIGPGLPLFTPKGEMLRHLMESYVREVQTRYG 242 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA--DRNDKAMIYGPTHEEVMTDIFRSHIK 123 + + L+ +SG Y++Y + M D + MT I Sbjct: 243 YQHVWTGHIVREALYKKSGHYEAYRENMFPPMVEDEEHIYRLKPMNCPSHMTLYKEMGIH 302 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP F + +R E R G+ R R D + F P+ + + Sbjct: 303 SYRDLPLRFAEFATLYRYEDRGTLTGLTRVRALTQDDCHIFCR-PDQIEEEFGLALRLIR 361 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + +R GG + D + T D Sbjct: 362 EVLETYRFTDYRVRLSLRGAGGK---------------YITDDEAWDLAEHALRTALDHY 406 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y +D D L ++S ++ G + Sbjct: 407 GVEYEEAPGEAAIYGPKADFL---ARDVLGREWQLSTIQVDFIQPRRLG--------LEY 455 Query: 303 KGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 DG+ + G+ V+ + G +W V I D+ Sbjct: 456 IAEDGQPRTPVVLHRAVTGSTERFLGVLIEHYAGAFPLWLAPVQAI-----VIPISDERH 510 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 ++ +L+ V D +++ ++ A L P +I+G + V ++ R Sbjct: 511 SAYAAEVGRQLTAAQLRVEVDLSKDRMQAKIRQAQLQKIPYMLIIGDREQRAGAVAVRTR 570 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 MS+ I A Sbjct: 571 SGEDLGAMSVAAFIERARAEIEAK 594 >gi|313793980|gb|EFS42004.1| prolyl-tRNA synthetase [Propionibacterium acnes HL110PA1] gi|313801367|gb|EFS42618.1| prolyl-tRNA synthetase [Propionibacterium acnes HL110PA2] gi|313839912|gb|EFS77626.1| prolyl-tRNA synthetase [Propionibacterium acnes HL086PA1] gi|314963668|gb|EFT07768.1| prolyl-tRNA synthetase [Propionibacterium acnes HL082PA1] gi|315079518|gb|EFT51511.1| prolyl-tRNA synthetase [Propionibacterium acnes HL053PA2] gi|327451998|gb|EGE98652.1| prolyl-tRNA synthetase [Propionibacterium acnes HL092PA1] Length = 581 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 106/271 (39%), Positives = 155/271 (57%), Gaps = 6/271 (2%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 1 MSQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEMA 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 61 SIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDLY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y+ Sbjct: 121 SSYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYI 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RIF+RLG ++A SGP+GG S EF+ +A GE S + + D Sbjct: 181 RIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGEDTFVRSSGGYAANVEAVRVAVPDP 240 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + ++ P A D + + +SL Sbjct: 241 LPID------GLPEAEVVDTPDARTIESLVR 265 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 4/188 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 DV + D P+ + ARGIE+GHIF G KY+ + +GK V MG Sbjct: 395 GVIDVAEIREGDPAPDGSGELHLARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R VAA+ E + D KG+ WP VAP+ + ++ ++ + +I + L++ Sbjct: 455 SYGLGVSRAVAAIAEGTCDEKGLCWPREVAPYDVQVLATGKGTEILDE-ATRIASELAEA 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD G +FA +++LG P V+VG + + D VE++ R TG +S+ E + Sbjct: 514 GLEVLLDDRKASPGVKFADSEILGMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAV 572 Query: 436 NYASHRFS 443 Sbjct: 573 CAVLKEVR 580 >gi|318041155|ref|ZP_07973111.1| prolyl-tRNA synthetase [Synechococcus sp. CB0101] Length = 609 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 119/281 (42%), Positives = 160/281 (56%), Gaps = 11/281 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L+++P +AEI SHKL+LR G I + GIY++LPL + L ++AI+REE Sbjct: 1 MRVSRLMLVTLRDDPAEAEIPSHKLLLRAGYIRRVGSGIYAYLPLLWRVLQKISAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N GA+E +P LQ A+LW SGR+ Y M L DR + + GPTHEEV+T + Sbjct: 61 LNAAGALETLLPQLQPAELWQRSGRWAGYTAGEGIMFHLEDRQGRELGLGPTHEEVITAL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF K +Y M Sbjct: 121 AGDLLRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADEACLKQTYAAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-------FCSKDFMDF 230 +Y RIF R GL+++ + A+SG IGG S EF+V AD GE + + + Sbjct: 181 DQAYRRIFSRCGLRAVAVEADSGAIGGSASQEFMVTADAGEDLILASGDGRYAANQERAV 240 Query: 231 PIPSENTDFDDIISLNSIVEQWTAP-YAATSDVHNEKLFDS 270 +P+E E T P A D+ + FD Sbjct: 241 SLPAEAVPLPGGARAAGAGEDLTTPGQTAIDDLCSAHGFDP 281 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 104/196 (53%), Gaps = 4/196 (2%) Query: 254 APYAATSDVHNEKLFDSLPEN---KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 P + D+ + D + + ++RGIEVGHIF G KYS + ATF G++ Sbjct: 409 CPAPESLDLRAAQPGDRCLHDASQQLEASRGIEVGHIFQLGRKYSAALEATFTNEAGQEE 468 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + MG YGIG R+ A +E HD GI WP ++APF++ ++ D R+ E++YA Sbjct: 469 PLWMGCYGIGVSRLAQAAVEQHHDANGICWPTAIAPFEVIVVIANVADAAQRELGEQLYA 528 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 G DV DD E+ G +F ADLLG P +V+VG + +D KVE+ R G R D++ Sbjct: 529 EFQVAGMDVLLDDRTERAGVKFKDADLLGIPWRVVVG-RGAADGKVELVQRAGGERSDLA 587 Query: 431 LEEVINYASHRFSNNR 446 +V+ + R Sbjct: 588 AADVLAQLQGQLERER 603 >gi|298250750|ref|ZP_06974554.1| threonyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963] gi|297548754|gb|EFH82621.1| threonyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963] Length = 624 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 69/448 (15%), Positives = 152/448 (33%), Gaps = 41/448 (9%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L G+ + P G D + ++ Q G Sbjct: 203 YLWLLEESKKRDHRRLGQELDLFA-FSDLVGGGLPLFTPKGTLVRDLLEEFVQSLQEPLG 261 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + +P + DL+ SG ++ + +++ ++ ++ + P + T I+ S ++SY Sbjct: 262 YQRVHIPHITKNDLYKTSGHWEKFQEDIFHVSGKSGEDFCMKPMNCPHHTQIYASRMRSY 321 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 R LP ++ +RDEL + + +D TP+ + +++ + Sbjct: 322 RELPIRLSEVTTVYRDELPGTLHGLSRVRAITQDDAHVFCTPDQVQEEVLRIYSIIENFY 381 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G+ + + L E + + + + Sbjct: 382 KPFGM--------TLAVRLSLWDEEH------PEKYLGTPELWNSAQEQLRAVLRMKGIE 427 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 A Y D D+L +++ ++ F ++ + + G Sbjct: 428 WVEEVGEAAFYGPKIDF---TALDALERTWQLATIQLD----FNLPERF----NLEYMGP 476 Query: 306 DGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG V + +G++ +V+ + G W ++P + +I I D Sbjct: 477 DGHAARPVMLHRAVLGSVERFMSVLIEHYAGAFPTW---LSPVQAMIIPIADRH---LDY 530 Query: 365 CEKIYARLSKVG-------CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 ++ L V V D+ E + + A L P +++G K + +V Sbjct: 531 AYQVKQSLLDVRLSSARESIRVEVDEARESMQKKIRNAQLQKVPYMLVLGDKEAENGEVN 590 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 ++HR +S+ + Sbjct: 591 VRHRSGVNLGTLSVSALAERIKQEILTR 618 >gi|294628375|ref|ZP_06706935.1| threonyl-tRNA synthetase [Streptomyces sp. e14] gi|292831708|gb|EFF90057.1| threonyl-tRNA synthetase [Streptomyces sp. e14] Length = 659 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 65/448 (14%), Positives = 136/448 (30%), Gaps = 36/448 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y + + RD +L L + + G+ + P G + R Sbjct: 246 LKQYLDFLAEAEKRDHRKLGAELDLFS-FPDELGPGLAVFHPKGGVVRKVMEDYSRRRHE 304 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 +G ++ P + L+ SG Y + M +++ + + IF+S Sbjct: 305 VSGYEFVNTPHISKEHLFEISGHLPHYAEGMFPPIQFDEQNYRLKAMNCPMHNLIFKSRG 364 Query: 123 KSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR LP ++ +R E G+ RSR F D++ + + + + + Sbjct: 365 RSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDSHIYCTKEQMPQEL-DTLLTFV 423 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L + GL + + D S +FI + + + Sbjct: 424 LDLLRDYGLTEFELELST----RDDSDKFIGSDE-----------DWAEATEALRQAAEK 468 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 A Y + ++ D++ + ++S ++ + Sbjct: 469 QNLPLVPDPGGAAYYGPKI---SVQVRDAIGRSWQMSTIQVDFNQP--------KRFNLE 517 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + ADG + G++ V+ + G W V I + Sbjct: 518 YTAADGSRRQPVMIHRALFGSIERFFGVLLEHYAGAFPAWLAPVQAVGIPVG------DA 571 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 EK G V D +++ + A P +IVG ++ V ++ Sbjct: 572 HVGYLEKFALEAKSKGLRVEVDASSDRMQKKIRNAQKQKVPFMIIVGDDDMNAGTVSFRY 631 Query: 421 RLTGIREDMSLEEVINYASHRFSNNRPV 448 R + ++ + V Sbjct: 632 RDGSQENGIPRDQALAKLVDVVERRAQV 659 >gi|195472319|ref|XP_002088448.1| Aats-thr [Drosophila yakuba] gi|194174549|gb|EDW88160.1| Aats-thr [Drosophila yakuba] Length = 747 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 71/432 (16%), Positives = 147/432 (34%), Gaps = 40/432 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + + ++ E + G E+ Sbjct: 342 EEAAKRDHRKIGREQELF--FFHELSPGSCFFQPRGAHIYNTLMSFMKAEYRKRGFQEVI 399 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + +A LW+ SG + Y + M + P + IF + +S+R LP Sbjct: 400 SPNIYNAKLWMTSGHWQHYAENMFSFEAEKET-FALKPMNCPGHCLIFDNRNRSWRELPL 458 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + ++ G Sbjct: 459 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTPEQIKSEM-KGCLEFLHHVYTIFG 517 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 F ++ T + + + ++ Sbjct: 518 FS------------------FQLVLSTRPDNYLGELEQWNAAEKALAESLNEFGMPWKEN 559 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + + ++ F +++L A K Sbjct: 560 PGDGAFYGPKIDI---TIMDALKRAHQCATIQLD----FQLPIRFNLSYIA---DDGEKK 609 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + +G++ + A++ + WP ++P ++ ++ + + + Sbjct: 610 RPVIIHRAILGSVERMIAILT---ENFAGKWPFWLSPRQVMVVPVGP---AYDQYAQSVR 663 Query: 370 ARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L G D D G+ + + A L F ++VG K S + V ++ R + + Sbjct: 664 DQLHAAGFMSEADCDAGDTMNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGE 723 Query: 429 MSLEEVINYASH 440 +S+ E+I Sbjct: 724 VSVAELITKLQK 735 >gi|170781142|ref|YP_001709474.1| threonyl-tRNA synthetase [Clavibacter michiganensis subsp. sepedonicus] gi|169155710|emb|CAQ00831.1| threonine-tRNA synthetase [Clavibacter michiganensis subsp. sepedonicus] Length = 684 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 67/454 (14%), Positives = 132/454 (29%), Gaps = 47/454 (10%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 I + RD +L L + + G+ + P G + R G Sbjct: 260 RIEEALKRDHRRLGAELDLFS-FPDEIGSGLAVFHPKGGIIRREMEDYSRRRHETAGYEF 318 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTD 116 + P + ++L+ SG D Y M R P + + Sbjct: 319 VYSPHITKSNLFETSGHLDFYKDGMFPAMHLDEARNDEGEITRQGADYYLKPMNCPMHVL 378 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 I+RS +SYR LP ++ +R+E G+ R R DA+ F + Sbjct: 379 IYRSRQRSYRELPLRLFEFGTVYRNEKSGVIHGLTRVRGMTQDDAHIFTTRERMADEL-K 437 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 L + GL + + + S + + + Sbjct: 438 GTLEFVLSLLRDYGLDDFYLELST----------------KDPEKFVGSDEVWEEATETL 481 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 D A Y + + D++ ++S ++ F ++ Sbjct: 482 RQVAVDTGLELVPDPAGAAFYGPKI---SVQARDAIGRTWQMSTIQLD----FNLPERFG 534 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 L +A + V + G++ V+ + G +W V I + Sbjct: 535 LEYTA---NDGTRKQPVMIHRALFGSIERFFGVLTEHYAGAFPVWLSPVQVVGIPVA--- 588 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + + + RL G V D +++ + P Q+I G + Sbjct: 589 ---EDYEEYLGGVLDRLRAEGVRVQLDTSDDRMPKKIRTHTKARVPYQLIAGEDDRAAGS 645 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 V + R + + E + + + V+ Sbjct: 646 VSFRFRDGTQVNGVPVAEAVERITGAIARREQVV 679 >gi|194206357|ref|XP_001491149.2| PREDICTED: similar to threonyl-tRNA synthetase-like 2 [Equus caballus] Length = 754 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 76/447 (17%), Positives = 152/447 (34%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD + L H S G +LP G + + IREE Sbjct: 337 KMMKNWEKFQEEAKNRDHRKIGKEQELF--FFHDLSPGSCFFLPRGAFIYNTLMDFIREE 394 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ E+ P + ++ LW SG + Y + M D P + +F Sbjct: 395 YHQRNFTEVLSPNMYNSKLWEASGHWQHYSENMFTF-DIEKDTFALKPMNCPGHCLMFAH 453 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R +P F + R+EL G+ R R F DA+ F + + Sbjct: 454 RPRSWREMPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQ-IEEEIKGCLQ 512 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G F + T D Sbjct: 513 FLQSVYSTFGFS------------------FQLNLSTRPENFLGEIGLWDEAEKQLQNSL 554 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + A Y D+ K+ D++ + + ++ F +++L Sbjct: 555 MEFGKPWKMNPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRFNLTYV 607 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K + V + +G++ + A++ + G WP ++P ++ +I + Sbjct: 608 SK--DGDDKKNPVIIHRAILGSVERMIAILS---ENYGGKWPFWLSPRQVMVIPVGP--- 659 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C ++ + G D D + + A L + ++VG K +++ V + Sbjct: 660 TCEKYALQVSNEFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKTNNAVNV 719 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R I ++S+ I+ H + Sbjct: 720 RTRDNKIHGEISVTSAIDKLKHLKKSR 746 >gi|150015183|ref|YP_001307437.1| threonyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] gi|149901648|gb|ABR32481.1| threonyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] Length = 643 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 79/444 (17%), Positives = 153/444 (34%), Gaps = 36/444 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 FL L+E RD +L L T +G+ +P G K + + + +E+ + G Sbjct: 229 FLEALEEAKKRDHNKLGRELKLFTT-DENVGQGLPLLMPKGAKIVQLLQRWVEDEEEKRG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHIK 123 + P + +DL+ SG +D Y M +++D+ P I+ + Sbjct: 288 YLLTKTPLMAKSDLYKISGHWDHYKDGMFVLGDEEKDDEVFALRPMTCPFQYTIYNAEQH 347 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + + FR+E G++R R+F +TPE + + + Sbjct: 348 SYRDLPLRYGETSTLFRNEASGEMHGLIRVRQFT-LADGHLVVTPEQLEEEFKGVLELIQ 406 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + LG I +++ F + D + + D + Sbjct: 407 YLMGTLG------------IAEKITYRFSKWDPNNTEKYINDPDAWNKTQDTMRNILDHL 454 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y D+ + + + I+ + ++ Sbjct: 455 NINYVEADDEAAFYGPKLDLQFRNVH---GKEDTLFTVQIDFAL--------AERFDMSY 503 Query: 303 KGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 DG+ + IG A++ + +P ++P + ++ I Sbjct: 504 VDKDGEKKRPYIIHRSSIGCYERTLAMLI---EEYAGAFPTWLSPVQAKVLPISDK---Y 557 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D E + L G V D E+IG + A L P ++VG K ++++V ++ R Sbjct: 558 NDYAEAVTKALKNKGIRVETDYRAEKIGYKIREARLERTPYILVVGEKEAANNEVSVRSR 617 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + L+ I N Sbjct: 618 KNDDEGAVKLDAFIERIVKEIENK 641 >gi|24657723|gb|AAH39225.1| Threonyl-tRNA synthetase-like 2 [Mus musculus] Length = 790 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 80/448 (17%), Positives = 155/448 (34%), Gaps = 42/448 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + I +E RD + L H S G +LP G + + IREE Sbjct: 373 KMMKDWEKIQEEAKSRDHRKIGKEQELF--FFHDLSPGSCFFLPRGAFIYNALMDFIREE 430 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ E+ P + ++ LW SG + Y M D P + +F Sbjct: 431 YHKRNFTEVLSPNMYNSKLWETSGHWQHYSNNMFTF-DVEKDTFALKPMNCPGHCLMFAH 489 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R +P F + R+EL G+ R R F DA+ F + + + Sbjct: 490 RPRSWREMPVRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCMVEQ-IEEEIKGCLH 548 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E D Sbjct: 549 FLQSVYSTFGFSFQLN-LSTRPEHFLGEIE-----------------IWDEAERQLQNSL 590 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + I A Y D+ K+ D++ + + ++ F +++L Sbjct: 591 VEFGKPWKINPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRFNLTYV 643 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K+ V + +G++ + A++ + G WP ++P ++ +I + Sbjct: 644 SK--DGDDKNRPVIIHRAILGSVERMIAILS---ENYGGKWPLWLSPRQVMVIPVGP--- 695 Query: 360 VCRDACEKIYARLSKVGC--DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 C + ++ + G DV DD + + A L + ++VG K ++ V Sbjct: 696 ACENYALQVSKECFEEGFMADVDLDDS-CTLNKKIRNAQLAQYNFILVVGEKEKINNAVN 754 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ R I ++S+ VI + + Sbjct: 755 VRTRDNKIHGEISIASVIEKLKNLKKSR 782 >gi|186685902|ref|YP_001869098.1| threonyl-tRNA synthetase [Nostoc punctiforme PCC 73102] gi|186468354|gb|ACC84155.1| threonyl-tRNA synthetase [Nostoc punctiforme PCC 73102] Length = 611 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 75/441 (17%), Positives = 156/441 (35%), Gaps = 39/441 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD +L L G+ W P G + +++EQ + G + + Sbjct: 199 EEALRRDHRKLGKELGLFI-FSDLVGPGLPLWTPKGTLLRSTLEDFLKQEQVKRGYLSVV 257 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKA------MIYGPTHEEVMTDIFRSHIKS 124 P + DL+ SG + Y ++M L +++A + P + I++S ++S Sbjct: 258 TPHIARVDLFKTSGHWQKYKEDMFPLMADDEEAAAQEQGFVMKPMNCPFHIQIYKSELRS 317 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR LP + +R E G + D +TPE + + L + Sbjct: 318 YRELPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDSEFLSVVDLILSV 377 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F++L LK+ R D + S + D + + + Sbjct: 378 FNKLQLKNFKARLS--------------FRDPASDKYIGSDEVWDKAEGAIRRAVETLGM 423 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y D D+L ++ ++ + Sbjct: 424 EHFEGIGEAAFYGPKLDFI---FSDALDREWQLGTVQVDYNLP--------ERFELEYVA 472 Query: 305 ADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + V + G++ + ++ + +P +AP + L+ + D Sbjct: 473 EDGVRKRPVMIHRAPFGSLERLIGILI---EEYAGDFPLWLAPVQARLLPVG---DTQLD 526 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + A++ +G D G+++G Q A+ P+ +VG+K V + + I+ R + Sbjct: 527 FAKDVVAKMRALGIRAEVDTSGDRLGKQIRNAEKEKIPVMAVVGAKEVETNTLSIRTRAS 586 Query: 424 GIREDMSLEEVINYASHRFSN 444 G + ++EV++ + Sbjct: 587 GELGVIPVDEVVDKMKDAIAK 607 >gi|71021529|ref|XP_760995.1| hypothetical protein UM04848.1 [Ustilago maydis 521] gi|46100879|gb|EAK86112.1| hypothetical protein UM04848.1 [Ustilago maydis 521] Length = 759 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 78/452 (17%), Positives = 154/452 (34%), Gaps = 43/452 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+Y +L+ RD + L M H+ S G WLP G + + + ++ E Sbjct: 337 MSEYKQFLLEAAKRDHRKIGKEQELF--MFHELSPGSCFWLPHGARIYNTLQEFLKSEYR 394 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G E+ P + ++ LW SG + +Y +M + + + P + +F S Sbjct: 395 QRGFDEVVTPNMYNSKLWQTSGHWQNYKDDMF-VLGVDKEQFALKPMNCPGHCLMFASRD 453 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY+ LP + R+E G+ R R F DA+ F ++ + + F Sbjct: 454 RSYKELPLRLADFGVIHRNEASGALSGLTRVRRFCQDDAHIFCMSSQIEQEM-AGCFDFL 512 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 R++ G EF + T + + + D Sbjct: 513 ERVYGLFG------------------FEFKLELSTRPEKFLGDIETWNAAEARLGAALDK 554 Query: 242 II-SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + A Y D+ + D++ + + + ++ F ++ L Sbjct: 555 FVPGKWELNPGDGAFYGPKIDI---TISDAMRRHFQCATIQLD----FQLPQQFKLEYRT 607 Query: 301 TFK--GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G + V + +G++ A++ GK W + + N Sbjct: 608 AVSQGGETQAERPVMIHRAVVGSLERFIAILTEHFAGKWPFWLSPRQLLVVPVTN----- 662 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D + + RL G D + + ++ + +VG + + + V I Sbjct: 663 -TVFDYAKSVQQRLWDQGFFADVDLSDNTLPKKIRNGEIAQYNFVFVVGHEEMQTNSVNI 721 Query: 419 KHRLT----GIREDMSLEEVINYASHRFSNNR 446 ++R G E M L++ I S R Sbjct: 722 RNRDDVNQKGKAETMDLDKTITLLKALKSQRR 753 >gi|312139482|ref|YP_004006818.1| threonine-tRNA ligase thrs [Rhodococcus equi 103S] gi|311888821|emb|CBH48133.1| threonine-tRNA ligase ThrS [Rhodococcus equi 103S] Length = 683 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 58/441 (13%), Positives = 123/441 (27%), Gaps = 49/441 (11%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + G+ + P G + R+ G + Sbjct: 257 EAERRDHRKLGAELDLFS-FPDELGSGLPVFHPKGGIIRQEMENYSRKRHVEEGYEFVYS 315 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDIFR 119 P + L+ SG D Y M + + P + + +F Sbjct: 316 PHITKGHLYEVSGHLDWYKDGMFPAMHIDEELNEDGTVRKPGQDYYLKPMNCPMHNLVFG 375 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 S +SYR LP ++ +R E G+ R R DA+ + + Sbjct: 376 SRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTKEQMRDEL-TTTL 434 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L + GL + + + + + Sbjct: 435 KFVLGLLKDYGLDDFYLELST----------------KNPDKFVGDDALWEEATETLREV 478 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + A Y + ++ D+L + ++S ++ F ++ Sbjct: 479 GEASGLNLVPDPGGAAFYGPKI---SVQVQDALGRSWQMSTIQLD----FNLPERFD--- 528 Query: 299 SATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + G+DG + G++ V+ + G W V I + Sbjct: 529 -LEYTGSDGTKQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPVA----- 582 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + D + +L G D +++ + P ++ G + V V Sbjct: 583 -EAFEDHLFDVVKQLKAAGVRAEVDVSDDRMQKKIRNHTTQKVPFMLLAGERDVEAGAVS 641 Query: 418 IKHRLTGIREDMSLEEVINYA 438 + R + + + + Sbjct: 642 FRFRDGTQVNGVPVADAVETI 662 >gi|314923910|gb|EFS87741.1| prolyl-tRNA synthetase [Propionibacterium acnes HL001PA1] gi|314966030|gb|EFT10129.1| prolyl-tRNA synthetase [Propionibacterium acnes HL082PA2] gi|314981915|gb|EFT26008.1| prolyl-tRNA synthetase [Propionibacterium acnes HL110PA3] gi|315090730|gb|EFT62706.1| prolyl-tRNA synthetase [Propionibacterium acnes HL110PA4] gi|315094978|gb|EFT66954.1| prolyl-tRNA synthetase [Propionibacterium acnes HL060PA1] gi|315104203|gb|EFT76179.1| prolyl-tRNA synthetase [Propionibacterium acnes HL050PA2] gi|327328087|gb|EGE69856.1| proline--tRNA ligase [Propionibacterium acnes HL103PA1] Length = 581 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 106/271 (39%), Positives = 155/271 (57%), Gaps = 6/271 (2%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 1 MSQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEMA 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 61 NIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDLY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y+ Sbjct: 121 SSYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYI 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RIF+RLG ++A SGP+GG S EF+ +A GE S + + D Sbjct: 181 RIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGEDTFVRSSGGYAANVEAVRMAVPDP 240 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + ++ P A D + + +SL Sbjct: 241 LPID------GLPEAEVVDTPDARTIESLVR 265 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 4/188 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 DV + D P+ + ARGIE+GHIF G KY+ + +GK V MG Sbjct: 395 GVIDVAEIREGDLAPDGSGELHLARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R VAA+ E + D KG+ WP VAP+ + ++ ++ + +I + L++ Sbjct: 455 SYGLGVSRAVAAIAEGTCDEKGLCWPREVAPYDVQVLATGKGTEILDE-ATRIASELAEA 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD G +FA +++LG P V+VG + + D VE++ R TG +S+ E + Sbjct: 514 GLEVLLDDRKASPGVKFADSEILGMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAV 572 Query: 436 NYASHRFS 443 Sbjct: 573 CAVLKEVR 580 >gi|195147146|ref|XP_002014541.1| GL19239 [Drosophila persimilis] gi|198473694|ref|XP_001356405.2| GA18821 [Drosophila pseudoobscura pseudoobscura] gi|194106494|gb|EDW28537.1| GL19239 [Drosophila persimilis] gi|198138068|gb|EAL33469.2| GA18821 [Drosophila pseudoobscura pseudoobscura] Length = 754 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 73/432 (16%), Positives = 148/432 (34%), Gaps = 40/432 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + I+ E + G E+ Sbjct: 349 EEAAKRDHRKIGREQELF--FFHELSPGSCFFQPRGAHIYNTLMGFIKSEYRKRGFQEVI 406 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + +A LW+ SG + Y + M +K P + IF + +S+R LP Sbjct: 407 SPNIYNAKLWMTSGHWQHYAENMFSFEAEKEK-FALKPMNCPGHCLIFDTRNRSWRELPL 465 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + ++ G Sbjct: 466 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEM-KGCLEFLKHVYTIFG 524 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 F ++ T + + + + ++ Sbjct: 525 FT------------------FQLVLSTRPEKYLGELEQWNDAEKALEESLNEFGMPWKEN 566 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + + ++ F +++L A K Sbjct: 567 PGDGAFYGPKIDI---TIMDALKRAHQCATIQLD----FQLPIRFNLNYIA---DDGEKK 616 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + +G++ + A++ + WP ++P ++ ++ + + + Sbjct: 617 RPVIIHRAILGSVERMIAILT---ENYAGKWPFWLSPRQVMVVPVGP---AYDQYAQTVK 670 Query: 370 ARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L G D D G+ + + A L F ++VG K S + V ++ R + + Sbjct: 671 DQLHAAGFMSEADCDAGDTMNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGE 730 Query: 429 MSLEEVINYASH 440 +S+ E+I Sbjct: 731 VSVSELITKLQK 742 >gi|269795644|ref|YP_003315099.1| prolyl-tRNA synthetase, family II [Sanguibacter keddieii DSM 10542] gi|269097829|gb|ACZ22265.1| prolyl-tRNA synthetase, family II [Sanguibacter keddieii DSM 10542] Length = 591 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 99/239 (41%), Positives = 141/239 (58%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S F+ L+E+P DAE+ASH+L++R G I + + GIY+WLPLG + L V A++REE Sbjct: 4 RLSTLFVRTLREDPADAEVASHRLLVRAGYIRRAAPGIYTWLPLGLRVLAKVEAVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA E+ P L + + +GR+ YG + RL DR D + PTHEE+ T + + Sbjct: 64 QAAGAQEVHFPALLPREPYEATGRWTEYGPNLFRLKDRRDNDYLLAPTHEEMFTLLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T +Q+Q K+RDE RPR G++R REF+MKDAYSFD+ G + SY +Y Sbjct: 124 YSSYKDLPVTLFQVQTKYRDEARPRAGLIRGREFVMKDAYSFDVDDAGLEASYLVQRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 +IF RLGL+ + + A SG +GG S EF+ GE S + + T Sbjct: 184 EKIFTRLGLEYVVVAATSGAMGGSRSEEFLHPTAIGEDTFVRSPGGYAANVEAVTTIVP 242 Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 57/202 (28%), Positives = 82/202 (40%), Gaps = 31/202 (15%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ ARGIE+GHIF G KY+ + +GK V MG Sbjct: 403 GTVECAEVRAGDPAPDGSGPLELARGIEIGHIFQLGRKYADALGLKVLDVNGKQVTVTMG 462 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R +AA+ E++HD KG+ WP VAP + ++ D A E I LS Sbjct: 463 SYGIGVTRALAALAEANHDEKGLAWPAHVAPAHVHVVATG-KDPAVFAAAETIAQELSAQ 521 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKF-------------VSDSKVEIKHR 421 +V +DD G +FA A ++D VE++ R Sbjct: 522 RVEVLYDDRPKVSPGVKFADA--------------ELLGVPLVVVVGRGLADGVVEVRPR 567 Query: 422 LTGIREDMSLEEVINYASHRFS 443 + G + + E Sbjct: 568 VGGEAVSVPVAEAAQRVVEMVE 589 >gi|302554518|ref|ZP_07306860.1| prolyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736] gi|302472136|gb|EFL35229.1| prolyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736] Length = 566 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 102/239 (42%), Positives = 144/239 (60%), Gaps = 1/239 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ L+++P DAE+ SHKL++R G + + + GI+SWLPLG+K L NV I+REE Sbjct: 8 RMSQLLAKTLRDDPADAEVLSHKLLVRAGYVRRTAAGIWSWLPLGKKVLANVERIVREEM 67 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P + + + +GR++ YG E+ RL DR + GPTHEE+ T + + Sbjct: 68 DAVGAQEVLLPAILPREPYEATGRWEEYGPELFRLQDRKGGDYLLGPTHEEIFTLLVKDQ 127 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REFLMKD+YSFD EG SY +Y Sbjct: 128 ASSYKDLPVILYQIQNKYRDEARPRAGILRGREFLMKDSYSFDTDDEGLAQSYALHREAY 187 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 +IF RLGL A +G +GG S EF+ A+ GE F DF +E ++ Sbjct: 188 QKIFARLGLDYRICAATAGAMGGSKSEEFLAPAEAGE-DTFADCPNCDFAANTEAITYE 245 Score = 137 bits (345), Expect = 4e-30, Method: Composition-based stats. Identities = 63/177 (35%), Positives = 92/177 (51%), Gaps = 6/177 (3%) Query: 266 KLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 + D P+ V R IE+GHIF G KY+ + G +GK V MGSYGIG R Sbjct: 392 QEGDPCPKCGTGLVLDRAIEIGHIFQLGRKYADALKLDVLGQNGKPVRVTMGSYGIGVSR 451 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 VAA+ E S D KG+ WP VAP + + A + + I +L+ G V DD Sbjct: 452 AVAALAEQSADDKGLCWPKEVAPADVH--VVAAGKALQTELALDISGKLAAAGVRVLVDD 509 Query: 384 M-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 G G +F ++L+G P ++ G + +D VE+K R TG RE++++EE + + Sbjct: 510 RAGVSPGVKFTDSELIGVPQILVAGRR-AADGVVELKDRRTGEREELTVEEAVARLT 565 >gi|300741607|ref|ZP_07071628.1| threonine--tRNA ligase [Rothia dentocariosa M567] gi|300380792|gb|EFJ77354.1| threonine--tRNA ligase [Rothia dentocariosa M567] Length = 677 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 70/443 (15%), Positives = 141/443 (31%), Gaps = 32/443 (7%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L + G+ P G + +R Sbjct: 253 EYKHRIAEAERRDHRRLGKELDLFS-FPKNIGPGLPVIHPKGGVIKREMEDYVRARHIAE 311 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G +S P + DL+ SG Y M + ++ + + +I+RS +S Sbjct: 312 GFQYVSTPHISKEDLFYTSGHLPYYADGMFPAMELDNGNYRLKAMNCPMHNEIYRSRGRS 371 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP F++ +RDE G+ R R D++S+ + + L Sbjct: 372 YRELPLRFFEFGTVYRDEKSGVLQGLTRVRMITQDDSHSYVTKEQAPDE-VRHLLNFMLS 430 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + G+ + + GD +FI + + + Sbjct: 431 LLEDFGMTDFYLELSTRDTEGDKKDKFIGTDEQ-----------WEQATAVLEQVAKETG 479 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 A Y + + D++ ++S + FG ++ Sbjct: 480 LELVPDPGGAAFYGPKI---SVQAKDAIGRTWQMSTVQYDFNQPSRFG--------LEYQ 528 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 ADG + S G++ V+ + +P ++P ++ + + + Sbjct: 529 AADGSIQEPVMIHSAKFGSIERFLGVLT---EHYAGAFPAWLSPVQVICVPVA---EAFN 582 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D +I +L + G V D ++ + A P +I G + V + R Sbjct: 583 DYMTEIADKLREQGVRVEVDYGSDRFTKKIRTASTEKVPFILIAGGEDAEAGAVSFRFRG 642 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + ++E + + N Sbjct: 643 NKQENGVPVDEAVVRIVNHIRNR 665 >gi|148273002|ref|YP_001222563.1| threonyl-tRNA synthetase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830932|emb|CAN01876.1| thrS [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 684 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 67/454 (14%), Positives = 132/454 (29%), Gaps = 47/454 (10%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 I + RD +L L + + G+ + P G + R G Sbjct: 260 RIEEALKRDHRRLGAELDLFS-FPDEIGSGLAVFHPKGGIIRREMEDYSRRRHETAGYEF 318 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTD 116 + P + ++L+ SG D Y M R P + + Sbjct: 319 VYSPHITKSNLFETSGHLDFYKDGMFPAMHLDEARNDEGEITRQGADYYLKPMNCPMHVL 378 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 I+RS +SYR LP ++ +R+E G+ R R DA+ F + Sbjct: 379 IYRSRQRSYRELPLRLFEFGTVYRNEKSGVIHGLTRVRGMTQDDAHIFTTRERMADEL-K 437 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 L + GL + + + S + + + Sbjct: 438 GTLEFVLSLLRDYGLDDFYLELST----------------KDPEKFVGSDEVWEEATETL 481 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 D A Y + + D++ ++S ++ F ++ Sbjct: 482 RQVAVDTGLELVPDPAGAAFYGPKI---SVQARDAIGRTWQMSTIQLD----FNLPERFG 534 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 L +A + V + G++ V+ + G +W V I + Sbjct: 535 LEYTA---NDGTRKQPVMIHRALFGSIERFFGVLTEHYAGAFPVWLSPVQVVGIPVA--- 588 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + + + RL G V D +++ + P Q+I G + Sbjct: 589 ---EDYEEYLGGVLDRLRAEGVRVQLDTSDDRMPKKIRTHTKARVPYQLIAGEDDRAAGS 645 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 V + R + + E + + + V+ Sbjct: 646 VSFRFRDGTQVNGVPVAEAVERITGAIARREQVV 679 >gi|47575750|ref|NP_001001219.1| threonyl-tRNA synthetase [Xenopus (Silurana) tropicalis] gi|301626626|ref|XP_002942489.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Xenopus (Silurana) tropicalis] gi|45709710|gb|AAH67949.1| threonyl-tRNA synthetase-like 2 [Xenopus (Silurana) tropicalis] Length = 721 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 74/449 (16%), Positives = 156/449 (34%), Gaps = 44/449 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD + L H+ S G +LP G + + A IR+E Sbjct: 304 KMLKEWEKFQEEAKNRDHRKIGREQELF--FFHELSPGSCFFLPKGAYIYNQLIAFIRQE 361 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW SG + Y + M + P + +F Sbjct: 362 YRKRGFQEVVTPNVYNSKLWQTSGHWQHYSENMFSFEVEKEI-FALKPMNCPGHCLMFDH 420 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + + Sbjct: 421 RPRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQ-IEEEIKSCLD 479 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 +++ G + P E A+ Sbjct: 480 FLRAVYNVFGFTFKLN-LSTRPEKFLGDIEVWNQAEK-----------------QLENSL 521 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 522 NEFGEKWVLNPGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 570 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 571 LTYVSHDGDDKKRPVIIHRAILGSVERMIAILT---ENFGGKWPLWLSPQQVMVVPVGP- 626 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +++ + + G D D G + + A L + +++G K + V Sbjct: 627 --TCDEYAQQVREQFHRAGLMTDVDLDPGCTLNKKIRNAQLAQYNFILVIGEKEKASGTV 684 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 I+ R + + ++ E I + Sbjct: 685 NIRTRDNKVHGERTIAETIERLLQLKDSR 713 >gi|157165430|ref|YP_001465955.1| threonyl-tRNA synthetase [Campylobacter concisus 13826] gi|171855003|sp|A7ZAZ7|SYT_CAMC1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|112801821|gb|EAT99165.1| threonyl-tRNA synthetase [Campylobacter concisus 13826] Length = 606 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 78/437 (17%), Positives = 149/437 (34%), Gaps = 40/437 (9%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 I + RD ++ L T + G+ WLP G + + ++ + G + Sbjct: 205 IEEAKKRDHRKLGVEMKLFT-FDEEVGGGLPIWLPNGGRLRSKLEQLLYKAHRDRGYEPV 263 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P L AD+W SG Y +Y + M ++ P + +++S I+SYR+LP Sbjct: 264 RGPELLKADVWRRSGHYANYKENM-YFTTIDETEYGIKPMNCVGHIKVYQSDIRSYRDLP 322 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 F++ + R E G+ R REF D++ F + P K + ++ I Sbjct: 323 LKFFEYGVVHRHEKSGVLHGLFRVREFAQDDSHIFCM-PSQIKENILEILKFAGTIMENF 381 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 G T + + D + D+ I Sbjct: 382 GFHYEMEI------------------STKPAKAIGGDEIWDTATKALKEALDENGFKYGI 423 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 E A Y D+ K+ D+L + ++ F ++ + A+ + Sbjct: 424 DEGGGAFYGPKIDI---KITDALKRKWQCGTIQVD----FNLPERFD----LGYIDANNE 472 Query: 309 DHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + +G+ ++ + + + I D ++ Sbjct: 473 RQRPVMLHRALLGSFERFIGILLEHT------AGELPFFIAPTQVVIVPISDAHLDYAKE 526 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 I L K+ D E + + A+ P+ V++G V++ V ++ R + Sbjct: 527 ISRELRKINVDSEIASKNESLNKRIRTAEKQRVPMIVVLGDNEVANKSVALRDRQARTQS 586 Query: 428 DMSLEEVINYASHRFSN 444 DMSL E +N + S Sbjct: 587 DMSLAEFVNLTKEKLSE 603 >gi|163760291|ref|ZP_02167374.1| threonyl-tRNA synthetase [Hoeflea phototrophica DFL-43] gi|162282690|gb|EDQ32978.1| threonyl-tRNA synthetase [Hoeflea phototrophica DFL-43] Length = 668 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 76/449 (16%), Positives = 149/449 (33%), Gaps = 46/449 (10%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD ++ L + G+ W G K N+ A +R Sbjct: 234 YLHMLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHSKGWKMFQNLLAYMRRRLEN-D 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEML-----------RLADRNDKAMIYGPTHEEVM 114 E++ P + LW SG + Y + M + +++ P + Sbjct: 291 YEEVNAPQILDKSLWETSGHWGWYQENMFAVKSAHAFTNPDDEEADNRIFALKPMNCPGH 350 Query: 115 TDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHS 173 IF+ +KSYR+LP + R E G+MR R F DA+ F + Sbjct: 351 VQIFKHGLKSYRDLPVRLAEFGNVHRYEPSGALHGLMRVRAFTQDDAHVFCTEEQLEAEC 410 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 + ++ G + + ++ + P + A+ +V + Sbjct: 411 LKIN-DLMMSVYSDFGFEEVVVKLATRPEKRVGTDAMWDHAEDILRKVL-------DKMA 462 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 +E+ + I E Y + L D++ + + ++ FG Sbjct: 463 AESGGRIKVG----INEGEGTFYGPKFEY---TLRDAIGRDWQCGTTQVDFNLPERFG-- 513 Query: 294 YSLPMSATFKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 A + G K V + G++ ++ SH G +W + ++ Sbjct: 514 ------AFYIGADSEKKQPVMVHRAICGSLERFLGILIESHAGHMPLWFAPLQVVVATIT 567 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 D + RL G V D E+I + + P+ ++ G + Sbjct: 568 ------SEADDYGAAVAQRLRDAGLQVETDFRNEKINYKVREHSVAKVPVILVCGMREAE 621 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYASHR 441 + V ++ + + MSL + I + Sbjct: 622 EQTVNVRRLGSRDQVSMSLADAIAKLAEE 650 >gi|21672408|ref|NP_660475.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|22654285|sp|P46244|SYT_BUCAP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|21623017|gb|AAM67686.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 642 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 74/434 (17%), Positives = 133/434 (30%), Gaps = 40/434 (9%) Query: 14 NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 RD L L + + S G+ W G + + +RE+ E+ P Sbjct: 240 KKRDHRKIGKLLNLY--HMQKESPGMIFWHNNGWIIFNELEIFVREKLKEYKYKEVKTPL 297 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 L +W +SG +D+Y + ++ P + IF +KSYR+LP Sbjct: 298 LIDKSIWQKSGHWDNYQDAIFT-TSSENREYCIKPMNCPGHVQIFNCGLKSYRDLPIRMA 356 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 + R+E G+MR R F DA+ F + N ++ K Sbjct: 357 EFGSCHRNESSGSLHGLMRIRNFTQDDAHIFCTQEQLRYE-INNCIKMIYDLYSTFNFKK 415 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 I ++ + P A+ + V + E Sbjct: 416 ILVKFSTRPKKRIGDESVWDQAEKDLSDVLI-----------------ENNLKFEHQEGE 458 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD-HY 311 A Y + L DSL N + ++ FY + + Sbjct: 459 GAFYGPKIEF---VLQDSLDRNWQCGTIQLD----FYLPIRLRSF----YIDEHNHQKIP 507 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + + +G++ ++ GK W + I + + +KI Sbjct: 508 IIIHRAILGSIERFIGILIEEFSGKLPTW------LSPIQVVILSITDSHINYVKKIVQH 561 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 S + V D E+IG + L P +I G K + K+ ++ R + + Sbjct: 562 FSDINIRVESDLRNEKIGFKIREHTLRQIPYILICGEKEIKSKKISVRTRNGYNLGIIDI 621 Query: 432 EEVINYASHRFSNN 445 + I Sbjct: 622 DCFIKKLQKEIFTR 635 >gi|54026044|ref|YP_120286.1| prolyl-tRNA synthetase [Nocardia farcinica IFM 10152] gi|81822939|sp|Q5YSB9|SYP_NOCFA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|54017552|dbj|BAD58922.1| putative prolyl-tRNA synthetase [Nocardia farcinica IFM 10152] Length = 585 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 128/436 (29%), Positives = 187/436 (42%), Gaps = 48/436 (11%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+++P DAE+ SHKL++R G + + + G+YSWLPLG + L V ++R E Sbjct: 4 RLSHLFLRTLRDDPADAEVPSHKLLVRAGYVRRVAPGVYSWLPLGLRVLRKVEDVVRAEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+S+P L D + + R+ YG + RL DR + GPTHEE+ + Sbjct: 64 NAIGGQEISLPALLPRDPYETTNRWTEYGDSLFRLHDRKGADYLLGPTHEELFALTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T YQIQ K+RDE RPR G++R REF+MKD+YSFDL +G K SYN +Y Sbjct: 124 YNSYKDLPVTLYQIQTKYRDEERPRAGILRGREFVMKDSYSFDLDEDGLKASYNAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGET-QVFCSKDFMDFPIPSENTDFD 240 RIF RLG+K + + A SG +GG S EF+ + GE V C + + + T Sbjct: 184 QRIFDRLGVKYVIVAATSGAMGGSASEEFLADSPVGEDTYVICRESGYAANVEAVVTPAP 243 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + + P A D + SL E G FG + + Sbjct: 244 EPQPIEGR------PAAVVHDTPDTPTIASLVE------WANAAGIAEQFGRPVTAADTL 291 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + + GIG D + + + + D Sbjct: 292 KNVMVKLRHPDGKTEIVGIGVP----------GDREVDDKRLGASVEPAEVELLTDADFA 341 Query: 361 CRDACEKIY---ARLSKVGCDVFWDDM----------GEQIGSQFAVADLLGFPLQVIVG 407 K Y L + G D + G ++G +I G Sbjct: 342 ANPFLVKGYIGPKALQENGIRYLVDPRVGTGTAWITGADSPGK-----HVVG----LIAG 392 Query: 408 SKFVSDSKV---EIKH 420 F D + E++ Sbjct: 393 RDFTPDGTIEAAEVRD 408 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 65/173 (37%), Positives = 95/173 (54%), Gaps = 4/173 (2%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ + +ARGIE+GHIF G KY+ G +GK + MG Sbjct: 399 GTIEAAEVRDGDPSPDGRGTLEAARGIEIGHIFQLGYKYTDAFEVDVLGENGKPVRLIMG 458 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VA + E HD KG+ WP +VAPF + ++ D+ R E++ A L Sbjct: 459 SYGIGVSRMVAVIAEQQHDEKGLRWPAAVAPFDVHVVVAN-KDEAARTGAEQVVAGLDAQ 517 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 G DV +DD G +F A+LLG P V++G + +D VE+++R TG E+ Sbjct: 518 GLDVLFDDRTASPGVKFKDAELLGMPWVVVIG-RGWADGTVELRNRFTGEAEN 569 >gi|327446413|gb|EGE93067.1| prolyl-tRNA synthetase [Propionibacterium acnes HL013PA2] Length = 581 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 106/271 (39%), Positives = 156/271 (57%), Gaps = 6/271 (2%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 1 MSQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEMA 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 61 SIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDLY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y+ Sbjct: 121 SSYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYI 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RIF+RLG ++A SGP+GG S EF+ +A +GE S + + D Sbjct: 181 RIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAASGEDTFVRSSGGYAANVEAVRMAVPDP 240 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + ++ P A D + + +SL Sbjct: 241 LPID------GLPEAEVVDTPDARTIESLVR 265 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 4/188 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 DV + D P+ + ARGIE+GHIF G KY+ + +GK V MG Sbjct: 395 GVIDVAEIREGDPAPDGSGELHLARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R VAA+ E + D KG+ WP VAP+ + ++ ++ + +I + L++ Sbjct: 455 SYGLGVSRAVAAIAEGTCDEKGLCWPREVAPYDVQVLATGKGTEILDE-ATRIASELAEA 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD G +FA +++LG P V+VG + + D VE++ R TG +S+ E + Sbjct: 514 GLEVLLDDRKASPGVKFADSEILGMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAV 572 Query: 436 NYASHRFS 443 Sbjct: 573 CAVLKEVR 580 >gi|297191728|ref|ZP_06909126.1| prolyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486] gi|297151037|gb|EDY65325.2| prolyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486] Length = 691 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 106/263 (40%), Positives = 154/263 (58%), Gaps = 4/263 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE SHKL++R G + +++ GI+SWLPLG++ L+NV ++REE Sbjct: 133 RMSRLMVKTLRDDPADAETLSHKLLVRAGYVRRNAAGIWSWLPLGKRVLENVTRVVREEM 192 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + +GR++ YG E+ RL DR + GPTHEE+ T + + Sbjct: 193 DAIGAQEVLLPALLPKEPYEATGRWEEYGAELFRLKDRKGADYLLGPTHEEIFTQLVKDQ 252 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF MKD+YSFD + EG SY +Y Sbjct: 253 CTSYKDLPVILYQIQTKYRDEARPRSGILRGREFQMKDSYSFDTSDEGLAESYALHREAY 312 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF-- 239 +RIF RLGLK + A SG +GG S EF+ A GE D+ +E F Sbjct: 313 VRIFERLGLKHKIVSAVSGAMGGSASEEFLAPAPAGEDTFVYCPSC-DYAANTEAVTFAL 371 Query: 240 -DDIISLNSIVEQWTAPYAATSD 261 + + VE+ P T + Sbjct: 372 APVEGAEHGPVEELDTPDTPTIE 394 Score = 133 bits (335), Expect = 5e-29, Method: Composition-based stats. Identities = 54/174 (31%), Positives = 83/174 (47%), Gaps = 6/174 (3%) Query: 269 DSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P R IE+GHIF G KY+ G +GK V MGSYG+G R VA Sbjct: 520 DPCPSCGTGLKLDRAIEIGHIFQLGRKYADAFQLDVLGQNGKPVRVTMGSYGVGVSRAVA 579 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-G 385 A+ E + D +G+ WP +AP + + A + + + +L G V DD G Sbjct: 580 ALAEQTADEQGLCWPREIAPADVH--VVAAGKALQTELALDVAEQLGAAGLRVLVDDRAG 637 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 G +F A+L+G P ++ G + +E+K R TG RE++++ + + Sbjct: 638 VSPGVKFTDAELIGVPKILVAGRRSAE-GVLELKDRRTGEREELTVADAVARLR 690 >gi|297156817|gb|ADI06529.1| prolyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1] Length = 566 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 112/272 (41%), Positives = 152/272 (55%), Gaps = 4/272 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ L L+E+P DAE ASHKL++R G + + S GI++WLP+G+K L+NV I+REE Sbjct: 6 RMSRLMLKTLREDPADAETASHKLLVRAGYVRRTSAGIWTWLPIGKKVLENVARIVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + SGR++ YG + R+ DR + GPTHEE+ T + Sbjct: 66 DAIGAQEVLLPALLPREPYEASGRWEEYGDLLFRIKDRKGADYLLGPTHEEIFTQTVKDQ 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR GV+R REF MKD+YSFD T EG SY +Y Sbjct: 126 CTSYKDLPVILYQIQTKYRDEARPRSGVLRGREFQMKDSYSFDTTDEGLAESYRLHREAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF-- 239 RIF RLGL + A SG +GG S EF+ A GE + D+ +E Sbjct: 186 QRIFERLGLDYRIVSAISGAMGGSASEEFLAPAAAGEDTFVDCPNC-DYAANTEAVTLAL 244 Query: 240 -DDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 + + VE+ P T D E L Sbjct: 245 TPVEGAEHGPVEELDTPDTPTIDTLAEHLNIP 276 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 63/182 (34%), Positives = 91/182 (50%), Gaps = 6/182 (3%) Query: 261 DVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 DV + D P R IE+GHIF G KY+ G +GK V MGSYG Sbjct: 387 DVVVVRPGDPCPRCGAGIELDRAIEIGHIFQLGRKYADTFQLDVLGQNGKPVRVTMGSYG 446 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R VAA+ E +HD G+ WP VAP + + A + + ++ +L G Sbjct: 447 IGVSRAVAALAEQTHDESGLCWPREVAPADVH--IVAAGKALQTELALELADKLGTAGVR 504 Query: 379 VFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 V DD G G +F A+L+G P ++VG + D VE+K R TG RE++ ++E ++ Sbjct: 505 VMVDDRAGVSPGVKFTDAELIGVPTILVVG-RGAKDGVVELKDRRTGEREELPVDEALSR 563 Query: 438 AS 439 + Sbjct: 564 LT 565 >gi|313816766|gb|EFS54480.1| prolyl-tRNA synthetase [Propionibacterium acnes HL059PA1] Length = 581 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 106/271 (39%), Positives = 153/271 (56%), Gaps = 6/271 (2%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+ F+ L+E P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 1 MSQLFVRTLREAPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEMA 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 61 SIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDLY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY+ LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y+ Sbjct: 121 SSYKALPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYI 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RIF+RLG ++A SGP+GG S EF+ +A GE S + + D Sbjct: 181 RIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGEDTFVRSSGGYAANVEAVRMAVPDP 240 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + ++ P A D + + +SL Sbjct: 241 LPID------GLPEAEVVDTPDARTIESLVR 265 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 4/188 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 DV + D P+ + ARGIE+GHIF G KY+ + +GK V MG Sbjct: 395 GVIDVAEIREGDPAPDGSGELHLARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R VAA+ E + D KG+ WP VAP+ + ++ ++ + +I + L++ Sbjct: 455 SYGLGVSRAVAAIAEGTCDEKGLCWPREVAPYDVQVLATGKGTEILDE-ATRIASELAEA 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD G +FA +++LG P V+VG + + D VE++ R TG +S+ E + Sbjct: 514 GLEVLLDDRKASPGVKFADSEILGMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAV 572 Query: 436 NYASHRFS 443 Sbjct: 573 CAVLKEVR 580 >gi|153004735|ref|YP_001379060.1| threonyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5] gi|152028308|gb|ABS26076.1| threonyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5] Length = 681 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 72/445 (16%), Positives = 144/445 (32%), Gaps = 44/445 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD L L H+ + G WLP G + + +R ++ G Sbjct: 266 LARMEEVRKRDHRKLGPALGLFA--FHEVAPGAAFWLPNGTTLYNVLEDAMRRLVSKGGY 323 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA---------MIYGPTHEEVMTDI 117 E+ P L + LW +SG + Y + M + D+ M P + I Sbjct: 324 QEVKTPLLFNKRLWEQSGHWGVYRENMFLVFDKESDPALPVDERLSMSLKPMNCPSHHLI 383 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++ +SYR+LP ++ + R+EL G + +D L +++ Sbjct: 384 YKMGKRSYRDLPIRYFTVDTLHRNELSGSLGGLTRVRQFAQDDAHLYLMESQIPEEVSRI 443 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 ++ GL+ + + P+ D + Sbjct: 444 VELMKTVYGAFGLEF-SLLFSTRPV--------------KPEDRIGDDALWDKAEGALRA 488 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 D I + A Y D + DSL + ++ Sbjct: 489 ALDRIGLPWQLNPGDGAFYGPKIDF---VVTDSLGRKWQTCTIQLDYAAP--------ER 537 Query: 298 MSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 T+ G D +H + G+ A++ + +P +AP + ++ + Sbjct: 538 FDLTYVGDDNHEHRPVVIHRAVYGSFERFIAILT---EHYAGAFPAWLAPVQARVVTVSD 594 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + ++ A+L+ G V D+ +++G++ A L P +++G K V V Sbjct: 595 RFEGW---AREVQAKLATAGWRVELDESSDKLGAKIRNAQLAKIPFALVIGEKEVEAQGV 651 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 + + M L+ Sbjct: 652 APRRHGGEDLKTMPLDAFEALLRRE 676 >gi|110668486|ref|YP_658297.1| threonyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790] gi|121687233|sp|Q18H54|SYT_HALWD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|109626233|emb|CAJ52691.1| threonine--tRNA ligase [Haloquadratum walsbyi DSM 16790] Length = 642 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 81/444 (18%), Positives = 148/444 (33%), Gaps = 44/444 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRT 64 + + RD +L L + I G+ + P G+K L+ +++ R Sbjct: 231 FLERRKKAKERDHRKIGQELDLFS--IPDITGPGLPLYHPDGKKILNELSSFARSLNLEA 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P L +LW +SG Y++Y +M L D +D+ P + IF H S Sbjct: 289 GYEPVETPHLFRTELWKQSGHYENYVDDMF-LLDVSDEEYGLKPMNCPGHATIFDQHSWS 347 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP +++ +R E R G+ R F + D + F + + + M Y Sbjct: 348 YRDLPVRYFEDGKVYRKEQRGELSGLSRVWSFTIDDGHLFCQPEQIEQEVTHVMDAIYSV 407 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ + E V T + + + + + Sbjct: 408 -------------LDTFGL------EAHVALATRPEKSVGGDEIWENAETQLRSVLESQN 448 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y D E D+L ++ F ++ T+ Sbjct: 449 IDYDLEPGDGAFYGPKIDFAFE---DALGRQWDGPTVQLD----FNMPDRF----ELTYT 497 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G D DH + G+ V+ +GK +W + I Sbjct: 498 GEDNTDHQPVMIHRALYGSYERFFMVLIEHFNGKFPLW------LAPDQVRILPISDDQL 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +I LS V +D +G + A P +I+G VS + ++ R Sbjct: 552 GYAHRIKNELSD--FRVSIEDRAWTLGRKIRAAQEERVPYMIIIGDDEVSTETISVRDRK 609 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 ++D+ L ++ + N R Sbjct: 610 EREKQDVDLSTFHSHLKSEYENKR 633 >gi|297562530|ref|YP_003681504.1| prolyl-tRNA synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846978|gb|ADH68998.1| prolyl-tRNA synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 582 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 130/438 (29%), Positives = 191/438 (43%), Gaps = 48/438 (10%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G + + + G+Y+WLPLG+ L+NV I+REE Sbjct: 4 RMSTLFLRTLREDPADAEVPSHKLLVRGGFVRRAAPGVYTWLPLGKIVLENVARIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + +GR++ YG + RL DR + GPTHEE+ T + + Sbjct: 64 DAIGAQEVLLPALLPREYYEATGRWEEYGDTLFRLKDRKGADYLLGPTHEELFTLLVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ KFRDE RPR GV+R REF MKD+YSFD+ EG + SY +Y Sbjct: 124 YSSYKDFPVTLYQIQEKFRDEARPRAGVLRGREFHMKDSYSFDIDDEGLRASYADHRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +R+F RLGL+ + + A SG +GG S EF+ +A TGE F D+ E Sbjct: 184 IRVFDRLGLEYVIVSATSGAMGGSASEEFLAVAPTGE-DTFVRSTESDYAANVEAVAVPA 242 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 +L A + + L D L G +S + Sbjct: 243 PEALPVEGLPEAAVHHTPDTATIQTLVDFLNGAG--------------LGRDFSEADTLK 288 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 V + + GA + D + A + ++ D Sbjct: 289 ---------NVLVKTRAPGAKEWELLAVGLPGDREVDFKRLEAALEPAEVALLEEADFAA 339 Query: 362 RDACEKIY---ARLSKVGCDVFWDDM-----------GEQIGSQFAVADLLGFPLQVIVG 407 K Y L D E A ++G ++ G Sbjct: 340 NPFLVKGYIGPRALLDNKVRYLVDPRVVTGTSWVTGADE------ADHHVVG----LVAG 389 Query: 408 SKFVSDSKVEIKHRLTGI 425 FV D +++ G Sbjct: 390 RDFVPDGTIDVAEVRDGD 407 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 71/183 (38%), Positives = 96/183 (52%), Gaps = 6/183 (3%) Query: 258 ATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T DV + D P+ + RGIE+GHIF G KY+ G DGK + MG Sbjct: 396 GTIDVAEVRDGDPSPDGRGTLYTARGIEIGHIFQLGRKYTDAFQVDALGPDGKPRRITMG 455 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R VAAV+E SHD KG++WP VAP + + + +I L Sbjct: 456 SYGIGVSRAVAAVVEQSHDDKGVVWPREVAPADVH--VVGTGKGEQIEEALRIARELEAR 513 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G V DD G G +F A+LLG P VIVG + + D VE++ R TG RE+++L E+ Sbjct: 514 GLRVLVDDRKGVSPGVKFTDAELLGVPTGVIVG-RGLKDGLVELRDRATGDREEVALAEI 572 Query: 435 INY 437 ++ Sbjct: 573 VDR 575 >gi|88809590|ref|ZP_01125097.1| threonyl-tRNA synthetase [Synechococcus sp. WH 7805] gi|88786340|gb|EAR17500.1| threonyl-tRNA synthetase [Synechococcus sp. WH 7805] Length = 611 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 68/431 (15%), Positives = 137/431 (31%), Gaps = 36/431 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD L L + + + G+ W P G + + R+ G + Sbjct: 203 EEALRRDHRRIGKDLDLFS-IEDEAGAGLVFWHPRGARMRLLIEDFWRQAHFEGGYELLY 261 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + LW SG D Y + M +++ P + + S ++SYR LP Sbjct: 262 TPHVADISLWKTSGHLDFYAESMFGPMQVDEREYQLKPMNCPFHVLTYASKLRSYRELPI 321 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + ++ +R E G+MR R F DA+ F L + S K+ RI Sbjct: 322 RWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDE-ILKILDLTERILSTFD 380 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + + P D + I Sbjct: 381 FNTYEINLSTRPEKS-----------------IGDDAVWDLATKGLIEALERKGWAYKID 423 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 E A Y D+ K+ D++ + S ++ F ++ L A + Sbjct: 424 EGGGAFYGPKIDL---KIEDAIGRMWQCSTIQLD----FNLPERFKLDYIAA--DGSKQR 474 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + + R + E+ + E++ Sbjct: 475 PIMIHRAIFGSLERFFGIMTENYAGDYPFWLAPEQVRLLPVT-------DEVQPYAERLL 527 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +L++VG D G+++G + + P+ ++G+K + V ++ R G + Sbjct: 528 DQLTQVGVRATIDRSGDRLGKLIRTGEQMKIPVLAVIGAKEAEQNAVSLRSRRDGDLGVV 587 Query: 430 SLEEVINYASH 440 ++ +++ + Sbjct: 588 TMADLLRAVQN 598 >gi|258593203|emb|CBE69542.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) [NC10 bacterium 'Dutch sediment'] Length = 572 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 108/262 (41%), Positives = 160/262 (61%), Gaps = 1/262 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++ +P L+E P +AE SHKLM+R G++ Q + GIY LPLGQ+ +D ++AIIREE Sbjct: 1 MRWTRSLIPTLKEEPAEAEAISHKLMVRAGLVRQLAAGIYITLPLGQRVMDKISAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR E+++P L A+LW ++GR+ + G+EM RL DR + M G THEEV+ + Sbjct: 61 MNRIDGQEITMPVLHPAELWQQTGRWATIGEEMFRLYDRGKRQMCLGMTHEEVVAWLAAR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR+LP T+YQIQ K RDE RP+ GV+R+REF+MKD+YS D G + SY + Sbjct: 121 EIRSYRDLPQTWYQIQTKLRDEARPKSGVLRTREFVMKDSYSLDRDDAGLEKSYELHKEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSENTDF 239 Y RIF R GL + ++ G +GG ++HEF+ ++ GE ++ C + I + Sbjct: 181 YCRIFTRCGLSFHAVESDPGMMGGAVAHEFMAPSEAGEDEIALCDRCGYSANIELAVSRP 240 Query: 240 DDIISLNSIVEQWTAPYAATSD 261 + +E+ P A T + Sbjct: 241 RSPVFTTWDLEEIATPGAGTIE 262 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 109/196 (55%), Gaps = 4/196 (2%) Query: 254 APYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 +D+H D P E R IE+G+IF GTKYS+PM A + G+++ Sbjct: 368 HFQPRWADIHQVSNGDRCPHCEGSLRIERVIEIGNIFRLGTKYSIPMKAVYLSEAGEEYP 427 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + MGSYGIG R+ AA +E HD GIIWP ++APF++ L+ + DQ + E +Y++ Sbjct: 428 IVMGSYGIGLARIAAAAVEQHHDDLGIIWPSAIAPFQLHLLPVNMRDQKMAELAEALYSQ 487 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L + G + +DD E+ G +F ADLLG P+++ +G++ + + V++K R T + L Sbjct: 488 LQQAGIETLYDDRDERAGVKFKDADLLGLPMRMTIGTRTLKEGMVDLKIRKTAKEVQIPL 547 Query: 432 EEVINYASHRFSNNRP 447 E ++ S RP Sbjct: 548 SEAVSTVHSLLS--RP 561 >gi|84998192|ref|XP_953817.1| threonyl-tRNA synthetase [Theileria annulata] gi|65304814|emb|CAI73139.1| threonyl-tRNA synthetase, putative [Theileria annulata] Length = 743 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 85/457 (18%), Positives = 154/457 (33%), Gaps = 51/457 (11%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQH-SKGIYSWLPLGQKALDNVNAIIREEQN 62 K + ++E RD L L S G WLP G K + + +R+ Sbjct: 313 KMYKNRIEEAKQRDHRTIGTDLKLF--YFDTVHSPGSCFWLPNGAKIYNRLVEFMRDNYR 370 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P + S DLW +SG YD+Y + M L + D P + +F+ Sbjct: 371 VRGYQEVITPNIFSCDLWKQSGHYDNYKENM-YLFNLEDTEWGMKPMNCPGHCLMFKHLF 429 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY+ LP + R+EL G+ R R F DA+ F + Sbjct: 430 LSYKQLPLRLADFGVLHRNELTGSLSGLTRVRRFQQDDAHIFCTREQIMDE--------V 481 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L I +G D +EF T + + + S + Sbjct: 482 LNILTFIGKVYSLF---------DFRYEF--KLSTKPAKALGEDELWEIAEKSLEEALNK 530 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + ++ A Y DV LFD L + ++ F +Y ++ Sbjct: 531 TGTKWTMNPGDGAFYGPKIDV---VLFDCLDREHQCGTIQLDFNLPIRFNLEYRDKSESS 587 Query: 302 FKG-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G + V + G++ A++ + P ++P ++ I I + Sbjct: 588 AENVRCGFNRPVIIHRAIFGSIERFVAIVL---EQTKGKLPFWLSPNQLLFIPITDNH-- 642 Query: 361 CRDACEKIYARLSK----------------VGCDVFWDDMGEQIGSQFAVADLLGFPLQV 404 D ++Y + + +G +V D I + + Sbjct: 643 -LDYALELYEKFNALGSNTNYIILIMIINGLGYNVDVDKSNNTINKKIKFGQQQRWNYMG 701 Query: 405 IVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 IVG + V V ++ R + + +SL++++ + Sbjct: 702 IVGDREVETRTVSLRPRDSDEQNVISLDDLVKLFESQ 738 >gi|254796675|ref|YP_003081511.1| threonyl-tRNA synthetase [Neorickettsia risticii str. Illinois] gi|254589907|gb|ACT69269.1| threonyl-tRNA synthetase [Neorickettsia risticii str. Illinois] Length = 647 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 153/445 (34%), Gaps = 41/445 (9%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L L E R D + L + + ++G W G + IR + Sbjct: 232 ESYLSFLHEAKRRDHRAIGKTMELF--HLQEEAQGQVFWHENGFLLYRVLENYIRSKLKA 289 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P + S LW SG + + + M + +D P + ++F+ +K Sbjct: 290 HDYREVKTPVVYSKCLWERSGHWSKFKENMF-VIRSDDGEFSLKPMNCPAHIEVFKQSLK 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + + R+E G+MR R F+ DA+ F + + Sbjct: 349 SYRDLPLRLAEFGMCHRNEASGALHGLMRVRGFVQDDAHIFCTPEQICDETVAF-CELLK 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ LG + +R P + E D + + D Sbjct: 408 EVYRDLGFTEVEVRFSDRPEVRLGNDE-----------------TWDKAEIALKSAMDKA 450 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + ++ A Y + L D+L + ++ F + + AT+ Sbjct: 451 GLVYTLNPGEGAFYGPKIEF---VLVDALKRKWQCGTLQVD----FVLPER----LDATY 499 Query: 303 KGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 +G K H V + +G ++ +DGK +W +++ + Sbjct: 500 IDHEGKKQHPVMLHRAILGTFERFLGILIEHYDGKFPLWLAPTQVAVLTIT------EKV 553 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + + LSK G D ++I + P+ I+G ++ V ++ Sbjct: 554 EEYAKSLLNHLSKTGIRAVSDFSNQRIDYKIRYHTTRRVPILWIIGRIEEKNNSVTVRRM 613 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + E +++ ++ F+ + Sbjct: 614 GSSESEVKTVDTALDDILGEFNVRQ 638 >gi|86608959|ref|YP_477721.1| threonyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557501|gb|ABD02458.1| threonyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 603 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 68/444 (15%), Positives = 142/444 (31%), Gaps = 42/444 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + L+E R D +L L + G+ W P G + +++EQ + G Sbjct: 192 YKRRLEEAKRRDHRKLGKELGLFL-FSDEVGPGLPLWTPKGTTLRWVLEDFLKQEQLKRG 250 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA------MIYGPTHEEVMTDIFR 119 + + P + DL+ SG + Y ++M + N++A + P + I++ Sbjct: 251 YLPVVTPHIARVDLFKISGHWQKYREDMFPMMAENEQARAAEQGFVMKPMNCPFHIQIYK 310 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 S ++SYR+LP + + +R E G + D + P+ + + K+ Sbjct: 311 SELRSYRDLPLRYAEFGTVYRYEQSGELGGLTRVRGFTVDDAHLFVRPDQLEEEFLKVVD 370 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L +F +L LK R D + S + D + Sbjct: 371 LILVVFDKLKLKDFRARLS--------------FRDPKSDKYLGSPEDWDRAENAIRRAV 416 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + + A Y D D+L ++ ++ + F Sbjct: 417 EKLSMPHFEGIGEAAFYGPKLDFI---FRDALDREWQLGTVQVDYQNPQRFD-------- 465 Query: 300 ATFKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + DG M R++ +IE Sbjct: 466 LQYVAEDGSRQRPVMIHRAPFGSLERLIGILIEEYAGDFPFWLAPEQVRILPV------- 518 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 ++ +L + G V D +++ + A+ P +IVG + + V Sbjct: 519 SDQYLGYATQVRDQLREQGIRVHIDADSDRLPKKIRNAEKARIPFMLIVGEQEQAAGTVS 578 Query: 418 IKHRLTGIREDMSLEEVINYASHR 441 ++ R +++ + ++ Sbjct: 579 VRQRHGQELGSLTVADFLDQVQAL 602 >gi|313813363|gb|EFS51077.1| prolyl-tRNA synthetase [Propionibacterium acnes HL025PA1] Length = 581 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 106/271 (39%), Positives = 155/271 (57%), Gaps = 6/271 (2%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 1 MSQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEMA 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 61 SIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDLY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y+ Sbjct: 121 SSYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYI 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RIF+RLG ++A SGP+GG S EF+ +A GE S + + D Sbjct: 181 RIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGEDTFVRSSGGYAANVEAVRMAVPDP 240 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + ++ P A D + + +SL Sbjct: 241 LPID------GLPEAEVVDTPDARTIESLVR 265 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 4/188 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 DV + D P+ + ARGIE+GHIF G KY+ + +GK V MG Sbjct: 395 GVIDVAEIREGDPAPDGSGELHLARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R VAA+ E + D KG+ WP VAP+ + ++ ++ + +I + L++ Sbjct: 455 SYGLGVSRAVAAIAEGTCDEKGLCWPREVAPYDVQVLATGKGTEILDE-ATRIASELAEA 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD G +FA +++LG P V+VG + + D VE++ R TG +S+ E + Sbjct: 514 GLEVLLDDRKASPGVKFADSEILGMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAV 572 Query: 436 NYASHRFS 443 Sbjct: 573 CAVLKEVR 580 >gi|313811577|gb|EFS49291.1| prolyl-tRNA synthetase [Propionibacterium acnes HL083PA1] Length = 581 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 106/271 (39%), Positives = 155/271 (57%), Gaps = 6/271 (2%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 1 MSQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEMA 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 61 SIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDLY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y+ Sbjct: 121 SSYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYI 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RIF+RLG ++A SGP+GG S EF+ +A GE S + + D Sbjct: 181 RIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGEDTFVRSSGGYAANVEAVRMAVPDP 240 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + ++ P A D + + +SL Sbjct: 241 LPID------GLPEAEVVDTPDARTIESLVR 265 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 4/188 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 DV + D P+ + ARGIE+GHIF G KY+ + +GK V MG Sbjct: 395 GVIDVAEIREGDPAPDGSGELHLARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R VAA+ E + D KG+ WP VAP+ + ++ ++ + +I + L++ Sbjct: 455 SYGLGVSRAVAAIAEGTCDEKGLCWPREVAPYDVQVLATGKGTEILDE-ATRIASELAEA 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD G +FA +++LG P V+VG + + D VE++ R TG +S+ E + Sbjct: 514 GLEVLLDDRKASPGVKFADSEILGMPTSVVVGRR-LKDGLVEVRDRSTGENRQVSVAEAV 572 Query: 436 NYASHRFS 443 Sbjct: 573 CAVLKEVR 580 >gi|313773524|gb|EFS39490.1| prolyl-tRNA synthetase [Propionibacterium acnes HL074PA1] gi|313831317|gb|EFS69031.1| prolyl-tRNA synthetase [Propionibacterium acnes HL007PA1] gi|313834927|gb|EFS72641.1| prolyl-tRNA synthetase [Propionibacterium acnes HL056PA1] gi|314974192|gb|EFT18288.1| prolyl-tRNA synthetase [Propionibacterium acnes HL053PA1] gi|314976699|gb|EFT20794.1| prolyl-tRNA synthetase [Propionibacterium acnes HL045PA1] gi|314984337|gb|EFT28429.1| prolyl-tRNA synthetase [Propionibacterium acnes HL005PA1] gi|315095331|gb|EFT67307.1| prolyl-tRNA synthetase [Propionibacterium acnes HL038PA1] gi|327328406|gb|EGE70168.1| proline--tRNA ligase [Propionibacterium acnes HL096PA2] gi|327444193|gb|EGE90847.1| prolyl-tRNA synthetase [Propionibacterium acnes HL043PA2] gi|327444928|gb|EGE91582.1| prolyl-tRNA synthetase [Propionibacterium acnes HL043PA1] gi|328760064|gb|EGF73644.1| proline--tRNA ligase [Propionibacterium acnes HL099PA1] Length = 581 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 106/271 (39%), Positives = 155/271 (57%), Gaps = 6/271 (2%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 1 MSQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEMA 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 61 SIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDLY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y+ Sbjct: 121 SSYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYI 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RIF+RLG ++A SGP+GG S EF+ +A GE S + + D Sbjct: 181 RIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGEDTFVRSSGGYAANVEAVRMAVPDP 240 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + ++ P A D + + +SL Sbjct: 241 LPID------GLPEAEVVDTPDARTIESLVR 265 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 4/188 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 DV + D P+ + ARGIE+GHIF G KY+ + +GK V MG Sbjct: 395 GVIDVAEIREGDPAPDGSGELHLARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R VAA+ E + D KG+ WP VAP+ + ++ ++ + +I + L++ Sbjct: 455 SYGLGVSRAVAAIAEGTCDEKGLCWPREVAPYDVQVLATGKGTEILDE-ATRIASELAEA 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD G +FA +++LG P V+VG + + D VE++ R TG +S+ E + Sbjct: 514 GLEVLLDDRKASPGVKFADSEILGMPTSVVVGRR-LKDGLVEVRDRSTGENRQVSVAEAV 572 Query: 436 NYASHRFS 443 Sbjct: 573 CAVLKEVR 580 >gi|313763586|gb|EFS34950.1| prolyl-tRNA synthetase [Propionibacterium acnes HL013PA1] gi|313807954|gb|EFS46435.1| prolyl-tRNA synthetase [Propionibacterium acnes HL087PA2] gi|313822153|gb|EFS59867.1| prolyl-tRNA synthetase [Propionibacterium acnes HL036PA1] gi|313823613|gb|EFS61327.1| prolyl-tRNA synthetase [Propionibacterium acnes HL036PA2] gi|313825936|gb|EFS63650.1| prolyl-tRNA synthetase [Propionibacterium acnes HL063PA1] gi|314914740|gb|EFS78571.1| prolyl-tRNA synthetase [Propionibacterium acnes HL005PA4] gi|314919298|gb|EFS83129.1| prolyl-tRNA synthetase [Propionibacterium acnes HL050PA1] gi|314920792|gb|EFS84623.1| prolyl-tRNA synthetase [Propionibacterium acnes HL050PA3] gi|314924644|gb|EFS88475.1| prolyl-tRNA synthetase [Propionibacterium acnes HL036PA3] gi|314930471|gb|EFS94302.1| prolyl-tRNA synthetase [Propionibacterium acnes HL067PA1] gi|314954371|gb|EFS98777.1| prolyl-tRNA synthetase [Propionibacterium acnes HL027PA1] gi|314957443|gb|EFT01546.1| prolyl-tRNA synthetase [Propionibacterium acnes HL002PA1] gi|314962089|gb|EFT06190.1| prolyl-tRNA synthetase [Propionibacterium acnes HL002PA2] gi|314968504|gb|EFT12602.1| prolyl-tRNA synthetase [Propionibacterium acnes HL037PA1] gi|314978817|gb|EFT22911.1| prolyl-tRNA synthetase [Propionibacterium acnes HL072PA2] gi|314986526|gb|EFT30618.1| prolyl-tRNA synthetase [Propionibacterium acnes HL005PA2] gi|314990885|gb|EFT34976.1| prolyl-tRNA synthetase [Propionibacterium acnes HL005PA3] gi|315081252|gb|EFT53228.1| prolyl-tRNA synthetase [Propionibacterium acnes HL078PA1] gi|315083450|gb|EFT55426.1| prolyl-tRNA synthetase [Propionibacterium acnes HL027PA2] gi|315087136|gb|EFT59112.1| prolyl-tRNA synthetase [Propionibacterium acnes HL002PA3] gi|315089308|gb|EFT61284.1| prolyl-tRNA synthetase [Propionibacterium acnes HL072PA1] gi|315099214|gb|EFT71190.1| prolyl-tRNA synthetase [Propionibacterium acnes HL059PA2] gi|315100435|gb|EFT72411.1| prolyl-tRNA synthetase [Propionibacterium acnes HL046PA1] gi|315106771|gb|EFT78747.1| prolyl-tRNA synthetase [Propionibacterium acnes HL030PA1] gi|315109012|gb|EFT80988.1| prolyl-tRNA synthetase [Propionibacterium acnes HL030PA2] gi|327329728|gb|EGE71484.1| proline--tRNA ligase [Propionibacterium acnes HL096PA3] gi|327454965|gb|EGF01620.1| prolyl-tRNA synthetase [Propionibacterium acnes HL087PA3] gi|327457749|gb|EGF04404.1| prolyl-tRNA synthetase [Propionibacterium acnes HL083PA2] gi|328752168|gb|EGF65784.1| prolyl-tRNA synthetase [Propionibacterium acnes HL020PA1] gi|328755200|gb|EGF68816.1| prolyl-tRNA synthetase [Propionibacterium acnes HL087PA1] gi|328758320|gb|EGF71936.1| prolyl-tRNA synthetase [Propionibacterium acnes HL025PA2] Length = 581 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 106/271 (39%), Positives = 155/271 (57%), Gaps = 6/271 (2%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 1 MSQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEMA 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 61 SIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDLY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y+ Sbjct: 121 SSYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYI 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RIF+RLG ++A SGP+GG S EF+ +A GE S + + D Sbjct: 181 RIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGEDTFVRSSGGYAANVEAVRMAVPDP 240 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + ++ P A D + + +SL Sbjct: 241 LPID------GLPEAEVVDTPDARTIESLVR 265 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 4/188 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 DV + D P+ + ARGIE+GHIF G KY+ + +GK V MG Sbjct: 395 GVIDVAEIREGDPAPDGSGELHLARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R VAA+ E + D KG+ WP VAP+ + ++ ++ + +I + L++ Sbjct: 455 SYGLGVSRAVAAIAEGTCDEKGLCWPREVAPYDVQVLATGKGTEILDE-ATRIASELAEA 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD G +FA +++LG P V+VG + + D VE++ R TG +S+ E + Sbjct: 514 GLEVLLDDRKASPGVKFADSEILGMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAV 572 Query: 436 NYASHRFS 443 Sbjct: 573 CAVLKEVR 580 >gi|304319895|ref|YP_003853538.1| Threonyl-tRNA synthetase [Parvularcula bermudensis HTCC2503] gi|303298798|gb|ADM08397.1| Threonyl-tRNA synthetase [Parvularcula bermudensis HTCC2503] Length = 657 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 80/448 (17%), Positives = 149/448 (33%), Gaps = 55/448 (12%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K +L L+E RD ++ L + + + G W P G + A IR Sbjct: 227 KALKAYLTRLEEAEKRDHRRLGKQMDLF--HLQEEAHGSVFWHPKGYTMWLALEAYIRRR 284 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML-------------RLADRNDKAMIYG 107 + G E+ P L A LW SG + Y + M + D K M Sbjct: 285 LDAAGYKEVKTPQLIDAKLWQSSGHWGKYSQNMFVVPDEVPDVEGEGPVIDPEAKLMAVK 344 Query: 108 PTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLT 166 P + IFR I SYR+LP + R+E G+MR R+F DA+ F Sbjct: 345 PMNCPAHVQIFRQGITSYRDLPIRMAEFGCCHRNEPHGALHGIMRVRQFTQDDAHIFCTE 404 Query: 167 PEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 + + + + ++ LG + + + + P + EF ++ + + Sbjct: 405 EQIVEETI-RFCELASSVYRDLGFEDVRVAMATRPEQRIGTDEFWDKMESALEEALIAAG 463 Query: 227 FMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGH 286 +P E A YA + H L D++ + + ++ Sbjct: 464 LEFEVLPGE-----------------GAFYAPKLEYH---LRDAIGRSWQCGTLQLDALL 503 Query: 287 IFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSV 344 + A + DG M I R + +IE+ + + Sbjct: 504 P--------ERLDAVYIDEDGAKKRPIMLHRAILGSMERFLGILIENHAGRMPLWLAPTQ 555 Query: 345 APFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQV 404 ++ A + DA V D E+I + P+ Sbjct: 556 IVVATITTDVNAFAEEAADAF-------RAANLRVETDLRNEKINYKVREHSDGKVPIIA 608 Query: 405 IVGSKFVSDSKVEIKHRLTGIREDMSLE 432 ++G++ + + ++ + + +SL+ Sbjct: 609 VIGAREAEERTLSVRRLGSKQSQTLSLD 636 >gi|313836817|gb|EFS74531.1| prolyl-tRNA synthetase [Propionibacterium acnes HL037PA2] gi|314929774|gb|EFS93605.1| prolyl-tRNA synthetase [Propionibacterium acnes HL044PA1] gi|314972203|gb|EFT16300.1| prolyl-tRNA synthetase [Propionibacterium acnes HL037PA3] Length = 581 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 104/252 (41%), Positives = 150/252 (59%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + L + AI REE Sbjct: 1 MSQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVLRRIEAICREEMA 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 61 GIGAQEVSFPALLASDPYKETGRWAEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDLY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y+ Sbjct: 121 SSYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDDAYQAQRDAYI 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RIF+RLG ++A SGP+GG S EF+ +A GE S D + + D Sbjct: 181 RIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGEDTFVHSADGYAANVEAVRIAAPDP 240 Query: 243 ISLNSIVEQWTA 254 + ++ + E Sbjct: 241 LPIDGLPEAEVV 252 Score = 129 bits (325), Expect = 7e-28, Method: Composition-based stats. Identities = 60/170 (35%), Positives = 92/170 (54%), Gaps = 4/170 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 DV + D P+ + +RGIE+GHIF G KY+ + +GK V MG Sbjct: 395 GVIDVAEIREGDPAPDGSGELHLSRGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R VAA+ E + D KG++WP VAPF + ++ + + +I + L++V Sbjct: 455 SYGLGVSRAVAAIAEGTCDEKGLVWPREVAPFDVQVLATGKGTDILDE-ATRIASELAEV 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 G +V DD G +FA +++LG P V+VG + + D VE++ R TG Sbjct: 514 GLEVLLDDRKASPGVKFADSEILGVPTSVVVG-RGLKDGLVEVRDRATGE 562 >gi|284992392|ref|YP_003410946.1| prolyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160] gi|284065637|gb|ADB76575.1| prolyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160] Length = 582 Score = 220 bits (560), Expect = 5e-55, Method: Composition-based stats. Identities = 97/245 (39%), Positives = 139/245 (56%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+++P DAE+ SH+L++R G I + + G ++WLPLG + NV ++REE Sbjct: 4 RMSTLFLRTLRDDPADAEVPSHRLLVRAGYIRRAAPGGFTWLPLGYRVFRNVERVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 +R GA E+ P L + + + R+ YG + RL DR + GPTHEE+ T + + Sbjct: 64 DRMGAQEVHFPALLPREPYEATNRWTEYGPNLFRLQDRRGADFLLGPTHEEMFTLLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP + YQIQ K+RDE RPR G+ R REF MKD+YSFD+ G SY +Y Sbjct: 124 YSSYKDLPLSLYQIQTKYRDEARPRAGLFRGREFTMKDSYSFDVDDAGLDKSYAAHRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +R+F RLGL + + A SG +GG S EF+ GE S + + T D Sbjct: 184 IRVFDRLGLDYVIVSAMSGAMGGSRSEEFLHPTPIGEDTFVRSSGGYAANVEAVTTVVPD 243 Query: 242 IISLN 246 + L Sbjct: 244 EVPLE 248 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 91/189 (48%), Gaps = 5/189 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 + D P+ ARG+E+GHIF G KY+ + +GK V MG Sbjct: 395 GVVEAAEVLAGDPAPDGSGPLELARGVEMGHIFQLGRKYAEALDLKVLDENGKLVTVTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R VAA+ ES+HD G++WP VAP + ++ D + E + L Sbjct: 455 SYGIGVSRAVAAIAESTHDELGLVWPREVAPADVHVVATG-KDAAVFETAEALAQELLAA 513 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G V +DD G +F A+LLG P V VG + +++ +E++ R TG RE++ + EV Sbjct: 514 GLTVLYDDRPKVSPGVKFKDAELLGMPTIVTVG-RGLAEGVLELRDRATGEREEVPVGEV 572 Query: 435 INYASHRFS 443 Sbjct: 573 AARVLAAVR 581 >gi|256832247|ref|YP_003160974.1| prolyl-tRNA synthetase [Jonesia denitrificans DSM 20603] gi|256685778|gb|ACV08671.1| prolyl-tRNA synthetase [Jonesia denitrificans DSM 20603] Length = 594 Score = 219 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 116/279 (41%), Positives = 155/279 (55%), Gaps = 2/279 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S F+ L+E+P DAE+ASH+L++R G I + + GIYSWLPLG + LD V+A++REE Sbjct: 4 RLSTLFVRTLREDPVDAEVASHRLLVRAGYIRRAAPGIYSWLPLGLRVLDKVDAVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 R GA + P L + + +GR+ YG + RL DR D + PTHEE+ T + + Sbjct: 64 ERAGAQRVHFPALLPREPYEATGRWTEYGPNLFRLQDRKDGDYLLAPTHEEMFTLLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSFDLT EG SY +Y Sbjct: 124 YSSYKDLPVTLYQIQTKYRDEARPRAGLIRGREFIMKDAYSFDLTEEGLAESYRAQRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF RLGL + + A SG +GG S EF+ D GE S + + T Sbjct: 184 ERIFRRLGLDYVIVAATSGAMGGSRSEEFLTPTDIGEDTFVRSPGGYAANVEAVTTIAPP 243 Query: 242 I--ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS 278 + + P A+T D L D P R Sbjct: 244 AQDATNVPAAQTVNTPGASTIDALVTWLNDHEPREDRAW 282 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 6/189 (3%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ ARGIE+GHIF G KY+ + +GK V MG Sbjct: 402 GTIEAAQVRAGDPAPDGSGPLDLARGIEIGHIFQLGRKYAEALGLKVLDVNGKHTTVTMG 461 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG RV+AA+ ++ HD +G+ WP VAP + L+ D +A E + RLS Sbjct: 462 SYGIGVTRVMAALAQAHHDSQGLAWPIQVAPAHVHLVATG-KDARIFEAAESLAQRLSDR 520 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD G +F A+L G P V+VG + + + +E + R+ G + + + + Sbjct: 521 GVEVIYDDRVKVSPGVKFKDAELFGVPFIVVVG-RGLDEGTIEFRTRV-GEPQQVHINDA 578 Query: 435 INYASHRFS 443 ++ + + Sbjct: 579 VDVVTDAVA 587 >gi|302561695|ref|ZP_07314037.1| threonyl-tRNA synthetase [Streptomyces griseoflavus Tu4000] gi|302479313|gb|EFL42406.1| threonyl-tRNA synthetase [Streptomyces griseoflavus Tu4000] Length = 658 Score = 219 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 69/439 (15%), Positives = 132/439 (30%), Gaps = 36/439 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + Q G+ + P G + R G + Sbjct: 254 EAEKRDHRKLGSELDLFS-IPEQIGSGLAVFHPKGGIIRRVMEDYSRRRHEEEGYEFVYT 312 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P L+ SG D Y M P + + IF + +SYR LP Sbjct: 313 PHATKGKLFETSGHLDWYADGMYPPMQLDEGVDYYLKPMNCPMHNLIFDARGRSYRELPL 372 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 ++ +R E G+ R+R F DA+ + + S+ +K L + G Sbjct: 373 RLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQMSEEL-DKTLTFVLNLLRDYG 431 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 L + + + S + + + + Sbjct: 432 LTDFYLELST----------------KDPEKFVGSDEAWEEATQTLREVAEKQGLELVAD 475 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y + + D++ ++S ++ F ++ L +A K Sbjct: 476 PGGAAFYGPKI---SVQTKDAIGRTWQMSTIQLD----FNLPERFDLEYTAA---DGSKT 525 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + G++ AV+ + G W V I + + EK Sbjct: 526 RPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQAVGIPVG------DAHVEYLEKFA 579 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 + G V D +++ + L P +IVG + ++ V ++R + Sbjct: 580 TEARQKGLRVEVDSSSDRMQKKIRTQQKLKVPFMIIVGDEDMNAGTVSFRYRDGSQENGI 639 Query: 430 SLEEVINYASHRFSNNRPV 448 E+ + V Sbjct: 640 PREQALAKLLDVVERRVQV 658 >gi|157692336|ref|YP_001486798.1| prolyl-tRNA synthetase [Bacillus pumilus SAFR-032] gi|166980100|sp|A8FDC1|SYP_BACP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157681094|gb|ABV62238.1| proline--tRNA ligase [Bacillus pumilus SAFR-032] Length = 565 Score = 219 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 111/231 (48%), Positives = 159/231 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DAE SH+L++R G I Q++ GIY +LPL K + ++ +I+R+E Sbjct: 1 MRQSLTFIPTLREVPADAEAKSHQLLVRAGFIRQNTSGIYHYLPLAHKVIQHIQSIVRKE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P LQ A++W ESGR+ +YG E++R+ DR+ + GPTHEEV+T + RS Sbjct: 61 MEKAGAAELLMPVLQQAEMWQESGRWYTYGPELMRMKDRHGREFALGPTHEEVITSLVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF +PE +YNKMF + Sbjct: 121 EVKSYKKLPLTLYQIQSKFRDEQRPRFGLLRGREFIMKDAYSFHSSPESLDDTYNKMFTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 Y +F ++GL P+ A+SG +GG +HEF+ L++ GE + S Sbjct: 181 YSNVFSKVGLNFRPVIADSGAMGGKDTHEFMALSEVGEDTIAYSDTSSYAA 231 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 64/182 (35%), Positives = 108/182 (59%), Gaps = 3/182 (1%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ + D P+ + +GIEVG +F GT+YS M AT+ +G+ + MG YG Sbjct: 384 DLRFIQEGDVSPDGEGTIQFAKGIEVGQVFKLGTRYSESMDATYLDENGRAQPMIMGCYG 443 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R ++A++E HD KGIIWP++VAP+ + L+ + + ++ E +Y RL G D Sbjct: 444 IGISRTLSAIVEQHHDEKGIIWPEAVAPYDLHLLALNMKNDAQKELAETLYERLENEGFD 503 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V +DD E+ G +FA +DL+G P+++ G + + VE+K R +G ++S++E+I++ Sbjct: 504 VLFDDRQERAGVKFADSDLIGLPIRISCGKRS-EEGIVEVKFRKSGESHEVSVDELISFI 562 Query: 439 SH 440 Sbjct: 563 RQ 564 >gi|284991611|ref|YP_003410165.1| threonyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160] gi|284064856|gb|ADB75794.1| threonyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160] Length = 690 Score = 219 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 66/448 (14%), Positives = 132/448 (29%), Gaps = 49/448 (10%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + G+ + P G + R G ++ Sbjct: 260 EAERRDHRRLGAELDLFS-FPDEIGSGLAVFHPKGGVVRREMEDYSRRRHEEAGYSFVNT 318 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDIFR 119 P + L+ SG + Y + M R + P + V +FR Sbjct: 319 PHITKGQLFQTSGHLEWYAEGMYPAMHLDEERDAEGKVRRQGQDYYLKPMNCPVHNLVFR 378 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 S +SY+ LP ++ +R E G+ R+R F DA+ + + + Sbjct: 379 SRGRSYKELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTPEQMQGE-IRSLL 437 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L + GL+ + + S + + + Sbjct: 438 QFVLDLLADYGLEDFYLELSTRNPEKS----------------IGSDEDWERATDALREA 481 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + + A YA + + D++ ++S +++ FG Sbjct: 482 AEASGLDLVLDPGGAAFYAPKI---SVQARDAIGRTWQMSTIQVDLMLPERFG------- 531 Query: 299 SATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + ADG + G+M V+ + G W V I + Sbjct: 532 -LEYTAADGTRQRPVMIHRALFGSMERFFGVLTEHYAGAFPAWLAPVQVVGIPVT----- 585 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + +L G V DD +++ + A P +I G+ V Sbjct: 586 -DEQVGYLRDVALQLRARGIRVEVDDSDDRMQKKIRTASKQRIPFVLIAGATDAEAGAVS 644 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 + R + +E+ + + + Sbjct: 645 FRFRDGSQHNGVPVEKAVAAIAEWVAGR 672 >gi|313819523|gb|EFS57237.1| prolyl-tRNA synthetase [Propionibacterium acnes HL046PA2] Length = 581 Score = 219 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 106/271 (39%), Positives = 154/271 (56%), Gaps = 6/271 (2%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 1 MSQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEMA 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 61 SIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDLY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY+ LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y+ Sbjct: 121 SSYKALPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYI 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RIF+RLG ++A SGP+GG S EF+ +A GE S + + D Sbjct: 181 RIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGEDTFVRSSGGYAANVEAVRMAVPDP 240 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + ++ P A D + + +SL Sbjct: 241 LPID------GLPEAEVVDTPDARTIESLVR 265 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 4/188 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 DV + D P+ + ARGIE+GHIF G KY+ + +GK V MG Sbjct: 395 GVIDVAEIREGDPAPDGSGELHLARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R VAA+ E + D KG+ WP VAP+ + ++ ++ + +I + L++ Sbjct: 455 SYGLGVSRAVAAIAEGTCDEKGLCWPREVAPYDVQVLATGKGTEILDE-ATRIASELAEA 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD G +FA +++LG P V+VG + + D VE++ R TG +S+ E + Sbjct: 514 GLEVLLDDRKASPGVKFADSEILGMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAV 572 Query: 436 NYASHRFS 443 Sbjct: 573 CAVLKEVR 580 >gi|307200699|gb|EFN80796.1| Threonyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator] Length = 691 Score = 219 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 73/441 (16%), Positives = 149/441 (33%), Gaps = 44/441 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + IR E + G E+ Sbjct: 285 EEAAKRDHRKIGKEQELF--FFHELSPGSCFFQPRGAYIYNTLIDFIRSEYRKRGFQEVI 342 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + ++ LW SG + Y + M D + P + IF +S+R LP Sbjct: 343 SPNIYNSKLWQVSGHWQHYAENMFSF-DVEKETYALKPMNCPGHCMIFDVRSRSWRELPL 401 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+E+ G+ R R F DA+ F + +K ++ G Sbjct: 402 RLADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCSVDQINKE-ILSALDFLRHVYSVFG 460 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 F + T + + + + ++ Sbjct: 461 FT------------------FDLCLSTRPEKFLGDIAIWNQAEKALEDSLNTFDEPWTLN 502 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 Q A Y D+ + D+L + + ++ F ++ + ++ G+ Sbjct: 503 PQDGAFYGPKIDI---TIRDALKRAHQCATIQLD----FQLPIRF----NLSYVNESGEK 551 Query: 310 -HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 V + +G++ + A++ + WP ++P + ++ + + ++ Sbjct: 552 VRPVIIHRAILGSVERMIAILT---ESYAGKWPFWLSPRQAMVVPVA---SQLDEYAYQV 605 Query: 369 YARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +L G V D D + + A L F ++VG K + V I+ R + Sbjct: 606 KQKLWDAGIMVEIDVDPNDSFNKKIRNAQLAQFNFILVVGEKERNAGTVNIRTRDNVVHG 665 Query: 428 DMSLEEVINYAS--HRFSNNR 446 +M +E++I + R Sbjct: 666 EMGVEDLIEKLKILKETKDRR 686 >gi|325672628|ref|ZP_08152324.1| threonine--tRNA ligase [Rhodococcus equi ATCC 33707] gi|325556505|gb|EGD26171.1| threonine--tRNA ligase [Rhodococcus equi ATCC 33707] Length = 683 Score = 219 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 58/441 (13%), Positives = 123/441 (27%), Gaps = 49/441 (11%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + G+ + P G + R+ G + Sbjct: 257 EAERRDHRKLGAELDLFS-FPDELGSGLPVFHPKGGIIRQEMENYSRKRHVEEGYEFVYS 315 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDIFR 119 P + L+ SG D Y M + + P + + +F Sbjct: 316 PHITKGHLYEVSGHLDWYKDGMFPAMHIDEELNEDGTVRKPGQDYYLKPMNCPMHNLVFG 375 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 S +SYR LP ++ +R E G+ R R DA+ + + Sbjct: 376 SRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTKEQMRDEL-TTTL 434 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L + GL + + + + + Sbjct: 435 KFVLGLLKDYGLDDFYLELST----------------KNPDKFVGDDALWEEATETLREV 478 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + A Y + ++ D+L + ++S ++ F ++ Sbjct: 479 GEASGLNLVPDPGGAAFYGPKI---SVQVQDALGRSWQMSTIQLD----FNLPERFD--- 528 Query: 299 SATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + G+DG + G++ V+ + G W V I + Sbjct: 529 -LEYTGSDGTKQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPVA----- 582 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + D + +L G D +++ + P ++ G + V V Sbjct: 583 -EAFEDHLFDVVKQLKAAGVRADVDVSDDRMQKKIRNHTTQKVPFMLLAGERDVEAGAVS 641 Query: 418 IKHRLTGIREDMSLEEVINYA 438 + R + + + + Sbjct: 642 FRFRDGTQVNGVPVADAVETI 662 >gi|320096236|ref|ZP_08027820.1| proline--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338] gi|319976817|gb|EFW08576.1| proline--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338] Length = 594 Score = 219 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 101/238 (42%), Positives = 142/238 (59%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S FL L+E+P DAE+ SHKL++R G I + + GIY+WLPLG + L + I+REE + Sbjct: 5 YSTLFLRTLREDPADAEVNSHKLLVRAGYIRRAAPGIYTWLPLGLRTLRKIEGIVREEMD 64 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 R GA E+ P L A+ + + R++ YG + +LADR + PTHEE+ T + + Sbjct: 65 RMGAQEVHFPGLIPAEPYKATNRWEDYGPTLFKLADRKGGDYLLAPTHEEMFTLLVKDMY 124 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSFD+ G + SY +Y Sbjct: 125 SSYKDLPTTLYQIQTKYRDEARPRAGLIRGREFVMKDAYSFDIDEAGLEASYQAERDTYE 184 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 RIF RLGL+ + + A SG +GG S EF+ + GE S + + T Sbjct: 185 RIFTRLGLEYVIVSAMSGAMGGSRSEEFLHPSPIGEDTFVRSPGGYAANVEAVTTPAP 242 Score = 80.2 bits (196), Expect = 7e-13, Method: Composition-based stats. Identities = 54/200 (27%), Positives = 83/200 (41%), Gaps = 31/200 (15%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ RGIE+GHIF G+KY+ + + +GK V MG Sbjct: 402 GTIEAAGIREGDEAPDGSGPLHVERGIEIGHIFQLGSKYAEALGLSVLDENGKSRVVTMG 461 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG RV+AA+ E++ D KG+ WP +APF + ++ D +A + A L Sbjct: 462 SYGIGVTRVMAALAEANCDDKGLSWPAGIAPFDVHVLATG-KDNAVFEAAASLAAALDAA 520 Query: 376 GCDVFWDD-MGEQIGSQFAVADLLGFPLQVIVGSKF-------------VSDSKVEIKHR 421 G DV +DD G +FA + VE++ R Sbjct: 521 GLDVVFDDRRKVSAGVKFADF--------------ELVGVPLGVVVGRGLKTGNVEVRVR 566 Query: 422 LTGIREDMSLEEVINYASHR 441 TG ++ ++ Sbjct: 567 GTGESFEVPVDAAAARVVEL 586 >gi|15835484|ref|NP_297243.1| threonyl-tRNA synthetase [Chlamydia muridarum Nigg] gi|270285665|ref|ZP_06195059.1| threonyl-tRNA synthetase [Chlamydia muridarum Nigg] gi|270289673|ref|ZP_06195975.1| threonyl-tRNA synthetase [Chlamydia muridarum Weiss] gi|301337060|ref|ZP_07225262.1| threonyl-tRNA synthetase [Chlamydia muridarum MopnTet14] gi|13878797|sp|Q9PJF9|SYT_CHLMU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|7190897|gb|AAF39666.1| threonyl-tRNA synthetase [Chlamydia muridarum Nigg] Length = 635 Score = 219 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 71/442 (16%), Positives = 134/442 (30%), Gaps = 42/442 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++ + + RD + KL L + +S G+ + P G + + + Sbjct: 223 LKEHLHQLEEAKKRDHRVLGTKLDLFSQ--QSYSAGMPFFHPRGMVIWNALIDYWKRLHQ 280 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G ++ P L S +LW SG +++Y + M L +++ P + +++ + Sbjct: 281 LAGYQQIQTPQLMSRELWEISGHWENYKENMYTLT-VDEEDYAIKPMNCPGCMLYYKTQL 339 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR P +I R EL G+MR R F DA+ LTPE + + Sbjct: 340 HSYREFPLRIAEIGHVHRHELSGALSGLMRVRTFHQDDAH-VFLTPEQVEEETLNILNLV 398 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ GL + + P E S D + + Sbjct: 399 SELYGTFGLDY-HLELSTRP----------------EQGTIGSDDLWELATEALKNALVK 441 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I A Y D+H K R + G I Sbjct: 442 SQKPFIISPGEGAFYGPKIDIHV----------KDAINRTWQCGTI-QLDMFLPERFDLK 490 Query: 302 FKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G+ M + R + +IE + Sbjct: 491 YTNPQGEKSTPIMLHRALFGSIERFLGILIEHFKGRFPLWLSPEHVRIITVA-------D 543 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +++ ++ G D E + + A + + +G K + + ++ Sbjct: 544 RHEARAQELAKYFTQQGILATVDQASESVSKKIRNAQNMQVNYMITIGDKELETQLLAVR 603 Query: 420 HRLTGIREDMSLEEVINYASHR 441 R + D+S+E N Sbjct: 604 TRDNRVLNDISVEHFTNTILEE 625 >gi|328957405|ref|YP_004374791.1| proline--tRNA ligase [Carnobacterium sp. 17-4] gi|328673729|gb|AEB29775.1| proline--tRNA ligase [Carnobacterium sp. 17-4] Length = 568 Score = 219 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 106/251 (42%), Positives = 155/251 (61%), Gaps = 1/251 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L++ P +AE+ SHK++LR G I Q S G+YS+LPL + L+ + I+REE Sbjct: 1 MKQSKLFIPTLRDVPNEAEVLSHKMLLRAGYIRQISSGVYSYLPLATRVLEKLKNIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P+L +LW ESGRY++YG++++ L DR+ + + GPTHEE T + R Sbjct: 61 FEKINAVEMLMPSLLPRELWEESGRYETYGEDLMTLQDRHGRDYLLGPTHEEAFTTLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP + YQIQ KFRDE RPR G++R REF+MKDAYSF + E +Y + Sbjct: 121 EITSYKRLPLSLYQIQTKFRDEKRPRSGLLRGREFIMKDAYSFHDSFESLDATYQDFEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GL + ++G +GG S EF+ L+D GE + S D+ E Sbjct: 181 YTRIFERCGLDFRNIIGDAGAMGGSNSKEFMALSDIGEDTIVYSDS-SDYSANLEMATSF 239 Query: 241 DIISLNSIVEQ 251 + + E+ Sbjct: 240 HMHKKSLENEK 250 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 61/187 (32%), Positives = 103/187 (55%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ + + P+ + V +GIE+GHIF GT+YS M+AT +G+ V MG Y Sbjct: 382 IDLRFVQEGELSPDGQGVLKFAKGIEIGHIFKLGTRYSESMNATVLDNNGRSIPVVMGCY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A+ E +G+ WP +AP+++ LI + + ++Y L G Sbjct: 442 GIGVSRLLSAITEQQSSEEGLNWPRHLAPYELHLIPVNMKADDQVNLSNELYTSLQNAGF 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 V DD E++G +F +DL+G P+++ VG K ++ VE+K R TG ++ EE+I+ Sbjct: 502 SVLLDDRNERVGVKFKDSDLIGMPIRITVGKK-AQENIVELKLRKTGEALEVRTEELIDT 560 Query: 438 ASHRFSN 444 + S+ Sbjct: 561 LNILLSS 567 >gi|289705162|ref|ZP_06501565.1| proline--tRNA ligase [Micrococcus luteus SK58] gi|289558106|gb|EFD51394.1| proline--tRNA ligase [Micrococcus luteus SK58] Length = 608 Score = 219 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 102/239 (42%), Positives = 142/239 (59%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+++P +AE+ASH+L++R G I + + GIYSWLPLG K L V I+REE Sbjct: 4 RMSTLFLRTLRDDPAEAEVASHRLLVRAGYIRRAAPGIYSWLPLGLKVLAQVERIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ P L + + +GR+D YG + RL DR + PTHEE+ T + + Sbjct: 64 DAIGAQEVHFPALLPREPYEATGRWDEYGDGLFRLQDRRGNDYLLAPTHEEMFTLLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSF + G +Y +Y Sbjct: 124 YSSYKDLPAYLYQIQTKYRDEARPRAGLLRGREFIMKDSYSFTVDDAGLDAAYEAHRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 LRIF RLGL+ +P+RA SG +GG S EF+ + GE S + + T Sbjct: 184 LRIFDRLGLEVVPVRATSGAMGGSRSEEFLHPTEVGEDTFVESDGGYRANVEAVTTVAP 242 Score = 136 bits (343), Expect = 7e-30, Method: Composition-based stats. Identities = 58/176 (32%), Positives = 86/176 (48%), Gaps = 3/176 (1%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 + RG+E+GHIF G KY+ + GK V MGSYGIG R VAA+ E Sbjct: 435 GSGPLHTRRGMEMGHIFQLGRKYAEALDLKVLDVHGKQVVVTMGSYGIGITRAVAAIAER 494 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGS 390 HD KG+ WP +VAP + + + + A E + A L G V DD G Sbjct: 495 YHDDKGLAWPRAVAPADVH-VVVATKGEDGLAAAETLAAGLEAEGLTVLVDDRPKVSPGV 553 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 +F A+L+G P V+VG + ++D ++E+K R TG + ++ + + R Sbjct: 554 KFKDAELIGVPTAVVVG-RGLADGELELKDRATGEARPVPVDGAVAAVLAEVRDGR 608 >gi|237785730|ref|YP_002906435.1| prolyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385] gi|237758642|gb|ACR17892.1| Prolyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385] Length = 594 Score = 219 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 103/239 (43%), Positives = 143/239 (59%), Gaps = 1/239 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S F+ L+E+P DAE+ SHKL++R G I + + G+YSWLPLG K L N+ I+REE Sbjct: 8 RMSSLFVRTLREDPADAEVPSHKLLVRAGFIRRIAPGVYSWLPLGLKVLRNIERIVREEM 67 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L D + +GR+ YG + RL DR + GPTHEE+ T+ + Sbjct: 68 DGIGAQEIELPALLPRDAYEVTGRWTEYGDALFRLKDRKKGDYLLGPTHEEIFTETVKGE 127 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+M D+YSFD+ EG + SY K +Y Sbjct: 128 YSSYKDFPVTLYQIQTKYRDEERPRAGILRGREFVMCDSYSFDMKDEGLEESYQKHRAAY 187 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 R+F+RLGL A SG +GG S EF+ ++ GE F + D+ E Sbjct: 188 QRMFNRLGLDYAICAATSGAMGGSASEEFLAVSPVGE-DTFVTSTSSDYAANVEAVVTP 245 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 5/189 (2%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + K D P+ + +GIE+GHIF G KY+ +GK MG Sbjct: 407 GTIEAAEVKEGDPAPDGTGTLLLKQGIEIGHIFQLGRKYTNAFELDVLDENGKRSRPTMG 466 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R+VA V E HD KG+ WP SVAPF + L+ D +A + LS Sbjct: 467 SYGVGVSRLVAVVAEQYHDDKGLKWPVSVAPFPVHLVVAN-KDAEAAEAASTLAEELSNR 525 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G D+ +DD G +F ++LLG P V++G + + K+E++ RL E + +++ Sbjct: 526 GLDILFDDRPKVSPGVKFKDSELLGMPYVVVLG-RAFKEGKIEVRDRLADSVETVPVDDA 584 Query: 435 INYASHRFS 443 + + Sbjct: 585 AEHIARLVK 593 >gi|170016922|ref|YP_001727841.1| threonyl-tRNA synthetase [Leuconostoc citreum KM20] gi|238688955|sp|B1MXZ5|SYT_LEUCK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|169803779|gb|ACA82397.1| Threonyl-tRNA synthetase [Leuconostoc citreum KM20] Length = 653 Score = 219 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 146/445 (32%), Gaps = 36/445 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + RD + L + G+ WLP G V I +++ G Sbjct: 238 RREEAKERDHRTIGRDMDLF-FTSQEVGSGLPVWLPNGATIRRQVERYIIDKELANGYQH 296 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRN 127 + P L + +L+ SG +D Y ++M D + P + +F +SYR Sbjct: 297 VYTPVLSNLNLYKTSGHWDHYREDMFPPMDMGEGEFLELRPMNCPSHIMVFNHKPRSYRE 356 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 LP ++ + R E + + + + PE + + + + ++ Sbjct: 357 LPIRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVEPEKLEEEFKSILTMMMGVYRD 416 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS-ENTDFDDIISLN 246 + R D T+ + D M + DD+ Sbjct: 417 FNITDYRFRLS--------------YRDPENTEKYFDDDDMWEKSQAQLKRAMDDLKLDY 462 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y DV + +L + +S ++ F ++ + T+ GAD Sbjct: 463 YEAEGEAAFYGPKLDVQTKT---ALGSEETMSTIQLD----FLLPERF----NLTYIGAD 511 Query: 307 GKDHYV--QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 G+D++ + +G M A + + G W ++P ++ +I + D Sbjct: 512 GQDNHRPVMLHRGIVGTMERFTAYLIEMYKGAFPTW---LSPLQVQIIPVNLG--AHGDY 566 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 I A+L G + ++G A P +++G V V ++ Sbjct: 567 ANDIQAQLQAAGLRAHVETKDAKMGYLIREAQTNKIPYTLVLGDSEVDGQTVTVRKYGEE 626 Query: 425 IREDMSLEEVINYASHRFSNN-RPV 448 M + + +N RPV Sbjct: 627 KTRTMRFADFQSEILADVANYSRPV 651 >gi|188588550|ref|YP_001919768.1| threonyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43] gi|238689641|sp|B2UYW3|SYT_CLOBA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|188498831|gb|ACD51967.1| threonyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43] Length = 643 Score = 219 bits (559), Expect = 6e-55, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 152/445 (34%), Gaps = 35/445 (7%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y I + RD +L L T +G+ +P G K + + + +E+ R Sbjct: 228 EYLEAIEEAKKRDHNKLGRELKLFTT-DENVGQGLPLLMPKGAKIVQTLQRWVEDEEERR 286 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA--MIYGPTHEEVMTDIFRSHI 122 G + P + +DL+ SG +D Y M L D P I+ + Sbjct: 287 GYVLTKTPLMAKSDLYKISGHWDHYKDGMFVLGDEEKDEEVFALRPMTCPFQYTIYNAEQ 346 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+LP + + FR+E G++R R+F +TPE + + + Sbjct: 347 HSYRDLPIRYGETSTLFRNESSGEMHGLIRVRQFT-LADGHLIVTPEQLEEEFKGVLELI 405 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + LG I D+S+ F + + + + T D Sbjct: 406 QYLMKTLG------------IDEDISYRFSKWDPNNTEKYINDPEAWNKTQDTMRTILDH 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + A Y D+ + + + I+ + + Sbjct: 454 LKINYVEADDEAAFYGPKLDLQCRNVH---GKEDTLFTVQIDFAL--------AERFDMS 502 Query: 302 FKGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +G+ + IG A++ + +P ++P ++ ++ I Sbjct: 503 YIDKNGEKKRPYIIHRSSIGCYERTLAMLI---EKYAGAFPTWLSPVQVKVLPISDK--- 556 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D E + L G + D E+IG + A L P ++VG K ++++V ++ Sbjct: 557 YNDYAESVVKSLRNKGVRIEADYRAEKIGYKIREARLERTPYILVVGEKEAANNEVSVRS 616 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R + L+ + + Sbjct: 617 RKNDDEGAIKLDAFTERLLNEIATK 641 >gi|328885400|emb|CCA58639.1| Prolyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712] Length = 566 Score = 219 bits (559), Expect = 6e-55, Method: Composition-based stats. Identities = 104/239 (43%), Positives = 146/239 (61%), Gaps = 1/239 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ L+++P DAE+ SHKL++R G + + + GI+SWLPLG+K L N+ I+REE Sbjct: 8 RMSQLMAKTLRDDPADAEVLSHKLLVRAGYVRRTAAGIWSWLPLGKKVLSNIERIVREEM 67 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+++P L + + +GR+D YG E+ RL DR + GPTHEE+ T + + Sbjct: 68 DAIGAQEVTLPALLPREPYEATGRWDEYGAELFRLQDRKGGDYLLGPTHEEIFTLLVKDQ 127 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ KFRDE RPR G++R REFLMKD+YSFD EG SY +Y Sbjct: 128 CSSYKDLPVILYQIQNKFRDEARPRAGILRGREFLMKDSYSFDTEDEGLAQSYALHRQAY 187 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 R+F RLGL + A +G +GG S EF+ A+ GE F DF +E ++ Sbjct: 188 QRVFERLGLDYRIVAATAGAMGGSKSEEFLAPAEAGE-DTFADCPNCDFAANTEAISYE 245 Score = 133 bits (334), Expect = 6e-29, Method: Composition-based stats. Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 6/174 (3%) Query: 269 DSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+ R IE+GHIF G KY+ + G +GK V MGSYGIG R VA Sbjct: 395 DPCPKCGTGLKLDRAIEIGHIFQLGRKYADALKLDVLGQNGKPVRVTMGSYGIGVSRAVA 454 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-G 385 A+ E + D KG+ WP VAP + + A + + ++ +LS G V DD G Sbjct: 455 ALAEQTADEKGLCWPAEVAPADVH--VVAAGKALQTELALEVSDKLSAAGLRVLVDDRAG 512 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 G +F A+L+G P ++ G + + VE+K R TG RE++++EE + + Sbjct: 513 VSPGVKFTDAELMGVPKILVAGRRS-GEGIVELKDRRTGDREELTVEEALTRLT 565 >gi|71984184|ref|NP_001022033.1| Threonyl tRNA Synthetase family member (trs-1) [Caenorhabditis elegans] gi|1711653|sp|P52709|SYTC_CAEEL RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|3875006|emb|CAA93762.1| C. elegans protein C47D12.6a, confirmed by transcript evidence [Caenorhabditis elegans] Length = 725 Score = 219 bits (559), Expect = 6e-55, Method: Composition-based stats. Identities = 71/433 (16%), Positives = 148/433 (34%), Gaps = 43/433 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L HQ S G W P G + + IR++ R G E+ Sbjct: 315 EEAAKRDHRKLGKEHDLF--FFHQLSPGSAFWYPKGAHIYNKLVDFIRKQYRRRGFTEVI 372 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + + LW SG + Y ++M + + + P + +F +Y LPF Sbjct: 373 TPNMYNKKLWETSGHWQHYSEDMFK-IEVEKEEFGLKPMNCPGHCLMFGHMPHTYNELPF 431 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F + R+E+ G+ R R F DA+ F + S+ + + ++ Sbjct: 432 RFADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCRQDQISEE-IKQCLDFLEYAYEKVF 490 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + + P G + E D + + Sbjct: 491 GFTFKLNLSTRPEGFLGNIE-----------------TWDKAEADLTNALNASGRKWVLN 533 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L N + + ++ F ++ ++ G+ Sbjct: 534 PGDGAFYGPKIDI---TIQDALKRNFQCATIQLD----FQLPNQFD----LSYFDEKGEK 582 Query: 310 HYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 M + R+ A + ES + RD Sbjct: 583 QRPVMIHRAVLGSVERMTAILTESYGGKWPFWLSPRQCKIITV-------HESVRDYAND 635 Query: 368 IYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + ++ + G ++ +++ G+ + Q A L F +++G+K + V ++ R +R Sbjct: 636 VKKQIFEAGFEIEYEENCGDTMNKQVRKAQLAQFNFILVIGAKEKENGTVNVRTRDNAVR 695 Query: 427 EDMSLEEVINYAS 439 +++L+++I+ Sbjct: 696 GEVALDKLISKFR 708 >gi|300087319|ref|YP_003757841.1| prolyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527052|gb|ADJ25520.1| prolyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 573 Score = 219 bits (559), Expect = 6e-55, Method: Composition-based stats. Identities = 106/272 (38%), Positives = 155/272 (56%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F +E P +AE SH+L+LR GMI Q + G+YS+LP + + IIR+E Sbjct: 1 MRLSQLFGKTQREIPGEAETISHRLLLRAGMIAQLTAGVYSYLPPAWRTSRKIMDIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+++P LQ +LW +SGR ++G + +L DR + + GPTHEEV++D+ Sbjct: 61 MDAAGCQEITMPVLQPIELWQKSGRGAAFGDNLFQLTDRKEHTLALGPTHEEVVSDLASR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I+SYR+LP YQIQ K RDE RPR G++R REF+MKD YSFD G + SY +M + Sbjct: 121 YIQSYRDLPQRLYQIQTKLRDEPRPRGGLIRVREFIMKDMYSFDADEAGLEESYQRMVQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y I+ R GLK++ + A+SG IGG SHEF+VLA++GE +V + Sbjct: 181 YKNIYRRCGLKAMAIEADSGAIGGKASHEFMVLAESGEDEVIFCAGCGYAANKEKAVFNK 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 + + + + F LP Sbjct: 241 GKTEPEAPLPTEEVATPGREAIEDVADFLGLP 272 Score = 159 bits (402), Expect = 9e-37, Method: Composition-based stats. Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 2/188 (1%) Query: 259 TSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 T+D+ + + + RGIEVGH+F GT + A + A+G MG Sbjct: 377 TTDIASAAVGAKCARCGGTLDATRGIEVGHVFKLGTFLAETFGAVYTDAEGNQKPCIMGC 436 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R++AA IE +HD KGIIWP +AP+++ L + ++ R A EK+Y L+ G Sbjct: 437 YGIGIGRLLAAAIEQNHDDKGIIWPMPIAPWQVHLTGLGLENEPVRAAAEKLYGELTSAG 496 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V +DD E G +F ADLLG PL++ + + + VE+K R E + +EV+ Sbjct: 497 IEVLYDDRPESPGVKFNDADLLGMPLRLTISPRSMDKGSVEVKQRAEKAFELVPADEVVE 556 Query: 437 YASHRFSN 444 S+ Sbjct: 557 VTRKLVSD 564 >gi|294631730|ref|ZP_06710290.1| prolyl-tRNA synthetase [Streptomyces sp. e14] gi|292835063|gb|EFF93412.1| prolyl-tRNA synthetase [Streptomyces sp. e14] Length = 567 Score = 219 bits (559), Expect = 6e-55, Method: Composition-based stats. Identities = 103/239 (43%), Positives = 144/239 (60%), Gaps = 1/239 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ L+++P DAE+ SHKL++R G + + + G++SWLPLG++ L NV I+REE Sbjct: 8 RMSQLMAKTLRDDPADAEVLSHKLLVRAGYVRRTAAGVWSWLPLGRRVLANVERIVREEM 67 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + +GR+D YG E+ RL DR + GPTHEE+ T + + Sbjct: 68 DAIGAQEVLLPALLPKEPYEATGRWDEYGGELFRLKDRKGGDYLLGPTHEEIFTLLVKDQ 127 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REFLMKD+YSFD EG SY +Y Sbjct: 128 ASSYKDLPVILYQIQSKYRDEARPRAGILRGREFLMKDSYSFDTADEGLAESYALHRQAY 187 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 RIF RLGL A +G +GG S EF+ A+ GE F DF +E ++ Sbjct: 188 QRIFERLGLDYRICAATAGAMGGSKSEEFLAPAEAGE-DTFADCPNCDFAANTEAITYE 245 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 57/173 (32%), Positives = 88/173 (50%), Gaps = 6/173 (3%) Query: 270 SLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 P+ R IE+GHIF G KY+ + G +GK V MGSYGIG R VAA Sbjct: 397 PCPKCGTGLKLDRAIEIGHIFQLGRKYTDALKLDVLGQNGKPVRVTMGSYGIGVSRAVAA 456 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GE 386 + E D G++WP VAP + + A + + + +L+ G V DD G Sbjct: 457 LAEQHADEHGLVWPAEVAPADVH--VVAAGKALQTEVALDVSQKLAAAGVRVLVDDRAGV 514 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 G +F A+L+G P ++ G + + +E+K+R TG RE++++EE + + Sbjct: 515 SPGVKFTDAELIGVPQILVAGRR-AGEGVLELKNRRTGEREELTVEEALTRLT 566 >gi|194014474|ref|ZP_03053091.1| prolyl-tRNA synthetase [Bacillus pumilus ATCC 7061] gi|194013500|gb|EDW23065.1| prolyl-tRNA synthetase [Bacillus pumilus ATCC 7061] Length = 565 Score = 219 bits (559), Expect = 6e-55, Method: Composition-based stats. Identities = 111/231 (48%), Positives = 159/231 (68%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DAE SH+L++R G I Q++ GIY +LPL K + ++ +I+R+E Sbjct: 1 MRQSLTFIPTLREVPADAEAKSHQLLVRAGFIRQNTSGIYHYLPLAHKVIQHIQSIVRKE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P LQ A++W ESGR+ +YG E++R+ DR+ + GPTHEEV+T + RS Sbjct: 61 MEKAGAAELLMPVLQQAEMWQESGRWYTYGPELMRMKDRHGREFALGPTHEEVITSLVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF +PE +YNKMF + Sbjct: 121 EVKSYKKLPLTLYQIQSKFRDEQRPRFGLLRGREFIMKDAYSFHSSPESLDDTYNKMFTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 Y +F ++GL P+ A+SG +GG +HEF+ L++ GE + S Sbjct: 181 YSNVFSKVGLNFRPVIADSGAMGGKDTHEFMALSEVGEDTIAYSDTSSYAA 231 Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 64/182 (35%), Positives = 108/182 (59%), Gaps = 3/182 (1%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ + D P+ + +GIEVG +F GT+YS M AT+ +G+ + MG YG Sbjct: 384 DLRLIQEGDVSPDGEGTIQFAKGIEVGQVFKLGTRYSESMDATYLDENGRAQPMIMGCYG 443 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R ++A++E HD KGIIWP++VAP+ + L+ + + ++ E +Y RL G D Sbjct: 444 IGISRTLSAIVEQHHDEKGIIWPEAVAPYDLHLLALNMKNDAQKELAETLYERLEDEGFD 503 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V +DD E+ G +FA +DL+G P+++ G + + VE+K R +G ++S++E+I++ Sbjct: 504 VLFDDRQERAGVKFADSDLIGLPIRISCGKRS-EEGIVEVKFRKSGESHEVSVDELISFI 562 Query: 439 SH 440 Sbjct: 563 RQ 564 >gi|51598972|ref|YP_073160.1| threonyl-tRNA synthetase [Borrelia garinii PBi] gi|73919774|sp|Q660F3|SYT_BORGA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|51573543|gb|AAU07568.1| threonyl-tRNA synthetase [Borrelia garinii PBi] Length = 582 Score = 219 bits (559), Expect = 6e-55, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 156/444 (35%), Gaps = 39/444 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L + +E RD +L L + + G+ + P G K + REE ++ Sbjct: 172 RSYLNLREEIKKRDHRKLGKELDLFSIH-EEIGPGLIFFHPNGAKIRALIEDFWREEHSK 230 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + LW SG + Y M + + P + I+ + Sbjct: 231 NGYDILFTPHVGKSWLWQTSGHLNFYKDSMFEKIEMDKSDYYLKPMNCPFHIAIYNTGKH 290 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LPF + ++ +R E G+MR+R F DA+ + ++ + Sbjct: 291 SYRDLPFRWAELGTVYRYEKIGALHGMMRARGFTQDDAHIICTHSQVVDE-IKEVLRFAI 349 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ + G S+ + P + + + + D Sbjct: 350 YMWSKFGFNSLKAYLSTKP-----------------DKSVGNNSDWEMSLKVLKEALSDF 392 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I + A Y D+ K+ DSL ++S + F ++++ T+ Sbjct: 393 EVPYEIDKGGGAFYGPKIDL---KIVDSLEREWQMSTIQFD----FNLPERFNM----TY 441 Query: 303 KGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 DG + + +G++ ++ + G +W V I + NI Sbjct: 442 TSEDGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPLWLSHVQAVIIPVNNI------V 495 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D K++ + G + D+ ++ ++ P I+G + + ++ I+ R Sbjct: 496 EDYTIKVFNKFKNAGIRIKLDNSSSRMNAKIREYQAKKIPYMFIIGEREAIEERISIRTR 555 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + L+E + + + Sbjct: 556 TNEQINGIELDEALKLILLKVRDK 579 >gi|227908819|ref|NP_758514.2| probable threonyl-tRNA synthetase 2, cytoplasmic [Mus musculus] gi|81896660|sp|Q8BLY2|SYTC2_MOUSE RecName: Full=Probable threonyl-tRNA synthetase 2, cytoplasmic; AltName: Full=Threonine--tRNA ligase; Short=ThrRS; AltName: Full=Threonyl-tRNA synthetase-like protein 2 gi|26334063|dbj|BAC30749.1| unnamed protein product [Mus musculus] Length = 790 Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats. Identities = 79/448 (17%), Positives = 154/448 (34%), Gaps = 42/448 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD + L H S G +LP G + + IREE Sbjct: 373 KMMKDWEKFQEEAKSRDHRKIGKEQELF--FFHDLSPGSCFFLPRGAFIYNALMDFIREE 430 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ E+ P + ++ LW SG + Y M D P + +F Sbjct: 431 YHKRNFTEVLSPNMYNSKLWETSGHWQHYSNNMFTF-DVEKDTFALKPMNCPGHCLMFAH 489 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R +P F + R+EL G+ R R F DA+ F + + + Sbjct: 490 RPRSWREMPVRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCMVEQ-IEEEIKGCLH 548 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E D Sbjct: 549 FLQSVYSTFGFSFQLN-LSTRPEHFLGEIE-----------------IWDEAERQLQNSL 590 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + I A Y D+ K+ D++ + + ++ F +++L Sbjct: 591 VEFGKPWKINPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRFNLTYV 643 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K+ V + +G++ + A++ + G WP ++P ++ +I + Sbjct: 644 SK--DGDDKNRPVIIHRAILGSVERMIAILS---ENYGGKWPLWLSPRQVMVIPVGP--- 695 Query: 360 VCRDACEKIYARLSKVGC--DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 C + ++ + G DV DD + + A L + ++VG K ++ V Sbjct: 696 ACENYALQVSKECFEEGFMADVDLDDS-CTLNKKIRNAQLAQYNFILVVGEKEKINNAVN 754 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ R I ++S+ VI + + Sbjct: 755 VRTRDNKIHGEISIASVIEKLKNLKKSR 782 >gi|319441431|ref|ZP_07990587.1| prolyl-tRNA synthetase [Corynebacterium variabile DSM 44702] Length = 585 Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats. Identities = 120/385 (31%), Positives = 176/385 (45%), Gaps = 23/385 (5%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S +FL L+E+P DAE+ SHKL++R G I + + G+YSWLPLG + L N+ AI+R E Sbjct: 4 RMSSFFLRTLREDPADAEVPSHKLLVRAGYIRRVTPGVYSWLPLGLRVLHNIEAIVRREM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+ +P L + + S R+ YG +LRL DR + GPTHEE+ TD+ + Sbjct: 64 NAIGAQEIRLPALLPREPYERSNRWTEYGDSLLRLKDRKGADYLLGPTHEEMFTDLVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSF + G +Y V+Y Sbjct: 124 YSSYKDFPVTLYQIQTKYRDEERPRAGILRGREFIMKDSYSFTMDDAGLDEAYQAHRVAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF LG++ A SG +GG S EF+ ++ +GE F D+ E Sbjct: 184 QRIFDSLGVEYAICAATSGAMGGSASEEFLAVSASGE-DTFVRATDGDYAANVEAVITPA 242 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 P A + + D+L + R ++ G T + Sbjct: 243 PAERPID----GQPEAKVYETPDATTMDTLLDWARSEGLEVD-GRPAEL-TDTLKCLVVK 296 Query: 302 FKGADGKDHYVQMGSYG--IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 G+ + G M+ + A +E + + PF + Sbjct: 297 ITEPGGEPELTGVLLPGDREADMKRLEASLEPAVVELASDEDFAKNPFLVKGYVGPKG-- 354 Query: 360 VCRDACEKIYARLSKVGCDVFWDDM 384 L+ G V D Sbjct: 355 ------------LADNGIKVLADPR 367 Score = 136 bits (341), Expect = 9e-30, Method: Composition-based stats. Identities = 60/187 (32%), Positives = 92/187 (49%), Gaps = 5/187 (2%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 + + D+ PE RGIE+GHIF G KY+ +GK MG Sbjct: 398 GFIEAAEIREGDAAPEGMGTLTLERGIEIGHIFQLGRKYTEAFDVKILDENGKRSVPTMG 457 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R++A + E HD KG+ WP +VAPF + + I D +A + L Sbjct: 458 SYGLGVSRLIAVLAEQMHDDKGLRWPTTVAPFDVH-VVIANKDAAAGEAAGSLAGELDAA 516 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +D+ G +F A+LLG PL VIVG + ++ VE+++RLTG +++ + Sbjct: 517 GLEVIFDERPKVGPGVKFKDAELLGMPLVVIVG-RGFAEGTVELRNRLTGETTNIAYGDA 575 Query: 435 INYASHR 441 + Sbjct: 576 VATIREL 582 >gi|189485415|ref|YP_001956356.1| prolyl-tRNA synthetase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|226701354|sp|B1H063|SYP_UNCTG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|170287374|dbj|BAG13895.1| prolyl-tRNA synthetase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 569 Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats. Identities = 118/264 (44%), Positives = 153/264 (57%), Gaps = 2/264 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK +P L+E P DA+I S KLM+R+GMI + + G Y LPLG K L V IIR+E Sbjct: 1 MFFSKMLIPTLKEAPSDADIVSVKLMVRSGMIRKLASGFYELLPLGLKVLRKVENIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N G E+ P + LW+E+ R+++YGKE+ +L DR D PT EEV+TD+ R Sbjct: 61 MNSAGGQEVIFPLVFPKALWLETDRWNAYGKELFKLKDRKDAEFCLAPTAEEVVTDLIRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQ KFRDE+RPRFGVMRSREFLMKDAYSF + Y MF + Sbjct: 121 DIKSYKQLPVMLYQFGTKFRDEIRPRFGVMRSREFLMKDAYSFHADEADLEKYYKTMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSENTDF 239 Y I + G + + A SG IGG SHEF+VL DTGE ++ +CS + +E Sbjct: 181 YTNICIKCGFQFRAVEAASGVIGGSFSHEFMVLTDTGEEEMTWCSCGYGANSAKTECLKI 240 Query: 240 DDIISLNSIVEQ-WTAPYAATSDV 262 + E+ +T A DV Sbjct: 241 EQSKEEPLPSEEIFTTDVCAIEDV 264 Score = 164 bits (415), Expect = 3e-38, Method: Composition-based stats. Identities = 86/358 (24%), Positives = 147/358 (41%), Gaps = 13/358 (3%) Query: 88 SYGKEMLRLADRNDKAMI---YGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELR 144 S+ E + L D ++ M G T+ + LP E Sbjct: 205 SFSHEFMVLTDTGEEEMTWCSCGYGANSAKTECLKIEQSKEEPLPSEEIFTTDVCAIEDV 264 Query: 145 PRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGG 204 + + ++F+ Y D P + + ++ Sbjct: 265 AKLLNLSPKKFIKTMIYIADKKPVAVLVRGDYEINEIKLQTLLGADGMLLADEQTVISVT 324 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 + F A ++ + + D N ++ +D+ Sbjct: 325 NAPIGFAGPAGLKNIKIIADLSVAELSNALTGANKKDYHLKNVNFKRDYNAD-IVADIRK 383 Query: 265 EKLFDSLPENK---RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGA 321 K D+ P K +RGIE+GH F G KYS M+A++ A+GK+ ++ MG YGIG Sbjct: 384 VKRGDTCPRCKKEELKFSRGIEIGHTFKLGDKYSKSMNASYLDANGKEKFIIMGCYGIGV 443 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 R++AA+IE SHD GIIW +++APF++ ++ + D+ ++ EKIY LS G DV Sbjct: 444 TRILAAIIEQSHDDDGIIWTNNIAPFEVVIVPLNYADEKTKETTEKIYKELSSKGLDVLI 503 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 DD E+ G +F ADL+G P ++ + K +++ VE+K R G ++ + Sbjct: 504 DDRDERAGIKFKDADLIGIPYRITISEKNLANGNVELKARRDGK------DDAVRLFK 555 >gi|86607055|ref|YP_475818.1| threonyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab] gi|86555597|gb|ABD00555.1| threonyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab] Length = 603 Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats. Identities = 68/444 (15%), Positives = 142/444 (31%), Gaps = 42/444 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + L+E R D +L L + G+ W P G + +++EQ + G Sbjct: 192 YKRRLEEAKRRDHRKLGKELGLFI-FADEVGPGLPLWTPKGTTLRWVLEDFLKQEQLKRG 250 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA------MIYGPTHEEVMTDIFR 119 + + P + DL+ SG + Y ++M + +++A + P + I++ Sbjct: 251 YLPVVTPHIARVDLFKISGHWQKYREDMFPMMAESEEARAAEQGFVMKPMNCPFHIQIYK 310 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 S ++SYR+LP + + +R E G + D + P+ + + K+ Sbjct: 311 SELRSYRDLPLRYAEFGTVYRYEQSGELGGLTRVRGFTVDDAHLFVRPDQLEEEFLKVVD 370 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L +F +L LK R D + S + D + Sbjct: 371 LILVVFDKLKLKDFRARLS--------------FRDPKSDKYLGSPEEWDMAENAIRRAV 416 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + + A Y D D+L ++ ++ + F Sbjct: 417 EKLSMPHFEGIGEAAFYGPKLDFI---FRDALDREWQLGTVQVDYQNPQRFD-------- 465 Query: 300 ATFKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + DG M R++ +IE Sbjct: 466 LYYVAEDGSRQRPVMIHRAPFGSLERLIGILIEEYAGDFPFWLAPEQVRILPV------- 518 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 ++ +L + G V D +++ + A+ P +IVG K + V Sbjct: 519 SDQYLGYATQVRDQLREQGIRVHIDADSDRLPKKIRNAEKAKVPFMLIVGEKEQATGTVS 578 Query: 418 IKHRLTGIREDMSLEEVINYASHR 441 ++ R +++ + ++ Sbjct: 579 VRQRHGKDLGSLTVADFLDQVQAL 602 >gi|19113156|ref|NP_596364.1| cytoplasmic threonine-tRNA ligase Trs1 (predicted) [Schizosaccharomyces pombe 972h-] gi|3183175|sp|P87144|SYTC_SCHPO RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|2104451|emb|CAB08788.1| cytoplasmic threonine-tRNA ligase Trs1 (predicted) [Schizosaccharomyces pombe] Length = 703 Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats. Identities = 74/437 (16%), Positives = 153/437 (35%), Gaps = 45/437 (10%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ K FL + RD L ++ S G +LP G + + + +R + Sbjct: 276 MQEYKTFLA--EAAKRDHRKIGRDQELF--FFNEISPGSCFFLPHGARIYNTLLKYMRYQ 331 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G E+ P + + +LW SG +++Y + M D + P + +F+S Sbjct: 332 YSKRGYQEVITPNMYNVNLWKTSGHWNNYSENMFSF-DIEKEKYALKPMNCPGHCVMFKS 390 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SYR+LP+ + R+E G+ R R F DA+ F + F Sbjct: 391 RDRSYRDLPWRVADFGVLHRNEFSGALSGLTRVRRFQQDDAHIFCTPDQVRSE-IEGCFD 449 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + + P E + D Sbjct: 450 FLKEVYGTFGFTF-HLELSTRP----------------EEKYLGDLATWDKAEAQLKAAL 492 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D + A Y D+ +FD+L + + ++ F ++ L Sbjct: 493 DASGYKWELNAGDGAFYGPKIDI---TVFDALKRQHQCATIQLD----FQLPERFQLEFH 545 Query: 300 A--------TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 A + V + +G++ + A++ + WP ++P ++ + Sbjct: 546 APASAEEAKESGNNNKYTRPVMVHRAILGSLERMIAILT---EHYAGKWPFWMSPRQVCI 602 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 I + + +K++ LS+ V D + + A L + +VG++ Sbjct: 603 IPV---SAAAYNYADKVHNILSEADIFVDTDKSDNTLPKKIRNAQLAQYNFIFVVGAEEE 659 Query: 412 SDSKVEIKHRLTGIRED 428 S + V +++R ++ Sbjct: 660 STNSVNVRNRDDPKKQS 676 >gi|302682704|ref|XP_003031033.1| hypothetical protein SCHCODRAFT_77271 [Schizophyllum commune H4-8] gi|300104725|gb|EFI96130.1| hypothetical protein SCHCODRAFT_77271 [Schizophyllum commune H4-8] Length = 728 Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats. Identities = 68/440 (15%), Positives = 140/440 (31%), Gaps = 44/440 (10%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD + L H S G +LP G + + + ++R E + G E+ Sbjct: 318 EAAKRDHRKIGREQELF--FFHDLSPGSCFFLPHGTRIYNTLIELMRSEYFKRGYQEVIS 375 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + +A LW SG +++Y +M L D P + IF S +SYR LP Sbjct: 376 PNMYNAKLWETSGHWENYKDDMFTL-DIEKDNWALKPMNCPGHCLIFDSRDRSYRELPIR 434 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + + R+E G+ R R F+ D + F + P + +F ++ G Sbjct: 435 MAEFGIIHRNEASGALSGLTRVRRFVQDDTHIFCM-PSQVEAEMAGLFDFMQHVYGIFG- 492 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD-IISLNSIV 249 EF + T + + + + + Sbjct: 493 -----------------FEFHLELSTRPEKYLGEVETWNAAEDQLKQALEKYYPGKWELN 535 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + + ++ F +++L + + + Sbjct: 536 PGDGAFYGPKIDI---TIRDALKRAYQCATIQLD----FQLPQRFNLKYRSN--NEEVQR 586 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + + R VA E K + ++ Sbjct: 587 PIIIHRAILGSIERFVAIATEHFAGKWPFWLSPRQVLVIPVAAPYK-------EYASEVA 639 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT-GIRED 428 LSK D+ + + ++ + ++VG + V +++R G + Sbjct: 640 ETLSKANLYAEVDNSDNTLQKKIRNGEIAQYNFILVVGETELESKSVNVRNRDDVGTKAR 699 Query: 429 ---MSLEEVINYASHRFSNN 445 + L ++++ + Sbjct: 700 SATIPLADIVDKLVKLKESR 719 >gi|170748342|ref|YP_001754602.1| threonyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831] gi|170654864|gb|ACB23919.1| threonyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831] Length = 675 Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats. Identities = 76/443 (17%), Positives = 137/443 (30%), Gaps = 40/443 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E R D ++ L + G+ W G + A +R R Sbjct: 232 YLHRLEEAERRDHRRLGREMDLF--HFQEEGPGVVFWHAKGWTIFQELIAYMRRRL-RGD 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-----KAMIYGPTHEEVMTDIFRS 120 E++ P + LW SG + Y + M + + P + IF+ Sbjct: 289 YAEVNAPQILDKALWETSGHWGWYRENMFAAQSAGEEAEDKRWFALKPMNCPGHVQIFKH 348 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + + R E G+MR R F DA+ F + + Sbjct: 349 GLKSYRDLPLRMAEFGIVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEDQLADECLKIN-D 407 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L + G I ++ + P S A+ T+V + T Sbjct: 408 LILSTYADFGFDQIVVKLSTRPEKRVGSDALWDHAEDVMTRVLA--QIEEQSGGRIRTAV 465 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + A Y + L D++ + + ++ FG Sbjct: 466 N---------PGEGAFYGPKFEY---VLRDAIGRDWQCGTTQVDFNLPERFG-------- 505 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + ADG + G+M ++ G +W V ++ Sbjct: 506 AFYIDADGARKPPVMVHRAICGSMERFTGILIEHFAGHFPLWLAPVQVVVATITG----- 560 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + L + G V D E+I + L P+ + +G + + V I Sbjct: 561 -EADAYARDVIRTLERAGLRVEADLRNEKINYKVREHSLAKVPVLLALGRREAEERTVSI 619 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + + L E + Sbjct: 620 RRLGSQQTRTLPLTEAVAAFVEE 642 >gi|71984192|ref|NP_001022034.1| Threonyl tRNA Synthetase family member (trs-1) [Caenorhabditis elegans] gi|30145813|emb|CAD89723.1| C. elegans protein C47D12.6b, confirmed by transcript evidence [Caenorhabditis elegans] Length = 684 Score = 219 bits (558), Expect = 7e-55, Method: Composition-based stats. Identities = 71/433 (16%), Positives = 148/433 (34%), Gaps = 43/433 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L HQ S G W P G + + IR++ R G E+ Sbjct: 274 EEAAKRDHRKLGKEHDLF--FFHQLSPGSAFWYPKGAHIYNKLVDFIRKQYRRRGFTEVI 331 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + + LW SG + Y ++M + + + P + +F +Y LPF Sbjct: 332 TPNMYNKKLWETSGHWQHYSEDMFK-IEVEKEEFGLKPMNCPGHCLMFGHMPHTYNELPF 390 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F + R+E+ G+ R R F DA+ F + S+ + + ++ Sbjct: 391 RFADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCRQDQISEE-IKQCLDFLEYAYEKVF 449 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + + P G + E D + + Sbjct: 450 GFTFKLNLSTRPEGFLGNIE-----------------TWDKAEADLTNALNASGRKWVLN 492 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L N + + ++ F ++ ++ G+ Sbjct: 493 PGDGAFYGPKIDI---TIQDALKRNFQCATIQLD----FQLPNQFD----LSYFDEKGEK 541 Query: 310 HYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 M + R+ A + ES + RD Sbjct: 542 QRPVMIHRAVLGSVERMTAILTESYGGKWPFWLSPRQCKIITV-------HESVRDYAND 594 Query: 368 IYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + ++ + G ++ +++ G+ + Q A L F +++G+K + V ++ R +R Sbjct: 595 VKKQIFEAGFEIEYEENCGDTMNKQVRKAQLAQFNFILVIGAKEKENGTVNVRTRDNAVR 654 Query: 427 EDMSLEEVINYAS 439 +++L+++I+ Sbjct: 655 GEVALDKLISKFR 667 >gi|241894947|ref|ZP_04782243.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Weissella paramesenteroides ATCC 33313] gi|241871665|gb|EER75416.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Weissella paramesenteroides ATCC 33313] Length = 699 Score = 219 bits (558), Expect = 7e-55, Method: Composition-based stats. Identities = 76/436 (17%), Positives = 153/436 (35%), Gaps = 32/436 (7%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD L + G+ W+P G + I + + + G + Sbjct: 280 EAKERDHRKIGADQDLF-FTSQEVGSGLAVWMPNGAAIRRTLERYIVDREVQDGYQHVYT 338 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRNLPF 130 P L + +L+ +SG +D Y +M D D P + +++ H +SYR+LPF Sbjct: 339 PVLSNLNLYKQSGHWDHYRDDMFPPMDMGDGEFLELRPMNCPSHIMVYKHHQRSYRDLPF 398 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 ++ + R E G+ R RE + D ++F + + F L++ + Sbjct: 399 RVAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVMLDQIEDE-----FKKILQLMVDVY 453 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 D + F + + DD+ Sbjct: 454 KDFDIT---------DYRFRLSYRDPKNTEKYFDDDEMWEKAQRMLKGAMDDMDLEYFEA 504 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 E A Y DV ++ +L + +S ++ F ++ T+ G+DG+ Sbjct: 505 EGEAAFYGPKLDV---QIKTALGGEETLSTIQLD----FLLPERFD----VTYVGSDGEL 553 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 H M G + + + +P +AP ++ +I + + + + + Sbjct: 554 HRPVMIHR--GIISTMERFTAYLTEMYKGAFPTWLAPHQVRIIPVNR--EAHGEFAQALT 609 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 RL K +D E++G A L P +++G + VS+ V I+ + Sbjct: 610 DRLVKQDIRADYDGRNEKLGYLIRNAQSLKIPYTLVIGDEEVSNDTVTIRRFGSRDTSVK 669 Query: 430 SLEEVINYASHRFSNN 445 S+++ +N+ Sbjct: 670 SVDQFETDLLADIANH 685 >gi|296089916|emb|CBI39735.3| unnamed protein product [Vitis vinifera] Length = 686 Score = 219 bits (558), Expect = 7e-55, Method: Composition-based stats. Identities = 75/441 (17%), Positives = 156/441 (35%), Gaps = 38/441 (8%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R +Y I + D + K L H S G + +LP G + + + I+ + Sbjct: 278 RLKEYIARIEEAKKYDHRLLGVKQELF--FCHPLSPGSWFFLPHGGRIYNKLMEFIKAQY 335 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G E+ PT+ + LW SG +Y + M + + + P + +F Sbjct: 336 RERGYHEVFSPTMYNMQLWETSGHAANYKENMF-VFEVEKQEFGLKPMNCPGHCLMFEHR 394 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP + R+E G+ R R F DA+ F K + Sbjct: 395 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCR-ESQIKDEVMGVLDF 453 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++ G ++ + P + + + + + Sbjct: 454 INYAYNIFGFTYE-LKLSTRP-----------------EKYLGDLETWEKAEAALTEALN 495 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 I E A Y D+ + D+L + + ++ F +++ L SA Sbjct: 496 QSGKPWEINEGDGAFYGPKIDI---SVSDALNRKFQCATLQLD----FQLPSRFDLSYSA 548 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 ++ V + +G++ + A++ + WP ++P + + + Q Sbjct: 549 E--DEAKRERPVMIHRAILGSVERMFAILL---EHYKGKWPFWLSPRQAIVCPVSEKSQ- 602 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ++ ++ + G V D +I + A L + ++VG + + +V ++ Sbjct: 603 --PYALQVRDQIHQAGYYVDVDTTDRKIQKKVREAQLAQYNFILVVGEEEANTRQVSVRV 660 Query: 421 RLTGIREDMSLEEVINYASHR 441 R G MS+E +++Y Sbjct: 661 RDKGDHSVMSMENLLSYFKSE 681 >gi|332670551|ref|YP_004453559.1| threonyl-tRNA synthetase [Cellulomonas fimi ATCC 484] gi|332339589|gb|AEE46172.1| threonyl-tRNA synthetase [Cellulomonas fimi ATCC 484] Length = 670 Score = 219 bits (558), Expect = 7e-55, Method: Composition-based stats. Identities = 67/457 (14%), Positives = 131/457 (28%), Gaps = 49/457 (10%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + G+ + P G + A R+ G Sbjct: 249 YLERVAEAERRDHRRLGSELDLFS-FPDEIGSGLAVFHPKGGLIRMEMEAYSRKRHVEAG 307 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEV 113 ++ P + L+ SG D Y M R + P + + Sbjct: 308 YSFVNTPHITKERLFQLSGHLDWYADGMYPPMHLDEELDDEGNVKRQGQNYYLKPMNCPM 367 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 ++RS +SYR LP ++ +R E G+ R+R F DA+ + + Sbjct: 368 HNLVYRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGMTRARGFTQDDAHIYCTLDQMKDE 427 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 ++ L + GL + + + D + Sbjct: 428 L-TRLLTFVLDLLKDYGLDDFYLELST----------------KNPEKFVGDDDVWERAT 470 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + A Y + + D++ ++S ++ F Sbjct: 471 ETLREVAQSSGLELVPDPGGAAFYGPKI---SVQAKDAIGRTWQMSTIQLD----FNLP- 522 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + DG + G++ AV+ + G W V + + Sbjct: 523 ---ELFELEYTAPDGSRQRPVMIHRALFGSIERFFAVLTEHYAGAFPAWLAPVQVLAVPV 579 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + E + A+L G D ++ G + A P +IVG + Sbjct: 580 A------EPFEPYLEDVVAQLRAEGIRAEIDRSDDRFGKKIRNASTQKIPFVLIVGGEDA 633 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 V ++R + + E + V Sbjct: 634 DAGAVSFRYRDGRQDNGVPVAEAVQRIVTAVRERAQV 670 >gi|78212243|ref|YP_381022.1| prolyl-tRNA synthetase [Synechococcus sp. CC9605] gi|114152271|sp|Q3ALR5|SYP_SYNSC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|78196702|gb|ABB34467.1| prolyl-tRNA synthetase [Synechococcus sp. CC9605] Length = 593 Score = 219 bits (558), Expect = 7e-55, Method: Composition-based stats. Identities = 114/277 (41%), Positives = 157/277 (56%), Gaps = 6/277 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P +AEI SH+L+LR G I + GIY++LPL + L + A++REE Sbjct: 1 MRVSRLLLVTLRDVPAEAEITSHQLLLRAGYIRRVGSGIYAYLPLMWRVLQKITAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 NR GA E +P L A+LW +SGR+ Y M L DR + + GPTHEEV+T + Sbjct: 61 MNRAGAQETLLPQLHPAELWQKSGRWQGYTAGEGIMFHLEDRQGRELGLGPTHEEVITSL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + + +Y M Sbjct: 121 AGELLRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHASEADLRETYGAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y RIF R GL ++P+ A+SG IGG S EF+V AD GE + S D + Sbjct: 181 DQAYRRIFERCGLDAVPVDADSGAIGGAASQEFMVTADAGEDLILISDDGQYAANLEKAV 240 Query: 238 DFDDIISLNSIVEQWTAP---YAATSDVHNEKLFDSL 271 S + + P + + + K +D Sbjct: 241 SIPSAASPLPDGPEESIPTPGLGSIESLCDTKCWDPS 277 Score = 156 bits (395), Expect = 6e-36, Method: Composition-based stats. Identities = 64/187 (34%), Positives = 91/187 (48%), Gaps = 4/187 (2%) Query: 259 TSDVHNEKLFDSLP---ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T D+ N + D E++ RGIEVGHIF G KYS M + F +GK MG Sbjct: 406 TLDLRNARAGDVCQHNLESRLTEKRGIEVGHIFQLGRKYSEAMESGFTNENGKTEPFWMG 465 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R+ A +E HD GI WP ++APF+ ++ D E +YA L Sbjct: 466 CYGIGVSRLAQAAVEQHHDDSGICWPTAIAPFEAIVVVANIQDDTQGQLGEALYAELQAA 525 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 DV DD E+ G +F ADL+G P +++VG + S+ VE+ R + + E + Sbjct: 526 DVDVLLDDRKERAGVKFKDADLIGIPWRIVVG-RDASEGIVELVRRSSREVRKLPHAEAV 584 Query: 436 NYASHRF 442 + Sbjct: 585 SCLIKAL 591 >gi|50294994|ref|XP_449908.1| hypothetical protein [Candida glabrata CBS 138] gi|49529222|emb|CAG62888.1| unnamed protein product [Candida glabrata] Length = 726 Score = 219 bits (558), Expect = 7e-55, Method: Composition-based stats. Identities = 70/441 (15%), Positives = 159/441 (36%), Gaps = 41/441 (9%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + + RD + L + ++ S G WLP G + + + ++R E + G E+ Sbjct: 315 EASMRDHRKIGKEQELF--LFNEMSPGSCFWLPHGTRIYNTLVDLLRSEYRKRGYEEVIT 372 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + ++ LW SG + +Y + M + P + +F++ +SYR LP+ Sbjct: 373 PNMYNSKLWETSGHWANYKENMFTFEVEKET-FGLKPMNCPGHCLMFKARERSYRELPWR 431 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + R+E G+ R R F DA+ F T + + +F Sbjct: 432 VADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFC-TQDQIEQEIENIFDFLKF------- 483 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + G EF + T + + D + + Sbjct: 484 -----------MYGVFGFEFKMELSTRPEKYVGELETWDAAEKKLENALNKWGGAWELNP 532 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA-DGKD 309 A Y D+ + D+L + + ++ F ++ L A + + Sbjct: 533 GDGAFYGPKIDIM---ISDALRRWHQCATIQLD----FQLPQRFELEFKAKDTEESENYE 585 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + +G++ + A++ + WP ++P +I ++ + ++ +++ Sbjct: 586 RPVMIHRAILGSVERMTAILT---EHFAGKWPFWLSPRQILVVPVGVK---YQEYAQQVR 639 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE-- 427 ++ G D G + + L+ + IVG ++++ V I++R ++ Sbjct: 640 DKMHNAGFYADVDLTGNTLQKKVRTGQLMKYNFIFIVGETEMNENSVNIRNRDVMEQQGK 699 Query: 428 --DMSLEEVINYASHRFSNNR 446 ++++ V+ + R Sbjct: 700 NATVNVDIVLEQLQKLKAEKR 720 >gi|73951031|ref|XP_857184.1| PREDICTED: similar to threonyl-tRNA synthetase-like 2 isoform 3 [Canis familiaris] Length = 711 Score = 219 bits (558), Expect = 7e-55, Method: Composition-based stats. Identities = 75/447 (16%), Positives = 153/447 (34%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD + L H S G +LP G + + IREE Sbjct: 294 KMMKTWEKFQEEAKNRDHRKVGKEQELF--FFHDLSPGSCFFLPRGAFIYNTLMDFIREE 351 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R E+ P + ++ LW SG + Y + M D P + +F Sbjct: 352 YHRRNFTEVLSPNMFNSKLWETSGHWQHYSENMFTF-DIEKDTFALKPMNCPGHCLMFAH 410 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R +P + R+EL G+ R R F DA+ F + + Sbjct: 411 RPRSWREMPVRLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQ-IEEEIKGCLQ 469 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G F + T + D Sbjct: 470 FLQSVYSTFGFS------------------FQLNLSTRPENFLGEVELWDEAEKQLQNSL 511 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + A Y D+ K+ D++ + + ++ F +++L Sbjct: 512 VEFGKPWKMNPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRFNLTYV 564 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K + V + +G++ + A++ + G WP ++P ++ +I + Sbjct: 565 SK--DGDDKRNPVIIHRAILGSVERMIAILS---ENYGGKWPFWLSPRQVMVIPVGP--- 616 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C ++ + + G D D + + A L + ++VG K +++ V + Sbjct: 617 TCEKYALQVSSAFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKTNNAVNV 676 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R I ++S+ I+ + + Sbjct: 677 RTRDNKIHGEISVTSAIHKLKNLKKSR 703 >gi|220919170|ref|YP_002494474.1| prolyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1] gi|254782880|sp|B8J9M0|SYP_ANAD2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|219957024|gb|ACL67408.1| prolyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1] Length = 574 Score = 219 bits (558), Expect = 7e-55, Method: Composition-based stats. Identities = 108/263 (41%), Positives = 148/263 (56%), Gaps = 3/263 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ F+P L+E P DA++ASHKL++R G I Q GIY +LPL +++L V AI+REE Sbjct: 5 RYSQAFIPTLKEAPADAQVASHKLLVRAGFIRQLGAGIYDYLPLAKRSLAKVEAIVREEM 64 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E +P L A++W ESGR+D G M RL DR G THEE+ T + R Sbjct: 65 DAIGGQEFYLPALHPAEIWKESGRWDVMGDNMFRLKDRKGGDYCLGMTHEEIFTAVARDE 124 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 ++SYR LP +YQIQ KFRDE RP+ G++R R+F MKDAYSFD+ G SY +Y Sbjct: 125 LRSYRQLPQVWYQIQTKFRDEPRPKSGLLRVRQFTMKDAYSFDVDRAGLDRSYEDQRRAY 184 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF---MDFPIPSENTD 238 +IF R GL + ++A SG +GG S EF+V D GE V + + Sbjct: 185 EKIFTRCGLDFVAVQAHSGSMGGSESSEFMVRTDAGEDLVAACPRCRYAANTETATSRVA 244 Query: 239 FDDIISLNSIVEQWTAPYAATSD 261 + E++ P T + Sbjct: 245 AEADGPGLGTPEKFATPGVVTIE 267 Score = 152 bits (385), Expect = 8e-35, Method: Composition-based stats. Identities = 71/192 (36%), Positives = 105/192 (54%), Gaps = 3/192 (1%) Query: 254 APYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A A +++ K + P + +E+GHIF GTKYS M AT A+GK Sbjct: 381 AHGATLAELRTVKAGEGCPRCDGTLDVFKALEIGHIFKLGTKYSESMKATVLDAEGKQVP 440 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + MGSYGIG R++AA IE HD GI++P ++APF +++ + + R A E++ A Sbjct: 441 IVMGSYGIGVERILAAAIELHHDDNGIVFPMAIAPFHATVLTLGP-EPELRKAAEEVVAA 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L K G +V +DD E+ G +F ADLLG P+++ VG K ++ VE K R G E + + Sbjct: 500 LGKEGVEVLFDDRDERAGVKFKDADLLGIPIRIAVGKKGLAAGNVEWKLRKGGAVELVPV 559 Query: 432 EEVINYASHRFS 443 EV A+ Sbjct: 560 GEVARKAAEAVR 571 >gi|330719257|ref|ZP_08313857.1| threonyl-tRNA synthetase [Leuconostoc fallax KCTC 3537] Length = 654 Score = 219 bits (558), Expect = 7e-55, Method: Composition-based stats. Identities = 70/441 (15%), Positives = 141/441 (31%), Gaps = 35/441 (7%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + RD L L + G+ WLP G V I +++ Sbjct: 236 LQRRQEAKERDHRNIGRDLDLF-FTSQEVGSGLPVWLPNGATIRRQVERYIVDKELSNDY 294 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSY 125 + + P L + +L+ SG ++ Y ++M D D P + I++ +SY Sbjct: 295 LHVYTPILSNLNLYKTSGHWEHYREDMFPPMDMGDGEFLELRPMNCPSHIMIYKHKPRSY 354 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 R LP ++ + R E + + + + PE + + + + ++ Sbjct: 355 RELPMRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVEPEKLEEEFKSILKMMMEVY 414 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDIIS 244 + R D T + D + T DD+ Sbjct: 415 EDFNITDYRFRLS--------------YRDPKNTAKYFDDDEMWEKSQKQLKTAMDDLGL 460 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y DV + +L + +S ++ F ++ ++ G Sbjct: 461 DYFEAEGEAAFYGPKLDVQTKT---ALGGEETLSTIQLD----FLLPERFD----LSYIG 509 Query: 305 ADG--KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG V + +G M A + + G W ++P ++ +I + Sbjct: 510 EDGKDNHRPVMLHRGIVGTMERFTAYLIEMYKGAFPTW---LSPLQVQIIPVNLG--AHG 564 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D +I +L G + ++G A P +++G V+D V ++ Sbjct: 565 DYARRIQQQLQVAGLRANVETKDAKMGYLIREAQTKKVPYTLVLGDNEVADETVTVRQYG 624 Query: 423 TGIREDMSLEEVINYASHRFS 443 + E +S+ + Sbjct: 625 SEKTETISIAAFEKLILADVA 645 >gi|296330872|ref|ZP_06873347.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674390|ref|YP_003866062.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] gi|296151877|gb|EFG92751.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412634|gb|ADM37753.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] Length = 564 Score = 219 bits (558), Expect = 8e-55, Method: Composition-based stats. Identities = 110/225 (48%), Positives = 151/225 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +P L+E P DAE SH+L+LR G I Q++ G+YS++PL K + N+ I+REE Sbjct: 1 MRQSLTLIPTLREVPADAEAKSHQLLLRAGFIRQNTSGVYSYMPLAYKVIQNIQQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P LQ A+ W ESGR+ +YG E++RL DR+ + G THEEV+T + R Sbjct: 61 MEKIDAVEMLMPALQQAETWQESGRWYTYGPELMRLKDRHGREFALGATHEEVITSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF T E +Y KM+ + Sbjct: 121 EVKSYKRLPLTLYQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHATEESLDETYQKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y IF R G+ P+ A+SG +GG +HEF+ L+ GE + S Sbjct: 181 YSNIFARCGINVRPVIADSGAMGGKDTHEFMALSAIGEDTIAYSD 225 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 68/191 (35%), Positives = 110/191 (57%), Gaps = 3/191 (1%) Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A +D+ K D P+ K GIEVG +F GT+YS M+AT+ +G+ Sbjct: 375 DAQIKEFADLRFIKEGDPSPDGKGTIRFAEGIEVGQVFKLGTRYSEAMNATYLDENGRAQ 434 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + MG YG+G R ++A+ E HD KG+IWP SVAP+ + ++ + + R+ EK+YA Sbjct: 435 PMLMGCYGVGVSRTLSAIAEQHHDDKGLIWPKSVAPYDLHILALNMKNDSQRELAEKLYA 494 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L G +V +DD E+ G +FA +DL+G P+++ VG + + VE+K R TG ++S Sbjct: 495 NLKAEGYEVLYDDRAERAGVKFADSDLIGLPIRITVGKR-ADEGIVEVKIRQTGESTEVS 553 Query: 431 LEEVINYASHR 441 ++E+ + S + Sbjct: 554 VDELTAFISKQ 564 >gi|86149734|ref|ZP_01067964.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6] gi|85840002|gb|EAQ57261.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6] Length = 602 Score = 219 bits (558), Expect = 8e-55, Method: Composition-based stats. Identities = 72/444 (16%), Positives = 150/444 (33%), Gaps = 40/444 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y I + RD +L L T + G+ WL G + + ++ + Sbjct: 194 LKEYLTIIEEAKKRDHRKLGTELKLFT-FDDEIGGGLPIWLSNGARLRSKLEHMLYKIHR 252 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P L AD W SG Y +Y + M +++ P + I++S + Sbjct: 253 LRGYEPVRGPELLKADAWKISGHYANYKENM-YFTQIDEQEYGIKPMNCVGHIKIYQSDV 311 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP F++ + R E G+ R REF DA+ F + P K ++ Sbjct: 312 RSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCM-PSQIKEQVLEILAFV 370 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + T + + + + D+ Sbjct: 371 DNLMKLFDFSYEMEI------------------STKPEKAIGDDEIWEIATKALKEALDE 412 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ K+ D+L + ++ F +++ Sbjct: 413 QGLKYGIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVD----FNLPSRF----KLE 461 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +D + + +G+ ++ + + + I + Sbjct: 462 YTDSDNEKKQPVMLHRAILGSFERFIGILTEHC------AGEFPFFIAPTAVGIVPIGEA 515 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ++I L ++ D + E + + A+ P+ +++G V+ V ++ Sbjct: 516 HIAYAKEIQKELLELNIDSEVYEKNESLSKKIRTAEKQKLPMILVLGDDEVAKRSVALRD 575 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R ++++SL+E I + S Sbjct: 576 RRAKEQKNLSLDEFIKLVKEKMSE 599 >gi|218200880|gb|EEC83307.1| hypothetical protein OsI_28676 [Oryza sativa Indica Group] Length = 716 Score = 219 bits (558), Expect = 8e-55, Method: Composition-based stats. Identities = 71/446 (15%), Positives = 141/446 (31%), Gaps = 67/446 (15%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R +Y + + RD + L HQ S G +LP G + + +R++ Sbjct: 337 RLKEYKHLLEEAKKRDHRLLGQTQDLF--FFHQLSPGSCFFLPHGAIIYNKLMDFLRQQY 394 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G E+ P + + LW SG +Y + M + + + P + +F Sbjct: 395 RDRGYQEVLSPNIYNMQLWETSGHAANYKENMF-VFEIEKQEFGLKPMNCPGHCLMFEHR 453 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP + R+EL G+ R R F DA+ F K + Sbjct: 454 VRSYRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCR-ESQIKDEVKAVLDF 512 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++ G K + + P E + + Sbjct: 513 INYVYEIFGFKY-ELELSTRPEKYLGDIE-----------------TWNKAEQQLTEALN 554 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + I E A Y D+ +FD+L + + +G + Sbjct: 555 EFGKPWQINEGDGAFYGPKIDIG---VFDALKRKFQCATLQAILGSV------------- 598 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 R+ A ++E + + + + Sbjct: 599 ---------------------ERMFAILLEHYNGKWPLWLSPR-------QAIVCSISSN 630 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + +++ AR+ + G V D+ I + A L F ++VG++ +V ++ Sbjct: 631 SVEYAKQVRARIHEAGFHVAIDETDRTIQKKVREAQLAQFNYILVVGAQEAETGQVSVRV 690 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R +S++++I + + Sbjct: 691 RDKAELATVSIDDIITRFKEEVAAYK 716 >gi|327334245|gb|EGE75959.1| proline--tRNA ligase [Propionibacterium acnes HL097PA1] Length = 581 Score = 219 bits (558), Expect = 8e-55, Method: Composition-based stats. Identities = 106/271 (39%), Positives = 154/271 (56%), Gaps = 6/271 (2%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+ F+ L+E+P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 1 MSQLFVRTLREDPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEMA 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 61 SIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDLY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y+ Sbjct: 121 SSYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYI 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RIF+RLG ++A SGP+GG S EF+ +A GE S + + D Sbjct: 181 RIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGEDTFVRSSGGYAANVEAVRMAVPDP 240 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + + P A D + + +SL Sbjct: 241 LPI------VGLPEAEVVDTPDARTIESLVR 265 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 4/188 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 DV + D P+ + ARGIE+GHIF G KY+ + +GK V MG Sbjct: 395 GVIDVAEIREGDPAPDGSGELHLARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R VAA+ E + D KG+ WP VAP+ + ++ ++ + +I + L++ Sbjct: 455 SYGLGVSRAVAAIAEGTCDEKGLCWPREVAPYDVQVLATGKGTEILDE-ATRIASELAEA 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD G +FA +++LG P V+VG + + D VE++ R TG +S+ E + Sbjct: 514 GLEVLLDDRKASPGVKFADSEILGMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAV 572 Query: 436 NYASHRFS 443 Sbjct: 573 CAVLKEVR 580 >gi|297202727|ref|ZP_06920124.1| prolyl-tRNA synthetase [Streptomyces sviceus ATCC 29083] gi|197713306|gb|EDY57340.1| prolyl-tRNA synthetase [Streptomyces sviceus ATCC 29083] Length = 567 Score = 219 bits (557), Expect = 8e-55, Method: Composition-based stats. Identities = 102/239 (42%), Positives = 144/239 (60%), Gaps = 1/239 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ L+++P DAE+ SHKL++R G + + + GI+SWLPLG+K L NV I+REE Sbjct: 8 RMSQLMAKTLRDDPADAEVLSHKLLVRAGYVRRTAAGIWSWLPLGKKVLANVERIVREEM 67 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P + + + +GR+D YG E+ RL DR + GPTHEE+ T + + Sbjct: 68 DAIGAQEVLLPAILPREPYEATGRWDEYGPELFRLQDRKGGDYLLGPTHEEIFTLLVKDQ 127 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REFLMKD+YSFD EG SY +Y Sbjct: 128 ASSYKDLPVILYQIQHKYRDEARPRAGILRGREFLMKDSYSFDTEDEGLARSYALHRQAY 187 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++F RLGL A +G +GG S EF+ A+ GE F DF +E ++ Sbjct: 188 QKVFERLGLDYRICAATAGAMGGSKSEEFLAPAEAGE-DTFADCPNCDFAANTEAITYE 245 Score = 136 bits (343), Expect = 6e-30, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 6/177 (3%) Query: 266 KLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 + D P+ R IE+GHIF G KY+ + G +GK V MGSYGIG R Sbjct: 393 QEGDPCPKCGTGLKLDRAIEIGHIFQLGRKYADALKLDVLGQNGKPVRVTMGSYGIGVSR 452 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 VAA+ E + D KG+ WP VAP + + A + + + +L + G V DD Sbjct: 453 AVAALAEQTADDKGLCWPAEVAPADVH--VVAAGKALQIELALDVSEKLREAGLRVLVDD 510 Query: 384 M-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 G G +F ++L+G P ++ G + +E+K R TG RE+++++E I + Sbjct: 511 RAGVSPGVKFTDSELIGVPKILVAGRRSAE-GVLELKDRRTGEREELTVDEAIARLT 566 >gi|256376220|ref|YP_003099880.1| threonyl-tRNA synthetase [Actinosynnema mirum DSM 43827] gi|255920523|gb|ACU36034.1| threonyl-tRNA synthetase [Actinosynnema mirum DSM 43827] Length = 682 Score = 219 bits (557), Expect = 8e-55, Method: Composition-based stats. Identities = 69/448 (15%), Positives = 131/448 (29%), Gaps = 49/448 (10%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + G+ + P G + R G + Sbjct: 259 EAERRDHRKLGVELDLFS-FPDEIGSGLAVFHPRGGIIRKAMEDYSRARHEAEGYEFVYS 317 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDIFR 119 P + +L+ SG D Y M R + P + IFR Sbjct: 318 PHITKGNLFETSGHLDWYRDGMYPAMHLDAELNEDGTIRRPGQDYYLKPMNCPFHDLIFR 377 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 S +SYR LP ++ +R E G+ R R DA+ F + + + Sbjct: 378 SRGRSYRELPLRMFEFGSVYRYEKSGVIHGLTRVRGMTQDDAHIFCTLDQVQEEL-KSLL 436 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L + GL + + + + S + + + Sbjct: 437 AFVLGLLRDYGLDDFYLELSTR----------------NDEKYVGSDELWETATETLRVA 480 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 +D A Y + + D+L ++S ++ F ++ Sbjct: 481 AEDSGLELVPDPGGAAFYGPKI---SVQAKDALGRTWQMSTIQLD----FNLPERF---- 529 Query: 299 SATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + G DG + G++ V+ + +P +AP ++ I I Sbjct: 530 ELEYTGPDGSRQRPVMIHRALFGSIERFFGVLT---EHYAGAFPAWLAPVQVVGIPIADE 586 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + L K G V D +++ + P ++ G K V V Sbjct: 587 HADHL---FAVAKELKKHGVRVEIDASDDRMQKKIRNHTTQKVPFMLLAGGKDVESGAVS 643 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 + R + +E+ + S Sbjct: 644 FRFRDGTQINGVPVEQAVATVVGWISRR 671 >gi|314936576|ref|ZP_07843923.1| proline--tRNA ligase [Staphylococcus hominis subsp. hominis C80] gi|313655195|gb|EFS18940.1| proline--tRNA ligase [Staphylococcus hominis subsp. hominis C80] Length = 566 Score = 219 bits (557), Expect = 8e-55, Method: Composition-based stats. Identities = 113/237 (47%), Positives = 163/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P ++E P +AE SH+L+L+ G+I Q + GIYS+LPL + L++++ IIREE Sbjct: 1 MKQSKVFIPTMREVPSEAEALSHQLLLKAGLIKQSTSGIYSYLPLATRVLNHISRIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T I R Sbjct: 61 MENIDAVEILMPALQQAELWEESGRWGAYGPELMRLKDRNGREFALGPTHEEVVTSIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y +M+ + Sbjct: 121 ELKSYKQLPLTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQEMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R+G+ + P+ A+SG IGG +HEF+ L++ GE + S++ D+ E Sbjct: 181 YSRIFKRVGINARPVVADSGAIGGHHTHEFMALSEIGEDTIVYSEN-SDYAANIEKA 236 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 67/173 (38%), Positives = 99/173 (57%), Gaps = 2/173 (1%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 A GIEVG +F GTKYS M+A F GK + MG YGIG R ++A++E Sbjct: 395 GSGNAKFAEGIEVGQVFKLGTKYSEAMNAKFLDNQGKAQPLIMGCYGIGVSRTLSAIVEQ 454 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 ++D GIIWP SV PF + LI I + + +K+Y+ L DV +DD E+ G + Sbjct: 455 NNDENGIIWPKSVTPFDLHLITINPKKEEQLELGDKLYSELQSK-YDVLYDDRKERAGVK 513 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 F ADL+G P++++VG K S+ VE+K R TG E++ + E+ N+ + + Sbjct: 514 FNDADLIGLPIRIVVG-KNASEGIVEVKVRQTGESEEVHINELDNHIASLYEK 565 >gi|149200279|ref|ZP_01877300.1| threonyl-tRNA synthetase [Lentisphaera araneosa HTCC2155] gi|149136643|gb|EDM25075.1| threonyl-tRNA synthetase [Lentisphaera araneosa HTCC2155] Length = 603 Score = 219 bits (557), Expect = 8e-55, Method: Composition-based stats. Identities = 71/438 (16%), Positives = 143/438 (32%), Gaps = 39/438 (8%) Query: 17 DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS 76 D + +L + + KG+ W+P G D + RE + + G +S P + S Sbjct: 187 DHKKLGKELDIFH-FDEKVGKGLALWMPNGTIIRDEIEKYAREMEMKYGYQRVSTPHIAS 245 Query: 77 ADLWVESGRYDSYGKEMLRLADRNDKA-------MIYGPTHEEVMTDIFRSHIKSYRNLP 129 L+ SG Y M + N+ + I+ + +SY+ LP Sbjct: 246 EKLFQTSGHLPYYADSMFPPMELNEGDDAENSEKYYLKAMNCPYHHLIYSARPRSYKELP 305 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 + + +R E G++R R M DA+ + LT + + + M Y+ + Sbjct: 306 YRLCEYGTCYRYEKSGELSGLLRVRCMTMNDAHVY-LTEDQFEEEFRSMVKMYMEFYETF 364 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 R D S +F D D++ + Sbjct: 365 KFSDYSFRLS----VRDDSDKF-----------VGDPAVWDQAEALLAKVMDELGLEYFV 409 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 E A Y DV + L + +S ++ F + + + +D Sbjct: 410 GEGEAAFYGPKIDVQFKNLM---GREETLSTIQVD------FQSACKEKFALKYVDSDNT 460 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + + + I + G +P AP ++ ++ + C + I Sbjct: 461 EKEPIIIHRA--PLSTHERFISFIMEYYGGAFPAWCAPVQVCILPV---QDSCMEFTNSI 515 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 L++ V DD + P+ +I+G + V+D+ V ++ + + Sbjct: 516 ANELTRDLYRVEIDDSNNTFNKKIRTNTKRKIPILLIIGEQEVADNTVTVRRYGSRDQIT 575 Query: 429 MSLEEVINYASHRFSNNR 446 +S +E + + Sbjct: 576 VSRDEFVAIFKAEVKERK 593 >gi|302542146|ref|ZP_07294488.1| proline-tRNA ligase [Streptomyces hygroscopicus ATCC 53653] gi|302459764|gb|EFL22857.1| proline-tRNA ligase [Streptomyces himastatinicus ATCC 53653] Length = 569 Score = 219 bits (557), Expect = 8e-55, Method: Composition-based stats. Identities = 112/268 (41%), Positives = 150/268 (55%), Gaps = 2/268 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S L L+E+P DAE ASHKL++R G + + S GI++WLP+G+K L+NV+ I+REE Sbjct: 9 RMSTLMLKTLREDPADAETASHKLLVRAGYVRRASAGIWTWLPVGKKVLENVSRIVREEM 68 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + SGR++ YG + RL DR + GPTHEE+ T + Sbjct: 69 DAIGAQEVLLPALLPKEPYEASGRWEEYGDLLFRLKDRKGGDYLLGPTHEEIFTQTVKDQ 128 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR GV+R REF MKD+YSFD + EG SY +Y Sbjct: 129 CTSYKDLPVMLYQIQTKYRDEARPRSGVLRGREFQMKDSYSFDTSDEGLAESYRLHREAY 188 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGET-QVFCSKDFMDFPIPSENTDFD 240 RIF RLGL + A SG +GG S EF+ A GE V C + T Sbjct: 189 QRIFERLGLDYRIVSAVSGAMGGSASEEFLAPAAAGEDTFVDCPNCDYAANTEAVTTAVP 248 Query: 241 DIISLNS-IVEQWTAPYAATSDVHNEKL 267 + VE+ P T + E L Sbjct: 249 AVEGAEHGPVEELDTPDTPTIETLAEHL 276 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 61/175 (34%), Positives = 88/175 (50%), Gaps = 6/175 (3%) Query: 269 DSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+ R IE+GHIF G KY+ G +GK V MGSYGIG RVVA Sbjct: 398 DPCPQCGTGIALDRAIEIGHIFQLGRKYADTFQLDVLGQNGKPVRVTMGSYGIGVSRVVA 457 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-G 385 A+ E + D G+ WP VAP + + A + + + +L G V DD G Sbjct: 458 ALAEQTFDDSGLCWPREVAPADVH--IVAAGKALQTELALDLAEKLGTAGVRVMVDDRAG 515 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G +F A+L+G P ++VG + D VE+K R TG RE++ ++E ++ + Sbjct: 516 VSPGVKFTDAELIGVPTILVVG-RGAKDGVVELKDRRTGDREELPIDEALSRLTS 569 >gi|302063985|ref|ZP_07255526.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40] Length = 590 Score = 219 bits (557), Expect = 9e-55, Method: Composition-based stats. Identities = 74/398 (18%), Positives = 129/398 (32%), Gaps = 40/398 (10%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ W P G + +R+ Q G Sbjct: 231 YIQRIEEAEKRDHRKIGKRLGLF--HTQEEAPGMVFWHPQGWTLYQVLEQYMRKVQRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E+ P + LW +SG + +Y M + P + +F +KSY Sbjct: 289 YLEIKTPQVVDRSLWEKSGHWANYADNMFT-TQSESRDYAIKPMNCPCHVQVFNQGLKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+E G+MR R F DA+ F + S L + Sbjct: 348 RELPLRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAES-AAFIKLTLDV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K I ++ + P S E D + + D Sbjct: 407 YADFGFKDIELKLSTRPEKRVGSDE-----------------LWDRAESALASALDSAGL 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D L + ++ F + S A + Sbjct: 450 PYDLQPGEGAFYGPKIEF---SLKDCLGRVWQCGTLQLD----FNLPIRLS----AEYVS 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + +G+ ++ ++ +P +AP + ++NI D Sbjct: 499 EDNSRKNPVMLHRAILGSFERFIGILIEHYE---GAFPAWLAPTQAVIMNITDK---QAD 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 ++ L++ G D E+IG + LL P Sbjct: 553 FALEVEKTLAESGFRAKSDLRNEKIGFKIREHTLLKVP 590 >gi|320528406|ref|ZP_08029568.1| threonyl-tRNA synthetase [Solobacterium moorei F0204] gi|320131320|gb|EFW23888.1| threonyl-tRNA synthetase [Solobacterium moorei F0204] Length = 591 Score = 219 bits (557), Expect = 9e-55, Method: Composition-based stats. Identities = 78/438 (17%), Positives = 149/438 (34%), Gaps = 32/438 (7%) Query: 11 LQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 L++ RD + + G+ WLP G ++ I ++ G + Sbjct: 176 LEDAKQRDHRKLGKDMQIFM-FSDIVGGGLPLWLPNGLTVRRLLSDYIMNKELARGYQHV 234 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P++ S L+ SG Y +M + R+D + P + I++S + SYR+LP Sbjct: 235 LTPSVASTKLYKISGHLAHYKDDMFPIMSRDDDEFVLRPMNCPEHMIIYKSQLHSYRDLP 294 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 +I FR E G+ RSR F D++ F + + + L ++ Sbjct: 295 IRIAEIANDFRFEASGALTGIERSRAFTQNDSHIFCTEEQIASE-IKAVTELILDVYKDF 353 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 L R + F + D + ++ Sbjct: 354 NLNQFEFRLSLRDKENTE-------------KYFGNDDLWERSESELREVLKEMNVPYYE 400 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 E A Y DV ++ +L + +S ++ ++ L A K Sbjct: 401 AEGEAAFYGPKIDV---QVRSALGHDVTLSTIQLDY----QLPERFELEYVA---NGGEK 450 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 V + +G++ A + G +W I + + + +K+ Sbjct: 451 KRPVVIHRAILGSIDRFVAFLLEETKGILPLWLAPRQAVVIPVSP-----EAHGEYAKKV 505 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 L K+G DD E++G + A P++V+VG + ++ + ++ + Sbjct: 506 VEELRKIGVRTELDDRNEKLGYRIREAQTNKLPIEVVVGDGEIENNGITLRRYGSRQETK 565 Query: 429 MSLEEVINYASHRFSNNR 446 MSLEE + R Sbjct: 566 MSLEEFLAAIKVEIDEKR 583 >gi|317125011|ref|YP_004099123.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Intrasporangium calvum DSM 43043] gi|315589099|gb|ADU48396.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Intrasporangium calvum DSM 43043] Length = 664 Score = 219 bits (557), Expect = 9e-55, Method: Composition-based stats. Identities = 69/447 (15%), Positives = 135/447 (30%), Gaps = 33/447 (7%) Query: 5 KYFLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L L + RD +L L + + G+ + P G + +R Sbjct: 248 KAYLDRLAEAERRDHRRLGAELDLFS-FPDELGSGLPVFHPKGGVIKREMEDYVRRRHIE 306 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + L+ SG Y M + + + I++S + Sbjct: 307 EGFDYVGTPHITKDGLFHTSGHLPYYADTMFPPMELEGAKYQLKAMNCPMHNLIYQSRGR 366 Query: 124 SYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP F++ +R E G+ R R D++S+ + + L Sbjct: 367 SYRELPLRFFEFGSVYRYEKSGVVHGLTRVRGMTQDDSHSYVTPEQAPAE-IKHLLDFVL 425 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + GL + + G+ S +FI + + Sbjct: 426 SLLRDFGLDDFYLELSTRDTEGEKSAKFIGSDEQ-----------WEVATKVLEDVATAS 474 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + + D++ ++S + FG + Sbjct: 475 GLELVADPGGAAFYGPKI---SVQARDAIGRTWQMSTIQYDFNQPERFG--------LEY 523 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + ADG + S G++ V+ + G +W V + + Sbjct: 524 QAADGTRQQPVMIHSAKFGSIERFLGVLVEHYAGAFPVWLSPVQVLGVPVA------DEY 577 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D + RL + G V D ++ + A P +I G + V + R Sbjct: 578 ADYLGGVLDRLRRKGVRVELDASDDRFPKKIRNASKAKVPFVLIAGEDDRAADAVSFRFR 637 Query: 422 LTGIREDMSLEEVINYASHRFSNNRPV 448 + + +++ I ++ V Sbjct: 638 DGSQKNGVPIDDAIAEVLAAIASRAQV 664 >gi|300743963|ref|ZP_07072983.1| proline--tRNA ligase [Rothia dentocariosa M567] gi|300380324|gb|EFJ76887.1| proline--tRNA ligase [Rothia dentocariosa M567] Length = 605 Score = 219 bits (557), Expect = 9e-55, Method: Composition-based stats. Identities = 100/239 (41%), Positives = 141/239 (58%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S F+ L+E+P DAE+ASHKL++R G I + + G+Y+WLPLG K L V I+REE Sbjct: 4 RLSNLFVRTLREDPVDAEVASHKLLVRAGYIRRAAPGVYTWLPLGLKVLRKVENIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+ P L + + + R++ YG + RL DR M+ PTHEE+ T + + Sbjct: 64 NAIGAQEVLFPALLPREPYEATNRWEEYGDNLFRLQDRKGADMLLAPTHEEMFTLLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSF + EG +Y +Y Sbjct: 124 YSSYKDLPLYIYQIQNKYRDEARPRAGLLRGREFVMKDSYSFTVDDEGLNEAYEAHRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 RIF+RLGL ++ + A+SG +GG S EF+ GE S + + T Sbjct: 184 QRIFNRLGLDTVIVTAQSGAMGGSRSEEFLHPTPVGEDTFVRSAGGYAANVEAVTTVVP 242 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 62/190 (32%), Positives = 95/190 (50%), Gaps = 5/190 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ ++ARGIE+GHIF G KY+ + +GK V MG Sbjct: 418 GTLEACEVREGDPAPDGSGPLIAARGIEMGHIFQLGRKYAEALGLKVLDQNGKLQTVTMG 477 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R +AA+ E +HD KG+IWP ++AP + I I D + E + A L Sbjct: 478 SYGIGVTRALAAIAEGNHDEKGLIWPRNLAPADVH-IVITNKDAQSHEYAETLSAELEGA 536 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G V DD G +F A+LLG P +++G + D +E+K R +G D+++ + Sbjct: 537 GVQVLLDDRLKTSPGVKFGDAELLGVPTILVIG-RGFKDGTLELKDRRSGEARDIAVSDA 595 Query: 435 INYASHRFSN 444 + + Sbjct: 596 VREILAEIRS 605 >gi|311113213|ref|YP_003984435.1| proline--tRNA ligase [Rothia dentocariosa ATCC 17931] gi|310944707|gb|ADP41001.1| proline--tRNA ligase [Rothia dentocariosa ATCC 17931] Length = 605 Score = 219 bits (557), Expect = 9e-55, Method: Composition-based stats. Identities = 100/239 (41%), Positives = 141/239 (58%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S F+ L+E+P DAE+ASHKL++R G I + + G+Y+WLPLG K L V I+REE Sbjct: 4 RLSNLFVRTLREDPVDAEVASHKLLVRAGYIRRAAPGVYTWLPLGLKVLRKVENIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+ P L + + + R++ YG + RL DR M+ PTHEE+ T + + Sbjct: 64 NAIGAQEVLFPALLPREPYEATNRWEEYGDNLFRLQDRKGADMLLAPTHEEMFTLLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSF + EG +Y +Y Sbjct: 124 YSSYKDLPLYIYQIQNKYRDEARPRAGLLRGREFVMKDSYSFTVDDEGLNEAYEAHRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 RIF+RLGL ++ + A+SG +GG S EF+ GE S + + T Sbjct: 184 QRIFNRLGLDTVIVTAQSGAMGGSRSEEFLHPTPVGEDTFVRSAGGYAANVEAVTTVVP 242 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 62/190 (32%), Positives = 94/190 (49%), Gaps = 5/190 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ ++ARGIE+GHIF G KY+ + +GK V MG Sbjct: 418 GTLEACEVREGDPAPDGSGPLIAARGIEMGHIFQLGRKYAEALGLKVLDQNGKLQTVTMG 477 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R +AA+ E +HD KG+IWP ++AP + I I D + E + A L Sbjct: 478 SYGIGVTRALAAIAEGNHDEKGLIWPRNLAPADVH-IVITNKDAQSHEYAETLSAELEGA 536 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G V DD G +F A+LLG P +++G + D +E+K R G D+++ + Sbjct: 537 GVQVLLDDRLKTSPGVKFGDAELLGVPTILVIG-RGFKDGTLELKDRRNGEARDIAVSDA 595 Query: 435 INYASHRFSN 444 + + Sbjct: 596 VREILAEIRS 605 >gi|86160363|ref|YP_467148.1| prolyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C] gi|114152165|sp|Q2IGK6|SYP1_ANADE RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA ligase 1; Short=ProRS 1 gi|85776874|gb|ABC83711.1| prolyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C] Length = 575 Score = 219 bits (557), Expect = 9e-55, Method: Composition-based stats. Identities = 119/393 (30%), Positives = 177/393 (45%), Gaps = 7/393 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R ++ F+P L+E P DA++ASHKL++R G I Q GIY +LPL +++L + AI+REE Sbjct: 5 RYTQAFIPTLKEAPADAQVASHKLLVRAGFIRQLGAGIYDYLPLAKRSLTKIEAIVREEM 64 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E +P L A++W ESGR++ G M RL DR G THEE+ T I R Sbjct: 65 NAIGGQEFFLPALHPAEIWKESGRWEVMGDNMFRLKDRKGGDYGLGMTHEEIFTAIARDE 124 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 ++SYR LP +YQIQ KFRDE RP+ G++R R+F MKDAYSFD+ G SY +Y Sbjct: 125 LRSYRQLPQVWYQIQTKFRDEPRPKSGLLRVRQFTMKDAYSFDVDRAGLDKSYEDQRQAY 184 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF---MDFPIPSENTD 238 +IF R GL + ++A SG +GG S EF+V D GE V + + Sbjct: 185 EKIFTRCGLDFVAVQAHSGSMGGSESSEFMVRTDAGEDLVAACPRCRYAANTETATSRVA 244 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSL 296 + + E++ P T + E+ S+P + + + Sbjct: 245 AEADGPGLAAPEKFPTPGVVTIEA-LEQAPHSVPARRQLKTLVYMADERPVIAVVRGDQE 303 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A + A G + I + A + + + A Sbjct: 304 LNEAKLQTATGAQVVRPAHAEEIPPLMGAHAGSLGAVRFTRARVVVDPSLADRKDMVTGA 363 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 ++ + L G + + G Sbjct: 364 NEDGFHLRGVDVRRDLLAHGA-TLAELRTVKAG 395 Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats. Identities = 74/192 (38%), Positives = 104/192 (54%), Gaps = 3/192 (1%) Query: 254 APYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A A +++ K + P + +EVGHIF GTKYS M AT A GK Sbjct: 381 AHGATLAELRTVKAGEGCPRCDGALEVFKALEVGHIFKLGTKYSESMKATVLDAGGKQVP 440 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + MGSYGIG R++AA IE HD GI++P ++APF +++ + + R A E++ A Sbjct: 441 IVMGSYGIGVERILAAAIELHHDDNGIVFPMAIAPFHATVLTLGP-EPELRKAAEEVVAA 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L K G +V +DD E+ G +F ADLLG P++V VG K ++ VE K R G E + L Sbjct: 500 LGKEGVEVLFDDRDERAGVKFKDADLLGIPIRVAVGKKGLAAGNVEWKLRRGGAVELVPL 559 Query: 432 EEVINYASHRFS 443 EV A+ Sbjct: 560 GEVARKAAEAVR 571 >gi|203284615|ref|YP_002222355.1| threonyl-tRNA synthetase [Borrelia duttonii Ly] gi|238690570|sp|B5RMR3|SYT_BORDL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|201084058|gb|ACH93649.1| threonyl-tRNA synthetase [Borrelia duttonii Ly] Length = 583 Score = 219 bits (557), Expect = 9e-55, Method: Composition-based stats. Identities = 74/448 (16%), Positives = 158/448 (35%), Gaps = 39/448 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L + +E RD +L L + + G+ + P G + + REE + Sbjct: 172 KAYLKLQEEIKKRDHRKLGRELNLFSVH-DEIGPGLIFFHPHGARIRALIENFWREEHFK 230 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + LW SG D Y + M + + P + I+ + Sbjct: 231 NGYDILFTPHIGKSWLWETSGHLDFYKESMFEKIEMDRSDYYVKPMNCPFHIAIYNTDKH 290 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LPF + ++ +R E G MR R F DA+ + + ++ + Sbjct: 291 SYRDLPFRWAELGTVYRYEKIGAIHGTMRVRGFTQDDAHIICTYEQVNFE-VREVLRFAI 349 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++++ G ++ + P + D + D Sbjct: 350 DMWNKFGFTNLKAYLSTKP-----------------EKAVGDDDDWQMAVKVLEKALIDF 392 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I E A Y D+ K+ DSL ++S + F ++ + +A Sbjct: 393 NIDFDIDEGGGAFYGPKIDL---KIIDSLGRAWQMSTIQFD----FNLPVRFKMTYTAE- 444 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ ++ + G +W + I + + Sbjct: 445 --DGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPVW------LAPLQVVIIPVNSIVE 496 Query: 363 DACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + ++ +R G + +D+ ++ ++ P I+G + V + K+ I+ R Sbjct: 497 EYALEVLSRFQNEGIRIKFDNYCNMRMNAKIRQYQSKKVPYMFIIGEREVVEGKISIRTR 556 Query: 422 LTGIREDMSLEEVINYASHRFSNNRPVL 449 + L+E + + + SN + +L Sbjct: 557 TNEQINGLELKEALEFVKLKISN-KEIL 583 >gi|119963667|ref|YP_947320.1| prolyl-tRNA synthetase [Arthrobacter aurescens TC1] gi|152074745|sp|A1R508|SYP_ARTAT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|119950526|gb|ABM09437.1| prolyl-tRNA synthetase [Arthrobacter aurescens TC1] Length = 603 Score = 219 bits (557), Expect = 9e-55, Method: Composition-based stats. Identities = 108/272 (39%), Positives = 153/272 (56%), Gaps = 6/272 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+E+P DAE+ SHKL++R G I + + GIY+WLPLG L V IIR+E Sbjct: 4 RLSQLFLRTLREDPVDAEVDSHKLLVRAGYIRRAAPGIYTWLPLGLSVLRKVEDIIRQEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ P L + + + R+ YG+ + RL DR + PTHEE+ T + + Sbjct: 64 SAIGAQEVHFPALLPREPYEATNRWTEYGEGLFRLQDRKGADYLLAPTHEEMFTLLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP + YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G SY +Y Sbjct: 124 YSSYKDLPLSLYQIQNKYRDEARPRAGLLRGREFIMKDSYSFDIDDAGLDASYAAHRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L+IF RLGL+ IP+ A +G +GG S EF+ + GE S + + T D Sbjct: 184 LKIFERLGLEVIPVAATAGAMGGSKSEEFLFPTEIGEDTFVRSAGGYYANVEAVTTVVPD 243 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 ++ AP A D N D+L + Sbjct: 244 ------EIDFSNAPAAEVLDTPNTPTIDTLVD 269 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 64/191 (33%), Positives = 103/191 (53%), Gaps = 5/191 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 + + D P+ +ARGIE+GHIF G KY+ + +GK V MG Sbjct: 415 GVIESTEVRAGDPAPDGSGPLETARGIEMGHIFQLGRKYAEALDLKVLDQNGKQQVVTMG 474 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R VAA+ E+++D +G++WP SVAP + ++ + D+ +A EK+ L Sbjct: 475 SYGVGVTRAVAALAEANNDDRGLVWPRSVAPADVHVVAVGRGDE-IFEAAEKLSLELEAA 533 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV +DD G +F A+L+G P + VG + + D VEIK R +G E++S+++ Sbjct: 534 GLDVIFDDRPKVSPGVKFGDAELVGVPTILAVG-RGLVDGVVEIKDRRSGEAENISVDKA 592 Query: 435 INYASHRFSNN 445 ++Y + Sbjct: 593 VDYVVNAVRTR 603 >gi|228474993|ref|ZP_04059721.1| proline--tRNA ligase [Staphylococcus hominis SK119] gi|228270978|gb|EEK12366.1| proline--tRNA ligase [Staphylococcus hominis SK119] Length = 566 Score = 219 bits (557), Expect = 9e-55, Method: Composition-based stats. Identities = 113/237 (47%), Positives = 163/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P ++E P +AE SH+L+L+ G+I Q + GIYS+LPL + L++++ IIREE Sbjct: 1 MKQSKVFIPTMREVPSEAEALSHQLLLKAGLIKQSTSGIYSYLPLATRVLNHISRIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+E+ +P LQ A+LW ESGR+ +YG E++RL DRN + GPTHEEV+T I R Sbjct: 61 MENIDAVEILMPALQQAELWEESGRWGAYGPELMRLKDRNGREFALGPTHEEVVTSIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y +M+ + Sbjct: 121 ELKSYKQLPLTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQEMYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R+G+ + P+ A+SG IGG +HEF+ L++ GE + S++ D+ E Sbjct: 181 YSRIFKRVGINARPVVADSGAIGGHHTHEFMALSEIGEDTIVYSEN-SDYAANIEKA 236 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 67/173 (38%), Positives = 99/173 (57%), Gaps = 2/173 (1%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 A GIEVG +F GTKYS M+A F GK + MG YGIG R ++A++E Sbjct: 395 GSGNAKFAEGIEVGQVFKLGTKYSEAMNAKFIDNQGKAQPLIMGCYGIGVSRTLSAIVEQ 454 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 ++D GIIWP SV PF + LI I + + +K+Y+ L DV +DD E+ G + Sbjct: 455 NNDENGIIWPKSVTPFDLHLITINPKKEEQLELGDKLYSELQSK-YDVLYDDRKERAGVK 513 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 F ADL+G P++++VG K S+ VE+K R TG E++ + E+ N+ + + Sbjct: 514 FNDADLIGLPIRIVVG-KNASEGIVEVKVRQTGESEEVHINELDNHIASLYEK 565 >gi|116669968|ref|YP_830901.1| prolyl-tRNA synthetase [Arthrobacter sp. FB24] gi|152074746|sp|A0JUT1|SYP_ARTS2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116610077|gb|ABK02801.1| prolyl-tRNA synthetase [Arthrobacter sp. FB24] Length = 603 Score = 219 bits (557), Expect = 9e-55, Method: Composition-based stats. Identities = 109/276 (39%), Positives = 153/276 (55%), Gaps = 2/276 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R SK FL L+E+P DAE+ASH+L++R G I + + GIY+WLPLG L V +IREE Sbjct: 4 RLSKLFLRTLREDPADAEVASHRLLVRAGYIRRAAPGIYTWLPLGLSVLRKVEKVIREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA E+ P L + + + R+ YG+ + RL DR + PTHEE+ T + + Sbjct: 64 AAIGAQEVHFPALLPKEPYEATNRWTEYGEGIFRLKDRKGGDYLLAPTHEEMFTLLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP + YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G SYN +Y Sbjct: 124 YSSYKDLPLSIYQIQNKYRDEARPRAGLLRGREFIMKDSYSFDVDDAGLDASYNAHRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L+IF RLGL+ IP+ A +G +GG S EF+ + GE S + + T Sbjct: 184 LKIFERLGLEVIPVAATAGAMGGSRSEEFLHPTEIGEDTFVRSAGGYAANVEAVTTVVPA 243 Query: 242 II--SLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 I S E P T D + +P ++ Sbjct: 244 EIDFSNAPAAEIRDTPNTPTIDTLVDAANQLVPRDE 279 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 63/191 (32%), Positives = 102/191 (53%), Gaps = 5/191 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 + + D P+ +ARGIE+GHIF G KY+ + +GK V MG Sbjct: 415 GVIECTEVRAGDEAPDGSGPLETARGIEMGHIFQLGRKYAEALELKVLDQNGKQVVVTMG 474 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R VAA+ ES+HD KG++WP +VAP + ++ + + A E++ L Sbjct: 475 SYGVGVTRAVAALAESNHDAKGLVWPRAVAPADVHVVAVGRG-EEIFAAAEQLSLELEAA 533 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD G +F A+L+G P + VG + + D VEIK R +G E++++E+ Sbjct: 534 GLEVIYDDRPKVSPGVKFGDAELIGVPTILAVG-RGLVDGVVEIKDRRSGEAENVAVEKA 592 Query: 435 INYASHRFSNN 445 ++Y + + Sbjct: 593 VDYVVNAVRSK 603 >gi|307198619|gb|EFN79469.1| Probable prolyl-tRNA synthetase, mitochondrial [Harpegnathos saltator] Length = 434 Score = 219 bits (557), Expect = 1e-54, Method: Composition-based stats. Identities = 139/446 (31%), Positives = 218/446 (48%), Gaps = 46/446 (10%) Query: 2 RRSKYFLPI---LQENPRDAEIASH--KLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAI 56 R SK F P+ + N EI S KLM+ G+I S G+YS LPLG + L+ + I Sbjct: 11 RTSKIFQPLPSGIFANKDKTEILSKSYKLMINYGIIKSVSTGMYSILPLGMRVLNKLIKI 70 Query: 57 IREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTD 116 I +E GA ++ +P L SA LW +S RY+S E+ + DR+DK I PT+EE + D Sbjct: 71 IDKEMTDLGAEKIMLPALTSAKLWKKSNRYNSNKTELFTVTDRHDKEYILSPTYEEAICD 130 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 + + ++LP YQI K+RDE++PR G +RSREF+MKD Y+FD T ++ +YN Sbjct: 131 LVSATYLPEKSLPLRLYQISSKWRDEMKPRLGFIRSREFIMKDLYTFDTTLNKAQDTYNL 190 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + SY IF ++G+ + + G IGG SHE+ ++D GE + N Sbjct: 191 VCESYSNIFKQIGIDHMKAVGDVGTIGGLSSHEYHYISDIGEDVILWCSSC--------N 242 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR--GIEVGHIFYFGTKY 294 ++IIS + PE K R +E+GH F TKY Sbjct: 243 YTINEIISK----------------------ITTCPECKGELQRHNSVEIGHTFLLNTKY 280 Query: 295 SLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN- 353 S P++A + + K + MG YG+G R+ A ++E + WP +AP+ +I Sbjct: 281 SQPLNAMYI-ENNKLKPMIMGCYGLGVSRIFALIVEILSTNNEMRWPTKLAPYTACIIPP 339 Query: 354 -IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFV 411 + ++ E+++ L K D DD + IG + A +G+P +++G Sbjct: 340 KTGSKEEYISAYIEQLFEILQKRDIDTILDDRTQFTIGKRLVYARAIGYPYIIVIGK--A 397 Query: 412 SDSKV---EIKHRLTGIREDMSLEEV 434 + + EI + +SLE++ Sbjct: 398 ATQSIPLFEIHDINNSVSHKLSLEQI 423 >gi|261337772|ref|ZP_05965656.1| threonine--tRNA ligase [Bifidobacterium gallicum DSM 20093] gi|270277225|gb|EFA23079.1| threonine--tRNA ligase [Bifidobacterium gallicum DSM 20093] Length = 681 Score = 219 bits (557), Expect = 1e-54, Method: Composition-based stats. Identities = 62/454 (13%), Positives = 133/454 (29%), Gaps = 49/454 (10%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + + RD ++ L + + G+ + P G ++ + R+ R Sbjct: 247 RMEEAAKRDHRKLGQEMDLFS-FPDEIGPGLAVFHPKGAAIINAMEDYSRDMHRRHHYSF 305 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTD 116 + P + L+ SG Y M + P + + Sbjct: 306 VQTPHITKGKLYETSGHLQWYKDGMYPAMHLDEEKDAEGNIVKQGFDYYLKPMNCPMHNL 365 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 366 IFKSRQRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDSHIYCTREQMKDEL-K 424 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 + L++ GL + + E + S + + + Sbjct: 425 NLLQFVLKLLKDYGLNDFYLELST----------------KDEHKFVGSDEIWEEATNTL 468 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 D A Y + + D++ +VS ++ FG Sbjct: 469 AEVAKDSGLELVADPGGAAFYGPKI---SVQARDAIGRTWQVSTIQLDFNLPERFG---- 521 Query: 296 LPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + DG + G++ A++ + G W V + + Sbjct: 522 ----LEYIAKDGTHQRPVMIHRALFGSIERFFAILLEHYAGALPAWIAPVQALGVPVA-- 575 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 ++ L + V D ++ G + A P +IVG + +S++ Sbjct: 576 ----DEFAPHLQRFMDSLEEDLVRVEIDLSDDRFGKKIRNASKSKVPFILIVGEEDMSNN 631 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 V + R + +++ + + V Sbjct: 632 AVSFRFRDGSQLNGVPVDDARQWILKAINERVQV 665 >gi|169630222|ref|YP_001703871.1| prolyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977] gi|226701313|sp|B1MD96|SYP_MYCA9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|169242189|emb|CAM63217.1| Prolyl-tRNA synthetase ProS [Mycobacterium abscessus] Length = 580 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 98/250 (39%), Positives = 144/250 (57%), Gaps = 1/250 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ F+ L+++P DAE+ SHKL++R G + + G+YSWLPLG + L + I+REE Sbjct: 4 RLSELFVRTLRDDPADAEVPSHKLLIRAGYVRPVAPGVYSWLPLGLRVLRKIENIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ +P L + + R+ YG + RL DR D M+ GPTHEE+ + Sbjct: 64 NAIGGQEILLPALLPRAPYETTNRWTEYGDSLFRLKDRRDNDMMLGPTHEELFALTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQ+Q K+RDE RPR G++R REF+MKD+YSFD + +G K +Y+ +Y Sbjct: 124 YSSYKDFPVILYQVQTKYRDEARPRAGILRGREFVMKDSYSFDTSDDGLKAAYHAHRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGET-QVFCSKDFMDFPIPSENTDFD 240 RIF RLGL + + A SG +GG S EF+ + TGE V C + + + T Sbjct: 184 QRIFGRLGLDYVIVAATSGAMGGSASEEFLAESPTGEDTFVRCVESGYAANVEAVITPAP 243 Query: 241 DIISLNSIVE 250 + + E Sbjct: 244 PARPIEGLAE 253 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 63/187 (33%), Positives = 100/187 (53%), Gaps = 4/187 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ + VSARGIE+GHIF G KY+ + G +GK + G Sbjct: 395 GTIEAAEVRDGDPSPDGAGQLVSARGIEIGHIFQLGRKYTDAFTVDVLGENGKPVRLTQG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VA V E HD G+ WP +V+PF + + I D R E++ A L ++ Sbjct: 455 SYGIGVSRLVAVVAEQQHDELGLRWPSAVSPFDVH-VVIANKDDAARAGAEELAAELDRL 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD G +F A+LLG P V++G + +D +E+++R TG + +++ + + Sbjct: 514 GHEVLLDDRTASPGVKFKDAELLGVPWIVVIG-RGWADGTIELRNRFTGETQPIAVTDAV 572 Query: 436 NYASHRF 442 + Sbjct: 573 ASVTQAI 579 >gi|197124440|ref|YP_002136391.1| prolyl-tRNA synthetase [Anaeromyxobacter sp. K] gi|226731425|sp|B4UGI0|SYP_ANASK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|196174289|gb|ACG75262.1| prolyl-tRNA synthetase [Anaeromyxobacter sp. K] Length = 574 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 110/274 (40%), Positives = 153/274 (55%), Gaps = 4/274 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ F+P L+E P DA++ASHKL++R G I Q GIY +LPL +++L V AI+REE Sbjct: 5 RYSQAFIPTLKEAPADAQVASHKLLVRAGFIRQLGAGIYDYLPLAKRSLAKVEAIVREEM 64 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E +P L A++W ESGR+D G M RL DR G THEE+ T + R Sbjct: 65 DAIGGQEFYLPALHPAEIWKESGRWDVMGDNMFRLKDRKGGDYCLGMTHEEIFTAVARDE 124 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 ++SYR LP +YQIQ KFRDE RP+ G++R R+F MKDAYSFD+ G SY +Y Sbjct: 125 LRSYRQLPQVWYQIQTKFRDEPRPKSGLLRVRQFTMKDAYSFDVDRAGLDRSYEDQRRAY 184 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF---MDFPIPSENTD 238 +IF R GL + ++A SG +GG S EF+V + GE V + + Sbjct: 185 EKIFTRCGLDFVAVQAHSGSMGGSESSEFMVRTEAGEDLVAACPRCRYAANTETATSRVA 244 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 + E++ P T + E+ S+P Sbjct: 245 AEADGPGLGAPEKFATPGVVTIEA-LEQAPHSVP 277 Score = 152 bits (385), Expect = 8e-35, Method: Composition-based stats. Identities = 71/192 (36%), Positives = 105/192 (54%), Gaps = 3/192 (1%) Query: 254 APYAATSDVHNEKLFDSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A A +++ K + P + +E+GHIF GTKYS M AT A+GK Sbjct: 381 AHGATLAELRTVKAGEGCPRCDGTLDVFKALEIGHIFKLGTKYSESMKATVLDAEGKQVP 440 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + MGSYGIG R++AA IE HD GI++P ++APF +++ + + R A E++ A Sbjct: 441 IVMGSYGIGVERILAAAIELHHDDNGIVFPMAIAPFHATVLTLGP-EPELRKAAEEVVAA 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L K G +V +DD E+ G +F ADLLG P+++ VG K ++ VE K R G E + + Sbjct: 500 LGKEGVEVLFDDRDERAGVKFKDADLLGIPIRIAVGKKGLAAGNVEWKLRKGGAVELVPV 559 Query: 432 EEVINYASHRFS 443 EV A+ Sbjct: 560 GEVARKAAEAVR 571 >gi|320535781|ref|ZP_08035862.1| prolyl-tRNA synthetase [Treponema phagedenis F0421] gi|320147329|gb|EFW38864.1| prolyl-tRNA synthetase [Treponema phagedenis F0421] Length = 576 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 103/271 (38%), Positives = 152/271 (56%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F+P L+E P +A IASH+L+LR GMI + G++++LPLG ++ + IIREE Sbjct: 1 MKMSQMFMPTLREVPSEAVIASHQLLLRAGMIRKIGNGLFAYLPLGLRSFHKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G +E + +LW ESGR+D+ G E+LR+ +R ++ ++ PT EE T + R Sbjct: 61 LDAIGCLECKPSVVIPGELWQESGRWDAMGDELLRMKNRLNQDLVVSPTAEEAFTALLRF 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ P T YQI K+RDE+RPR+G+MR+REF M DAYSF T E Y + Sbjct: 121 ELSSYKQFPLTLYQINTKYRDEIRPRYGLMRAREFTMMDAYSFHTTQESLDEVYEHFSQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R GL IP+RA+SG +GG S EF+V ++ G+ + + Sbjct: 181 YRKIFARCGLSVIPVRADSGAMGGSGSEEFMVESEVGDDTLILCPKCGYAANVEKAACAP 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 D Q P + E+L D L Sbjct: 241 DAKINVQKTAQKPEPIDTPNVKTIEELTDFL 271 Score = 143 bits (361), Expect = 5e-32, Method: Composition-based stats. Identities = 64/188 (34%), Positives = 96/188 (51%), Gaps = 5/188 (2%) Query: 259 TSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 DV K D S +G E+GHIF G KY+ M+ TF +GK Y MG Sbjct: 387 VCDVRTVKAGDRCLHCGAPFYSKKGNELGHIFKLGFKYTKSMNMTFLDENGKQQYPTMGC 446 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R +A+VIE HD GI+WP +VAP+ ++ IK ++A + +Y L G Sbjct: 447 YGIGVDRTLASVIEEHHDEDGIVWPLTVAPYHAVIVPIKYEG-KMKEAADALYTELQTAG 505 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G +F DL+G P++++VG K + ++E K R + ++ +EV Sbjct: 506 VEVLLDDRHERPGVKFKDMDLIGIPIRLVVGEKNLP--QIECKLRTEKESKLIAQKEVCA 563 Query: 437 YASHRFSN 444 + Sbjct: 564 FVQKLVQE 571 >gi|147668995|ref|YP_001213813.1| prolyl-tRNA synthetase [Dehalococcoides sp. BAV1] gi|189083496|sp|A5FS84|SYP_DEHSB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|146269943|gb|ABQ16935.1| prolyl-tRNA synthetase [Dehalococcoides sp. BAV1] Length = 569 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 107/252 (42%), Positives = 160/252 (63%), Gaps = 1/252 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F +E P DAE SH+L+LR+GMI Q + G+YS++PL +++ + IIR+E Sbjct: 1 MRYSRLFGKTQREIPSDAETISHQLLLRSGMIAQLTAGVYSFMPLAWRSIQKIETIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ G E+++P LQ ++W +SGR +G+ + L DR D+ ++ GPTHEEV+TD+ Sbjct: 61 MNKAGCQELAMPVLQPVEIWQQSGREAPFGQTLFHLKDRKDRNLVLGPTHEEVITDLASR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +I+SYR+LP YQIQ KFRDE RPR G++R REF+MKD YSFD +PEG SY M + Sbjct: 121 YIQSYRDLPQRLYQIQAKFRDEPRPRGGLIRVREFIMKDMYSFDASPEGLDDSYQTMKQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y ++ R GL+S+ + A+SG IGG SHEF+++A++GE + + +E F Sbjct: 181 YESVYRRCGLESMVIDADSGAIGGKASHEFMIVAESGEDSIIYCPKCS-YAANAEKAVFK 239 Query: 241 DIISLNSIVEQW 252 ++ Sbjct: 240 KKTLSKETLKDL 251 Score = 156 bits (394), Expect = 8e-36, Method: Composition-based stats. Identities = 64/187 (34%), Positives = 97/187 (51%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ + P + S RG+EVGHIF GT S A F A+G H + MG Y Sbjct: 379 ADIALAAEGSACPFCDGTFASKRGVEVGHIFKLGTFLSERFGANFTDAEGVSHPIIMGCY 438 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G+G R++AA IE +HD KGIIWP +AP+++ + + + V R++ EKIY L Sbjct: 439 GMGVGRLLAAAIEQNHDEKGIIWPMPIAPYQVYICGLFLDNPVVRESAEKIYKELEAKSI 498 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 +V +DD G +F ADLLG PL++ + + + VE K R E + L+ ++ Sbjct: 499 EVLFDDRELTAGVKFNDADLLGIPLRLTISPRNLDKGGVEFKLRRNKESELVPLDSIVER 558 Query: 438 ASHRFSN 444 + Sbjct: 559 VIATIKS 565 >gi|157736342|ref|YP_001489025.1| threonyl-tRNA synthetase [Arcobacter butzleri RM4018] gi|157698196|gb|ABV66356.1| threonyl-tRNA synthetase [Arcobacter butzleri RM4018] Length = 602 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 71/443 (16%), Positives = 156/443 (35%), Gaps = 41/443 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + +L+E RD +L L T G+ WLP G + + ++ + G Sbjct: 197 YTRMLEEAKKRDHRKLGTELELFT-FNDDVGAGLPMWLPKGARLRSKLEHLLYKAHRIRG 255 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + A++W SG Y +Y + M +D+ P + IF++++ SY Sbjct: 256 YEPVRGPEILKAEMWKISGHYANYKENM-YFTTIDDQEYGIKPMNCVGHIQIFKNNLVSY 314 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 + LP ++ + R E+ G+ R REF D++ F + + + + Sbjct: 315 KELPKKLFEYGVVHRHEMSGAMHGLFRVREFTQDDSHIFCTQDQIKQVIFEVL------- 367 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 ++ D +E V T + F + D+ Sbjct: 368 ----------EFVDTLLKVFDFKYEIEV--STKPEKAIGDDIFWEKTTKGIMDALDENNI 415 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D++ + +++ F + + Sbjct: 416 SYGIDEGGGAFYGPKIDI---KILDAIGRKWQCGTVQVDMNLPSRF--------NVEYIN 464 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 G+ + +G+ ++ + + + + + Sbjct: 465 EKGEKEQPVMIHRAILGSFERFIGILTEHC------AGEFPFIIAPTQVILVPIADSHVE 518 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ L + D +M E + + +A+ P+ V++G + V + V +++R T Sbjct: 519 YAKELQKALLENDLDSEIYNMNESLNKRIRMAEKQRVPMIVVIGDEEVENKTVALRNRRT 578 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 + +MS E I+ + + +R Sbjct: 579 REQSNMSKNEFISMLNEIKNGSR 601 >gi|239928618|ref|ZP_04685571.1| prolyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672] gi|291436943|ref|ZP_06576333.1| prolyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672] gi|291339838|gb|EFE66794.1| prolyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672] Length = 567 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 104/239 (43%), Positives = 145/239 (60%), Gaps = 1/239 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ L+++P DAE+ SHKL++R G + + + GI++WLPLG+K L NV I+REE Sbjct: 8 RMSQLMAKTLRDDPADAEVLSHKLLVRAGYVRRTAAGIWTWLPLGKKVLANVERIVREEM 67 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + +GR+D YG E+ RL DR + GPTHEE+ T + + Sbjct: 68 DAIGAQEVLLPALLPREPYEATGRWDEYGPELFRLQDRKGGDYLLGPTHEEIFTLLVKDQ 127 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ KFRDE RPR G++R REFLMKD+YSFDL EG SY +Y Sbjct: 128 ASSYKDLPVILYQIQTKFRDEARPRAGILRGREFLMKDSYSFDLEDEGLARSYALHRQAY 187 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++F RLGL A +G +GG S EF+ A+ GE F DF +E ++ Sbjct: 188 QKVFERLGLDYRICAATAGAMGGSKSEEFLAPAEAGE-DTFADCPNCDFAANTEAIAYE 245 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 59/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%) Query: 270 SLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 P R IE+GHIF G KY+ + G +GK V MGSYGIG R VAA Sbjct: 396 PCPRCGTGLKLDRAIEIGHIFQLGRKYTDALKLDVLGQNGKPVRVTMGSYGIGVSRAVAA 455 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GE 386 + E + D KG+ WP VAP + + A + + + +L+ G V DD G Sbjct: 456 LAEQTADDKGLCWPQEVAPADVH--VVAAGKALQTELALDVSEKLAAAGVRVLVDDRPGV 513 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 G +F ++L+G P ++ G + ++ VE+K R TG RE++++EE I + Sbjct: 514 SPGVKFTDSELIGVPRILVAGRR-AAEGVVELKDRRTGEREELTVEEAIARLT 565 >gi|294786915|ref|ZP_06752169.1| threonine--tRNA ligase [Parascardovia denticolens F0305] gi|315226550|ref|ZP_07868338.1| threonine--tRNA ligase [Parascardovia denticolens DSM 10105] gi|294485748|gb|EFG33382.1| threonine--tRNA ligase [Parascardovia denticolens F0305] gi|315120682|gb|EFT83814.1| threonine--tRNA ligase [Parascardovia denticolens DSM 10105] Length = 687 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 65/462 (14%), Positives = 142/462 (30%), Gaps = 51/462 (11%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ Y + + RD ++ L + + G+ + P G ++ + R + Sbjct: 243 MKA--YLARLEEAAKRDHRKLGAEMDLFS-FPDEIGPGLAVFHPKGAAVINAMKEYSRLQ 299 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGP 108 + + P + L+ SG Y M R P Sbjct: 300 HRKNHYSFVQTPHITKGGLYETSGHLQWYKDGMYPPMRLDEERDENGNVIREGFDYYLKP 359 Query: 109 THEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTP 167 + + IF+S +SYR LP ++ +R E G+ R R D++ + Sbjct: 360 MNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDSHIYCTRE 419 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 + + L++ GL + + E + S + Sbjct: 420 QMRDEL-KSLLNFVLQLLKDFGLNDFYLELST----------------KDEHKFVGSDEI 462 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 + + + A Y + + D+L +VS ++ Sbjct: 463 WEEATKTLADVAKESGLELVDDPGGAAFYGPKI---SVQARDALGRTWQVSTIQLD---- 515 Query: 288 FYFGTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAP 346 F ++ + ADG + G++ A++ + +P +AP Sbjct: 516 FNLPERF----QLEYIAADGSRQRPVMIHRALFGSIERFFAILL---EHYAGAFPAWLAP 568 Query: 347 FKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIV 406 ++ + + D +++ RL + D ++ G + A P +IV Sbjct: 569 TQVLGVPVADSS---LDYLKEVLDRLDENLVRTELDASDDRFGKKIRNASKSKVPFILIV 625 Query: 407 GSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 G + V + R + ++ I + + ++ V Sbjct: 626 GDEDREKGAVSFRFRDGSQLNGVPADQAIAWITEAIDSHAQV 667 >gi|203288149|ref|YP_002223164.1| threonyl-tRNA synthetase [Borrelia recurrentis A1] gi|238690577|sp|B5RQ59|SYT_BORRA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|201085369|gb|ACH94943.1| threonyl-tRNA synthetase [Borrelia recurrentis A1] Length = 583 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 73/448 (16%), Positives = 158/448 (35%), Gaps = 39/448 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L + +E RD +L L + + G+ + P G + + REE + Sbjct: 172 KAYLKLQEEIKKRDHRKLGRELNLFSVH-DEIGPGLIFFHPHGARIRALIENFWREEHFK 230 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + LW SG D Y + M + + P + I+ + Sbjct: 231 NGYDILFTPHIGKSWLWETSGHLDFYKESMFEKIEMDRSDYYVKPMNCPFHIAIYNTDKH 290 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LPF + ++ +R E G MR R F DA+ + + ++ + Sbjct: 291 SYRDLPFRWAELGTVYRYEKIGAIHGTMRVRGFTQDDAHIICTYEQVNFE-VREVLRFAI 349 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++++ G ++ + P + D + D Sbjct: 350 DMWNKFGFTNLKAYLSTKP-----------------EKAVGDDDDWQMAVKVLEKALIDF 392 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I E A Y D+ K+ DSL +++ + F ++ + +A Sbjct: 393 NIDFDIDEGGGAFYGPKIDL---KIIDSLGRAWQMTTIQFD----FNLPVRFKMTYTAE- 444 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ ++ + G +W + I + + Sbjct: 445 --DGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPVW------LAPLQVVIIPVNSIVE 496 Query: 363 DACEKIYARLSKVGCDVFWDD-MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + ++ +R G + +D+ ++ ++ P I+G + V + K+ I+ R Sbjct: 497 EYALEVLSRFQNEGIRIKFDNYYNMRMNAKIRQYQSKKVPYMFIIGEREVVEGKISIRTR 556 Query: 422 LTGIREDMSLEEVINYASHRFSNNRPVL 449 + L+E + + + SN + +L Sbjct: 557 TNEQINGLELKEALEFVKLKISN-KEIL 583 >gi|156086662|ref|XP_001610740.1| threonyl-tRNA synthetase [Babesia bovis T2Bo] gi|154797993|gb|EDO07172.1| threonyl-tRNA synthetase, putative [Babesia bovis] Length = 736 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 81/446 (18%), Positives = 153/446 (34%), Gaps = 35/446 (7%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + +++ D + L L + HS G WLP G K + + +RE Sbjct: 312 KAYERRIEDAKANDHRLLGTTLNLFH-FDNIHSPGSCFWLPNGAKIYNRLVDFMRENYRL 370 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + S +LW SG YD+Y + M ++ + +F+ Sbjct: 371 RGYQEVITPNIYSCELWKTSGHYDNYKENMYMFT-VDEAEWGMKGMNCPGHCLMFKHMNP 429 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP F + R+EL G+ R R F DA+ F + S + L Sbjct: 430 SYRQLPLRFADFGVLHRNELTGSLSGLTRVRRFQQDDAHIFCTPEQISAEVLSM-----L 484 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + + + E+ T + + + + Sbjct: 485 KFIDDVYSLF--------------NFEYNFKLSTKPAKALGDDELWNKAEAGLQDALEKC 530 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTKYSLPMSA 300 ++ A Y DV L DSL + ++ F G + Sbjct: 531 GRPWTLNPGDGAFYGPKIDVI---LLDSLEREHQCGTVQLDFNLPIRFNLGYRDKDSEDN 587 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T G V + G++ A++ GK W ++P +++++ I Sbjct: 588 T-DCKRGYSRPVIVHRAIFGSLERFIAIVIEHMKGKLPFW---LSPTQVAVLPISDKH-- 641 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D KIY +L +G + + D + + + + +I+G + V V ++ Sbjct: 642 -LDYANKIYRKLLHLGYNCYVDSSANTMNKKIKLNQAQRYNYMLILGDREVETETVSVRA 700 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 + E ++LE++ + + + Sbjct: 701 MDSQDNEVLTLEQLYAKLADEAESYK 726 >gi|254368866|ref|ZP_04984879.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica FSC022] gi|157121787|gb|EDO65957.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica FSC022] Length = 565 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 113/333 (33%), Positives = 187/333 (56%), Gaps = 6/333 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+PLG K L + I+R+E Sbjct: 1 MKATQTLIATTKELPKEAVLISHQYMLKAGLIKKLASGIYTWMPLGLKVLQKIQNIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 61 MNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +++YN M+ + Sbjct: 121 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y I ++GL P++A++G IGGD SHEF VLA+ GE + C + D+ E Sbjct: 181 YCNILDKIGLAYRPVKADTGAIGGDNSHEFQVLANAGE-DIICYSNGSDYAANIELATYA 239 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 D ++ + +E+ P T + +++ + + + G+ F + Sbjct: 240 KPDLSKRVNSQNTIEKIHTPNIKTIEKLCKEMSFDIKKTIKTMVIKDAGGNFFALVIRGD 299 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 ++ T + + + A Sbjct: 300 HELNETKINKLDQIIAPYTLATKEEIFSIFNAN 332 Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats. Identities = 68/183 (37%), Positives = 102/183 (55%), Gaps = 3/183 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K GIEVGHIF YS PM+A G DGK + MG Y Sbjct: 383 ADIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVG 376 G G RV+AA IE SHD GIIWP+S+AP++++++ I ++ +K+ L G Sbjct: 443 GFGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSAKVKEVADKLCQDLLGDG 502 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD G + G FA ADL+G+ V++G + + +E K+R T ++++++ E+I Sbjct: 503 IDVLLDDRGARPGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITIAELIK 562 Query: 437 YAS 439 Sbjct: 563 ILK 565 >gi|17227831|ref|NP_484379.1| threonyl-tRNA synthetase [Nostoc sp. PCC 7120] gi|17129680|dbj|BAB72293.1| threonyl-tRNA synthetase [Nostoc sp. PCC 7120] Length = 615 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 153/442 (34%), Gaps = 39/442 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD +L L Q G+ W P G + +++EQ + G + + Sbjct: 203 EEALRRDHRKLGKELGLFI-FSEQVGPGLPLWTPKGTLLRSTLEQFLQQEQLKRGYLPVV 261 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKA------MIYGPTHEEVMTDIFRSHIKS 124 P + DL+ SG + Y ++M L ++ A + P + I++S ++S Sbjct: 262 TPHIARVDLFKTSGHWQKYKEDMFPLMAEDEAAAAIEQGFVLKPMNCPFHIQIYKSELRS 321 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR LP + +R E G + D +TPE + + + L + Sbjct: 322 YRELPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDNEFLNVVDLILSV 381 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F L LK+ R D + S + + + + + Sbjct: 382 FKSLQLKNFKARLS--------------FRDPASDKYIGSDEVWNKAEGAIRRAVEQLGM 427 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y D D+L ++ ++ + Sbjct: 428 EHFEGIGEAAFYGPKLDFI---FSDALEREWQLGTVQVDYNLP--------ERFDLEYVA 476 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + G++ + ++ + +P +AP + L+ + + D Sbjct: 477 EDGTRKRPVMIHRAPFGSLERLIGILI---EEYAGDFPLWLAPVQARLLPVG---EAQLD 530 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + A+L +G D G+++G A+ P+ +VG+K V + + I+ R + Sbjct: 531 FTKDVVAKLRSLGIRAEVDTSGDRLGKLIRNAEKDKIPVMAVVGAKEVETNSLSIRTRAS 590 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G + ++EV+ +N Sbjct: 591 GELGAIPVDEVVQKMKDAIANY 612 >gi|302558076|ref|ZP_07310418.1| prolyl-tRNA synthetase [Streptomyces griseoflavus Tu4000] gi|302475694|gb|EFL38787.1| prolyl-tRNA synthetase [Streptomyces griseoflavus Tu4000] Length = 566 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 103/239 (43%), Positives = 145/239 (60%), Gaps = 1/239 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ L+++P DAE+ SHKL++R G + + + GI++WLPLG+K L NV I+REE Sbjct: 8 RMSQLMAKTLRDDPADAEVLSHKLLVRAGYVRRTAAGIWTWLPLGKKVLANVERIVREEM 67 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + +GR+D YG E+ RL DR + GPTHEE+ T + + Sbjct: 68 DAIGAQEVLLPALLPREPYEATGRWDEYGPELFRLQDRKGGDYLLGPTHEEIFTLMVKDQ 127 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REFLMKD+YSFDL EG SY +Y Sbjct: 128 ASSYKDLPVILYQIQSKYRDEARPRAGILRGREFLMKDSYSFDLEDEGLAKSYALHRAAY 187 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++F RLGL A +G +GG S EF+ A+ GE F DF +E ++ Sbjct: 188 QKVFERLGLDYRICAATAGAMGGSKSEEFLAPAEAGE-DTFADCPNCDFAANTEAISYE 245 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 6/177 (3%) Query: 266 KLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 + D P+ R IE+GHIF G KY+ + G +GK V MGSYGIG R Sbjct: 392 QEGDPCPKCGTGLRLDRAIEIGHIFQLGRKYADALKLDVLGQNGKPVRVTMGSYGIGVSR 451 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 VAA+ E + D KG+ WP VAP + + A + + ++ +LS G V DD Sbjct: 452 AVAALAEQTADDKGLCWPAEVAPADVH--VVAAGKALQTELALEVSEKLSAAGLRVLVDD 509 Query: 384 M-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 G G +F ++L+G P ++ G + ++ VE+K R TG RE++++EE + + Sbjct: 510 RPGVSPGVKFTDSELIGVPQILVAGRR-AAEGVVELKDRRTGEREELTIEEALTRLT 565 >gi|239917575|ref|YP_002957133.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Micrococcus luteus NCTC 2665] gi|281413939|ref|ZP_06245681.1| threonyl-tRNA synthetase [Micrococcus luteus NCTC 2665] gi|259516574|sp|C5CBI2|SYT_MICLC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|239838782|gb|ACS30579.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Micrococcus luteus NCTC 2665] Length = 672 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 67/456 (14%), Positives = 128/456 (28%), Gaps = 49/456 (10%) Query: 5 KYFLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L + RD +L L + + G+ + P G + R Sbjct: 247 KAYQERLAEAERRDHRKLGAELDLFS-FPDELGSGLPVFHPRGGIIRKEMEDYSRRRHTE 305 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD-------------RNDKAMIYGPTH 110 G + P + L+ SG D Y M R + P + Sbjct: 306 AGYEFVYTPHITKQHLYEVSGHLDWYANGMFPPMHIDEVRDPETGEITRQGQNYYLKPMN 365 Query: 111 EEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEG 169 + I+RS +SYR LP ++ +R E G+ R R DA+ + + Sbjct: 366 CPMHNLIYRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTREQM 425 Query: 170 SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMD 229 + L + GL + + + S + + Sbjct: 426 KEEL-TTTLNFVLDLLKDYGLNDFHLELST----------------KDPEKFVGSDEIWE 468 Query: 230 FPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY 289 + + A Y + + D++ ++S ++ F Sbjct: 469 EATRTLAEVAEASGLQLVPDPGGAAFYGPKI---SVQARDAIGRTWQMSTIQLD----FN 521 Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 ++ L A + V + G++ V+ + G W I Sbjct: 522 LPERFDLEYQAA---DGTRQRPVMIHRALFGSIERFLGVLTEHYAGAFPAWLAPEQVVAI 578 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 + + D + + A+L G DD ++ + A P +I G + Sbjct: 579 PVA------EAFNDYLDDVVAKLRAEGIRARLDDSSDRFPKKIRTAAKEKAPFVLIAGGE 632 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + R + +EE I Sbjct: 633 DREAGAVSFRFRDGTQDNGVPVEEAIERIVKAVRER 668 >gi|117928565|ref|YP_873116.1| threonyl-tRNA synthetase [Acidothermus cellulolyticus 11B] gi|117649028|gb|ABK53130.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Acidothermus cellulolyticus 11B] Length = 685 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 71/446 (15%), Positives = 143/446 (32%), Gaps = 37/446 (8%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E R D +L L + + G+ + P G + R + + G Sbjct: 273 YLDLLREAERRDHRRLGVELDLFS-FPDEIGSGLAVFHPKGGIIRREMENYSRLQHEKAG 331 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKS 124 + ++ P + DL+ SG S+ + M + P + + I+RS +S Sbjct: 332 YLFVNTPHITKHDLFATSGHLQSFAEGMFPPFELDGGVTYYLKPMNCPMHILIYRSRGRS 391 Query: 125 YRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP ++ +R E G+ R+R F DA+ F + + L Sbjct: 392 YRELPMRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIFCTREQMGAEL-RDLLRFVLD 450 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + GL + + D S +F + D Sbjct: 451 LLRDYGLTDFYLELST----RDDSPKF-----------VGDPADWAQATEALEAAARDSG 495 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 A Y + + D++ + ++S ++ F ++ Sbjct: 496 LELVPDPGGAAYYGPKI---SVQARDAIGRSWQISTIQLD----FNLP----KRFDLEYQ 544 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 ADG + G++ V+ + +P +AP + I + D Sbjct: 545 AADGTRQRPVMIHRALFGSIERFFGVLL---EHYAGAFPPWLAPVQAVGIPV--SDAHVP 599 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + + A L G DD +++ + A P +I G ++ V ++R Sbjct: 600 YLRDTVGASLRAAGIRYEVDDSDDRMQKKIRNAAKQKIPYLLIAGDDDIARHAVSFRYRD 659 Query: 423 TGIREDMSLEEVINYASHRFSNNRPV 448 + + + + + V Sbjct: 660 GSQKNGVPIADAVAEIRDAIDRRIQV 685 >gi|227544954|ref|ZP_03975003.1| prolyl-tRNA synthetase [Lactobacillus reuteri CF48-3A] gi|300910015|ref|ZP_07127475.1| proline--tRNA ligase [Lactobacillus reuteri SD2112] gi|227185065|gb|EEI65136.1| prolyl-tRNA synthetase [Lactobacillus reuteri CF48-3A] gi|300892663|gb|EFK86023.1| proline--tRNA ligase [Lactobacillus reuteri SD2112] Length = 577 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 115/271 (42%), Positives = 159/271 (58%), Gaps = 6/271 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P +E P DAE SHK+M+R G I+Q S G++S+LPL + + V IIR+E Sbjct: 1 MKQSKVLIPTKKEAPSDAEALSHKMMIRAGYIYQVSAGVWSYLPLAYRVIRKVENIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM +P L ADLW ESGRY+SYG + +L DR D+ I GPTHEE T++ R Sbjct: 61 MDKAGAVEMLMPGLLPADLWKESGRYESYGDNLFKLKDRRDRDFILGPTHEETFTEVLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQ+Q KFRDE RPR+G++R +EF M D YSF EG +YN + Sbjct: 121 SIKSYKKLPLVVYQLQDKFRDEDRPRYGILRGKEFEMLDGYSFSADQEGLDEAYNNQAKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R+GL + A+SG +GG S EF A+ GE + + D+ E + Sbjct: 181 YRNIFDRIGLNYKVILADSGTMGGKNSQEFSAPAEVGEDIIAYTDG--DYAANIEKAESK 238 Query: 241 DII----SLNSIVEQWTAPYAATSDVHNEKL 267 + + +E+ P A T D E L Sbjct: 239 FTGVQQTAAPAPIEKKATPGAHTVDEAAESL 269 Score = 160 bits (404), Expect = 5e-37, Method: Composition-based stats. Identities = 70/190 (36%), Positives = 107/190 (56%), Gaps = 5/190 (2%) Query: 261 DVHNEKLFDSLPENK-RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 D N K + P+ K GIE+GHIF GT YS + A ++G+ V MGSYGI Sbjct: 387 DFRNVKEGEIAPDGKPLKFTPGIEIGHIFKLGTHYSSKLGAQVLDSNGRLTDVIMGSYGI 446 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G R+++AV E + D G++WP+S+APF + +I + A + +KI +L++ G +V Sbjct: 447 GVTRLLSAVAEQNADENGLVWPNSIAPFDVHVIPVNAKKEDQMAMADKIDQQLTEAGYEV 506 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY-- 437 DD E+ G +FA +DL+G P++V VG K D VEIK R TG ++ EE++N Sbjct: 507 LVDDRKERAGVKFADSDLIGIPIRVTVGKK-AQDGIVEIKIRKTGETVEVKQEELVNTVG 565 Query: 438 -ASHRFSNNR 446 + + + Sbjct: 566 ILLKQLNEEK 575 >gi|145224625|ref|YP_001135303.1| prolyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK] gi|145217111|gb|ABP46515.1| prolyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK] Length = 588 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 100/250 (40%), Positives = 146/250 (58%), Gaps = 1/250 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ SHKL++R G + G+YSWLPLG K L + I+R E Sbjct: 4 RMSELFLRTLRDDPADAEVPSHKLLIRAGYVRPVGPGLYSWLPLGLKVLRKIEHIVRSEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ P L + + R+ YG + RL DR D + GPTHEE+ T + Sbjct: 64 DAIGGQEILFPALLPRAPYETTNRWTEYGDTLFRLQDRRDNDYLLGPTHEEMFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ K+RDE RPR G++R REFLMKD+YSFD+ +G K++Y+ +Y Sbjct: 124 YSSYKDFPLRLYQIQNKYRDEARPRAGILRGREFLMKDSYSFDVDDDGLKNAYHAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGET-QVFCSKDFMDFPIPSENTDFD 240 RIF RL ++ + + A SG +GG S EF+ ++ GE V C++ + + T Sbjct: 184 QRIFDRLKVRYVIVSAVSGAMGGSASEEFLAESEVGEDTFVRCAQSGYAANVEAVVTTAP 243 Query: 241 DIISLNSIVE 250 D I L+ + E Sbjct: 244 DPIPLDGLPE 253 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 64/176 (36%), Positives = 94/176 (53%), Gaps = 4/176 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ V+ARGIE+GH+F G KY+ +A G +GK + MG Sbjct: 399 GTIEAAEVREGDPSPDGAGPLVAARGIEIGHVFQLGRKYADAFNADVLGENGKPVRLTMG 458 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VA + E HD G+ WP SVAPF + + I D R ++ L + Sbjct: 459 SYGIGVSRLVAVIAEQHHDELGLRWPGSVAPFAVH-VVIANKDAEARAGATELATALDRA 517 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 G DV DD G +F A+LLG P V+VG + +D VE++ R +G + ++ + Sbjct: 518 GADVLLDDRTASPGVKFKDAELLGVPWIVVVG-RGWADGVVELRDRFSGEKREIPV 572 >gi|152965404|ref|YP_001361188.1| prolyl-tRNA synthetase [Kineococcus radiotolerans SRS30216] gi|189083501|sp|A6W7Y5|SYP_KINRD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|151359921|gb|ABS02924.1| prolyl-tRNA synthetase [Kineococcus radiotolerans SRS30216] Length = 586 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 98/237 (41%), Positives = 138/237 (58%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S FL L+E+P +AE+ASHKL++R G + + + GIY+WLPLG K L V ++REE Sbjct: 3 MRMSTLFLRTLREDPVEAEVASHKLLVRAGYVRRAAPGIYTWLPLGLKVLRKVEQVVREE 62 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ P L + + + R+ YG + +L DR + PTHEE+ T + + Sbjct: 63 MDAAGAQEVHFPALLPREPYEATNRWSDYGDGIFKLKDRKGADYLLAPTHEEMFTLLVKD 122 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++LP + YQIQ K+RDE RPR G++R REF MKD+YSFD+ G + SY + Sbjct: 123 LYSSYKDLPLSIYQIQTKYRDEARPRAGIIRGREFTMKDSYSFDVDDAGLERSYELHRQA 182 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y+RIF RLGL + + A SG +GG S EF+ GE S + T Sbjct: 183 YVRIFERLGLDFVIVSAVSGAMGGSRSEEFLHPTAIGEDTFVRSPGGYAANAEAVTT 239 Score = 142 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 95/189 (50%), Gaps = 5/189 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 + K D P+ ARGIE+ HIF G +++ + +GK V MG Sbjct: 399 GFVEAAEVKAGDPAPDGSGPLELARGIEIAHIFALGRRFAQALDLKVLDENGKQVVVTMG 458 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R +A V E +HD KG++WP ++AP + ++ D E++ L Sbjct: 459 SYGVGVTRALACVAEGNHDEKGLVWPRALAPADVHVVATG-KDPEIFATAERLAGELVAQ 517 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD G +F A+L+G P ++VG K +++ VE+K R +G E ++L++ Sbjct: 518 GLEVLYDDRPKVSPGVKFKDAELIGVPTILVVG-KGLAEGLVELKDRRSGDSEQVALDDA 576 Query: 435 INYASHRFS 443 ++ + Sbjct: 577 VSRVATAVR 585 >gi|78060370|ref|YP_366945.1| threonyl-tRNA synthetase, class IIA [Burkholderia sp. 383] gi|77964920|gb|ABB06301.1| Threonyl-tRNA synthetase, class IIa [Burkholderia sp. 383] Length = 477 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 84/437 (19%), Positives = 149/437 (34%), Gaps = 52/437 (11%) Query: 17 DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS 76 D I +KL L Q G+ W P G + +R R G E+ P L + Sbjct: 71 DHRILGNKLGLF--HQQQEGPGMVFWHPRGWALYRVLEDYVRMRMRRAGFREIRTPQLLA 128 Query: 77 ADLWVESGRYDSYGKEMLRLADRNDKA------------MIYGPTHEEVMTDIFRSHIKS 124 LW SG +D +G +M L DR+ + P +F ++S Sbjct: 129 RSLWERSGHWDKFGSQMYALPDRSPIEPSADVDHDDALALCLKPMSCPCHVQVFNQGLRS 188 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP + + RDE G+ R+R F+ DA+ F T ++ + Sbjct: 189 YRELPIRYSEFGACHRDEPSGSLEGLKRTRAFVQDDAHVFC-TKSQIENEVARFCNLLRA 247 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ LG S+ + + P+ + D S Sbjct: 248 VYADLGFSSVTVALATRPMQR-----------------AGEEAVWDQAEASLAAAARAAG 290 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y + KL D + ++ F + ++A F Sbjct: 291 LEFELSEGEGAFYGPKLEF---KLADRRGREWQCGTIQLD----FVLPGR----LNAHFI 339 Query: 304 G-ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + ++ V + +G+M A++ ++G +W I + + Sbjct: 340 NAENVQETPVMLHHAVLGSMERFIAILLEHYEGWLPVW------LAPEQIVVASISDAHA 393 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 ++ L G V D E++ + A L P + VG++ + V I++R Sbjct: 394 PYAMRVVQMLDDAGLRVVADCRAERLERKIIDARKLQIPFLIAVGARDERNGTVSIRNR- 452 Query: 423 TGIREDMSLEEVINYAS 439 G + + L+E I S Sbjct: 453 NGDQVTLPLDEAITVLS 469 >gi|89256041|ref|YP_513403.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica LVS] gi|115314517|ref|YP_763240.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica OSU18] gi|156502051|ref|YP_001428116.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010208|ref|ZP_02275139.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica FSC200] gi|290953930|ref|ZP_06558551.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica URFT1] gi|295312679|ref|ZP_06803424.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica URFT1] gi|114152197|sp|Q2A4E9|SYP_FRATH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|122325457|sp|Q0BMT1|SYP_FRATO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|166980124|sp|A7NB07|SYP_FRATF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|89143872|emb|CAJ79090.1| Prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica LVS] gi|115129416|gb|ABI82603.1| proline--tRNA ligase [Francisella tularensis subsp. holarctica OSU18] gi|156252654|gb|ABU61160.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 565 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 113/333 (33%), Positives = 187/333 (56%), Gaps = 6/333 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+PLG K L + I+R+E Sbjct: 1 MKATQTLIATTKELPKEAVLISHQYMLKAGLIKKLASGIYTWMPLGLKVLQKIQNIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 61 MNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +++YN M+ + Sbjct: 121 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y I ++GL P++A++G IGGD SHEF VLA+ GE + C + D+ E Sbjct: 181 YCNILDKIGLAYRPVKADTGAIGGDNSHEFQVLANAGE-DIICYSNGSDYAANIELATYA 239 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 D ++ + +E+ P T + +++ + + + G+ F + Sbjct: 240 KPDLSKRVNSQNTIEKIHTPNIKTIEKLCKEMSFDIKKTIKTMVIKDAGGNFFALVIRGD 299 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 ++ T + + + A Sbjct: 300 HELNETKINKLDQIIAPYTLATKEEIFSIFNAN 332 Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 68/183 (37%), Positives = 102/183 (55%), Gaps = 3/183 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K GIEVGHIF YS PM+A G DGK + MG Y Sbjct: 383 ADIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVG 376 G G RV+AA IE SHD GIIWP+S+AP++++++ I ++ +K+ L G Sbjct: 443 GFGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKVKEVADKLCQDLLGDG 502 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD G + G FA ADL+G+ V++G + + +E K+R T ++++++ E+I Sbjct: 503 IDVLLDDRGARPGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITIAELIK 562 Query: 437 YAS 439 Sbjct: 563 LLK 565 >gi|219685509|ref|ZP_03540326.1| threonine--tRNA ligase [Borrelia garinii Far04] gi|219672908|gb|EED29930.1| threonine--tRNA ligase [Borrelia garinii Far04] Length = 581 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 68/443 (15%), Positives = 150/443 (33%), Gaps = 37/443 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L + +E R+ +L L + + G+ + P G K + REE ++ Sbjct: 172 RSYLNLREEIKKRNHRKLGKELDLFSIH-EEIGPGLIFFHPNGAKIRALIEDFWREEHSK 230 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + + LW SG D Y M + + P + I+ + Sbjct: 231 NGYDILFTPHVGKSWLWQTSGHLDFYKDSMFEKIEMDKSDYYLKPMNCPFHIAIYNTGKH 290 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LPF + ++ +R E G+MR+R F DA+ + ++ + Sbjct: 291 SYRDLPFRWAELGTVYRYEKIGALHGMMRARGFTQDDAHIICTHSQVVDE-IKEVLRFAI 349 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ + G S+ + P + + + + + Sbjct: 350 YMWSKFGFSSLKAYLSTKP-----------------DKSVGNDYDWEMSLKVLEEALSNF 392 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I + A Y D+ K+ DSL ++S + F ++++ +A Sbjct: 393 EVPYEIDKGGGAFYGPKIDL---KIVDSLEREWQMSTIQFD----FNLPERFNMTYTAE- 444 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + +G++ ++ + G +W I + Sbjct: 445 --DGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPLW------LSPVQAVIIPVNNTVE 496 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D K+ + G + D+ ++ ++ P I+G + + K+ I+ R Sbjct: 497 DYTIKVLNKFKNAGIRIKLDNSSSRMNAKIREYQAKKIPYMFIIGEREAIEEKISIRTRT 556 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + L+E + + + Sbjct: 557 NEQISGIELDEALKLILLKVRDK 579 >gi|302876555|ref|YP_003845188.1| prolyl-tRNA synthetase [Clostridium cellulovorans 743B] gi|307687227|ref|ZP_07629673.1| prolyl-tRNA synthetase [Clostridium cellulovorans 743B] gi|302579412|gb|ADL53424.1| prolyl-tRNA synthetase [Clostridium cellulovorans 743B] Length = 566 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 118/265 (44%), Positives = 162/265 (61%), Gaps = 1/265 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + ++E P +AEI+SH+LMLR G++ + + G+Y+++P+G KAL V IIR+E Sbjct: 1 MKLSKALMLTMREVPAEAEISSHQLMLRAGLMRKMASGVYNYMPMGLKALKKVEDIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E L A+LW ESGR+D+ G EM RL DRND+ GPTHEEV TDI R+ Sbjct: 61 MDKAGAQEFLASALIPAELWKESGRWDTMGPEMFRLKDRNDRDFCLGPTHEEVFTDIARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ K+RDE RPRFGVMRSREF+MKDAYSFD EG SYN M+ + Sbjct: 121 EIKSYKQLPITLYQIQTKYRDERRPRFGVMRSREFVMKDAYSFDKDSEGLDISYNAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R ++ A+SG +GG S EF+V ++ GE + D+ E + Sbjct: 181 YKNIFFRCDIECKAAEADSGAMGGSGSAEFMVKSEVGEDDIVFCSAC-DYAANIEKSPAT 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 + ++ + + E Sbjct: 240 AEVMKKEELKNLEKIHTPNAKTIEE 264 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 105/208 (50%), Gaps = 3/208 (1%) Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSL 296 ++ + V D + P+ RGIEVGHIF GTKYS Sbjct: 359 ANETDYHYTNVNYNRDFTGKVGDFRKVTEGEKCPKCGAPINIARGIEVGHIFKLGTKYSE 418 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 M+A F DG MG YGIG R +AAVIE +D GIIWP VAP+++ ++ Sbjct: 419 SMNAVFTDQDGTQKPFIMGCYGIGVNRTLAAVIEQHNDENGIIWPLEVAPYQVIVVPAVF 478 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D+V E++Y L +G DV DD E+ G +F ADLLG P+++ VG K +++ +V Sbjct: 479 KDEVQMKKAEELYDALKAIGVDVILDDRNERAGIKFKDADLLGIPMRITVGKK-IAEGEV 537 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSN 444 E K R + E ++ ++VI+ F Sbjct: 538 EFKLRSSADLEVIAYDKVIDRVKEEFKK 565 >gi|205356549|ref|ZP_03223312.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421] gi|205345554|gb|EDZ32194.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421] Length = 510 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 72/444 (16%), Positives = 151/444 (34%), Gaps = 40/444 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y I + RD +L L T + G+ WL G + + ++ + Sbjct: 102 LKEYLTIIEEAKKRDHRKLGTELKLFT-FDDEIGGGLPIWLSNGARLRSKLEHMLYKIHR 160 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P L AD W SG Y +Y + M +++ P + I++S + Sbjct: 161 LRGYEPVRGPELLKADAWKISGHYANYKENM-YFTQIDEQEYGIKPMNCVGHIKIYQSDV 219 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP F++ + R E G+ R REF DA+ F + P K ++ Sbjct: 220 RSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCM-PSQIKEQVLEILAFV 278 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + T + + + + D+ Sbjct: 279 DNLMKLFDFSYEMEI------------------STKPEKAIGDDEIWEIATKALKEALDE 320 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ K+ D+L + ++ F +++ Sbjct: 321 QGLKYGIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVD----FNLPSRF----KLE 369 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +D + + +G+ ++ + + + I + Sbjct: 370 YTDSDNEKKQPVMLHRAILGSFERFIGILTEHC------AGEFPFFIAPTAVGIVPIGEA 423 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ++I L ++ D + E + + +A+ P+ +++G V+ V ++ Sbjct: 424 HIAYAKEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRD 483 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R ++++SL+E I + S Sbjct: 484 RRAKEQKNLSLDEFIKLVKEKMSE 507 >gi|45656749|ref|YP_000835.1| prolyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|81830828|sp|Q72U06|SYP_LEPIC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|45599985|gb|AAS69472.1| prolyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 576 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 115/239 (48%), Positives = 159/239 (66%), Gaps = 1/239 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SKY LP +ENP DA +ASH+LM+R G++ + S G+Y +LPLG K L + I+REE Sbjct: 1 MKASKYILPTEKENPADAVVASHRLMIRAGLVRKSSAGLYFYLPLGLKVLKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N TGA+E +P L +D W +SGR+ + GKEM R+ DR+D + GPTHEE + + + Sbjct: 61 MNSTGALEFDLPILTPSDFWEQSGRWSAMGKEMFRIQDRHDLSYALGPTHEESFSFLLKP 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP YQIQ KFRDE+RPRFGV+RSREF+MKDAYSF + +Y M V+ Sbjct: 121 LLKSYKDLPVNVYQIQTKFRDEIRPRFGVIRSREFIMKDAYSFHIDDSSLDDTYQAMRVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y +IF R GLK+IP++A+SG +GG S EF+V++ GE + + SE T Sbjct: 181 YRKIFDRCGLKTIPVQADSGSMGGSASEEFMVVSPIGEETLLLCNSC-GYSSNSEKTPL 238 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 112/256 (43%), Gaps = 13/256 (5%) Query: 197 AESGPIGGDLSHE------FIVLADTGETQVFCSKDFMDFPIP-SENTDFDDIISLNSIV 249 A+S P+ E FI + + P + +D + I+ Sbjct: 312 ADSEPMTDLEIRELGLIPGFISPIAPNDKIKVLYDRSLQKDFPYVVGSSKEDFHTQGFIL 371 Query: 250 EQWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 E+ + +DV + D P + +GIEVGHIF G KY+ +G Sbjct: 372 EKEISGLPEFADVALAREGDLCPNCSSPLKAEKGIEVGHIFKLGDKYTKAFGIQVLDQNG 431 Query: 308 KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 K + G YGIG R +A VIE +D KGI WP S+APF++SL++I + E+ Sbjct: 432 KSKTLTTGCYGIGVNRTMATVIEQCNDEKGIFWPISIAPFEVSLVSIVKGEDQYSKI-EE 490 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 Y L G +VFWDD G + ++L+GFP+++ +G KF ++ I +R + Sbjct: 491 FYNVLINEGIEVFWDDRDLGPGFKLKDSELIGFPIRITIGKKFFESGEISIYNRKKDQED 550 Query: 428 DM---SLEEVINYASH 440 ++++ Sbjct: 551 SFVFSGFDDLVARVES 566 >gi|325000692|ref|ZP_08121804.1| threonyl-tRNA synthetase [Pseudonocardia sp. P1] Length = 682 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 68/453 (15%), Positives = 133/453 (29%), Gaps = 47/453 (10%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + G+ + P G + + RE G Sbjct: 251 YLERVAEAERRDHRRLGSELDLFS-FPDEIGSGLPVFHPKGGVVRKELEDLSRERHAAAG 309 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEV 113 + P L+ SG D Y M R P + + Sbjct: 310 YEFVYTPHATKGQLFELSGHLDWYADGMYPPMQLDAEYDAEGQLKRPAVDYYLKPMNCPM 369 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IF S +SYR LP ++ +R E G+ R+R F DA+ + + Sbjct: 370 HNLIFASRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTRDQMQDE 429 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 + L + GL + + S + + Sbjct: 430 -IRSLLQFVLDLLRDYGLDDFYLELSTRNPEKS----------------IGSDELWEEAT 472 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A YA + + D++ ++S +++ Sbjct: 473 DALREAAGNFGLELRDDPGGAAFYAPKI---SVQARDAIGRYWQMSTIQVDL----MLPD 525 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 ++ L +A G + V + G++ V+ + G W V I + Sbjct: 526 RFELEYTA---GDGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPVT 582 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 D +I ARL G + D +++ + L P ++ G + V Sbjct: 583 ------DTQEDYVREIAARLRAEGIRIDVDAGDDRMQKKIRTHTLQKVPFLLLAGGRDVE 636 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + R + +++ + + Sbjct: 637 AGAVSFRFRDGSQTNGVPVDDAVRSIVAWVRSR 669 >gi|71892071|ref|YP_277801.1| prolyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|114152172|sp|Q493B4|SYP_BLOPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|71796177|gb|AAZ40928.1| prolyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 581 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 102/222 (45%), Positives = 149/222 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P++ + SH+LMLR G+I Q S G+Y+WLP G + L + IIREE Sbjct: 1 MRTSQYLLATLKEAPKNCKAISHQLMLRAGLIRQVSSGLYTWLPTGLRVLRKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GAIE+++P +Q A LW +SGR+ YG E+LR +RN++ + GPTHEE++++I Sbjct: 61 MSKIGAIEIAMPIVQPARLWKKSGRWTGYGTELLRFKNRNNQEFVLGPTHEEMVSEIICK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 Y+ P YQI K+RDE RPR GV+R+REF+MKD YSF + + +++YN M+ + Sbjct: 121 ETMLYKQFPLIVYQIHTKYRDEARPRSGVIRAREFIMKDGYSFHINQKSLQNTYNNMYQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 Y IF+R+GL ++AE G IGG LSHEF ++ GE + Sbjct: 181 YHTIFNRIGLNFCVVQAEPGKIGGALSHEFQAYSENGEDSIA 222 Score = 120 bits (302), Expect = 4e-25, Method: Composition-based stats. Identities = 61/174 (35%), Positives = 95/174 (54%), Gaps = 4/174 (2%) Query: 273 ENKRVSARGIEVGHIFYFGTKYS--LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 +N IE+GHIF G KY + + ++MG YGIG R++A +IE Sbjct: 405 KNILSIHNCIEIGHIFQLGQKYLNLHTNYSQKNNEHKHNLSMEMGCYGIGITRIIAVIIE 464 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQV-CRDACEKIYARLSK-VGCDVFWDDMGEQI 388 ++D GI+WPD +APFK+++I I + V R+ EKIY +L +G D+ DD E Sbjct: 465 QNYDKNGILWPDVIAPFKLAIIPIDMYRSVNVRNIAEKIYTQLLSVIGIDILIDDRKEYP 524 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 G+ FA DL+G P +I+ + +++ +VE K+R E + LE +I Y + Sbjct: 525 GTMFADIDLIGIPHILIISDRSLANQEVEYKYRKKNKIEKIKLEMLIRYLIEKI 578 >gi|256379843|ref|YP_003103503.1| prolyl-tRNA synthetase [Actinosynnema mirum DSM 43827] gi|255924146|gb|ACU39657.1| prolyl-tRNA synthetase [Actinosynnema mirum DSM 43827] Length = 581 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 98/239 (41%), Positives = 139/239 (58%), Gaps = 1/239 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G + + + G YSWLPLG + L N+ ++REE Sbjct: 4 RMSSLFLRTLREDPADAEVPSHKLLVRAGYVRRVAPGGYSWLPLGLRVLRNIERVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ P L + + + R+ YG + RL DR + GPTHEE+ + Sbjct: 64 DAIGAQEIQFPALLPKEPYEATNRWTEYGPNIFRLKDRKGADYLLGPTHEELFALTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ K+RDE RPR G++R REF+MKD+YSFDLT EG +Y + +Y Sbjct: 124 YSSYKDYPVALYQIQTKYRDEARPRAGILRGREFVMKDSYSFDLTDEGLAEAYQRHRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++IF RLG+ + + A SG +GG S EF+ +A GE F D+ E Sbjct: 184 IKIFDRLGMDYVIVSATSGAMGGSASEEFLAVAPNGE-DTFVRSTESDYAANVEAVTTP 241 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 71/183 (38%), Positives = 103/183 (56%), Gaps = 4/183 (2%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T DV + D P+ K V+ARGIE+GHIF G KY+ S G DGK + MG Sbjct: 395 GTIDVAEVREGDPSPDGKGVLVAARGIEIGHIFQLGRKYADAFSLDALGPDGKPVRITMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VAA+ E SHD +G+IWP +VAP + ++ D + EK+ LS Sbjct: 455 SYGIGVSRLVAAIAEQSHDDRGLIWPRNVAPADVHVVVAG-KDATLLEGGEKLAGELSSA 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G V DD G +FA A+L+G P ++VG + ++ VE+K R +G R ++ ++E + Sbjct: 514 GLSVLLDDRKASPGVKFADAELVGVPTILVVG-RGLASGLVEVKDRRSGERVEVPVDEAV 572 Query: 436 NYA 438 + Sbjct: 573 QHV 575 >gi|148242044|ref|YP_001227201.1| threonyl-tRNA synthetase [Synechococcus sp. RCC307] gi|147850354|emb|CAK27848.1| Threonyl-tRNA synthetase [Synechococcus sp. RCC307] Length = 609 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 75/437 (17%), Positives = 132/437 (30%), Gaps = 40/437 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S++ I + RD L L + + + G+ W P G + + RE Sbjct: 192 LSEHKRRIEEAKRRDHRRIGTDLDLFS-IEDEAGAGLVFWHPRGARMRLLIEDFWREAHF 250 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P + DLW SG D Y + M +++ P + + S + Sbjct: 251 AGGYELLYTPHVADIDLWKTSGHLDFYRESMFGPMTVDEREYQLKPMNCPFHVLTYASTL 310 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY+ LP + ++ +R E G+MR R F DA+ F L + S K+ Sbjct: 311 RSYKELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDE-ILKILDLT 369 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I ++ + + P D Sbjct: 370 ETILSTFDFRNYEINLSTRPEKS-----------------IGDDAVWDLATKGLTEALQR 412 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ K+ D++ + S ++ FG Sbjct: 413 KGWDYKIDEGGGAFYGPKIDL---KIEDAIGRMWQCSTIQLDFNLPERFG--------LE 461 Query: 302 FKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + ADG M I R + E+ Sbjct: 462 YVAADGSRQRPIMIHRAIFGSLERFFGIMTENYAGDFPFWLAPEQIRLLPVT-------D 514 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 E I + LS G D GE++G + P+ ++G++ + ++ Sbjct: 515 EVMGYAETIQSELSAAGIRSRIDRSGERLGKLIRSGEQQKIPVLAVIGAQEAEQGTLSLR 574 Query: 420 HRLTGIREDMSLEEVIN 436 R G + +V+ Sbjct: 575 SRRQGDLGSVGRSQVLQ 591 >gi|326773248|ref|ZP_08232531.1| threonine--tRNA ligase [Actinomyces viscosus C505] gi|326636478|gb|EGE37381.1| threonine--tRNA ligase [Actinomyces viscosus C505] Length = 683 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 68/456 (14%), Positives = 138/456 (30%), Gaps = 45/456 (9%) Query: 5 KYFLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L + RD +L L + + G+ + P G + + + Sbjct: 246 KAYQTRLAEAAKRDHRKLGAELDLYS-FPEEIGPGLVVFHPKGAMLRHQIEQYVVDRHLD 304 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHE 111 G + P + L+ SG Y M + + + Sbjct: 305 YGFDFVHTPEISKGGLFHTSGHLPYYADTMFPPMLADEERDAEGNITKAGQEYYLKAMNC 364 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IFRS +SYR LP F+++ +R E G+ R R F D++++ + Sbjct: 365 PMHNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFTQDDSHTYCTPEQAG 424 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + +L I GL + + G +FI S Sbjct: 425 EE-IRAQIDFFLSILKAFGLTDFYLELSTRDEDGAKKDKFI-----------GSDADWTA 472 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + D A Y + ++ D++ ++S + Sbjct: 473 ATQALQDACDASGLEVVPDPGGAAFYGPKV---SVQVKDAIGRTWQMSTIQYDFNQP--- 526 Query: 291 GTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 + ADG + S +G++ V+ + +P ++P ++ Sbjct: 527 -----ERFDLEYTAADGTHQRPIMIHSAKLGSVERFIGVLT---EHYAGAFPAWLSPVQV 578 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 LI + + + + A+L G V D ++ G + P +I G + Sbjct: 579 RLIPVA---EAFDAYVDDVAAQLRAQGVRVEVDHSDDRFGKKIRNTSKDKIPFTLIAGGE 635 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + R + ++E + + Sbjct: 636 DAEAGAVSFRFRDGQQTNGVPVKEAVAHIVSVIDAR 671 >gi|260662303|ref|ZP_05863199.1| prolyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN] gi|260553686|gb|EEX26578.1| prolyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN] Length = 573 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 102/250 (40%), Positives = 147/250 (58%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P +E P DAE+ SHK+M+R G I+Q S G++++LPL + + + IIREE Sbjct: 1 MKQSQMLIPTQKEAPADAEVLSHKMMVRAGYIYQVSAGVWAYLPLAYRVIRKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+E+ +P L ADLW ESGRYD+YG + +L DR ++ I GPTHEE +T I R Sbjct: 61 MDKAGAVEILLPGLLPADLWKESGRYDAYGDNLFKLKDRRERDFILGPTHEETVTSILRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQ+Q K+RDE RPR+G++R +EF M D YSF G +Y+ + Sbjct: 121 AIHSYKKLPLVVYQLQDKYRDEDRPRYGILRGKEFEMLDGYSFSADQAGLDQAYDLQAKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R+GL + A+SG +GG S EF A GE + + + T F Sbjct: 181 YRNIFDRIGLDYKVILADSGTMGGKNSQEFSAPAAIGEDVIAYTDGDYAANLEKATTKFT 240 Query: 241 DIISLNSIVE 250 + E Sbjct: 241 PTKQIGEEAE 250 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 67/184 (36%), Positives = 99/184 (53%), Gaps = 2/184 (1%) Query: 261 DVHNEKLFDSLPEN-KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 D + ++ P+ GIE+GHIF GT YS AT +G+D + MG YGI Sbjct: 387 DFRTVQEGETAPDGLPIKFTNGIEIGHIFKLGTHYSEVFGATVLDQNGRDVPMIMGCYGI 446 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G R+++A+ E + D G++WP +VAPF I +I + A + E+I A L + G +V Sbjct: 447 GVSRLLSAISEQNADENGLVWPQAVAPFDIHVIPVNAKKEDQMAMAEEITANLEEAGYEV 506 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 DD E+ G +FA ADL+G P++V VG K + VEIK R TG ++ EE+ + Sbjct: 507 LVDDRKERAGVKFADADLIGVPIRVTVGKK-AGEGIVEIKIRKTGETLEVHKEELATNIA 565 Query: 440 HRFS 443 Sbjct: 566 ILLK 569 >gi|300858703|ref|YP_003783686.1| prolyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41] gi|300686157|gb|ADK29079.1| Prolyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41] Length = 585 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 105/282 (37%), Positives = 153/282 (54%), Gaps = 5/282 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R I + + G+Y+WLPLG + L + I+REE Sbjct: 4 RLSALFLRTLREDPADAEVPSHKLLVRARYIRRAAPGVYTWLPLGLRTLKKIENIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ P L + + + R+ YG + RL DR + GPTHEE+ + Sbjct: 64 DGIGAQELLFPALLPREPYQATNRWTEYGDSLFRLKDRKGADYLLGPTHEEMFAGAVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSFD+T +G + SY + +Y Sbjct: 124 YSSYKDFPVTLYQIQTKYRDEERPRAGILRGREFVMKDSYSFDMTDDGLESSYQRHRGAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RI RLG++ A SG +GG S EF+ +++ GE F ++ E Sbjct: 184 QRILDRLGVEYAICSATSGAMGGSASEEFLAISENGE-DTFVRATQGNYAANVEAVVTQ- 241 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 + +E P A D N + DSL + + IE Sbjct: 242 -PGVERSIEGL--PEAKEYDTPNSETIDSLVAWAQNAGITIE 280 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 59/184 (32%), Positives = 87/184 (47%), Gaps = 6/184 (3%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 + + D PE + ARGIEVGHIF G KY+ +GK MGSY Sbjct: 401 IEAAEVREGDPAPEGQGTLTLARGIEVGHIFQLGRKYTEAFDVQILDENGKRAIPTMGSY 460 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R++A + E HD KG+ WP VAPF + ++ D +A + + + L G Sbjct: 461 GIGVSRLMAVLAEQRHDEKGLNWPIEVAPFAVHVVVAN-KDTAAIEAGDALVSELDAAGV 519 Query: 378 DVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V +DD G +F A+LLG P V++G + + KVE++ R ++ E Sbjct: 520 EVLFDDRPKVSPGVKFKDAELLGMPYVVVLG-RSFKEGKVELRVRGE-EAVEIPAAEAAA 577 Query: 437 YASH 440 Sbjct: 578 RIID 581 >gi|254413846|ref|ZP_05027615.1| prolyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420] gi|196179443|gb|EDX74438.1| prolyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420] Length = 596 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 120/270 (44%), Positives = 160/270 (59%), Gaps = 5/270 (1%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 L L+E+P +AEI SHKL++R G I + GIY++LPL + L V+ I+REE N TG Sbjct: 1 MLLVTLREDPAEAEIPSHKLLVRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREEMNATG 60 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 A E +P LQ +DLW ESGR+D+Y K M L+DR ++ + GPTHEEV+T I R I Sbjct: 61 AQECLLPQLQPSDLWRESGRWDTYTKAEGIMFALSDRQNRELGLGPTHEEVITTIAREMI 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 +SYR LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF + + K +Y M +Y Sbjct: 121 RSYRQLPLHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHVNEDSLKKTYQDMDQAYR 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP--IPSENTDFD 240 + R GL + A+SG IGG S EF+VLAD GE ++ ++D + + D Sbjct: 181 NMISRCGLAFRAVEADSGAIGGSGSQEFMVLADIGEDEILYTEDGNYSANVEKASSLPAD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 S E+ P T D + L S Sbjct: 241 PQPSPFETYEKRETPNTPTIDSLCKFLNCS 270 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 1/172 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P SARGIE GHIF GTKYS M AT+ G+++ + MG YG+G R+ A +E Sbjct: 422 PSQILHSARGIEAGHIFQLGTKYSKAMGATYTNEAGEENPLYMGCYGVGVSRLAQAAVEQ 481 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 S+D GIIW ++AP+ + D +A E +Y +L + G + DD E+ G + Sbjct: 482 SYDKDGIIWAPAIAPYHAIITVPNISDTKQMEAAETLYQQLWQAGVETLLDDRNERAGVK 541 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 F ADL+G P +++ G + + KVE+ R T +++ L++V++ Sbjct: 542 FKDADLIGIPYRIVTG-RSLKQGKVEVAVRATHQSQELPLDQVVSTLKQWLD 592 >gi|194861340|ref|XP_001969762.1| GG23767 [Drosophila erecta] gi|190661629|gb|EDV58821.1| GG23767 [Drosophila erecta] Length = 746 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 73/432 (16%), Positives = 146/432 (33%), Gaps = 40/432 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + I+ E + G E+ Sbjct: 341 EEAAKRDHRKIGREQELF--FFHELSPGSCFFQPRGAHIYNTLMGFIKSEYRKRGFQEVI 398 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + +A LW+ SG + Y + M + P + IF + +S+R LP Sbjct: 399 SPNIYNAKLWMTSGHWQHYAENMFSFEAEKET-FALKPMNCPGHCLIFDNRNRSWRELPL 457 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + ++ G Sbjct: 458 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEM-KGCLEFLKYVYTIFG 516 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + P E A+ + ++ Sbjct: 517 FSFQLV-LSTRPDNYLGELEQWNDAEK-----------------ALAESLNEFGMPWKEN 558 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + + ++ F +++L A K Sbjct: 559 PGDGAFYGPKIDI---TIMDALKRAHQCATIQLD----FQLPIRFNLSYIA---DDGEKK 608 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + +G++ + A++ + WP ++P ++ ++ + + + Sbjct: 609 RPVIIHRAILGSVERMIAILT---ENFAGKWPFWLSPRQVMVVPVGP---AYDQYAQSVR 662 Query: 370 ARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L G D D G+ + + A L F ++VG K S + V ++ R + + Sbjct: 663 DQLHDAGFMSEADCDAGDTMNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGE 722 Query: 429 MSLEEVINYASH 440 +S+ E+I Sbjct: 723 VSVAELITKLQK 734 >gi|283955362|ref|ZP_06372861.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414] gi|283793122|gb|EFC31892.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414] Length = 602 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 150/444 (33%), Gaps = 40/444 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y I + RD +L L T + G+ WL G + + ++ + Sbjct: 194 LKEYLTIIEEAKKRDHRKLGAELKLFT-FDDEIGGGLPIWLSNGARLRSKLEHMLYKIHR 252 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P L AD W SG Y +Y + M +++ P + I++S++ Sbjct: 253 LRGYEPVRGPELLKADAWKISGHYANYKENM-YFTQIDEQEYGIKPMNCVGHIKIYQSNV 311 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP F++ + R E G+ R REF DA+ F + P K ++ Sbjct: 312 RSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCM-PSQIKEQVLEILAFV 370 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + T + + + + D+ Sbjct: 371 DNLMKLFDFSYEMEI------------------STKPEKAIGDDEIWEVATKALKEALDE 412 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ K+ D+L + ++ F ++ Sbjct: 413 QGLKYGIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVD----FNLPNRF----KLE 461 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + ++ + + +G+ ++ + + I I + Sbjct: 462 YTDSNNEKKQPVMLHRAILGSFERFIGILTEHC------AGEFPFFIAPTAIGIVPIGEA 515 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ++I L K D + E + + +A+ P+ +++G V+ V ++ Sbjct: 516 HIAYAKEIQKELLKFNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRD 575 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R ++++SL+E I + S Sbjct: 576 RRAKEQKNLSLDEFIKLVKEKMSE 599 >gi|270290317|ref|ZP_06196542.1| prolyl-tRNA synthetase [Pediococcus acidilactici 7_4] gi|270281098|gb|EFA26931.1| prolyl-tRNA synthetase [Pediococcus acidilactici 7_4] Length = 571 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 107/279 (38%), Positives = 160/279 (57%), Gaps = 3/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P ++E P DAE+ SHK+MLR G I Q S G+Y++LP+ K ++ + IIREE Sbjct: 1 MKQSKILIPTVKEVPNDAEVLSHKMMLRAGYIRQISAGMYAYLPMAYKVMEKIKRIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+EM P + A+LW +SGRY++YG+E+ + +R+D+ I GPTHEE MT + R Sbjct: 61 MTAIDAVEMLTPAVLPAELWKKSGRYETYGQELYKFKNRHDRDFILGPTHEETMTTLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ+K+RDE RPR+G++R REFLM DAYSF E S+ + Sbjct: 121 EVKSYKKLPLTLYQIQMKYRDEDRPRYGLLRGREFLMSDAYSFHADEETLDESFRAFEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--D 238 Y IF R GLK + ++G +GG S EF +A GE + S+ D+ E Sbjct: 181 YQNIFDRCGLKYREIVGDAGAMGGHDSKEFSAIASIGEDTIAYSE-ESDYAANLEMASSV 239 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV 277 ++D+ + E + + + + + Sbjct: 240 YEDLQMHENPAEIEKVATGDAHSIDEVAKELGVDDGRLI 278 Score = 159 bits (403), Expect = 7e-37, Method: Composition-based stats. Identities = 66/172 (38%), Positives = 96/172 (55%), Gaps = 1/172 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 + K +GIE+GHIF GTKYS + AT +G+ V MG YGIG R+++AV E Sbjct: 398 GKGKLKFTKGIEIGHIFKIGTKYSKALDATVLDQNGRAIPVIMGCYGIGVSRLLSAVSEQ 457 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 D G++WP ++APF + +I + A + ++I L G DV DD E+ G + Sbjct: 458 LADENGLVWPKNIAPFDVHVIPVNAKNDEQMQVADQINTELVAAGYDVLIDDRKERAGVK 517 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 FA +DL+G PL+V VG K S+ VE+K R TG ++ L E+ N + Sbjct: 518 FADSDLIGIPLRVTVGKK-ASEGIVEVKLRQTGETVEVKLAELKNTVEILLN 568 >gi|148543925|ref|YP_001271295.1| prolyl-tRNA synthetase [Lactobacillus reuteri DSM 20016] gi|184153321|ref|YP_001841662.1| prolyl-tRNA synthase [Lactobacillus reuteri JCM 1112] gi|227364834|ref|ZP_03848881.1| prolyl-tRNA synthetase [Lactobacillus reuteri MM2-3] gi|325682540|ref|ZP_08162057.1| proline--tRNA ligase [Lactobacillus reuteri MM4-1A] gi|166980132|sp|A5VJD4|SYP_LACRD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701303|sp|B2G6V0|SYP_LACRJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|148530959|gb|ABQ82958.1| prolyl-tRNA synthetase [Lactobacillus reuteri DSM 20016] gi|183224665|dbj|BAG25182.1| prolyl-tRNA synthase [Lactobacillus reuteri JCM 1112] gi|227070097|gb|EEI08473.1| prolyl-tRNA synthetase [Lactobacillus reuteri MM2-3] gi|324978379|gb|EGC15329.1| proline--tRNA ligase [Lactobacillus reuteri MM4-1A] Length = 577 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 109/250 (43%), Positives = 150/250 (60%), Gaps = 2/250 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P +E P DAE SHK+M+R G I+Q S G++S+LPL + + V IIR+E Sbjct: 1 MKQSKVLIPTKKEAPSDAEALSHKMMIRAGYIYQVSAGVWSYLPLAYRVIRKVENIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM +P L ADLW ESGRY+SYG + +L DR D+ I GPTHEE T++ R Sbjct: 61 MDKAGAVEMLMPGLLPADLWKESGRYESYGDNLFKLKDRRDRDFILGPTHEETFTEVLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQ+Q KFRDE RPR+G++R +EF M D YSF EG +YN + Sbjct: 121 SIKSYKKLPLVVYQLQDKFRDEDRPRYGILRGKEFEMLDGYSFSADQEGLDEAYNNQAKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R+GL + A+SG +GG S EF A+ GE + + D+ E + Sbjct: 181 YRNIFDRIGLNYKVILADSGTMGGKNSQEFSAPAEVGEDIIAYTDG--DYAANIEKAESK 238 Query: 241 DIISLNSIVE 250 + V Sbjct: 239 FTGVQQTAVP 248 Score = 159 bits (402), Expect = 8e-37, Method: Composition-based stats. Identities = 70/190 (36%), Positives = 106/190 (55%), Gaps = 5/190 (2%) Query: 261 DVHNEKLFDSLPEN-KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 D N K + P+ GIE+GHIF GT YS + A ++G+ V MGSYGI Sbjct: 387 DFRNVKEGEIAPDGQPLKFTPGIEIGHIFKLGTHYSSKLGAQVLDSNGRLTDVIMGSYGI 446 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G R+++AV E + D G++WPDS+APF + +I + A + +KI +L++ G +V Sbjct: 447 GVTRLLSAVAEQNADENGLVWPDSIAPFDVHVIPVNAKKEDQMAMADKIDQQLTEAGYEV 506 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY-- 437 DD E+ G +FA +DL+G P++V VG K D VEIK R TG ++ EE++N Sbjct: 507 LVDDRKERAGVKFADSDLIGIPIRVTVGKK-AQDGIVEIKIRKTGETVEVKQEELVNTVG 565 Query: 438 -ASHRFSNNR 446 + + + Sbjct: 566 ILLKQLNEEK 575 >gi|296536619|ref|ZP_06898695.1| threonine--tRNA ligase [Roseomonas cervicalis ATCC 49957] gi|296263053|gb|EFH09602.1| threonine--tRNA ligase [Roseomonas cervicalis ATCC 49957] Length = 660 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 136/443 (30%), Gaps = 46/443 (10%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E R D ++ L + + + G W P G + + +R Q G Sbjct: 232 YLHQLEEAERRDHRKIGKEMGLF--HLQEEAVGSIFWHPKGWRLYTTLQDYMRRRQEAGG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA----MIYGPTHEEVMTDIFRSH 121 E+ P L LW SG +D Y + M ++ + P + IF Sbjct: 290 YQEVRTPQLVDRKLWEASGHWDKYRENMFIATVDDESEKDRVLALKPMNCPCHVQIFNHG 349 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP + R E G+MR R F+ DA+ F + + + Sbjct: 350 LRSYRELPLRMAEFGACHRYEPSGALHGIMRVRSFVQDDAHIFCAEDQIAAETVEF-VAL 408 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++ LG ++ P S E D + Sbjct: 409 LSAVYRDLGFTDFRVKFSDRPEKRAGSDE-----------------TWDRSEGALKEACR 451 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + A Y + L D++ + + ++ F + + A Sbjct: 452 IAGVEYELNPGEGAFYGPKLEF---VLRDAIGRDWQCGTLQVD----FVLPER----LDA 500 Query: 301 TFKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + G DG H M I R + +IE + + Sbjct: 501 EYVGEDGNRHRPVMLHRAILGSFERFLGILIEEHAGRFPLWLAPVQVAVATIVDEAAPFA 560 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + A K G V D E+I + P+ ++G + KV + Sbjct: 561 REAAAAFRK-------AGLSVELDLRNEKINRKVVDHIEQRVPVLAVIGRREAEQGKVVL 613 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + +MSL E + + Sbjct: 614 RRLPGREQVEMSLAEAVATLAAE 636 >gi|163781697|ref|ZP_02176697.1| prolyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] gi|159882917|gb|EDP76421.1| prolyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] Length = 570 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 112/239 (46%), Positives = 154/239 (64%), Gaps = 1/239 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFL L+E+P +AE SH+L+L+ G I Q S GIY LP G + + + +I+R+E Sbjct: 1 MRWSRYFLYTLKEDPAEAEAPSHRLLLKAGFIKQVSAGIYEILPAGWRVIRKIESIVRKE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ + L A+LW E+GR+D+YG E+ RL DR+ + GPTHEE +TD+ R Sbjct: 61 MDRSGAQELLLTVLNPAELWKETGRWDTYGNELFRLKDRSGREYCLGPTHEEEITDLVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP T YQIQ+KFRDE RPRFG++R REF+MKDAYSFD + SY M + Sbjct: 121 VVHSYRQLPVTLYQIQVKFRDEKRPRFGLIRGREFIMKDAYSFDADEFSATMSYENMKFA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y R+F +L L+ I +A +G IGG SHEFI D GE +V + + +E Sbjct: 181 YDRVFKKLRLEVIMAQASTGQIGGKQSHEFIAFTDYGEAKVGYCESC-GYAANAEIIPL 238 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 75/193 (38%), Positives = 111/193 (57%), Gaps = 3/193 (1%) Query: 256 YAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 Y DV D P+ RG+E+GHIF GT+YS PM A F +G + + Sbjct: 378 YGEFVDVAEVVEGDPCPQCGSPLKVKRGLELGHIFLLGTRYSEPMKAYFTDPEGNEKPII 437 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R+++A++E HD KGI WP VAPF++ +I + D + EK+Y Sbjct: 438 MGCYGIGISRIMSAIVEQYHDDKGIKWPTPVAPFELEIICLNMSDSQMTEVAEKLYLEAE 497 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 + G +V +DD E G +FA ADL+GFP +++VG K V + KVE++ R TG + D+ +EE Sbjct: 498 EKGIEVIYDDREESAGFKFADADLVGFPYRIVVGRK-VKEGKVELQKRATGEKLDVPVEE 556 Query: 434 VINYASHRFSNNR 446 VI+ + ++ Sbjct: 557 VIDRVKEMIAEDK 569 >gi|304384864|ref|ZP_07367210.1| proline--tRNA ligase [Pediococcus acidilactici DSM 20284] gi|304329058|gb|EFL96278.1| proline--tRNA ligase [Pediococcus acidilactici DSM 20284] Length = 571 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 107/279 (38%), Positives = 160/279 (57%), Gaps = 3/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P ++E P DAE+ SHK+MLR G I Q S G+Y++LP+ K ++ + IIREE Sbjct: 1 MKQSKILIPTVKEVPNDAEVLSHKMMLRAGYIRQISAGMYAYLPMAYKVMEKIKRIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+EM P + A+LW +SGRY++YG+E+ + +R+D+ I GPTHEE MT + R Sbjct: 61 MTAIDAVEMLTPAVLPAELWKKSGRYETYGQELYKFKNRHDRDFILGPTHEETMTTLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ+K+RDE RPR+G++R REFLM DAYSF E S+ + Sbjct: 121 EVKSYKKLPLTLYQIQMKYRDEDRPRYGLLRGREFLMSDAYSFHADEETLDESFRAFEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--D 238 Y IF R GLK + ++G +GG S EF +A GE + S+ D+ E Sbjct: 181 YQNIFDRCGLKYREIVGDAGAMGGHDSKEFSAIASIGEDTIAYSE-ESDYAANLEMASSV 239 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV 277 ++D+ + E + + + + + Sbjct: 240 YEDLQMHENPAEIEKVATGDAHSIDEVAKELGVDDGRLI 278 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 77/251 (30%), Positives = 117/251 (46%), Gaps = 19/251 (7%) Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 R E I D E +V + G + ++ + + D + ++ E Sbjct: 337 FDKRPEDIQIVADKYVEQMVNSVIGANEDGYHYTNVNV---GRDFNVDQFADIRTVKEGE 393 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 AP + K +GIE+GHIF GTKYS + AT +G+ V Sbjct: 394 LAPDG---------------KGKLKFTKGIEIGHIFKIGTKYSKALDATVLDQNGRAIPV 438 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R+++AV E D G++WP ++APF + +I + A + ++I L Sbjct: 439 IMGCYGIGVSRLLSAVSEQLADENGLVWPKNIAPFDVHVIPVNAKNDEQMQVADQINTEL 498 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G DV DD E+ G +FA +DL+G PL+V VG K S+ VE+K R TG ++ L Sbjct: 499 VAAGYDVLIDDRKERAGVKFADSDLIGIPLRVTVGKK-ASEGIVEVKLRQTGETVEVKLA 557 Query: 433 EVINYASHRFS 443 E+ N + Sbjct: 558 ELKNTVEILLN 568 >gi|260434317|ref|ZP_05788287.1| threonyl-tRNA synthetase [Synechococcus sp. WH 8109] gi|260412191|gb|EEX05487.1| threonyl-tRNA synthetase [Synechococcus sp. WH 8109] Length = 611 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 69/426 (16%), Positives = 135/426 (31%), Gaps = 36/426 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD L L + + + G+ W P G + + R+ G + Sbjct: 203 EEALRRDHRRIGKDLDLFS-IEDEAGAGLVFWHPRGARMRLLIEEFWRQAHFEGGYELLY 261 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + LW SG D Y + M + +++ P + + S ++SYR LP Sbjct: 262 TPHVADISLWKTSGHLDFYAESMFGPMEVDEREYQLKPMNCPFHVLTYASKLRSYRELPI 321 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + ++ +R E G+MR R F DA+ F L + S K+ RI Sbjct: 322 RWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDE-ILKILDLTERILSSFD 380 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + + P D D I Sbjct: 381 FSNYEINLSTRPEKS-----------------IGDDTVWDLATKGLIEALDRKGWAYKID 423 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 E A Y D+ K+ D++ + S ++ F ++ L A + Sbjct: 424 EGGGAFYGPKIDL---KIEDAIGRMWQCSTIQLD----FNLPERFDLDYVAA--DGSKQR 474 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + + R + E+ + E++ Sbjct: 475 PIMIHRAIFGSLERFFGIMTENYAGDYPFWLAPEQVRLLPVT-------DEVQPYAEQVL 527 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +L+K G D G+++G + + P+ ++G+K + V ++ R G Sbjct: 528 DQLTKAGVRATIDRSGDRLGKLIRTGEQIKIPVLAVIGAKEAEQNAVSLRSRRDGDLGVT 587 Query: 430 SLEEVI 435 ++ +++ Sbjct: 588 AVADLL 593 >gi|260903858|ref|ZP_05912180.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Brevibacterium linens BL2] Length = 668 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 72/451 (15%), Positives = 139/451 (30%), Gaps = 44/451 (9%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + G+ + P G + +R G + Sbjct: 248 EAERRDHRKLGAELDLFS-FPEELGSGLPVFHPKGGVIKREMEDYVRARHIEEGFEYVGT 306 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDIFR 119 P + L+ SG YG+ M + + + IFR Sbjct: 307 PHISKEALYYTSGHLPYYGENMFPPISVDEVRDESGEIVKEGTPYRLKAMNCPMHNLIFR 366 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 S +SYR LP ++ +RDE G+ R R D++S+ + +K + Sbjct: 367 SRGRSYRELPLRLFEFGTVYRDEASGVVHGLTRVRALTQDDSHSYVAQEDAAKE-IRHLL 425 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L + GL + + G +FI + Sbjct: 426 EFVLSLLRDFGLNDFYLELSTRDEDGKKKDKFIGSDEQ-----------WAEATQVLEEV 474 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + A Y + + D++ ++S ++ FG Sbjct: 475 ASETGLELVPDPGGAAFYGPKV---SVQARDAIGRTWQMSTVQLDFNQPERFG------- 524 Query: 299 SATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 ++ ADG + S G++ V+ + +P +AP +++ I + Sbjct: 525 -LEYQAADGTRKQPVMIHSAKFGSIERFMGVLI---EHYAGAFPVWLAPVQVTCIPVA-- 578 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + D ++ A+L G V DD ++ + A P +I G + V Sbjct: 579 -EEFNDYLAEVAAQLKAAGVRVEIDDSDDRFPKKIRNASKSKVPFVLIAGGDDRDANAVS 637 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 + R +S+ E ++ V Sbjct: 638 FRFRDGEQDNGVSVAEAVSRIVESIETKAQV 668 >gi|319948036|ref|ZP_08022210.1| prolyl-tRNA synthetase [Dietzia cinnamea P4] gi|319438275|gb|EFV93221.1| prolyl-tRNA synthetase [Dietzia cinnamea P4] Length = 581 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 126/438 (28%), Positives = 183/438 (41%), Gaps = 49/438 (11%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+++P DAE+ SHKL++R G I + + G+YSWLPLG + L V ++REE Sbjct: 4 RLSHLFLRTLRDDPSDAEVLSHKLLVRAGYIRRVAPGVYSWLPLGLRTLRRVEQVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+S+P L + + +GR+ YG + RL DR M+ GPTHEE+ T + Sbjct: 64 DAFGAQEISLPALLPREPYETTGRWTEYGPALFRLKDRKGNDMMLGPTHEELFTLTVQGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G SY +Y Sbjct: 124 YSSYKDLPVTLYQIQTKYRDEERPRAGILRGREFVMKDSYSFDVDDAGLGRSYRAHRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF RLG++ + A SG +GG S EF+ ++ GE F + E Sbjct: 184 QRIFDRLGIEYVICAATSGAMGGSASEEFLAVSAAGE-DTFVRSTDGAYAANVEAVVTPA 242 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 P A D + DSL + G E+G + Sbjct: 243 ----PPARPLEGLPEATVHDTPDTPTIDSLVAWANSAGLGREIGAADTL-----KNVMLK 293 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + + + +G G D + + A + ++ D Sbjct: 294 VRRPGEEWELLAVGLPG---------------DREVDMKRVEAALEPAEVAILEEADFAA 338 Query: 362 RDACEKIY---ARLSKVGCDVFWDDM-----------GEQIGSQFAVADLLGFPLQVIVG 407 K Y L D E G ++ G Sbjct: 339 NPFLVKGYIGPRALRDNEVRYLVDPRVVEGTAWITGADE-PGRHVVD---------LVCG 388 Query: 408 SKFVSDSKVEIKHRLTGI 425 F D +E+ G Sbjct: 389 RDFTPDGTIEVAEVREGD 406 Score = 140 bits (352), Expect = 6e-31, Method: Composition-based stats. Identities = 61/187 (32%), Positives = 89/187 (47%), Gaps = 4/187 (2%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T +V + D P+ ARGIE+GHIF G KY+ G +GK V MG Sbjct: 395 GTIEVAEVREGDPAPDGHGTLTLARGIEIGHIFQLGRKYTDAFGFDVLGENGKPARVTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VA + E D KG++WP AP + + I DQ D + + Sbjct: 455 SYGIGVSRLVAVLAEQFADDKGLVWPAEAAPADVH-VVIANKDQAAIDGAATLVEAFDRA 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +V +DD G +F A+L+G P V+VG + S+ VE++HR TG ++++ Sbjct: 514 RLEVLFDDRKASPGVKFKDAELIGVPWVVVVG-RGWSEGTVELRHRATGDVTQVAVDGAA 572 Query: 436 NYASHRF 442 Sbjct: 573 EEIIRLI 579 >gi|56708459|ref|YP_170355.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis SCHU S4] gi|110670930|ref|YP_667487.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC198] gi|224457616|ref|ZP_03666089.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|254371083|ref|ZP_04987085.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254875304|ref|ZP_05248014.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|81820763|sp|Q5NF37|SYP_FRATT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|123359400|sp|Q14GJ0|SYP_FRAT1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|56604951|emb|CAG46045.1| Prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis SCHU S4] gi|110321263|emb|CAL09428.1| Prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC198] gi|151569323|gb|EDN34977.1| hypothetical protein FTBG_00840 [Francisella tularensis subsp. tularensis FSC033] gi|254841303|gb|EET19739.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|282159660|gb|ADA79051.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis NE061598] Length = 565 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 113/333 (33%), Positives = 188/333 (56%), Gaps = 6/333 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+PLG K L + I+R+E Sbjct: 1 MKATQTLIATTKELPKEAVLISHQYMLKAGLIKKLASGIYTWMPLGLKVLQKIQNIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 61 MNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +++YN M+ + Sbjct: 121 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y I ++GL P++A++G IGGD SHEF VLA+ GE + C + D+ E Sbjct: 181 YCNILDKIGLAYRPVKADTGAIGGDNSHEFQVLANAGE-DIICYSNGSDYAANIELATYA 239 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 +D ++ + +E+ P T + +++ + + + G+ F + Sbjct: 240 KSDLSKRVNSQNTIEKIHTPNIKTIEKLCKEMSFDIKKTIKTMVIKDAGGNFFALVIRGD 299 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 ++ T + + + A Sbjct: 300 HELNETKINKLDQIIAPYTLATKEEIFSIFNAN 332 Score = 154 bits (388), Expect = 4e-35, Method: Composition-based stats. Identities = 69/183 (37%), Positives = 103/183 (56%), Gaps = 3/183 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K GIEVGHIF YS PM+A G DGK + MG Y Sbjct: 383 ADIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVG 376 G G RV+AA IE SHD GIIWP+S+AP++++++ I ++ +K+Y L G Sbjct: 443 GFGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKIKEVADKLYQDLLGDG 502 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD G + G FA ADL+G+ V++G + + +E K+R T ++++++ E+I Sbjct: 503 IDVLLDDRGARPGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITIAELIK 562 Query: 437 YAS 439 Sbjct: 563 ILK 565 >gi|331698443|ref|YP_004334682.1| Prolyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190] gi|326953132|gb|AEA26829.1| Prolyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190] Length = 577 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 99/238 (41%), Positives = 140/238 (58%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S FL L+E+P DAE+ SHKL++R G + + + G+YSWLPLG + L + I+REE + Sbjct: 1 MSSLFLRTLREDPADAEVPSHKLLVRAGYVRRVAPGVYSWLPLGLRVLRRIEEIVREEMD 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+ P L D + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 61 AIGAQEIQFPALLPRDPYESTNRWTEYGPNLFRLKDRKGNDYLLGPTHEELFTLAVKGEY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++ P YQIQ K+RDE RPR G++R REFLMKD+YSFDL+ EG SY +Y+ Sbjct: 121 SSYKDYPVILYQIQNKYRDEERPRAGILRGREFLMKDSYSFDLSDEGLSESYALHRKAYV 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++F RL L+ + + A SG +GG S EF+ A+TGE S+ + + T Sbjct: 181 KVFDRLSLRYVIVSATSGAMGGSASEEFLAEAETGEDTYVRSESGYAANVEAVVTPAP 238 Score = 146 bits (369), Expect = 6e-33, Method: Composition-based stats. Identities = 65/183 (35%), Positives = 101/183 (55%), Gaps = 4/183 (2%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ + SARGIE+GHIF G KY+ G D K + MG Sbjct: 391 GTIEAAEVRDGDPSPDGRGTLESARGIEIGHIFQLGRKYTNAFGLDALGPDSKPVRITMG 450 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VA + E SHD G++WP +V+P+ + ++ ++ EK+ A L Sbjct: 451 SYGIGVSRLVAVIAEQSHDESGLVWPRAVSPYDVHVVVAG-KNEEITAGGEKLAAELEAA 509 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G V DD G +FA A+L+G P V+VG + ++D K+E+K R +G RE+++L+ + Sbjct: 510 GLSVLLDDRKASPGVKFADAELVGVPTIVVVG-RGLADGKIEVKDRRSGEREEIALDGAV 568 Query: 436 NYA 438 + Sbjct: 569 AHL 571 >gi|208779640|ref|ZP_03246985.1| prolyl-tRNA synthetase [Francisella novicida FTG] gi|208744601|gb|EDZ90900.1| prolyl-tRNA synthetase [Francisella novicida FTG] Length = 565 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 113/333 (33%), Positives = 187/333 (56%), Gaps = 6/333 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+PLG K L + I+R+E Sbjct: 1 MKATQTLIATTKELPKEAVLISHQYMLKAGLIKKLASGIYTWMPLGLKVLQKIQNIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 61 MNKAGASELLLPSILPSELLQETHRWDKFGPELLKLNDRHNRDFCYGPTHEEPIVDMARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +++YN M+ + Sbjct: 121 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y I ++GL P++A++G IGGD SHEF VLA+ GE + C + D+ E Sbjct: 181 YCNILDKIGLAYRPVKADTGAIGGDNSHEFQVLANAGE-DIICYSNGSDYAANIELATYA 239 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 D ++ + +E+ P T + +++ + + + G+ F + Sbjct: 240 KPDLSKRVNSQNTIEKIHTPNIKTIEKLCKEMSFDIKKTIKTMVIKDAEGNFFALVIRGD 299 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 ++ T + + + A Sbjct: 300 HELNETKINKLEQIVAPYTLATKEEIFSIFNAN 332 Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats. Identities = 69/183 (37%), Positives = 104/183 (56%), Gaps = 3/183 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K GIEVGHIF YS PM+A G DGK + MG Y Sbjct: 383 ADIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVG 376 G G RV+AA IE SHD GIIWP+S+AP++++++ I ++ +K+Y L G Sbjct: 443 GFGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKVKEVADKLYQDLLGDG 502 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD G + G FA ADL+G+ V++G + + +E K+R T ++++++ E+I Sbjct: 503 IDVLLDDRGARPGVMFADADLIGYSHHVVIGDRLLEQELIEYKNRKTQEKQEITIAELIK 562 Query: 437 YAS 439 + Sbjct: 563 ILT 565 >gi|78184510|ref|YP_376945.1| threonyl-tRNA synthetase [Synechococcus sp. CC9902] gi|123757112|sp|Q3AYC6|SYT_SYNS9 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|78168804|gb|ABB25901.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Synechococcus sp. CC9902] Length = 611 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 71/439 (16%), Positives = 143/439 (32%), Gaps = 36/439 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD L L + + + G+ W P G + + R+ G + Sbjct: 204 EALRRDHRRLGKDLELFS-IEDEAGAGLVFWHPRGARMRLLIEDFWRQAHFEGGYELLYT 262 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + LW SG D Y + M +++ P + + S ++SYR LP Sbjct: 263 PHVADISLWKTSGHLDFYAESMFGPMQVDEREYQLKPMNCPFHVLTYASKLRSYRELPIR 322 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + ++ +R E G+MR R F DA+ F L + S ++ RI Sbjct: 323 WAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPDQISDE-ILRILDLTERILSTFDF 381 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + + P S+ + + I E Sbjct: 382 NHYEINLSTRPEKS-----------------IGSEAVWELATKGLTEALERKGWNFKIDE 424 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D+ K+ D++ + S ++ FG Y K Sbjct: 425 GGGAFYGPKIDL---KIEDAIGRMWQCSTIQLDFNLPERFGLDY-------VAADGSKQQ 474 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + + G++ ++ ++ G W + + + E++ Sbjct: 475 PIMIHRAIFGSLERFFGIMTENYAGDFPFWLAPEQIRLLPVT------DDVQPYAEQVLN 528 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +L G D G+++G + + P+ ++G+K + + ++ R G S Sbjct: 529 QLKTAGIRATIDQSGDRLGKIIRTGEQMKIPVLAVIGAKEAEQNAISLRSRRDGDLGVTS 588 Query: 431 LEEVINYASHRFSNNRPVL 449 ++ ++ A + +P L Sbjct: 589 VDALLKAAQRANAERQPGL 607 >gi|257068210|ref|YP_003154465.1| prolyl-tRNA synthetase [Brachybacterium faecium DSM 4810] gi|256559028|gb|ACU84875.1| prolyl-tRNA synthetase, family II [Brachybacterium faecium DSM 4810] Length = 594 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 103/239 (43%), Positives = 142/239 (59%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S F+ L+E+P DAE+ASHKL++R G I + + G+Y+WLPLG K L V I+REEQ Sbjct: 3 RLSSSFIRTLREDPADAEVASHKLLVRAGYIRRSAAGVYTWLPLGLKVLRKVEQIVREEQ 62 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ LQ + + +GR++ YG + RL DR + PTHEE+ T + Sbjct: 63 DAIGGQEVLFSALQPREPYEATGRWEDYGPNLFRLQDRKQDDYLLAPTHEEMFTLTVKDL 122 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R+REFLMKDAYSFD+ EG SY K ++Y Sbjct: 123 FSSYKDLPTMLYQIQAKYRDEARPRAGLLRTREFLMKDAYSFDVDDEGLDASYEKQRLAY 182 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 R F RLGL ++ RA++G +GG S EF+ GE S + + T Sbjct: 183 QRTFERLGLPTVICRADAGAMGGSRSEEFLHPTPVGEDTFVVSDGGYAANVEAVTTPAP 241 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 91/189 (48%), Gaps = 5/189 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ RG+E+GHIF G Y+ + +GK V MG Sbjct: 406 GTIEAAEVRDGDPAPDGSGPMRLTRGMEMGHIFQLGRTYAEALGLKVLDENGKSVVVTMG 465 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R +AAV E HD KG+ WP +AP + ++ D E+I L Sbjct: 466 SYGIGVTRAIAAVAELCHDEKGLCWPRQLAPADVHIVATG-KDPAIFAEAERIAGALEAR 524 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD G +F ++LLG P V+VG + ++ VE++ R G ++S EEV Sbjct: 525 GLEVLYDDRPKVSPGVKFKDSELLGVPTSVVVG-RGLATGVVEVRDRAGGEIREVSPEEV 583 Query: 435 INYASHRFS 443 ++ + Sbjct: 584 VDAVTAEVR 592 >gi|331697398|ref|YP_004333637.1| threonyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190] gi|326952087|gb|AEA25784.1| threonyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190] Length = 682 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 66/433 (15%), Positives = 135/433 (31%), Gaps = 47/433 (10%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + Q G+ + P G + R + G Sbjct: 250 YLERVAEAERRDHRRLGAELDLFS-FPDQIGSGLAVFHPKGGIVRKELEDYSRRRHEQAG 308 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHEEV 113 ++ P + L+ SG + Y + M + + P + + Sbjct: 309 YEFVNTPHITKGQLFRTSGHLEWYEEGMYPGMILDEERDADGNVRKPGQDYYLKPMNCPM 368 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IF + +SYR LP ++ +R E G+ R+R F DA+ + + Sbjct: 369 HNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTEEQMEGE 428 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 + L + GL + + S + + Sbjct: 429 -IASLLQFVLELLRDYGLDDFYLELSTRNPEKS----------------IGSDEAWERAT 471 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 ++ A YA + + D++ ++S +++ Sbjct: 472 NVLRKVAEETGLHLVDDPGGAAFYAPKI---SVQAKDAIGRTWQMSTIQVDL----MLPD 524 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 ++ L +A+ + V + G++ AV+ + G W V I + Sbjct: 525 RFDLEYTAS---DGSRKRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVVGIPVT 581 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 R+ E++ A L + G V D +++ + L P ++VG++ V Sbjct: 582 ------DDQREYVEQVAATLRERGVRVEVDSGDDRMQKKIRTHTLQKVPFMLVVGARDVE 635 Query: 413 DSKVEIKHRLTGI 425 V + R Sbjct: 636 AGAVSFRFRDGTQ 648 >gi|108757584|ref|YP_630572.1| threonyl-tRNA synthetase [Myxococcus xanthus DK 1622] gi|108461464|gb|ABF86649.1| threonyl-tRNA synthetase [Myxococcus xanthus DK 1622] Length = 400 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 75/433 (17%), Positives = 135/433 (31%), Gaps = 44/433 (10%) Query: 17 DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS 76 D +L L + + + G+ W P G + +R+ R G E+ P L + Sbjct: 6 DHRALGQRLDLF--HLQEEAPGMVFWHPRGLVLYRLLEEHVRQRMRREGYQEVRTPQLYA 63 Query: 77 ADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 LW SG +D++ + M + D + + P ++ + SYR+LP + Sbjct: 64 QPLWERSGHWDNFRENMFLVEDGA-RHLGVKPVSCPGHIELVQRMAPSYRDLPLRLGEFG 122 Query: 137 LKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 L R E G+ R R+F D + F P+ S + G + + Sbjct: 123 LVHRAEPGGALHGLFRLRQFTQDDGHIFCAEPQVVPEVVRFAR-SLKDFYAGFGFDDVQV 181 Query: 196 RAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP 255 P E D + + A Sbjct: 182 AFSGRPASRAGRDE-----------------LWDKAESWLLLAAKEAGLQCHMQPGEGAF 224 Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 Y + L D L + +++ + A G M Sbjct: 225 YGPKLEF---VLKDRLGRAWQCGTIQLDLVLP--------ERFDLHYVDASGARVRPVM- 272 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH-DQVCRDACEKIYARLSK 374 R + +E ++ P+ + A + D E+ A+L + Sbjct: 273 -----LHRALLGSLERFIGVMLEHHGGALPPWLAPQQVVVASVGEGAADYAERFAAKLQE 327 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 GC D GE + + A G P V+ G++ V+ V ++ R G + D+ E+ Sbjct: 328 AGCRASVDRRGESLSRKVLDAHAAGVPWLVVAGAREVAAGNVRLRQRD-GAQRDVPWEDA 386 Query: 435 INYASHRFSNNRP 447 ++ RP Sbjct: 387 AA---ELVASCRP 396 >gi|187931393|ref|YP_001891377.1| prolyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica FSC147] gi|226701291|sp|B2SFQ6|SYP_FRATM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|187712302|gb|ACD30599.1| prolyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica FSC147] Length = 565 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 113/333 (33%), Positives = 187/333 (56%), Gaps = 6/333 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+PLG K L + I+R+E Sbjct: 1 MKATQTLIATTKELPKEAVLISHQYMLKAGLIKKLASGIYTWMPLGLKVLQKIQNIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 61 MNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +++YN M+ + Sbjct: 121 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y I ++GL P++A++G IGGD SHEF VLA+ GE + C + D+ E Sbjct: 181 YCNILDKIGLAYRPVKADTGAIGGDNSHEFQVLANAGE-DIICYSNGSDYAANIELATYA 239 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 D ++ + +E+ P T + +++ + + + G+ F + Sbjct: 240 KPDLSKRVNSQNTIEKIHTPNIKTIEKLYKEMSFDIKKTIKTMVIKDAGGNFFALVIRGD 299 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 ++ T + + + A Sbjct: 300 HELNETKINKLDQIIAPYTLATKEEIFSIFNAN 332 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 70/183 (38%), Positives = 103/183 (56%), Gaps = 3/183 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K GIEVGHIF YS PM+A G DGK + MG Y Sbjct: 383 ADIRNVVTGDISPDCKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVG 376 G G RV+AA IE SHD GIIWP+S+AP++++++ I ++ +K+Y L G Sbjct: 443 GFGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKVKEVADKLYQDLLGDG 502 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD G + G FA ADL+G+ V++G K + +E K+R T ++++++ E+I Sbjct: 503 IDVLLDDRGARPGVMFADADLIGYSHHVVIGDKLLEQGLIEYKNRKTQEKQEITIAELIK 562 Query: 437 YAS 439 Sbjct: 563 ILK 565 >gi|254374768|ref|ZP_04990249.1| hypothetical protein FTDG_00943 [Francisella novicida GA99-3548] gi|151572487|gb|EDN38141.1| hypothetical protein FTDG_00943 [Francisella novicida GA99-3548] Length = 565 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 113/333 (33%), Positives = 187/333 (56%), Gaps = 6/333 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+PLG K L + I+R+E Sbjct: 1 MKATQTLIATTKELPKEAVLISHQYMLKAGLIKKLASGIYTWMPLGLKVLQKIQNIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 61 MNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +++YN M+ + Sbjct: 121 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y I ++GL P++A++G IGGD SHEF VLA+ GE + C + D+ E Sbjct: 181 YCNILDKIGLAYRPVKADTGAIGGDNSHEFQVLANAGE-DIICYSNGSDYAANIELATYA 239 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 D ++ + +E+ P T + +++ + + + G+ F + Sbjct: 240 KPDLSKRVNSQNTIEKIHTPNIKTIEKLCKEMSFDIKKTIKTMVIKDAEGNFFALVIRGD 299 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 ++ T + + + A Sbjct: 300 HELNETKINKLEQIVAPYTLATKEEIFSIFNAN 332 Score = 153 bits (386), Expect = 7e-35, Method: Composition-based stats. Identities = 69/183 (37%), Positives = 104/183 (56%), Gaps = 3/183 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K GIEVGHIF YS PM+A G DGK + MG Y Sbjct: 383 ADIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVG 376 G G RV+AA IE SHD GIIWP+S+AP++++++ I ++ +K+Y L G Sbjct: 443 GFGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKVKEVADKLYQDLLGDG 502 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD G + G FA ADL+G+ V++G + + +E K+R T ++++++ E+I Sbjct: 503 IDVLLDDRGARPGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITIAELIK 562 Query: 437 YAS 439 + Sbjct: 563 ILT 565 >gi|118497952|ref|YP_899002.1| prolyl-tRNA synthetase [Francisella tularensis subsp. novicida U112] gi|194323174|ref|ZP_03056958.1| prolyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE] gi|152112922|sp|A0Q7N3|SYP_FRATN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|118423858|gb|ABK90248.1| prolyl-tRNA synthetase [Francisella novicida U112] gi|194322538|gb|EDX20018.1| prolyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE] Length = 565 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 113/333 (33%), Positives = 187/333 (56%), Gaps = 6/333 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+PLG K L + I+R+E Sbjct: 1 MKATQTLIATTKELPKEAVLISHQYMLKAGLIKKLASGIYTWMPLGLKVLQKIQNIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 61 MNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +++YN M+ + Sbjct: 121 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y I ++GL P++A++G IGGD SHEF VLA+ GE + C + D+ E Sbjct: 181 YCNILDKIGLAYRPVKADTGAIGGDNSHEFQVLANAGE-DIICYSNGSDYAANIELATYA 239 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 D ++ + +E+ P T + +++ + + + G+ F + Sbjct: 240 KPDLSKRVNSQNTIEKIHTPNIKTIEKLCKEMSFDIKKTIKTMVIKDAEGNFFALVIRGD 299 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 ++ T + + + A Sbjct: 300 HELNETKINKLEQIVAPYTLATKEEIFSIFNAN 332 Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats. Identities = 69/183 (37%), Positives = 104/183 (56%), Gaps = 3/183 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K GIEVGHIF YS PM+A G DGK + MG Y Sbjct: 383 ADIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVG 376 G G RV+AA IE SHD GIIWP+S+AP++++++ I ++ +K+Y L G Sbjct: 443 GFGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKVKEVADKLYQDLLGDG 502 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD G + G FA ADL+G+ V++G + + +E K+R T ++++++ E+I Sbjct: 503 IDVLLDDRGARPGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITITELIK 562 Query: 437 YAS 439 + Sbjct: 563 ILT 565 >gi|116333948|ref|YP_795475.1| prolyl-tRNA synthetase [Lactobacillus brevis ATCC 367] gi|122269368|sp|Q03QS8|SYP_LACBA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116099295|gb|ABJ64444.1| Prolyl-tRNA synthetase [Lactobacillus brevis ATCC 367] Length = 569 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 105/235 (44%), Positives = 145/235 (61%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P L+E P DAE SH++MLR G I Q + G+Y++LPL + L N+ IIREE Sbjct: 1 MKQSQLLIPTLKEVPNDAEALSHQMMLRAGYIRQVTAGMYAYLPLAFRVLTNIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P + A LW ESGRY++YG + + +R+D I PTHEE T + R Sbjct: 61 MEKINAVEMLMPAVLPASLWQESGRYETYGPNLFKFKNRHDSDFILAPTHEETFTMLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPR+G++R REF+MKDAYSF L+ E YN+M + Sbjct: 121 AIKSYKRLPLVMYQIQPKYRDEDRPRYGLLRGREFIMKDAYSFSLSDEDLDRIYNQMEQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R+GL + + G +GG S EF +A GE + S D+ E Sbjct: 181 YENIFDRIGLNYRAIVGDGGAMGGKDSKEFSAIAPVGEDTIVYSDS-SDYAANLE 234 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 64/189 (33%), Positives = 102/189 (53%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 A +D+ + D P+ V +GIE+GHIF GT+YS + AT G+ V MG Sbjct: 380 AFADLREVQPGDLSPDGSGVLKFTKGIEIGHIFKLGTRYSDALGATVLDEGGRQKPVVMG 439 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+++A+ E D KG++WP ++APF I L+ + ++ +L+ Sbjct: 440 SYGIGVSRLLSAIAEQQADDKGLVWPRNIAPFDIHLVPVNLKKDDQAQLTSELEEQLTAK 499 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G + DD E+ G +FA +DL+G P+++ +G K + VEIK R TG ++ +EV Sbjct: 500 GYRILTDDRKERPGVKFADSDLMGIPVRITIGKK-AGEGIVEIKIRKTGETVEVIKDEVA 558 Query: 436 NYASHRFSN 444 + F + Sbjct: 559 STVEILFKD 567 >gi|25028444|ref|NP_738498.1| prolyl-tRNA synthetase [Corynebacterium efficiens YS-314] gi|259507503|ref|ZP_05750403.1| proline--tRNA ligase [Corynebacterium efficiens YS-314] gi|81846817|sp|Q8FP97|SYP_COREF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|23493729|dbj|BAC18698.1| putative prolyl-tRNA synthetase [Corynebacterium efficiens YS-314] gi|259164888|gb|EEW49442.1| proline--tRNA ligase [Corynebacterium efficiens YS-314] Length = 588 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 100/236 (42%), Positives = 141/236 (59%), Gaps = 1/236 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G I + + G+YSWLPLG +AL N+ ++REE Sbjct: 4 RLSTLFLRTLREDPADAEVPSHKLLVRAGYIRRVAPGVYSWLPLGLRALRNIEQVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ P L + + + R+ YG + RL DR + GPTHEE+ + Sbjct: 64 DAIGGQELLFPGLLPREPYETTQRWTEYGDSLFRLKDRKGADYLLGPTHEEMFASTVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSFD+T G + SY + +Y Sbjct: 124 YSSYKDFPVTLYQIQTKYRDEERPRAGILRGREFVMKDSYSFDMTDAGLEESYARHRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 RIF RLG++ + +A SG +GG S EF+ ++ GE F DF E Sbjct: 184 QRIFDRLGIEYVICKATSGAMGGSASEEFLAVSANGE-DTFVRATDGDFAANVEAV 238 Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 95/192 (49%), Gaps = 6/192 (3%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 + + D PE + ARGIE+GHIF G KY+ +GK MG Sbjct: 399 GFIEAAEIREGDPAPEGQGTLTLARGIEIGHIFQLGRKYTEAFDVQILDENGKRAIPTMG 458 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R++A + E HD G+ W +VAP+++ ++ D +A E+ LS+ Sbjct: 459 SYGIGVSRLLAVLAEQRHDEAGLNWSPAVAPYQVHVVAAN-KDAAAIEAAERYATELSQA 517 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV +DD G +F A+LLG P +I+G + +D VE++ R G + ++ ++E Sbjct: 518 GIDVLFDDRPKVSPGVKFKDAELLGMPFALILG-RGYADGTVELRVRG-GEKTELPVDEA 575 Query: 435 INYASHRFSNNR 446 + + R Sbjct: 576 VETIVRLVNEAR 587 >gi|296129352|ref|YP_003636602.1| prolyl-tRNA synthetase [Cellulomonas flavigena DSM 20109] gi|296021167|gb|ADG74403.1| prolyl-tRNA synthetase [Cellulomonas flavigena DSM 20109] Length = 597 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 105/270 (38%), Positives = 147/270 (54%), Gaps = 6/270 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S F+ L+E+P DAE+ASH+L++R G I + + GIY+WLPLG + L V ++REE Sbjct: 4 RMSTLFVRTLREDPADAEVASHRLLVRAGYIRRAAPGIYTWLPLGLRVLAKVEQVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA E+ P L + + +GR+ YG + RL DR + PTHEE+ T + + Sbjct: 64 AAIGAQEVHFPALLPKEPYEATGRWTEYGPNIFRLKDRKGGDYLLAPTHEEMFTLLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+MKDAYSFD+ G SY +Y Sbjct: 124 YSSYKDLPLALYQIQTKYRDEARPRAGLIRGREFVMKDAYSFDVDDAGLAASYEAQRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF RLGL+ + + A SG +GG S EF+ GE S + + T + Sbjct: 184 QRIFDRLGLEYVIVAATSGAMGGSRSEEFLTPTAIGEDTFVRSAGGYAANVEAVTTVVPE 243 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 V+ P A D + D+L Sbjct: 244 ------PVDASEVPAAHVEDTPDTPTIDTL 267 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 58/203 (28%), Positives = 87/203 (42%), Gaps = 31/203 (15%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ ARGIE+GHIF G KY+ + T +GK V MG Sbjct: 406 GTVEAAEVRAGDPAPDGSGPLELARGIEIGHIFQLGRKYAQALGLTVLDQNGKAQVVTMG 465 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG RV+AA+ E++HD +G+ WP VAP + ++ D +A E + LS Sbjct: 466 SYGIGVTRVLAALAEANHDERGLAWPADVAPAHVHVLATG-KDAAVFEAAEALATTLSAR 524 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKF-------------VSDSKVEIKHR 421 G +V +DD G +FA A ++D VE++ R Sbjct: 525 GVEVLYDDRPKVSPGVKFADA--------------ELLGVPLVVVVGRGLADGVVEVRPR 570 Query: 422 LTGIREDMSLEEVINYASHRFSN 444 G E + + + + Sbjct: 571 AGGTSEQVPVATAADRVAELVDE 593 >gi|195578689|ref|XP_002079196.1| GD23818 [Drosophila simulans] gi|194191205|gb|EDX04781.1| GD23818 [Drosophila simulans] Length = 747 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 74/432 (17%), Positives = 148/432 (34%), Gaps = 40/432 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + I+ E + G E+ Sbjct: 342 EEAAKRDHRKIGREQELF--FFHELSPGSCFFQPRGAHIYNTLMGFIKAEYRKRGFQEVI 399 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + +A LW+ SG ++ Y + M +K P + IF + +S+R LP Sbjct: 400 SPNIYNAKLWMTSGHWEHYAENMFSFEAEKEK-FALKPMNCPGHCLIFDNRNRSWRELPL 458 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + ++ G Sbjct: 459 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEM-KGCLEFLKYVYTIFG 517 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + P E A+ + ++ Sbjct: 518 FSFQLV-LSTRPDNYLGELEQWNDAEK-----------------ALAESLNEFGMPWKEN 559 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + + ++ F +++L A K Sbjct: 560 PGDGAFYGPKIDI---TIMDALKRAHQCATIQLD----FQLPIRFNLSYIA---DDGEKK 609 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + +G++ + A++ + WP ++P ++ ++ + + + Sbjct: 610 RPVIIHRAILGSVERMIAILT---ENFAGKWPFWLSPRQVMVVPVGP---AYDQYAQAVR 663 Query: 370 ARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L G D D G+ + + A L F ++VG K S + V ++ R + + Sbjct: 664 DQLHDAGFMSEADCDAGDTMNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGE 723 Query: 429 MSLEEVINYASH 440 +S+ E+I Sbjct: 724 VSVAELITKLQK 735 >gi|195351005|ref|XP_002042027.1| GM26732 [Drosophila sechellia] gi|194123851|gb|EDW45894.1| GM26732 [Drosophila sechellia] Length = 747 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 74/432 (17%), Positives = 148/432 (34%), Gaps = 40/432 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + I+ E + G E+ Sbjct: 342 EEAAKRDHRKIGREQELF--FFHELSPGSCFFQPRGAHIYNTLMGFIKAEYRKRGFQEVI 399 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + +A LW+ SG ++ Y + M +K P + IF + +S+R LP Sbjct: 400 SPNIYNAKLWMTSGHWEHYAENMFSFEAEKEK-FALKPMNCPGHCLIFDNRNRSWRELPL 458 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + ++ G Sbjct: 459 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEM-KGCLEFLKYVYTIFG 517 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + P E A+ + ++ Sbjct: 518 FSFQLV-LSTRPDNYLGELEQWNDAEK-----------------ALAESLNEFGMPWKEN 559 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + + ++ F +++L A K Sbjct: 560 PGDGAFYGPKIDI---TIMDALKRAHQCATIQLD----FQLPIRFNLSYIA---DDGEKK 609 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + +G++ + A++ + WP ++P ++ ++ + + + Sbjct: 610 RPVIIHRAILGSVERMIAILT---ENFAGKWPFWLSPRQVMVVPVGP---AYDQYAQAVR 663 Query: 370 ARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L G D D G+ + + A L F ++VG K S + V ++ R + + Sbjct: 664 DQLHDAGFMSEADCDAGDTMNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGE 723 Query: 429 MSLEEVINYASH 440 +S+ E+I Sbjct: 724 VSVAELITKLQK 735 >gi|78212568|ref|YP_381347.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Synechococcus sp. CC9605] gi|123756917|sp|Q3AKU0|SYT_SYNSC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|78197027|gb|ABB34792.1| threonyl-tRNA synthetase [Synechococcus sp. CC9605] Length = 611 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 68/427 (15%), Positives = 136/427 (31%), Gaps = 36/427 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD L L + + + G+ W P G + + R+ G + Sbjct: 203 EEALRRDHRRIGKDLDLFS-IEDEAGAGLVFWHPRGARIRLLIEEFWRQAHFEGGYELLY 261 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + LW SG D Y + M + +++ P + + S ++SYR LP Sbjct: 262 TPHVADISLWKTSGHLDFYAESMFGPMEVDEREYQLKPMNCPFHVLTYASKLRSYRELPI 321 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + ++ +R E G+MR R F DA+ F L + S K+ RI Sbjct: 322 RWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDE-ILKILDLTERILSAFD 380 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + + P D + I Sbjct: 381 FSNYEINLSTRPEKS-----------------IGEDAVWDLATKGLIEALERKGWAYKID 423 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 E A Y D+ K+ D++ + S ++ F ++ L A + Sbjct: 424 EGGGAFYGPKIDL---KIEDAIGRMWQCSTIQLD----FNLPERFELDYIAA--DGSKQR 474 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + + R + E+ + E++ Sbjct: 475 PIMIHRAIFGSLERFFGIMTENYAGDYPFWLAPEQVRLLPVT-------DEVQPYAEQLL 527 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +L+K G D G+++G + + P+ ++G+K + V ++ R G Sbjct: 528 DQLTKAGVRATVDRSGDRLGKLIRTGEQMKIPVLAVIGAKEAEQNAVSLRSRRDGDLGVT 587 Query: 430 SLEEVIN 436 ++ ++++ Sbjct: 588 AVSDLLS 594 >gi|300783993|ref|YP_003764284.1| prolyl-tRNA synthetase [Amycolatopsis mediterranei U32] gi|299793507|gb|ADJ43882.1| prolyl-tRNA synthetase [Amycolatopsis mediterranei U32] Length = 582 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 99/221 (44%), Positives = 139/221 (62%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SH+L++R G + + + G YSWLPLG + L + A++REE Sbjct: 4 RTSSLFLRTLREDPADAEVPSHRLLVRAGYVRRVAPGGYSWLPLGLRVLRRIEAVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+ P L + + +GR+ YG + RL DR + GPTHEE+ + Sbjct: 64 NAMGAQEIQFPALLPREPYETTGRWTEYGDGLFRLKDRKGADYLLGPTHEELFALTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+ P T YQIQ K+RDE RPR G++R REF+MKD+YSFDL EG SY +Y Sbjct: 124 YSSYRDYPVTLYQIQTKYRDEARPRAGILRGREFVMKDSYSFDLDDEGLARSYQAHRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 +++F RLGL+ + ++A SG +GG S EF+ +A+TGE Sbjct: 184 VKLFDRLGLEYVVVKATSGAMGGSASEEFLAVAETGEDTYV 224 Score = 156 bits (394), Expect = 8e-36, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 101/189 (53%), Gaps = 4/189 (2%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D+ P+ V+ARGIE+GHIF G KY+ G D K + MG Sbjct: 396 GTIEAAEVREGDASPDGHGTLVAARGIEIGHIFQLGRKYTDAFEVDALGPDSKPIRITMG 455 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R+V + E +HD G+IWP +PF + I I D+ EKI A L Sbjct: 456 SYGVGVSRLVGVLAEQNHDDLGLIWPRVASPFDVH-IVIAGKDETIAAGAEKIAAELDAA 514 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD G +FA A+L+G P ++VG + +++ VE+K R +G RE++++E V+ Sbjct: 515 GVEVILDDRKATPGVKFADAELVGVPTILVVG-RGLANGVVEVKDRRSGEREEIAVEAVV 573 Query: 436 NYASHRFSN 444 + + Sbjct: 574 EHLVKLVRS 582 >gi|229491972|ref|ZP_04385789.1| threonyl-tRNA synthetase [Rhodococcus erythropolis SK121] gi|229321104|gb|EEN86908.1| threonyl-tRNA synthetase [Rhodococcus erythropolis SK121] Length = 649 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 65/451 (14%), Positives = 132/451 (29%), Gaps = 50/451 (11%) Query: 7 FLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L + RD +L L + + G+ + P G + R G Sbjct: 215 YLELLAEAERRDHRKLGTELDLFS-FPDELGSGLPVFHPKGGIIRTEMENYSRSRHIEAG 273 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEV 113 ++ P + L+ SG D Y M + + P + + Sbjct: 274 YEFVNTPHITKGHLYEVSGHLDWYRDGMFPAMHVDEELNEDGTVRKPGQDYYLKPMNCPM 333 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IFR+ +SYR LP ++ +R E G+ R R DA+ + + Sbjct: 334 HNLIFRARGRSYRELPLRLFEFGSVYRYEKSGVIHGLTRVRGMTQDDAHIYCTREQMRDE 393 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 L + GL + + + S D + Sbjct: 394 L-TTTLQFVLNLLKDYGLDDFYLELST----------------KNPDKFVGSDDVWEEAT 436 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y + ++ D+L ++S ++ F Sbjct: 437 ATLAEVGEASGLTLVPDPGGAAFYGPKI---SVQVKDALGRTWQMSTIQLD----FNLPE 489 Query: 293 KYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 ++ + G DG K V + G++ V+ + G W V I + Sbjct: 490 RF----ELEYTGNDGVKTRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPV 545 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + D + +L G D +++ + P ++ G + V Sbjct: 546 A------EAFADHLFDVTKKLKAAGVRAEVDFSDDRMQKKIRNHTTQKVPFMLLAGERDV 599 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 V + R + +++ + + Sbjct: 600 EAGAVSFRFRDGTQINGIPVDDAVRIITEWI 630 >gi|281420278|ref|ZP_06251277.1| threonine--tRNA ligase [Prevotella copri DSM 18205] gi|281405773|gb|EFB36453.1| threonine--tRNA ligase [Prevotella copri DSM 18205] Length = 650 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 75/444 (16%), Positives = 147/444 (33%), Gaps = 36/444 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L + KG+ WLP G + + ++R Sbjct: 232 EYLVILEEAKKRDHRKIGKEMELFM-FSERVGKGLPIWLPKGTQLRLRLQELLRSLLKPY 290 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + L+V SG Y YGK+ + D+ + P + +++ Sbjct: 291 NYQEVICPGIGGKSLYVTSGHYAHYGKDAFQPIQTPEEDEEYMLKPMNCPHHCEVYARKP 350 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + FR E G+ R R F DA+ F + + + + Sbjct: 351 RSYKDLPLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRSDQVKSE-FENVIDVI 409 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L++F G ++ + + S + + + + Sbjct: 410 LKVFKIFGFENYEAQISLHD-------------PKDTEKYIGSDEIWEESENAIREACKE 456 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 A Y D + D++ ++ ++ Sbjct: 457 KGLETREEVGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFKLE 505 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + G++ AV+ G +W + I + Sbjct: 506 YTAEDNSKKTPVMIHRAPFGSLERFTAVLIEHTAGHFPLW------LTPDQVAILPISEK 559 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ L K G DD E+IG + +L P VIVG K ++ V ++ Sbjct: 560 FNDYAQKVRQYLDKQGVRALVDDRNEKIGRKIRDNELKRVPYMVIVGEKESAEGLVSMRK 619 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 + G + MS+EE + + Sbjct: 620 QGGGEQATMSMEEFAQRINAEVAE 643 >gi|134301543|ref|YP_001121511.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis WY96-3418] gi|166980125|sp|A4IWT9|SYP_FRATW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|134049320|gb|ABO46391.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis WY96-3418] Length = 565 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 113/333 (33%), Positives = 187/333 (56%), Gaps = 6/333 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+PLG K L + I+R+E Sbjct: 1 MKATQTLIATTKELPKEAVLISHQYMLKAGLIKKLASGIYTWMPLGLKVLQKIQNIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 61 MNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +++YN M+ + Sbjct: 121 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y I ++GL P++A++G IGGD SHEF VLA+ GE + C + D+ E Sbjct: 181 YCNILDKIGLAYRPVKADTGAIGGDNSHEFQVLANAGE-DIICYSNGSDYAANIELATYA 239 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 D ++ + +E+ P T + +++ + + + G+ F + Sbjct: 240 KPDLSKRVNSQNTIEKIHTPNIKTIEKLCKEMSFDIKKTIKTMVIKDAGGNFFALVIRGD 299 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 ++ T + + + A Sbjct: 300 HELNETKINKLDQIIAPYTLATKEEIFSIFNAN 332 Score = 154 bits (388), Expect = 4e-35, Method: Composition-based stats. Identities = 69/183 (37%), Positives = 103/183 (56%), Gaps = 3/183 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K GIEVGHIF YS PM+A G DGK + MG Y Sbjct: 383 ADIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVG 376 G G RV+AA IE SHD GIIWP+S+AP++++++ I ++ +K+Y L G Sbjct: 443 GFGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKIKEVADKLYQDLLGDG 502 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD G + G FA ADL+G+ V++G + + +E K+R T ++++++ E+I Sbjct: 503 IDVLLDDRGARPGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITIAELIK 562 Query: 437 YAS 439 Sbjct: 563 ILK 565 >gi|242024338|ref|XP_002432585.1| Threonyl-tRNA synthetase, cytoplasmic, putative [Pediculus humanus corporis] gi|212518045|gb|EEB19847.1| Threonyl-tRNA synthetase, cytoplasmic, putative [Pediculus humanus corporis] Length = 717 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 71/439 (16%), Positives = 134/439 (30%), Gaps = 44/439 (10%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + IR E + G E+ Sbjct: 311 EEAAKRDHRKLGREQELY--FFHELSPGSCFFYPKGAFIYNTLVEFIRSEYRKRGFQEVI 368 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + + LW SG + Y + M + P + IF + +S+R LP Sbjct: 369 TPNIYNVKLWETSGHWQHYAENMFSFELEKET-YALKPMNCPGHCLIFDNRNRSWRELPL 427 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+E G+ R R F DA+ F T K + ++ G Sbjct: 428 RMADFGVLHRNEFSGALSGLTRVRRFQQDDAHIFC-TVNQIKSEISGALEFLKNVYGVFG 486 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 F + T + + D D+ + Sbjct: 487 FT------------------FQLRLSTRPEKYLGEINVWDQAEKQLTESLDEFGFPWKLN 528 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + + ++ F ++ + + G G Sbjct: 529 PGDGAFYGPKIDI---TILDALKRAHQCATIQLD----FQLPIRF----NLNYIGESGDK 577 Query: 310 HYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + I R++A + ES + + + +K Sbjct: 578 IRPVIIHRAILGSVERMIAILTESYGGKWPFWLSPRQSIVIPVGLP-------FYEYAKK 630 Query: 368 IYARLSKVGCDVFW-DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + + G + DD G+ + + A L + +VG K + V ++ R + Sbjct: 631 VKDDIFNAGFSCDFDDDEGDTMNKKIRNAQLAQYNFIFVVGEKEKNAGTVNVRTRDNIVH 690 Query: 427 EDMSLEEVINYASHRFSNN 445 + S+ +VI Sbjct: 691 GEFSVGDVIKKFQELKEKR 709 >gi|315635477|ref|ZP_07890743.1| threonine--tRNA ligase [Arcobacter butzleri JV22] gi|315480235|gb|EFU70902.1| threonine--tRNA ligase [Arcobacter butzleri JV22] Length = 602 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 72/443 (16%), Positives = 156/443 (35%), Gaps = 41/443 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + +L+E RD +L L T G+ WLP G + + ++ + G Sbjct: 197 YTRMLEEAKKRDHRKLGTELELFT-FNDDVGAGLPMWLPKGARLRSKLEHLLYKAHRIRG 255 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + A++W SG Y +Y + M +D+ P + IF++++ SY Sbjct: 256 YEPVRGPEILKAEMWKISGHYANYKENM-YFTTIDDQEYGIKPMNCVGHIQIFKNNLVSY 314 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 + LP ++ + R E+ G+ R REF D++ F + + + + Sbjct: 315 KELPKKLFEYGVVHRHEMSGAMHGLFRVREFTQDDSHIFCTQDQIKQVIFEVL------- 367 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 ++ D +E V T + F + D+ Sbjct: 368 ----------EFVDTLLKVFDFKYEIEV--STKPEKAIGDDIFWEKTTKGIMDALDENNI 415 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D++ + +++ F + + Sbjct: 416 SYGIDEGGGAFYGPKIDI---KILDAIGRKWQCGTVQVDMNLPSRF--------NVEYIN 464 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 G+ + +G+ ++ G+ + + + Sbjct: 465 EKGEKEQPVMIHRAILGSFERFIGILTEHCAGEFPFIIAPTQVIFVPIA------DSHVE 518 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ L + D +M E + + +A+ P+ V++G + V + V +++R T Sbjct: 519 YAKELQKALLENDLDSEIYNMNESLNKRIRMAEKQRVPMIVVIGDEEVENKTVALRNRRT 578 Query: 424 GIREDMSLEEVINYASHRFSNNR 446 + +MS E I+ + + +R Sbjct: 579 REQSNMSKNEFISMLNEIKNGSR 601 >gi|284173635|ref|ZP_06387604.1| threonyl-tRNA synthetase [Sulfolobus solfataricus 98/2] gi|261600981|gb|ACX90584.1| threonyl-tRNA synthetase [Sulfolobus solfataricus 98/2] Length = 545 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 75/443 (16%), Positives = 152/443 (34%), Gaps = 39/443 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + D + KL L + + G+ + P GQ + + +RE + G Sbjct: 128 YLTWLEKAEETDHRLIGEKLDLFSFH-EEAGSGLVLFHPKGQTLRNELITFMREINDSMG 186 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ + D+W SG Y Y +++ + + P + I++S ++Y Sbjct: 187 YQEVYTSHVLKTDIWKISGHYTLYRDKLI-VFNMEGDEYGVKPMNCPAHILIYKSKPRTY 245 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F + +R E + +G++R R F+ D + F + + + + Sbjct: 246 RDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIFLKEDQLKEEIKMLISKTVEVW 305 Query: 185 FHR-LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 I + P S E + + + + Sbjct: 306 HKFGFKDDDIKPYLSTRPDESIGSDE-----------------LWEKATNALISALQESG 348 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E+ A Y D ++ DSL ++S ++ F ++ + Sbjct: 349 LKFGIKEKEGAFYGPKIDF---EIRDSLGRWWQLSTIQVD----FNLPERF----KLEYI 397 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG + G++ A++ GK W ++P ++ ++ I Sbjct: 398 DKDGTKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTW---LSPVQVKVLPIT---DEVN 451 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + EK+ + K D GE + + A G P +IVG K S V ++ R Sbjct: 452 EYAEKVLNDMRKRRIRAEIDYAGETLSRRIKNAYDQGVPYILIVGKKEASQGTVTVRARG 511 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 ++ E+ ++ + Sbjct: 512 NIEVRNVKFEKFLDLMITEITQR 534 >gi|225550529|ref|ZP_03771478.1| threonine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225379683|gb|EEH02045.1| threonine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 580 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 157/444 (35%), Gaps = 34/444 (7%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + + RD L L T + +G+ WLP G V I E + + Sbjct: 168 YLVDLQERKERDHRKIGKDLNLFT-FNNLAGQGLPIWLPNGTIIKSQVQKFINEVEFQFN 226 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P L S DL+ SG +D Y + +++ +I P T ++ + ++SY Sbjct: 227 FDTVITPILGSIDLYKTSGHWDHYKDNIFSPVQIDNEVLILRPMTCPHHTLVYSNELRSY 286 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R E G R RE +++D + F + F Sbjct: 287 RSLPIRLSEHSILHRYESSGGLTGFERVREMILEDCHVFCRPDQIEHE-VINAFKMIQEA 345 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK-DFMDFPIPSENTDFDDII 243 LG+K+ + D + + + + + D Sbjct: 346 QEGLGIKTFEIHLSLN--------------DPNDKEKYYDDPQMWEHSQNALRKMLKDHK 391 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y D + + L VS ++ F ++ + ++ Sbjct: 392 IPYKEMVGEAAFYGPKIDFQVKTV---LNRIITVSTIQLD----FLLPNRF----NLSYI 440 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + M IG + ++ + + P ++P ++ +I + + + D Sbjct: 441 NENNEQSTPVMIH--IGIIGTYERLLAILLEQTKGVLPLWLSPVQVVIIPVNEN--LHAD 496 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK-VEIKHRL 422 +++ A+L K D E++ + A + P Q++VG + + + K V + Sbjct: 497 YAKELNAKLRKHLVRSSLDLRNERLSKKIREAQIQKIPYQIVVGDEEIKNDKMVTYRRYG 556 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 + +S+++ I + + + Sbjct: 557 SEETTTVSVDDFIKVLENDIRSKK 580 >gi|168702447|ref|ZP_02734724.1| threonyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246] Length = 620 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 64/446 (14%), Positives = 138/446 (30%), Gaps = 35/446 (7%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + + RD +L L G LP G + I + + R G Sbjct: 198 LARLEEAAKRDHRKVGRELDLFAN--EPVFGSGFPMLLPKGATIRRLLETFITDYERRAG 255 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD-----RNDKAMIYGPTHEEVMTDIFRS 120 + + P + +L+ SG +D Y M D +D+ + P +++S Sbjct: 256 YLHVFTPDIAKKELYKISGHWDHYKDSMFPPMDMGEGGNDDEELCLRPMCCPHHIQVYKS 315 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SYR+LP ++ +R E G + + + + P+ KH + Sbjct: 316 KARSYRDLPIRIAELGNMYRFERSGVVGGLSRVRCMTLNDAHLFVRPDQVKHEIAGVLQL 375 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + + LG+ R + + + + Sbjct: 376 MKKAYADLGITEYRFRLSKNADPDGPPSD----------KYVDNPAMWESSTKMLREVLQ 425 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + A Y DV ++ D + + +S + F Sbjct: 426 ESGMPFFEAWNEAAFYGPKIDV---QVKDVMGREETLSTIQADQHLPAKF--------EL 474 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +K +D M G + + ++ + +P +AP +++++ I Sbjct: 475 EYKDSDDTPKRPVMIHR--GVISTMERMMSYLIELYAGAFPVWLAPVQVAIVPIADRH-- 530 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 +K+ L V D +++ ++ A L P +++G K + + V ++ Sbjct: 531 -FAFAQKLGDELLDKDYRVDVDLGDKRMQAKIRDAQLQKIPYILVIGDKEMEANAVAVRL 589 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R E + + +R Sbjct: 590 RDGTDLGAKPAAEFVAML-EAVAKSR 614 >gi|149499809|ref|XP_001513531.1| PREDICTED: similar to threonyl-tRNA synthetase-like 2, partial [Ornithorhynchus anatinus] Length = 677 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 74/447 (16%), Positives = 152/447 (34%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD + L H S G +LP G + + IREE Sbjct: 260 KMMKTWEKFQEEAKNRDHRKIGKEQELF--FFHDLSPGSCFFLPRGAFLYNTLLDFIREE 317 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ E+ P + ++ LW SG + Y + M D + P + +F Sbjct: 318 YHKRNFTEVVSPNVYNSKLWETSGHWQHYSENMFSF-DVEKETFALKPMNCPGHCLMFAH 376 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R +P + R+EL G+ R R F DA+ F + + + Sbjct: 377 RPRSWREMPIRLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCMMEQIEEEM-KGCLQ 435 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G F + T + D Sbjct: 436 FLQSVYSVFGFS------------------FQLNLSTRPENFLGEIETWDQAEKQLQNSL 477 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + A Y D+ K+ D++ + + ++ F +++L Sbjct: 478 KEFGEPWKLNPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRFNLTYV 530 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + K V + +G++ + A++ + G WP ++P ++ +I + Sbjct: 531 SKESDD--KKRPVIIHRAILGSVERMIAILS---ENYGGKWPFWLSPRQVMVIPVGP--- 582 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C + ++I + + G D D + + A L + ++VG K ++ V + Sbjct: 583 TCEEYAQQIRSEFFEAGFMADVDLDQSSTLNKKIRNAQLAQYNFILVVGEKEKGNNAVNV 642 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R I ++S+ I + Sbjct: 643 RTRDNKIHGEISVNSAIEKLKKLKKSR 669 >gi|332030887|gb|EGI70523.1| Threonyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior] Length = 714 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 74/438 (16%), Positives = 143/438 (32%), Gaps = 42/438 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + IR E + G E+ Sbjct: 309 EEAAKRDHRKIGKEQELY--FFHELSPGSCFFQPRGAYIYNTLVDFIRSEYRKRGFQEVV 366 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + ++ LW SG + Y + M D + P + IF +S+R LP Sbjct: 367 TPNIFNSKLWQTSGHWQHYAENMFSF-DVEKETFALKPMNCPGHCMIFDVRCRSWRELPI 425 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F + R+EL G++R R F DA+ F + N ++ LG Sbjct: 426 RFADFGVLHRNELSGALTGLIRVRRFQQDDAHIFCSIDQIKDE-INGALDFLWHVYSILG 484 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 F + T + + + + S+ Sbjct: 485 FT------------------FSLCLSTRPEKFLGDIKVWNEAEKALEESLNAFGQPWSLN 526 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 + A Y DV + D+L + + ++ F ++ + ++ G+ Sbjct: 527 PEDGAFYGPKIDV---TILDALKRPHQTATIQLD----FQLPIRF----NLSYVNEAGEK 575 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + +G++ + A++ S+ + D ++ Sbjct: 576 TRPIIIHRAILGSVERMIAILTESYG------GKWPYWISPRQAMVVPVASQFDDYAFEV 629 Query: 369 YARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +L G V D D + + + A L F ++VG K + V I+ R + Sbjct: 630 KQKLWDAGVMVEIDIDPSDTLNKKIRNAQLAQFNFILVVGEKERNAGTVNIRTRDNVVHG 689 Query: 428 DMSLEEVINYASHRFSNN 445 +M+++E+I Sbjct: 690 EMAVDELITKLKILKETR 707 >gi|229820980|ref|YP_002882506.1| prolyl-tRNA synthetase [Beutenbergia cavernae DSM 12333] gi|229566893|gb|ACQ80744.1| prolyl-tRNA synthetase [Beutenbergia cavernae DSM 12333] Length = 586 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 106/278 (38%), Positives = 151/278 (54%), Gaps = 2/278 (0%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+ FL L+E+P DAE+ SH+L++R G I + + GIY+WLPLG + L V AI+REE + Sbjct: 1 MSRLFLRTLREDPVDAEVDSHRLLVRAGYIRRAAPGIYTWLPLGLRVLARVEAIVREEMD 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+ P L + + SGR+ +YG+ + RL DR + + PTHEE+ T + + Sbjct: 61 AAGAQEVHFPALLPREPYEASGRWTTYGQGIFRLKDRREGDYLLAPTHEEMFTLLVKDLY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSFD+ + SY+ +Y Sbjct: 121 SSYKDLPLTLYQIQTKYRDEARPRAGLLRGREFIMKDAYSFDVDLARFERSYDAQRHAYQ 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RIF RLGL+ + ++A SG +GG S EF+ GE S + + T + Sbjct: 181 RIFDRLGLEYVIVKASSGLMGGTRSEEFLSPCAIGEDTFVRSPGGYAANVEAVTTPVPEA 240 Query: 243 ISLNSIVEQ--WTAPYAATSDVHNEKLFDSLPENKRVS 278 I P T + P R Sbjct: 241 IPYEDAPPAHVEDTPDTPTIETLVAHANAHQPRADRAW 278 Score = 116 bits (290), Expect = 8e-24, Method: Composition-based stats. Identities = 62/188 (32%), Positives = 96/188 (51%), Gaps = 5/188 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ ARGIE+GHIF GT +S + T +GK MG Sbjct: 395 GTIEAAEVRPGDPAPDGSGPLELARGIEIGHIFDLGTTFSDALGLTVLDENGKAIVPTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R VAA+ E+ HD +G+ WP VAP ++ ++ D V A E A + Sbjct: 455 SYGVGVSRAVAALAETHHDERGLTWPVHVAPAQVHIVATGKDDAVFAAAEELGAAL-TAR 513 Query: 376 GCDVFWDD-MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 DV DD G +FA +LLG P+ V+VG + ++D +E++ R + +RED+ + Sbjct: 514 RIDVLLDDRRKVSAGVKFADGELLGMPVIVVVG-RGLADGTIEVRLRASDLREDVEVARA 572 Query: 435 INYASHRF 442 ++ + Sbjct: 573 ADHVAELV 580 >gi|171920625|ref|ZP_02695822.2| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|188524282|ref|ZP_03004325.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867906|ref|ZP_03079904.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273446|ref|ZP_03205982.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554092|ref|YP_002284982.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|238065120|sp|B5ZC42|SYT_UREU1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|171903344|gb|EDT49633.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|195660016|gb|EDX53396.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660383|gb|EDX53642.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249966|gb|EDY74746.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541593|gb|ACI59822.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] Length = 580 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 157/444 (35%), Gaps = 34/444 (7%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + + RD L L T + +G+ WLP G V I E + + Sbjct: 168 YLVDLQERKERDHRKIGKDLNLFT-FNNLAGQGLPIWLPNGTIIKSQVQKFINEVEFQFN 226 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P L S DL+ SG +D Y + +++ +I P T ++ + ++SY Sbjct: 227 FDTVITPILGSIDLYKTSGHWDHYKDNIFSPVQIDNEVLILRPMTCPHHTLVYSNELRSY 286 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R E G R RE +++D + F + F Sbjct: 287 RSLPIRLSEHSILHRYESSGGLTGFERVREMILEDCHVFCRPDQIEHE-VINAFKMIQEA 345 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK-DFMDFPIPSENTDFDDII 243 LG+K+ + D + + + + + D Sbjct: 346 QEGLGIKTFEIHLSLN--------------DPNDKEKYYDDPQMWEHSQNALRKMLKDHK 391 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y D + + L VS ++ F ++ + ++ Sbjct: 392 IPYKEMVGEAAFYGPKIDFQVKTV---LNRIITVSTIQLD----FLLPNRF----NLSYI 440 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + M IG + ++ + + P ++P ++ +I + + + D Sbjct: 441 NENNEQSTPVMIH--IGIIGTYERLLAILLEQTKGVLPLWLSPVQVVIIPVNEN--LHAD 496 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK-VEIKHRL 422 +++ A+L K D E++ + A + P Q++VG + + + K V + Sbjct: 497 YAKELNAKLRKHLVRSSLDLRNERLSKKIREAQIQKIPYQIVVGDEEIKNDKMVTYRRYG 556 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 + +S+++ I + + + Sbjct: 557 SEETTTVSVDDFIKVLENDIRSKK 580 >gi|159030629|emb|CAO88297.1| thrS [Microcystis aeruginosa PCC 7806] Length = 599 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 73/442 (16%), Positives = 150/442 (33%), Gaps = 39/442 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD +L L G+ W P G + +++EQ + G + + Sbjct: 187 EEALKRDHRKLGKELGLFI-FSDSVGPGLPLWTPKGTLIRSLLEDFLKKEQLKRGYLPVV 245 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKA------MIYGPTHEEVMTDIFRSHIKS 124 P + DL+ SG + Y ++M + ++++ + P + I++S ++S Sbjct: 246 TPHIARVDLFKISGHWQKYKEDMFPMMADDEESASKEIGFVLKPMNCPFHIQIYKSDLRS 305 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR LP + +R E G + D +TPE + + L + Sbjct: 306 YRELPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDKEFLSVVDLILTV 365 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F L LK+ R D + S + + + + Sbjct: 366 FKSLQLKNFKARLS--------------FRDPESDKYIGSDEAWEKAQSAIRKAVQTLGM 411 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y D D+L ++ ++ + Sbjct: 412 DYFEAPGEAAFYGPKLDFI---FQDALEREWQLGTVQVDYNLP--------ERFELEYVA 460 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + G++ + ++ + +P +AP +I L+ + D Sbjct: 461 EDGNRKRPVMIHRAPFGSLERLIGILI---EEYAGDFPLWLAPVQIRLLPV---SDSQLD 514 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ ++ +G D GE++G A+ P+ +VG+K + + + I+ R Sbjct: 515 YAKEVTVKMQLLGIRAETDTSGERLGKMIRNAETAKIPVMAVVGAKEMESNSLSIRTRAA 574 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G +S+EEV+ N+ Sbjct: 575 GDLGVISVEEVVAKLESAIQNH 596 >gi|317495744|ref|ZP_07954109.1| prolyl-tRNA synthetase [Gemella moribillum M424] gi|316914197|gb|EFV35678.1| prolyl-tRNA synthetase [Gemella moribillum M424] Length = 566 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 128/411 (31%), Positives = 187/411 (45%), Gaps = 35/411 (8%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ F+P +E P AE SHKL+++ GM+ Q S G+Y++LPL K + N+ +IREE Sbjct: 1 MRQSRTFIPTTREVPSSAEAISHKLLIKAGMVKQVSAGVYTYLPLATKVIQNIERVIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+E+ +P LQS D W ESGR+ G E++RL DR PT EE++ + Sbjct: 61 HDKIGAVELLMPLLQSEDYWKESGRWYKMGDELMRLKDRKGAGYALSPTAEEIICQTVNN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPR G++R +EF+MKD YSF +PE + +Y + + Sbjct: 121 MLTSYKQLPMNLYQIQTKFRDEMRPRLGLLRGKEFIMKDGYSFHDSPESLRETYLDYYNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--- 237 Y IF R LK ++A+SG IGG +HEF LA+ GE + ++ D+ E Sbjct: 181 YSNIFDRFELKYRAVKADSGNIGGSYTHEFQALAEIGEDTIAYTE-ESDYAANIETAAVV 239 Query: 238 ----------DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL-----PENKRVSARGI 282 + + L + +Q AA V + +L E V RG Sbjct: 240 EQNYTIPSGFEKKERELLETPDQQTIDDIAAYCGVEVNRAMKALALKADGEFYLVLMRGN 299 Query: 283 EV--GHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 + F T S AT + + V G VI + Sbjct: 300 DQLNDIKFMKATGTSEVEMATEQEIEEVMGSVVGYMGPFGI--KNCKVIGDNAIKYMYNH 357 Query: 341 PDSVAPFKISLINIKAHDQVCRDACE-------KIYARLS-----KVGCDV 379 IN+ D + I LS G +V Sbjct: 358 SCGANKKGYHYINVNPGDYEVDAYYDLRMIEEGDIAEDLSGKIKFAKGIEV 408 Score = 152 bits (385), Expect = 7e-35, Method: Composition-based stats. Identities = 71/165 (43%), Positives = 102/165 (61%), Gaps = 1/165 (0%) Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 K A+GIEVG +F G YS M+ T+ A+G+ ++ MG YGIG RV++A+IE + Sbjct: 398 GKIKFAKGIEVGQVFELGKGYSEAMNITYLDANGRANHFYMGCYGIGVSRVISAIIEQHN 457 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 D KGIIWP VAPF++ L+ + Q + EK+YA L+ G V +DD E+ G +F Sbjct: 458 DEKGIIWPKEVAPFQVHLVCVDVKKQEQLELSEKLYAELTSAGYTVLYDDRAERAGVKFN 517 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 ADL+G PLQV+VG K ++ VE+K R T + D S+ EV++ Sbjct: 518 DADLIGIPLQVVVGKK-ATEGIVEVKERKTLEKVDTSITEVLSKV 561 >gi|315930217|gb|EFV09332.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305] Length = 602 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 152/444 (34%), Gaps = 40/444 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y I + RD +L L T + G+ WL G + + ++ + Sbjct: 194 LKEYLTIIEEAKKRDHRKLGTELKLFT-FDDEIGGGLPIWLSNGARLRSKLEHMLYKIHR 252 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P L AD W SG Y +Y + M +++ P + I++S + Sbjct: 253 LRGYEPVRGPELLKADAWKISGHYANYKENM-YFTQIDEQEYGIKPMNCVGHIKIYQSDV 311 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP F++ + R E G+ R REF DA+ F + P K ++ Sbjct: 312 RSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCM-PSQIKEQVLEILAFV 370 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + T + + + + D+ Sbjct: 371 DNLMKLFDFSYEMEI------------------STKPEKAIGDDEIWEIATKALKEALDE 412 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ K+ D+L + ++ F +++ Sbjct: 413 QGLKYGIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVD----FNLPSRF----KLE 461 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +D + + +G+ ++ + + + I + Sbjct: 462 YTDSDNEKKQPVMLHRAILGSFERFIGILTEHC------AGEFPFFIAPTAVGIVPIGEA 515 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++I L ++ D + E + + +A+ P+ +++G V+ V ++ Sbjct: 516 HIDYAKEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRD 575 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R ++++SL+E I + S Sbjct: 576 RRAKEQKNLSLDEFIKLVKEKMSE 599 >gi|294786669|ref|ZP_06751923.1| proline--tRNA ligase [Parascardovia denticolens F0305] gi|294485502|gb|EFG33136.1| proline--tRNA ligase [Parascardovia denticolens F0305] Length = 601 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 107/284 (37%), Positives = 154/284 (54%), Gaps = 2/284 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+++P DA++ S KL++R G I + G+YSWLPLG K L+ + AIIREE Sbjct: 11 RMSTLFLRTLRDDPADADVDSAKLLIRAGYIRKIGPGLYSWLPLGLKVLNKIEAIIREEI 70 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+ P + + + S R++ YG + R DR+ + PTHEE+ T + + Sbjct: 71 NALGAQEVHFPAMMPREPYQMSNRWEEYGDNIFRFKDRHGADYLLAPTHEEMFTLMVKDM 130 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T YQIQ K+RDE RPR G++R R+F+MKDAYSFD+ EG K SY +Y Sbjct: 131 YTSYKDLPVTLYQIQGKYRDEFRPRAGMIRGRQFVMKDAYSFDIDEEGLKKSYLAERAAY 190 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIFHRL + + + A SGP+GG S EF+ GE + + + + T D Sbjct: 191 ERIFHRLAVDYVIVHAVSGPMGGSESEEFLAPLPIGEDTFALAPSGKAWNVEALTTPAMD 250 Query: 242 IISLNSIVEQWTA--PYAATSDVHNEKLFDSLPENKRVSARGIE 283 + + P + T D +L S P + + Sbjct: 251 PVDYSQTPAATVVDTPDSPTIDSLVSQLNASSPREDGRAWAASD 294 Score = 146 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 62/172 (36%), Positives = 89/172 (51%), Gaps = 2/172 (1%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 RG+E+G +F G KYS M +GK V MG YGIG RV++ + E+ Sbjct: 428 GSGPLSFERGVEIGQVFQLGLKYSKAMGLNVLNQNGKAVPVWMGCYGIGVSRVMSCIAEA 487 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGS 390 HD KG+IWP SVAP ++ LI DQ D E + L K +V +DD G Sbjct: 488 HHDDKGLIWPLSVAPAQVHLIATG-KDQKAYDLAESLLGDLEKADVEVLYDDRAKMSPGV 546 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 +F ++LLG P+ V+VG +SD VEI++R TG ++ + L++ Sbjct: 547 KFKDSELLGLPMIVVVGRDTLSDGTVEIRNRATGEKDVVPLDQAAQAVQDLL 598 >gi|15896426|ref|NP_349775.1| prolyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] gi|81854743|sp|Q97ED5|SYP_CLOAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|15026247|gb|AAK81115.1|AE007813_2 Prolyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] gi|325510583|gb|ADZ22219.1| prolyl-tRNA synthetase [Clostridium acetobutylicum EA 2018] Length = 570 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 119/263 (45%), Positives = 163/263 (61%), Gaps = 2/263 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+E+P +AEI SHKLMLR+GMI + + G+Y+++PLG KAL V IIREE Sbjct: 1 MKMSNMLMLTLRESPAEAEIESHKLMLRSGMIRKMASGVYNYMPLGLKALKKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA E L ++LW ESGR++ +G EM +L DRN++ GPTHEEV TD RS Sbjct: 61 MNAAGAQEFLASALLPSELWKESGRWEVFGPEMFKLKDRNEREFCLGPTHEEVFTDFARS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPRFG++RSREF+MKDAYSFD EG SYNKM+ + Sbjct: 121 EIKSYKQLPVNLYQIQTKYRDERRPRFGMIRSREFVMKDAYSFDKDNEGLDVSYNKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R + + A+SG +GG S EF+V ++ GE ++ + + Sbjct: 181 YTKIFKRCNVSCSAVAADSGAMGGSGSAEFMVKSEIGEDEIAFCTECNYAANIEKAPAVP 240 Query: 241 DIISLNSIVE--QWTAPYAATSD 261 + + E + P+A T + Sbjct: 241 EKADKEELGELKKVETPHAKTIE 263 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 74/209 (35%), Positives = 106/209 (50%), Gaps = 3/209 (1%) Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSL 296 ++ + D N + P+ ARGIEVGHIF GTKYS Sbjct: 358 ANETGYHYANANYDRDFKGTVGDFRNAVEGEKCPKCGKPLTIARGIEVGHIFKLGTKYSE 417 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 M A F +G+ + MG YGIG R ++AV+E HD GI+WP SVAP+++ ++ Sbjct: 418 AMKAYFVDENGESKPLIMGCYGIGVNRTMSAVVEQHHDDNGIVWPLSVAPYEVIVVPAVF 477 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + EK+Y L K+G D DD E+ G +F ADL+G P+++ VG K +S+ KV Sbjct: 478 KSEEQMKEAEKLYTELKKIGVDALLDDRNERAGVKFKDADLIGIPMRITVGKK-ISEGKV 536 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 E K R + E + L++VI F N Sbjct: 537 EFKCRNSEEVEVIDLDKVIARVEEEFEKN 565 >gi|308176793|ref|YP_003916199.1| proline--tRNA ligase [Arthrobacter arilaitensis Re117] gi|307744256|emb|CBT75228.1| proline--tRNA ligase [Arthrobacter arilaitensis Re117] Length = 595 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 108/279 (38%), Positives = 153/279 (54%), Gaps = 2/279 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + S FL L+E+P DAE+ASHKL++R G I + + GIY+WLPLG K L V AI+REE Sbjct: 4 KLSTTFLRTLREDPVDAEVASHKLLVRAGYIRRAAPGIYTWLPLGLKVLARVEAIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+ P L + + ++GR+ YG + RL DR D + PTHEE+ T + + Sbjct: 64 NAIGAQEVHFPALLPREPYEQTGRWAEYGDGLFRLKDRKDADYLLAPTHEEMFTLLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSF++ EG +Y +Y Sbjct: 124 YNSYKDLPVYLYQIQNKYRDEARPRAGLLRGREFIMKDSYSFNIDDEGLDEAYMAHRGAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L+IF RLGL+ +P+ A++G +GG S EF+ GE S + + T + Sbjct: 184 LKIFERLGLEVVPVFAQAGAMGGSKSEEFLHPTAIGEDTFVRSPGGYAANVEAVTTVVPE 243 Query: 242 II--SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS 278 I + E P T + P Sbjct: 244 AIEYTNAPAFEVLDTPDTPTIETLVAAANSLRPRESGAW 282 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 5/185 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + N D P+ + RGIE+GHIF G KY+ ++ +GK V MG Sbjct: 412 GTIESVNVVAGDPAPDGSGPLRTERGIEMGHIFQLGRKYAEALNLKVLDQNGKQTVVTMG 471 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R VAA+ E+ HD G+ WP VAP I I + +A EK+ + Sbjct: 472 SYGIGVTRAVAALAEAYHDENGLAWPKQVAPADIH-IVVTGKGPELLEAAEKLAGQFEAA 530 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD G +F+ A+L+G P V+VG + ++D VE+K R TG R D+++E V Sbjct: 531 GKEVILDDRPKVSAGVKFSDAELIGIPTIVVVG-RGLADGVVEVKDRATGERRDVNVENV 589 Query: 435 INYAS 439 + + Sbjct: 590 VAELT 594 >gi|318056620|ref|ZP_07975343.1| prolyl-tRNA synthetase [Streptomyces sp. SA3_actG] gi|318080757|ref|ZP_07988089.1| prolyl-tRNA synthetase [Streptomyces sp. SA3_actF] Length = 563 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 111/269 (41%), Positives = 155/269 (57%), Gaps = 4/269 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE SHKL++R G + + + GI+SWLPLG+K LDN++ I+REE Sbjct: 6 RMSRLMVKTLRDDPADAETLSHKLLVRAGYVRRTAAGIWSWLPLGKKVLDNISQIVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + SGR++ YG + RL DR + GPTHEE+ T + + Sbjct: 66 DAIGAQEVLLPALLPREPYEASGRWEEYGDLLFRLKDRKGADYLLGPTHEEIFTQVVKDQ 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQ+Q K+RDE RPR GV+R REF+MKD+YSFD T EG SY +Y Sbjct: 126 CTSYKDLPVMLYQVQTKYRDEARPRSGVLRGREFVMKDSYSFDTTEEGLAESYALHREAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF-- 239 +IF RLGL + A SG +GG S EF+ A GE F F +E F Sbjct: 186 RKIFARLGLDYRIVSAVSGAMGGSASEEFLAPAAAGE-DTFADCPNCGFAANTEAVTFKG 244 Query: 240 -DDIISLNSIVEQWTAPYAATSDVHNEKL 267 + S + VE+ P T + E L Sbjct: 245 AEVDGSAHGPVEELDTPDTPTIESLAEHL 273 Score = 137 bits (345), Expect = 4e-30, Method: Composition-based stats. Identities = 63/177 (35%), Positives = 89/177 (50%), Gaps = 6/177 (3%) Query: 266 KLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 + D P + R IE+GHIF G KY+ G +GK V MGSYGIG R Sbjct: 389 EEGDPCPNCGQGLHLDRAIEIGHIFQLGRKYADTFQLDVLGQNGKPVRVTMGSYGIGVSR 448 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 VAA+ E + D KG+ WP V+P + + A + + +I +L+ G V DD Sbjct: 449 AVAALAEQTADDKGLCWPAEVSPADVH--VVAAGKVLQTELALEIADKLAAAGARVLVDD 506 Query: 384 M-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 G G +F A+L+G P VI G + VE+K R TG RE++S+EE + + Sbjct: 507 RAGVSPGVKFTDAELIGVPKTVIAGRRSAE-GIVELKDRRTGEREELSVEEAVARLT 562 >gi|170782218|ref|YP_001710551.1| prolyl-tRNA synthetase [Clavibacter michiganensis subsp. sepedonicus] gi|189083492|sp|B0RDZ1|SYP_CLAMS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|169156787|emb|CAQ01950.1| prolyl tRNA synthetase [Clavibacter michiganensis subsp. sepedonicus] Length = 590 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 109/284 (38%), Positives = 153/284 (53%), Gaps = 2/284 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R SK F+ L+E+P DAE+ASH+L++R G I + + GI++WLPLG + + V AI+REE Sbjct: 4 RLSKLFVRTLREDPVDAEVASHRLLVRAGYIRRQAPGIFAWLPLGLRVKNKVEAIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 R GA E+ P L A+ + +GRYD YG M RL DR M+ PTHEE + + Sbjct: 64 ERIGAQEVHFPALLPAEPYQATGRYDEYGPGMFRLEDRKRAPMVLAPTHEEFFALLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP + YQIQ K+RDE RPR G++R REF MKDAYSFD T G SY +Y Sbjct: 124 YSSYKDLPLSIYQIQDKYRDEARPRAGILRGREFTMKDAYSFDHTDAGLAVSYQAQRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF RLGL+ + + A++G +GG S EF+ GE S + + T + Sbjct: 184 ERIFQRLGLEYVIVAADAGAMGGSKSEEFLHPTPIGEDTFVRSPGGYAANVEAFTTLVPE 243 Query: 242 IISLNSI--VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 I + + +P T + P + + Sbjct: 244 SIPIEGQPAARVFDSPDTPTIQTLVDLANAREPREDGRAWTAAD 287 Score = 122 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 59/180 (32%), Positives = 91/180 (50%), Gaps = 5/180 (2%) Query: 258 ATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 + + + D P+ + RG E+GH+F G KY+ + +GK V MG Sbjct: 405 GVVEAADVRDGDPAPDGSGPISTARGTEIGHVFELGRKYAEALGLKVLDENGKLVTVTMG 464 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R +A V E++ DG+G++WP S++PF + + + D A E++ L Sbjct: 465 SYGIGITRNLALVAEATQDGRGLLWPASISPFDVH-VVMTGKDPAVGTAAEELVDALDAA 523 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV +DD G +F A+L+G P VIVG + D E+ R T R ++L +V Sbjct: 524 GLDVLFDDRPKVSPGVKFGDAELIGVPTVVIVG-RGAVDGMAELWDRRTNERTPVALADV 582 >gi|332678669|gb|AEE87798.1| Prolyl-tRNA synthetase Bacterial type [Francisella cf. novicida Fx1] Length = 565 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 113/333 (33%), Positives = 187/333 (56%), Gaps = 6/333 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+PLG K L + I+R+E Sbjct: 1 MKATQTLIATTKELPKEAVLISHQYMLKAGLIKKLASGIYTWMPLGLKVLQKIQNIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 61 MNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +++YN M+ + Sbjct: 121 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y I ++GL P++A++G IGGD SHEF VLA+ GE + C + D+ E Sbjct: 181 YCNILDKIGLAYRPVKADTGAIGGDNSHEFQVLANAGE-DIICYSNGSDYAANIELATYA 239 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 D ++ + +E+ P T + +++ + + + G+ F + Sbjct: 240 KPDLSKRVNSQNTIEKIHTPNIKTIEKLCKEMSFDIKKTIKTMVIKDAEGNFFALVIRGD 299 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 ++ T + + + A Sbjct: 300 HELNETKINKLEQIVAPYTLATKEEIFSIFNAN 332 Score = 154 bits (389), Expect = 3e-35, Method: Composition-based stats. Identities = 69/183 (37%), Positives = 103/183 (56%), Gaps = 3/183 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K GIEVGHIF YS PM+A G DGK + MG Y Sbjct: 383 ADIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVG 376 G G RV+AA IE SHD GIIWP+S+AP++++++ I ++ +K+Y L G Sbjct: 443 GFGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKVKEVADKLYQDLLGDG 502 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD G + G FA ADL+G+ V++G + + +E K+R T ++++++ E+I Sbjct: 503 IDVLLDDRGARPGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITIAELIK 562 Query: 437 YAS 439 Sbjct: 563 ILK 565 >gi|172040525|ref|YP_001800239.1| prolyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109] gi|226699134|sp|B1VGB6|SYP_CORU7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|171851829|emb|CAQ04805.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 592 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 98/236 (41%), Positives = 141/236 (59%), Gaps = 1/236 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+++P DAE+ASHKL++R G I + + G+YSWLP+G + L V ++R E Sbjct: 4 RMSSLFLHTLRDDPADAELASHKLLVRAGYIRRVAPGVYSWLPMGLRVLRKVENVVRREM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ P L + + + R+D YG E+ RL DR + + GPTHEE+ T + + Sbjct: 64 DAIGGQELMFPALLPKEPYEVTRRWDEYGPELFRLKDRKEADYLLGPTHEELFTWLVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SY++ P YQIQ K+RDE RPR G++R REF+MKD+YSF++T EG SY +Y Sbjct: 124 LNSYKDFPKVLYQIQTKYRDEARPRAGILRGREFVMKDSYSFNMTDEGLDESYRLHRKAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 RIF LG++ + A SG +GG S EF+ +A GE F D+ E Sbjct: 184 QRIFDALGIEYVICYATSGAMGGSASEEFLAVAADGE-DTFVRSTESDYAANVEAV 238 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 60/184 (32%), Positives = 95/184 (51%), Gaps = 5/184 (2%) Query: 260 SDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 + + D P+ K V RGIE+GHIF G KY+ +G+ MGSY Sbjct: 407 VEAAEVREGDPSPDGKGVLTLSRGIEIGHIFQLGRKYTEAFDVQILDENGRRTVPTMGSY 466 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R++A V E HD KG+ WP S+AP+ + + I D+ +A ++ LS G Sbjct: 467 GIGVSRLLAVVAEQMHDEKGLRWPRSIAPYDVH-VVIANKDEAAGEAARELAEALSDAGL 525 Query: 378 DVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V +DD G +F ++LLG P V+VG + ++ KVE++ RL R ++ + ++ Sbjct: 526 EVLFDDRPKVSPGVKFKDSELLGMPQVVVVG-RGFAEGKVELRDRLNDERSEIDYADAVD 584 Query: 437 YASH 440 + Sbjct: 585 VITK 588 >gi|324998197|ref|ZP_08119309.1| prolyl-tRNA synthetase [Pseudonocardia sp. P1] Length = 577 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 123/385 (31%), Positives = 175/385 (45%), Gaps = 29/385 (7%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S FL L+E+P DAE+ SHKL++R G + + + G+YSWLPLG K L + ++REE + Sbjct: 1 MSSLFLRTLREDPADAEVPSHKLLVRAGYVRRVAPGVYSWLPLGLKVLRRIENVVREEMD 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P L + + + R+ YG + R+ DR + GPTHEE+ T + Sbjct: 61 AMGGQEIQFPALLPREPYEATNRWTEYGPALFRIQDRKGGDYLLGPTHEELFTLAVKGEY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++ P YQIQ K+RDE RPR G++R REFLMKD+YSFDL+ EG SY K +Y+ Sbjct: 121 SSYKDYPVVLYQIQTKYRDEERPRAGILRGREFLMKDSYSFDLSDEGLSESYGKHRDTYI 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RIF RL LK + + A SG +GG S EF+ ++TGE +T Sbjct: 181 RIFDRLALKYVIVAATSGAMGGSASEEFLAESETGE-----------------DTFVRGP 223 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + VE T P + D LP + I T + TF Sbjct: 224 GGYAANVEAVTTPAPPAIPL------DGLPAA--QVHHTPDTPTIETLVTYLNEHTDRTF 275 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 AD + + GA R + D + + A + ++ D Sbjct: 276 TAADTLKNVLVKTRQP-GAERWELVGVGVPGDREVDMKRLEAALEPAQVELLEEADFARN 334 Query: 363 DACEKIY---ARLSKVGCDVFWDDM 384 K Y A L+ G D Sbjct: 335 AFLVKGYIGPAALAANGVRYLVDPR 359 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 67/184 (36%), Positives = 97/184 (52%), Gaps = 4/184 (2%) Query: 258 ATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ V +ARGIE+GHIF G KY+ S G D K + MG Sbjct: 390 GTIEAAEVRAGDPSPDGDGVLEAARGIEIGHIFQLGRKYADAFSLDALGPDSKPVRITMG 449 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VAA+ E HD G++WP SVAPF + ++ + E + A L Sbjct: 450 SYGIGVSRLVAAIAEQCHDDSGLVWPRSVAPFDVHVVVAG-KSAELLEGGEVLAAELEAE 508 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G V DD G +FA A+L+G P V+VG + ++D K+E+K R TG R ++ + Sbjct: 509 GLSVILDDRKASPGVKFADAELVGVPTIVVVG-RGLADGKIELKDRATGERTEIPRDGAA 567 Query: 436 NYAS 439 + + Sbjct: 568 AHVA 571 >gi|291404015|ref|XP_002718268.1| PREDICTED: threonyl-tRNA synthetase-like 2-like [Oryctolagus cuniculus] Length = 709 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 75/443 (16%), Positives = 154/443 (34%), Gaps = 40/443 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + + +E RD + L H S G +LP G + +IREE Sbjct: 292 KMMKTWEQVQEEAKNRDHRKIGKEQELF--FFHDVSPGSCFFLPRGAFVYSTLMDLIREE 349 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ +E+ P + ++ LW SG + Y + M + P + +F Sbjct: 350 YHKRDFLEVLSPNVYNSKLWETSGHWQHYSENMFTFRVEKET-FALKPMNCPGHCLMFAH 408 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R +P F + R+EL G+ R R F DA+ F + + Sbjct: 409 RPRSWREMPVRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQ-IEEEIKGCLQ 467 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E A+ Sbjct: 468 FLQSVYSTFGFTFQLN-LSTRPENFLGESEMWAEAEK-----------------QLQNSL 509 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + A Y D+ K+ D++ + + ++ F +++L Sbjct: 510 VEFGKPWKLNPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRFNLTYV 562 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K V + +G++ + A++ + G WP ++P ++ +I + Sbjct: 563 SK--DGDDKKRPVIIHRATLGSVERMVAILS---ENCGGKWPLWLSPRQVMVIPVGP--- 614 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C ++Y + G D D + + A L + ++VG K ++++ V + Sbjct: 615 TCEKYALQVYNEFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEMANNAVNV 674 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + R I ++S+ I + Sbjct: 675 RTRDNKIHGEISVISAIEKLKNL 697 >gi|289705559|ref|ZP_06501951.1| threonine--tRNA ligase [Micrococcus luteus SK58] gi|289557788|gb|EFD51087.1| threonine--tRNA ligase [Micrococcus luteus SK58] Length = 672 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 67/456 (14%), Positives = 129/456 (28%), Gaps = 49/456 (10%) Query: 5 KYFLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L + RD +L L + + G+ + P G + R Sbjct: 247 KAYQERLAEAERRDHRKLGAELDLFS-FPDELGSGLPVFHPRGGIIRKEMEDYSRRRHTE 305 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD-------------RNDKAMIYGPTH 110 G + P + L+ SG D Y M R + P + Sbjct: 306 AGYEFVYTPHITKQHLYEVSGHLDWYADGMFPPMHIDEVRDPETGEITRQGQNYYLKPMN 365 Query: 111 EEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEG 169 + I+RS +SYR LP ++ +R E G+ R R DA+ + + Sbjct: 366 CPMHNLIYRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTREQM 425 Query: 170 SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMD 229 + L + GL + + + S + + Sbjct: 426 KEEL-TTTLNFVLDLLKDYGLNDFYLELST----------------KDPEKFVGSDEIWE 468 Query: 230 FPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY 289 + + A Y + + D++ ++S ++ F Sbjct: 469 EATRTLAEVAEASGLQLVPDPGGAAFYGPKI---SVQARDAIGRTWQMSTIQLD----FN 521 Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 ++ L A + V + G++ V+ + G W I Sbjct: 522 LPERFDLEYQAA---DGTRQRPVMIHRALFGSIERFLGVLTEHYAGAFPAWLAPEQVVAI 578 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 + + D + + A+L G DD ++ + A P +I G + Sbjct: 579 PVA------EAFNDYLDDVVAKLRAEGIRARLDDSSDRFPKKIRTAAKEKAPFVLIAGGE 632 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 + V + R + +EE I Sbjct: 633 DREANAVSFRFRDGTQDNGVPVEEAIERIVKAVRER 668 >gi|148273336|ref|YP_001222897.1| prolyl-tRNA synthetase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|166980116|sp|A5CSZ7|SYP_CLAM3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|147831266|emb|CAN02222.1| proS [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 590 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 106/245 (43%), Positives = 145/245 (59%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R SK F+ L+E+P DAE+ASH+L++R G I + + GI++WLPLG + + V AI+REE Sbjct: 4 RLSKLFVRTLREDPVDAEVASHRLLVRAGYIRRQAPGIFAWLPLGLRVKNKVEAIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 R GA E+ P L A+ + +GRYD YG M RL DR M+ PTHEE + + Sbjct: 64 ERIGAQEVHFPALLPAEPYQATGRYDEYGPGMFRLEDRKRAPMVLAPTHEEFFALLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP + YQIQ K+RDE RPR G++R REF MKDAYSFD T G SY +Y Sbjct: 124 YSSYKDLPLSIYQIQDKYRDEARPRAGILRGREFTMKDAYSFDHTDAGLAVSYQAQRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF RLGL+ + + A++G +GG S EF+ GE S + + T + Sbjct: 184 ERIFQRLGLEYVIVAADAGAMGGSKSEEFLHPTPIGEDTFVRSPGGYAANVEAFTTLVPE 243 Query: 242 IISLN 246 I + Sbjct: 244 SIPIE 248 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 59/181 (32%), Positives = 94/181 (51%), Gaps = 5/181 (2%) Query: 258 ATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 + + + D P+ + RG E+GH+F G KY+ + +GK V MG Sbjct: 405 GVVEAADVRDGDPAPDGSGPITAGRGTEIGHVFELGRKYAEALGLKVLDENGKLVTVTMG 464 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R +A V E++ DG+G++WP S++PF + ++ D++ A E++ L Sbjct: 465 SYGIGITRNLALVAEATQDGRGLLWPASISPFDVHVVMTGKGDEIAS-ASEELVDALDAA 523 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV +DD G +F A+L+G P VIVG + D E+ R T R ++L +V Sbjct: 524 GLDVLFDDRPKVSPGVKFGDAELIGVPTIVIVG-RGAVDGMAELWDRRTNERTPVALADV 582 Query: 435 I 435 + Sbjct: 583 V 583 >gi|116327681|ref|YP_797401.1| prolyl-tRNA synthetase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|122284523|sp|Q053M7|SYP_LEPBL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116120425|gb|ABJ78468.1| Prolyl-tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 576 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 115/239 (48%), Positives = 158/239 (66%), Gaps = 1/239 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SKY LP +ENP DA +ASH+LM+R G+ + S G+Y +LPLG K L + IIREE Sbjct: 1 MKASKYILPTEKENPSDAVVASHRLMIRAGLARKSSAGLYFYLPLGLKILQKIKQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+TGA+E +P L +D W +SGR+ + GKEM R+ DR+D + GPTHEE + + + Sbjct: 61 MNKTGALEFDLPILTPSDFWEQSGRWTAMGKEMFRIKDRHDLSYALGPTHEESFSFLLKP 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP YQIQ KFRDE+RPRFGV+RSREF+MKDAYSF + +Y M + Sbjct: 121 LLKSYKDLPLNVYQIQTKFRDEIRPRFGVIRSREFIMKDAYSFHIDDVSLDETYQSMRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y +IF R GLK+IP++A+SG +GG S EF+V++ GE + + SE T Sbjct: 181 YRKIFDRCGLKTIPVQADSGSMGGSASEEFMVVSPIGEETLLLCNSC-GYSSNSEKTPL 238 Score = 136 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 72/261 (27%), Positives = 115/261 (44%), Gaps = 11/261 (4%) Query: 198 ESGPIGGDLSHE------FIVLADTGETQVFCSKDFMDFPIP-SENTDFDDIISLNSIVE 250 +S P+ E FI + + P ++ +D + ++E Sbjct: 313 DSEPMTDAEIRELGLVPGFIAPVAPNDKVKVLYDRSLQKDFPYVVASNKEDFHTQGFVLE 372 Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + + +DV + D P + +GIEVGHIF G KY+ +GK Sbjct: 373 KEVSGLPEFADVALAREGDLCPNCNAPLKAEKGIEVGHIFKLGEKYTKAFGIQVLDQNGK 432 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + MG YGIG R +A VIE +D KGI WP S+APF+++L++I + E+ Sbjct: 433 ARTLTMGCYGIGVNRTMATVIEQRNDEKGIFWPISIAPFEVTLVSITKG-EEQYSKAEEF 491 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 Y L +VFWDD G + ++L+GFP++V +G KF + ++ I +R E Sbjct: 492 YNVLKNENLEVFWDDRDVGPGFKLKDSELIGFPIRVTIGKKFFENGEISIYNRKADKEES 551 Query: 429 MSLEEVINYASHRFSNNRPVL 449 N + R + R L Sbjct: 552 FVFAGFENLIA-RVESLRQEL 571 >gi|24215989|ref|NP_713470.1| prolyl-tRNA synthetase [Leptospira interrogans serovar Lai str. 56601] gi|81846319|sp|Q8F148|SYP_LEPIN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|24197213|gb|AAN50488.1|AE011490_3 prolyl-tRNA synthetase [Leptospira interrogans serovar Lai str. 56601] Length = 576 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 115/239 (48%), Positives = 159/239 (66%), Gaps = 1/239 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SKY LP +ENP DA +ASH+LM+R G++ + S G+Y +LPLG K L + I+REE Sbjct: 1 MKASKYILPTEKENPADAVVASHRLMIRAGLVRKSSAGLYFYLPLGLKVLKKIEQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N TGA+E +P L +D W +SGR+ + GKEM R+ DR+D + GPTHEE + + + Sbjct: 61 MNSTGALEFDLPILTPSDFWEQSGRWSAMGKEMFRIQDRHDLSYALGPTHEESFSFLLKP 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP YQIQ KFRDE+RPRFGV+RSREF+MKDAYSF + +Y M V+ Sbjct: 121 LLKSYKDLPVNVYQIQTKFRDEIRPRFGVIRSREFIMKDAYSFHIDDSSLDDTYQAMRVA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y +IF R GLK+IP++A+SG +GG S EF+V++ GE + + SE T Sbjct: 181 YRKIFDRCGLKTIPVQADSGSMGGSASEEFMVVSPIGEETLLLCNSC-GYSSNSEKTPL 238 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 113/256 (44%), Gaps = 13/256 (5%) Query: 197 AESGPIGGDLSHE------FIVLADTGETQVFCSKDFMDFPIP-SENTDFDDIISLNSIV 249 A+S P+ E FI + + P + +D + I+ Sbjct: 312 ADSEPMTDLEIRELGLIPGFISPIAPNDKIKVLYDRSLQKDFPYVVGSSKEDFHTQGFIL 371 Query: 250 EQWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 E+ + +DV + D P + +GIEVGHIF G KY+ +G Sbjct: 372 EKEISGLPEFADVALAREGDLCPNCSFPLKAEKGIEVGHIFKLGDKYTKAFGIQVLDQNG 431 Query: 308 KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 K + MG YGIG R +A VIE +D KGI WP S+APF++SL++I + E+ Sbjct: 432 KSKTLTMGCYGIGVNRTMATVIEQCNDEKGIFWPISIAPFEVSLVSIVKGEDQYFKI-EE 490 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 Y L G +VFWDD G + ++L+GFP+++ +G KF ++ I +R + Sbjct: 491 FYNVLMNEGIEVFWDDRDLGPGFKLKDSELIGFPIRITIGKKFFESGEISIYNRKKDQED 550 Query: 428 DM---SLEEVINYASH 440 ++++ Sbjct: 551 SFVFSGFDDLVARVES 566 >gi|187932904|ref|YP_001884583.1| threonyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B] gi|238691610|sp|B2TIT5|SYT_CLOBB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|187721057|gb|ACD22278.1| threonine--tRNA ligase [Clostridium botulinum B str. Eklund 17B] Length = 643 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 76/445 (17%), Positives = 152/445 (34%), Gaps = 35/445 (7%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L T +G+ +P G K + + + +E+ R Sbjct: 228 EYLDAVEEAKKRDHNKLGRELKLFTT-DENVGQGLPLLMPKGAKIVQTLQRWVEDEEERR 286 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA--MIYGPTHEEVMTDIFRSHI 122 G + P + +DL+ SG +D Y M L D P I+ + Sbjct: 287 GYVLTKTPLMAKSDLYKISGHWDHYKDGMFVLGDEEKDEEVFALRPMTCPFQYTIYNAEQ 346 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+LP + + FR+E G++R R+F +TPE + + + Sbjct: 347 HSYRDLPIRYGETSTLFRNESSGEMHGLIRVRQFT-LADGHLIVTPEQLEEEFKGVLELI 405 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + LG I D+S+ F + + + + T D Sbjct: 406 QYLMKTLG------------IDEDISYRFSKWDPNNTEKYINDPEAWNKTQDTMRTILDH 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + A Y D+ + + + I+ + + Sbjct: 454 LKINYVEADDEAAFYGPKLDLQCRNVH---GKEDTLFTVQIDFAL--------AERFDMS 502 Query: 302 FKGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +G+ + IG A++ + +P ++P ++ ++ I Sbjct: 503 YIDKNGEKKRPYIIHRSSIGCYERTLAMLI---EKYAGAFPTWLSPVQVKVLPISDK--- 556 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D E + L G + D E+IG + A L P ++VG K ++++V ++ Sbjct: 557 YNDYAESVVKSLRNKGVRIEADYRAEKIGYKIREARLERTPYILVVGEKEAANNEVSVRS 616 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R + L+ + + Sbjct: 617 RKNDDEGAIKLDAFTERLLNEIATK 641 >gi|86151198|ref|ZP_01069413.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94] gi|85841545|gb|EAQ58792.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94] Length = 602 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 72/444 (16%), Positives = 149/444 (33%), Gaps = 40/444 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y I + RD +L L T + G+ WL G + + ++ + Sbjct: 194 LKEYLTIIEEAKKRDHRKLGTELKLFT-FDDEIGGGLPIWLSNGARLRSKLEHMLYKIHR 252 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P L AD W SG Y +Y + M +++ P + I++S + Sbjct: 253 LRGYEPVRGPELLKADAWKISGHYANYKENM-YFTQIDEQEYGIKPMNCVGHIKIYQSDV 311 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP F++ + R E G+ R REF DA+ F + P K ++ Sbjct: 312 RSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCM-PSQIKEQVLEILAFV 370 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + T + + + + D+ Sbjct: 371 DNLMKLFDFSYEMEI------------------STKPEKAIGDDEIWEIATKALKEALDE 412 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ K+ D+L + ++ F + Sbjct: 413 QGLKYGIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVD----FNLPS----CFKLE 461 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +D + + +G+ ++ + + + I + Sbjct: 462 YTDSDNEKKQPVMLHRAILGSFERFIGILTEHC------AGEFPFFIAPTAVGIVPIGEA 515 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ++I L ++ D + E + + +A+ P+ +++G V+ V ++ Sbjct: 516 HIAYAKEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRD 575 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R ++++SL+E I + S Sbjct: 576 RRAKEQKNLSLDEFIKLVKEKMSE 599 >gi|326382111|ref|ZP_08203803.1| threonyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395] gi|326198841|gb|EGD56023.1| threonyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395] Length = 700 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 70/454 (15%), Positives = 141/454 (31%), Gaps = 47/454 (10%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + G+ + P G + RE+ G Sbjct: 261 YLDRLAEAEKRDHRRLGAELDLFS-FPDELGSGLPVFHPKGGIIRKEMEDYSREQHAAGG 319 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEV 113 ++ P L + L+ SG D Y M + + P + + Sbjct: 320 YEFVNTPHLTKSTLFEVSGHLDWYADGMFPPMHLDAEYNEDGTLRKPGQDYYVKPMNCPM 379 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKH 172 IF S +SYR LP ++ +R E G+ R+R F DA+ + + + Sbjct: 380 HNLIFGSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRARGFTQDDAHIYCTQEQVVEE 439 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 L++ GL + + + S + D Sbjct: 440 L-TTTLNFVLQLLKDYGLDDFYLELST----------------KDPAKYVGSDEVWDEAT 482 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + + A Y + ++ D+L ++S ++ F Sbjct: 483 ETLRQVGESSGLELVPDPEGAAFYGPKI---SVQVKDALGRTWQMSTIQLD----FNLPE 535 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 ++ L +AT K V + G++ V+ + G +W V I + Sbjct: 536 RFQLEYTAT---DGTKKRPVMIHRALFGSIERFFGVLTEHYAGAFPVWLSPVQVVGIPVA 592 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 + D + + +RL D +++ + P ++ G + V Sbjct: 593 ------EAFADHLQNVVSRLKGRRVRAEVDFSDDRMQKKIRNHTTAKVPFMLLAGERDVQ 646 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 + V + R + ++E I + R Sbjct: 647 ANAVSFRFRDGTQLNGVPVDEAIVAIDEWEESRR 680 >gi|148239112|ref|YP_001224499.1| threonyl-tRNA synthetase [Synechococcus sp. WH 7803] gi|166225511|sp|A5GJT7|SYT_SYNPW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|147847651|emb|CAK23202.1| Threonyl-tRNA synthetase [Synechococcus sp. WH 7803] Length = 610 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 67/426 (15%), Positives = 136/426 (31%), Gaps = 36/426 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD L L + + + G+ W P G + + R+ G + Sbjct: 203 EEALRRDHRRIGKDLDLFS-IEDEAGAGLVFWHPRGARMRLLIEEFWRQAHFEGGYELLY 261 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + LW SG D Y + M + +++ P + + S ++SYR LP Sbjct: 262 TPHVADISLWKTSGHLDFYAESMFGPMEVDEREYQLKPMNCPFHVLTYASKLRSYRELPI 321 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + ++ +R E G+MR R F DA+ F L + S K+ RI Sbjct: 322 RWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDE-ILKILDLTERILSTFD 380 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + + P D + I Sbjct: 381 FNTYEINLSTRPEKS-----------------IGDDAVWDLATKGLIEALERKGWAYKID 423 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 E A Y D+ K+ D++ + S ++ F ++ L A + Sbjct: 424 EGGGAFYGPKIDL---KIEDAIGRMWQCSTIQLD----FNLPERFKLDYIAA--DGSKQR 474 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + + R + E+ + + E + Sbjct: 475 PIMIHRAIFGSLERFFGIMTENYAGDYPLWLAPEQVRLLPVT-------DEVQPYAESLL 527 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +L++ G D G+++G + + P+ ++G+K + V ++ R G + Sbjct: 528 DQLTQAGVRATIDRSGDRLGKLIRTGEQMKIPVLAVIGAKEAEQNAVSLRSRRDGDLGVV 587 Query: 430 SLEEVI 435 ++ +++ Sbjct: 588 AVADLL 593 >gi|164686598|ref|ZP_02210626.1| hypothetical protein CLOBAR_00190 [Clostridium bartlettii DSM 16795] gi|164604327|gb|EDQ97792.1| hypothetical protein CLOBAR_00190 [Clostridium bartlettii DSM 16795] Length = 566 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 118/260 (45%), Positives = 153/260 (58%), Gaps = 1/260 (0%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +P L+E P DAEI SH+LMLR GMI + + GIY+ LP+G + V IIREE N G Sbjct: 1 MLMPTLKEVPSDAEITSHQLMLRAGMIRKMASGIYNQLPMGIRVFRKVEDIIREEMNAKG 60 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 A E+S L A+LW ESGR+D G EM RL DRN + GPTHEE T I R+ I SY Sbjct: 61 AQEISCALLVPAELWQESGRWDVMGPEMFRLKDRNGRDYCLGPTHEETFTHIVRNEITSY 120 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 + LP YQI+ KFRDE RPRFGVMR+R F MKDAYSFD EG SY+ MF +Y RIF Sbjct: 121 KQLPLNLYQIETKFRDERRPRFGVMRTRNFTMKDAYSFDADQEGLDKSYDDMFDAYTRIF 180 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 R L + P++A+SG +GG S EF+V ++ GE ++ D+ E + + Sbjct: 181 ARCELDNSPVQADSGAMGGSASAEFMVKSEVGEDEIVFCSGC-DYAANIEKATSVNHEAS 239 Query: 246 NSIVEQWTAPYAATSDVHNE 265 +++ + E Sbjct: 240 TEEMKEMSEIETPNVHTIEE 259 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 77/193 (39%), Positives = 107/193 (55%), Gaps = 3/193 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 D N + D P+ + RG+EVGHIF GTKYS M ATF +GK + Sbjct: 370 FEGQVGDFRNVQEGDKCPKCGQPLEIMRGVEVGHIFKLGTKYSESMGATFLDQNGKSQPI 429 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R VAAVIE HD GIIWP ++AP+ + ++ + + + EKIY L Sbjct: 430 IMGCYGIGVERTVAAVIEQHHDENGIIWPLAIAPYHVVVVPVNVKKEEHLENAEKIYKEL 489 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G +V DD E+ G +F +DLLG P+++ VG K + D KVE K R +E +S++ Sbjct: 490 EAAGVEVLLDDRNERAGFKFKDSDLLGIPMRITVG-KDIVDGKVEFKLRKEADKEIISVD 548 Query: 433 EVINYASHRFSNN 445 EV++ F+ N Sbjct: 549 EVLDRVKAEFAKN 561 >gi|148675292|gb|EDL07239.1| threonyl-tRNA synthetase-like 2, isoform CRA_b [Mus musculus] Length = 559 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 79/448 (17%), Positives = 154/448 (34%), Gaps = 42/448 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD + L H S G +LP G + + IREE Sbjct: 142 KMMKDWEKFQEEAKSRDHRKIGKEQELF--FFHDLSPGSCFFLPRGAFIYNALMDFIREE 199 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ E+ P + ++ LW SG + Y M D P + +F Sbjct: 200 YHKRNFTEVLSPNMYNSKLWETSGHWQHYSNNMFTF-DVEKDTFALKPMNCPGHCLMFAH 258 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R +P F + R+EL G+ R R F DA+ F + + + Sbjct: 259 RPRSWREMPVRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCMVEQ-IEEEIKGCLH 317 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E D Sbjct: 318 FLQSVYSTFGFSFQLN-LSTRPEHFLGEIE-----------------IWDEAERQLQNSL 359 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + I A Y D+ K+ D++ + + ++ F +++L Sbjct: 360 VEFGKPWKINPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRFNLTYV 412 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K+ V + +G++ + A++ + G WP ++P ++ +I + Sbjct: 413 SK--DGDDKNRPVIIHRAILGSVERMIAILS---ENYGGKWPLWLSPRQVMVIPVGP--- 464 Query: 360 VCRDACEKIYARLSKVGC--DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 C + ++ + G DV DD + + A L + ++VG K ++ V Sbjct: 465 ACENYALQVSKECFEEGFMADVDLDDS-CTLNKKIRNAQLAQYNFILVVGEKEKINNAVN 523 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ R I ++S+ VI + + Sbjct: 524 VRTRDNKIHGEISIASVIEKLKNLKKSR 551 >gi|290989139|ref|XP_002677200.1| threonyl-tRNA synthetase [Naegleria gruberi] gi|284090806|gb|EFC44456.1| threonyl-tRNA synthetase [Naegleria gruberi] Length = 672 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 78/437 (17%), Positives = 148/437 (33%), Gaps = 42/437 (9%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ + + + RD I L H ++ G+ +LP GQ+ +++ +++R E Sbjct: 265 MKEWQTL--MEEAKKRDHRIIGKDQEL--WFFHPYAPGMVFFLPHGQRLFNSIQSLMRNE 320 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E+ P + +DLW SG +D Y + M + + + P + +F+ Sbjct: 321 YWHRGYSEVQTPNVFHSDLWKTSGHWDKYAENMF-VLEIDKAQHSLKPMNCPSHCLMFKH 379 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SYR LP F + R+EL+ G+ R R+F DA+ F + + Sbjct: 380 RTRSYRELPIRFADFGVLHRNELKGALTGMTRLRKFQQDDAHIFCRPDQIKSE-----IM 434 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 LR+ + F + T + D Sbjct: 435 GALRMMQDIYKIFGFG--------------FRLFLSTRPEKYLGEISQWDEAEGQLEAAL 480 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ E A Y D+ + D+L + + ++ F ++ L + Sbjct: 481 NEFGHSWQKNEGDGAFYGPKIDIL---ISDALKREHQCATVQLD----FQLPIRFDLTYA 533 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A + + R +A E A Sbjct: 534 AE--DKTESRPVIVHRAIFGSLERFLAIATEHFGGKWPFWLSPRQAIVVPV-------SN 584 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 C + EK+ RL + V D +I + A L + ++VG K + V I+ Sbjct: 585 KCNEYAEKVQKRLHEAKYYVDVDLSSNRIDKKIRNAQLSQYNYILVVGPKEMESDSVNIR 644 Query: 420 HRLT-GIREDMSLEEVI 435 R + + ++EE++ Sbjct: 645 IRDSDKEQGVKTIEELL 661 >gi|149057086|gb|EDM08409.1| threonyl-tRNA synthetase-like 2, isoform CRA_b [Rattus norvegicus] Length = 708 Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats. Identities = 77/438 (17%), Positives = 150/438 (34%), Gaps = 41/438 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H S G +LP G + + IREE ++ E+ Sbjct: 301 EEARSRDHRKIGKEQELF--FFHDLSPGSCFFLPRGAFIYNTLMDFIREEYHKRNFTEVL 358 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + ++ LW SG + Y M D P + +F +S+R +P Sbjct: 359 SPNMYNSKLWETSGHWQHYSNNMFTF-DIEKDTFALKPMNCPGHCLMFAHRPRSWREMPV 417 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F + R+EL G+ R R F DA+ F + + + ++ G Sbjct: 418 RFADFGVLHRNELSGTLTGLTRVRRFQQDDAHIFCMVEQ-IEEEIKGCLHFLQSVYSTFG 476 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 F + T + D I Sbjct: 477 FS------------------FQLNLSTRPEHFLGETEIWDEAERQLQNSLTGFGKPWKIN 518 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ K+ D++ + + ++ F +++L + D K+ Sbjct: 519 PGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRFNLTYVSK--DGDDKN 569 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + +G++ + A++ + G WP ++P ++ +I + C + ++ Sbjct: 570 RPVIIHRAILGSVERMIAILS---ENYGGKWPLWLSPRQVMIIPVGP---ACENYALQVS 623 Query: 370 ARLSKVGC--DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + G DV DD + + A L + ++VG K ++ V ++ R I Sbjct: 624 KECFEEGFMADVDLDDS-CTLNKKIRNAQLAQYNFILVVGEKEKLNNSVNVRTRDNKIHG 682 Query: 428 DMSLEEVINYASHRFSNN 445 ++S+ VI + + Sbjct: 683 EISITSVIEKLKNLKKSR 700 >gi|111219789|ref|YP_710583.1| threonyl-tRNA synthetase [Frankia alni ACN14a] gi|111147321|emb|CAJ58970.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) [Frankia alni ACN14a] Length = 682 Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 137/445 (30%), Gaps = 35/445 (7%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y + + RD L L + KG+ WLP G D + R+ + Sbjct: 248 LKEYLTALAEAAKRDHRRIGEDLDLFA-FSPEIGKGLPLWLPNGTIIRDELEGWARQTER 306 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 R G + P + DL+ SG Y +++ + P + ++++ Sbjct: 307 RLGYRRVVTPHITQEDLYFLSGHLPYYAEDLYAPIQIEGENYYLKPMNCPHHHMVYKARP 366 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR LP+ + +R E + G+MR+R F DA+ + + + M + Sbjct: 367 KSYRELPYKIAEYGTVYRFERSGQLHGLMRARGFTQNDAHIYCTREQAKEQFLEVMRMHD 426 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + A P H+ + + E D+ Sbjct: 427 EYYRALGITDFYMVLALRDPANTTKYHDDAQMWEDAERIT--------------REAMDE 472 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 A Y D + + S +++ F Sbjct: 473 SGIPYVEELGGAAHYGPKVDFIIRSVT---GKEFAASTNQVDLYTPQRFD--------LK 521 Query: 302 FKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + ADG D V + +G+ A + G +W I ++ Sbjct: 522 YHDADGTDKQVVVIHRAPLGSHERFVAFLTEHFGGAFPVWLAPEQVRVIPIMP------E 575 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + E + L V D ++ ++ A PL V+VG + V + V ++ Sbjct: 576 LDEYAETVSQALLDADVRVDVDASDGRLPARVRTAVTRKIPLIVVVGRREVEEGSVSVRD 635 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R +G M L + + Sbjct: 636 R-SGQETSMPLADFVRRVRELIDTR 659 >gi|149057085|gb|EDM08408.1| threonyl-tRNA synthetase-like 2, isoform CRA_a [Rattus norvegicus] Length = 790 Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats. Identities = 77/438 (17%), Positives = 150/438 (34%), Gaps = 41/438 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H S G +LP G + + IREE ++ E+ Sbjct: 383 EEARSRDHRKIGKEQELF--FFHDLSPGSCFFLPRGAFIYNTLMDFIREEYHKRNFTEVL 440 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + ++ LW SG + Y M D P + +F +S+R +P Sbjct: 441 SPNMYNSKLWETSGHWQHYSNNMFTF-DIEKDTFALKPMNCPGHCLMFAHRPRSWREMPV 499 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F + R+EL G+ R R F DA+ F + + + ++ G Sbjct: 500 RFADFGVLHRNELSGTLTGLTRVRRFQQDDAHIFCMVEQ-IEEEIKGCLHFLQSVYSTFG 558 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 F + T + D I Sbjct: 559 FS------------------FQLNLSTRPEHFLGETEIWDEAERQLQNSLTGFGKPWKIN 600 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ K+ D++ + + ++ F +++L + D K+ Sbjct: 601 PGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRFNLTYVSK--DGDDKN 651 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + +G++ + A++ + G WP ++P ++ +I + C + ++ Sbjct: 652 RPVIIHRAILGSVERMIAILS---ENYGGKWPLWLSPRQVMIIPVGP---ACENYALQVS 705 Query: 370 ARLSKVGC--DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + G DV DD + + A L + ++VG K ++ V ++ R I Sbjct: 706 KECFEEGFMADVDLDDS-CTLNKKIRNAQLAQYNFILVVGEKEKLNNSVNVRTRDNKIHG 764 Query: 428 DMSLEEVINYASHRFSNN 445 ++S+ VI + + Sbjct: 765 EISITSVIEKLKNLKKSR 782 >gi|49483426|ref|YP_040650.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252] gi|257425317|ref|ZP_05601742.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053] gi|257427978|ref|ZP_05604376.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322] gi|257430611|ref|ZP_05606993.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397] gi|257433371|ref|ZP_05609729.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410] gi|257436213|ref|ZP_05612260.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876] gi|282905581|ref|ZP_06313436.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260] gi|282908556|ref|ZP_06316386.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910835|ref|ZP_06318638.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WBG10049] gi|282914040|ref|ZP_06321827.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus M899] gi|282918962|ref|ZP_06326697.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427] gi|282924085|ref|ZP_06331761.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101] gi|283958006|ref|ZP_06375457.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus A017934/97] gi|293501072|ref|ZP_06666923.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424] gi|293510034|ref|ZP_06668742.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809] gi|293526620|ref|ZP_06671305.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus M1015] gi|295427750|ref|ZP_06820382.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297591292|ref|ZP_06949930.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus MN8] gi|81175023|sp|Q6GHH2|SYP_STAAR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|49241555|emb|CAG40241.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252] gi|257271774|gb|EEV03912.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053] gi|257274819|gb|EEV06306.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322] gi|257278739|gb|EEV09358.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397] gi|257281464|gb|EEV11601.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410] gi|257284495|gb|EEV14615.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876] gi|282314057|gb|EFB44449.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101] gi|282316772|gb|EFB47146.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427] gi|282322108|gb|EFB52432.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus M899] gi|282325440|gb|EFB55749.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WBG10049] gi|282327618|gb|EFB57901.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330873|gb|EFB60387.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260] gi|283790155|gb|EFC28972.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus A017934/97] gi|290920692|gb|EFD97755.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus M1015] gi|291096077|gb|EFE26338.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424] gi|291466978|gb|EFF09496.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809] gi|295128108|gb|EFG57742.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297576178|gb|EFH94894.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus MN8] gi|312438357|gb|ADQ77428.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60] gi|315194151|gb|EFU24544.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00] Length = 567 Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats. Identities = 115/282 (40%), Positives = 173/282 (61%), Gaps = 1/282 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK D+ E + Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSK-ESDYAANIEKAEVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 + Q + ++L D L + + Sbjct: 240 YEPNHKHTTVQPIEKIETPNVKTAQELADFLGRPVDEIVKTM 281 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 70/188 (37%), Positives = 110/188 (58%), Gaps = 4/188 (2%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D + L + V+ GIEVG +F GTKYS M+ATF GK + MG YG Sbjct: 382 DFRFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYG 441 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R ++A++E +HD GI+WP SV PF + LI+I R+ + +YA + D Sbjct: 442 IGISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEFNTK-FD 500 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V +DD E+ G +F ADL+G PL+++VG + S+ VE+K RLTG E++ +++++ Sbjct: 501 VLYDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVI 559 Query: 439 SHRFSNNR 446 ++++ N + Sbjct: 560 TNKYDNLK 567 >gi|330834508|ref|YP_004409236.1| threonyl-tRNA synthetase [Metallosphaera cuprina Ar-4] gi|329566647|gb|AEB94752.1| threonyl-tRNA synthetase [Metallosphaera cuprina Ar-4] Length = 562 Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats. Identities = 85/442 (19%), Positives = 169/442 (38%), Gaps = 37/442 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + + D I ++ L + + G+ + P GQ + + + +RE + G Sbjct: 145 YLQWLEKASETDHRIIGERMDLFSFH-DETGPGLVLFHPKGQLIRNEMISYMREINSSMG 203 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ + LW SG YD+Y +ML +++D + P + I++S ++SY Sbjct: 204 YQEVYTSHVFRTVLWKISGHYDTYRDKMLIF-NKDDDELGIKPMNCPAHILIYKSRVRSY 262 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F + +R E + +G++R+R F D + F + + L + Sbjct: 263 RDLPLRFSEFGNVYRWEKKGELYGLLRTRGFTQDDGHIFLREDQIRDE-VKTLINKTLEV 321 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 ++ G + +R T + S + + S ++ + Sbjct: 322 LNKFGFRGDDVRINL---------------STRPDESIGSDEQWEKATNSLLNVLKELGT 366 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E+ A Y D + DSL ++S ++ F ++ + Sbjct: 367 QFIIKEKEGAFYGPKIDFD---IRDSLNRWWQLSTIQVD----FNLPERF----KLEYVD 415 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + G++ + A++ G+ W ++P ++ ++ I + ++ Sbjct: 416 EDGSKKRPVMIHRAIYGSLDRMIAILLEHFRGRLPAW---LSPVQVRILPI---SEENQE 469 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 KI L + G D GE + + A G P VIVG K + KV I+ R Sbjct: 470 YANKILVMLRENGIRGELDPSGETLSKRIKRAYDEGVPYLVIVGRKEALEEKVTIRSRGN 529 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + L++ I + N Sbjct: 530 VEVKGVPLKDFIEKINLEVRNR 551 >gi|194467742|ref|ZP_03073728.1| prolyl-tRNA synthetase [Lactobacillus reuteri 100-23] gi|194452595|gb|EDX41493.1| prolyl-tRNA synthetase [Lactobacillus reuteri 100-23] Length = 577 Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats. Identities = 115/271 (42%), Positives = 160/271 (59%), Gaps = 6/271 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P +E P DAE SHK+M+R G I+Q S G++S+LPL + + V IIR+E Sbjct: 1 MKQSKVLIPTKKEVPSDAEALSHKMMIRAGYIYQVSAGVWSYLPLAYRVIRKVENIIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM +P L ADLW ESGRY+SYG + +L DR D+ I GPTHEE T++ R Sbjct: 61 MDKAGAVEMLMPGLLPADLWKESGRYESYGDNLFKLKDRRDRDFILGPTHEETFTEVLRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQ+Q KFRDE RPR+G++R +EF M D YSF EG +YN + Sbjct: 121 SIKSYKKLPLVVYQLQDKFRDEDRPRYGILRGKEFEMLDGYSFSADQEGLDEAYNNQAKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R+GL + A+SG +GG S EF A+ GE + + D+ E + Sbjct: 181 YRNIFDRIGLNYKVILADSGTMGGKNSQEFSAPAEVGEDIIAYTDG--DYAANIEKAESK 238 Query: 241 DII----SLNSIVEQWTAPYAATSDVHNEKL 267 + + + +E+ P A T D E L Sbjct: 239 FVGVQQTAAPAPIEKKATPGAHTVDEAAESL 269 Score = 160 bits (404), Expect = 5e-37, Method: Composition-based stats. Identities = 70/190 (36%), Positives = 106/190 (55%), Gaps = 5/190 (2%) Query: 261 DVHNEKLFDSLPENK-RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 D N K + P+ K GIE+GHIF GT YS + A ++G+ V MGSYGI Sbjct: 387 DFRNVKEGEIAPDGKPLKFTPGIEIGHIFKLGTHYSSKLGAQVLDSNGRLTDVIMGSYGI 446 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G R+++AV E + D G++WPDS+APF + +I + A + +KI +L++ G +V Sbjct: 447 GVTRLLSAVAEQNADENGLVWPDSIAPFDVHVIPVNAKKEDQMAMADKIDQQLTEAGYEV 506 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV---IN 436 DD E+ G +FA +DL+G P++V VG K D VEIK R TG ++ EE+ + Sbjct: 507 LVDDRKERAGVKFADSDLIGIPIRVTVGKK-AQDGIVEIKIRKTGETVEVKQEELVNTVE 565 Query: 437 YASHRFSNNR 446 + + + Sbjct: 566 ILLKQLNEEK 575 >gi|254373305|ref|ZP_04988793.1| prolyl-tRNA synthetase [Francisella tularensis subsp. novicida GA99-3549] gi|151571031|gb|EDN36685.1| prolyl-tRNA synthetase [Francisella novicida GA99-3549] Length = 565 Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats. Identities = 113/333 (33%), Positives = 187/333 (56%), Gaps = 6/333 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+PLG K L + I+R+E Sbjct: 1 MKATQTLIATTKELPKEAVLISHQYMLKAGLIKKLASGIYTWMPLGVKVLQKIQNIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 61 MNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +++YN M+ + Sbjct: 121 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y I ++GL P++A++G IGGD SHEF VLA+ GE + C + D+ E Sbjct: 181 YCNILDKIGLAYRPVKADTGAIGGDNSHEFQVLANAGE-DIICYSNGSDYAANIELATYA 239 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 D ++ + +E+ P T + +++ + + + G+ F + Sbjct: 240 KPDLSKRVNSQNTIEKIHTPNIKTIEKLCKEMSFDIKKTIKTMVIKDAEGNFFALVIRGD 299 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 ++ T + + + A Sbjct: 300 HELNETKINKLEQIVAPYTLATKEEIFSIFNAN 332 Score = 153 bits (386), Expect = 6e-35, Method: Composition-based stats. Identities = 69/183 (37%), Positives = 104/183 (56%), Gaps = 3/183 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K GIEVGHIF YS PM+A G DGK + MG Y Sbjct: 383 ADIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVG 376 G G RV+AA IE SHD GIIWP+S+AP++++++ I ++ +K+Y L G Sbjct: 443 GFGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKVKEVADKLYQDLLGDG 502 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD G + G FA ADL+G+ V++G + + +E K+R T ++++++ E+I Sbjct: 503 IDVLLDDRGARPGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITIAELIK 562 Query: 437 YAS 439 + Sbjct: 563 ILT 565 >gi|283955645|ref|ZP_06373138.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336] gi|283792870|gb|EFC31646.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336] Length = 602 Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats. Identities = 72/444 (16%), Positives = 151/444 (34%), Gaps = 40/444 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y I + RD +L L T + G+ WL G + + ++ + Sbjct: 194 LKEYLTIIEEAKKRDHRKLGTELKLFT-FDDEIGGGLPIWLSNGARLRSKLEHMLYKIHR 252 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P L AD W SG Y +Y + M +++ P + I++S + Sbjct: 253 LRGYEPVRGPELLKADAWKISGHYANYKENM-YFTQIDEQEYGIKPMNCVGHIKIYQSDV 311 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP F++ + R E G+ R REF DA+ F + P K ++ Sbjct: 312 RSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCM-PSQIKEQVLEILAFV 370 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + T + + + + D+ Sbjct: 371 DNLMKLFDFSYEMEI------------------STKPEKAIGDDEIWEIATKALKEALDE 412 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ K+ D+L + ++ F +++ Sbjct: 413 QGLKYGIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVD----FNLPSRF----KLE 461 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +D + + +G+ ++ + + + I + Sbjct: 462 YTDSDNEKKQPVMLHRAILGSFERFIGILTEHC------AGEFPFFIAPTAVGIVPIGEA 515 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ++I L ++ D + E + + +A+ P+ +++G V+ V ++ Sbjct: 516 HIAYAKEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRD 575 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R ++++SL+E I + S Sbjct: 576 RRAKEQKNLSLDEFIKLVKEKMSE 599 >gi|152993995|ref|YP_001359716.1| threonyl-tRNA synthetase [Sulfurovum sp. NBC37-1] gi|166225510|sp|A6QD00|SYT_SULNB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|151425856|dbj|BAF73359.1| threonyl-tRNA synthetase [Sulfurovum sp. NBC37-1] Length = 604 Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats. Identities = 75/444 (16%), Positives = 159/444 (35%), Gaps = 39/444 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +++E RD ++ L + G+ W+P G K + I+ + Sbjct: 197 KSYLKMMEEAKKRDHRKIGTEMELFM-FNEESGAGLPFWMPQGAKLRYKLEQILHKAHLV 255 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 + P + AD+W SG Y YG+ M L + + + P + IF+ K Sbjct: 256 RDYEPVRGPEILKADMWRTSGHYACYGENM-YLTEIDGQEYGIKPMNCIGHIQIFKQTQK 314 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP +Y+ + R E G++R REF DA+ F + + + Sbjct: 315 SYRDLPVKYYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCAPEQIASEVLEVVEFV-- 372 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + E+ + T + + + Sbjct: 373 -----------------DSVMKLFEFEYTMEISTKPEKAIGDDEVWETATQGLKDALKGN 415 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 +I E A Y D+ K+ D++ + ++ F ++ + A Sbjct: 416 DLPYTIDEGGGAFYGPKIDI---KITDAIGRKWQCGTIQVD----FNLPERFDVEYVAE- 467 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + V + +G+ ++ + G+ + +AP ++ + I + Sbjct: 468 --DNSRKRPVMLHRAILGSFERFIGILTEHYAGEFPFF---IAPTQVIFVPI---SEGHA 519 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +L G D D + + + A+ P VI+G + V ++ V I++R Sbjct: 520 GYAYGLKKKLMLEGIDSEVSDKNDSLNKRIRTAEKQRVPYVVIIGDEEVQNNTVAIRNRR 579 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 T + +++ +E + + + + Sbjct: 580 TREQYNLTQDEFMVELTKQLQEGK 603 >gi|88597312|ref|ZP_01100547.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25] gi|218561885|ref|YP_002343664.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|73919778|sp|Q9PIS3|SYT_CAMJE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|88190373|gb|EAQ94347.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25] gi|112359591|emb|CAL34375.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925497|gb|ADC27849.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902] gi|315928137|gb|EFV07455.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 602 Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats. Identities = 72/444 (16%), Positives = 151/444 (34%), Gaps = 40/444 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y I + RD +L L T + G+ WL G + + ++ + Sbjct: 194 LKEYLTIIEEAKKRDHRKLGTELKLFT-FDDEIGGGLPIWLSNGARLRSKLEHMLYKIHR 252 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P L AD W SG Y +Y + M +++ P + I++S + Sbjct: 253 LRGYEPVRGPELLKADAWKISGHYANYKENM-YFTQIDEQEYGIKPMNCVGHIKIYQSDV 311 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP F++ + R E G+ R REF DA+ F + P K ++ Sbjct: 312 RSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCM-PSQIKEQVLEILAFV 370 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + T + + + + D+ Sbjct: 371 DNLMKLFDFSYEMEI------------------STKPEKAIGDDEIWEIATKALKEALDE 412 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ K+ D+L + ++ F +++ Sbjct: 413 QGLKYGIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVD----FNLPSRF----KLE 461 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +D + + +G+ ++ + + + I + Sbjct: 462 YTDSDNEKKQPVMLHRAILGSFERFIGILTEHC------AGEFPFFIAPTAVGIVPIGEA 515 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ++I L ++ D + E + + +A+ P+ +++G V+ V ++ Sbjct: 516 HIAYAKEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRD 575 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R ++++SL+E I + S Sbjct: 576 RRAKEQKNLSLDEFIKLVKEKMSE 599 >gi|119963884|ref|YP_948047.1| threonyl-tRNA synthetase [Arthrobacter aurescens TC1] gi|166223318|sp|A1R735|SYT_ARTAT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|119950743|gb|ABM09654.1| threonyl-tRNA synthetase [Arthrobacter aurescens TC1] Length = 669 Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats. Identities = 65/451 (14%), Positives = 125/451 (27%), Gaps = 49/451 (10%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 I + RD +L L + + G+ + P G + R+ G Sbjct: 252 RIAEAERRDHRKLGVELDLFS-FPDELGSGLPVFHPKGGIIRKAMEDYSRQRHVDAGYEF 310 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTD 116 + P + L+ SG D Y M + + P + + Sbjct: 311 VYTPHITKGHLYEVSGHLDWYKDGMFPAMQVDAEFNEDGSVRKPAQDYYLKPMNCPMHNL 370 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IFRS +SYR LP ++ +R E G+ R R DA+ + + Sbjct: 371 IFRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTREQMKDEL-T 429 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 L + GL + + E + + + Sbjct: 430 TTLNFVLGLLKDYGLDDFYLELST----------------KNEEKFVGDDAAWEEATRTL 473 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 + + A Y + + D+L ++S ++ F ++ Sbjct: 474 SEVAEASGLHLVPDPGGAAFYGPKI---SVQAKDALGRTWQMSTIQLD----FNLPERF- 525 Query: 296 LPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 ++ ADG + G++ V+ + G W V I + Sbjct: 526 ---ELEYQAADGTRQRPVMIHRALFGSVERFMGVLTEHYAGAFPAWLAPVQVVGIPVA-- 580 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 + D + +L G D ++ + A P +I G + Sbjct: 581 ----ETFNDYMFDVVGQLKAAGIRAEVDISSDRFPKKIRTASKDKIPFVLIAGGEDAEAG 636 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + R + + E + N Sbjct: 637 AVSFRFRDGSQDNGVPVAEAVRRIVDAVKNR 667 >gi|256825369|ref|YP_003149329.1| threonyl-tRNA synthetase [Kytococcus sedentarius DSM 20547] gi|256688762|gb|ACV06564.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Kytococcus sedentarius DSM 20547] Length = 660 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 66/446 (14%), Positives = 137/446 (30%), Gaps = 31/446 (6%) Query: 5 KYFLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L + RD ++ L + + G+ + P G + + + Sbjct: 244 KAYQERLAEAERRDHRKLGAEMDLYS-FPEEVGPGLPVFHPKGAILRRTMEDYVWKRHVE 302 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G ++ P L L+ SG Y M+ D + +A + + I+RS + Sbjct: 303 EGFSYVTTPHLSKEGLFHTSGHLPYYADGMMPELDDDGQAYRIKAMNCPMHNLIYRSQQR 362 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP +++ +R+E G+ R R D++S+ + + L Sbjct: 363 SYRELPLRYFEFGTVYRNEKSGVLQGLTRVRMITQDDSHSYVTREQAPGE-VKHLLDFVL 421 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + G+ + + GD +FI + + Sbjct: 422 SLLRDFGMDDYYLELSTRAEEGDKKDKFIGTDEQ-----------WAEATAVLEQVATET 470 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + + D++ ++S + FG +YS Sbjct: 471 GLELVPDPGGAAYYGPKI---SVQARDAIGRTWQMSTIQYDFNQPERFGLEYS------- 520 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + V + S G++ V+ + G+ +W V + + + + Sbjct: 521 AADGTRQQPVMIHSAKFGSIERFIGVLVEHYAGQFPVWLAPVQVLGVPVA------EDFQ 574 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 E + A++ G D ++ + A P +I G + V + R Sbjct: 575 PYLEDVLAQMRAQGIRTEIDASDDRFPKKIRNASKSKVPFTLIAGGEDRDAGAVSFRFRD 634 Query: 423 TGIREDMSLEEVINYASHRFSNNRPV 448 + + + I V Sbjct: 635 GSQENGVPVADAIARIREAIDTRAQV 660 >gi|57237210|ref|YP_178222.1| threonyl-tRNA synthetase [Campylobacter jejuni RM1221] gi|73919779|sp|Q5HWW3|SYT_CAMJR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|57166014|gb|AAW34793.1| threonyl-tRNA synthetase [Campylobacter jejuni RM1221] gi|315057643|gb|ADT71972.1| Threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3] Length = 602 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 72/444 (16%), Positives = 151/444 (34%), Gaps = 40/444 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y I + RD +L L T + G+ WL G + + ++ + Sbjct: 194 LKEYLTIIEEAKKRDHRKLGTELKLFT-FDDEIGGGLPIWLSNGARLRSKLEHMLYKIHR 252 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P L AD W SG Y +Y + M +++ P + I++S + Sbjct: 253 LRGYEPVRGPELLKADAWKISGHYANYKENM-YFTQIDEQEYGIKPMNCVGHIKIYQSDV 311 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP F++ + R E G+ R REF DA+ F + P K ++ Sbjct: 312 RSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCM-PSQIKEQVLEILAFV 370 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + T + + + + D+ Sbjct: 371 DNLMKLFDFSYEMEI------------------STKPEKAIGDDEIWEVATKALKEALDE 412 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ K+ D+L + ++ F +++ Sbjct: 413 QGLKYGIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVD----FNLPSRF----KLE 461 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +D + + +G+ ++ + + + I + Sbjct: 462 YTDSDNEKKQPVMLHRAILGSFERFIGILTEHC------AGEFPFFIAPTAVGIVPIGEA 515 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ++I L ++ D + E + + +A+ P+ +++G V+ V ++ Sbjct: 516 HIAYAKEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRD 575 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R ++++SL+E I + S Sbjct: 576 RRAKEQKNLSLDEFIKLVKEKMSE 599 >gi|120403299|ref|YP_953128.1| prolyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1] gi|152112935|sp|A1T7H2|SYP_MYCVP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|119956117|gb|ABM13122.1| prolyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1] Length = 585 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 98/249 (39%), Positives = 140/249 (56%), Gaps = 1/249 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ SHKL++R G + G+YSWLPLG K L + I+R E Sbjct: 4 RMSELFLRTLRDDPADAEVPSHKLLIRAGYVRPVGPGLYSWLPLGLKVLRKIENIVRNEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + R+ YG + RL DR + + GPTHEE+ T + Sbjct: 64 NAIGGQEILFPALLPRAPYETTNRWTEYGDTLFRLQDRRNNDYLLGPTHEEMFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ K+RDE RPR G++R REFLMKD+YSFD+ +G K++Y +Y Sbjct: 124 YSSYKDFPLRLYQIQNKYRDEARPRAGILRGREFLMKDSYSFDIDDDGLKNAYIAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPSENTDFD 240 RIF L ++ + + A SG +GG S EF+ +D GE C + + + T Sbjct: 184 QRIFDLLKVRYVIVSAVSGAMGGSASEEFLAESDVGEDTYVRCLQSGYAANVEAVVTMVP 243 Query: 241 DIISLNSIV 249 + IS I Sbjct: 244 EPISSEQIA 252 Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats. Identities = 64/188 (34%), Positives = 97/188 (51%), Gaps = 4/188 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ V+ARGIE+GH+F G KY+ A G +GK + MG Sbjct: 398 GTIEAAEVREGDPSPDGAGPLVAARGIEIGHVFQLGRKYADAFGADVLGENGKPVRLTMG 457 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VA + E HD G+ WP +V+PF + + I D R ++ A L ++ Sbjct: 458 SYGIGVSRLVAVIAEQHHDELGLRWPSTVSPFDVH-VVIANKDADARTGATELAAELDRL 516 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD G +F A+LLG P V+VG + +D VE++ R G + ++ ++ Sbjct: 517 GVDVLLDDRTASPGVKFKDAELLGVPWIVVVG-RGWADGIVELRDRFGGDKHEIPVDGAA 575 Query: 436 NYASHRFS 443 S + Sbjct: 576 ERISAALA 583 >gi|332184487|gb|AEE26741.1| Prolyl-tRNA synthetase Bacterial type [Francisella cf. novicida 3523] Length = 565 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 112/289 (38%), Positives = 170/289 (58%), Gaps = 4/289 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+PLG K L + I+R+E Sbjct: 1 MKATQTLIATTKELPKEAVLISHQYMLKAGLIKKLASGIYTWMPLGLKVLQKIQDIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 61 MNKAGASELLLPSILPSELLQETHRWDKFGPELLKLRDRHNRDFCYGPTHEEPIVDMARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +++YN M+ + Sbjct: 121 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSQCLRNTYNIMYTT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y I ++GL P++A++G IGGD SHEF VLA+ GE + C + D+ E + Sbjct: 181 YCNILDKIGLAYRPVKADTGAIGGDNSHEFQVLANAGE-DIICYSNGSDYAANIELATYA 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY 289 +V Q N K D L + I Sbjct: 240 KPDLSKRVVSQ---NLITKIHTPNIKTIDKLCNQMNFDIKQTIKTMIIK 285 Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 67/184 (36%), Positives = 102/184 (55%), Gaps = 3/184 (1%) Query: 259 TSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D P+ K GIEVGHIF YS PM+A DGK + MG Sbjct: 382 VADIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIDQDGKSKPMLMGC 441 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKV 375 YG G RV+AA IE SHD GIIWP+++AP++++++ I ++ +K+Y L Sbjct: 442 YGFGVSRVMAAAIEQSHDQNGIIWPEAIAPYQVAILPINYNKSDKVKEVADKLYQDLLTN 501 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD G + G FA ADL+G+ V++G + + +E K+R T ++++++ E+I Sbjct: 502 GIDVLLDDRGARPGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITVTELI 561 Query: 436 NYAS 439 Sbjct: 562 EILK 565 >gi|183601640|ref|ZP_02963010.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis HN019] gi|219683826|ref|YP_002470209.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis AD011] gi|241190862|ref|YP_002968256.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196268|ref|YP_002969823.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|254783508|sp|B8DUF4|SYT_BIFA0 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|183219246|gb|EDT89887.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis HN019] gi|219621476|gb|ACL29633.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis AD011] gi|240249254|gb|ACS46194.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250822|gb|ACS47761.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289178601|gb|ADC85847.1| Threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis BB-12] gi|295793851|gb|ADG33386.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis V9] Length = 692 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 59/454 (12%), Positives = 135/454 (29%), Gaps = 49/454 (10%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + + RD ++ L + + G+ + P G ++ + RE + Sbjct: 247 RMEEAAKRDHRKLGQEMDLFS-FPDEIGPGLAVFHPKGAAIINAMEDYSREMHRKNHYSF 305 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTD 116 + P + L+ SG Y M + P + + Sbjct: 306 VQTPHITKGGLYETSGHLQWYKDGMYPPMHLDEEKDENGNIVKQGFDYYLKPMNCPMHNL 365 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 366 IFKSRQRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDSHIYCTREQMKDEL-K 424 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 + L++ GL + + E + S + + + Sbjct: 425 NLLNFVLKVLKDYGLNDFYLELST----------------KDEHKFVGSDEIWEEATNTL 468 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 ++ A Y + + D++ +VS ++ F ++ Sbjct: 469 AEVAEESGLELVADPGGAAFYGPKI---SVQARDAIGRTWQVSTIQLD----FNLPERF- 520 Query: 296 LPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + DG + G++ A++ + G W V + + Sbjct: 521 ---QLEYIAPDGSHQRPVMIHRALFGSIERFFAILLEHYAGAFPAWLAPVQALGVPVA-- 575 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 +K L + V D+ ++ G + A P +I G + ++++ Sbjct: 576 ----DEFAPHLDKFMNSLEEDLVRVETDNSDDRFGKKIRNASKSKVPYIIIAGEEDMNNN 631 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 V + R + +++ + + V Sbjct: 632 AVSFRFRDGSQLNGVPVDQAKAWILETITKRVQV 665 >gi|158334707|ref|YP_001515879.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017] gi|158304948|gb|ABW26565.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017] Length = 606 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 74/442 (16%), Positives = 139/442 (31%), Gaps = 41/442 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD +L L G+ W P G + +++EQ + G + ++ Sbjct: 194 EEALRRDHRKLGKELGLFL-FSDLVGPGLPLWTPKGTLLRSQLEDFLKQEQIQRGYLGVT 252 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKA------MIYGPTHEEVMTDIFRSHIKS 124 P + DL+ SG + Y ++M L ND + P + I++S ++S Sbjct: 253 TPHIARVDLFKTSGHWQKYQEDMFPLMSENDADRSSEQGFVMKPMNCPFHIQIYKSELRS 312 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR+LP + +R E G + D +TP+ + K+ L + Sbjct: 313 YRDLPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLDDEFLKVVDLILSV 372 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F +L LK+ R D + S + + + + + Sbjct: 373 FEKLQLKNFKARLS--------------FRDPDSDKYIGSDEAWEKSQNAIRRAVETLGM 418 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y D D L ++ ++ F G Sbjct: 419 EHFEGIGEAAFYGPKLDFI---FQDVLDREWQLGTVQVDYNLP--------ERFDLEFMG 467 Query: 305 ADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG M R++ +IE + + Sbjct: 468 EDGNRQRPIMIHRAPFGSLERLIGILIEEYAGVFPLWLAPEQVRLLTV-------NDDHM 520 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + + L G V D G+++G + A+ P+ ++G K V + I+ R Sbjct: 521 PFAQAVATDLQAAGIRVSVDQSGDRLGKKIRNAEKAKIPVMSVIGDKEVEAHSLNIRTRA 580 Query: 423 TGIREDMSLEEVINYASHRFSN 444 +G + ++EV S Sbjct: 581 SGELGAIPVDEVKQKLGDAIST 602 >gi|116330596|ref|YP_800314.1| prolyl-tRNA synthetase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122281649|sp|Q04U64|SYP_LEPBJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116124285|gb|ABJ75556.1| Prolyl-tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 576 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 115/239 (48%), Positives = 158/239 (66%), Gaps = 1/239 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SKY LP +ENP DA +ASH+LM+R G+ + S G+Y +LPLG K L + IIREE Sbjct: 1 MKASKYILPTEKENPSDAVVASHRLMIRAGLARKSSAGLYFYLPLGLKILQKIKQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+TGA+E +P L +D W +SGR+ + GKEM R+ DR+D + GPTHEE + + + Sbjct: 61 MNKTGALEFDLPILTPSDFWEQSGRWTAMGKEMFRIKDRHDLSYALGPTHEESFSFLLKP 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY++LP YQIQ KFRDE+RPRFGV+RSREF+MKDAYSF + +Y M + Sbjct: 121 LLKSYKDLPLNVYQIQTKFRDEIRPRFGVIRSREFIMKDAYSFHIDDVSLDETYQSMRAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y +IF R GLK+IP++A+SG +GG S EF+V++ GE + + SE T Sbjct: 181 YRKIFDRCGLKTIPVQADSGSMGGSASEEFMVVSPIGEETLLLCNSC-GYSSNSEKTPL 238 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 72/261 (27%), Positives = 115/261 (44%), Gaps = 11/261 (4%) Query: 198 ESGPIGGDLSHE------FIVLADTGETQVFCSKDFMDFPIP-SENTDFDDIISLNSIVE 250 +S P+ E FI + + P ++ +D + ++E Sbjct: 313 DSEPMTDAEIRELGLVPGFIAPVAPNDKVKVLYDRSLQKDFPYVVASNKEDFHTQGFVLE 372 Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + + +DV + D P + +GIEVGHIF G KY+ +GK Sbjct: 373 KEVSGLPEFADVALAREGDLCPNCNAPLKAEKGIEVGHIFKLGEKYTKAFGIQVLDQNGK 432 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + MG YGIG R +A VIE +D KGI WP S+APF+++L++I + E+ Sbjct: 433 ARTLTMGCYGIGVNRTMATVIEQRNDEKGIFWPISIAPFEVTLVSITKG-EEQYSKAEEF 491 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 Y L +VFWDD G + ++L+GFP++V +G KF + ++ I +R E Sbjct: 492 YNVLKNENLEVFWDDRDVGPGFKLKDSELIGFPIRVTIGKKFFENGEISIYNRKADKEES 551 Query: 429 MSLEEVINYASHRFSNNRPVL 449 N + R + R L Sbjct: 552 FVFAGFENLIA-RVESLRQEL 571 >gi|282903818|ref|ZP_06311706.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus C160] gi|282595436|gb|EFC00400.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus C160] Length = 567 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 118/294 (40%), Positives = 176/294 (59%), Gaps = 5/294 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK D+ E + Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSK-ESDYAANIEKAEVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY 294 + Q + ++L D L + IF +Y Sbjct: 240 YEPNHKHTTVQPIEKIETPNVKTAQELADFLGRPVDEIVKT----MIFKVDDEY 289 Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats. Identities = 70/188 (37%), Positives = 110/188 (58%), Gaps = 4/188 (2%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D + L + V+ GIEVG +F GTKYS M+ATF GK + MG YG Sbjct: 382 DFRFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYG 441 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R ++A++E +HD GI+WP SV PF + LI+I R+ + +YA + D Sbjct: 442 IGISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEFNTK-FD 500 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V +DD E+ G +F ADL+G PL+++VG + S+ VE+K RLTG E++ +++++ Sbjct: 501 VLYDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVI 559 Query: 439 SHRFSNNR 446 ++++ N + Sbjct: 560 TNKYDNLK 567 >gi|72161176|ref|YP_288833.1| prolyl-tRNA synthetase [Thermobifida fusca YX] gi|114152272|sp|Q47RV7|SYP_THEFY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|71914908|gb|AAZ54810.1| prolyl-tRNA synthetase, bacterial [Thermobifida fusca YX] Length = 582 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 108/239 (45%), Positives = 148/239 (61%), Gaps = 1/239 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G + + + G+YSWLPLG+ L+NV A++REE Sbjct: 4 RMSNLFLRTLREDPADAEVPSHKLLVRGGFVRRTAPGVYSWLPLGKIVLENVAAVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 NR GA E+ +P L + + +GR+ YG + RL DR + GPTHEE+ T + + Sbjct: 64 NRIGAQEVLLPALLPREYYEATGRWTEYGDTLFRLKDRKGADYLLGPTHEELFTLLVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ KFRDE RPR G++R REF MKD+YSFDL EG + SY +Y Sbjct: 124 YTSYKDYPVILYQIQEKFRDEARPRAGILRGREFHMKDSYSFDLDDEGLQRSYEAHRQAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 +RIF RLGL+ + ++A SG +GG S EF+ +A TGE F D+ E Sbjct: 184 IRIFDRLGLEYVIVKATSGAMGGSASEEFLAIAPTGE-DTFVRSTGSDYAANVEAVVTP 241 Score = 142 bits (359), Expect = 8e-32, Method: Composition-based stats. Identities = 70/189 (37%), Positives = 102/189 (53%), Gaps = 6/189 (3%) Query: 258 ATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ K RGIE+GH+F G KY+ S G DGK + MG Sbjct: 396 GTIEAAEVRDGDPAPDGKGTLYTARGIEIGHVFQLGRKYTDAFSLDALGPDGKPVRITMG 455 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG RVVAA++E SHD +GIIWP VAP + ++ DQV + +I L Sbjct: 456 SYGIGVSRVVAAIVEQSHDERGIIWPREVAPADVHVVGTGKGDQV--EVALRISQELVDR 513 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G V DD G G +F A+LLG P +IVG + +++ VE++ R +G R ++S++ V Sbjct: 514 GVRVLVDDRKGVSPGVKFTDAELLGVPTVLIVG-RGLANGVVELRDRASGDRSEVSVDTV 572 Query: 435 INYASHRFS 443 ++ + Sbjct: 573 VDTIVNLVR 581 >gi|86153772|ref|ZP_01071975.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13] gi|85842733|gb|EAQ59945.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13] Length = 602 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 72/444 (16%), Positives = 150/444 (33%), Gaps = 40/444 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y I + RD +L L T + G+ WL G + + ++ + Sbjct: 194 LKEYLTIIEEAKKRDHRKLGTELKLFT-FDDEIGGGLPIWLSNGARLRSKLEHMLYKIHR 252 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P L AD W SG Y +Y + M +++ P + I++S + Sbjct: 253 LRGYEPVRGPELLKADAWKISGHYANYKENM-YFTQIDEQEYGIKPMNCVGHIKIYQSDV 311 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP F++ + R E G+ R REF DA+ F + P K ++ Sbjct: 312 RSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCM-PSQIKEQVLEILAFV 370 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + T + + + + D Sbjct: 371 DNLMKLFDFSYEMEI------------------STKPEKAIGDDEIWEIATKALKEALDK 412 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ K+ D+L + ++ F +++ Sbjct: 413 QGLKYGIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVD----FNLPSRF----KLE 461 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +D + + +G+ ++ + + + I + Sbjct: 462 YTDSDNEKKQPVMLHRAILGSFERFIGILTEHC------AGEFPFFIAPTAVGIVPIGEA 515 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ++I L ++ D + E + + +A+ P+ +++G V+ V ++ Sbjct: 516 HIAYAKEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRD 575 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R ++++SL+E I + S Sbjct: 576 RRAKEQKNLSLDEFIKLVKEKMSE 599 >gi|269795047|ref|YP_003314502.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Sanguibacter keddieii DSM 10542] gi|269097232|gb|ACZ21668.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Sanguibacter keddieii DSM 10542] Length = 676 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 68/450 (15%), Positives = 130/450 (28%), Gaps = 47/450 (10%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + G+ + P G + R+ G ++ Sbjct: 261 EAERRDHRRLGSELDLFS-FPDEIGSGLAVFHPKGGIIRSEMEQYSRKRHVEEGYSFVNT 319 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDIFR 119 P + L++ SG D Y M + + P + + IF Sbjct: 320 PHITKEQLFLTSGHLDWYADGMYPPMHLDEEVDADGTVRKAGQNYYLKPMNCPMHNLIFA 379 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 S +SYR LP ++ +R E G+ R R F DA+ + + Sbjct: 380 SRGRSYRELPLRLFEFGTVYRYEKSGVVHGLARGRGFTQDDAHIYCTREQMKDEL-TTSL 438 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L + GL + + + D + + Sbjct: 439 NFVLGLLKDYGLDDFYLELSTRDPEKS----------------VGTDDAWEEATRTLEEV 482 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 A Y + + D++ ++S ++ F K+ L Sbjct: 483 AVASGLDLVPDPGGAAFYGPKI---SVQAKDAIGRTWQMSTIQLD----FNLPEKFDLEF 535 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 +A + V + G++ AV+ + G W V + + Sbjct: 536 AAA---DGTRQRPVMIHRALFGSIERFFAVLTEHYAGAFPAWLAPVQVLAVPVA------ 586 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + D + A+L K G DD ++ + A P +I G + V Sbjct: 587 EPFNDYLADVVAQLRKAGVRADLDDSSDRFAKKIRTASTQKIPFVLIAGGEDAEAGAVSF 646 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNNRPV 448 ++R + + E I + V Sbjct: 647 RYRDGRQENGVPVAEAIERVLAAVRDRVQV 676 >gi|297571190|ref|YP_003696964.1| prolyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595] gi|296931537|gb|ADH92345.1| prolyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595] Length = 595 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 98/236 (41%), Positives = 140/236 (59%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+ F+ L+++P DAE+ SHKL++R G + + + GIY+WLPLG K L V A++REE + Sbjct: 1 MSELFVRTLRDDPADAEVRSHKLLVRAGYVRRAAPGIYTWLPLGLKVLRKVEAVVREEMD 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G+ EM P L + + + R++ YG + RL DR + + PTHEE+ T + Sbjct: 61 AAGSQEMHFPALLPREPYEATNRWEEYGPNLFRLKDRRENDYLLAPTHEEMFTLAVKDMY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP + YQIQ K+RDE RPR G++R+REF+MKDAYSFD+ G HSY M +Y Sbjct: 121 SSYKDLPVSLYQIQHKYRDEARPRAGIIRTREFIMKDAYSFDIDDSGLDHSYETMRNAYQ 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 RIF RLG+ + A+SG +GG S EF+ GE S + T Sbjct: 181 RIFTRLGVPFVICSAQSGAMGGSRSEEFLAPCAIGEDTFVKSAGGYAANTEAVTTP 236 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 95/192 (49%), Gaps = 5/192 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ RGIE+GHIF G KY+ + +GK V MG Sbjct: 406 GTIEAVEVRAGDQAPDGSGPLSIERGIEIGHIFQLGRKYAKALDLKVLDQNGKAVVVTMG 465 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG RV+AA+ E + D KG+ WP +AP + +I D D + A LS+ Sbjct: 466 SYGIGVSRVMAALAELNSDDKGLAWPAHLAPATVHVIATG-KDDAVFDTASRFAAELSEQ 524 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD G +FA +L+G P ++VG + + D KVEI+ R +G ++ + + Sbjct: 525 GVEVIYDDRVKVSAGVKFADYELIGVPFAIVVG-RGLKDGKVEIRDRRSGENVEVPVGDA 583 Query: 435 INYASHRFSNNR 446 + + + Sbjct: 584 LATLDSVMAAAK 595 >gi|292655832|ref|YP_003535729.1| threonyl-tRNA synthetase [Haloferax volcanii DS2] gi|291370664|gb|ADE02891.1| threonyl-tRNA synthetase [Haloferax volcanii DS2] Length = 643 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 86/445 (19%), Positives = 149/445 (33%), Gaps = 47/445 (10%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 FL + +E RD +L L I + G+ + P G++ LD + ++ Sbjct: 231 FLEMREEAKERDHRKLGQELNLFA--IDETTGPGLPLYQPNGKRILDELADYAKQLNLDA 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P L +LW +SG Y++Y +M L D ND+ P + IF S Sbjct: 289 GYDPVETPHLFRTELWKKSGHYENYVDDMF-LLDVNDEEYGLKPMNCPGHATIFDQQSWS 347 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP +++ +R E R G+ R F + D + + P+ + N + + L Sbjct: 348 YRDLPVRYFEDGKVYRKEQRGELSGLSRVWSFTIDDGH-LFVRPDQIEDEINLIIDNILT 406 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 +F GL + A T + S + + DD Sbjct: 407 VFDTFGLDAEVALA------------------TRPDKSVGSDEIWEQAETQLRAVLDDSG 448 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I A Y D D+L ++ F ++ T+ Sbjct: 449 IDYGIEAGDGAFYGPKIDF---AFKDALGRKWDGPTVQLD----FNMPDRFD----LTYT 497 Query: 304 GADGKDHYV-QMGSYGIGAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G D +DH + G+ R +IE + Sbjct: 498 GEDNEDHQPVMIHRALYGSYERFFMVLIEHFNGKFPFWLAPEQVRILPI-------SDDQ 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +K+ L+ V +D +G + A P VIVG D + ++ R Sbjct: 551 IGYAKKLQYELND--FRVDIEDRSWTLGRKIREAQTDRVPYMVIVGGDEEEDGTISVRDR 608 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 +D+S+E ++ + R Sbjct: 609 KEREAKDVSVEAFRDHLRSEYDEKR 633 >gi|158422571|ref|YP_001523863.1| threonyl-tRNA synthetase [Azorhizobium caulinodans ORS 571] gi|158329460|dbj|BAF86945.1| threonyl-tRNA synthetase [Azorhizobium caulinodans ORS 571] Length = 636 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 150/443 (33%), Gaps = 40/443 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E RD ++ L + G+ W P G + + +R + Sbjct: 210 YLHRLEEAEKRDHRRLGREMDLF--HFQEEGPGVVFWHPKGWSLFQGLVSYMRRRL-KAD 266 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADR-----NDKAMIYGPTHEEVMTDIFRS 120 E++ P + LW SG + Y + M ++ +++ P + IF+ Sbjct: 267 YNEVNAPQVLDKSLWETSGHWGWYKENMFKVQSAGEETGDERVFALKPMNCPGHVQIFKH 326 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + R E G+MR R F DA+ F + + Sbjct: 327 GLKSYRDLPLRLAEFGAVHRYEPSGALHGLMRVRGFTQDDAHVFCTEEQMAAECLKIN-D 385 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L + G + I ++ + P S A+ ++V I +E+ Sbjct: 386 LILSTYADFGFEEITVKLSTRPEKRVGSDAVWDHAEDVMSRVL-------KQIEAESGGR 438 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 L A Y + L D++ + ++ FG Sbjct: 439 IKTGIL----PGEGAFYGPKFEY---TLSDAIGREWQCGTTQVDFNLPERFG-------- 483 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + ADG+ + G+M ++ G +W V ++ Sbjct: 484 AFYVDADGQKKTPVMIHRAICGSMERFTGILIEHFAGHFPLWLAPVQLAVCTIT------ 537 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 Q D ++ + + V D E+I + L P+Q +G K ++ V I Sbjct: 538 QEADDYAAEVASAARALDLKVELDTRNEKISYKVREHSLAKIPVQFALGKKEAAERTVSI 597 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + ++ + LEE + + Sbjct: 598 RRLGSQEQKVLPLEEALKLLADE 620 >gi|21428938|gb|AAM50188.1| GH20022p [Drosophila melanogaster] Length = 747 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 74/432 (17%), Positives = 147/432 (34%), Gaps = 40/432 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + I+ E + G E+ Sbjct: 342 EEAAKRDHRKIGREQELF--FFHELSPGSCFFQPRGAHIYNTLMGFIKAEYRKRGFQEVI 399 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + +A LW+ SG + Y + M +K P + IF + +S+R LP Sbjct: 400 SPNIYNAKLWMTSGHWQHYAENMFSFEAEKEK-FALKPMNCPGHCLIFDNRNRSWRELPL 458 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + ++ G Sbjct: 459 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEM-KGCLEFLKYVYTIFG 517 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + P E A+ + ++ Sbjct: 518 FSFQLV-LSTRPDNYLGELEQWNDAEK-----------------ALAESLNEFGMPWKEN 559 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + + ++ F +++L A K Sbjct: 560 PGDGAFYGPKIDI---TIMDALKRAHQCATIQLD----FQLPIRFNLSYIA---DDGEKK 609 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + +G++ + A++ + WP ++P ++ ++ + + + Sbjct: 610 RPVIIHRAILGSVERMIAILT---ENFAGKWPFWLSPRQVMVVPVGP---AYDQYAQSVR 663 Query: 370 ARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L G D D G+ + + A L F ++VG K S + V ++ R + + Sbjct: 664 DQLHDAGFMSEADCDAGDTMNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGE 723 Query: 429 MSLEEVINYASH 440 +S+ E+I Sbjct: 724 VSVAELITKLQK 735 >gi|24583839|ref|NP_723725.1| Threonyl-tRNA synthetase, isoform A [Drosophila melanogaster] gi|22946307|gb|AAF53166.2| Threonyl-tRNA synthetase, isoform A [Drosophila melanogaster] gi|211938559|gb|ACJ13176.1| FI05224p [Drosophila melanogaster] Length = 747 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 74/432 (17%), Positives = 147/432 (34%), Gaps = 40/432 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + I+ E + G E+ Sbjct: 342 EEAAKRDHRKIGREQELF--FFHELSPGSCFFQPRGAHIYNTLMGFIKAEYRKRGFQEVI 399 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + +A LW+ SG + Y + M +K P + IF + +S+R LP Sbjct: 400 SPNIYNAKLWMTSGHWQHYAENMFSFEAEKEK-FALKPMNCPGHCLIFDNRNRSWRELPL 458 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + ++ G Sbjct: 459 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEM-KGCLEFLKYVYTIFG 517 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + P E A+ + ++ Sbjct: 518 FSFQLV-LSTRPDNYLGELEQWNDAEK-----------------ALAESLNEFGMPWKEN 559 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + + ++ F +++L A K Sbjct: 560 PGDGAFYGPKIDI---TIMDALKRAHQCATIQLD----FQLPIRFNLSYIA---DDGEKK 609 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + +G++ + A++ + WP ++P ++ ++ + + + Sbjct: 610 RPVIIHRAILGSVERMIAILT---ENFAGKWPFWLSPRQVMVVPVGP---AYDQYAQSVR 663 Query: 370 ARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L G D D G+ + + A L F ++VG K S + V ++ R + + Sbjct: 664 DQLHDAGFMSEADCDAGDTMNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGE 723 Query: 429 MSLEEVINYASH 440 +S+ E+I Sbjct: 724 VSVAELITKLQK 735 >gi|283470478|emb|CAQ49689.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398] Length = 567 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 111/237 (46%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK D+ E Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSK-ESDYAANIEKA 236 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 75/231 (32%), Positives = 118/231 (51%), Gaps = 3/231 (1%) Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIV-EQWTAPYAATSDVHNEKLFDSLPENK 275 E +++ D + D +N V + E S Sbjct: 339 KEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGV 398 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD Sbjct: 399 AHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNHDD 458 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 GI+WP SV PF + LI+I R+ + +YA + DV +DD E+ G +F A Sbjct: 459 NGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEFNTK-FDVLYDDRQERAGVKFNDA 517 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 DL+G PL+++VG + S+ VE+K RLTG E++ +++++ ++++ N + Sbjct: 518 DLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDNLK 567 >gi|254730106|ref|ZP_05188684.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] Length = 213 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 148/210 (70%), Positives = 181/210 (86%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 4 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 63 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR + M++GPT+EE++TDIFRS Sbjct: 64 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQKREMLFGPTNEEMVTDIFRS 123 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 124 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 183 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 YLR F R+GL++IPMRA++GPIGGDLSHEF Sbjct: 184 YLRTFARVGLQAIPMRADTGPIGGDLSHEF 213 >gi|50310653|ref|XP_455348.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644484|emb|CAG98056.1| KLLA0F05918p [Kluyveromyces lactis] Length = 744 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 75/446 (16%), Positives = 160/446 (35%), Gaps = 42/446 (9%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L E RD + L ++ S G WLP G + + + ++R E + G Sbjct: 328 LKFLAEASMRDHRKIGREQELF--YFNEMSPGSCFWLPHGTRIYNTLVDLLRSEYRKRGY 385 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + ++ LW SG + +Y + M + P + +F++ +SYR Sbjct: 386 DEVITPNMYNSKLWETSGHWANYKENMFSFEVEKET-FGLKPMNCPGHCLMFKARERSYR 444 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP+ + R+E G+ R R F DA+ F + +F ++ Sbjct: 445 ELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTQDQIENE-IANIFDFLKYVY 503 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G EF + T + + + T Sbjct: 504 GVFG------------------FEFKMELSTRPEKYVGELETWNNAESKLETALKKWGGN 545 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS-LPMSATFKG 304 + A Y D+ + D+L + + ++ F ++ + +G Sbjct: 546 WELNPGDGAFYGPKIDIM---ISDALKRWHQCATIQLD----FQLPNRFELEFKTKELEG 598 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 +D + V + +G++ + A++ + WP ++P +I ++ + ++ Sbjct: 599 SDNYERPVMIHRAILGSVERMTAILT---EHFAGKWPFWLSPRQILVVPVGVK---FQEY 652 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ ++ + G D G + + +L + IVG + +++ V I++R Sbjct: 653 AQEVRDKMVEAGFYADVDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMTEKSVNIRNRDVM 712 Query: 425 IRE----DMSLEEVINYASHRFSNNR 446 + + ++ VIN S R Sbjct: 713 DLQGKNATVQVDAVINQLSKLKEEKR 738 >gi|332708267|ref|ZP_08428248.1| threonyl-tRNA synthetase [Lyngbya majuscula 3L] gi|332352932|gb|EGJ32491.1| threonyl-tRNA synthetase [Lyngbya majuscula 3L] Length = 605 Score = 217 bits (552), Expect = 4e-54, Method: Composition-based stats. Identities = 71/441 (16%), Positives = 147/441 (33%), Gaps = 39/441 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L G+ W P G + +++EQ + G + + Sbjct: 194 EALKRDHRKLGKELGLFI-FSDPVGPGLPLWTPKGTVLRTLLEDFLKQEQVKRGYLPVVT 252 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKA------MIYGPTHEEVMTDIFRSHIKSY 125 P + DL+ SG + +Y ++M + +++A + P + I++S ++SY Sbjct: 253 PHIGRVDLFKVSGHWQNYKEDMFPMMAEDEEAAAAEQGFVLKPMNCPFHIQIYKSELRSY 312 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 R LP + +R E G + D + P+ + + L +F Sbjct: 313 RELPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVMPDQLDQEFLSVVDLILSVF 372 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 L +K+ R D + S + + D + Sbjct: 373 KSLQMKNFKARLS--------------FRDPASDKYIGSDQAWEKAQSAIRRAVDTLGME 418 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + A Y D D L ++ ++ + Sbjct: 419 SFEAPGEAAFYGPKLDFI---FQDILDREWQLGTVQVDYNLP--------ERFDLEYVAE 467 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG + G++ + ++ + G +P +AP + L+ + Sbjct: 468 DGTRQRPIMIHRAPFGSLERLTGILI---EQYGGDFPFWLAPVQARLLPVG---DAQLPF 521 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ A++ G D GE++G A+ P+ +VG+K V + + I+ R G Sbjct: 522 AQEVAAKMRSHGIRAEVDTSGERLGKAIRNAEKAKIPVMSVVGAKEVEANSLNIRTRAAG 581 Query: 425 IREDMSLEEVINYASHRFSNN 445 M +++V+ N Sbjct: 582 ELGMMPIDQVVEKMEQANRNR 602 >gi|184155197|ref|YP_001843537.1| prolyl-tRNA synthase [Lactobacillus fermentum IFO 3956] gi|226701302|sp|B2GBM5|SYP_LACF3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|183226541|dbj|BAG27057.1| prolyl-tRNA synthase [Lactobacillus fermentum IFO 3956] Length = 573 Score = 217 bits (552), Expect = 4e-54, Method: Composition-based stats. Identities = 102/250 (40%), Positives = 147/250 (58%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P +E P DAE+ SHK+M+R G I+Q S G++++LPL + + + IIREE Sbjct: 1 MKQSQMLIPTQKEAPADAEVLSHKMMVRAGYIYQVSAGVWAYLPLAYRVIRKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM +P L ADLW ESGRY++YG + +L DR ++ I GPTHEE +T I R Sbjct: 61 MDKAGAVEMLLPGLLPADLWKESGRYEAYGDNLFKLKDRRERDFILGPTHEETVTSILRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQ+Q K+RDE RPR+G++R +EF M D YSF G +Y+ + Sbjct: 121 AIHSYKKLPLVVYQLQDKYRDEDRPRYGILRGKEFEMLDGYSFSADQAGLDQAYDLQAKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R+GL + A+SG +GG S EF A GE + + + T F Sbjct: 181 YRNIFDRIGLDYKVILADSGTMGGKNSQEFSAPAAIGEDVIAYTDGDYAANLEKATTKFT 240 Query: 241 DIISLNSIVE 250 + E Sbjct: 241 PTKQIGEEAE 250 Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats. Identities = 67/184 (36%), Positives = 98/184 (53%), Gaps = 2/184 (1%) Query: 261 DVHNEKLFDSLPEN-KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 D + ++ P+ GIE+GHIF GT YS AT +G+D + MG YGI Sbjct: 387 DFRTVQEGETAPDGLPIKFTNGIEIGHIFKLGTHYSEVFGATVLDQNGRDVPMIMGCYGI 446 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G R+++A+ E + D G++WP +VAPF I +I + A + E I A L + G +V Sbjct: 447 GVSRLLSAISEQNADENGLVWPQAVAPFDIHVIPVNAKKEDQMAMAEGITANLEEAGYEV 506 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 DD E+ G +FA ADL+G P++V VG K + VEIK R TG ++ EE+ + Sbjct: 507 LVDDRKERAGVKFADADLIGVPIRVTVGKK-AGEGIVEIKIRKTGETLEVHKEELATNIA 565 Query: 440 HRFS 443 Sbjct: 566 ILLK 569 >gi|154686074|ref|YP_001421235.1| prolyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42] gi|166980099|sp|A7Z4S8|SYP_BACA2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|154351925|gb|ABS74004.1| ProS [Bacillus amyloliquefaciens FZB42] Length = 564 Score = 217 bits (552), Expect = 4e-54, Method: Composition-based stats. Identities = 109/254 (42%), Positives = 154/254 (60%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +P L+E P DAE SHKL+LR G I Q++ G+YS++PL + + N+ I+REE Sbjct: 1 MRQSLTLIPTLREVPADAEAKSHKLLLRAGFIRQNTSGVYSYMPLAYRVIQNIQKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P LQ A+ W ESGR+ +YG E++RL DR+ + G THEEV+T + R Sbjct: 61 MEKINAVEMLMPALQQAETWQESGRWYTYGPELMRLKDRHGREFALGATHEEVITSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF + E + +Y M+ + Sbjct: 121 EVKSYKRLPLTLYQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHASEESLEETYQNMYGA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R L P+ A+SG +GG +HEF+ L++ GE + S Sbjct: 181 YSSIFARCELNVRPVIADSGAMGGKDTHEFMALSEIGEDTIAYSDGSSYAANTEMAEVVM 240 Query: 241 DIISLNSIVEQWTA 254 + + E Sbjct: 241 NSEPSDETPEALEK 254 Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 68/227 (29%), Positives = 122/227 (53%), Gaps = 4/227 (1%) Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 G+ +++ + + D N +E+ A A +D+ + D P+ K Sbjct: 340 GDIEIYADQAVKVMVNAVSGANEKDRHYRNVNIER-DASVKAYADLRIIQEGDPSPDGKG 398 Query: 277 VSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 GIEVG +F GT+YS M+AT+ +G+ + MG YGIG R ++A+ E HD Sbjct: 399 TIRFAEGIEVGQVFKLGTRYSEAMNATYLDENGRAQPMLMGCYGIGVSRTLSAIAEQHHD 458 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KG+IWP SVAP+ + ++ + ++ ++ E++Y + G +V +DD E+ G +FA Sbjct: 459 EKGLIWPKSVAPYDLHILALNMKNEAQKELAEQLYGKFQAEGYEVLYDDRAERAGVKFAD 518 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 +DL+G P+++ VG + + VE+K R TG ++S++E+ + + Sbjct: 519 SDLIGLPIRITVGKR-ADEGIVEVKIRKTGESAEVSVDELSEFIKTK 564 >gi|297571384|ref|YP_003697158.1| threonyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595] gi|296931731|gb|ADH92539.1| threonyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595] Length = 670 Score = 217 bits (552), Expect = 4e-54, Method: Composition-based stats. Identities = 63/451 (13%), Positives = 141/451 (31%), Gaps = 49/451 (10%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 I + RD +L L + + G+ + P G + R++ Sbjct: 252 RIAEAERRDHRKLGSELDLFS-FPDEIGSGLAVFHPKGGIIRMEMENYSRQKHIEGNYSF 310 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTD 116 ++ P + +L+ SG D Y M + P + + Sbjct: 311 VNTPHITKGNLFEVSGHLDFYADGMYPPMHMDEERDADGNITKQGADYYLKPMNCPMHNL 370 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 +++S +SYR LP ++ +R+E G+ R+R F DA+ + + Sbjct: 371 VYKSRGRSYRELPLRLFEFGTVYRNEASGVVHGLTRARGFTQDDAHIYCTRDQMKDEL-T 429 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 ++ L + GL + + + D + + Sbjct: 430 RLLTFVLDLLKDYGLDDFYLELST----------------KNPKKFVGDDDVWEESTRTL 473 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 + + A Y + + D+L ++S ++ F ++ Sbjct: 474 QEVAEASGLELVPDPEGAAFYGPKI---SVQAKDALGRTWQMSTIQLD----FNLPERFD 526 Query: 296 LPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + G DG+ H + G++ V+ + +P +AP ++ + + Sbjct: 527 ----LEYTGPDGERHRPVMIHRALFGSIERFFGVLT---EHYAGAFPAWLAPVQVRCVPV 579 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 D + + +L G V D ++ + A P +I G + + Sbjct: 580 A---DAFNDYLDSVADKLRAQGVRVEVDKSDDRFPKKIRNASKDKVPFTLIAGGEDMEAG 636 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + R ++++E + N+ Sbjct: 637 AVSFRMRDGSQDNGVAVDEAVARIVDHIRNH 667 >gi|332265242|ref|XP_003281637.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic isoform 2 [Nomascus leucogenys] Length = 713 Score = 217 bits (552), Expect = 4e-54, Method: Composition-based stats. Identities = 73/447 (16%), Positives = 151/447 (33%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + + + +E RD + L H S G +LP G + + IREE Sbjct: 296 KMMRNWEKSQEEAKNRDHRKIGKEQELF--FFHDLSPGSCFFLPRGAFIYNTLTDFIREE 353 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ E+ P + ++ LW SG + Y + M D P + +F Sbjct: 354 YHKRDFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIEKDT-FALKPMNCPGHCLMFAH 412 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R +P F + R+EL G+ R R F DA+ F + + Sbjct: 413 RPRSWREMPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQ-IEEEIKGCLQ 471 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G F + T + + + Sbjct: 472 FLQSVYSTFGFS------------------FQLNLSTRPENFLGEIEMWNEAEKQLQSSL 513 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D + A Y D+ K+ D++ + + ++ F +++L Sbjct: 514 MDFGEPWKMNPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPVRFNLTYV 566 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K V + +G++ + A++ + G WP ++P ++ +I + Sbjct: 567 SK--DGDDKKRPVIIHRAILGSVERMIAILS---ENYGGKWPFWLSPHQVMVIPVGP--- 618 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C ++ + + G D D + + A L + ++VG K ++ V + Sbjct: 619 ACEKYALQVSSEFFEEGFMADVDLDHNCTLNKKIRNAQLAQYNFILVVGEKEKVNNAVNV 678 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R I ++ + I+ + Sbjct: 679 RTRDNKIHGEILVTSAIDKLKNLKKTR 705 >gi|258423896|ref|ZP_05686781.1| prolyl-tRNA synthetase [Staphylococcus aureus A9635] gi|257845925|gb|EEV69954.1| prolyl-tRNA synthetase [Staphylococcus aureus A9635] Length = 567 Score = 217 bits (552), Expect = 4e-54, Method: Composition-based stats. Identities = 111/237 (46%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L+ G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK D+ E Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSK-ESDYAANIEKA 236 Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats. Identities = 71/188 (37%), Positives = 110/188 (58%), Gaps = 4/188 (2%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D + L + V+ GIEVG +F GTKYS M+ATF GK + MG YG Sbjct: 382 DFRFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYG 441 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R ++A++E +HD GI+WP SV PF + LI+I R+ E +YA + D Sbjct: 442 IGISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELAEALYAEFNTK-FD 500 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V +DD E+ G +F ADL+G PL+++VG + S+ VE+K RLTG E++ +++++ Sbjct: 501 VLYDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVI 559 Query: 439 SHRFSNNR 446 ++++ N + Sbjct: 560 TNKYDNLK 567 >gi|227504819|ref|ZP_03934868.1| prolyl-tRNA synthetase [Corynebacterium striatum ATCC 6940] gi|227198669|gb|EEI78717.1| prolyl-tRNA synthetase [Corynebacterium striatum ATCC 6940] Length = 591 Score = 217 bits (552), Expect = 4e-54, Method: Composition-based stats. Identities = 105/283 (37%), Positives = 154/283 (54%), Gaps = 4/283 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G + + + G+Y+WLPLG + L + I+REE Sbjct: 4 RLSNLFLRTLREDPADAEVLSHKLLVRAGYVRRAAPGVYTWLPLGLRTLTKIENIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G EM P L + + + R+ YG + RL DR M+ GPTHEE+ + Sbjct: 64 NAIGGQEMLFPALLPREPYELTDRWTEYGDNLFRLKDRKGADMLLGPTHEEMFAGAVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSFD+T EG SY + +Y Sbjct: 124 YSSYKDFPVTLYQIQTKYRDEERPRAGILRGREFVMKDSYSFDMTDEGLDESYMRHRKAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN--TDF 239 IF+RL + +A SG +GG S EF+ ++ GE F D+ E T Sbjct: 184 QNIFNRLEIDYAICKATSGAMGGSASEEFLAVSPAGE-DTFVRATEGDYAANVEAVVTPA 242 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 + L + E S+ + + + E +V++R + Sbjct: 243 PEETPLEGLAEA-KVYETPDSETIDTLVEWANSEGIQVNSRAV 284 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 6/207 (2%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLP 297 + + + V + K D P RGIE+GHIF G KY+ Sbjct: 387 EKNHHVVNCVAGRDFEVDEFIEAAEIKEGDPAPGGMGTLTLERGIELGHIFQLGRKYTKA 446 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 +GK MGSYGIG R++A + E D KG+ WP VAPF++ + Sbjct: 447 FDVQILDENGKRAVPTMGSYGIGVSRMMAVLAEQQADEKGLRWPVDVAPFQVHVAVAN-K 505 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D +A +K+ L G +V +DD G +F A+LLG P I+G + +D + Sbjct: 506 DAAALEAGQKLVEDLDAAGIEVLFDDRPKVSPGVKFKDAELLGMPFIAILG-RSFADGII 564 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E++ R G ++ +E+++ Sbjct: 565 ELRIRG-GETLEVPADEIVDKLLELVR 590 >gi|94985607|ref|YP_604971.1| threonyl-tRNA synthetase [Deinococcus geothermalis DSM 11300] gi|123079875|sp|Q1IY82|SYT_DEIGD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|94555888|gb|ABF45802.1| threonyl-tRNA synthetase [Deinococcus geothermalis DSM 11300] Length = 649 Score = 217 bits (552), Expect = 4e-54, Method: Composition-based stats. Identities = 70/447 (15%), Positives = 148/447 (33%), Gaps = 40/447 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +Y + + RD +L L +I KG+ WLP G + + +RE+Q + Sbjct: 236 EYLERLEEARRRDHRKLGRELELF--LIDPLVGKGLPMWLPNGTVLREELTRFLREQQFQ 293 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 + P + + DL+ SG Y Y +++ + P + I+ S + Sbjct: 294 RDYQGVVTPNIGNLDLFRTSGHYPYYSDSQFEPLSVDEEQYMLKPMNCPFHIRIYASKPR 353 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + +R E+ G+ R R F DA+ F + K + + + Sbjct: 354 SYRDLPVRLAEFGTVYRYEMSGELNGLTRVRGFTQDDAHIFARPDQLKKE-FLDVLDLTV 412 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + G+ + R + + D + + +++ Sbjct: 413 LVLKTFGMNDVRFR--------------VGVRDPASDKYVGDPAQWEVAERQIIEAVEEV 458 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 ++ A Y D + D L ++ ++ T+ Sbjct: 459 GLPYTVEPGDAAFYGPKLDF---VVKDVLGREWQLGTIQVDYNLP--------ERFDLTY 507 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G DG++H + G++ ++ + G W I + Sbjct: 508 TGEDGQEHRPVMIHRAPFGSLERFVGILIEHYGGDFPFWLAPRQIMLIPIA------DRH 561 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + G DD ++ ++ A+L P+ +IVG + + +V ++ R Sbjct: 562 NAYAQTLANEFKAAGLRAEVDDSNNRMNAKVRNAELHKIPVMLIVGDQEEARREVSVRER 621 Query: 422 ---LTGIREDMSLEEVINYASHRFSNN 445 R+ + ++ R+ Sbjct: 622 TPEGHKERKGVDFTALLAELQERYRTR 648 >gi|308173620|ref|YP_003920325.1| prolyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7] gi|307606484|emb|CBI42855.1| prolyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7] gi|328553448|gb|AEB23940.1| prolyl-tRNA synthetase [Bacillus amyloliquefaciens TA208] gi|328911761|gb|AEB63357.1| prolyl-tRNA synthetase [Bacillus amyloliquefaciens LL3] Length = 564 Score = 217 bits (552), Expect = 4e-54, Method: Composition-based stats. Identities = 109/254 (42%), Positives = 154/254 (60%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +P L+E P DAE SHKL+LR G I Q++ G+YS++PL + + N+ I+REE Sbjct: 1 MRQSLTLIPTLREVPADAEAKSHKLLLRAGFIRQNTSGVYSYMPLAYRVIQNIQKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P LQ A+ W ESGR+ +YG E++RL DR+ + G THEEV+T + R Sbjct: 61 MEKINAVEMLMPALQQAETWQESGRWYTYGPELMRLKDRHGREFALGATHEEVITSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF + E + +Y M+ + Sbjct: 121 EVKSYKRLPLTLYQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHASEESLEETYQNMYGA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R L P+ A+SG +GG +HEF+ L++ GE + S Sbjct: 181 YSSIFARCELNVRPVIADSGAMGGKDTHEFMALSEIGEDTIAYSDGSSYAANTEMAEVVM 240 Query: 241 DIISLNSIVEQWTA 254 + + E Sbjct: 241 NTEPSDEKPEALEK 254 Score = 169 bits (428), Expect = 8e-40, Method: Composition-based stats. Identities = 69/227 (30%), Positives = 122/227 (53%), Gaps = 4/227 (1%) Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 G+ +++ + + D N +E+ A A +D+ + D P+ K Sbjct: 340 GDIEIYADQAVKVMVNAVSGANEKDRHYRNVNIER-DASVKAYADLRIIQEGDPSPDGKG 398 Query: 277 VSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 GIEVG +F GT+YS M+AT+ +G+ + MG YGIG R ++A+ E HD Sbjct: 399 TIRFAEGIEVGQVFKLGTRYSEAMNATYLDENGRAQPMLMGCYGIGVSRTLSAIAEQHHD 458 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 KG+IWP SVAP+ + ++ + ++ ++ EK+Y + G +V +DD E+ G +FA Sbjct: 459 EKGLIWPKSVAPYDLHILALNMKNEAQKELAEKLYGKFQAEGYEVLYDDRAERAGVKFAD 518 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 +DL+G P+++ VG + + VE+K R TG ++S++E+ + + Sbjct: 519 SDLIGLPIRITVGKR-ADEGIVEVKIRKTGESAEVSVDELSEFIKTK 564 >gi|62261354|gb|AAX77983.1| unknown protein [synthetic construct] Length = 600 Score = 217 bits (552), Expect = 4e-54, Method: Composition-based stats. Identities = 113/333 (33%), Positives = 188/333 (56%), Gaps = 6/333 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+PLG K L + I+R+E Sbjct: 27 MKATQTLIATTKELPKEAVLISHQYMLKAGLIKKLASGIYTWMPLGLKVLQKIQNIVRDE 86 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 87 MNKAGASELLLPSILPSELLQETHRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARD 146 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + +++YN M+ + Sbjct: 147 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYAT 206 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y I ++GL P++A++G IGGD SHEF VLA+ GE + C + D+ E Sbjct: 207 YCNILDKIGLAYRPVKADTGAIGGDNSHEFQVLANAGE-DIICYSNGSDYAANIELATYA 265 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 +D ++ + +E+ P T + +++ + + + G+ F + Sbjct: 266 KSDLSKRVNSQNTIEKIHTPNIKTIEKLCKEMSFDIKKTIKTMVIKDAGGNFFALVIRGD 325 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAV 328 ++ T + + + A Sbjct: 326 HELNETKINKLDQIIAPYTLATKEEIFSIFNAN 358 Score = 152 bits (385), Expect = 8e-35, Method: Composition-based stats. Identities = 69/183 (37%), Positives = 103/183 (56%), Gaps = 3/183 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ K GIEVGHIF YS PM+A G DGK + MG Y Sbjct: 409 ADIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCY 468 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVG 376 G G RV+AA IE SHD GIIWP+S+AP++++++ I ++ +K+Y L G Sbjct: 469 GFGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKIKEVADKLYQDLLGDG 528 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD G + G FA ADL+G+ V++G + + +E K+R T ++++++ E+I Sbjct: 529 IDVLLDDRGARPGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITIAELIK 588 Query: 437 YAS 439 Sbjct: 589 ILK 591 >gi|260757796|ref|ZP_05870144.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] gi|260668114|gb|EEX55054.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] Length = 210 Score = 217 bits (552), Expect = 4e-54, Method: Composition-based stats. Identities = 148/210 (70%), Positives = 181/210 (86%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFLPIL+ENP++AEI SH+LMLR+GMI Q S GIYSWLP+G K L+ V IIREE Sbjct: 1 MRLSRYFLPILKENPKEAEIVSHRLMLRSGMIRQQSAGIYSWLPIGLKVLNKVCTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 QNR GA E+ +PT+QSADLW ESGRYD+YGKEMLR+ DR + M++GPT+EE++TDIFRS Sbjct: 61 QNRAGANEILMPTIQSADLWRESGRYDAYGKEMLRIQDRQKREMLFGPTNEEMVTDIFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +++SY++LP Y IQ KFRDE+RPRFGVMRSREFLMKDAYSFDL EG+K +Y +MFVS Sbjct: 121 YVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKMAYYRMFVS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 YLR F R+GL++IPMRA++GPIGGDLSHEF Sbjct: 181 YLRTFARVGLQAIPMRADTGPIGGDLSHEF 210 >gi|320104617|ref|YP_004180208.1| prolyl-tRNA synthetase [Isosphaera pallida ATCC 43644] gi|319751899|gb|ADV63659.1| prolyl-tRNA synthetase [Isosphaera pallida ATCC 43644] Length = 595 Score = 217 bits (552), Expect = 4e-54, Method: Composition-based stats. Identities = 118/261 (45%), Positives = 156/261 (59%), Gaps = 1/261 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK +P L+E P A SH+L+L+ GMI Q G Y++LPLG + L+ + AI+R+ Sbjct: 1 MRWSKALIPTLKEAPAGAVAPSHQLLLKAGMIRQLGSGAYTYLPLGWRVLNKIVAIVRKG 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA EM +P LQ +LW E+GRY ++G +++L D+ M GPTHEEV+TD+ R Sbjct: 61 MDDAGAQEMLMPALQPVELWKETGRYQTFGDLLMQLKVGGDQTMALGPTHEEVVTDLARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP T YQIQ KFRDE RPRFGV+R+REFLMKDAYSFD + SY+ M+ + Sbjct: 121 LIKSYRQLPMTLYQIQTKFRDEPRPRFGVLRTREFLMKDAYSFDANLDQLNQSYDAMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF G+ + + AESGPIGGD SHEF+V A GE + + E Sbjct: 181 YQRIFDECGIPYVVVEAESGPIGGDSSHEFMVPASIGEDVIL-QCPASGYAANVERAAVG 239 Query: 241 DIISLNSIVEQWTAPYAATSD 261 + A A + Sbjct: 240 ALKLPTQTERVARAAVAPPFE 260 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 69/191 (36%), Positives = 102/191 (53%), Gaps = 2/191 (1%) Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 L +V P +D+ N D P + RGIEVGH+F GTKYS M AT Sbjct: 371 HLTGVVPGRDFPLDRVADLRNAVAGDPCPLSGQPMIETRGIEVGHVFKLGTKYSKAMGAT 430 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 F G + MG YGIG R++AA +E+ HD GI+WP ++AP+++ LI +K + Sbjct: 431 FLDETGTAQDIIMGCYGIGINRILAAAVEALHDAHGIVWPLAIAPYEVILIPLKVSNPDL 490 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E + L+ G DV DD Q G +F ADL+G PL+V++G + + + K+E+K R Sbjct: 491 MAVVETLERELAAAGIDVLTDDRDHQPGFKFKDADLIGIPLRVVIGERGLKEGKLELKWR 550 Query: 422 LTGIREDMSLE 432 + + +E Sbjct: 551 HEKEADSIPVE 561 >gi|294790871|ref|ZP_06756029.1| threonine--tRNA ligase [Scardovia inopinata F0304] gi|294458768|gb|EFG27121.1| threonine--tRNA ligase [Scardovia inopinata F0304] Length = 685 Score = 217 bits (552), Expect = 4e-54, Method: Composition-based stats. Identities = 69/459 (15%), Positives = 142/459 (30%), Gaps = 50/459 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L L+E RD ++ L + + G+ + P G ++ + R E + Sbjct: 244 KAYLQRLEEAAKRDHRKLGAEMDLFS-FPDEIGPGLAVFHPKGAAVINAMKEYSRIEHRK 302 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHE 111 + P + L+ SG Y M R P + Sbjct: 303 NHYSFVQTPHITKGGLYETSGHLQWYKDGMYPPMHLDEEKDANGKVIREGFDYYLKPMNC 362 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 363 PMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDSHIYCTREQMK 422 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L++ GL + + E + S + + Sbjct: 423 GEL-TSLLSFVLKLLKDFGLNDFYLELST----------------KDEHKYVGSDEIWEE 465 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + D A Y + + D+L ++S ++ F Sbjct: 466 ATRTLAEVARDSGLDLVDDPGGAAFYGPKI---SVQARDALGRTWQLSTIQLDFNLPERF 522 Query: 291 GTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 G + ADG + GA+ A++ + G W V + Sbjct: 523 G--------LEYIAADGTRQRPVMIHRALFGAIERFFAILLEHYAGAFPAWLAPVQVLGV 574 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 + + D ++I RL + D ++ G + A P +IVG Sbjct: 575 PV------SEANSDYLKEILDRLDESLVRCEMDASDDRFGKKIRNASKSKTPFILIVGDD 628 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 + V + R ++++ + + + ++++ + Sbjct: 629 DQARGAVSFRFRDGSQLNGVAVDNALAWINQAITSHQQI 667 >gi|185179115|ref|ZP_02964840.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024051|ref|ZP_02996803.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518364|ref|ZP_03003871.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|225551314|ref|ZP_03772260.1| threonine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|184209012|gb|EDU06055.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188019085|gb|EDU57125.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188998237|gb|EDU67334.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|225379129|gb|EEH01494.1| threonine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] Length = 580 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 157/444 (35%), Gaps = 34/444 (7%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + + RD L L T + +G+ WLP G V I E + + Sbjct: 168 YLVDLQERKERDHRKIGKDLNLFT-FNNLAGQGLPIWLPNGTIIKSQVQKFINEVEFQFN 226 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P L S DL+ SG +D Y + +++ +I P T ++ + ++SY Sbjct: 227 FDTVITPILGSIDLYKTSGHWDHYKDNIFSPVQIDNEVLILRPMTCPHHTLVYSNELRSY 286 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R E G R RE +++D + F + F Sbjct: 287 RSLPIRLSEHSILHRYESSGGLTGFERVREMILEDCHVFCRPDQIEHE-VINAFKMIQEA 345 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK-DFMDFPIPSENTDFDDII 243 LG+K+ + D + + + + + D Sbjct: 346 QEGLGIKTFEIHLSLN--------------DPNDKEKYYDDPQMWEHSQNTLRKMLKDHK 391 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y D + + L VS ++ F ++ + ++ Sbjct: 392 IPYKEMVGEAAFYGPKIDFQVKTV---LNRIITVSTIQLD----FLLPNRF----NLSYI 440 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + M IG + ++ + + P ++P ++ +I + + + D Sbjct: 441 NENNEQSTPVMIH--IGIIGTYERLLAILLEQTKGVLPLWLSPVQVVIIPVNEN--LHAD 496 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK-VEIKHRL 422 +++ A+L K D E++ + A + P Q++VG + + + K V + Sbjct: 497 YAKELNAKLRKHLVRSSLDLRNERLSKKIREAQIQKIPYQIVVGDEEIKNDKMVTYRRYG 556 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 + +S+++ I + + + Sbjct: 557 SEETTTVSVDDFIKVLENDIRSKK 580 >gi|73951037|ref|XP_536172.2| PREDICTED: similar to threonyl-tRNA synthetase-like 2 isoform 1 [Canis familiaris] Length = 802 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 75/447 (16%), Positives = 153/447 (34%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD + L H S G +LP G + + IREE Sbjct: 385 KMMKTWEKFQEEAKNRDHRKVGKEQELF--FFHDLSPGSCFFLPRGAFIYNTLMDFIREE 442 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R E+ P + ++ LW SG + Y + M D P + +F Sbjct: 443 YHRRNFTEVLSPNMFNSKLWETSGHWQHYSENMFTF-DIEKDTFALKPMNCPGHCLMFAH 501 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R +P + R+EL G+ R R F DA+ F + + Sbjct: 502 RPRSWREMPVRLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQ-IEEEIKGCLQ 560 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G F + T + D Sbjct: 561 FLQSVYSTFGFS------------------FQLNLSTRPENFLGEVELWDEAEKQLQNSL 602 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + A Y D+ K+ D++ + + ++ F +++L Sbjct: 603 VEFGKPWKMNPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRFNLTYV 655 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K + V + +G++ + A++ + G WP ++P ++ +I + Sbjct: 656 SK--DGDDKRNPVIIHRAILGSVERMIAILS---ENYGGKWPFWLSPRQVMVIPVGP--- 707 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C ++ + + G D D + + A L + ++VG K +++ V + Sbjct: 708 TCEKYALQVSSAFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKTNNAVNV 767 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R I ++S+ I+ + + Sbjct: 768 RTRDNKIHGEISVTSAIHKLKNLKKSR 794 >gi|333024111|ref|ZP_08452175.1| putative prolyl-tRNA synthetase [Streptomyces sp. Tu6071] gi|332743963|gb|EGJ74404.1| putative prolyl-tRNA synthetase [Streptomyces sp. Tu6071] Length = 563 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 111/269 (41%), Positives = 154/269 (57%), Gaps = 4/269 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE SHKL++R G + + + GI+SWLPLG+K LDN++ I+REE Sbjct: 6 RMSRLMVKTLRDDPADAETLSHKLLVRAGYVRRTAAGIWSWLPLGKKVLDNISQIVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + SGR++ YG + RL DR + GPTHEE+ T + + Sbjct: 66 DAIGAQEVLLPALLPREPYEASGRWEEYGDLLFRLKDRKGADYLLGPTHEEIFTQVVKDQ 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQ+Q K+RDE RPR GV+R REF+MKD+YSFD T EG SY +Y Sbjct: 126 CTSYKDLPVMLYQVQTKYRDEARPRSGVLRGREFVMKDSYSFDTTDEGLAESYALHREAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +IF RLGL + A SG +GG S EF+ A GE F F +E F Sbjct: 186 RKIFARLGLDYRIVSAVSGAMGGSASEEFLAPAAAGE-DTFADCPNCGFAANTEAVTFKG 244 Query: 242 I---ISLNSIVEQWTAPYAATSDVHNEKL 267 S + VE+ P T + E L Sbjct: 245 AAMDGSAHGPVEELDTPDTPTIESLAEHL 273 Score = 137 bits (345), Expect = 4e-30, Method: Composition-based stats. Identities = 64/177 (36%), Positives = 89/177 (50%), Gaps = 6/177 (3%) Query: 266 KLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 + D P + R IE+GHIF G KY+ G +GK V MGSYGIG R Sbjct: 389 EEGDPCPNCGQGLHLDRAIEIGHIFQLGRKYADTFQLDVLGQNGKPVRVTMGSYGIGVSR 448 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 VAA+ E + D KG+ WP VAP + + A + + +I +L+ G V DD Sbjct: 449 AVAALAEQTADDKGLCWPAEVAPADVH--VVAAGKVLQTELALEIADKLAAAGARVLVDD 506 Query: 384 M-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 G G +F A+L+G P VI G + VE+K R TG RE++S+EE + + Sbjct: 507 RAGVSPGVKFTDAELIGVPKTVIAGRRSAE-GIVELKDRRTGEREELSVEEAVARLT 562 >gi|302522218|ref|ZP_07274560.1| prolyl-tRNA synthetase [Streptomyces sp. SPB78] gi|302431113|gb|EFL02929.1| prolyl-tRNA synthetase [Streptomyces sp. SPB78] Length = 563 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 111/269 (41%), Positives = 154/269 (57%), Gaps = 4/269 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE SHKL++R G + + + GI+SWLPLG+K LDN++ I+REE Sbjct: 6 RMSRLMVKTLRDDPADAETLSHKLLVRAGYVRRTAAGIWSWLPLGKKVLDNISQIVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + SGR++ YG + RL DR + GPTHEE+ T + + Sbjct: 66 DAIGAQEVLLPALLPREPYEASGRWEEYGDLLFRLKDRKGADYLLGPTHEEIFTQVVKDQ 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQ+Q K+RDE RPR GV+R REF+MKD+YSFD T EG SY +Y Sbjct: 126 CTSYKDLPVMLYQVQTKYRDEARPRSGVLRGREFVMKDSYSFDTTDEGLAESYALHREAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +IF RLGL + A SG +GG S EF+ A GE F F +E F Sbjct: 186 RKIFARLGLDYRIVSAVSGAMGGSASEEFLAPAAAGE-DTFADCPNCGFAANTEAVTFKG 244 Query: 242 I---ISLNSIVEQWTAPYAATSDVHNEKL 267 S + VE+ P T + E L Sbjct: 245 AAVDGSAHGPVEELDTPDTPTIESLAEHL 273 Score = 137 bits (345), Expect = 4e-30, Method: Composition-based stats. Identities = 63/177 (35%), Positives = 89/177 (50%), Gaps = 6/177 (3%) Query: 266 KLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 + D P + R IE+GHIF G KY+ G +GK V MGSYGIG R Sbjct: 389 EEGDPCPNCGQGLHLDRAIEIGHIFQLGRKYADTFQLDVLGQNGKPVRVTMGSYGIGVSR 448 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 VAA+ E + D KG+ WP V+P + + A + + +I +L+ G V DD Sbjct: 449 AVAALAEQTADDKGLCWPAEVSPADVH--VVAAGKVLQTELALEIADKLAAAGARVLVDD 506 Query: 384 M-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 G G +F A+L+G P VI G + VE+K R TG RE++S+EE + + Sbjct: 507 RAGVSPGVKFTDAELIGVPKTVIAGRRSAE-GIVELKDRRTGEREELSVEEAVARLT 562 >gi|25013040|gb|AAN71609.1| RH56418p [Drosophila melanogaster] gi|220950596|gb|ACL87841.1| Aats-thr-PB [synthetic construct] Length = 711 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 74/432 (17%), Positives = 147/432 (34%), Gaps = 40/432 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + I+ E + G E+ Sbjct: 306 EEAAKRDHRKIGREQELF--FFHELSPGSCFFQPRGAHIYNTLMGFIKAEYRKRGFQEVI 363 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + +A LW+ SG + Y + M +K P + IF + +S+R LP Sbjct: 364 SPNIYNAKLWMTSGHWQHYAENMFSFEAEKEK-FALKPMNCPGHCLIFDNRNRSWRELPL 422 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + ++ G Sbjct: 423 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEM-KGCLEFLKYVYTIFG 481 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + P E A+ + ++ Sbjct: 482 FSFQLV-LSTRPDNYLGELEQWNDAEK-----------------ALAESLNEFGMPWKEN 523 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + + ++ F +++L A K Sbjct: 524 PGDGAFYGPKIDI---TIMDALKRAHQCATIQLD----FQLPIRFNLSYIA---DDGEKK 573 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + +G++ + A++ + WP ++P ++ ++ + + + Sbjct: 574 RPVIIHRAILGSVERMIAILT---ENFAGKWPFWLSPRQVMVVPVGP---AYDQYAQSVR 627 Query: 370 ARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L G D D G+ + + A L F ++VG K S + V ++ R + + Sbjct: 628 DQLHDAGFMSEADCDAGDTMNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGE 687 Query: 429 MSLEEVINYASH 440 +S+ E+I Sbjct: 688 VSVAELITKLQK 699 >gi|170575688|ref|XP_001893343.1| threonyl-tRNA synthetase, cytoplasmic [Brugia malayi] gi|158600735|gb|EDP37841.1| threonyl-tRNA synthetase, cytoplasmic, putative [Brugia malayi] Length = 685 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 64/433 (14%), Positives = 137/433 (31%), Gaps = 42/433 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD L H S G W P G + + IR+E + G E+ Sbjct: 275 EEAAKRDHRKIGRDQELY--FFHPLSPGSAFWYPKGAHIYNTLCNFIRKEYRKRGFTEVI 332 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + ++ LW +SG ++ Y M + D + P + ++ +++ LP Sbjct: 333 SPNMYNSKLWEQSGHWEHYSDNMFK-IDIEKETFGLKPMNCPGHCLMYSHMPRTHNELPL 391 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + + R+E+ G+ R R F DA+ F + + + + Sbjct: 392 RYADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCRQDQVVEE-IMGCIDFLKYAYLDVF 450 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + + P E + + + + Sbjct: 451 GFTFKLNLSTRP----------------EVGYLGDIETWNAAEDKLREALNASGHKWELN 494 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + + ++ F ++ ++ + + Sbjct: 495 PGDGAFYGPKIDI---TIQDALRRLHQCATIQLD----FQLPVRFD----LSYFDENNER 543 Query: 310 HYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 M + R+ A + E+ A + D K Sbjct: 544 QRPVMIHRALLGSIERMTAILAENYGGKWPFWLSPRQAKVITV-------HESQNDYGRK 596 Query: 368 IYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + + + G +V +D D + + Q A + F ++VG + V ++ R +R Sbjct: 597 VQQEIYEAGFEVEFDVDSSDTLNKQIRNAQIAQFNFILVVGPAEARNGTVNVRTRDNAVR 656 Query: 427 EDMSLEEVINYAS 439 ++ LE++I Sbjct: 657 GEVKLEDLIEKFK 669 >gi|323342132|ref|ZP_08082365.1| threonine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464557|gb|EFY09750.1| threonine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 596 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 144/442 (32%), Gaps = 40/442 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+ RD + +L L M+ + G WLP G ++ + G Sbjct: 185 YLEWLEAAKARDHKKLGKELELF--MMSEFGPGFPFWLPNGMTLRHALDEYYYNAHIKRG 242 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + PT+ + +LW SG +++Y + M +D+ P + ++++ + SY Sbjct: 243 YVFTQTPTMLNKELWEVSGHWENYRENMYTST-IDDREFAIKPMNCPGGMLVYKNGLHSY 301 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP ++ R E G+ R R F DA+ F + + I Sbjct: 302 RDLPIRLAEMGHVHRHEASGALNGLFRVRSFTQDDAHLFMREDQLQDEIVE-ILDFINEI 360 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + GL + P E + D D + Sbjct: 361 YSTFGLSYSI-ELSTRP----------------EDKYIGDIDVWDRSEQALKEACMAAGV 403 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D K+ DSL + +++ T+ Sbjct: 404 DFKINEGDGAFYGPKLDF---KVRDSLNRVWQCGTVQLDMNLP--------ERFDLTYVA 452 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DGK + G++ ++ G +W + I + + D Sbjct: 453 EDGKKKRPIMLHRAIFGSIERFIGILIEHFAGGFPLW-----MAPKQIEIIPVNTEFHMD 507 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ L + G D E++G + A PLQ+I+G + + D V ++ Sbjct: 508 YANEVCDLLLEKGIRAHVDGRNEKLGYRLREAQKNKIPLQLIIGDQEIEDRSVNVRRYGE 567 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + L+ + + S Sbjct: 568 RAQNPFDLDVFMQMVENEISTR 589 >gi|28378679|ref|NP_785571.1| prolyl-tRNA synthetase [Lactobacillus plantarum WCFS1] gi|254556877|ref|YP_003063294.1| prolyl-tRNA synthetase [Lactobacillus plantarum JDM1] gi|300768192|ref|ZP_07078097.1| proline--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180820|ref|YP_003924948.1| prolyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum ST-III] gi|81840975|sp|Q88VK1|SYP_LACPL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|28271515|emb|CAD64420.1| proline--tRNA ligase [Lactobacillus plantarum WCFS1] gi|254045804|gb|ACT62597.1| prolyl-tRNA synthetase [Lactobacillus plantarum JDM1] gi|300494256|gb|EFK29419.1| proline--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046311|gb|ADN98854.1| prolyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 569 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 106/235 (45%), Positives = 146/235 (62%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE SH++MLR G I Q S G+Y++LPL + L N+ IIR+E Sbjct: 1 MKQSKLLIPTLKEVPNDAEALSHQMMLRAGYIRQISAGMYAYLPLAYRVLTNIEKIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A EM VP + A+LW +GRY++YG E+ +L +R+D+ I GPTHEE T I R Sbjct: 61 MEKIDAAEMLVPAVIPAELWKATGRYETYGPELFKLKNRHDREFILGPTHEETFTSIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ K+RDE RPR+G++R REF+MKDAYSF ++ M + Sbjct: 121 EIKSYKRLPLTLYQIQAKYRDEDRPRYGLLRGREFIMKDAYSFHADEASLDDTFQDMAQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R+GLK + + G +GG S E+ +A GE + S D+ E Sbjct: 181 YQNIFERVGLKFRSIIGDGGAMGGKDSREYSAIAPVGEDTIVYSD-ASDYAANLE 234 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 110/207 (53%), Gaps = 3/207 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLP 297 +D ++ + A D+ + + P+ V +GIE+GHIF GT+YS Sbjct: 362 EDGHHFTNVNPERDFHAEAYVDIRFVQEGELSPDGAGVLKFTKGIEIGHIFKLGTRYSKD 421 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + A A+G++ V MG YGIG R+++A+ E D G+IWP ++APF + +I + Sbjct: 422 LHAEVLDANGRNIPVIMGCYGIGVSRLLSAIAEQRADENGLIWPKAIAPFDVHVIPVNPK 481 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + +++ A+L G +V +DD E+ G +FA +DL+G P ++ +G K S+ VE Sbjct: 482 KADQVEVADQVEAQLEAAGYNVLYDDRKERPGVKFADSDLMGIPARITIGKK-ASEGIVE 540 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSN 444 IK R TG ++ EE+ N + N Sbjct: 541 IKLRQTGETLEVKQEEIANNLAVLLKN 567 >gi|118095671|ref|XP_413774.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 903 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 74/441 (16%), Positives = 152/441 (34%), Gaps = 43/441 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H S G +LP G + + IREE +R E+ Sbjct: 496 EEARNRDHRKIGKEQELF--FFHDLSPGSCFFLPRGAFLYNTLTDFIREEYHRRNFTEVV 553 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + ++ LW SG + Y + M + P + +F +S+R +P Sbjct: 554 SPNIFNSKLWETSGHWQHYSENMFSFEIEKET-FALKPMNCPGHCLMFAHRPRSWREMPL 612 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ + + + ++ G Sbjct: 613 RLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIYCTIEQ-IEEEIKGCLDFLKSVYSIFG 671 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 F + T + D D+ ++ Sbjct: 672 FT------------------FQLHLSTRPENYLGELEIWDHAEKQLQNSLDNFGVQWTLN 713 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ K+ D+L + + ++ F ++ + T+ G DG D Sbjct: 714 PGDGAFYGPKIDI---KIKDALGRYHQCATIQLD----FQLPIRF----NLTYVGKDGDD 762 Query: 310 --HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 V + +G++ + A++ + G WP ++P ++ ++ + + + ++ Sbjct: 763 KKRPVIIHRAVLGSVERMIAILA---ENYGGKWPFWLSPRQVMVVPVGPTSE---EYAQQ 816 Query: 368 IYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + + + G D D + + A L + ++VG K ++ V ++ R + Sbjct: 817 VCSEFFEAGFMSDVDLDQSCTLNKKIRNAQLAQYNFILVVGEKEKANHAVNVRTRDNKVH 876 Query: 427 EDMSLEEVINYASHRFSNNRP 447 ++S+ I S P Sbjct: 877 GEISVSSAIEKLKKFKSLRLP 897 >gi|227874914|ref|ZP_03993066.1| proline--tRNA ligase [Mobiluncus mulieris ATCC 35243] gi|269976484|ref|ZP_06183469.1| prolyl-tRNA synthetase [Mobiluncus mulieris 28-1] gi|306818238|ref|ZP_07451968.1| proline--tRNA ligase [Mobiluncus mulieris ATCC 35239] gi|307701739|ref|ZP_07638753.1| proline--tRNA ligase [Mobiluncus mulieris FB024-16] gi|227844491|gb|EEJ54648.1| proline--tRNA ligase [Mobiluncus mulieris ATCC 35243] gi|269935285|gb|EEZ91834.1| prolyl-tRNA synthetase [Mobiluncus mulieris 28-1] gi|304648977|gb|EFM46272.1| proline--tRNA ligase [Mobiluncus mulieris ATCC 35239] gi|307612997|gb|EFN92252.1| proline--tRNA ligase [Mobiluncus mulieris FB024-16] Length = 633 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 106/277 (38%), Positives = 153/277 (55%), Gaps = 2/277 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S YF L+E+P +AE+ SHKL++R G I + + GIY+WLPLG + L N+ ++REE Sbjct: 4 RMSSYFARTLREDPVEAEVDSHKLLVRAGYIRRAAPGIYTWLPLGLRVLRNIENVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 +R G E+ P L + + + R++ +G + +L DR + GPTHEE+ T I + Sbjct: 64 DRIGGQELQFPVLLPREPYEATNRWEEFGSSLFKLQDRKGGDYLLGPTHEEMFTVIVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQI+ K+RDE RPR GV+R REF+MKD YSFDLT EG HSY +Y Sbjct: 124 FSSYKDLPILLYQIKEKYRDEARPRAGVIRGREFVMKDLYSFDLTDEGLAHSYALNRGAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 R++ RLGL+ +A+SG +GG S EF+ D GE S + T + Sbjct: 184 RRVYTRLGLEFAICQAQSGAMGGSASEEFLFPCDIGEDTFVRSPGGYAANAEAVTTAVPE 243 Query: 242 IISLN--SIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 + + E P + T + K + P R Sbjct: 244 ALPFDDAPAPEVLPTPDSTTIESLVAKANELYPRKDR 280 Score = 146 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 97/189 (51%), Gaps = 5/189 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + D P+ ARGIE+GHIF G KY+ + T +GK V MG Sbjct: 410 GTVEAAEVLPGDPAPDGSGPLTLARGIEIGHIFALGRKYAKALGLTVLDENGKAQVVTMG 469 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VAA+ E++HD KG++WP +VAPF++ ++ D A EK+ L Sbjct: 470 SYGIGVSRLVAAIAENTHDDKGLVWPVNVAPFQVHVLATG-KDPQVFAAAEKLARELEAA 528 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G V +DD G +F A+L+G P ++VG K +++ VEI+ R G D ++E Sbjct: 529 GIPVLYDDRAKASAGVKFKDAELMGMPYLLVVG-KGLANGTVEIRDRRAGNTLDCTVEAA 587 Query: 435 INYASHRFS 443 + Sbjct: 588 VEKLLGFIR 596 >gi|21220031|ref|NP_625810.1| threonyl-tRNA synthetase [Streptomyces coelicolor A3(2)] gi|289772757|ref|ZP_06532135.1| threonyl-tRNA synthetase [Streptomyces lividans TK24] gi|22654145|sp|Q9L278|SYT_STRCO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|6822227|emb|CAB70933.1| threonine-tRNA synthetase [Streptomyces coelicolor A3(2)] gi|289702956|gb|EFD70385.1| threonyl-tRNA synthetase [Streptomyces lividans TK24] Length = 658 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 68/439 (15%), Positives = 133/439 (30%), Gaps = 36/439 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + Q G+ + P G + R G + Sbjct: 254 EAEKRDHRKLGSELDLFS-IPEQIGSGLAVFHPKGGIIRRVMEDYSRRRHEEEGYEFVYT 312 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P L+ SG D Y M P + + IF + +SYR LP Sbjct: 313 PHATKGKLFETSGHLDWYADGMYPPMQLDEGVDYYLKPMNCPMHNLIFDARGRSYRELPL 372 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 ++ +R E G+ R+R F DA+ + + S+ +K L + G Sbjct: 373 RLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQMSEEL-DKTLTFVLNLLRDYG 431 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 L + + + S + + + + Sbjct: 432 LNDFYLELST----------------KDPEKFVGSDEAWEEATETLRQVAEKQNLELVAD 475 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y + + D++ ++S ++ F ++SL +A K Sbjct: 476 PGGAAFYGPKI---SVQARDAIGRTWQMSTIQLD----FNLPERFSLEYTAA---DGAKT 525 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + G++ AV+ + P +AP + I + E+ Sbjct: 526 RPVMIHRALFGSIERFFAVLL---EHYAGAMPPWLAPVQAVGIPVG---DAHVQYLEEFA 579 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 A + G V D +++ + P +IVG + + V ++R + Sbjct: 580 AEARRKGLRVDVDASSDRMQKKIRTQQKQKVPFMIIVGDEDMHGGTVSFRYRDGSQENGI 639 Query: 430 SLEEVINYASHRFSNNRPV 448 ++ + V Sbjct: 640 PRDQALAKLVDVVERRIQV 658 >gi|16078720|ref|NP_389539.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221309535|ref|ZP_03591382.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221313859|ref|ZP_03595664.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318782|ref|ZP_03600076.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. JH642] gi|221323054|ref|ZP_03604348.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY] gi|321315424|ref|YP_004207711.1| prolyl-tRNA synthetase [Bacillus subtilis BSn5] gi|11134893|sp|O31755|SYP_BACSU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|2634029|emb|CAB13530.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|291484212|dbj|BAI85287.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195] gi|320021698|gb|ADV96684.1| prolyl-tRNA synthetase [Bacillus subtilis BSn5] Length = 564 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 109/225 (48%), Positives = 151/225 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +P L+E P DAE SH+L+LR G I Q++ G+YS++PL K + N+ I+REE Sbjct: 1 MRQSLTLIPTLREVPADAEAKSHQLLLRAGFIRQNTSGVYSYMPLAYKVIQNIQQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P LQ A+ W ESGR+ +YG E++RL DR+ + G THEEV+T + R Sbjct: 61 MEKIDAVEMLMPALQQAETWQESGRWYTYGPELMRLKDRHGREFALGATHEEVITSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF + E +Y KM+ + Sbjct: 121 EVKSYKRLPLTLYQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHASAESLDETYQKMYEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y IF R G+ P+ A+SG +GG +HEF+ L+ GE + S Sbjct: 181 YSNIFARCGINVRPVIADSGAMGGKDTHEFMALSAIGEDTIAYSD 225 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 69/191 (36%), Positives = 110/191 (57%), Gaps = 3/191 (1%) Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A +D+ K D P+ K GIEVG +F GT+YS M+AT+ +G+ Sbjct: 375 DAQIKEFADLRFIKEGDPSPDGKGTIRFAEGIEVGQVFKLGTRYSEAMNATYLDENGRAQ 434 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + MG YGIG R ++A+ E HD KG+IWP SVAP+ + ++ + + R+ EK+YA Sbjct: 435 PMLMGCYGIGVSRTLSAIAEQHHDEKGLIWPKSVAPYDLHILALNMKNDGQRELAEKLYA 494 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L G +V +DD E+ G +FA +DL+G P+++ VG + + VE+K R TG ++S Sbjct: 495 DLKAEGYEVLYDDRAERAGVKFADSDLIGLPIRITVGKR-ADEGIVEVKIRQTGESTEIS 553 Query: 431 LEEVINYASHR 441 ++E+ + S + Sbjct: 554 VDELSAFISKQ 564 >gi|224002114|ref|XP_002290729.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220974151|gb|EED92481.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 791 Score = 216 bits (551), Expect = 5e-54, Method: Composition-based stats. Identities = 82/439 (18%), Positives = 153/439 (34%), Gaps = 37/439 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + + L M H+ S G WLP G + + + I+E R G E+ Sbjct: 387 EKAKERDHRRIAQQQDL--VMFHELSAGSAFWLPHGARIYNKLIEFIKEHYWRRGYDEII 444 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + + DLW +SG Y M D K P + +F I+SYR+LP Sbjct: 445 TPNIYNLDLWHQSGHAMHYKDAMF-CFDVEGKEWAMKPMNCPGHCLMFAGKIRSYRDLPI 503 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F + R+EL G+ R R F DA+ + + + ++ G Sbjct: 504 RFADFGVLHRNELSGALSGLTRVRRFQQDDAHIYCR-EDQIEDEVLGALDFMKSVYDTFG 562 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + + P + K+ D + D Sbjct: 563 MTY-KLELSTRP-----------------AKALGDKELWDRAEAALARAMDTFAGKGGWR 604 Query: 250 E--QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 E A Y D+ K+ D++ + + ++ FG +Y+ Sbjct: 605 ENPGDGAFYGPKIDI---KVMDAMERVHQCATVQLDFQLPIRFGLEYNTGSKEK---GSE 658 Query: 308 KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 V + +G++ + AV+ + G WP ++P ++ ++ I D + Sbjct: 659 FARPVMVHRAMLGSVERMFAVL---CEHYGGKWPLWLSPRQVMVVPIHKD---WNDYSQG 712 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + +L G D + A + + Q++VG V + V I+ R + Sbjct: 713 VRDKLHAEGFYADVDLSKATFQKKVRNAQVEQYNFQLVVGEAEVKNDTVNIRTRDNKVEG 772 Query: 428 DMSLEEVINYASHRFSNNR 446 + ++E+I Y + + Sbjct: 773 EKKVDELIEYLKQLRAEYK 791 >gi|307331523|ref|ZP_07610636.1| prolyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113] gi|306882840|gb|EFN13913.1| prolyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113] Length = 573 Score = 216 bits (551), Expect = 5e-54, Method: Composition-based stats. Identities = 109/263 (41%), Positives = 150/263 (57%), Gaps = 4/263 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S L L+E+P DAE ASHKL++R G + + + GI++WLP+G+K L+NV I+REE Sbjct: 9 RLSTTMLKTLREDPADAETASHKLLVRAGYVRRAAAGIWTWLPIGKKVLENVARIVREEM 68 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + SGR+D YG + R+ DR + GPTHEE+ T + Sbjct: 69 DAIGAQEVLLPALLPREPYEVSGRWDEYGDLLFRIKDRKGADYLLGPTHEEIFTLTVKDQ 128 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR GV+R REFLMKD+YSFD T EG SY +Y Sbjct: 129 CTSYKDLPVMLYQIQTKYRDEARPRSGVLRGREFLMKDSYSFDTTDEGLAESYRLHREAY 188 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF-- 239 RIF RLGL + A SG +GG S EF+ A GE + D+ +E Sbjct: 189 QRIFQRLGLDYRIVSAVSGAMGGSASEEFLAPAAAGEDTFVDCPNC-DYAANTEAVTVAV 247 Query: 240 -DDIISLNSIVEQWTAPYAATSD 261 + + +E+ P T + Sbjct: 248 SPVEGAEHGPLEELDTPDTPTIE 270 Score = 143 bits (361), Expect = 5e-32, Method: Composition-based stats. Identities = 62/174 (35%), Positives = 87/174 (50%), Gaps = 6/174 (3%) Query: 269 DSLPENKRVS--ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P R IE+GHIF G KY+ G +GK V MGSYG+G R VA Sbjct: 398 DPCPRCGTGIELDRAIEIGHIFQLGRKYADAFQLDVLGQNGKPARVTMGSYGVGVSRAVA 457 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-G 385 A+ E +HD G+ WP VAP + + A + + I +L G V DD G Sbjct: 458 ALAEQTHDESGLCWPREVAPADVH--IVAAGKALQTELALDIAEKLGTAGVRVMVDDRAG 515 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 G +F A+L+G P ++VG + D VE+K R TG RE++ ++E I+ + Sbjct: 516 VSPGVKFTDAELIGVPTILVVG-RGAKDGVVELKDRRTGEREELPIDEAISRLT 568 >gi|218563696|ref|NP_001116258.1| threonyl-tRNA synthetase, cytoplasmic isoform 1 [Danio rerio] gi|158253608|gb|AAI54372.1| Zgc:92586 protein [Danio rerio] Length = 718 Score = 216 bits (551), Expect = 5e-54, Method: Composition-based stats. Identities = 77/447 (17%), Positives = 152/447 (34%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD + L H S G +LP G + + IR E Sbjct: 301 KMLKEWEKFQEEAKNRDHRKLGREQDLF--FFHDLSPGSCFFLPKGAYIYNTLIEFIRSE 358 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW SG + Y + M + P + +F Sbjct: 359 YRKRGFQEVVTPNIYNSKLWQTSGHWQHYSENMFSFEVEKEI-FALKPMNCPGHCLMFDH 417 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 418 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCSMDQIESE-IKGCLD 476 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G F + T + + D Sbjct: 477 FLRTVYDVFGFT------------------FKLNLSTRPEKFLGEPEVWDQAEKQLENSL 518 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 +D + A Y D+ ++ D++ + + ++ F +++L Sbjct: 519 NDFGEKWVLNPGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRFNLTFV 571 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K V + +G++ + A++ + G WP ++P ++ ++ I Sbjct: 572 SH--DGDDKKRPVIIHRAILGSVERMIAILT---ENYGGKWPLWLSPRQVMVVPIGP--- 623 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C + +++ KVG D D G + + A L + ++VG K S V + Sbjct: 624 TCDEYAQRVQKEFHKVGLMTDVDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKSSDTVNV 683 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R + + SL + + ++ Sbjct: 684 RTRDNKVHGERSLTDCMERLKQLKASR 710 >gi|331232891|ref|XP_003329107.1| threonyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309308097|gb|EFP84688.1| threonyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 765 Score = 216 bits (551), Expect = 5e-54, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 142/445 (31%), Gaps = 38/445 (8%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD L H+ S G WLP G + + + + E + G E+ Sbjct: 345 LEEAAKRDHRKIGKDQDLF--FFHELSPGSCFWLPHGTRIYNTLVEFFKSEYRKRGYDEV 402 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P + +A LW SG +++Y M +L D + P + IF S +SYR LP Sbjct: 403 ISPNMYNAKLWQTSGHWENYADSMFKL-DIEKETFGLKPMNCPGHCLIFGSRDRSYRELP 461 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 + R+E G+ R R F DA+ F T + +F ++ L Sbjct: 462 IRMADFGVLHRNEASGALSGLTRVRRFCQDDAHHFCTTEQIDSEM-AGIFDLLKTVYGML 520 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 G ++ + P E LA+ Q +F P E + Sbjct: 521 GFTY-KLKLSTRPDNYIGDLEVWNLAEKRLGQAL-----DEFVGPGE----------WDV 564 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTKYSLPMSATFKGAD 306 A Y D+ + D+L + + ++ F + GA+ Sbjct: 565 DPGDGAFYGPKIDI---TISDALKRRHQCATIQLDFQLPERFKLQYRTDQGGQGAEAGAE 621 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHD-GKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 + V + +G++ A++ + Sbjct: 622 ERKRPVMIHRAIMGSVERFTAILTEHFAGKWPFWLSPRQVMVIPVAAP-------HKAYA 674 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT-- 423 +++ +L G D + + ++ + ++VGS+ + V ++ Sbjct: 675 QEVAQKLWDAGLYADADMSDATLPKKIRNGEVASYNFILVVGSEELESRSVNVRSADDVG 734 Query: 424 --GIREDMSLEEVINYASHRFSNNR 446 G E + E + + R Sbjct: 735 QKGKAEALPFEAALEKLLSLKNERR 759 >gi|295101322|emb|CBK98867.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Faecalibacterium prausnitzii L2-6] Length = 594 Score = 216 bits (551), Expect = 5e-54, Method: Composition-based stats. Identities = 74/438 (16%), Positives = 148/438 (33%), Gaps = 38/438 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD ++ L M +G+ +LP G + I+E++ G + + Sbjct: 189 EARERDHRKIGKEMGLF--MTDDLVGRGLPMFLPAGYTVWQELENYIKEKERARGYLHVM 246 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + + +L+ SG +D Y + M + ++ + P + I+ + SYR+LP Sbjct: 247 TPCIGTVNLYKTSGHWDHYRENMFPAMEMEGESYVLRPMNCPHHMMIYANRPHSYRDLPM 306 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 +I FR E G+ R R F DA+ F + + + + Sbjct: 307 RIGEIAHDFRYESSGTLKGIERGRHFCQNDAHLFCTPEQIKSEVADVCNLIFETYKDFNI 366 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + P H+ + + ++ + Sbjct: 367 TDYRCVLSLRDPADKKKYHD--------------DDAMWNHAENALREVLTELGIHFTEE 412 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y DV + ++ +S ++ F K+ T+ DG + Sbjct: 413 IGEAAFYGPKLDV---NVKPAVGAEYTLSTCQLD----FCLPAKF----HLTYVDKDGTE 461 Query: 310 HYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + +G++ A + GK W V + + + + E I Sbjct: 462 KTPVVLHRAILGSLDRFMAYLIEETKGKFPTWLAPVQVKVLPV------SEKTLEYSEAI 515 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLL-GFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +L + G V DD ++IG + A + P +++G+K V ++ R G Sbjct: 516 TEKLVEAGVRVALDDDNQKIGYKIRAAQQVDRVPYMLVLGAKEAEAGNVSVRDRK-GETT 574 Query: 428 DMSLEEVINYASHRFSNN 445 M ++E I + N Sbjct: 575 TMEVDEFIAKVTSEIKNR 592 >gi|122891384|emb|CAM13348.1| novel prtoein similar to vertebrate threonyl-tRNA synthetase (TARS, zgc:92586) [Danio rerio] Length = 718 Score = 216 bits (551), Expect = 5e-54, Method: Composition-based stats. Identities = 77/447 (17%), Positives = 152/447 (34%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD + L H S G +LP G + + IR E Sbjct: 301 KMLKEWEKFQEEAKNRDHRKLGREQDLF--FFHDLSPGSCFFLPKGAYIYNTLIEFIRSE 358 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW SG + Y + M + P + +F Sbjct: 359 YRKRGFQEVVTPNIYNSKLWQTSGHWQHYSENMFSFEVEKEI-FALKPMNCPGHCLMFDH 417 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 418 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCSMDQIESE-IKGCLD 476 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G F + T + + D Sbjct: 477 FLRTVYDVFGFT------------------FKLNLSTRPEKFLGEPEVWDQAEKQLENSL 518 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 +D + A Y D+ ++ D++ + + ++ F +++L Sbjct: 519 NDFGEKWVLNPGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRFNLTFV 571 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K V + +G++ + A++ + G WP ++P ++ ++ I Sbjct: 572 SH--DGDDKKRPVIIHRAILGSVERMIAILT---ENYGGKWPLWLSPRQVMVVPIGP--- 623 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C + +++ KVG D D G + + A L + ++VG K S V + Sbjct: 624 TCDEYAQRVQKEFHKVGLMTDVDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKSSDTVNV 683 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R + + SL + + ++ Sbjct: 684 RTRDNKVHGERSLTDCMERLKQLKASR 710 >gi|290957026|ref|YP_003488208.1| prolyl tRNA synthetase [Streptomyces scabiei 87.22] gi|260646552|emb|CBG69649.1| prolyl tRNA synthetase [Streptomyces scabiei 87.22] Length = 567 Score = 216 bits (551), Expect = 5e-54, Method: Composition-based stats. Identities = 107/263 (40%), Positives = 149/263 (56%), Gaps = 4/263 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ L+++P DAE+ SHKL++R G + + + G+++WLPLG+K L NV I+REE Sbjct: 8 RMSQLMAKTLRDDPADAEVLSHKLLVRAGYVRRTAAGVWTWLPLGKKVLANVERIVREEM 67 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + +GR+D YG E+ RL DR + GPTHEE+ T I + Sbjct: 68 DAIGAQEVLLPALLPKEPYEATGRWDEYGPELFRLKDRKGGDYLLGPTHEEIFTLIVKDQ 127 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ KFRDE RPR G++R REFLMKD+YSFD EG SY +Y Sbjct: 128 ASSYKDLPVILYQIQTKFRDEARPRAGILRGREFLMKDSYSFDTEDEGLAQSYALHRAAY 187 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++F RLGL A +G +GG S EF+ A GE F DF +E F+ Sbjct: 188 QKVFERLGLDYRICAATAGAMGGSKSEEFLAPAGAGE-DTFADCPACDFAANTEAITFEL 246 Query: 242 I---ISLNSIVEQWTAPYAATSD 261 +E+ P T + Sbjct: 247 KPVDAGDTPALEEIPTPDTPTIE 269 Score = 137 bits (346), Expect = 3e-30, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 92/197 (46%), Gaps = 6/197 (3%) Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFK 303 ++V A DV + D P R IE+GHIF G KY+ + Sbjct: 373 KNVVAGRDFEVGAYVDVVVVQEGDPCPNCGTGLKLDRAIEIGHIFQLGRKYADALKLDVL 432 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 G GK V MGSYGIG R VAA+ E S D KG+ WP VAP + + A + + Sbjct: 433 GQHGKPVRVTMGSYGIGVSRAVAALAEQSADDKGLCWPAEVAPADVH--VVAAGKALQTE 490 Query: 364 ACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +L G V DD G G +F ++L+G P ++ G + +E+K R Sbjct: 491 LALDVSEKLRAAGLRVLVDDRAGVSPGVKFTDSELIGVPKILVAGRRSAE-GVLELKDRR 549 Query: 423 TGIREDMSLEEVINYAS 439 TG RE+++++E I + Sbjct: 550 TGEREELTVDEAIARLT 566 >gi|256788869|ref|ZP_05527300.1| threonyl-tRNA synthetase [Streptomyces lividans TK24] Length = 653 Score = 216 bits (551), Expect = 5e-54, Method: Composition-based stats. Identities = 68/439 (15%), Positives = 133/439 (30%), Gaps = 36/439 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + Q G+ + P G + R G + Sbjct: 249 EAEKRDHRKLGSELDLFS-IPEQIGSGLAVFHPKGGIIRRVMEDYSRRRHEEEGYEFVYT 307 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P L+ SG D Y M P + + IF + +SYR LP Sbjct: 308 PHATKGKLFETSGHLDWYADGMYPPMQLDEGVDYYLKPMNCPMHNLIFDARGRSYRELPL 367 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 ++ +R E G+ R+R F DA+ + + S+ +K L + G Sbjct: 368 RLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQMSEEL-DKTLTFVLNLLRDYG 426 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 L + + + S + + + + Sbjct: 427 LNDFYLELST----------------KDPEKFVGSDEAWEEATETLRQVAEKQNLELVAD 470 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y + + D++ ++S ++ F ++SL +A K Sbjct: 471 PGGAAFYGPKI---SVQARDAIGRTWQMSTIQLD----FNLPERFSLEYTAA---DGAKT 520 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + G++ AV+ + P +AP + I + E+ Sbjct: 521 RPVMIHRALFGSIERFFAVLL---EHYAGAMPPWLAPVQAVGIPVG---DAHVQYLEEFA 574 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 A + G V D +++ + P +IVG + + V ++R + Sbjct: 575 AEARRKGLRVDVDASSDRMQKKIRTQQKQKVPFMIIVGDEDMHGGTVSFRYRDGSQENGI 634 Query: 430 SLEEVINYASHRFSNNRPV 448 ++ + V Sbjct: 635 PRDQALAKLVDVVERRIQV 653 >gi|75908999|ref|YP_323295.1| threonyl-tRNA synthetase [Anabaena variabilis ATCC 29413] gi|75702724|gb|ABA22400.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Anabaena variabilis ATCC 29413] Length = 615 Score = 216 bits (551), Expect = 5e-54, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 152/442 (34%), Gaps = 39/442 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD +L L Q G+ W P G + +++EQ + G + + Sbjct: 203 EEALRRDHRKLGKELGLFI-FSEQVGPGLPLWTPKGTLLRSTLEQFLQQEQLKRGYLPVV 261 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKA------MIYGPTHEEVMTDIFRSHIKS 124 P + DL+ SG + Y ++M L ++ A + P + I++S ++S Sbjct: 262 TPHIARVDLFKTSGHWQKYKEDMFPLMAEDEAAAAIEQGFVLKPMNCPFHIQIYKSELRS 321 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR LP + +R E G + D +TPE + + L + Sbjct: 322 YRELPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDSEFLNVVDLILSV 381 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F L LK+ R D + S + + + + + Sbjct: 382 FKSLQLKNFKARLS--------------FRDPASDKYIGSDEVWNKAEGAIRRAVEQLGM 427 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y D D+L ++ ++ + Sbjct: 428 EHFEGIGEAAFYGPKLDFI---FSDALEREWQLGTVQVDYNLP--------ERFDLEYVA 476 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + G++ + ++ + +P +AP + L+ + + D Sbjct: 477 EDGTRKRPVMIHRAPFGSLERLIGILI---EEYAGDFPLWLAPVQARLLPVG---EAQLD 530 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + A+L +G D G+++G A+ P+ +VG+K V + + I+ R + Sbjct: 531 FTKDVVAKLRSLGIRAEVDTSGDRLGKLIRNAEKDKIPVMGVVGAKEVETNSLSIRTRAS 590 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G + ++EV+ +N Sbjct: 591 GELGAIPVDEVVQKMKDAIANY 612 >gi|118472270|ref|YP_886958.1| prolyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155] gi|302595855|sp|A0QVM0|SYP_MYCS2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|118173557|gb|ABK74453.1| prolyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155] Length = 585 Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats. Identities = 96/241 (39%), Positives = 143/241 (59%), Gaps = 1/241 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ SHKL++R G + GIYSWLPLG + L + ++R E Sbjct: 4 RMSELFLRTLRDDPADAEVPSHKLLIRAGYVRAVGPGIYSWLPLGLRVLRKIENVVRSEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+ +P L + + R+ YG + RL DR + + GPTHEE+ T + Sbjct: 64 NAIGAQEILLPALLPRGPYETTNRWTEYGDTLFRLQDRRNNDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ K+RDE RPR G++R REF+MKD+YSFD+ +G K++Y + +Y Sbjct: 124 YSSYKDFPVILYQIQTKYRDEARPRAGILRGREFVMKDSYSFDVDDDGLKNAYYQHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGET-QVFCSKDFMDFPIPSENTDFD 240 RIF RLG++ + + A SG +GG S EF+ ++ GE V C + + + T Sbjct: 184 QRIFARLGVRYVIVSAVSGAMGGSASEEFLAESEVGEDTFVRCVESGYAANVEAVITRAP 243 Query: 241 D 241 + Sbjct: 244 E 244 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 67/188 (35%), Positives = 98/188 (52%), Gaps = 4/188 (2%) Query: 258 ATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ V RGIE+GHIF G KY+ SA G DGK + MG Sbjct: 399 GTIEAAEVRDGDPSPDGAGVLTSARGIEIGHIFQLGRKYTDAFSADVLGEDGKPLRLTMG 458 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VA + E HD G+ WP SVAPF + ++ D R ++ A L ++ Sbjct: 459 SYGIGVSRLVAVIAEQQHDQLGLRWPSSVAPFDVHVVVAN-KDAGARAGAAELVADLDRL 517 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V +DD G +F A+LLG P V+VG + +D VE+++R TG +++ + Sbjct: 518 GHEVLFDDRQASPGVKFKDAELLGMPWIVVVG-RGWADGVVELRNRFTGETREIAADGAA 576 Query: 436 NYASHRFS 443 S + Sbjct: 577 AEISSVLA 584 >gi|308177541|ref|YP_003916947.1| threonine--tRNA ligase [Arthrobacter arilaitensis Re117] gi|307745004|emb|CBT75976.1| threonine--tRNA ligase [Arthrobacter arilaitensis Re117] Length = 671 Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats. Identities = 63/456 (13%), Positives = 135/456 (29%), Gaps = 48/456 (10%) Query: 5 KYFLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L + RD +L L + + G+ + P G + +R+ Sbjct: 245 KAYQERLAEAERRDHRKLGAELDLFS-FPDELGSGLPVFHPKGGIIKREMEDYVRDRHVE 303 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLR------------LADRNDKAMIYGPTHE 111 G + P + L+ SG Y M + + + Sbjct: 304 EGFQYVGTPHISKDGLFHTSGHLPYYADTMFPALHIDEERDEDGNITKQGQEYRLKAMNC 363 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IFR +SYR LP ++ +R E G+ R R F D++S+ + Sbjct: 364 PMHNLIFRGRGRSYRELPLRLFEFGHVYRYEKSGVVHGLTRVRGFSQDDSHSYVTKEQAP 423 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L + G+ + + D S + + Sbjct: 424 AE-VEHLLNFMLSLLRDFGMDDFYLELSTRDPESDKF--------------IGSDEQWNE 468 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + A Y + + D++ ++ + F Sbjct: 469 ATAVLERVATESGVELVADPGGAAFYGPKI---SVQAKDAIGRTWQMGTVQYDFNQPARF 525 Query: 291 GTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 G ++ ADG + + G++ V+ + +P ++P ++ Sbjct: 526 G--------LEYQAADGTRQEPVMIHAAKFGSIERFLGVLT---EHYAGAFPAWLSPVQV 574 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 I + + D ++ A+L G V DD ++ + A P +I G + Sbjct: 575 RAIPVA---EAFNDYLGEVVAKLKAAGVRVELDDSSDRFPKKIRNASKDKIPFVLIAGGE 631 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 + V + R + +++ + + Sbjct: 632 DADANAVSFRFRDGSQENQVPVDDAVARIVEAIKSR 667 >gi|322379034|ref|ZP_08053437.1| threonyl-tRNA synthetase [Helicobacter suis HS1] gi|322380800|ref|ZP_08054906.1| threonyl-tRNA synthetase [Helicobacter suis HS5] gi|321146804|gb|EFX41598.1| threonyl-tRNA synthetase [Helicobacter suis HS5] gi|321148526|gb|EFX43023.1| threonyl-tRNA synthetase [Helicobacter suis HS1] Length = 601 Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats. Identities = 74/444 (16%), Positives = 147/444 (33%), Gaps = 40/444 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y + + RD +L L G+ WLP G + + ++ + Sbjct: 193 LKEYLYQLEEAKKRDHRKLGQELGLF-CFDENLGAGLPIWLPNGMRLRVRLENLLSKALL 251 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G + P + + LW +SG Y +Y + M ++ P + ++ + Sbjct: 252 QYGYEPVRGPEILKSSLWQKSGHYQNYKENM-YFTTIDEVEYGIKPMNCVGHIKVYEHAL 310 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR LP FY+ + R E G++R REF DA+ F +S Sbjct: 311 RSYRELPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCR-----FDQIKTEVLSI 365 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L + + G E+ + T + + + ++ Sbjct: 366 LEF--------------TKKVMGVFGFEYEMELSTKPAKYIGEDHIWEQATNALKQALEE 411 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I A Y D+ K+ D++ + +++ F + Sbjct: 412 HNISFGIDAGGGAFYGPKIDI---KITDAIRRKWQCGTVQVDMNLPARF--------ELS 460 Query: 302 FKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G + V + +G+ A++ + G + I + Sbjct: 461 YTNETGNLEQPVMIHRAILGSFERFIAILTEHYSGNYPFF------IAPVQIALVPVSMD 514 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + ++IY +L+K G V D E + + + P V+VG + V+ + I+ Sbjct: 515 QLEYAQEIYHKLNKRGFFVCMADKNETLSKRIRSLEKQKIPFIVVVGKEEVAQGSLAIRD 574 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R G + M EE + Sbjct: 575 RALGKQYTMLQEEFFQSMEAKMRE 598 >gi|147899539|ref|NP_001087812.1| threonyl-tRNA synthetase [Xenopus laevis] gi|51895835|gb|AAH81263.1| MGC86352 protein [Xenopus laevis] Length = 721 Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats. Identities = 74/449 (16%), Positives = 155/449 (34%), Gaps = 44/449 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD + L H+ S G +LP G + + IR+E Sbjct: 304 KMLKEWEKFQEEAKNRDHRKLGKEQELF--FFHELSPGSCFFLPKGAYIYNQLIGFIRQE 361 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW SG + Y + M + P + +F Sbjct: 362 YRKRGFQEVVTPNVYNSKLWQTSGHWQHYSENMFSFEVEKEI-FALKPMNCPGHCLMFDH 420 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + + Sbjct: 421 RPRSWRELPMRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQ-IEEEIKSCLD 479 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 +++ G + P E A+ Sbjct: 480 FLRSVYNVFGFTFKLN-LSTRPEKFLGDIEVWNQAEK-----------------QLENSL 521 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 522 NEFGEKWVLNPGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 570 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 571 LTYVSHDGDDKKRPVIIHRAILGSVERMIAILT---ENFGGKWPLWLSPQQVMVVPVGP- 626 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +++ + + G D D G + + A L + ++VG K + V Sbjct: 627 --TCDEYAQQVREQFHRAGLMTDVDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASETV 684 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 I+ R + + ++ E I + Sbjct: 685 NIRTRDNKVHGERTVTETIQRLLQLKESR 713 >gi|320167861|gb|EFW44760.1| threonyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864] Length = 726 Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats. Identities = 68/439 (15%), Positives = 140/439 (31%), Gaps = 44/439 (10%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 L+ RD + L H+ S G +LP G + + + IR E G E+ Sbjct: 309 LEAAKRDHRKLGTEQSLF--FFHELSPGSCFFLPHGTRIYNTLMEFIRSEYWARGFTEVI 366 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + ++ LW +SG + Y + M D + P + +F +S++ LP Sbjct: 367 TPNMYNSKLWQQSGHWQHYAENMFSF-DIEKEKFALKPMNCPGHCLMFDQAFRSHKELPI 425 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F + R+E G+ R R F DA+ F + + + L + Sbjct: 426 RFADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCKPSDIANE-----IDNALAFLKAVY 480 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 F + T D + + + Sbjct: 481 TVFGFT--------------FQLKLSTRPEGFLGDIALWDKAEKQLEESLNKFGAPWKLN 526 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + + + ++ F ++ ++ DG + Sbjct: 527 PGDGAFYGPKIDI---TIMDALRRSHQCATIQLD----FQLPIRF----GLKYQAPDGTE 575 Query: 310 HYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + I R++A + E+ A + C D + Sbjct: 576 QTPVIIHRAILGSVERMIAILTENFAGKWPFWLSPRQALVIAV-------SKDCNDYAHE 628 Query: 368 IYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + +L G V +D E + + A L + ++VG++ ++ R + Sbjct: 629 VQKQLHDAGFHVDYDLWPDETLNKKVRNAQLAQYNFILVVGARERESRSANVRTRDNKVH 688 Query: 427 EDMSLEEVINYASHRFSNN 445 + ++ ++I + + Sbjct: 689 GERTIPQLIAEFTELAKSR 707 >gi|313112983|ref|ZP_07798626.1| threonyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255] gi|310624703|gb|EFQ08015.1| threonyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255] Length = 594 Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats. Identities = 72/439 (16%), Positives = 153/439 (34%), Gaps = 40/439 (9%) Query: 12 QENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD ++ L M +G+ +LP G + I+E++ G + + Sbjct: 189 EARERDHRKIGKEMGLF--MTDDLVGRGLPMFLPAGYTVWQELENYIKEKERARGYLHVM 246 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + + +L+ SG +D Y + M + ++ + P + I+ + SYR+LP Sbjct: 247 TPCIGTVNLYKTSGHWDHYRENMFPAMEMEGESYVLRPMNCPHHMMIYANRPHSYRDLPM 306 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 +I FR E G+ R R F DA+ F + + ++ Sbjct: 307 RIGEIAHDFRYESSGTLKGIERGRHFCQNDAHLFCTPEQIKSE-VANVCDLIFEVYKDFN 365 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDIISLNSI 248 + D + + + D + + ++ + Sbjct: 366 ITDYRCVLSLR--------------DPADKKKYHDDDAMWNHAEQALREVLTELGIHFTE 411 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A Y DV + ++ +S ++ F K+ T+ DG Sbjct: 412 EIGEAAFYGPKLDV---NVKPAVGAEYTLSTCQLD----FCLPAKF----HLTYVDKDGT 460 Query: 309 DHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + + +G++ A + + +P +AP ++ ++ + + D E Sbjct: 461 EKTPVVLHRAILGSLDRFMAYLI---EETKGKFPTWLAPTQVKVLPV---SEKTLDYAEG 514 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLL-GFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + +L + G V DD ++IG + A + P +++G+K + ++ R G Sbjct: 515 VTEKLVEAGVRVVLDDDNQKIGYKIREAQQVDRVPYMLVLGAKEAEAGNISVRDRK-GET 573 Query: 427 EDMSLEEVINYASHRFSNN 445 M L+ I + N Sbjct: 574 TTMELDAFIAKVTAEIRNR 592 >gi|73951029|ref|XP_857141.1| PREDICTED: similar to threonyl-tRNA synthetase-like 2 isoform 2 [Canis familiaris] Length = 799 Score = 216 bits (550), Expect = 6e-54, Method: Composition-based stats. Identities = 75/447 (16%), Positives = 153/447 (34%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD + L H S G +LP G + + IREE Sbjct: 382 KMMKTWEKFQEEAKNRDHRKVGKEQELF--FFHDLSPGSCFFLPRGAFIYNTLMDFIREE 439 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R E+ P + ++ LW SG + Y + M D P + +F Sbjct: 440 YHRRNFTEVLSPNMFNSKLWETSGHWQHYSENMFTF-DIEKDTFALKPMNCPGHCLMFAH 498 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R +P + R+EL G+ R R F DA+ F + + Sbjct: 499 RPRSWREMPVRLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQ-IEEEIKGCLQ 557 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G F + T + D Sbjct: 558 FLQSVYSTFGFS------------------FQLNLSTRPENFLGEVELWDEAEKQLQNSL 599 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + A Y D+ K+ D++ + + ++ F +++L Sbjct: 600 VEFGKPWKMNPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRFNLTYV 652 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K + V + +G++ + A++ + G WP ++P ++ +I + Sbjct: 653 SK--DGDDKRNPVIIHRAILGSVERMIAILS---ENYGGKWPFWLSPRQVMVIPVGP--- 704 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C ++ + + G D D + + A L + ++VG K +++ V + Sbjct: 705 TCEKYALQVSSAFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKTNNAVNV 764 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R I ++S+ I+ + + Sbjct: 765 RTRDNKIHGEISVTSAIHKLKNLKKSR 791 >gi|282916523|ref|ZP_06324281.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139] gi|283770327|ref|ZP_06343219.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19] gi|282319010|gb|EFB49362.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139] gi|283460474|gb|EFC07564.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19] Length = 567 Score = 216 bits (550), Expect = 6e-54, Method: Composition-based stats. Identities = 111/237 (46%), Positives = 163/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK D+ E Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSK-ESDYAANIEKA 236 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 75/231 (32%), Positives = 118/231 (51%), Gaps = 3/231 (1%) Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIV-EQWTAPYAATSDVHNEKLFDSLPENK 275 E +++ D + D +N V + E S Sbjct: 339 KEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGV 398 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD Sbjct: 399 AHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNHDD 458 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 GI+WP SV PF + LI+I R+ + +YA + DV +DD E+ G +F A Sbjct: 459 NGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEFNTK-FDVLYDDRQERAGVKFNDA 517 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 DL+G PL+++VG + S+ VE+K RLTG E++ +++++ ++++ N + Sbjct: 518 DLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDNLK 567 >gi|239944683|ref|ZP_04696620.1| prolyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998] gi|239991146|ref|ZP_04711810.1| prolyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379] gi|291448145|ref|ZP_06587535.1| prolyl-tRNA synthetase 1 [Streptomyces roseosporus NRRL 15998] gi|291351092|gb|EFE77996.1| prolyl-tRNA synthetase 1 [Streptomyces roseosporus NRRL 15998] Length = 567 Score = 216 bits (550), Expect = 6e-54, Method: Composition-based stats. Identities = 111/269 (41%), Positives = 156/269 (57%), Gaps = 4/269 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE SHKL++R G + +++ GI++WLPLG+K LDN++ ++REE Sbjct: 6 RMSRLMIKTLRDDPADAETLSHKLLVRAGYVRRNAAGIWTWLPLGKKVLDNISNVVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + SGR++ YG + RL DR + GPTHEE+ T + Sbjct: 66 DAIGAQEVLLPALLPKEPYEASGRWEEYGDLLFRLKDRKGGDYLLGPTHEEIFTQTVKDQ 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR GV+R REF MKD+YSFD T EG HSY +Y Sbjct: 126 CTSYKDLPVMLYQIQTKYRDEARPRSGVLRGREFQMKDSYSFDTTDEGLAHSYALHRAAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF-- 239 ++IF RLGL + A SG +GG S EF+ A GE F D+ +E F Sbjct: 186 IKIFERLGLDHRIVSAVSGAMGGSASEEFLAPAAAGE-DTFADCPNCDYAANTEAVTFAL 244 Query: 240 -DDIISLNSIVEQWTAPYAATSDVHNEKL 267 S + VE+ P T + E L Sbjct: 245 APVDGSAHGAVEELDTPDTPTIETLAEHL 273 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 61/186 (32%), Positives = 93/186 (50%), Gaps = 6/186 (3%) Query: 261 DVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 DV + D P+ V R IE+GHIF G KY+ G GK V MGSYG Sbjct: 385 DVVVVEEGDPCPKCGTGLVLDRAIEIGHIFQLGRKYADTFQLDVLGQQGKPVRVTMGSYG 444 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R VAA+ E + D KG+ WP +AP + + A + + + +L+ G Sbjct: 445 IGVSRAVAALTEQTADDKGLCWPREIAPADVH--VVAAGKALQTELALDVSEKLNAAGLR 502 Query: 379 VFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 V DD G G +F ++L+G P ++ G + +D +E+K R TG RE+++++E I Sbjct: 503 VLVDDRAGVSPGVKFTDSELIGVPKILVAGRRS-ADGVLELKDRRTGEREELTVDEAIAR 561 Query: 438 ASHRFS 443 + + Sbjct: 562 LTADLA 567 >gi|282927605|ref|ZP_06335221.1| prolyl-tRNA synthetase [Staphylococcus aureus A10102] gi|282590608|gb|EFB95685.1| prolyl-tRNA synthetase [Staphylococcus aureus A10102] Length = 567 Score = 216 bits (550), Expect = 6e-54, Method: Composition-based stats. Identities = 119/294 (40%), Positives = 176/294 (59%), Gaps = 5/294 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK D+ E + Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSK-ESDYAANIEKAEVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY 294 + T + N K L + I IF +Y Sbjct: 240 YEPNHKHS----TVQPLEKIETPNVKTAQELADFLGRPVDEIVKTMIFKVDDEY 289 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 70/188 (37%), Positives = 110/188 (58%), Gaps = 4/188 (2%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D + L + V+ GIEVG +F GTKYS M+ATF GK + MG YG Sbjct: 382 DFRFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYG 441 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R ++A++E +HD GI+WP SV PF + LI+I R+ + +YA + D Sbjct: 442 IGISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEFNTK-FD 500 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V +DD E+ G +F ADL+G PL+++VG + S+ VE+K RLTG E++ +++++ Sbjct: 501 VLYDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVI 559 Query: 439 SHRFSNNR 446 ++++ N + Sbjct: 560 TNKYDNLK 567 >gi|220905829|ref|YP_002481140.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7425] gi|219862440|gb|ACL42779.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7425] Length = 610 Score = 216 bits (550), Expect = 6e-54, Method: Composition-based stats. Identities = 69/448 (15%), Positives = 140/448 (31%), Gaps = 42/448 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + +E R D +L L G+ W P G + +++EQ + G Sbjct: 193 YQRRKEEAQRRDHRKLGKELGLFI-FSDLVGPGLPLWTPKGTILRSTLEDFLKQEQLKRG 251 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA------MIYGPTHEEVMTDIFR 119 + P + DL+ SG + Y ++M L +++ + P + I++ Sbjct: 252 YQPVVSPHIARVDLFKTSGHWQKYKEDMFPLMSEDEQERQSEVGFVMKPMNCPFHIQIYK 311 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 S ++SYR+LP + +R E G + D +TP + K+ Sbjct: 312 SELRSYRDLPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPSQLDDEFLKVVD 371 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L +F +L LK+ R D + S + + Sbjct: 372 LILSVFAQLQLKNFKARLS--------------FRDPNSDKYIGSDQAWEKAQTAIRQAV 417 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + + A Y D D+L ++ ++ Sbjct: 418 ETLGMDHFEGIGEAAFYGPKLDFI---FQDALEREWQLGTVQVDYNLP--------ERFE 466 Query: 300 ATFKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + DG M R++ +IE + Sbjct: 467 LEYVAEDGSRQRPVMIHRAPFGSLERLIGILIEEYAGDFPLWLAPEQVRLLTVG------ 520 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 ++ ++ +G V D G+++ + A+ P+ ++G+K V + Sbjct: 521 -DDQMPFARQVAEQMQALGVRVVIDTSGDRLPKKIRNAEKEKIPVMAVIGAKEVEADSLS 579 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 I+ R G +S+ EV+ + + Sbjct: 580 IRTRAAGELGVISVPEVVERLAKAIHDR 607 >gi|110004597|emb|CAK98934.1| probable threonyl-trna synthetase 1 protein [Spiroplasma citri] Length = 638 Score = 216 bits (550), Expect = 6e-54, Method: Composition-based stats. Identities = 60/443 (13%), Positives = 135/443 (30%), Gaps = 33/443 (7%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 + + RD L + T G+ WLP G + IRE++ Sbjct: 226 QVLFAYEERRERDHRKIGKDLEIFT-FDKLVGPGLPIWLPNGMALKKVLQEYIREKEWEY 284 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + +++++ SG +D Y + M +N++ + P ++ +S Sbjct: 285 DFTEVDTPVIGTSEMYKISGHWDHYQENMFAPMAQNNEISVLRPMACPHHIAVYNYKQRS 344 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR LP + + R E + + L + K + + F + Sbjct: 345 YRELPLRIAEHAILHRYETSGSLTGLERVRMMQLTDSHIFLRHDQLKEEFKRCFKLINEV 404 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK-DFMDFPIPSENTDFDDII 243 L + D + + + DD+ Sbjct: 405 LTDLKITVDYYSLSLR--------------DPANKEKYYDDNQMWNHAEQMLQEALDDLK 450 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y D+ ++ +L VS + F + ++ Sbjct: 451 IPYVPMIGEAAFYGPKLDI---QIKTALNHEITVSTLQFD----FLLP----KKFNLSYI 499 Query: 304 GADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G V + IG A++ G W ++ I +++ Sbjct: 500 DETGAKAMPVMLHRGLIGTYERFIAILLEQTKGVLPFWLA-----PKQIVIIPVNNEHHL 554 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + +++ + K+ DD E++ + A + P Q+++G + + + Sbjct: 555 EYVNELHQQFKKLKLRTTIDDRDERLSYKIREAQVAKIPYQIVIGDQERDKKMITYRIYG 614 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + + ++ I + + N Sbjct: 615 QEDQITTTFDKFIILINEQIINK 637 >gi|49486102|ref|YP_043323.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476] gi|81175024|sp|Q6G9V0|SYP_STAAS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|49244545|emb|CAG42974.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476] Length = 567 Score = 216 bits (550), Expect = 6e-54, Method: Composition-based stats. Identities = 111/237 (46%), Positives = 163/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK D+ E Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSK-ESDYAANIEKA 236 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 75/231 (32%), Positives = 118/231 (51%), Gaps = 3/231 (1%) Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIV-EQWTAPYAATSDVHNEKLFDSLPENK 275 E +++ D + D +N V + E S Sbjct: 339 KEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGV 398 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD Sbjct: 399 AHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNHDD 458 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 GI+WP SV PF + LI+I R+ + +YA + DV +DD E+ G +F A Sbjct: 459 NGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEFNTK-FDVLYDDRQERAGVKFNDA 517 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 DL+G PL+++VG + S+ VE+K RLTG E++ +++++ ++++ N + Sbjct: 518 DLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDNLK 567 >gi|298694555|gb|ADI97777.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133] Length = 567 Score = 216 bits (550), Expect = 6e-54, Method: Composition-based stats. Identities = 115/282 (40%), Positives = 174/282 (61%), Gaps = 1/282 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK D+ E + Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSK-ESDYAANIEKAEVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 + Q + ++L D L + + Sbjct: 240 YEPNHKHTTVQSLEKIETPNVKTAQELADFLGRPVDEIVKTM 281 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 75/231 (32%), Positives = 118/231 (51%), Gaps = 3/231 (1%) Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIV-EQWTAPYAATSDVHNEKLFDSLPENK 275 E +++ D + D +N V + E S Sbjct: 339 KEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGV 398 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD Sbjct: 399 AHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNHDD 458 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 GI+WP SV PF + LI+I R+ + +YA + DV +DD E+ G +F A Sbjct: 459 NGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEFNTK-FDVLYDDRQERAGVKFNDA 517 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 DL+G PL+++VG + S+ VE+K RLTG E++ +++++ ++++ N + Sbjct: 518 DLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDNLK 567 >gi|258452562|ref|ZP_05700568.1| prolyl-tRNA synthetase [Staphylococcus aureus A5948] gi|257859780|gb|EEV82622.1| prolyl-tRNA synthetase [Staphylococcus aureus A5948] Length = 567 Score = 216 bits (550), Expect = 6e-54, Method: Composition-based stats. Identities = 111/237 (46%), Positives = 163/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK D+ E Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSK-ESDYAANIEKA 236 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 75/231 (32%), Positives = 118/231 (51%), Gaps = 3/231 (1%) Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIV-EQWTAPYAATSDVHNEKLFDSLPENK 275 E +++ D + D +N V + E S Sbjct: 339 KEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGV 398 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD Sbjct: 399 AHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQSLIMGCYGIGISRTLSAIVEQNHDD 458 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 GI+WP SV PF + LI+I R+ + +YA + DV +DD E+ G +F A Sbjct: 459 NGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEFNTK-FDVLYDDRQERAGVKFNDA 517 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 DL+G PL+++VG + S+ VE+K RLTG E++ +++++ ++++ N + Sbjct: 518 DLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDNLK 567 >gi|332670041|ref|YP_004453049.1| prolyl-tRNA synthetase [Cellulomonas fimi ATCC 484] gi|332339079|gb|AEE45662.1| prolyl-tRNA synthetase [Cellulomonas fimi ATCC 484] Length = 597 Score = 216 bits (550), Expect = 6e-54, Method: Composition-based stats. Identities = 106/277 (38%), Positives = 147/277 (53%), Gaps = 2/277 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S F+ L+E+P DAE+ASHKL++R G I + + GIY+WLPLG + L V A++REE Sbjct: 4 RLSTLFVRTLREDPADAEVASHKLLVRAGYIRRAAPGIYTWLPLGLRVLAKVEAVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA E+ P L + + +GR+ YG + RL DR + PTHEE+ T + + Sbjct: 64 AAAGAQEVHFPALLPKEPYEATGRWTEYGPNIFRLKDRKGGDYLLAPTHEELFTLLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T +QIQ K+RDE RPR G++R REF+MKDAYSFD+ G SY +Y Sbjct: 124 YSSYKDLPLTLFQIQTKYRDEARPRAGLIRGREFVMKDAYSFDVDDAGLDASYAAQRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 R+F RLGL+ + + A SG +GG S EF+ GE S + + T Sbjct: 184 QRVFERLGLEYVIVSATSGAMGGSRSEEFLTPTAIGEDTFVRSAGGYAANVEAVTTVAPP 243 Query: 242 IISLNSIVEQ--WTAPYAATSDVHNEKLFDSLPENKR 276 + + P T D D P R Sbjct: 244 ALDWSDAPAAHVEDTPDTPTIDTLVTVSNDRFPRADR 280 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 65/190 (34%), Positives = 103/190 (54%), Gaps = 5/190 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ ARGIE+GHIF G KY+ + T +GK V MG Sbjct: 406 GTVEAAEVRAGDPAPDGSGPLELARGIEIGHIFQLGRKYAQALGLTVLDQNGKSQVVTMG 465 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG RV+AA+ E++HD +G+ WP VAP + ++ D +A E + A+L Sbjct: 466 SYGIGVTRVLAALAEANHDDRGLAWPAHVAPAHVHVVATG-KDASVFEAAEDVAAQLVAR 524 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD G +FA A+L G PL V+VG + +++ VE++ R+ G + + +V Sbjct: 525 GVEVLYDDRPKVSPGVKFADAELFGVPLVVVVG-RGLAEGLVEVRPRVGGEPVQVPVADV 583 Query: 435 INYASHRFSN 444 + + + R + Sbjct: 584 VEHVAGRVAE 593 >gi|57651833|ref|YP_186139.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL] gi|81175020|sp|Q5HGG8|SYP_STAAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|57286019|gb|AAW38113.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL] Length = 567 Score = 216 bits (550), Expect = 6e-54, Method: Composition-based stats. Identities = 111/237 (46%), Positives = 163/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK D+ E Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSK-ESDYAANIEKA 236 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 75/231 (32%), Positives = 118/231 (51%), Gaps = 3/231 (1%) Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIV-EQWTAPYAATSDVHNEKLFDSLPENK 275 E +++ D + D +N V + E S Sbjct: 339 KEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGA 398 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD Sbjct: 399 AHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQSLIMGCYGIGISRTLSAIVEQNHDD 458 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 GI+WP SV PF + LI+I R+ + +YA + DV +DD E+ G +F A Sbjct: 459 NGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEFNTK-FDVLYDDRQERAGVKFNDA 517 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 DL+G PL+++VG + S+ VE+K RLTG E++ +++++ ++++ N + Sbjct: 518 DLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDNLK 567 >gi|87161679|ref|YP_493853.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194973|ref|YP_499773.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221385|ref|YP_001332207.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. Newman] gi|161509429|ref|YP_001575088.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142497|ref|ZP_03566990.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|262048155|ref|ZP_06021042.1| prolyl-tRNA synthetase [Staphylococcus aureus D30] gi|262051325|ref|ZP_06023548.1| prolyl-tRNA synthetase [Staphylococcus aureus 930918-3] gi|282920507|ref|ZP_06328228.1| prolyl-tRNA synthetase [Staphylococcus aureus A9765] gi|284024256|ref|ZP_06378654.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132] gi|294848259|ref|ZP_06789006.1| prolyl-tRNA synthetase [Staphylococcus aureus A9754] gi|304381173|ref|ZP_07363826.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|114152254|sp|Q2FHH5|SYP_STAA3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114152255|sp|Q2G1Z4|SYP_STAA8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|172049021|sp|A6QGG3|SYP_STAAE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|189083518|sp|A8Z3U3|SYP_STAAT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|87127653|gb|ABD22167.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202531|gb|ABD30341.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374185|dbj|BAF67445.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. Newman] gi|160368238|gb|ABX29209.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|259160700|gb|EEW45721.1| prolyl-tRNA synthetase [Staphylococcus aureus 930918-3] gi|259163721|gb|EEW48276.1| prolyl-tRNA synthetase [Staphylococcus aureus D30] gi|282594169|gb|EFB99156.1| prolyl-tRNA synthetase [Staphylococcus aureus A9765] gi|294825059|gb|EFG41481.1| prolyl-tRNA synthetase [Staphylococcus aureus A9754] gi|302751086|gb|ADL65263.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340156|gb|EFM06097.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315198505|gb|EFU28834.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01] gi|320140920|gb|EFW32767.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA131] gi|320144364|gb|EFW36130.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA177] gi|329313933|gb|AEB88346.1| Prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131] gi|329727831|gb|EGG64282.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus 21189] Length = 567 Score = 216 bits (550), Expect = 6e-54, Method: Composition-based stats. Identities = 111/237 (46%), Positives = 163/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK D+ E Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSK-ESDYAANIEKA 236 Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats. Identities = 75/231 (32%), Positives = 118/231 (51%), Gaps = 3/231 (1%) Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIV-EQWTAPYAATSDVHNEKLFDSLPENK 275 E +++ D + D +N V + E S Sbjct: 339 KEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGV 398 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD Sbjct: 399 AHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQSLIMGCYGIGISRTLSAIVEQNHDD 458 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 GI+WP SV PF + LI+I R+ + +YA + DV +DD E+ G +F A Sbjct: 459 NGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEFNTK-FDVLYDDRQERAGVKFNDA 517 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 DL+G PL+++VG + S+ VE+K RLTG E++ +++++ ++++ N + Sbjct: 518 DLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDNLK 567 >gi|82750864|ref|YP_416605.1| prolyl-tRNA synthetase [Staphylococcus aureus RF122] gi|114152256|sp|Q2YXK5|SYP_STAAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|82656395|emb|CAI80814.1| prolyl-tRNA synthetase [Staphylococcus aureus RF122] Length = 567 Score = 216 bits (550), Expect = 6e-54, Method: Composition-based stats. Identities = 115/282 (40%), Positives = 174/282 (61%), Gaps = 1/282 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGTELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK D+ E + Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSK-ESDYAANIEKAEVV 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 + Q + ++L D L + + Sbjct: 240 YEPNHKHTTVQSLEKIETPNVKTAQELADFLGRPVDEIVKTM 281 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 67/166 (40%), Positives = 103/166 (62%), Gaps = 2/166 (1%) Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD GI+W Sbjct: 404 GIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNHDDNGIVW 463 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P SV PF + LI+I R+ + +YA + DV +DD E+ G +F ADL+G Sbjct: 464 PKSVTPFDLHLISINPKKDDQRELADALYAEFNTK-FDVLYDDRQERAGVKFNDADLIGL 522 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 PL+++VG + S+ VE+K RLTG E++ + +++ ++++ N + Sbjct: 523 PLRIVVGKR-ASEGIVEVKERLTGDSEEVHIADLMTVITNKYDNLK 567 >gi|15924253|ref|NP_371787.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50] gi|15926846|ref|NP_374379.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315] gi|21282875|ref|NP_645963.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2] gi|148267753|ref|YP_001246696.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9] gi|150393812|ref|YP_001316487.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1] gi|156979584|ref|YP_001441843.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3] gi|253315619|ref|ZP_04838832.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253733499|ref|ZP_04867664.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130] gi|255006050|ref|ZP_05144651.2| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795681|ref|ZP_05644660.1| prolyl-tRNA synthetase [Staphylococcus aureus A9781] gi|258416084|ref|ZP_05682352.1| prolyl-tRNA synthetase [Staphylococcus aureus A9763] gi|258421667|ref|ZP_05684591.1| prolyl-tRNA synthetase [Staphylococcus aureus A9719] gi|258434823|ref|ZP_05688897.1| prolyl-tRNA synthetase [Staphylococcus aureus A9299] gi|258444601|ref|ZP_05692930.1| prolyl-tRNA synthetase [Staphylococcus aureus A8115] gi|258447566|ref|ZP_05695710.1| prolyl-tRNA synthetase [Staphylococcus aureus A6300] gi|258449408|ref|ZP_05697511.1| prolyl-tRNA synthetase [Staphylococcus aureus A6224] gi|258454787|ref|ZP_05702751.1| prolyl-tRNA synthetase [Staphylococcus aureus A5937] gi|269202880|ref|YP_003282149.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98] gi|282892751|ref|ZP_06300986.1| prolyl-tRNA synthetase [Staphylococcus aureus A8117] gi|295406200|ref|ZP_06816007.1| prolyl-tRNA synthetase [Staphylococcus aureus A8819] gi|296274821|ref|ZP_06857328.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1] gi|297208091|ref|ZP_06924522.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297244428|ref|ZP_06928311.1| prolyl-tRNA synthetase [Staphylococcus aureus A8796] gi|300912172|ref|ZP_07129615.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70] gi|81175021|sp|Q99UK9|SYP_STAAM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|81175022|sp|Q7A5Y3|SYP_STAAN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|81175025|sp|Q7A120|SYP_STAAW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|166980161|sp|A7X1P3|SYP_STAA1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|189083516|sp|A6U182|SYP_STAA2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|189083517|sp|A5ISE7|SYP_STAA9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|13701063|dbj|BAB42358.1| proline-tRNA ligase [Staphylococcus aureus subsp. aureus N315] gi|14247033|dbj|BAB57425.1| proline-tRNA ligase [Staphylococcus aureus subsp. aureus Mu50] gi|21204314|dbj|BAB95011.1| proline-tRNA ligase [Staphylococcus aureus subsp. aureus MW2] gi|147740822|gb|ABQ49120.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9] gi|149946264|gb|ABR52200.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1] gi|156721719|dbj|BAF78136.1| proline-tRNA ligase [Staphylococcus aureus subsp. aureus Mu3] gi|253728553|gb|EES97282.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130] gi|257789653|gb|EEV27993.1| prolyl-tRNA synthetase [Staphylococcus aureus A9781] gi|257839232|gb|EEV63708.1| prolyl-tRNA synthetase [Staphylococcus aureus A9763] gi|257842353|gb|EEV66778.1| prolyl-tRNA synthetase [Staphylococcus aureus A9719] gi|257849184|gb|EEV73166.1| prolyl-tRNA synthetase [Staphylococcus aureus A9299] gi|257850094|gb|EEV74047.1| prolyl-tRNA synthetase [Staphylococcus aureus A8115] gi|257853757|gb|EEV76716.1| prolyl-tRNA synthetase [Staphylococcus aureus A6300] gi|257857396|gb|EEV80294.1| prolyl-tRNA synthetase [Staphylococcus aureus A6224] gi|257863170|gb|EEV85934.1| prolyl-tRNA synthetase [Staphylococcus aureus A5937] gi|262075170|gb|ACY11143.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98] gi|282764748|gb|EFC04873.1| prolyl-tRNA synthetase [Staphylococcus aureus A8117] gi|285816945|gb|ADC37432.1| Prolyl-tRNA synthetase [Staphylococcus aureus 04-02981] gi|294968788|gb|EFG44810.1| prolyl-tRNA synthetase [Staphylococcus aureus A8819] gi|296887334|gb|EFH26236.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297178458|gb|EFH37704.1| prolyl-tRNA synthetase [Staphylococcus aureus A8796] gi|300886418|gb|EFK81620.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70] gi|312829657|emb|CBX34499.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315131057|gb|EFT87041.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03] gi|329727670|gb|EGG64126.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus 21172] Length = 567 Score = 216 bits (550), Expect = 6e-54, Method: Composition-based stats. Identities = 111/237 (46%), Positives = 163/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK D+ E Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSK-ESDYAANIEKA 236 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 75/231 (32%), Positives = 118/231 (51%), Gaps = 3/231 (1%) Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIV-EQWTAPYAATSDVHNEKLFDSLPENK 275 E +++ D + D +N V + E S Sbjct: 339 KEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGV 398 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD Sbjct: 399 AHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNHDD 458 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 GI+WP SV PF + LI+I R+ + +YA + DV +DD E+ G +F A Sbjct: 459 NGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEFNTK-FDVLYDDRQERAGVKFNDA 517 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 DL+G PL+++VG + S+ VE+K RLTG E++ +++++ ++++ N + Sbjct: 518 DLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDNLK 567 >gi|329733665|gb|EGG69993.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus 21193] Length = 567 Score = 216 bits (550), Expect = 6e-54, Method: Composition-based stats. Identities = 111/237 (46%), Positives = 163/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK D+ E Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSK-ESDYAANIEKA 236 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 75/231 (32%), Positives = 118/231 (51%), Gaps = 3/231 (1%) Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIV-EQWTAPYAATSDVHNEKLFDSLPENK 275 E +++ D + D +N V + E S Sbjct: 339 KEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGV 398 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 A GIEVG +F GTKYS M+ATF GK + MG YGIG R ++A++E +HD Sbjct: 399 AHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNHDD 458 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 GI+WP SV PF + LI+I R+ + +YA + DV +DD E+ G +F A Sbjct: 459 NGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEFNTK-FDVLYDDRQERAGVKFNDA 517 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 DL+G PL+++VG + S+ VE+K RLTG E++ +++++ ++++ N + Sbjct: 518 DLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDNLK 567 >gi|148284343|ref|YP_001248433.1| threonyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong] gi|166225471|sp|A5CD12|SYT_ORITB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|146739782|emb|CAM79649.1| threonyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong] Length = 648 Score = 216 bits (550), Expect = 6e-54, Method: Composition-based stats. Identities = 72/451 (15%), Positives = 148/451 (32%), Gaps = 53/451 (11%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L ++G+ W G + I + R G Sbjct: 232 YLHRLSEAQKRDHRKLGRELELF--HFQDEAQGMPFWHDKGWTIFKIIKNYISCQIQRAG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADR--------------NDKAMIYGPTHE 111 IE++ P + S LW +SG ++ + + M L A+ P + Sbjct: 290 YIEVNTPMVLSQKLWEKSGHWEKFRENMFTLDTNVAEKDHNLIKDSIETKCALALKPMNC 349 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 IF IKSYR+LP + R E +G+MR R F+ DA+ F + + Sbjct: 350 PGHIQIFNYTIKSYRDLPLRMAEFGSCHRYEPSGALYGLMRVRSFVQDDAHIFCTEDQIT 409 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + +++ G + ++ P + D Sbjct: 410 DETIKFCH-LLKQVYQDFGFPEVKIKFSDRPEKR-----------------AGTDKIWDK 451 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + +I A Y + L D++ + ++ F Sbjct: 452 AEQALIHAIQTLGEEYTINRGEGAFYGPKLEFI---LTDAIGREWQCGTLQVD----FVL 504 Query: 291 GTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 + ++A++ ++G + +G+ ++ + G+ IW I Sbjct: 505 PER----LNASYISSEGSKKRPVILHRAILGSFERFIGILIEHYSGRLPIWLA-----PI 555 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 + + D+ ++++ L D ++I + PL I+G K Sbjct: 556 QVAVVSITDEAVN-YAKQLHQELIDNNIRSTLDISNQKINYKIRNFFTAKVPLIAILGKK 614 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 K+ I+ + ++ +S E+I + Sbjct: 615 ESESGKIAIRTLGSQEQQVISSSELIAHIRK 645 >gi|305681315|ref|ZP_07404122.1| proline--tRNA ligase [Corynebacterium matruchotii ATCC 14266] gi|305659520|gb|EFM49020.1| proline--tRNA ligase [Corynebacterium matruchotii ATCC 14266] Length = 666 Score = 216 bits (550), Expect = 6e-54, Method: Composition-based stats. Identities = 102/282 (36%), Positives = 150/282 (53%), Gaps = 5/282 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G I + + G+Y+WLPLG + L + ++REE Sbjct: 86 RLSSLFLRTLREDPADAEVPSHKLLVRAGYIRRAAPGVYTWLPLGLRTLRKIEKVVREEM 145 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ P L S + + ++ R+ YG + RL DR M+ GPTHEE+ + Sbjct: 146 DNIGAQELLFPALLSREPYEQTRRWTEYGDNLFRLKDRKGNDMLLGPTHEEMFARQVKDM 205 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSFD+T G + SY +Y Sbjct: 206 FTSYKDFPVTLYQIQTKYRDEERPRAGILRGREFVMKDSYSFDMTDAGLEQSYLAHRAAY 265 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 IF RL L+ +A SG +GG S EF+ ++ GE F D+ E Sbjct: 266 QAIFDRLNLEYAICKATSGAMGGSASEEFLAISPNGE-DTFVRATEGDYAANVEAVTT-- 322 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 + + P A + +L + + I+ Sbjct: 323 --QPGTTRDFTNLPEAVVHETPESTTIAALVDWANGAGITID 362 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 57/188 (30%), Positives = 92/188 (48%), Gaps = 6/188 (3%) Query: 260 SDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +V + D P+ + V RGIE+GHIF G KY+ GK MGSY Sbjct: 482 VEVAEIREGDPAPDGQGVLTLERGIEIGHIFQLGRKYTEVFDVQILDEHGKRTIPTMGSY 541 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+V + E HD G+ WP VAP+++ ++ D+ A + I A+L G Sbjct: 542 GIGISRLVGVIAEQHHDDNGLNWPVEVAPYQVHVVVAN-KDKAALAAGDDIVAQLDATGV 600 Query: 378 DVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V +DD G +F ++LLG P V++G + S+ VE++ R G ++ ++++ Sbjct: 601 EVLFDDRPKVSPGVKFKDSELLGMPYIVVLG-RSFSNGIVELRIRG-GETLEVPAADIVD 658 Query: 437 YASHRFSN 444 + Sbjct: 659 TVTKLIHK 666 >gi|160943529|ref|ZP_02090762.1| hypothetical protein FAEPRAM212_01020 [Faecalibacterium prausnitzii M21/2] gi|158445208|gb|EDP22211.1| hypothetical protein FAEPRAM212_01020 [Faecalibacterium prausnitzii M21/2] gi|295103777|emb|CBL01321.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Faecalibacterium prausnitzii SL3/3] Length = 594 Score = 216 bits (550), Expect = 6e-54, Method: Composition-based stats. Identities = 72/439 (16%), Positives = 155/439 (35%), Gaps = 40/439 (9%) Query: 12 QENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD ++ L M +G+ +LP G + I+E++ G + + Sbjct: 189 EARERDHRKIGKEMGLF--MTDDLVGRGLPMFLPAGYTVWQELENYIKEKERARGYLHVM 246 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + + +L+ SG +D Y + M + ++ + P + I+ + SYR+LP Sbjct: 247 TPCIGTVNLYKTSGHWDHYRENMFPAMEMEGESYVLRPMNCPHHMMIYANRPHSYRDLPM 306 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 +I FR E G+ R R F DA+ F + + ++ Sbjct: 307 RIGEIAHDFRYESSGTLKGIERGRHFCQNDAHLFCTPEQIKSE-VANVCDLIFEVYKDFN 365 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDIISLNSI 248 + D + + + D + + ++ + Sbjct: 366 ITDYRCVLSLR--------------DPADKKKYHDDDAMWNHAEQALREVLTELGIHFTE 411 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A Y DV + ++ +S ++ F K+ T+ DG Sbjct: 412 EIGEAAFYGPKLDV---NVKPAVGAEYTLSTCQLD----FCLPAKF----HLTYVDKDGS 460 Query: 309 DHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + + +G++ A + + +P +AP ++ ++ + + + + Sbjct: 461 EKTPVVLHRAILGSLDRFMAYLI---EETKGKFPTWLAPTQVKVLPV---SEKTLEYAQD 514 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLL-GFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + +LS G V DD ++IG + A + P +++G+K + ++ R G Sbjct: 515 VTEKLSDAGIRVVLDDDNQKIGYKIRAAQQVDRVPYMLVLGAKEAEAGNISVRDRK-GET 573 Query: 427 EDMSLEEVINYASHRFSNN 445 +MSLE+ I + Sbjct: 574 AEMSLEDFIAKVTTEIRTR 592 >gi|269940754|emb|CBI49136.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20] Length = 567 Score = 216 bits (550), Expect = 6e-54, Method: Composition-based stats. Identities = 111/237 (46%), Positives = 163/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK D+ E Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSK-ESDYAANIEKA 236 Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats. Identities = 70/188 (37%), Positives = 110/188 (58%), Gaps = 4/188 (2%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D + L + V+ GIEVG +F GTKYS M+ATF GK + MG YG Sbjct: 382 DFRFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQSLIMGCYG 441 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R ++A++E +HD GI+WP SV PF + LI+I R+ + +YA + D Sbjct: 442 IGISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEFNTK-FD 500 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V +DD E+ G +F ADL+G PL+++VG + S+ VE+K RLTG E++ +++++ Sbjct: 501 VLYDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVI 559 Query: 439 SHRFSNNR 446 ++++ N + Sbjct: 560 TNKYDNLK 567 >gi|297626631|ref|YP_003688394.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922396|emb|CBL56968.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 588 Score = 216 bits (550), Expect = 7e-54, Method: Composition-based stats. Identities = 118/385 (30%), Positives = 175/385 (45%), Gaps = 19/385 (4%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 SK F+ L+++P AEI SH+ ++R G I + + GIYSWLPLG K L V I+REE + Sbjct: 1 MSKLFVRTLRDDPAAAEIPSHRFLVRAGYIRRVAPGIYSWLPLGLKVLQRVENIVREEMD 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ +P L + + S R+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 61 AMGGQEVLLPALLPREPYEISNRWAEYGPNLFRLVDRKGADMLLGPTHEEMFTLLVKDLY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSFD+ EG SY K +Y+ Sbjct: 121 SSYKDLPVILYQIQTKYRDEARPRAGILRGREFVMKDSYSFDVDDEGLDASYLKHRDAYI 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RIF RLG + + ++A +G +GG S EF+ L++ GE S + + D Sbjct: 181 RIFDRLGFEYVIVKANAGAMGGSASEEFLALSENGEDTFVRSAGGYAANVEAVTVPVPD- 239 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 ++ AP A D + D+L ++ R + G + T Sbjct: 240 -----PIDFTDAPPARVVDTPDVPTIDTLV--ALLNERYPREDRAWQAGDTLKNVVFMTV 292 Query: 303 --KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAP-FKISLINIKAHDQ 359 G G + R+ AV S + K + + Sbjct: 293 APDGTRAPLVIGLPGDRDVDPDRLAVAVEPSVIEPFEDEDFKRYPGLVKGYIGPVLDGAA 352 Query: 360 VCRDACEKIYARLSKVGCDVFWDDM 384 + + G D Sbjct: 353 LLGEKA--------SSGVRYLLDPR 369 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 63/183 (34%), Positives = 98/183 (53%), Gaps = 4/183 (2%) Query: 258 ATSDVHNEKLFDSLPE--NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +DV + + D P+ ARG+E+GHIF G KY+ + +GK V MG Sbjct: 400 GVADVADVREGDPAPDNSGPLTLARGVEMGHIFQLGRKYAESLDLKVLDKNGKLVTVTMG 459 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R V + ES+ D KG+ WP VAPF++ ++ + +A +I +L Sbjct: 460 SYGIGVSRAVGMIAESTCDDKGLCWPAEVAPFQVQIVATGKGGE-ILEAATRIAEQLDAA 518 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G V DD G +F A+LLG P ++VG + ++D VE++ R TG + ++S+EE + Sbjct: 519 GVRVLLDDRKASPGVKFTDAELLGMPTSLVVG-RGLADGVVELRDRKTGSKREVSVEEAV 577 Query: 436 NYA 438 + Sbjct: 578 DEV 580 >gi|21224048|ref|NP_629827.1| prolyl-tRNA synthetase [Streptomyces coelicolor A3(2)] gi|256784874|ref|ZP_05523305.1| prolyl-tRNA synthetase [Streptomyces lividans TK24] gi|289768768|ref|ZP_06528146.1| prolyl-tRNA synthetase [Streptomyces lividans TK24] gi|15214317|sp|Q9KYR6|SYP_STRCO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|7801271|emb|CAB91135.1| prolyl tRNA synthetase [Streptomyces coelicolor A3(2)] gi|289698967|gb|EFD66396.1| prolyl-tRNA synthetase [Streptomyces lividans TK24] Length = 567 Score = 216 bits (549), Expect = 7e-54, Method: Composition-based stats. Identities = 103/238 (43%), Positives = 144/238 (60%), Gaps = 1/238 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R SK L+++P DAE+ SHKL++R G + + + G++SWLPLG+K L N+ I+REE Sbjct: 8 RMSKLMAKTLRDDPADAEVLSHKLLVRAGYVRRTAAGLWSWLPLGKKVLGNIERIVREEM 67 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + +GR+ YG E+ RL DR + GPTHEE+ T + + Sbjct: 68 DAIGAQEVQLPALLPREPYEATGRWQEYGPELFRLQDRKGGDYLLGPTHEEIFTLLVKDQ 127 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REFLMKD+YSFD+ EG SY +Y Sbjct: 128 ASSYKDLPVILYQIQNKYRDEARPRAGILRGREFLMKDSYSFDVADEGLAESYALHRAAY 187 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 RIF RLGL + A +G +GG S EF+ A+ GE F D+ +E F Sbjct: 188 QRIFERLGLDYRIVAATAGAMGGSKSEEFLAPAEAGE-DTFADCPNCDYAANTEAITF 244 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 6/175 (3%) Query: 269 DSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P R IE+GHIF G KY+ + G +GK V MGSYGIG R VA Sbjct: 396 DPCPNCGTGLKLDRAIEIGHIFQLGRKYADALKLDVLGQNGKPARVTMGSYGIGVSRAVA 455 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-G 385 A+ E D KG++W VAP + + A + + ++ +L+ G V DD G Sbjct: 456 ALAEQHADDKGLVWSKEVAPADVH--VVAAGKALQTELALEVSDKLAAAGVRVLVDDRAG 513 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 G +F A+L+G P ++ G + + VE+K R TG RE++++EE + + Sbjct: 514 VSPGVKFTDAELIGVPQILVAGRRS-GEGVVELKDRRTGEREEVTVEEALTRLTS 567 >gi|325962798|ref|YP_004240704.1| prolyl-tRNA synthetase, family II [Arthrobacter phenanthrenivorans Sphe3] gi|323468885|gb|ADX72570.1| prolyl-tRNA synthetase, family II [Arthrobacter phenanthrenivorans Sphe3] Length = 603 Score = 216 bits (549), Expect = 7e-54, Method: Composition-based stats. Identities = 109/270 (40%), Positives = 152/270 (56%), Gaps = 6/270 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+E+P DAE+ASH+L++R G I + + GIY+WLPLG L V A+IREE Sbjct: 4 RLSQLFLRTLREDPVDAEVASHRLLVRAGYIRRAAPGIYTWLPLGLSVLRKVEAVIREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA E+ P L + + + R+ YG+ + RL DR + PTHEE+ T + + Sbjct: 64 AAIGAQEVHFPALLPREPYEATNRWTEYGEGLFRLQDRKGADYLLAPTHEEMFTLLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP + YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G SY +Y Sbjct: 124 YSSYKDLPLSLYQIQNKYRDEARPRAGLLRGREFIMKDSYSFDVDDAGLDASYAAHRGAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 LRIF RLGL+ IP+ A +G +GG S EF+ D GE S + + T Sbjct: 184 LRIFERLGLEVIPVTATAGAMGGSKSEEFLHPTDIGEDTFVRSAGGYAANVEAVTTVVP- 242 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 ++ AP A D + D+L Sbjct: 243 -----GEIDFTGAPAAVVRDTPDTPTIDTL 267 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 65/240 (27%), Positives = 114/240 (47%), Gaps = 5/240 (2%) Query: 209 EFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLF 268 E ++ A++ ++ + + + +V + + + Sbjct: 366 ESLLGAESATKLLYLVDPRVVRGTAWITGANEAGKHVYGLVAGRDFTWDGVIECTEVREG 425 Query: 269 DSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P+ ARGIE+GHIF G KY+ + +GK V MGSYG+G R VA Sbjct: 426 DPAPDGSGPLEIARGIEMGHIFQLGRKYAEALELKVLDQNGKQVTVTMGSYGVGVTRAVA 485 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-G 385 A+ ES+HD +G++WP +VAP + ++ + + E++ A L G DV DD Sbjct: 486 ALAESNHDARGLVWPRAVAPADVHVVAVGKG-EEIFATAERLAAELEAAGLDVLLDDRPK 544 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 G +F A+L+G P + VG + + D VEIK R +G E++++++ ++Y + + Sbjct: 545 VSPGVKFGDAELVGVPTILAVG-RGLVDGVVEIKDRRSGEAENVAVDKAVDYVVNAVRAS 603 >gi|87303299|ref|ZP_01086092.1| Threonyl-tRNA synthetase, class IIa [Synechococcus sp. WH 5701] gi|87282194|gb|EAQ74155.1| Threonyl-tRNA synthetase, class IIa [Synechococcus sp. WH 5701] Length = 603 Score = 216 bits (549), Expect = 7e-54, Method: Composition-based stats. Identities = 67/428 (15%), Positives = 127/428 (29%), Gaps = 36/428 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + RD L L + + + G+ W P G + + R+ Sbjct: 182 LAEYKHRKQEALRRDHRRLGTDLQLFS-IEDEAGAGLVFWHPRGARMRLLIEDFWRQAHF 240 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P + LW SG D Y + M +++ P + + S + Sbjct: 241 AAGYDLLYTPHVADLSLWKTSGHLDFYSESMFGPMQVDERQYQLKPMNCPFHVLTYASTL 300 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR LP + ++ +R E G+MR R F DA+ F L + Sbjct: 301 RSYRELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHIFCLPEQIGDEIL------- 353 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + + H + V T + D D Sbjct: 354 -----------GVLNLTETILSSFDFHTYEVNLSTRPEKSIGDDAVWDLATTGLIEALDR 402 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ K+ D++ + S ++ F ++ L A Sbjct: 403 KGWPYKIDEGGGAFYGPKIDI---KIEDAIGRMWQCSTIQLD----FNLPERFDLHYVAA 455 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + + + R ++E+ Sbjct: 456 --DGSRQRPIMIHRAIFGSLERFFGIMVENYAGDFPFWLAPEQVRLLPVT-------DEV 506 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E++ +L G D G+++G + P+ ++G+K V ++ R Sbjct: 507 IPYAEEVLGQLRSAGVRAAIDRSGDRLGKLIRHGEQQKIPVLAVIGAKEAEQGSVSLRSR 566 Query: 422 LTGIREDM 429 G + Sbjct: 567 RDGDLGSV 574 >gi|296171596|ref|ZP_06852836.1| proline--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894051|gb|EFG73813.1| proline--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 582 Score = 216 bits (549), Expect = 7e-54, Method: Composition-based stats. Identities = 96/246 (39%), Positives = 140/246 (56%), Gaps = 1/246 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ SHKL++R G I + G+YSWLPLG + L + I+REE Sbjct: 4 RMSELFLRTLRDDPADAEVPSHKLLIRAGYIRPVAPGLYSWLPLGLRVLRRIERIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ P L + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 64 DAIGGQEILFPALLPRAPYETTNRWTEYGDGVFRLKDRRGNDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ K+RDE RPR G++R REFLMKD+YSFD+ G K +Y+ +Y Sbjct: 124 YSSYKDFPVLLYQIQNKYRDEARPRAGILRVREFLMKDSYSFDIDDAGLKAAYHAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGET-QVFCSKDFMDFPIPSENTDFD 240 RIF+RL ++ + + A SG +GG S EF+ + GE V C + + + T Sbjct: 184 QRIFNRLRVRYVIVSAVSGAMGGSASEEFLAESPVGEDTFVRCLESGYAANVEAVVTARP 243 Query: 241 DIISLN 246 + + Sbjct: 244 ETRPIE 249 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 64/176 (36%), Positives = 92/176 (52%), Gaps = 4/176 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ VSARGIEV HIF G KY+ +A G DGK + MG Sbjct: 395 GTIEAAEVRDGDPSPDGAGPLVSARGIEVAHIFQLGRKYTDAFAADVLGEDGKPVRLTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R+VA + E HD G+ WP SVAPF + L I D R + L ++ Sbjct: 455 SYGLGVSRMVAVIAEQHHDELGLRWPSSVAPFDVHL-VIANKDAEARTGATGLATDLDRL 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 G +V DD G +F A+LLG P ++VG + ++ VE++ R G ++++ Sbjct: 514 GVEVLLDDRQASPGVKFKDAELLGVPWILVVG-RGWANGVVELRDRFGGQTRELAV 568 >gi|73981327|ref|XP_860843.1| PREDICTED: similar to threonyl-tRNA synthetase-like 1 isoform 6 [Canis familiaris] Length = 701 Score = 216 bits (549), Expect = 7e-54, Method: Composition-based stats. Identities = 91/444 (20%), Positives = 154/444 (34%), Gaps = 43/444 (9%) Query: 8 LPILQENPRDAEIASHKLMLRT---GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 L +E +AE+ H+ + + H+ S G +LP G + + + A IR E R Sbjct: 287 LRAWEEWKGEAELRDHRRIGKAQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYTRR 346 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ PTL SA LW SG ++ Y ++M L D + P + +F +S Sbjct: 347 GFSEVKTPTLFSAKLWELSGHWEHYQEDMFVLHHSTDT-LALKPMNCPAHCLMFAHRPRS 405 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 +R LP + R E G+ R R F DA+ F P+ + Sbjct: 406 WRELPLRLADFGVLHRAEASGSLGGLTRLRCFQQDDAHIFCA-PDQLEEEIQGCLDFLRS 464 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ LG + P G D ++ Sbjct: 465 VYAVLGFSFRLA-LSTRPSGF-----------------LGESCLWDQAEQVLQRALEEFG 506 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y DVH L D+L + ++ F ++ +K Sbjct: 507 EPWDLKPGDGAFYGPKIDVH---LHDALGRPHQCGTIQLD----FQLPLRFD----LQYK 555 Query: 304 GADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G G + V + +G++ + V+ + G WP ++PF++ +I + Sbjct: 556 GQAGVLERPVLIHRAVLGSVERMLGVLA---ESYGGKWPLWLSPFQVVVIPVG---AEQE 609 Query: 363 DACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + RL G D D G + + A L + Q +VG K S V I+ R Sbjct: 610 EYAREAQQRLQAAGLVCDLDADSGLTLSRRVRRAQLAHYNFQFVVGQKEQSKKTVNIRTR 669 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 + L E + + Sbjct: 670 DNRQLGERDLTEAVQRLLELQNTR 693 >gi|68536143|ref|YP_250848.1| threonyl-tRNA synthetase [Corynebacterium jeikeium K411] gi|123748238|sp|Q4JVC7|SYT_CORJK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|68263742|emb|CAI37230.1| thrS [Corynebacterium jeikeium K411] Length = 691 Score = 216 bits (549), Expect = 7e-54, Method: Composition-based stats. Identities = 64/458 (13%), Positives = 135/458 (29%), Gaps = 49/458 (10%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD +L L + + G + P G + R+ Sbjct: 254 LAEYQTMMAEAEKRDHRRLGQELDLFS-FPDEIGSGFPVFHPDGGIVRLEMEEHSRKRHI 312 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND------------KAMIYGPTH 110 +G ++ P + DL+ +SG D Y M + + P + Sbjct: 313 ASGYSFVNTPHVTKGDLFQKSGHLDFYADGMFPPMQLDGETDDEGNVTKPAQDYYAKPMN 372 Query: 111 EEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEG 169 + IF S +SYR LP ++ +R E G+ R+R F DA+ + T + Sbjct: 373 CPMHNLIFASRGRSYRELPLRLFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYC-TEDQ 431 Query: 170 SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMD 229 + + + + GL + + + S + + Sbjct: 432 LEQELTTVLEFIISLLRDYGLDDFYLELST----------------KDPNKFVGSDEIWE 475 Query: 230 FPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY 289 A Y + + D++ ++S ++ F Sbjct: 476 RSTEILERVATKSGLELVPDPAGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FN 528 Query: 290 FGTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 ++ + + DG + G++ V+ + G W Sbjct: 529 LPERF----NLEYTAPDGSKQRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVVG 584 Query: 349 ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGS 408 I + + E A L G D +++ + P ++VG Sbjct: 585 IPVA------DEFNEYLENFAADLRAQGIRAEVDTSDDRMQKKIRNHTTGKVPFMLLVGG 638 Query: 409 KFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 + V + V + + E+ + S+ + R Sbjct: 639 RDVEANAVSFRFLDGTQVNGVPREDALRIISNWIAERR 676 >gi|326674558|ref|XP_002664809.2| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like, partial [Danio rerio] Length = 441 Score = 216 bits (549), Expect = 7e-54, Method: Composition-based stats. Identities = 75/438 (17%), Positives = 146/438 (33%), Gaps = 42/438 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD L H S G ++P G + + I+ E R G E+ Sbjct: 37 EEARRRDHRRIGKAQELF--FFHDVSPGSCFFMPKGAHIYNTLTDFIKSEYRRRGFSEVV 94 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 PTL S LW SG + Y + M ++ P + +F ++S+R +P Sbjct: 95 TPTLFSTALWERSGHWQHYSENMFSVSSET-HTFALKPMNCPAHCVMFEQRLRSWREMPI 153 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+E G+ R R F DA+ F TPE + ++ G Sbjct: 154 RWADFGALHRNEASGTLGGLTRVRRFCQDDAHIFC-TPEQLEQEITACLDFVRSVYRVFG 212 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + P D + + Sbjct: 213 FSFHCL-LSTRPASS-----------------MGDSALWDCAEQQLESSLKLFQERWELN 254 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + + ++ F ++ + + GADG+ Sbjct: 255 PGDGAFYGPKIDIL---IRDALGRQHQCATIQLD----FQLPIRF----NLQYVGADGQM 303 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + +G++ + A++ + G WP ++P ++ ++ + + +++ Sbjct: 304 KRPIMIHRAVLGSLERMIAILA---ENFGGKWPFWLSPAQVMVVPVGGSSE---AYAQQV 357 Query: 369 YARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +RL + G DD G + + A L + +VG K V ++ R Sbjct: 358 VSRLREAGFMADIDDDHGNTLNKKIRSAQLAQYNYIFVVGEKESECGTVSVRTRAGQQIG 417 Query: 428 DMSLEEVINYASHRFSNN 445 +LE+V+ + Sbjct: 418 QKTLEDVMKTLTQLTETR 435 >gi|88855365|ref|ZP_01130029.1| prolyl-tRNA synthetase [marine actinobacterium PHSC20C1] gi|88815272|gb|EAR25130.1| prolyl-tRNA synthetase [marine actinobacterium PHSC20C1] Length = 593 Score = 216 bits (549), Expect = 7e-54, Method: Composition-based stats. Identities = 99/245 (40%), Positives = 145/245 (59%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ F+ L+E+P DAE+ASH+L++R G I + + G+++WLPLG K + AIIREE Sbjct: 4 RLSQLFVRTLREDPVDAEVASHRLLVRAGYIRRQAPGVFAWLPLGLKVRRKIEAIIREEL 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA E+ P L + + +GR+ YG + RL DR D + PTHEEV T + + Sbjct: 64 ESFGAQEVLFPALLPREPYELTGRWTEYGDGIFRLKDRKDADYLLAPTHEEVFTLLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP + YQIQ K+RDE RPR G++R REF MKD+YSFD T G SY + +Y Sbjct: 124 YSSYKDLPLSLYQIQDKYRDEARPRAGLLRGREFSMKDSYSFDYTDAGLDLSYQQHRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF RLGL+ + + A++G +GG S EF+ GE + + + T + Sbjct: 184 ERIFTRLGLEYVVVSADAGAMGGSKSEEFLHPTPIGEDTFVRTAGGYAANVEAYRTTPPE 243 Query: 242 IISLN 246 + ++ Sbjct: 244 ALPID 248 Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 61/180 (33%), Positives = 98/180 (54%), Gaps = 5/180 (2%) Query: 258 ATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T +V + + D P+ RG+E+GH+F G KY+ + +GK V MG Sbjct: 410 GTVEVSDVRAGDPAPDGSGPIETARGMEIGHVFQLGRKYAEVLGLKVLDENGKLVTVTMG 469 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R++AA+ E+++DGKG++WP +++PF + ++ D V + E + L Sbjct: 470 SYGIGVTRLMAAIAETTNDGKGLLWPKNISPFDVHIVAAG-KDAVVFETAESLVTTLESA 528 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV +DD G +F A+LLG P VIVG + ++ VE+ R+T R ++ +V Sbjct: 529 GLDVLFDDRVKVSPGVKFGDAELLGVPKIVIVG-RDAANGMVEVWDRVTNERTSTAIADV 587 >gi|323441042|gb|EGA98749.1| prolyl-tRNA synthetase [Staphylococcus aureus O11] gi|323443911|gb|EGB01522.1| prolyl-tRNA synthetase [Staphylococcus aureus O46] Length = 567 Score = 216 bits (549), Expect = 7e-54, Method: Composition-based stats. Identities = 112/237 (47%), Positives = 164/237 (69%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF E +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEESLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK D+ E Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSK-ESDYAANIEKA 236 Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats. Identities = 70/188 (37%), Positives = 110/188 (58%), Gaps = 4/188 (2%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D + L + V+ GIEVG +F GTKYS M+ATF GK + MG YG Sbjct: 382 DFRFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYG 441 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R ++A++E +HD GI+WP SV PF + LI+I R+ + +YA + D Sbjct: 442 IGISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEFNTK-FD 500 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V +DD E+ G +F ADL+G PL+++VG + S+ VE+K RLTG E++ +++++ Sbjct: 501 VLYDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVI 559 Query: 439 SHRFSNNR 446 ++++ N + Sbjct: 560 TNKYDNLK 567 >gi|302788105|ref|XP_002975822.1| hypothetical protein SELMODRAFT_267898 [Selaginella moellendorffii] gi|300156823|gb|EFJ23451.1| hypothetical protein SELMODRAFT_267898 [Selaginella moellendorffii] Length = 420 Score = 216 bits (549), Expect = 7e-54, Method: Composition-based stats. Identities = 76/444 (17%), Positives = 150/444 (33%), Gaps = 46/444 (10%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQN 62 K + +E R D L + + I + G+ W P G + ++ Sbjct: 17 KAYQTQKEEAKRRDHRRLGQDLEIFS--IQEDAGGGLVFWHPKGALIRHLIEDYWKKVHL 74 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 R G + P + A+LW SG D Y + M ++ P + I++ + Sbjct: 75 RRGYELLYTPHIAKAELWKRSGHLDFYKENMFEQIKIEEEFYQLRPMNCPFHIQIYKDRV 134 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 +SYR LP F ++ +R EL DA+ F L + + Sbjct: 135 RSYRELPIKFAELGTVYRYELSG-----ALHGLFRDDAHIFCLPEQIRGE-IKSVLDLTE 188 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 I + G ++ + + P + S D + D Sbjct: 189 EILSQFGFQNYEINLSTKP-----------------EKAVGSDDIWHKATEALKDAISDK 231 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I E A Y D+ K+ D++ + S ++ F ++ T+ Sbjct: 232 GWTYGIDEGGGAFYGPKIDL---KIEDAIGRKWQCSTIQVD----FNLPERFD----LTY 280 Query: 303 KGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + + + G++ ++ + +P +AP + L+ + + Sbjct: 281 VDPSQARKQPIMIHRAIFGSIERFVGILI---ESYAGDFPLWIAPVQARLLPVTDTE--- 334 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 C+++ ARL + GE++ A++ PL +VG K V + ++ R Sbjct: 335 LPYCKQVLARLREKDIRAEI-ACGERLSKLIRNAEVQKIPLMAVVGPKEVEAQTLTVRTR 393 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 G +S++EVI+ + Sbjct: 394 HGGELGTLSVDEVIDRIETAVATR 417 >gi|153950997|ref|YP_001397450.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97] gi|166223330|sp|A7H1S0|SYT_CAMJD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|152938443|gb|ABS43184.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97] Length = 602 Score = 216 bits (549), Expect = 7e-54, Method: Composition-based stats. Identities = 71/444 (15%), Positives = 151/444 (34%), Gaps = 40/444 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y I + RD +L L T + G+ WL G + + ++ + Sbjct: 194 LKEYLAIIEEAKKRDHRKLGIELKLFT-FNDEIGGGLPIWLGNGARLRSKLEHMLYKIHR 252 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P L AD W SG Y +Y + M +++ P + +++S + Sbjct: 253 LRGYEPVRGPELLKADAWKISGHYANYKENM-YFTQIDEQEYGIKPMNCVGHIKVYQSDV 311 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP F++ + R E G+ R REF DA+ F + P K ++ Sbjct: 312 RSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCM-PSQIKEQVLEILAFV 370 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + T + + + + D+ Sbjct: 371 DNLMKLFDFSYEMEI------------------STKPEKAIGDDEIWEVATKALKEALDE 412 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ K+ D+L + ++ F +++ Sbjct: 413 QGLKYGIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVD----FNLPSRF----KLE 461 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +D + + +G+ ++ + + + I + Sbjct: 462 YTDSDNEKKQPVMLHRAILGSFERFIGILTEHC------AGEFPFFIAPTAVGIVPIGEA 515 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ++I L ++ D + E + + +A+ P+ +++G V+ V ++ Sbjct: 516 HIAYAKEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRD 575 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R ++++SL+E I + S Sbjct: 576 RRAKEQKNLSLDEFIKLVKEKMSE 599 >gi|227497547|ref|ZP_03927775.1| proline--tRNA ligase [Actinomyces urogenitalis DSM 15434] gi|226833001|gb|EEH65384.1| proline--tRNA ligase [Actinomyces urogenitalis DSM 15434] Length = 614 Score = 216 bits (549), Expect = 8e-54, Method: Composition-based stats. Identities = 101/248 (40%), Positives = 145/248 (58%), Gaps = 2/248 (0%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S F+ L+E+P DAE+ASHKL++R I + + GIY+WLPLG + + AI+REE N Sbjct: 5 LSTAFIRTLREDPADAEVASHKLLVRASYIRRTAPGIYTWLPLGLAVVRKIEAIVREEMN 64 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 R G E+ P L A+ + + R+D YG + L DR + PTHEE+ T + + Sbjct: 65 RMGGQEVHFPALLPAEPYKATQRWDEYGPTLFTLQDRKGGDYLLAPTHEEMFTLLAKDMF 124 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP T YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G SY + +Y Sbjct: 125 SSYKDLPATLYQIQTKYRDEARPRAGLIRGREFIMKDSYSFDVDDAGLDASYQRHRDAYE 184 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RIF RLGL+ +P+ A +G +GG S EF+ + GE S + +E Sbjct: 185 RIFRRLGLEYVPVNAMAGAMGGSHSEEFLHPSPIGEDTFVRSDGG--YAANAEAVTTPVP 242 Query: 243 ISLNSIVE 250 S+++ E Sbjct: 243 PSVDASAE 250 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 61/176 (34%), Positives = 89/176 (50%), Gaps = 4/176 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ RGIEVGHIF G KY+ + T +GK V MG Sbjct: 415 GTIEAAEVREGDLAPDGSGPLHLERGIEVGHIFALGRKYAQALGFTVLDENGKARVVTMG 474 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG RV+AA+ E++HD +G+ WP VAP+ + ++ D+ + L Sbjct: 475 SYGIGVSRVMAALAEANHDERGLAWPIQVAPYHVQVLATG-KDEQVFATAHALARELDAA 533 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 G +V +DD G +FA ++LLG P V+VG + VEI+ R +G R + Sbjct: 534 GLEVLYDDRRKVSAGVKFADSELLGVPFTVVVGRDLAKEGTVEIRDRRSGERRSVP 589 >gi|315444957|ref|YP_004077836.1| prolyl-tRNA synthetase, family II [Mycobacterium sp. Spyr1] gi|315263260|gb|ADU00002.1| prolyl-tRNA synthetase, family II [Mycobacterium sp. Spyr1] Length = 584 Score = 216 bits (549), Expect = 8e-54, Method: Composition-based stats. Identities = 99/249 (39%), Positives = 145/249 (58%), Gaps = 1/249 (0%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+ FL L+++P DAE+ SHKL++R G + G+YSWLPLG K L + I+R E + Sbjct: 1 MSELFLRTLRDDPADAEVPSHKLLIRAGYVRPVGPGLYSWLPLGLKVLRKIEHIVRSEMD 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P L + + R+ YG + RL DR D + GPTHEE+ T + Sbjct: 61 AIGGQEILFPALLPRAPYETTNRWTEYGDTLFRLQDRRDNDYLLGPTHEEMFTLTVKGEY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++ P YQIQ K+RDE RPR G++R REFLMKD+YSFD+ +G K++Y+ +Y Sbjct: 121 SSYKDFPLRLYQIQNKYRDEARPRAGILRGREFLMKDSYSFDVDDDGLKNAYHAHREAYQ 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGET-QVFCSKDFMDFPIPSENTDFDD 241 RIF RL ++ + + A SG +GG S EF+ ++ GE V C++ + + T D Sbjct: 181 RIFDRLKVRYVIVSAVSGAMGGSASEEFLAESEVGEDTFVRCAQSGYAANVEAVVTTAPD 240 Query: 242 IISLNSIVE 250 I L+ + E Sbjct: 241 PIPLDGLPE 249 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 64/176 (36%), Positives = 94/176 (53%), Gaps = 4/176 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ V+ARGIE+GH+F G KY+ +A G +GK + MG Sbjct: 395 GTIEAAEVREGDPSPDGAGPLVAARGIEIGHVFQLGRKYADAFNADVLGENGKPVRLTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VA + E HD G+ WP SVAPF + + I D R ++ L + Sbjct: 455 SYGIGVSRLVAVIAEQHHDELGLRWPGSVAPFAVH-VVIANKDAEARAGATELATALDRA 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 G DV DD G +F A+LLG P V+VG + +D VE++ R +G + ++ + Sbjct: 514 GADVLLDDRTASPGVKFKDAELLGVPWIVVVG-RGWADGVVELRDRFSGEKREIPV 568 >gi|227495079|ref|ZP_03925395.1| proline--tRNA ligase [Actinomyces coleocanis DSM 15436] gi|226831531|gb|EEH63914.1| proline--tRNA ligase [Actinomyces coleocanis DSM 15436] Length = 603 Score = 216 bits (549), Expect = 8e-54, Method: Composition-based stats. Identities = 103/271 (38%), Positives = 151/271 (55%), Gaps = 6/271 (2%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S +F+ L+E+P DAE+ SHKL++R G I + + GIY+WLPLG + L + ++REE + Sbjct: 5 MSSFFVRTLREDPADAEVTSHKLLVRAGYIRRTAPGIYTWLPLGLQVLKRIEKVVREEMD 64 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+ P L A+ + ++ R++ YG + +L DR + PTHEE+ T + + Sbjct: 65 AVGAQEVHFPALLPAEPYQKTNRWEEYGPTLFKLRDRKAADYLLAPTHEEMFTLLVKDMY 124 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSFD+ EG SY+ +Y Sbjct: 125 SSYKDLPVTLYQIQTKYRDEARPRAGLIRGREFVMKDAYSFDIDQEGLNTSYDLQRQAYQ 184 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RIF RLGL+ + A SG +GG S EF+ + GE S + T Sbjct: 185 RIFERLGLEYVICSAMSGAMGGSRSEEFLHPCEIGEDTFVRSPGGYAANAEAVTTPVPA- 243 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 V+ P + + K ++L E Sbjct: 244 -----PVDATNVPAFSVHETPGAKTMEALVE 269 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 93/193 (48%), Gaps = 5/193 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ ARGIE+GHIF G KY+ + +GK V MG Sbjct: 410 GTIEAAEIREGDPAPDGSGPLELARGIEIGHIFQLGKKYAEALDLKVLDQNGKTQVVTMG 469 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G RV+AA+ ES +D G+ WP +APF + ++ + + I +S Sbjct: 470 SYGVGVSRVLAALAESCNDENGLAWPMILAPFHLQVLATGKG-EELFETAGSIAKAVSDA 528 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV +DD G +FA A+LLG P ++VG + + D VE++ R G ++ + E Sbjct: 529 GFDVLYDDRPKVSAGVKFADAELLGMPYVLVVG-RGLKDGVVELRDRRNGTAVELPVAEA 587 Query: 435 INYASHRFSNNRP 447 NR Sbjct: 588 SAEILRVLEENRE 600 >gi|172040605|ref|YP_001800319.1| threonyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109] gi|171851909|emb|CAQ04885.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 662 Score = 216 bits (549), Expect = 8e-54, Method: Composition-based stats. Identities = 65/455 (14%), Positives = 134/455 (29%), Gaps = 50/455 (10%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + +L+E RD +L L + + G + P G + R +G Sbjct: 229 YQHMLEEAEKRDHRRLGAELDLFS-FPDEVGSGFPVFHPNGGIVRLEMEEHSRRRHLASG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEV 113 ++ P + DL+ +SG D Y + M + + P + + Sbjct: 288 YSFVNTPHITKGDLFQKSGHLDFYAEGMFPPMQLDGETDEEGNVTKPGQDYYAKPMNCPM 347 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKH 172 IF S +SYR LP ++ +R E G+ R+R F DA+ + T + + Sbjct: 348 HNLIFASRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYC-TEDQLED 406 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 + + + GL + + + + + + Sbjct: 407 ELTTVLEFIISLLRDYGLDDFYLELST----------------KDPKKFVGTDEIWERST 450 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + A Y + + D++ ++S ++ F Sbjct: 451 EILQRVAEKSGLELVPDPAGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FNLPE 503 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 ++ + DG + G++ V+ + G W I + Sbjct: 504 RFD----LEYTAPDGTKKRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVMGIPV 559 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + + E+ A L K G D +++ + P ++VG + V Sbjct: 560 A------EDFTEYLEEFVADLRKDGIRAEVDTSDDRMQKKIRTHTKGKIPFMLLVGGRDV 613 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 + V + + EE R Sbjct: 614 ENGAVSFRFHDGTQVNGVPREEAAKAIKEWIGQRR 648 >gi|251777990|ref|ZP_04820910.1| threonine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082305|gb|EES48195.1| threonine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 643 Score = 216 bits (549), Expect = 8e-54, Method: Composition-based stats. Identities = 81/445 (18%), Positives = 153/445 (34%), Gaps = 35/445 (7%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L T +G+ +P G K + + I +E+ R Sbjct: 228 EYLEAVEEAKKRDHNKLGRELKLFTT-DENVGQGLPLLMPKGAKIVQTLQRWIEDEEERR 286 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA--MIYGPTHEEVMTDIFRSHI 122 G + P + +DL+ SG +D Y M L D P I+ + Sbjct: 287 GYVLTKTPLMAKSDLYKISGHWDHYKDGMFVLGDEEKDEEVFALRPMTCPFQYTIYNAEQ 346 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+LP + + FR+E G++R R+F +TPE + + + Sbjct: 347 HSYRDLPIRYGETSTLFRNESSGEMHGLIRVRQFT-LADGHLIVTPEQLEEEFKGVLELI 405 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I LG I D+S+ F + D + + T D Sbjct: 406 KYIMKTLG------------IDEDISYRFSKWDPNNTEKYINDPDAWNKTQDTMRTILDH 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + A Y D+ + + + + I+ + + Sbjct: 454 LKIDYVEADDEAAFYGPKLDLQFKNVH---GKEDTIITLQIDFAL--------AERFDMS 502 Query: 302 FKGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +G+ + IG A++ + +P ++P ++ ++ I Sbjct: 503 YIDKNGEKKRPYIIHRSSIGCYERTLAMLI---EKYAGAFPTWLSPVQVKVLPISDK--- 556 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D E + L G + D E+IG + A L P ++VG K ++S+V ++ Sbjct: 557 YNDYAESVVKSLRNKGVRIEADYRAEKIGYKIREARLERTPYILVVGEKEAANSEVSVRS 616 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R M L+ + + Sbjct: 617 RKNDDEGAMKLDIFTERLLNEIATK 641 >gi|58263294|ref|XP_569057.1| threonine-tRNA ligase [Cryptococcus neoformans var. neoformans JEC21] gi|134108684|ref|XP_776995.1| hypothetical protein CNBB5220 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259678|gb|EAL22348.1| hypothetical protein CNBB5220 [Cryptococcus neoformans var. neoformans B-3501A] gi|57223707|gb|AAW41750.1| threonine-tRNA ligase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 772 Score = 216 bits (549), Expect = 8e-54, Method: Composition-based stats. Identities = 76/452 (16%), Positives = 157/452 (34%), Gaps = 43/452 (9%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ K +L + RD L + + S G +LP+G + + + + I++E Sbjct: 350 MKEYKKYL--EEAAKRDHRKIGKDQELF--IFNDLSPGSAFFLPMGMRIYNTLMSFIKDE 405 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + +A+LW SG + +Y ++M +L +++ + P + IF + Sbjct: 406 YFKRGFSEVGSPNIFNANLWKTSGHWQNYAEDMFQLK-ADEEQLALKPMNCPGHCLIFDA 464 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SY+ LP F + + R+E G+ R R F+ DA+ F + Y F Sbjct: 465 RERSYKELPLRFAEFGVLHRNEASGALSGLTRVRRFVQDDAHIFCTPDQVEAELY-SAFE 523 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E A+ +V K Sbjct: 524 FLDAVYKPFGFTYKVGLSTRNPKKWMGDLELWNKAEGTLREVLEQK-------------- 569 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + E+ A Y D +L D+L + + ++ F +++L Sbjct: 570 --VPGNWHVNEEDAAFYGPKLDF---QLTDALKRSWQCGTIQLD----FNLPERFNLKYH 620 Query: 300 ATFKGADGKDH--YVQMGSYGIGAMRVVAAVIESSH-DGKGIIWPDSVAPFKISLINIKA 356 + + DG V + +G++ A+I S + Sbjct: 621 SPEQNPDGTQFARPVMIHRAILGSLERFIAIITESTGGKWPLWLSPRQVVVIPVAKPFT- 679 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + +K+ + G D + + A + ++VG + V Sbjct: 680 ------EYAQKVAKTFQEAGLYAEVDLTDNTLNKKIRNAQTAQWNFIMVVGQDELDAQAV 733 Query: 417 EIKHRLTGIR---EDMSLEEVINYASHRFSNN 445 I++R ++ E ++L + + Sbjct: 734 NIRNRDDEVQGREETVALSRAVEQIVKLKESK 765 >gi|254431853|ref|ZP_05045556.1| threonyl-tRNA synthetase [Cyanobium sp. PCC 7001] gi|197626306|gb|EDY38865.1| threonyl-tRNA synthetase [Cyanobium sp. PCC 7001] Length = 575 Score = 216 bits (549), Expect = 8e-54, Method: Composition-based stats. Identities = 69/429 (16%), Positives = 130/429 (30%), Gaps = 36/429 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + RD L L + + + G+ W P G + + RE G Sbjct: 161 RQEEARRRDHRRLGTDLDLFS-IEDEAGAGLVFWHPRGARMRLEIENFWREAHFAAGYEL 219 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 + P + LW SG D Y + M +++ P + + S ++SYR L Sbjct: 220 LYTPHVADIGLWKTSGHLDFYSESMFGPMQVDEREYQLKPMNCPFHVLTYASTLRSYREL 279 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P + ++ +R E G+MR R F DA+ F L + S + RI R Sbjct: 280 PIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDE-ILAILDLTERILSR 338 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 +S + + P D Sbjct: 339 FDFRSYEINLSTRPEKS-----------------IGEDAVWQLATQGLIEALDRKGWAYK 381 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 + E A Y D+ K+ D++ + S ++ F ++ L A Sbjct: 382 VDEGGGAFYGPKIDL---KIEDAIGRMWQCSTIQLD----FNLPERFDLHYVAA--DGSR 432 Query: 308 KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + + + R + E+ R E+ Sbjct: 433 QRPIMIHRAIFGSLERFFGIMTENYAGDFPFWLAPEQIRLLPVT-------DEVRPYAEE 485 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + +L G D G+++G + + P+ ++G+K V ++ R G Sbjct: 486 LLGQLKGAGVRASVDHSGDRLGKLIRNGEQMKIPVLGVIGAKEAETGSVSLRSRRDGDLG 545 Query: 428 DMSLEEVIN 436 ++ ++ Sbjct: 546 CVAASTLLE 554 >gi|33866012|ref|NP_897571.1| threonyl-tRNA synthetase [Synechococcus sp. WH 8102] gi|73919836|sp|Q7U662|SYT_SYNPX RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|33638987|emb|CAE07993.1| threonyl-tRNA synthetase [Synechococcus sp. WH 8102] Length = 611 Score = 216 bits (549), Expect = 8e-54, Method: Composition-based stats. Identities = 67/426 (15%), Positives = 134/426 (31%), Gaps = 36/426 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD L L + + + G+ W P G + + R+ G + Sbjct: 203 EEALRRDHRRIGKDLDLFS-IEDEAGAGLVFWHPRGARMRLLIEEFWRQAHFEGGYELLY 261 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + LW SG D Y + M + +++ P + + S ++SYR LP Sbjct: 262 TPHVADISLWKTSGHLDFYAESMFGPMEVDEREYQLKPMNCPFHVLTYASKLRSYRELPI 321 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + ++ +R E G+MR R F DA+ F L + S K+ RI Sbjct: 322 RWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDE-ILKILDLTERILSTFD 380 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + + P D + I Sbjct: 381 FNTYEINLSTRPEKS-----------------IGDDAVWDLATKGLIEALERKGWKYKID 423 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 E A Y D+ K+ D++ + S ++ F ++ L A + Sbjct: 424 EGGGAFYGPKIDL---KIEDAIGRMWQCSTIQLD----FNLPERFKLDYVAA--DGSKQR 474 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + + R + E+ + E + Sbjct: 475 PIMIHRAIFGSLERFFGIMTENYAGDYPFWLAPEQVRLLPVT-------DEVQPYAESLL 527 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +L++ G D G+++G + + P+ ++G+K + V ++ R G Sbjct: 528 DQLTQAGVRATIDRSGDRLGKLIRTGEQMKIPVLAVIGAKEAEQNAVSLRSRRDGDLGVA 587 Query: 430 SLEEVI 435 ++ +++ Sbjct: 588 AVADLL 593 >gi|189183871|ref|YP_001937656.1| threonyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda] gi|238692247|sp|B3CSS5|SYT_ORITI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189180642|dbj|BAG40422.1| threonyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda] Length = 648 Score = 216 bits (549), Expect = 8e-54, Method: Composition-based stats. Identities = 72/451 (15%), Positives = 147/451 (32%), Gaps = 53/451 (11%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L ++G+ W G + I + R G Sbjct: 232 YLHRLSEAQKRDHRKLGRELELF--HFQDEAQGMPFWHSKGWTIFKIIKDYISCQIQRAG 289 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADR--------------NDKAMIYGPTHE 111 IE++ P + + LW +SG ++ + + M L A+ P + Sbjct: 290 YIEVNTPMVLNQKLWEKSGHWEKFRENMFTLDTNAAEQDHNLIKDSIETKCALALKPMNC 349 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 IF IKSYR+LP + R E +G+MR R F+ DA+ F + + Sbjct: 350 PGHIQIFNYTIKSYRDLPLRMAEFGSCHRYEPSGALYGLMRVRSFVQDDAHIFCTEDQIT 409 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + +++ G + ++ P + D Sbjct: 410 DETIKFCH-LLKQVYQDFGFPEVKIKFSDRPEKR-----------------AGTDKIWDK 451 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + +I A Y + L D++ + ++ F Sbjct: 452 AEQALIHAIQTLGEEYTINRGEGAFYGPKLEFI---LTDAIGREWQCGTLQVD----FVL 504 Query: 291 GTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 + ++A++ ++G + +G+ ++ + GK IW I Sbjct: 505 PER----LNASYISSEGSKKRPVILHRAILGSFERFIGILIEHYSGKLPIWLA-----PI 555 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 + + D+ ++++ L D ++I + PL I+G K Sbjct: 556 QVAVVSITDEAVN-YAKQLHQELIDNNIRSTLDISNQKINYKIRNFFTAKVPLIAILGKK 614 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 K+ I+ + + +S E+I + Sbjct: 615 ESESGKIAIRTLGSQEQHVISSSELIAHIRK 645 >gi|302332869|gb|ADL23062.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JKD6159] Length = 567 Score = 216 bits (549), Expect = 8e-54, Method: Composition-based stats. Identities = 111/237 (46%), Positives = 163/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK D+ E Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSK-ESDYAANIEKA 236 Score = 157 bits (397), Expect = 4e-36, Method: Composition-based stats. Identities = 70/188 (37%), Positives = 114/188 (60%), Gaps = 4/188 (2%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D + L + V+ GIEVG +F GTKYS M+ATF GK + MG YG Sbjct: 382 DFRFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYG 441 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R ++A++E +HD GI+WP SV+PF + LI+I R+ +++YA+ ++ D Sbjct: 442 IGISRTLSAIVEQNHDDNGIVWPKSVSPFDVHLISINPKKDDQRELADQLYAKFNEK-FD 500 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V +DD E+ G +F ADL+G PL+++VG + S+ VE+K RLTG E++ +++++ Sbjct: 501 VLYDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVI 559 Query: 439 SHRFSNNR 446 ++++ N + Sbjct: 560 TNKYDNLK 567 >gi|227514714|ref|ZP_03944763.1| proline--tRNA ligase [Lactobacillus fermentum ATCC 14931] gi|227086918|gb|EEI22230.1| proline--tRNA ligase [Lactobacillus fermentum ATCC 14931] Length = 581 Score = 216 bits (549), Expect = 8e-54, Method: Composition-based stats. Identities = 102/250 (40%), Positives = 147/250 (58%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P +E P DAE+ SHK+M+R G I+Q S G++++LPL + + + IIREE Sbjct: 9 MKQSQMLIPTQKEAPADAEVLSHKMMVRAGYIYQVSAGVWAYLPLAYRVIRKIEQIIREE 68 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM +P L ADLW ESGRY++YG + +L DR ++ I GPTHEE +T I R Sbjct: 69 MDKAGAVEMLLPGLLPADLWKESGRYEAYGDNLFKLKDRRERDFILGPTHEETVTSILRD 128 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQ+Q K+RDE RPR+G++R +EF M D YSF G +Y+ + Sbjct: 129 AIHSYKKLPLVVYQLQDKYRDEDRPRYGILRGKEFEMLDGYSFSADQAGLDQAYDLQAKA 188 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R+GL + A+SG +GG S EF A GE + + + T F Sbjct: 189 YRNIFDRIGLDYKVILADSGTMGGKNSQEFSAPAAIGEDVIAYTDGDYAANLEKATTKFT 248 Query: 241 DIISLNSIVE 250 + E Sbjct: 249 PTKQIGEEAE 258 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 67/184 (36%), Positives = 99/184 (53%), Gaps = 2/184 (1%) Query: 261 DVHNEKLFDSLPEN-KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 D + ++ P+ GIE+GHIF GT YS AT +G+D + MG YGI Sbjct: 395 DFRTVQEGETAPDGLPIKFTNGIEIGHIFKLGTHYSEVFGATVLDQNGRDVPMIMGCYGI 454 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G R+++A+ E + D G++WP +VAPF I +I + A + E+I A L + G +V Sbjct: 455 GVSRLLSAISEQNADENGLVWPQAVAPFDIHVIPVNAKKEDQMAMAEEITANLEEAGYEV 514 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 DD E+ G +FA ADL+G P++V VG K + VEIK R TG ++ EE+ + Sbjct: 515 LVDDRKERAGVKFADADLIGVPIRVTVGKK-AGEGIVEIKIRKTGETLEVHKEELATNIA 573 Query: 440 HRFS 443 Sbjct: 574 ILLK 577 >gi|254392125|ref|ZP_05007314.1| prolyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|294815425|ref|ZP_06774068.1| Prolyl-tRNA synthetase 1 [Streptomyces clavuligerus ATCC 27064] gi|326443777|ref|ZP_08218511.1| prolyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|197705801|gb|EDY51613.1| prolyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|294328024|gb|EFG09667.1| Prolyl-tRNA synthetase 1 [Streptomyces clavuligerus ATCC 27064] Length = 566 Score = 216 bits (549), Expect = 8e-54, Method: Composition-based stats. Identities = 110/269 (40%), Positives = 154/269 (57%), Gaps = 4/269 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE SHKL++R G + +++ GI+SWLPLG+K L+NV ++REE Sbjct: 7 RMSRLMVKTLRDDPADAETLSHKLLVRAGYVRRNAAGIWSWLPLGKKVLENVTRVVREEM 66 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + +GR+D YG E+ RL DR + GPTHEE+ T + + Sbjct: 67 DAIGAQEVLLPALLPKEPYEITGRWDEYGAELFRLKDRKGAEYLLGPTHEEIFTQLVKDQ 126 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF MKD+YSFD T EG SY +Y Sbjct: 127 CSSYKDLPVILYQIQTKYRDEARPRSGILRGREFQMKDSYSFDTTDEGLAESYALHREAY 186 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +RIF RLGL + A SG +GG S EF+ A GE F D+ +E + Sbjct: 187 IRIFRRLGLDHRIVSAVSGAMGGSASEEFLAPAAAGE-DTFVHCPSCDYAANTEAVTYVA 245 Query: 242 IISL---NSIVEQWTAPYAATSDVHNEKL 267 + VE P T + E L Sbjct: 246 AAPEAVDHPAVELLDTPDTPTIETLAEHL 274 Score = 137 bits (346), Expect = 3e-30, Method: Composition-based stats. Identities = 57/173 (32%), Positives = 84/173 (48%), Gaps = 6/173 (3%) Query: 270 SLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 P+ R IE+GHIF G KY+ G +GK V MGSYGIG R VAA Sbjct: 395 PCPKCGTGLKLDRAIEIGHIFQLGRKYADAFQLDVLGQNGKPTRVTMGSYGIGVSRAVAA 454 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GE 386 + E + D KG+ WP +AP + + A V + ++ +L+ G V D+ G Sbjct: 455 LAEQTADEKGLCWPAEIAPADVH--VVAAGKAVQIELALEVADQLAAAGLRVLVDERPGV 512 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 G +F A+L+G P ++ G + VE+K R TG RE++ + E + Sbjct: 513 SPGVKFTDAELIGVPTILVAGRRSAE-GVVELKDRRTGEREELPVAEAVARLR 564 >gi|291242165|ref|XP_002740982.1| PREDICTED: prolyl-tRNA synthetase (mitochondrial)(putative)-like [Saccoglossus kowalevskii] Length = 443 Score = 215 bits (548), Expect = 9e-54, Method: Composition-based stats. Identities = 129/415 (31%), Positives = 204/415 (49%), Gaps = 46/415 (11%) Query: 21 ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW 80 S +LM+ G+I Q S G+Y LPL ++L+ + +I EE + G ++S+P + +++LW Sbjct: 47 KSQRLMMEHGLIRQSSPGVYHLLPLALRSLEKLIRLIDEEMHSIGGTKISMPCMTTSELW 106 Query: 81 VESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMT-DIFRSHIKSYRNLPFTFYQIQLKF 139 + R+++ G E+ ++ DR+ GPTHEE +T I S++ LP YQI KF Sbjct: 107 KATNRWETNGPELFKVEDRHGIQYCLGPTHEEAVTDLIASQGRLSHKQLPLRIYQITRKF 166 Query: 140 RDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAES 199 RDE RPRFG++R REF MKD Y+FD E + +Y + +Y A++ Sbjct: 167 RDEKRPRFGLLRGREFYMKDMYTFDANTENAIKTYEAVNQAYFS-------------ADT 213 Query: 200 GPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAAT 259 G IGG +SHE+ + ADTGE +++ + A Sbjct: 214 GSIGGSMSHEYHLPADTGEDELWFCNRC-----------------------GFGAN-KEL 249 Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 D+ E N S +GIEVGH FY GTKYS +A + ++ + +MG YG+ Sbjct: 250 GDIDIEHCSHCGTTNSLESRQGIEVGHAFYLGTKYSKVFNADYSDSNNQTRTTEMGCYGL 309 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA--HDQVCRDACEKIYAR----LS 373 G R++AA IE S I WP +AP++I +I K + + +Y + L Sbjct: 310 GVTRILAAAIEVSSTDNEIRWPHLLAPYQIYIIPSKDGSKEAGAQPIAVGLYDQIVSHLP 369 Query: 374 KVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVS-DSKVEIKHRLTGIR 426 + ++ DD IG + A LG+P +++G K + + E+ + TG Sbjct: 370 HLKHEIILDDRNHMTIGKRMKEAKSLGYPFVIVIGKKALQPEPLFELCNVNTGET 424 >gi|262202217|ref|YP_003273425.1| threonyl-tRNA synthetase [Gordonia bronchialis DSM 43247] gi|262085564|gb|ACY21532.1| threonyl-tRNA synthetase [Gordonia bronchialis DSM 43247] Length = 691 Score = 215 bits (548), Expect = 9e-54, Method: Composition-based stats. Identities = 68/454 (14%), Positives = 131/454 (28%), Gaps = 48/454 (10%) Query: 7 FLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L + RD +L L + + G+ + P G + R + G Sbjct: 251 YLEMLAEAEKRDHRKLGSELDLFS-FPDEIGSGLPVFHPKGGVIRKELEDYSRLRHAQAG 309 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEV 113 + P DL+ SG D Y M R P + + Sbjct: 310 YEFVYTPHATKGDLFSLSGHLDWYADGMYPPMQLDEEVDADGTVRRPAIDYYLKPMNCPM 369 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKH 172 IFRS +SYR LP ++ +R E G+ R+R F DA+ + + + Sbjct: 370 HNLIFRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQMGEE 429 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 + L + GL + + S + + Sbjct: 430 -VRSLLQFVLDLLRDYGLDDFYLELSTRNPDKS----------------IGSDEAWEEAT 472 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 A YA + + D++ ++S +++ F Sbjct: 473 EVLRAAATSFGLDLVDDPGGAAFYAPKI---SVQARDAIGRTWQMSTIQVDMMLPDRFEL 529 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 +Y+ A V + G++ V+ + G W V I + Sbjct: 530 EYTGTDGAK-------HRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLSPVQVVGIPVA 582 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 D + + L G D +++ + P ++ G + V Sbjct: 583 ------DAFADHLQGVVDTLRAAGLRAEVDHSDDRMQKKIRNHTTGKVPFMLLAGERDVE 636 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 V + R + + E + + ++ R Sbjct: 637 AGAVSFRFRDGTQVNGVPVAEAVGIITDWVTSRR 670 >gi|253731882|ref|ZP_04866047.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253724292|gb|EES93021.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 567 Score = 215 bits (548), Expect = 9e-54, Method: Composition-based stats. Identities = 111/237 (46%), Positives = 163/237 (68%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +++ P +AE SH+L+L++G+I Q + GIYS+LPL + L+N+ AI+R+E Sbjct: 1 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R ++E+ +P LQ A+LW ESGR+ +YG E++RL DR+ + GPTHEE++T I R+ Sbjct: 61 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRRFALGPTHEELVTSIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T +QIQ KFRDE RPRFG++R REF+MKDAYSF +Y M+ + Sbjct: 121 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y RIF R+G+ + P+ A+SG IGG +HEF+ L+ GE + SK D+ E Sbjct: 181 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSK-ESDYAANIEKA 236 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 70/188 (37%), Positives = 110/188 (58%), Gaps = 4/188 (2%) Query: 261 DVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D + L + V+ GIEVG +F GTKYS M+ATF GK + MG YG Sbjct: 382 DFRFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYG 441 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R ++A++E +HD GI+WP SV PF + LI+I R+ + +YA + D Sbjct: 442 IGISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEFNTK-FD 500 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V +DD E+ G +F ADL+G PL+++VG + S+ VE+K RLTG E++ +++++ Sbjct: 501 VLYDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVI 559 Query: 439 SHRFSNNR 446 ++++ N + Sbjct: 560 TNKYDNLK 567 >gi|73951033|ref|XP_857231.1| PREDICTED: similar to threonyl-tRNA synthetase-like 2 isoform 4 [Canis familiaris] Length = 798 Score = 215 bits (548), Expect = 9e-54, Method: Composition-based stats. Identities = 75/448 (16%), Positives = 154/448 (34%), Gaps = 43/448 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD + L H S G +LP G + + IREE Sbjct: 382 KMMKTWEKFQEEAKNRDHRKVGKEQELF--FFHDLSPGSCFFLPRGAFIYNTLMDFIREE 439 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R E+ P + ++ LW SG + Y + M D P + +F Sbjct: 440 YHRRNFTEVLSPNMFNSKLWETSGHWQHYSENMFTF-DIEKDTFALKPMNCPGHCLMFAH 498 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R +P + R+EL G+ R R F DA+ F + + Sbjct: 499 RPRSWREMPVRLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQ-IEEEIKGCLQ 557 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G F + T + D Sbjct: 558 FLQSVYSTFGFS------------------FQLNLSTRPENFLGEVELWDEAEKQLQNSL 599 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + A Y D+ K+ D++ + + ++ F ++ + Sbjct: 600 VEFGKPWKMNPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRF----N 648 Query: 300 ATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 T++ GK + V + +G++ + A++ + G WP ++P ++ +I + Sbjct: 649 LTYRSRSGKIRNPVIIHRAILGSVERMIAILS---ENYGGKWPFWLSPRQVMVIPVGP-- 703 Query: 359 QVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 C ++ + + G D D + + A L + ++VG K +++ V Sbjct: 704 -TCEKYALQVSSAFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKTNNAVN 762 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ R I ++S+ I+ + + Sbjct: 763 VRTRDNKIHGEISVTSAIHKLKNLKKSR 790 >gi|240172755|ref|ZP_04751414.1| prolyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478] Length = 582 Score = 215 bits (548), Expect = 9e-54, Method: Composition-based stats. Identities = 97/268 (36%), Positives = 145/268 (54%), Gaps = 1/268 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ SHKL++R G + + G+YSWLPLG + L N+ ++REE Sbjct: 4 RMSQLFLRTLRDDPADAEVPSHKLLIRAGYVRPIAPGLYSWLPLGLRVLRNIERVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 64 NAIGGQEILFPALLPRAPYETTNRWTEYGDSVFRLQDRRGNDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G K +Y+ +Y Sbjct: 124 YNSYKDFPLVLYQIQNKYRDEARPRAGILRVREFVMKDSYSFDIDSAGLKAAYHAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGET-QVFCSKDFMDFPIPSENTDFD 240 RIF RL ++ + + A SG +GG S EF+ + GE V C + + + T Sbjct: 184 QRIFERLRVRYVIVSAVSGAMGGSASEEFLAESPVGEDTFVRCPESGYAANVEAVITARP 243 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLF 268 + ++ E T + + Sbjct: 244 ETRPIDGQPEAVVHDTGDTPTIATLVEW 271 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 66/175 (37%), Positives = 92/175 (52%), Gaps = 4/175 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ V ARGIE+GHIF G KY+ SA G DGK + MG Sbjct: 395 GTIEAAEVREGDPSPDGAGSLVMARGIEIGHIFQLGQKYTDAFSADVLGEDGKPVRLTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VA V E HD G+ WP ++APF + L I D R + L++ Sbjct: 455 SYGIGVSRLVAVVAEQHHDELGLRWPPAIAPFDVHL-VIANKDAEARTGAVALATELNQQ 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 G +V DD G +F A+LLG P V+VG + +D VE++ R +G +++ Sbjct: 514 GVEVLLDDRQASPGVKFKDAELLGMPWIVVVG-RGWADGVVELRDRFSGQTRELA 567 >gi|239982632|ref|ZP_04705156.1| prolyl-tRNA synthetase [Streptomyces albus J1074] gi|291454473|ref|ZP_06593863.1| prolyl-tRNA synthetase 1 [Streptomyces albus J1074] gi|291357422|gb|EFE84324.1| prolyl-tRNA synthetase 1 [Streptomyces albus J1074] Length = 564 Score = 215 bits (548), Expect = 9e-54, Method: Composition-based stats. Identities = 106/262 (40%), Positives = 148/262 (56%), Gaps = 2/262 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE SHKL++R G + + + GI+SWLPLG+K LDN++ I+REE Sbjct: 6 RMSRLMVKTLRDDPADAETISHKLLVRAGYVRRTAAGIWSWLPLGKKVLDNISHIVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + SGR++ YG + RL DR + GPTHEE+ T + + Sbjct: 66 DAIGAQEVLLPALLPKEPYEASGRWEEYGDLLFRLKDRKGADYLLGPTHEEIFTQVVKDQ 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR GV+R REF MKD+YSFD T EG + SY +Y Sbjct: 126 CTSYKDLPVMLYQIQTKYRDEARPRSGVLRGREFQMKDSYSFDTTDEGLEESYQLHRAAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD--F 239 +IF RLGL + A SG +GG S EF+ A GE + T Sbjct: 186 QKIFARLGLDYRIVSAVSGAMGGSASEEFLAPAPAGEDTFADCPNCSYAANTEAVTFALA 245 Query: 240 DDIISLNSIVEQWTAPYAATSD 261 + + VE P T + Sbjct: 246 PVEGAEHGPVEVLDTPDTPTIE 267 Score = 140 bits (352), Expect = 6e-31, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 88/177 (49%), Gaps = 6/177 (3%) Query: 266 KLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 + D P R IE+GHIF G KY+ G GK V MGSYGIG R Sbjct: 390 EEGDPCPNCGNGLKLDRAIEIGHIFQLGRKYADTFQLDVLGQQGKPVRVTMGSYGIGVSR 449 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 VAA+ E + DG+G+ WP VAP + + A + + ++ +L+ G V DD Sbjct: 450 AVAALAEQTADGQGLCWPAEVAPADVH--VVAAGKALQTELALEVSEKLNAAGVRVLVDD 507 Query: 384 M-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 G G +F A+L+G P ++ G + +D VE+K R TG RE++ + E + + Sbjct: 508 RAGVSPGVKFTDAELIGVPKILVAGRRS-ADGIVELKDRRTGEREELPVAEAVARLT 563 >gi|114559271|ref|XP_001168925.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 8 [Pan troglodytes] Length = 701 Score = 215 bits (548), Expect = 9e-54, Method: Composition-based stats. Identities = 86/441 (19%), Positives = 147/441 (33%), Gaps = 42/441 (9%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + RD + L H+ S G +LP G + + + A IR E G E+ Sbjct: 294 REEAELRDHRRIGKEQELF--FFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEV 351 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 PTL S LW +SG ++ Y ++M + D + P + +F +S+R LP Sbjct: 352 KTPTLFSTKLWEQSGHWEHYQEDMFAVQHITDT-LALKPMNCPAHCLMFAHRPRSWRELP 410 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 R E G+ R R F DA+ F T + ++ L Sbjct: 411 LRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAE-IQSCLDFLRSVYAVL 469 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 G + P G D + + Sbjct: 470 GFSFRLA-LSTRPSGF-----------------LGDPCLWDQAEQVLKQALKEFGEPWDL 511 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A Y DVH L D+L + ++ F ++ +KG G Sbjct: 512 NSGDGAFYGPKIDVH---LHDALGRPHQCGTIQLD----FQLPLRFD----LQYKGQAGA 560 Query: 309 -DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + V + +G++ + V+ + G WP ++PF++ +I + + + + ++ Sbjct: 561 LERPVLIHRAVLGSVERLLGVLA---ESCGGKWPLWLSPFQVVVIPVGSEQE---EYAKE 614 Query: 368 IYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 L G D D G + + A L + Q +VG K S V I+ R Sbjct: 615 AQQSLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIRTRDNRRL 674 Query: 427 EDMSLEEVINYASHRFSNNRP 447 + L E + + P Sbjct: 675 GEWDLPEAVQRLVELQNTRVP 695 >gi|327398599|ref|YP_004339468.1| Prolyl-tRNA synthetase [Hippea maritima DSM 10411] gi|327181228|gb|AEA33409.1| Prolyl-tRNA synthetase [Hippea maritima DSM 10411] Length = 578 Score = 215 bits (548), Expect = 1e-53, Method: Composition-based stats. Identities = 118/268 (44%), Positives = 165/268 (61%), Gaps = 1/268 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F+ L+E+ ++A I SH L+LR G I + + GIY++LPLG + + V+ I+REE Sbjct: 1 MRYSESFIYTLKEDQKEAAIVSHNLLLRGGFILKLASGIYNYLPLGLRVIRKVSDIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ + +Q A+LW ESGR++ YGKE+LR+ DR D+ ++GPTHEEV+TDI R Sbjct: 61 MNKAGAQEILMAAIQPAELWKESGRWNDYGKELLRIKDRGDRDFVFGPTHEEVVTDIVRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ +P YQIQ KFRDELRPRFG+MR REF+MKDAYSFD G SY KM ++ Sbjct: 121 FVKSYKQMPLNLYQIQTKFRDELRPRFGLMRGREFIMKDAYSFDKDEAGMDVSYEKMNIA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A++G IGG S EF+VL+ TGE ++ ++ E Sbjct: 181 YHNIFRRCGLAFRSVEADTGSIGGKDSEEFMVLSQTGEDEIVICDSC-EYASNVERATSI 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLF 268 +E + + F Sbjct: 240 VEDEPAQEIELKEVATPGKQTIKDVCEF 267 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 3/190 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK---RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 T+D+ K + P K RGIEVGHIF G KYS M+ATF +G+ Sbjct: 375 FECDTADLRVVKEGELCPRCKKGTLKKIRGIEVGHIFKLGQKYSKAMNATFLDENGRSVP 434 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 MG YGIG R A IE +HD GIIWP S+APF+I ++++ ++ + C+ +Y + Sbjct: 435 YYMGCYGIGIGRTAQAAIEQNHDEYGIIWPISIAPFEIEIVSLDTRNKELVEFCDILYEQ 494 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 + K G DV +DD E+ G + DL+G P++VIVG K +VE+ R ++ + Sbjct: 495 MKKEGFDVLYDDRDERAGIKLNDMDLIGIPIRVIVGKKAFEKGEVEVSLRRDRQKQSVEK 554 Query: 432 EEVINYASHR 441 +EV+ Sbjct: 555 DEVLEKVKEL 564 >gi|330800299|ref|XP_003288175.1| threonyl-tRNA synthetase [Dictyostelium purpureum] gi|325081805|gb|EGC35308.1| threonyl-tRNA synthetase [Dictyostelium purpureum] Length = 713 Score = 215 bits (548), Expect = 1e-53, Method: Composition-based stats. Identities = 78/438 (17%), Positives = 149/438 (34%), Gaps = 40/438 (9%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD L H S G +LP G + + + IR E + G E+ Sbjct: 312 MKEAALRDHRNIGRAQELF--FFHPFSPGSAFFLPHGTRIYNKLVDFIRAEYHNRGFSEV 369 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P++ S LW +SG + Y + M + + P + +F S +SYR LP Sbjct: 370 ISPSVFSQKLWEQSGHWAKYSENMF-NIPVDKETFSLKPMNCPGHCLMFGSRQRSYRELP 428 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 F + R+EL G+ R R+F DA+ F N ++ Sbjct: 429 LRFADFGVLHRNELAGALTGLTRVRKFQQDDAHIFCTVDMIENE-INSCLEFMQHVYGIF 487 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 G EF + T + S + + Sbjct: 488 G------------------FEFQLNLSTRPENFLGEISQWNEAEKSLEKALNRFGKPWQL 529 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A Y D+ +++D L + + ++ F ++ L + K Sbjct: 530 NPGDGAFYGPKIDI---QIYDCLKRAHQCATIQLD----FQLPIRFDLEYQSDDATDVKK 582 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + + R++A ++E + A + + K+ Sbjct: 583 RPVIIHRAILGSVERMMAILMEHTAGKWPFWVSPRQAIVVTVA-------KQHNEYGHKV 635 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 ++S++G D+ + IG + A L + ++VG + + ++KV ++ R +R Sbjct: 636 AKQISELGYYCDIDESDKTIGKKVREAQLAQYNYILVVGQEEIDNNKVNVRTRDNVVRGS 695 Query: 429 MSLEEVINY---ASHRFS 443 +S+EE++ S F Sbjct: 696 ISVEELVAEFAVLSKEFK 713 >gi|306785673|ref|ZP_07423995.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu003] gi|308329673|gb|EFP18524.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu003] Length = 582 Score = 215 bits (548), Expect = 1e-53, Method: Composition-based stats. Identities = 101/259 (38%), Positives = 149/259 (57%), Gaps = 1/259 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ASHKL++R G I + G+YSWLPLG + L N+ +IR+E Sbjct: 4 RMSELFLRTLRDDPADAEVASHKLLIRAGYIRPVAPGLYSWLPLGLRVLRNIERVIRDEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 64 NAIGGQEILFPALLPRAPYETTNRWTQYGDSVFRLKDRRGNDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R+REF+MKD+YSFD+ G K +Y+ +Y Sbjct: 124 YSSYKDFPLTLYQIQTKYRDEARPRAGILRAREFVMKDSYSFDIDAAGLKAAYHAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTDFD 240 RIF RL ++ + + A SG +GG S EF+ + +GE V C + + + T Sbjct: 184 QRIFDRLQVRYVIVSAVSGAMGGSASEEFLAESPSGEDAFVRCLESGYAANVEAVVTARP 243 Query: 241 DIISLNSIVEQWTAPYAAT 259 D + ++ + E T Sbjct: 244 DTLPIDGLPEAVVHDTGDT 262 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 67/174 (38%), Positives = 93/174 (53%), Gaps = 4/174 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ V ARGIE+GHIF G+KY+ +A G DGK + MG Sbjct: 395 GTIEAAEVREGDPSPDGAGPLVMARGIEIGHIFQLGSKYTDAFTADVLGEDGKPVRLTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VA V E HD G+ WP +VAPF + L I D R + A L ++ Sbjct: 455 SYGIGVSRLVAVVAEQHHDELGLRWPSTVAPFDVHL-VIANKDAQARAGATALAADLDRL 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 G +V DD G +F A+LLG P V+VG + +D VE++ R +G ++ Sbjct: 514 GVEVLLDDRQASAGVKFKDAELLGMPWIVVVG-RGWADGVVELRDRFSGQTREL 566 >gi|294790672|ref|ZP_06755830.1| proline--tRNA ligase [Scardovia inopinata F0304] gi|294458569|gb|EFG26922.1| proline--tRNA ligase [Scardovia inopinata F0304] Length = 598 Score = 215 bits (548), Expect = 1e-53, Method: Composition-based stats. Identities = 105/270 (38%), Positives = 153/270 (56%), Gaps = 6/270 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+++P DA++ S KL++R G I + G+YSWLPLG + L+ + AIIREE Sbjct: 7 RMSSLFLRTLRDDPADADVDSAKLLIRAGYIRKIGPGLYSWLPLGLRVLNKIEAIIREEI 66 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+ P + + + S R++ YG + R DR+ + PTHEE+ T + + Sbjct: 67 NAIGAQEVHFPAMMPREPYQMSNRWEEYGDNIFRFKDRHGADYLLAPTHEEMFTLMVKDM 126 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T YQIQ K+RDE RPR G++R R+F+MKDAYSFD+ EG K +Y + +Y Sbjct: 127 YTSYKDLPVTLYQIQGKYRDEFRPRAGMIRGRQFVMKDAYSFDIDEEGLKKAYLQERGAY 186 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIFHRL L + + A SGP+GG S EF+ GE + + + + T + Sbjct: 187 ERIFHRLDLNYVIVHAVSGPMGGSESEEFLAPMPIGEDTFALAPSGKAWNVEALTTPESE 246 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 ++ + P A D + DSL Sbjct: 247 ------PLDFSSIPAAQVKDTPDSTTIDSL 270 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 57/186 (30%), Positives = 94/186 (50%), Gaps = 4/186 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ RG+E+G +F G KYS M +G+ V MG Sbjct: 408 GTVEAAEVRHGDMSPDGSGPLSFERGVEIGQVFQLGLKYSHAMGLKVLNKNGQAVPVWMG 467 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG RV++ + E+ HD KG+IWP ++AP ++ L+ D + + +L Sbjct: 468 CYGIGVSRVMSCIAETHHDDKGLIWPAAIAPAQVHLVATG-KDDRAFHIADDLLHQLEGE 526 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD G +F ++LLG PL ++VG V++ VEI++R +G + + LE+ Sbjct: 527 GIEVLYDDRLKVSPGVKFKDSELLGMPLVLVVGRDAVNNGTVEIRNRRSGQVQIVPLEQA 586 Query: 435 INYASH 440 + Sbjct: 587 FHTVKE 592 >gi|260187861|ref|ZP_05765335.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A] gi|289448507|ref|ZP_06438251.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis CPHL_A] gi|289421465|gb|EFD18666.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis CPHL_A] Length = 582 Score = 215 bits (548), Expect = 1e-53, Method: Composition-based stats. Identities = 101/259 (38%), Positives = 149/259 (57%), Gaps = 1/259 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ASHKL++R G I + G+YSWLPLG + L N+ +IR+E Sbjct: 4 RMSELFLRTLRDDPADAEVASHKLLIRAGYIRPVAPGLYSWLPLGLRVLRNIERVIRDEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 64 NAIGGQEILFPALLPRAPYETTNRWTQYGDSVFRLKDRRGNDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R+REF+MKD+YSFD+ G K +Y+ +Y Sbjct: 124 YSSYKDFPLTLYQIQTKYRDEARPRAGILRAREFVMKDSYSFDIDAAGLKAAYHAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTDFD 240 RIF RL ++ + + A SG +GG S EF+ + +GE V C + + + T Sbjct: 184 QRIFDRLQVRYVIVSAVSGAMGGSASEEFLAESPSGEDAFVRCLESGYAANVEAVVTARP 243 Query: 241 DIISLNSIVEQWTAPYAAT 259 D + ++ + E T Sbjct: 244 DTLPIDGLPEAVVHDTGDT 262 Score = 127 bits (318), Expect = 5e-27, Method: Composition-based stats. Identities = 67/174 (38%), Positives = 93/174 (53%), Gaps = 4/174 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ V ARGIE+GHIF G+KY+ +A G DGK + MG Sbjct: 395 GTIEAAEVREGDPSPDGAGPLVMARGIEIGHIFQLGSKYTDAFTADVLGEDGKPVRLTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VA V E HD G+ WP +VAPF + L I D R + A L ++ Sbjct: 455 SYGIGVSRLVAVVAEQHHDELGLRWPSTVAPFDVHL-VIANKDAQARAGATALAADLDRL 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 G +V DD G +F A+LLG P V+VG + +D VE++ R +G ++ Sbjct: 514 GVEVLLDDRQASPGVKFKDAELLGMPWIVVVG-RGWADGVVELRDRFSGQTREL 566 >gi|15609982|ref|NP_217361.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv] gi|148662686|ref|YP_001284209.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] gi|148824035|ref|YP_001288789.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis F11] gi|161350062|ref|NP_337423.2| prolyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551] gi|167967198|ref|ZP_02549475.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] gi|215404817|ref|ZP_03416998.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987] gi|215412677|ref|ZP_03421395.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A] gi|215428284|ref|ZP_03426203.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis T92] gi|215431786|ref|ZP_03429705.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis EAS054] gi|218754593|ref|ZP_03533389.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503] gi|219558862|ref|ZP_03537938.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis T17] gi|253798069|ref|YP_003031070.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis KZN 1435] gi|254232940|ref|ZP_04926267.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis C] gi|254365491|ref|ZP_04981536.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis str. Haarlem] gi|254551909|ref|ZP_05142356.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260201976|ref|ZP_05769467.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|260206156|ref|ZP_05773647.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis K85] gi|289444396|ref|ZP_06434140.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|289553367|ref|ZP_06442577.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis KZN 605] gi|289571033|ref|ZP_06451260.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis T17] gi|289575546|ref|ZP_06455773.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis K85] gi|289746643|ref|ZP_06506021.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987] gi|289751506|ref|ZP_06510884.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis T92] gi|289754953|ref|ZP_06514331.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis EAS054] gi|289763021|ref|ZP_06522399.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis GM 1503] gi|297635458|ref|ZP_06953238.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207] gi|297732457|ref|ZP_06961575.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506] gi|298526313|ref|ZP_07013722.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A] gi|306777129|ref|ZP_07415466.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu001] gi|306781035|ref|ZP_07419372.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu002] gi|306789713|ref|ZP_07428035.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu004] gi|306794347|ref|ZP_07432649.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu005] gi|306798770|ref|ZP_07437072.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu006] gi|306804616|ref|ZP_07441284.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu008] gi|306807350|ref|ZP_07444018.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu007] gi|306968909|ref|ZP_07481570.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu009] gi|306973245|ref|ZP_07485906.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu010] gi|307080954|ref|ZP_07490124.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu011] gi|307085549|ref|ZP_07494662.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu012] gi|313659789|ref|ZP_07816669.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475] gi|2501040|sp|O05814|SYP_MYCTU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|2078014|emb|CAB08445.1| PROBABLE PROLYL-TRNA SYNTHETASE PROS (PROLINE--TRNA LIGASE) (PRORS) (GLOBAL RNA SYNTHESIS FACTOR) (PROLINE TRANSLASE) [Mycobacterium tuberculosis H37Rv] gi|124601999|gb|EAY61009.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis C] gi|134151004|gb|EBA43049.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis str. Haarlem] gi|148506838|gb|ABQ74647.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] gi|148722562|gb|ABR07187.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis F11] gi|253319572|gb|ACT24175.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis KZN 1435] gi|289417315|gb|EFD14555.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|289437999|gb|EFD20492.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis KZN 605] gi|289539977|gb|EFD44555.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis K85] gi|289544787|gb|EFD48435.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis T17] gi|289687171|gb|EFD54659.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987] gi|289692093|gb|EFD59522.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis T92] gi|289695540|gb|EFD62969.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis EAS054] gi|289710527|gb|EFD74543.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis GM 1503] gi|298496107|gb|EFI31401.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A] gi|308214498|gb|EFO73897.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu001] gi|308326143|gb|EFP14994.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu002] gi|308333812|gb|EFP22663.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu004] gi|308337323|gb|EFP26174.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu005] gi|308340981|gb|EFP29832.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu006] gi|308346273|gb|EFP35124.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu007] gi|308348796|gb|EFP37647.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu008] gi|308353522|gb|EFP42373.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu009] gi|308357363|gb|EFP46214.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu010] gi|308361316|gb|EFP50167.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu011] gi|308364916|gb|EFP53767.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu012] gi|323718544|gb|EGB27714.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis CDC1551A] gi|326904458|gb|EGE51391.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis W-148] gi|328457842|gb|AEB03265.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis KZN 4207] Length = 582 Score = 215 bits (548), Expect = 1e-53, Method: Composition-based stats. Identities = 101/259 (38%), Positives = 149/259 (57%), Gaps = 1/259 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ASHKL++R G I + G+YSWLPLG + L N+ +IR+E Sbjct: 4 RMSELFLRTLRDDPADAEVASHKLLIRAGYIRPVAPGLYSWLPLGLRVLRNIERVIRDEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 64 NAIGGQEILFPALLPRAPYETTNRWTQYGDSVFRLKDRRGNDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R+REF+MKD+YSFD+ G K +Y+ +Y Sbjct: 124 YSSYKDFPLTLYQIQTKYRDEARPRAGILRAREFVMKDSYSFDIDAAGLKAAYHAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTDFD 240 RIF RL ++ + + A SG +GG S EF+ + +GE V C + + + T Sbjct: 184 QRIFDRLQVRYVIVSAVSGAMGGSASEEFLAESPSGEDAFVRCLESGYAANVEAVVTARP 243 Query: 241 DIISLNSIVEQWTAPYAAT 259 D + ++ + E T Sbjct: 244 DTLPIDGLPEAVVHDTGDT 262 Score = 127 bits (318), Expect = 5e-27, Method: Composition-based stats. Identities = 67/174 (38%), Positives = 93/174 (53%), Gaps = 4/174 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ V ARGIE+GHIF G+KY+ +A G DGK + MG Sbjct: 395 GTIEAAEVREGDPSPDGAGPLVMARGIEIGHIFQLGSKYTDAFTADVLGEDGKPVRLTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VA V E HD G+ WP +VAPF + L I D R + A L ++ Sbjct: 455 SYGIGVSRLVAVVAEQHHDELGLRWPSTVAPFDVHL-VIANKDAQARAGATALAADLDRL 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 G +V DD G +F A+LLG P V+VG + +D VE++ R +G ++ Sbjct: 514 GVEVLLDDRQASPGVKFKDAELLGMPWIVVVG-RGWADGVVELRDRFSGQTREL 566 >gi|94968092|ref|YP_590140.1| prolyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345] gi|122986393|sp|Q1IST4|SYP_ACIBL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|94550142|gb|ABF40066.1| prolyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345] Length = 587 Score = 215 bits (548), Expect = 1e-53, Method: Composition-based stats. Identities = 106/236 (44%), Positives = 146/236 (61%), Gaps = 2/236 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R SK F+P L+E P DAE+ASHK ++R G I Q + GIYS+L LG ++++ + I+REE Sbjct: 3 RWSKLFIPTLREAPADAEVASHKFLVRAGYIRQLAAGIYSYLFLGNRSMNKIIGIVREEM 62 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 ++ G E +P L ++W SGR+ G M RL DR + G THEE+MT+I R Sbjct: 63 DKIG-QEYYLPALNPREIWEASGRWAVMGDNMFRLKDRKGAELCLGMTHEEIMTEIARKE 121 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 ++SY+ LP +YQIQ KFRDE RPR G++R R+F+MKD+YSFD+ G SY K +Y Sbjct: 122 LRSYKQLPQIWYQIQTKFRDEPRPRSGLLRVRQFIMKDSYSFDIDAAGLDISYQKHHDAY 181 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 RIF R GLK + + A+SG +GG S EF+V D GE V + + E Sbjct: 182 CRIFDRCGLKYVVVHADSGAMGGSGSQEFMVYTDAGEDLVASCANCS-YAANVEKA 236 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 97/196 (49%), Gaps = 3/196 (1%) Query: 250 EQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 + + ++D+ + P + +E+GHIF G KY+ M A DG Sbjct: 390 PGESFQFTGSADLRMVAEGEPCPNCGHALKVGKTVEIGHIFKLGYKYTDAMGARVLDKDG 449 Query: 308 KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 K+ MGSYGIG R++ A +E S+D G P +APF++ + D+ E+ Sbjct: 450 KEVMPIMGSYGIGMERILTASVEQSNDDNGFWLPAQIAPFEVVVTPTNVSDEKLAKGAEE 509 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 I A+L G DV DD E+ G +F ADL+G P+++ VG KFV KVE+ HR T Sbjct: 510 IAAKLEAAGFDVILDDRDERPGVKFKDADLVGIPVRINVGKKFVE-GKVEVIHRSTRESL 568 Query: 428 DMSLEEVINYASHRFS 443 D ++ E++ + Sbjct: 569 DATIPEIVEKIAAWLK 584 >gi|268679949|ref|YP_003304380.1| prolyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946] gi|268617980|gb|ACZ12345.1| prolyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946] Length = 567 Score = 215 bits (548), Expect = 1e-53, Method: Composition-based stats. Identities = 109/287 (37%), Positives = 159/287 (55%), Gaps = 4/287 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + P ++ P+DA + SH+ ++R G I Q G+Y++LP+G+ LD + +++EE Sbjct: 1 MKFSKLYAPTTKDAPKDATLPSHQYLVRGGFIVQVGSGLYNFLPMGKIVLDKIRNVVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + TGA E+ + + A+LW +SGRYD +GKE+ R+ DR + + GPTHEEV+ DI R+ Sbjct: 61 MDETGAQEIQMGVVSPAELWKQSGRYDVFGKELCRIKDRKENEFVLGPTHEEVVVDIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI KFRDE RPRFG++R REF+MKD YSF K ++ M + Sbjct: 121 RINSYKQLPLHLYQITTKFRDEARPRFGLLRGREFIMKDGYSFHEDEASMKAEFDVMEQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF+RLGL + A+SG IGG S EF+VLA GE + + Sbjct: 181 YTKIFNRLGLDFRAVEADSGAIGGSGSKEFMVLAQNGEDDIVVCEQCSYAANIEAAKRAP 240 Query: 241 DIISLNSIVEQWTAPYAAT----SDVHNEKLFDSLPENKRVSARGIE 283 +L + + DV N D+ K V + I Sbjct: 241 KTTTLEAPEANLSKFKTPDMKTIEDVCNFFKVDAFYSIKAVVKKAIY 287 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 66/233 (28%), Positives = 102/233 (43%), Gaps = 6/233 (2%) Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN-----EKLFDS 270 G + C K ++D + ++ + + E + Sbjct: 336 IGPVGLECVKFYIDLELKEAKNLICGANEVDYHMVGVGMFNFKEERYADLVAVKEGDVCA 395 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 + +GIEVGHIF G KY+ M ATF +GK MG YG+G R+VA +IE Sbjct: 396 CCGGRLGITKGIEVGHIFQLGQKYAKAMGATFLDKNGKAQPFYMGCYGVGVSRLVAVMIE 455 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 +SHD KG IW AP+ + +I + D+ E+IY+ L + V DD E+ G Sbjct: 456 ASHDEKGCIWNKQTAPYLLDIIVSNSKDEAQSAYAEEIYSALMQERLSVLLDDRNERFGF 515 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 + +L+G P +IVG K + + VEI R T + + EE + + Sbjct: 516 KMKDYELIGLPYALIVG-KELEEGFVEIVERKTLEKTVVKKEEALLKLRELLA 567 >gi|116075451|ref|ZP_01472711.1| threonyl-tRNA synthetase [Synechococcus sp. RS9916] gi|116067648|gb|EAU73402.1| threonyl-tRNA synthetase [Synechococcus sp. RS9916] Length = 609 Score = 215 bits (548), Expect = 1e-53, Method: Composition-based stats. Identities = 69/436 (15%), Positives = 133/436 (30%), Gaps = 36/436 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD L L + + + G+ W P G + + R+ G + Sbjct: 203 EEALRRDHRRIGTDLDLFS-IEDEAGAGLVFWHPRGARMRLLIEDFWRQAHFEGGYELLY 261 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + LW SG D Y + M +++ P + + S ++SYR LP Sbjct: 262 TPHVADISLWKTSGHLDFYSESMFGPMVVDEREYQLKPMNCPFHVLTYASTLRSYRELPI 321 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + ++ +R E G+MR R F DA+ F L + S ++ RI Sbjct: 322 RWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDE-ILRILDLTERILSTFD 380 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 K+ + + P D + + Sbjct: 381 FKNYEINLSTRPEKS-----------------IGDDAVWDLATKGLIEALERKGWDYKVD 423 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 E A Y D+ K+ D++ + S ++ F ++ L A + + Sbjct: 424 EGGGAFYGPKIDL---KIEDAIGRMWQCSTIQLD----FNLPERFKLDYVAA--DSSKQR 474 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + + R + E+ + E + Sbjct: 475 PIMIHRAIFGSLERFFGIMTENYAGDFPFWLAPEQIRLLPVT-------DEVQSYAESLC 527 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +L G D GE++G + + P+ ++G+K + ++ R G + Sbjct: 528 DQLKAAGVRASVDRSGERLGKLIRTGEKMKIPVLAVIGAKEAEQASASLRSRRDGDLGLV 587 Query: 430 SLEEVINYASHRFSNN 445 + +I A N Sbjct: 588 GADALIEAARQANQNR 603 >gi|295396369|ref|ZP_06806535.1| proline--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030] gi|294970809|gb|EFG46718.1| proline--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030] Length = 609 Score = 215 bits (548), Expect = 1e-53, Method: Composition-based stats. Identities = 95/240 (39%), Positives = 146/240 (60%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S F+ L+E P DA++ SHKL+ R I + + GIY+WLPLG + LD V AI+R+E Sbjct: 4 RMSTLFVRTLKEEPADADVKSHKLLHRASYIRRSAPGIYTWLPLGLRVLDKVEAIVRDEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 ++ G+ E+ P L A+ + +SGR++++G+ + RL DR + PTHEEV T + + Sbjct: 64 SKAGSQEVHFPALLPAEPYEKSGRWEAFGEGIFRLQDRKKADYLLAPTHEEVFTLLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP + YQIQ K+RDE RPR G++R REF+MKDAYSFD G +Y KM +Y Sbjct: 124 YSSYKDLPASLYQIQTKYRDEARPRAGLLRGREFIMKDAYSFDTDDAGLDAAYEKMRKAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + +++RL L + + A G +GG +HEF+ ++ GE + + + T + Sbjct: 184 INVYNRLQLPFVMVEATPGAMGGSGTHEFLYPSEVGEDTYVRTDGGYAANVEAVTTVVPE 243 Score = 136 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 61/201 (30%), Positives = 101/201 (50%), Gaps = 11/201 (5%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 + D P+ + ARG+E+G IF GT+Y+ + + +GK V MG Sbjct: 409 EFIEAAEVVAGDPAPDGSGELQLARGVEIGQIFKLGTRYAEALGLSVLDENGKARVVTMG 468 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG RV+A + E D KG++WP ++AP + ++ D D E++ A + K Sbjct: 469 SYGIGVSRVLACIAEEHADDKGLVWPANLAPADVHIVATG-KDAQVFDVAEELTAEVEKA 527 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE-- 432 G V DD G +F A+LLG P V+VG + + D VE++ R TG ++ ++ Sbjct: 528 GYTVLLDDRPKVSPGMKFGDAELLGMPTIVVVG-RGLKDGVVELRDRATGETTNLPVDTA 586 Query: 433 --EVINYASHRFS--NNRPVL 449 ++++ + + NN +L Sbjct: 587 GQKIVDAIAEKLDAINNIELL 607 >gi|284929344|ref|YP_003421866.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [cyanobacterium UCYN-A] gi|284809788|gb|ADB95485.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [cyanobacterium UCYN-A] Length = 608 Score = 215 bits (548), Expect = 1e-53, Method: Composition-based stats. Identities = 74/442 (16%), Positives = 150/442 (33%), Gaps = 39/442 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD +L L + G+ W P G + +REEQ + G + + Sbjct: 196 EEALKRDHRKLGKELGLFI-FSNSVGPGLPLWTPKGTIIRSVLENFLREEQLKRGYLPVV 254 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKA------MIYGPTHEEVMTDIFRSHIKS 124 P + DL+ SG + +Y ++M L N+ A + P + I++S +KS Sbjct: 255 TPHIGKVDLFKTSGHWQNYKEDMFPLMSDNEVARGEEIGFVLKPMNCPFHIQIYKSDLKS 314 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR+LP + +R E G + D +TP+ + + L + Sbjct: 315 YRDLPVRLAEFGTVYRYEKSGELGGLTRVRGFTVDDSHLFVTPDQLDDEFLNVVNLILSV 374 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F L LK+ R D + S + + + + Sbjct: 375 FENLQLKNFKARLS--------------FRDPSSNKYIGSDEVWEKSQNAIYRAVKMLNI 420 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 E A Y D D+L ++ ++ + + G Sbjct: 421 DYFEAEGEAAFYGPKLDFI---FQDALDREWQLGTVQVDYNLP--------ERFNLEYIG 469 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 G H + G++ + ++ + +P ++P ++ ++ + + D Sbjct: 470 EKGDKHRPIMIHRAPFGSLERLIGILI---EEYVGDFPLWLSPVQVRILPV---SDLYLD 523 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + + D GE++G + P+ I+GSK + + + I+ R + Sbjct: 524 YAKGVMQTMLMSKIRAEVDTSGERLGKMIRKGEKEKIPVMAIIGSKEMETNSLNIRTRKS 583 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G M + + + SN+ Sbjct: 584 GELGLMPINDFMKSILETISNH 605 >gi|326382934|ref|ZP_08204624.1| prolyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395] gi|326198524|gb|EGD55708.1| prolyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395] Length = 576 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 105/271 (38%), Positives = 149/271 (54%), Gaps = 5/271 (1%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S FL L+++P DAE+ SHKL++R G I + + GIY WLPLG K V ++REE + Sbjct: 1 MSNLFLRTLRDDPADAEVPSHKLLVRAGYIRRAAPGIYEWLPLGLKVFRAVENLVREEMD 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+ +P L D + +GR+ YG + R+ DR M+ GPTHEE+ T + + Sbjct: 61 AMGAQEILLPALLPRDPYETTGRWTEYGPALFRVKDRKGADMMLGPTHEEIFTQLVKGEY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP T YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G + SY+ +Y Sbjct: 121 SSYKDLPVTLYQIQTKYRDEERPRAGLLRGREFVMKDSYSFDIDDAGLQASYDAHRAAYQ 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RIF RLG+K + + A SG +GG S EF+ + GE F + E Sbjct: 181 RIFDRLGVKYVIVAATSGAMGGSASEEFLAECEVGE-DTFVRSTESGYAANVEAVVTPAP 239 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + P A D + D+L + Sbjct: 240 APIPLD----GQPAAVVHDTGDTPTIDTLVD 266 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 62/183 (33%), Positives = 93/183 (50%), Gaps = 4/183 (2%) Query: 258 ATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 + + D P+ K V +GIE+GHIF G KY+ + G +GK MG Sbjct: 390 GVIEAAEVRAGDPSPDGKGVLETAKGIEIGHIFQLGRKYTDAFAFDVLGENGKPVRPTMG 449 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R+VA + E HD KG+ WP VAPF + L I D+ +++ A L Sbjct: 450 SYGLGVSRMVAVLAEQLHDEKGLRWPREVAPFDVHL-VIANKDEAAVAGAQRLAADLDAA 508 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G V +DD G +F A+LLG P+ V+VG + +D +EI+ RL+G ++ + Sbjct: 509 GVSVLFDDRKASPGVKFKDAELLGMPVVVVVG-RGWADGTIEIRDRLSGETTAAPVDGAV 567 Query: 436 NYA 438 + Sbjct: 568 DAV 570 >gi|164657235|ref|XP_001729744.1| hypothetical protein MGL_3288 [Malassezia globosa CBS 7966] gi|159103637|gb|EDP42530.1| hypothetical protein MGL_3288 [Malassezia globosa CBS 7966] Length = 635 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 70/451 (15%), Positives = 141/451 (31%), Gaps = 40/451 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD + L M H S G WLP G + + + I+ E Sbjct: 210 MTEYKHFLAEAAKRDHRRIGREQELF--MFHDLSPGSCFWLPHGARIYNTLQDFIKSEYR 267 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G E+ P + ++ LW SG + +Y +M L+ + P + +F S Sbjct: 268 KRGFDEVISPNMYNSKLWETSGHWANYKDDMFVLSVDKET-FALKPMNCPGHCLMFASRD 326 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY+ LP F + R+E G+ R R F+ DA+ F + N F Sbjct: 327 RSYKELPLRFADFGVIHRNEASGALSGLTRVRRFVQDDAHIFCRASQIEDEMINC-FDFL 385 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ G + P E A+ Sbjct: 386 QTVYGHFGFSFKM-ELSTRPEKHLGDVETWDAAEKRLASALDRF---------------- 428 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + A Y D+ + D++ + + ++ F ++ + Sbjct: 429 VPGRWELNPGDGAFYGPKIDI---TISDAMRREHQCATIQLD----FQLPQRF----NLE 477 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG-KGIIWPDSVAPFKISLINIKAHDQV 360 +K G + + R V +E + + Q Sbjct: 478 YKTPQGGAEADKHTERPVMIHRAVVGSLERFIAILIENFAGKWPFWLSPRQVLVVPVTQS 537 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + E++ A L G D + + +L + +VG + V +++ Sbjct: 538 VYEYAEEVRALLWDRGFFADADLSDNTLNKKIRNGELAQYNFVFVVGHEEKETRSVNVRN 597 Query: 421 RLT------GIREDMSLEEVINYASHRFSNN 445 R G + + L++++ + Sbjct: 598 RDNDPKVMKGKTDTIKLDDILAKLQKLKESR 628 >gi|300173545|ref|YP_003772711.1| threonyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811] gi|299887924|emb|CBL91892.1| Threonyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811] Length = 655 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 72/430 (16%), Positives = 144/430 (33%), Gaps = 35/430 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + RD L L + G+ WLP G V I +++ G Sbjct: 238 RREEAKERDHRTIGRDLDLF-FTSQEVGSGLPVWLPNGATIRRQVERYITDKELANGYQH 296 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAM-IYGPTHEEVMTDIFRSHIKSYRN 127 + P L + +L+ SG +D Y ++M D D P + +F+ +SYR Sbjct: 297 VYTPVLSNLNLYKTSGHWDHYREDMFPPMDMGDGEFLELRPMNCPSHIMVFKHKPRSYRE 356 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 LP ++ + R E + + + + PE + + + + ++ Sbjct: 357 LPIRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVEPEKIEEEFKSILTMMMAVYRD 416 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS-ENTDFDDIISLN 246 + R D T+ + D M + + DD+ Sbjct: 417 FNITDYRFRLS--------------YRDPKNTEKYFDDDEMWEKSQAQLKSAMDDLKLDY 462 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 E A Y DV + +L + +S ++ F ++ T+ GAD Sbjct: 463 YEAEGEAAFYGPKLDVQTKT---ALGNEETMSTIQLD----FLLPERFD----LTYIGAD 511 Query: 307 GKDHYV--QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 G+D++ + +G M A + + G W ++P ++ +I + + Sbjct: 512 GQDNHRPVMLHRGIVGTMERFTAYLIEMYKGAFPTW---LSPLQVQIIPVNLG--AHGEY 566 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + + +L VG + ++G A P +++G V V ++ Sbjct: 567 ADGVQKKLQAVGLRANVETKEAKMGYLIREAQTNKIPYTLVLGDSEVDAQTVTVRKYGEE 626 Query: 425 IREDMSLEEV 434 + MS + Sbjct: 627 KTQTMSFIDF 636 >gi|41409011|ref|NP_961847.1| prolyl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis K-10] gi|81831677|sp|Q73VU8|SYP_MYCPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|41397370|gb|AAS05230.1| ProS [Mycobacterium avium subsp. paratuberculosis K-10] Length = 582 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 122/436 (27%), Positives = 185/436 (42%), Gaps = 52/436 (11%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ SHKL++R G I + G+YSWLPLG + L + I+REE Sbjct: 4 RMSQLFLRTLRDDPADAEVPSHKLLIRAGYIRPVAPGLYSWLPLGLRVLRRIEHIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 64 NAIGGQEILFPALLPRAPYEATNRWTEYGDSVFRLQDRRGNDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G K +Y+ +Y Sbjct: 124 YSSYKDFPVLLYQIQNKYRDEARPRAGILRVREFVMKDSYSFDIDDAGLKAAYHAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGET-QVFCSKDFMDFPIPSENTDFD 240 RIF RL ++ + + A SG +GG S EF+ + GE V C + + + T Sbjct: 184 QRIFARLQVRYVIVSAVSGAMGGSASEEFLAESPVGEDTFVRCLESGYAANVEAVITARP 243 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D VE P A D + +L + + G V + Sbjct: 244 D----PQPVEGL--PEAVVHDTGDTPTIATLVDWANRAGLGRAVTAADTL-----KNVLL 292 Query: 301 TFKGADGKDHYVQMGSYGIGA--MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + G + +G G + + A +E + + PF + Sbjct: 293 KVRQPGGDWELLAIGLPGDREVDDKRLGAALEPAEYVLLDDADFARYPFLVKGYIGPK-- 350 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDM-----------GEQIGSQFAVADLLGFPLQVIVG 407 L G D E G ++G ++ G Sbjct: 351 ------------ALKDNGVRYLVDPRVVDGTSWITGADE-PGR-----HVVG----LVAG 388 Query: 408 SKFVSDSKV---EIKH 420 F +D + E++ Sbjct: 389 RDFTADGTIEAAEVRD 404 Score = 136 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 66/175 (37%), Positives = 91/175 (52%), Gaps = 4/175 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ VSARGIEV HIF G KY+ +A G DGK + MG Sbjct: 395 GTIEAAEVRDGDPSPDGAGPLVSARGIEVAHIFQLGRKYTDAFTADVLGEDGKPVRLTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R+VA + E HD G+ WP SVAPF + L I D R + L ++ Sbjct: 455 SYGLGVSRMVAVIAEQHHDELGLRWPASVAPFDVHL-VIANKDAQARAGATALADDLDRL 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 G +V DD G +F A+LLG P V+VG + +D VE++ R G +++ Sbjct: 514 GVEVLLDDRQASPGVKFKDAELLGVPWIVVVG-RGWADGVVELRDRFAGQTRELA 567 >gi|254819680|ref|ZP_05224681.1| prolyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950] Length = 583 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 121/436 (27%), Positives = 186/436 (42%), Gaps = 52/436 (11%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ASHKL++R G I + G+YSWLPLG + L + I+REE Sbjct: 4 RMSQLFLRTLRDDPADAEVASHKLLIRAGYIRPVAPGLYSWLPLGLRVLRRIEGIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 64 NAIGGQEILFPALLPRAPYEATNRWTEYGDSVFRLKDRRGSDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ K+RDE RPR G++R REFLMKD+YSFD+ G K +Y+ +Y Sbjct: 124 YSSYKDFPVLLYQIQNKYRDEARPRAGILRVREFLMKDSYSFDVDDAGLKAAYHAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGET-QVFCSKDFMDFPIPSENTDFD 240 RIF RL ++ + + A SG +GG S EF+ + GE V C + + + T Sbjct: 184 QRIFARLQVRYVIVSAVSGAMGGSASEEFLAESPVGEDTFVRCLESGYAANVEAVVTSRP 243 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + ++ P A D + +L + + G V + Sbjct: 244 EAQPID------GLPEAVVHDTGDTPTIATLVDWANTADLGRTVTAADTL-----KNVLL 292 Query: 301 TFKGADGKDHYVQMGSYGIGA--MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + G + +G G + + A +E + + PF + Sbjct: 293 KVREPGGDWELLAIGLPGDREVDDKRLGAALEPAEYAMLDDADFAKYPFLVKGYIGPK-- 350 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDM-----------GEQIGSQFAVADLLGFPLQVIVG 407 L G D E G ++G ++ G Sbjct: 351 ------------ALRDNGVRYLVDPRVVDGTSWITGADE-PGR-----HVVG----LVAG 388 Query: 408 SKFVSDSKV---EIKH 420 F +D + E++ Sbjct: 389 RDFTADGTIEAAEVRD 404 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 67/175 (38%), Positives = 92/175 (52%), Gaps = 4/175 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ VSARGIEV HIF G KY+ +A G DGK + MG Sbjct: 395 GTIEAAEVRDGDPSPDGAGPLVSARGIEVAHIFQLGRKYTDAFTADVLGEDGKPVRLTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R+VA + E HD G+ WP SVAPF + L I D R ++ L ++ Sbjct: 455 SYGLGVSRMVAVIAEQHHDELGLRWPSSVAPFDVHL-VIANKDDRARTGATELAGELDRL 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 G DV DD G +F A+LLG P V+VG + +D VE++ R G +++ Sbjct: 514 GVDVLLDDRQASPGVKFKDAELLGVPWIVVVG-RGWADGVVELRDRFGGQTRELA 567 >gi|300726434|ref|ZP_07059882.1| threonine--tRNA ligase [Prevotella bryantii B14] gi|299776282|gb|EFI72844.1| threonine--tRNA ligase [Prevotella bryantii B14] Length = 654 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 75/444 (16%), Positives = 147/444 (33%), Gaps = 36/444 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L + KG+ WLP G + + ++R Sbjct: 232 EYLVMLEEAKKRDHRKIGKEMELFM-FSERVGKGLPIWLPKGTQLRLRLQELLRRVLKPY 290 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + S +L++ SG + YGK+ + D+ + P + +I+ Sbjct: 291 NYQEVITPGIGSKNLYITSGHWAHYGKDAFQPIHTPEEDEEYMLKPMNCPHHCEIYARKP 350 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + FR E G+ R R F DA+ F P+ K + Sbjct: 351 RSYKDLPLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVR-PDQVKAEFENNIDII 409 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++F G + + S + + + + Sbjct: 410 QKVFSIFGFNDYEAQISLRD-------------PKDTEKYIGSDEIWEESQNAIREACKE 456 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 E A Y D + D++ ++ ++ Sbjct: 457 KGLKAVEEEGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFKLE 505 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + G++ AV+ G+ +W + I + Sbjct: 506 YTDVDNTKKTPVMIHRAPFGSLERFTAVLIEHTAGRFPLW------LIPDQVAILPISEK 559 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ A L K + DD E++G + +L P VIVG K V ++ Sbjct: 560 YNDYAKKVKAYLDKHDVRGYIDDRNEKVGRKIRDNELKRVPYMVIVGEKEAEGGLVSMRK 619 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 + G + M++EE + + Sbjct: 620 QGGGDQASMTMEEFAKRINEEVAE 643 >gi|254776130|ref|ZP_05217646.1| prolyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC 25291] Length = 582 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 97/241 (40%), Positives = 138/241 (57%), Gaps = 1/241 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ SHKL++R G I + G+YSWLPLG + L + I+REE Sbjct: 4 RMSQLFLRTLRDDPADAEVPSHKLLIRAGYIRPVAPGLYSWLPLGLRVLRRIEHIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 64 NAIGGQEILFPALLPRAPYEATNRWTEYGDSVFRLQDRRGNDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G K +Y+ +Y Sbjct: 124 YSSYKDFPVLLYQIQNKYRDEARPRAGILRVREFVMKDSYSFDIDDAGLKAAYHAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGET-QVFCSKDFMDFPIPSENTDFD 240 RIF RL ++ + + A SG +GG S EF+ + GE V C + + + T Sbjct: 184 QRIFARLQVRYVIVSAVSGAMGGSASEEFLAESPVGEDTFVRCLESGYAANVEAVITARP 243 Query: 241 D 241 D Sbjct: 244 D 244 Score = 136 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 66/175 (37%), Positives = 91/175 (52%), Gaps = 4/175 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ VSARGIEV HIF G KY+ +A G DGK + MG Sbjct: 395 GTIEAAEVRDGDPSPDGAGPLVSARGIEVAHIFQLGRKYTDAFTADVLGEDGKPVRLTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R+VA + E HD G+ WP SVAPF + L I D R + L ++ Sbjct: 455 SYGLGVSRMVAVIAEQHHDELGLRWPASVAPFDVHL-VIANKDAQARAGATALADDLDRL 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 G +V DD G +F A+LLG P V+VG + +D VE++ R G +++ Sbjct: 514 GVEVLLDDRQASPGVKFKDAELLGVPWIVVVG-RGWADGVVELRDRFAGQTRELA 567 >gi|118463800|ref|YP_882877.1| prolyl-tRNA synthetase [Mycobacterium avium 104] gi|152112931|sp|A0QIY9|SYP_MYCA1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|118165087|gb|ABK65984.1| prolyl-tRNA synthetase [Mycobacterium avium 104] Length = 582 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 97/241 (40%), Positives = 138/241 (57%), Gaps = 1/241 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ SHKL++R G I + G+YSWLPLG + L + I+REE Sbjct: 4 RMSQLFLRTLRDDPADAEVPSHKLLIRAGYIRPVAPGLYSWLPLGLRVLRRIEHIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 64 NAIGGQEILFPALLPRAPYEATNRWTEYGDSVFRLQDRRGNDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G K +Y+ +Y Sbjct: 124 YSSYKDFPVLLYQIQNKYRDEARPRAGILRVREFVMKDSYSFDIDDAGLKAAYHAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGET-QVFCSKDFMDFPIPSENTDFD 240 RIF RL ++ + + A SG +GG S EF+ + GE V C + + + T Sbjct: 184 QRIFARLQVRYVIVSAVSGAMGGSASEEFLAESPVGEDTFVRCLESGYAANVEAVITARP 243 Query: 241 D 241 D Sbjct: 244 D 244 Score = 136 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 66/175 (37%), Positives = 91/175 (52%), Gaps = 4/175 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ VSARGIEV HIF G KY+ +A G DGK + MG Sbjct: 395 GTIEAAEVRDGDPSPDGAGPLVSARGIEVAHIFQLGRKYTDAFTADVLGEDGKPVRLTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R+VA + E HD G+ WP SVAPF + L I D R + L ++ Sbjct: 455 SYGLGVSRMVAVIAEQHHDELGLRWPASVAPFDVHL-VIANKDAQARAGATALADDLDRL 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 G +V DD G +F A+LLG P V+VG + +D VE++ R G +++ Sbjct: 514 GVEVLLDDRQASPGVKFKDAELLGVPWIVVVG-RGWADGVVELRDRFAGQTRELA 567 >gi|315226277|ref|ZP_07868065.1| proline--tRNA ligase [Parascardovia denticolens DSM 10105] gi|315120409|gb|EFT83541.1| proline--tRNA ligase [Parascardovia denticolens DSM 10105] Length = 590 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 106/283 (37%), Positives = 153/283 (54%), Gaps = 2/283 (0%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S FL L+++P DA++ S KL++R G I + G+YSWLPLG K L+ + AIIREE N Sbjct: 1 MSTLFLRTLRDDPADADVDSAKLLIRAGYIRKIGPGLYSWLPLGLKVLNKIEAIIREEIN 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+ P + + + S R++ YG + R DR+ + PTHEE+ T + + Sbjct: 61 ALGAQEVHFPAMMPREPYQMSNRWEEYGDNIFRFKDRHGADYLLAPTHEEMFTLMVKDMY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP T YQIQ K+RDE RPR G++R R+F+MKDAYSFD+ EG K SY +Y Sbjct: 121 TSYKDLPVTLYQIQGKYRDEFRPRAGMIRGRQFVMKDAYSFDIDEEGLKKSYLAERAAYE 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RIFHRL + + + A SGP+GG S EF+ GE + + + + T D Sbjct: 181 RIFHRLAVDYVIVHAVSGPMGGSESEEFLAPLPIGEDTFALAPSGKAWNVEALTTPAMDP 240 Query: 243 ISLNSIVEQWTA--PYAATSDVHNEKLFDSLPENKRVSARGIE 283 + + P + T D +L S P + + Sbjct: 241 VDYSQTPAATVVDTPDSPTIDSLVSQLNASSPREDGRAWAASD 283 Score = 146 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 62/172 (36%), Positives = 89/172 (51%), Gaps = 2/172 (1%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 RG+E+G +F G KYS M +GK V MG YGIG RV++ + E+ Sbjct: 417 GSGPLSFERGVEIGQVFQLGLKYSKAMGLNVLNQNGKAVPVWMGCYGIGVSRVMSCIAEA 476 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGS 390 HD KG+IWP SVAP ++ LI DQ D E + L K +V +DD G Sbjct: 477 HHDDKGLIWPLSVAPAQVHLIATG-KDQKAYDLAESLLGDLEKADVEVLYDDRAKMSPGV 535 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 +F ++LLG P+ V+VG +SD VEI++R TG ++ + L++ Sbjct: 536 KFKDSELLGLPMIVVVGRDTLSDGTVEIRNRATGEKDVVPLDQAAQAVQDLL 587 >gi|83319726|ref|YP_424209.1| threonyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283612|gb|ABC01544.1| threonyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 639 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 77/436 (17%), Positives = 160/436 (36%), Gaps = 37/436 (8%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD + + +L + G G+ WLP G + + +R+++ I + P + Sbjct: 236 RDHRLINKRLNIF-GFDQLVGAGLPLWLPNGFIVKNEIEKYLRQKEWEYDYIPVETPPIG 294 Query: 76 SADLWVESGRYDSYGKEMLRLADR---NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + +L+ SG +D YG++M + + +D+ I P + +++ +SYR+LP Sbjct: 295 TVELYKTSGHWDHYGEDMFQPFNGGKGSDEQFILRPMNCPHHIAVYKQEQRSYRDLPLRI 354 Query: 133 YQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 + ++ R E G+ R R + D++ F + + R K Sbjct: 355 CEHAIQHRFESSGSLTGLERVRGMKLTDSHIFVRSDQIEDEF-------------RSTYK 401 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDIISLNSIVE 250 I ++ I D + L D + F D D S D+ Sbjct: 402 LISEVLKTFNIQIDYLS--LSLRDPNDKVKFYKDDLMWDKAESSLEKVLIDLGLKYEKRI 459 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D+ ++ + VS ++ F T+ D K Sbjct: 460 GDAAFYGPKLDI---QIKTAQNHEITVSTIQLDFLMPNKFD--------LTYIDKDQKLV 508 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 M G + I + + + P +AP ++ +I I + + I+ Sbjct: 509 RPIMIHR--GLIGTYERFIATLLEQTKGVLPLWLAPKQVEIIPI---SESNLEYANLIHQ 563 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +L K D E++ + A P Q+++G+K V ++ + + + + +S Sbjct: 564 KLKKEFIRSHIDLRDERLSYKIRDAQTKKVPYQLVLGNKEVENNTITYRQYGSDAQITVS 623 Query: 431 LEEVINYASHRFSNNR 446 ++E I+ + ++ + Sbjct: 624 IQEFIDMLKQQINDKK 639 >gi|325120065|emb|CBZ55617.1| hypothetical protein NCLIV_060420 [Neospora caninum Liverpool] Length = 781 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 84/469 (17%), Positives = 146/469 (31%), Gaps = 54/469 (11%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L L S G WLP G K + + A +REE G E+ Sbjct: 327 EEAKKRDHRMLGQNLHLF-FFDTNVSPGSCFWLPDGAKVYNKLCAFMREEYRFRGFQEVI 385 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + S DLW SG Y +Y + M L D K P + +F+ SYR LP Sbjct: 386 SPNIFSCDLWKMSGHYQNYKENM-YLFDVEGKEWGLKPMNCPGHCIMFKHLAPSYRQLPL 444 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + + ++ + G Sbjct: 445 RLADFGVLHRNELSGSLTGLTRVRRFQQDDAHIFCRMDQVKQE-VADALNFLFFVYDQFG 503 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 F + T + + D + ++ + Sbjct: 504 FS------------------FELFLSTRPKKALGDRSLWDAAEGALKEALEETGRPWQLN 545 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP------------ 297 A Y D+ L+D+L + ++ F +Y Sbjct: 546 PGDGAFYGPKIDIR---LWDALKRPHQCGTIQLDFQLPIRFNLQYRTQDEAVAASREKAK 602 Query: 298 -------------MSATFKGADGKDHYVQMGS-YGIGAMRVVAAVIESSHDGKGIIWPDS 343 AT + G + ++ G + R + IE Sbjct: 603 DEKSEKRTENGDEPEATKEEEFGVEQPLRPGMARPVIIHRAILGSIERMCAVVIEHTGGK 662 Query: 344 VAPFKISLINIK-AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPL 402 + + I D + L G +V D + + A L + Sbjct: 663 LPFWLSPRQCIVLPISDKVNDYATSVRDVLHSCGYEVGLDVSNNTVNKKIREAQLQQWNY 722 Query: 403 QVIVGSKFVSDSKVEIKHRLTGI-REDMSLEEVINYASHR-FSNNRPVL 449 ++VG K +D V ++ R + +S+E+++ + N++ L Sbjct: 723 LLVVGEKERADKTVTVRDRADPEHQHVLSMEDLLQLFEKQGMPNSKKTL 771 >gi|325269899|ref|ZP_08136509.1| threonine--tRNA ligase [Prevotella multiformis DSM 16608] gi|324987872|gb|EGC19845.1| threonine--tRNA ligase [Prevotella multiformis DSM 16608] Length = 649 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 78/450 (17%), Positives = 151/450 (33%), Gaps = 38/450 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L + KG+ WLP G + + ++R Sbjct: 232 EYLVMLEEAKKRDHRKIGKEMELFM-FSDRVGKGLPIWLPKGTQLRLRLQDLLRRLLRPY 290 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + +L+V SG Y YGK+ + D+ + P + +++ Sbjct: 291 NYQEVITPGIGGKNLYVTSGHYAHYGKDSFQPIHTPEEDEEYMLKPMNCPHHCEVYAYKP 350 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + FR E G+ R R F DA+ F + + Sbjct: 351 RSYKDLPLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPEQVKTE-FETNIDII 409 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L++F G + + D + + + D + + + Sbjct: 410 LKVFKTFGFDNYEAQISLR--------------DPNDKEKYIGSDEVWEESEAAIKQACE 455 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + VE A Y D + D++ ++ ++ F Sbjct: 456 EKGLKARVELGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLPNRF--------KL 504 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D + G++ AV+ G +W + I + Sbjct: 505 EYTAEDNSKKTPVMIHRAPFGSLERFTAVLIEHTAGHFPLW------LTPDQVAILPISE 558 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D K+ A L DD E+IG + +L P VIVG K ++ V ++ Sbjct: 559 KYNDYAFKVKAYLDAHNVRSIMDDRNEKIGRKIRDNELKRVPYMVIVGEKEAAEGLVSMR 618 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNRPVL 449 + G + M++E + ++ L Sbjct: 619 QQGGGEQATMTMEAFAERINAEVADQLKTL 648 >gi|254456980|ref|ZP_05070408.1| threonyl-tRNA synthetase [Campylobacterales bacterium GD 1] gi|207085772|gb|EDZ63056.1| threonyl-tRNA synthetase [Campylobacterales bacterium GD 1] Length = 602 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 67/444 (15%), Positives = 152/444 (34%), Gaps = 40/444 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S + + + RD +++ L T + G WLP G + + +++ + Sbjct: 194 LSAHMTMLAEAEKRDHRKIGNEMNLFT-FREEVGAGFPIWLPAGGRLRARLESLLYKAHR 252 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G + P + +DLW SG Y +YG+ M +D P + ++ + Sbjct: 253 KRGYEPVRGPEMLRSDLWKTSGHYQNYGENM-YFTKIDDIEFGVKPMNCVGHIKVYEDEL 311 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP +++ + R E G+ R REF DA+ F + + + + Sbjct: 312 RSYRDLPIKYFEYGVVHRHEFTGALHGLFRVREFTQDDAHIFCTSEQIEEQIIEVVDFV- 370 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I ++ ++ T + S + + + D Sbjct: 371 ------------------DKIMSTFEFDYKMMVSTKPEKAVGSDEVWEVSTQALKNAMDK 412 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ K+ D++ + ++ F ++ Sbjct: 413 NNLPYEIDEGGGAFYGPKIDI---KITDAIGREWQCGTIQLD----FNLPERF----ELE 461 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G + + + +G+ ++ + + + + I Sbjct: 462 YNGENNEKIQPVMIHRAILGSFERFIGILTEHY------AGEFPMFIAPTQVAIVPIADT 515 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 +++ +L + D + + + A+ P+ VI+G + V V I+ Sbjct: 516 HHGYAKELADKLIDINADSEIYSKNDSLNKRIRTAEKTRVPMLVIIGDEEVEGRTVAIRD 575 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R T + ++S +E + + + Sbjct: 576 RRTREQYNLSEDEFLKLIQTKINE 599 >gi|332296932|ref|YP_004438854.1| Prolyl-tRNA synthetase [Treponema brennaborense DSM 12168] gi|332180035|gb|AEE15723.1| Prolyl-tRNA synthetase [Treponema brennaborense DSM 12168] Length = 615 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 102/254 (40%), Positives = 147/254 (57%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ + L+E P +A IASH+LMLR G+I + G++++LP G ++ V IIREE Sbjct: 1 MKTSETLISTLREVPAEAVIASHQLMLRAGLIRKLGNGLFTYLPFGLRSFRKVENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ + +LW ESGR+D+ G MLR+ +R D+ ++ PT EE +T + R Sbjct: 61 MDAIGALEIKPSVVVPGELWRESGRWDTMGAGMLRIKNRVDQELVVSPTAEEAVTALIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQI K+RDE+RPR+GVMR REF+MKDAYSF E +Y M + Sbjct: 121 ELSSYKQLPIVAYQINTKYRDEIRPRYGVMRGREFMMKDAYSFHADAESLDKTYLAMEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL IP+ A+SG +GG S EF+V + G+ + + Sbjct: 181 YKRIFKRLGLSVIPVSADSGAMGGSGSEEFMVESPIGDDTLILCPKCGYAANTEKAACAP 240 Query: 241 DIISLNSIVEQWTA 254 D + Q A Sbjct: 241 DEVQDKDGKPQVAA 254 Score = 149 bits (377), Expect = 8e-34, Method: Composition-based stats. Identities = 61/174 (35%), Positives = 97/174 (55%), Gaps = 5/174 (2%) Query: 259 TSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 T+DV D P + S +G E+GHIF G KY+ M+ T+ +GK MG Sbjct: 424 TADVRTVVAGDLCPCCGAEFYSKKGNELGHIFKLGYKYTKSMNVTYLDENGKQQVPTMGC 483 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R +A++IE HDG GI+WP S AP+++ ++ +K ++ + +YA L + G Sbjct: 484 YGIGVDRSLASIIEEHHDGNGIVWPMSAAPYQVVIVPVKYEG-TMKEIADSLYAELRQAG 542 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +V DD E+ G +F DL+G P++++VG K + + VE+K R + + Sbjct: 543 IEVLLDDRNERPGVKFKDMDLIGIPVRIVVGEKNLPN--VELKLRSAADSDLVP 594 >gi|328955410|ref|YP_004372743.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Coriobacterium glomerans PW2] gi|328455734|gb|AEB06928.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Coriobacterium glomerans PW2] Length = 643 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 75/440 (17%), Positives = 135/440 (30%), Gaps = 44/440 (10%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD + +L + T M + G+ +LP G + + + + E R G Sbjct: 235 LFRLEEAAKRDHKKLGRELGIFT-MFDEAGPGLPLYLPAGARVIRLMETWLSRELYRRGY 293 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK-------AMIYGPTHEEVMTDIFR 119 E+ P + +D+W SG Y Y M P + I++ Sbjct: 294 QEVITPHIYKSDVWKTSGHYGYYRDNMYFFNINEGTAEEPRLSEFGVKPMNCPGHVLIYK 353 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + + SYR LP +++ +R EL G+ R+R F DA+ F + + + Sbjct: 354 NDLHSYRELPIRYFEFGTVYRHELSGAVNGLFRARGFTQDDAHVFCREDQVIDE-IDSIM 412 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 + I L T + D + Sbjct: 413 DTVDFIMGTFELPYTCEI------------------STRPDKSIGGDDMWEKAERFLAEA 454 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 D I A Y DV K+ DSL + S ++ F ++ L Sbjct: 455 LDRRGIPFEINAGDGAFYGPKIDV---KVKDSLGRTWQCSTIQVD----FNLPERFDLSY 507 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + I R + VIE + + Sbjct: 508 RTADNDELRPWMLHRAIFGSI--DRFLGIVIEHTAGNFPLWLAPVQCAIIPIA------- 558 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D +I + G + E + ++ A A+ P ++VG K + V + Sbjct: 559 DRHLDYACEIKRLIEAAGGRAEVAEHNEPMRAKIARAEAKKVPYMLVVGDKEAAARTVSV 618 Query: 419 KHRLTGIREDMSLEEVINYA 438 + G R M ++E ++ Sbjct: 619 REHSEGDRGSMPIDEFLSII 638 >gi|297243465|ref|ZP_06927397.1| threonyl-tRNA synthetase [Gardnerella vaginalis AMD] gi|296888510|gb|EFH27250.1| threonyl-tRNA synthetase [Gardnerella vaginalis AMD] Length = 660 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 62/457 (13%), Positives = 135/457 (29%), Gaps = 49/457 (10%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD ++ L + + G+ + P G ++ + RE+ + Sbjct: 228 YTTRMEEAAKRDHRKLGQEMDLFS-FPDEIGPGLAVFHPKGAAIINAMEDYSREQHRKHH 286 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEV 113 + P + L+ SG Y M R P + + Sbjct: 287 YSFVQTPHITKGGLYETSGHLQWYKDGMYPPMKLDEERDENGNVTRQGADYYLKPMNCPM 346 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 347 HNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDSHIYCTREQMRDE 406 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 + L + GL + + E + S + + Sbjct: 407 L-KSLLNFVLGLLKDFGLNDFYLELST----------------KDEHKFVGSDEIWEEAT 449 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y + + D++ +VS ++ F Sbjct: 450 NTLAEVAKESGLELVDDPGGAAFYGPKI---SVQARDAIGRTWQVSTIQLD----FNLPE 502 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 ++ + ADG + G++ A++ + G W V + + Sbjct: 503 RF----KLEYIAADGSHQRPVMIHRALFGSIERFFAILLEHYAGAFPAWLAPVQVTGVPV 558 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 +K+ + L + D+ ++ G + A P +I G + V Sbjct: 559 A------DEFAPHLQKLISDLEENMVRCEMDNSDDRFGKKIRNASKSKVPFTLIAGEEDV 612 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 +++ V + R + + + + V Sbjct: 613 NNNAVSFRFRDGSQLNGVPVSQAKEWILSIIKQRVQV 649 >gi|184201256|ref|YP_001855463.1| prolyl-tRNA synthetase [Kocuria rhizophila DC2201] gi|226701301|sp|B2GKS1|SYP_KOCRD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|183581486|dbj|BAG29957.1| prolyl-tRNA synthetase [Kocuria rhizophila DC2201] Length = 606 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 99/240 (41%), Positives = 139/240 (57%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DA++ SHKL++R G I + + GIY+WLPLG L V I+REE Sbjct: 4 RLSSLFLRTLREDPVDADVDSHKLLVRAGYIRRAAPGIYTWLPLGLAVLRRVEGIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ P L + + S R+ YG+ + RL DR + PTHEE+ T + + Sbjct: 64 DAIGAQEVHFPALLPREPYEASNRWTEYGENLFRLQDRKGADYLLAPTHEEMFTLLVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G +Y K +Y Sbjct: 124 YSSYKDLPVMLYQIQTKYRDEARPRAGLLRGREFIMKDSYSFDVDDAGLDDAYAKHRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +RIF RLGL + + A SG +GG S EF+ + GE S + + T + Sbjct: 184 VRIFERLGLPVVAVSATSGAMGGSRSEEFMHPSVVGEDTFVRSAGGYAANVEAVTTVVPE 243 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 5/204 (2%) Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSA 300 + +V + + AT + + D P+ ARG+E+GH+F G KY+ + Sbjct: 397 AHVYDLVAERDFTWDATLEACTVREGDPAPDGSGPLEIARGMEMGHVFQLGRKYAEALGL 456 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +GK V MGSYGIG R +AAV E HD G++WP +++P + ++ + Sbjct: 457 KVLDNNGKLVTVTMGSYGIGVTRALAAVAEFYHDEHGLLWPRNLSPADVHVVATGKGPE- 515 Query: 361 CRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +A E+I A L G V +DD G +F A+LLG P ++VG + ++D +E+K Sbjct: 516 VLEAAEEIVAHLEAAGVSVLFDDRPKVSPGVKFRDAELLGVPTVLVVG-RGLADGVLELK 574 Query: 420 HRLTGIREDMSLEEVINYASHRFS 443 R +G D++ + V+ + Sbjct: 575 DRRSGTSRDIARDRVVAEITAELQ 598 >gi|321252491|ref|XP_003192424.1| threonine-tRNA ligase [Cryptococcus gattii WM276] gi|317458892|gb|ADV20637.1| Threonine-tRNA ligase, putative [Cryptococcus gattii WM276] Length = 771 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 78/452 (17%), Positives = 152/452 (33%), Gaps = 43/452 (9%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ K +L + RD L + S G +LP+G + + + I+EE Sbjct: 349 MKEYKKYL--EEAAKRDHRKIGKDQELFV--FNDLSPGSAFFLPMGMRIYNTLMTFIKEE 404 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + +A+LW SG + +Y ++M +L ++ P + IF + Sbjct: 405 YFKRGFSEVGSPNIFNANLWKTSGHWQNYAEDMFQLK-VDEDQFALKPMNCPGHCLIFDA 463 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SY+ LP F + + R+E G+ R R F+ DA+ F + Y F Sbjct: 464 RERSYKELPLRFAEFGVLHRNEASGALSGLTRVRRFVQDDAHIFCTPDQVEAELY-SAFE 522 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E A+ +V K Sbjct: 523 FLDAVYKPFGFTYKVGLSTRNPKKWMGELELWNKAENTLREVLEQK-------------- 568 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + E+ A Y D +L D+L N + ++ F +++L Sbjct: 569 --VPGNWHVNEEDAAFYGPKLDF---QLTDALKRNWQCGTIQLD----FNLPERFNLKYH 619 Query: 300 ATFKGADGKDH--YVQMGSYGIGAMRVVAAVIESSH-DGKGIIWPDSVAPFKISLINIKA 356 + + DG V + +G++ A+I S + Sbjct: 620 SAEQSPDGTQFARPVMIHRAILGSLERFIAIITESTGGKWPLWLSPRQVVVIPVAKPFT- 678 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + +K+ + G D + + A + ++VG + V Sbjct: 679 ------EYAQKVAKTFQEAGLYAEVDLTDNTLNKKIRNAQTAQWNFIMVVGQDELDAQAV 732 Query: 417 EIKHRLTGIR---EDMSLEEVINYASHRFSNN 445 I++R ++ E + L + + Sbjct: 733 NIRNRDDEVQGREETVVLSRAVEQIVKLKESK 764 >gi|57239615|ref|YP_180751.1| threonyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|58579605|ref|YP_197817.1| threonyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|73919788|sp|Q5H9Z4|SYT_EHRRW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|57161694|emb|CAH58624.1| threonyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|58418231|emb|CAI27435.1| Threonyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] Length = 633 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 84/439 (19%), Positives = 149/439 (33%), Gaps = 41/439 (9%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L L E RD +L L I + G W G + IR++ Sbjct: 229 KLYLNNLIEVEKRDHRKIGKELELF--HIQNEALGQIFWHEKGLIIYRIIENYIRKKLEN 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G IE+ P L S LW +SG +D + + M L++ ++K + P + IF S I+ Sbjct: 287 NGYIEVKTPYLLSKTLWEQSGHWDKFREHMF-LSEIDNKVVAIKPMNCPCHVQIFNSKIR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP + R E G+MR R F DA+ F + + + + Sbjct: 346 SYKDLPLRMAEFGTCHRYESSGALHGLMRVRSFTQDDAHIFCTEDQIIEEALKF-CNLLM 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G K I ++ P S D + Sbjct: 405 EVYEVFGFKDILVKFSDRPEKR-----------------AGSDKIWDKAEEALKASVKAA 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + L D++ + ++ G A + Sbjct: 448 NLNYVLNPGDGAFYGPKLEF---TLKDAIGREWQCGTLQMDFVLPERLG--------AYY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G+DGK H+ + +G + ++ H GK IW V +++ + Sbjct: 497 TGSDGKKHHPIMLHRAILGTIERFIGILIEHHSGKLPIWLAPVQLSILTIT------EDA 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D + + K D E+I + P+ I+G K + V I++ Sbjct: 551 IDYAISLKHKAMKQNIRAEVDITNEKINYKIRSHISKKIPVLWIIGKKEIETESVSIRYL 610 Query: 422 LTGIREDMSLEEVINYASH 440 + + MS ++ + Sbjct: 611 ESKDQHIMSSDKALKTLLS 629 >gi|257055522|ref|YP_003133354.1| threonyl-tRNA synthetase [Saccharomonospora viridis DSM 43017] gi|256585394|gb|ACU96527.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Saccharomonospora viridis DSM 43017] Length = 692 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 63/449 (14%), Positives = 134/449 (29%), Gaps = 50/449 (11%) Query: 7 FLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L + RD +L L + + G+ + P G + R G Sbjct: 258 YLEMLAEAERRDHRKLGAELDLFS-FPEEIGSGLPVFHPKGGVVRKVLEDYSRRRHEEAG 316 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEV 113 ++ P + A L+ SG Y + M + + P + + Sbjct: 317 YEFVNTPHITKAQLFETSGHLHWYREGMYPGMHLDAEYNDDGTVRKPGQDYFLKPMNCPM 376 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKH 172 I+RS +SYR LP ++ +R E G+ R+R F DA+ + + Sbjct: 377 HNLIYRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTVDQMHDE 436 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 + L + GL + + S + + Sbjct: 437 -IKSLLQFVLDLLRDYGLDDFYLELSTRDPEKS----------------IGSDEDWERAT 479 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + + + A YA + + D++ + ++S +++ FG Sbjct: 480 DALRSAAEASGLDLVLDPGGAAFYAPKI---SVQAKDAIGRSWQMSTIQVDLMEPELFG- 535 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 ++ +DG + G++ V+ + G W V I + Sbjct: 536 -------LEYQASDGSKQQPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPI 588 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + + L G V D +++ + P ++ G + V Sbjct: 589 A------DAHVEHLRGVEKALRDRGIRVELDTSDDRMQKKIRTHTTQKVPFLLLAGGRDV 642 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASH 440 V + R + + ++ Sbjct: 643 EAGAVSFRFRDGSQINGVPVATAVDAVVD 671 >gi|67605980|ref|XP_666722.1| threonyl-tRNA synthetase [Cryptosporidium hominis TU502] gi|54657772|gb|EAL36495.1| threonyl-tRNA synthetase [Cryptosporidium hominis] Length = 763 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 81/450 (18%), Positives = 148/450 (32%), Gaps = 40/450 (8%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R +Y + + RD + L L S G WLP G + + + IR E Sbjct: 319 RLDEYLNMLEEAKKRDHRLLGSNLQLF-FFDSNVSPGSCFWLPAGARLYNKLMDFIRSEY 377 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 E+ P + S DLW SG Y +Y + M + D +K P + +F+ Sbjct: 378 RIREFTEVITPNIFSCDLWKTSGHYFAYKENMF-IFDVEEKEWGLKPMNCPGHCVMFKHM 436 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SYR LP + R+E G+ R R F DA+ F + + + Sbjct: 437 NPSYRQLPIRLADFGVLHRNEFSGALNGLTRVRRFQQDDAHIFCTPEQIQEEVFK-ALDF 495 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 I+ +LG F + T + +++ + + D Sbjct: 496 LFFIYGQLGFT------------------FDLFLSTMPKEHLGTEEQWKEAENALKSALD 537 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTKYSLPM 298 + A Y D+ L+D+L + ++ F + + Sbjct: 538 KTGRDWKLNPGDGAFYGPKIDIM---LWDALKRQHQCGTIQLDFQLPIRFNLQYRTDENI 594 Query: 299 SATFKGADGKDHY-----------VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 S + + Q + R + +E + + Sbjct: 595 SEESTNQEQPPSHQNADQNPDNSLKQGYKRPVIIHRAILGSVERMSAVILEHTGGKLPFW 654 Query: 348 KISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIV 406 I + + + + LS+ G DV D I + + LL + +++ Sbjct: 655 LSPRQAIVLSISEKTVEYAKSVERELSRRGFDVSGDYSAATINKKIRESQLLQWNYMLVI 714 Query: 407 GSKFVSDSKVEIKHRLTGI-REDMSLEEVI 435 G D KV ++ R T I +E ++L+++I Sbjct: 715 GENEARDKKVTLRCRDTTIPQELLTLDQLI 744 >gi|326776245|ref|ZP_08235510.1| prolyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1] gi|326656578|gb|EGE41424.1| prolyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1] Length = 567 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 110/263 (41%), Positives = 154/263 (58%), Gaps = 4/263 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE SHKL++R G + +++ GI+SWLPLG+K LDN++ ++REE Sbjct: 6 RMSRLMVKTLRDDPADAETLSHKLLVRAGYVRRNAAGIWSWLPLGKKVLDNISNVVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + SGR++ YG + RL DR + GPTHEE+ T + Sbjct: 66 DAIGAQEVLLPALLPKEPYEASGRWEEYGDLLFRLKDRKGGDYLLGPTHEEIFTQTVKDQ 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR GV+R REF MKD+YSFD T EG HSY +Y Sbjct: 126 CTSYKDLPVMLYQIQTKYRDEARPRSGVLRGREFQMKDSYSFDTTDEGLAHSYALHRAAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF-- 239 ++IF RLGL + A SG +GG S EF+ A GE F D+ +E F Sbjct: 186 IKIFERLGLDHRIVSAVSGAMGGSASEEFLAPAAAGE-DTFADCPHCDYAANTEAVTFAL 244 Query: 240 -DDIISLNSIVEQWTAPYAATSD 261 S + VE+ P T + Sbjct: 245 APVDGSAHGAVEELDTPDTPTIE 267 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 61/186 (32%), Positives = 93/186 (50%), Gaps = 6/186 (3%) Query: 261 DVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 DV + D P+ V R IE+GHIF G KY+ G GK V MGSYG Sbjct: 385 DVVVVEEGDPCPKCGTGLVLDRAIEIGHIFQLGRKYADTFQLDVLGQQGKPVRVTMGSYG 444 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R VAA+ E + D KG+ WP +AP + + A + + + +L+ G Sbjct: 445 IGVSRAVAALTEQTADDKGLCWPREIAPADVH--VVAAGKALQTELALDVSEKLNAAGLR 502 Query: 379 VFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 V DD G G +F ++L+G P ++ G + +D +E+K R TG RE+++++E I Sbjct: 503 VLVDDRPGVSPGVKFTDSELIGVPKILVAGRRS-ADGVLELKDRRTGEREELTVDEAIAR 561 Query: 438 ASHRFS 443 + + Sbjct: 562 LTADLA 567 >gi|45185649|ref|NP_983365.1| ACL039Wp [Ashbya gossypii ATCC 10895] gi|44981367|gb|AAS51189.1| ACL039Wp [Ashbya gossypii ATCC 10895] Length = 724 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 75/431 (17%), Positives = 157/431 (36%), Gaps = 41/431 (9%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E RD + L M ++ S G WLP G + +N+ ++R E + G Sbjct: 309 LKFLEEAAKRDHRKIGREQELF--MFNEMSPGSCFWLPHGTRIYNNLVELLRNEYRKRGY 366 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + ++ LW SG + +Y + M + ++ P + +F+S +SYR Sbjct: 367 EEVITPNMYNSKLWETSGHWANYKENMFTF-EVEKESFGLKPMNCPGHCVMFKSRERSYR 425 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP+ + R+E G+ R R F DA+ F + +F ++ Sbjct: 426 ELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCAQDQIETE-IEGLFDFLKYVY 484 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G EF + T + + + + Sbjct: 485 GVFG------------------FEFKLELSTRPENYVGDLETWNNAEARLESALNKWGGD 526 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y D+ + D+L + + ++ F ++ L Sbjct: 527 WEINEGDGAFYGPKIDIM---ISDALKRWHQCATIQLD----FQLPNRFELEYKGKGNDE 579 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 + + V + +G++ + A++ + WP ++P ++ ++ + +D Sbjct: 580 NAYERPVMIHRALLGSVERMTAILT---EHYAGKWPFWLSPRQVLVVPVGVK---YQDYA 633 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL--- 422 ++I +L G D + + +L + +VG + ++++ V I++R Sbjct: 634 QQIRDKLVGAGFYADADLGSNTLQKKVRTGQMLKYNFIFVVGEQEMNENSVNIRNRDVTD 693 Query: 423 -TGIREDMSLE 432 G E + + Sbjct: 694 LQGKNETVDFD 704 >gi|58617659|ref|YP_196858.1| threonyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel] gi|73919787|sp|Q5FGP1|SYT_EHRRG RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|58417271|emb|CAI28384.1| Threonyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel] Length = 633 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 84/439 (19%), Positives = 149/439 (33%), Gaps = 41/439 (9%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L L E RD +L L I + G W G + IR++ Sbjct: 229 KLYLNNLIEVEKRDHRKIGKELELF--HIQNEALGQIFWHEKGLIIYRIIENYIRKKLEN 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G IE+ P L S LW +SG +D + + M L++ ++K + P + IF S I+ Sbjct: 287 NGYIEVKTPYLLSKTLWEQSGHWDKFREHMF-LSEIDNKVVAIKPMNCPCHVQIFNSKIR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP + R E G+MR R F DA+ F + + + + Sbjct: 346 SYKDLPLRMAEFGTCHRYEASGALHGLMRVRSFTQDDAHIFCTEDQIIEEALKF-CNLLM 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G K I ++ P S D + Sbjct: 405 EVYEVFGFKDILVKFSDRPEKR-----------------AGSDKIWDKAEEALKASVKAA 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y + L D++ + ++ G A + Sbjct: 448 NLNYVLNPGDGAFYGPKLEF---TLKDAIGREWQCGTLQMDFVLPERLG--------AYY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G+DGK H+ + +G + ++ H GK IW V +++ + Sbjct: 497 TGSDGKKHHPIMLHRAILGTIERFIGILIEHHSGKLPIWLAPVQLSILTIT------EDA 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D + + K D E+I + P+ I+G K + V I++ Sbjct: 551 IDYAISLKHKAMKQNIRAEVDITNEKINYKIRSHISKKIPVLWIIGKKEIETESVSIRYL 610 Query: 422 LTGIREDMSLEEVINYASH 440 + + MS ++ + Sbjct: 611 ESKDQHIMSSDKALKTLLS 629 >gi|88856273|ref|ZP_01130933.1| threonyl-tRNA synthetase [marine actinobacterium PHSC20C1] gi|88814592|gb|EAR24454.1| threonyl-tRNA synthetase [marine actinobacterium PHSC20C1] Length = 653 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 68/456 (14%), Positives = 135/456 (29%), Gaps = 48/456 (10%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + +E RD +L L + + G+ + P G + R + G Sbjct: 232 YQARQEEALKRDHRKLGAELDLFS-FPDEIGSGLAVFHPKGGIIRHEMENYSRTRHLQEG 290 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEV 113 ++ P + L+ SG Y M R P + + Sbjct: 291 YSFVNTPHITKEALFETSGHLGWYKDGMFPPMHLDEARNEEGEITRQGADYYLKPMNCPM 350 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 I++S +SYR LP ++ +R+E G+ R R M DA+ F T EG K Sbjct: 351 HILIYKSSGRSYRELPMRLFEFGTVYRNEKSGVIHGLTRVRGLTMDDAHIF-TTKEGMKA 409 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 L + GL + + + + D Sbjct: 410 ELTNTLNFVLSLLRDYGLTDFYLELST----------------KDPEKYVGDDEIWDEAT 453 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y + + D++ ++S ++ F Sbjct: 454 QTLAEVAAESGLELVPDPGGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FNLPE 506 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 ++ L +A + V + G++ V+ + G +W V I + Sbjct: 507 RFDLEYTAA---DGSRQRPVMIHRALFGSIERFFGVLTEHYAGAFPVWLSPVQVVGIPVA 563 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 + + + +L +G D E++ + P Q+I G + + Sbjct: 564 ------EAYEEYLGGVVDQLKALGVRAELDASSERMQKKIRTHTKSKIPFQLIAGEQDQA 617 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 + + R + + + I + S V Sbjct: 618 AGSISFRFRDGSQENGIPIADAIARITDAISTRAQV 653 >gi|299140628|ref|ZP_07033766.1| threonine--tRNA ligase [Prevotella oris C735] gi|298577594|gb|EFI49462.1| threonine--tRNA ligase [Prevotella oris C735] Length = 649 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 75/444 (16%), Positives = 148/444 (33%), Gaps = 36/444 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L + KG+ WLP G + + ++R Sbjct: 232 EYLVMLEEAKKRDHRKIGKEMELFM-FSDRVGKGLPIWLPKGTQLRLRLQELLRSLLRPY 290 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + L+V SG Y YGK+ + D+ + P + +++ Sbjct: 291 NYQEVITPGIGGKSLYVTSGHYAHYGKDAFQPIHTPEEDEEYMLKPMNCPHHCEVYARKP 350 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + FR E G+ R R F DA+ F P+ K + Sbjct: 351 RSYKDLPLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVR-PDQVKAEFETNIDII 409 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L++F + + + + S + + + + Sbjct: 410 LKVFKTFQFDNYEAQISLRD-------------PKDKEKYIGSDEIWEESQNAIREACKE 456 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y D + D++ ++ ++ F Sbjct: 457 KGLVAREEIGEAAFYGPKLDFM---VKDAIGRKWQLGTIQVDYNLPARF--------KLE 505 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + G++ AV+ G +W + I + Sbjct: 506 YTAEDNTKKTPVMIHRAPFGSLERFTAVLIEHTAGHFPLW------LTPDQVAILPISEK 559 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +++ VG DD E+IG + +L P VIVG K ++ V ++ Sbjct: 560 YNDYAKQVSKYFDSVGVRAVIDDRNEKIGRKIRDNELKRIPYMVIVGEKEAAEGLVSMRK 619 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 + G + M +EE N + ++ Sbjct: 620 QGGGEQATMKMEEFANRINAEVAD 643 >gi|281423114|ref|ZP_06254027.1| threonine--tRNA ligase [Prevotella oris F0302] gi|281402450|gb|EFB33281.1| threonine--tRNA ligase [Prevotella oris F0302] Length = 649 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 75/444 (16%), Positives = 148/444 (33%), Gaps = 36/444 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L + KG+ WLP G + + ++R Sbjct: 232 EYLVMLEEAKKRDHRKIGKEMELFM-FSDRVGKGLPIWLPKGTQLRLRLQELLRSLLRPY 290 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + L+V SG Y YGK+ + D+ + P + +++ Sbjct: 291 NYQEVITPGIGGKSLYVTSGHYAHYGKDAFQPIHTPEEDEEYMLKPMNCPHHCEVYARKP 350 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + FR E G+ R R F DA+ F P+ K + Sbjct: 351 RSYKDLPLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVR-PDQVKAEFETNIDII 409 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L++F + + + + S + + + + Sbjct: 410 LKVFKTFQFDNYEAQISLRD-------------PKDKEKYIGSDEIWEESQNAIREACKE 456 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y D + D++ ++ ++ F Sbjct: 457 KGLVAREEIGEAAFYGPKLDFM---VKDAIGRKWQLGTIQVDYNLPARF--------KLE 505 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + G++ AV+ G +W + I + Sbjct: 506 YTAEDNTKKTPVMIHRAPFGSLERFTAVLIEHTAGHFPLW------LTPDQVAILPISEK 559 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +++ VG DD E+IG + +L P VIVG K ++ V ++ Sbjct: 560 YNDYAKQVSKYFDSVGVRAVIDDRNEKIGRKIRDNELKRIPYMVIVGEKEAAEGLVSMRK 619 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 + G + M +EE N + ++ Sbjct: 620 QGGGEQATMKMEEFANRINAEVAD 643 >gi|24583842|ref|NP_723726.1| Threonyl-tRNA synthetase, isoform C [Drosophila melanogaster] gi|28574141|ref|NP_524839.3| Threonyl-tRNA synthetase, isoform B [Drosophila melanogaster] gi|7297922|gb|AAF53167.1| Threonyl-tRNA synthetase, isoform B [Drosophila melanogaster] gi|22946308|gb|AAN10805.1| Threonyl-tRNA synthetase, isoform C [Drosophila melanogaster] Length = 690 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 74/432 (17%), Positives = 147/432 (34%), Gaps = 40/432 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + I+ E + G E+ Sbjct: 285 EEAAKRDHRKIGREQELF--FFHELSPGSCFFQPRGAHIYNTLMGFIKAEYRKRGFQEVI 342 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + +A LW+ SG + Y + M +K P + IF + +S+R LP Sbjct: 343 SPNIYNAKLWMTSGHWQHYAENMFSFEAEKEK-FALKPMNCPGHCLIFDNRNRSWRELPL 401 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + ++ G Sbjct: 402 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAPEQIKSEM-KGCLEFLKYVYTIFG 460 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + P E A+ + ++ Sbjct: 461 FSFQLV-LSTRPDNYLGELEQWNDAEK-----------------ALAESLNEFGMPWKEN 502 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + + ++ F +++L A K Sbjct: 503 PGDGAFYGPKIDI---TIMDALKRAHQCATIQLD----FQLPIRFNLSYIA---DDGEKK 552 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + +G++ + A++ + WP ++P ++ ++ + + + Sbjct: 553 RPVIIHRAILGSVERMIAILT---ENFAGKWPFWLSPRQVMVVPVGP---AYDQYAQSVR 606 Query: 370 ARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L G D D G+ + + A L F ++VG K S + V ++ R + + Sbjct: 607 DQLHDAGFMSEADCDAGDTMNKKIRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGE 666 Query: 429 MSLEEVINYASH 440 +S+ E+I Sbjct: 667 VSVAELITKLQK 678 >gi|163791590|ref|ZP_02185991.1| prolyl-tRNA synthetase [Carnobacterium sp. AT7] gi|159873139|gb|EDP67242.1| prolyl-tRNA synthetase [Carnobacterium sp. AT7] Length = 568 Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 104/251 (41%), Positives = 155/251 (61%), Gaps = 1/251 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L++ P +AE+ SHK++LR G I Q S G+YS+LPL + ++ + I+REE Sbjct: 1 MKQSKLFIPTLRDVPNEAEVLSHKMLLRAGYIRQISSGVYSYLPLANRVIEKLKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P+L +LW ESGRY++YG ++++L DR+ + + GPTHEE T + R Sbjct: 61 FEKIDAVEMLMPSLLPRELWEESGRYETYGDDLMKLQDRHGRDYLLGPTHEEAFTTLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP + YQIQ KFRDE RPR G++R REF+MKDAYSF + E +Y + Sbjct: 121 EITSYKRLPLSLYQIQTKFRDEKRPRSGLLRGREFIMKDAYSFHDSYESLDETYLDFEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R GL + ++G +GG S EF+ ++D GE + S D+ E Sbjct: 181 YTRIFERCGLDFRSIIGDAGAMGGSNSKEFMAISDIGEDTIVYSDS-SDYSANLEMATSF 239 Query: 241 DIISLNSIVEQ 251 + + E+ Sbjct: 240 HMHKKSLENEK 250 Score = 153 bits (387), Expect = 5e-35, Method: Composition-based stats. Identities = 63/227 (27%), Positives = 112/227 (49%), Gaps = 8/227 (3%) Query: 220 QVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA 279 V+ +EN ++L + T D+ + + P+ + V Sbjct: 347 DVYVQDMVNAVAGANENGYHYLNVNLERDSKVET-----YIDLRFVQEGELSPDGQGVLK 401 Query: 280 --RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 +GIE+GHIF GT+YS M+AT +G+ V MG YGIG R+++A+ E +G Sbjct: 402 FAKGIEIGHIFKLGTRYSEAMNATVLDNNGRSIPVVMGCYGIGVTRLLSAITEQQATEEG 461 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 + WP ++PF++ L+ + ++Y L G V DD E++G +F +DL Sbjct: 462 LNWPRHLSPFELHLVPVNMKADDQVTLSNELYETLQHAGFSVLLDDRNERVGVKFKDSDL 521 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +G P+++ VG K ++ VE+K R TG ++ +E+++ + S+ Sbjct: 522 IGLPIRITVGKK-AQENIVELKLRKTGEALEVRADELVDTLNILLSS 567 >gi|332265240|ref|XP_003281636.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic isoform 1 [Nomascus leucogenys] Length = 793 Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 73/447 (16%), Positives = 151/447 (33%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + + + +E RD + L H S G +LP G + + IREE Sbjct: 376 KMMRNWEKSQEEAKNRDHRKIGKEQELF--FFHDLSPGSCFFLPRGAFIYNTLTDFIREE 433 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ E+ P + ++ LW SG + Y + M D P + +F Sbjct: 434 YHKRDFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIEKDT-FALKPMNCPGHCLMFAH 492 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R +P F + R+EL G+ R R F DA+ F + + Sbjct: 493 RPRSWREMPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQ-IEEEIKGCLQ 551 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G F + T + + + Sbjct: 552 FLQSVYSTFGFS------------------FQLNLSTRPENFLGEIEMWNEAEKQLQSSL 593 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D + A Y D+ K+ D++ + + ++ F +++L Sbjct: 594 MDFGEPWKMNPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPVRFNLTYV 646 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K V + +G++ + A++ + G WP ++P ++ +I + Sbjct: 647 SK--DGDDKKRPVIIHRAILGSVERMIAILS---ENYGGKWPFWLSPHQVMVIPVGP--- 698 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C ++ + + G D D + + A L + ++VG K ++ V + Sbjct: 699 ACEKYALQVSSEFFEEGFMADVDLDHNCTLNKKIRNAQLAQYNFILVVGEKEKVNNAVNV 758 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R I ++ + I+ + Sbjct: 759 RTRDNKIHGEILVTSAIDKLKNLKKTR 785 >gi|134102383|ref|YP_001108044.1| prolyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] gi|133915006|emb|CAM05119.1| prolyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 574 Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 96/217 (44%), Positives = 134/217 (61%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 FL L+E+P DAE+ SH+L++R G + + GIYSWLPLG + L N+ I+R+E + G Sbjct: 1 MFLRTLREDPADAEVPSHRLLVRAGYVRRIGPGIYSWLPLGLRVLRNIEEIVRQEMDAIG 60 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 A E+ P L + + + R+ YG + RL DR + GPTHEE+ T + SY Sbjct: 61 AQEIHFPALLPKEPYEATNRWTEYGPNLFRLKDRKGGDYLLGPTHEELFTLTVKGEYSSY 120 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 ++ P YQIQ K+RDE RPR G++R REF+MKD+YSFDL EG +SY +Y+RIF Sbjct: 121 KDYPVILYQIQTKYRDEERPRAGILRGREFVMKDSYSFDLDDEGLTNSYRLHRDAYIRIF 180 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 R+GL+ + + A SG +GG S EF+ A TGE Sbjct: 181 DRVGLRYVIVAATSGAMGGSASEEFLAEAPTGEDTFV 217 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 68/188 (36%), Positives = 102/188 (54%), Gaps = 4/188 (2%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ + V+ARGIE+GHIF G KY+ S G DGK + MG Sbjct: 388 GTIEAAEVREGDPSPDGEGTLVAARGIEIGHIFQLGRKYADAFSLDALGQDGKPKRITMG 447 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R+VAA+ E SHD G++WP VAP + + I D+ R+ E++ A L Sbjct: 448 SYGVGVSRMVAAIAEQSHDELGLVWPREVAPADVH-VVIAGKDESVREGAERLAADLDAA 506 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G V DD G +FA A+L+G P ++VG K ++ VE+K R +G RE++ ++ + Sbjct: 507 GVRVLLDDRNASPGVKFADAELVGVPTILVVG-KGLAKGVVEVKDRRSGDREEVPVDGAV 565 Query: 436 NYASHRFS 443 + Sbjct: 566 EHLVSTIR 573 >gi|224062355|ref|XP_002195014.1| PREDICTED: similar to probable threonyl-tRNA synthetase 2, cytoplasmic [Taeniopygia guttata] Length = 719 Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 74/444 (16%), Positives = 153/444 (34%), Gaps = 44/444 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + I +E RD + L H S G +LP G + + IR E Sbjct: 302 KMMKEWEKIQEEAKNRDHRKIGKEQELF--FFHDLSPGSCFFLPRGAFLYNTLVDFIRGE 359 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R E+ P + ++ LW SG + Y + M + P + +F Sbjct: 360 YRRRNFTEVVSPNVFNSKLWEASGHWQHYSENMFSFEVEKET-FAIKPMNCPGHCLMFAH 418 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + + Sbjct: 419 RPRSWRELPLRLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTMEQ-IEEEIKDCLD 477 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G F + T + D Sbjct: 478 FLKSVYAVFGFT------------------FQLHLSTRPENYLGDLEIWDHAEKQLQNSL 519 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ ++ A Y D+ K+ D++ + + ++ F ++ + Sbjct: 520 NNFGEQWNLNPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRF----N 568 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ G DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 569 LTYVGKDGDDKKRPVIIHRAILGSVERMIAILA---ENYGGKWPFWLSPRQVMVVPVGPA 625 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + +++ + + G D D + + A L + ++VG K +++ V Sbjct: 626 SE---QYAQQVCDQFFEAGFMSDVDLDQSCTLNKKIRNAQLAQYNFILVVGEKEKANNAV 682 Query: 417 EIKHRLTGIREDMSLEEVINYASH 440 ++ R + ++S+ I Sbjct: 683 NVRTRDNKVHGEISVSSTIEKLKK 706 >gi|315123806|ref|YP_004065810.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315017528|gb|ADT65621.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 457 Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 71/444 (15%), Positives = 150/444 (33%), Gaps = 40/444 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y I + RD +L L T + G+ WL G + + ++ + Sbjct: 49 LKEYLTIIEEAKKRDHRKLGTELKLFT-FDDEIGGGLPIWLSNGARLRSKLEHMLYKIHR 107 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P L AD W SG Y +Y + M +++ P + I++S + Sbjct: 108 LRGYEPVRGPELLKADAWKISGHYANYKENM-YFTQIDEQEYGIKPMNCVGHIKIYQSDV 166 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP F++ + R E G+ R REF DA+ F + P K ++ Sbjct: 167 RSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCM-PSQIKEQVLEILAFV 225 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + T + + + + ++ Sbjct: 226 DNLMKLFDFSYEMEI------------------STKPEKAIGDDEIWEIATKALKEALNE 267 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ K+ D+L + ++ F +++ Sbjct: 268 QGLKYGIDEGGGAFYGPKIDI---KITDALKRKWQCGTVQVD----FNLPSRF----KLE 316 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +D + + +G+ ++ + + + I + Sbjct: 317 YTDSDNEKKQPVMLHRAILGSFERFIGILTEHC------AGEFPFFIAPTAVGIVPIGEA 370 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ++I L ++ D + E + + +A+ P+ +++G V V ++ Sbjct: 371 HIAYAKEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVVKRSVALRD 430 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R ++++SL+E I + S Sbjct: 431 RRAKEQKNLSLDEFIKLVKEKMSE 454 >gi|225021160|ref|ZP_03710352.1| hypothetical protein CORMATOL_01172 [Corynebacterium matruchotii ATCC 33806] gi|224946067|gb|EEG27276.1| hypothetical protein CORMATOL_01172 [Corynebacterium matruchotii ATCC 33806] Length = 584 Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 102/282 (36%), Positives = 150/282 (53%), Gaps = 5/282 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAE+ SHKL++R G I + + G+Y+WLPLG + L + ++REE Sbjct: 4 RLSSLFLRTLREDPADAEVPSHKLLVRAGYIRRAAPGVYTWLPLGLRTLRKIEKVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ P L S + + ++ R+ YG + RL DR M+ GPTHEE+ + Sbjct: 64 DHIGAQELLFPALLSREPYEQTRRWTEYGDNLFRLKDRKGNDMLLGPTHEEMFARQVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R REF+MKD+YSFD+T G + SY +Y Sbjct: 124 FTSYKDFPVTLYQIQTKYRDEERPRAGILRGREFVMKDSYSFDMTDAGLEQSYLAHRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 IF RL L+ +A SG +GG S EF+ ++ GE F D+ E Sbjct: 184 QAIFDRLNLEYAICKATSGAMGGSASEEFLAISPNGE-DTFVRATEGDYAANVEAVTT-- 240 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 + + P A + +L + + I+ Sbjct: 241 --QPGTTRDFTNLPEAVIHETPESTTIAALVDWANGAGITID 280 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 6/188 (3%) Query: 260 SDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +V + D P+ + V RGIE+GHIF G KY+ GK MGSY Sbjct: 400 VEVAEIREGDPAPDGQGVLTLERGIEIGHIFQLGRKYTEVFDVQILDEHGKRAIPTMGSY 459 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+V + E HD G+ WP VAP+++ ++ D+ A + I +L G Sbjct: 460 GIGVSRLVGVIAEQHHDDNGLNWPVEVAPYQVHVVVAN-KDKAALAAGDDIVVQLDAAGV 518 Query: 378 DVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V +DD G +F ++LLG P V++G + S+ VE++ R G ++ ++++ Sbjct: 519 EVLFDDRPKVSPGVKFKDSELLGMPYIVVLG-RSFSNGIVELRIRG-GETLEVPATDIVD 576 Query: 437 YASHRFSN 444 + Sbjct: 577 TVTKLIHK 584 >gi|301168478|emb|CBW28068.1| proline tRNA synthetase [Bacteriovorax marinus SJ] Length = 573 Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 109/284 (38%), Positives = 159/284 (55%), Gaps = 3/284 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S F +E P DAEI SH+LM+R G+IH+ G+YS+LP G +++ V IIREE Sbjct: 1 MKLSTGFWQTYKEVPADAEIPSHQLMVRAGLIHKMGSGLYSYLPFGYRSIRKVEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G E+ + + +LW ESGR+D+ G +ML++ D+ + + PT+EE +TDIFR Sbjct: 61 LDKAGCHEILMSMVTPGELWQESGRWDAMGDQMLKVKDKGGRDLCLSPTNEEAVTDIFRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+NLP T YQI KFRDELRPRFG+MR REF MKD YSF + + Y+++F + Sbjct: 121 TIKSYKNLPVTLYQINTKFRDELRPRFGLMRGREFTMKDGYSFHIDKDSLDEVYDRIFKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLS--HEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 Y IF R GL+ + A++G + HEF V+A+TGE +V + + E Sbjct: 181 YEAIFTRAGLEFSAVEADAGAMADSDQKTHEFQVIANTGEDEVIYC-NETGYAANIEKAQ 239 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 + + E + D L K S + + Sbjct: 240 TKRGKLQFDLSASEVTRVETPNMGTIESVCDFLKVPKEQSIKSL 283 Score = 147 bits (372), Expect = 3e-33, Method: Composition-based stats. Identities = 64/167 (38%), Positives = 89/167 (53%), Gaps = 2/167 (1%) Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 RGIEVGHIF G KY+ M T ++GK MG YGIG RVVAA +E HD KG Sbjct: 407 IRRGIEVGHIFQLGDKYTKAMGTTVLDSNGKAMNPLMGCYGIGVTRVVAAAVEQHHDDKG 466 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 I+WP ++AP+ + I ++ EKIY + + +V +DD G +F ADL Sbjct: 467 IVWPMALAPYHVYFAEIT-KSAENKELAEKIYNEILEANIEVVFDDRKAGPGFKFKDADL 525 Query: 398 LGFPLQVIVGSKF-VSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 LG PLQ++ G + D +EI+ R TG + E+V++ Sbjct: 526 LGLPLQLVFGERDFKKDGMLEIRIRKTGESLKVKPEDVVSKLQELIK 572 >gi|315453307|ref|YP_004073577.1| threonyl-tRNA synthetase [Helicobacter felis ATCC 49179] gi|315132359|emb|CBY82987.1| threonyl-tRNA synthetase [Helicobacter felis ATCC 49179] Length = 612 Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 71/441 (16%), Positives = 153/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + G+ WLP G + + ++ R+G Sbjct: 207 YLTQLEEAKKRDHRKLGQELGLFR-FDEEVGAGLPIWLPNGMRLRKRIEDLLSVALLRSG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + + LW SG Y++Y + M ++ P + +++ ++SY Sbjct: 266 YEPVRGPEILKSSLWKISGHYENYKENM-YFTTIDEVEYGIKPMNCVGHIKVYQHALRSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F Sbjct: 325 RDLPLRFYEYGVVHRHEQSGVLHGLLRVREFTQDDAHIFCR------------------- 365 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F ++ + + A + + G ++ + T T+ S + + + ++ Sbjct: 366 FDQIKAEVQAILAFTKRVMGAFGFDYEMELSTKPTKYIGSDEVWEQATSALKEALEEQGV 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D+ K+ D++ + +++ F ++ Sbjct: 426 PFKVDEGGGAFYGPKIDI---KITDAIRRKWQCGTVQVDMNLPARF--------HLSYAS 474 Query: 305 AD-GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ AV+ + G + + + D Sbjct: 475 EQDSPEMPVMIHRAILGSFERFIAVLTEHYGGNFPFF------IAPVQVALVPISADQHD 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + +L G + E + + + PL ++G+K ++ + I+ R Sbjct: 529 YAQDLCTQLRHAGIFAEVANKNESLAKRIRTLEKQKVPLIAVIGAKETQENALAIRDRAL 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 G + M +E IN + Sbjct: 589 GEQYTMDSKEFINMCQEKMQE 609 >gi|329120957|ref|ZP_08249588.1| proline--tRNA ligase [Dialister micraerophilus DSM 19965] gi|327471119|gb|EGF16573.1| proline--tRNA ligase [Dialister micraerophilus DSM 19965] Length = 574 Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 111/273 (40%), Positives = 162/273 (59%), Gaps = 2/273 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + P L+E P +A + SHK ML+ GMI + S G YS+LPL +++ + II EE Sbjct: 1 MKASKLYAPTLREIPSEAVVISHKYMLKAGMIRKISSGFYSYLPLAWRSIKKIENIIHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + + E+ + Q A++W ++GR+D YG+EM RL DR+++ PTHEE++T + Sbjct: 61 MAKIESQEILMSIAQPAEIWQQTGRWDVYGEEMFRLKDRHERDYCLAPTHEELVTTLVHI 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY+ LP + YQIQ K+RDE RPRFG+MRSREF+MKDAY+FD+ EG Y+ M+ + Sbjct: 121 DTFSYKQLPVSLYQIQNKYRDEKRPRFGLMRSREFIMKDAYTFDVDEEGLDKQYHDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF + GL + A+SG IGG SHEF VLA+ GE + + +F E D Sbjct: 181 YTNIFTKCGLNFRTVIADSGAIGGSSSHEFEVLAEAGEADIVY-EVDGEFAANVEAVIPD 239 Query: 241 DII-SLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 I +L + +E+ + + F LP Sbjct: 240 TISCNLKNDLEKEIVATPGQETIEDVCKFLGLP 272 Score = 147 bits (370), Expect = 5e-33, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 101/189 (53%) Query: 258 ATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 T + ++ + +GIEVG +F GTKYS ++ T+ +GK + MG Y Sbjct: 382 ETIRLIDKNDVSPWTGKEIEFKKGIEVGQVFKLGTKYSESLNCTYLDKNGKSKPMVMGCY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R +AA IE +HD GIIW S+AP+++ +I + E++Y +SK Sbjct: 442 GIGVTRTMAASIEQNHDKDGIIWAVSIAPYEVVIIPANNKNSEIMKVAEELYRNMSKENN 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 ++ +DD E+ G +F ADL+G+P++V +G K+ + KVEIK R TG ++ ++ Sbjct: 502 EIVFDDRNERAGIKFKDADLIGYPIRVTIGKKWEENGKVEIKIRRTGEVIEIDYKDCKAK 561 Query: 438 ASHRFSNNR 446 + R Sbjct: 562 VESILDDLR 570 >gi|328710126|ref|XP_001950747.2| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Acyrthosiphon pisum] Length = 714 Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 72/434 (16%), Positives = 140/434 (32%), Gaps = 42/434 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + I+ E + G E+ Sbjct: 308 EEAARRDHRKIGREQELF--FFHELSPGSCFFQPKGAHIYNTLIEFIKSEYRKRGFQEVV 365 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + + LW SG + Y + M D + P + +F +S+R LP Sbjct: 366 SPNIYNVKLWQTSGHWAHYAENMFSF-DVEKETYALKPMNCPGHCLMFDHRNRSWRELPL 424 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F T + + ++ G Sbjct: 425 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTTDQIGQEM-MSSLDFLRHVYTVFG 483 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 F + T + + + + ++ Sbjct: 484 FT------------------FHLRLSTRPEKYLGELEMWENAEKQLADSLNSFGEPWTLN 525 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + + ++ F ++ + F G+ Sbjct: 526 PGDGAFYGPKIDI---TISDALKRQHQCATIQLD----FQLPIRF----NLNFISESGEK 574 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + G++ + A++ S GK W I + + EK+ Sbjct: 575 KRPVIIHRAIFGSVERMIAILTESFAGKWPFWLSPRQAIVIPVGP------QFDEYSEKV 628 Query: 369 YARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + + G D D G+ + + A L + ++VG K + + V ++ R + Sbjct: 629 KKEIYEAGFMCDVDVDHGDTLNKKIRNAQLAQYNFILVVGDKEKTANTVNVRTRDNNVHG 688 Query: 428 DMSLEEVINYASHR 441 + S+EE I Sbjct: 689 EFSIEETIQRLQKL 702 >gi|113954220|ref|YP_731070.1| threonyl-tRNA synthetase [Synechococcus sp. CC9311] gi|123031674|sp|Q0I902|SYT_SYNS3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|113881571|gb|ABI46529.1| threonyl-tRNA synthetase [Synechococcus sp. CC9311] Length = 617 Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 69/448 (15%), Positives = 137/448 (30%), Gaps = 36/448 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S++ + RD L L + + + G+ W P G + + R+ Sbjct: 195 LSEHKRRKEEALRRDHRRLGKDLDLFS-IEDEAGAGLVFWHPRGARMRLLIEDFWRQAHF 253 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P + LW SG D Y + M + +++ P + + S + Sbjct: 254 EGGYELLYTPHVADISLWKTSGHLDFYAESMFGPMEVDERQYQLKPMNCPFHVLTYASKL 313 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR LP + ++ +R E G+MR R F DA+ F L + S + Sbjct: 314 RSYRELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDE-----ILRI 368 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L + R+ + + T + + Sbjct: 369 LNLTERILSTFDFSN-------------YEINLSTKPDKAIGDDAVWELATKGLIEALKR 415 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ K+ D++ + S ++ F ++ L A Sbjct: 416 KGWAYKIDEGGGAFYGPKIDL---KIEDAIGRMWQCSTIQLD----FNLPERFELDYIAA 468 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + + + R + E+ Sbjct: 469 --DGSKQRPIMIHRAIFGSLERFFGIMTENYAGDFPFWLAPEQIRLLPVT-------DEV 519 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 E+ +L G D G+++G + + + P+ ++G+K ++ R Sbjct: 520 LGYAEEFQNQLKAAGIRASIDRSGDRLGKLIRIGEKMKIPVLAVIGAKEAEQGAASLRSR 579 Query: 422 LTGIREDMSLEEVINYASHRFSNNRPVL 449 G ++ E +I A + + L Sbjct: 580 RDGDLGVITKERLIATAQSANQDRKASL 607 >gi|163840754|ref|YP_001625159.1| threonyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209] gi|162954230|gb|ABY23745.1| threonyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209] Length = 700 Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 67/451 (14%), Positives = 128/451 (28%), Gaps = 49/451 (10%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 I + RD +L L + + G+ + P G + R G Sbjct: 270 RIAEAERRDHRKLGTELDLFS-FPDELGSGLPVFHPKGGIIRKEMEDYSRARHIAAGYEF 328 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTD 116 + P + A+L+ SG D Y M + + P + + Sbjct: 329 VYTPHITKANLYEVSGHLDWYRDGMFPPMHVDEELNEDGTVRKPGQDYYLKPMNCPMHNL 388 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IFRS +SYR LP ++ +R E G+ R R DA+ + + Sbjct: 389 IFRSRGRSYRELPLRLFEFGSVYRYEKSGVIHGLTRVRGMTQDDAHIYCTRDQMKDEL-T 447 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 L + GL+ + + + S D + + Sbjct: 448 STLNFVLGLLKDYGLEDFYLELST----------------KDPEKYVGSDDVWEEATRTL 491 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 + A Y + + D++ ++S ++ F ++ Sbjct: 492 AEVAAESGLDLVPDPGGAAFYGPKI---SVQARDAIGRTWQMSTIQLD----FNLPERF- 543 Query: 296 LPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 ++ ADG + G++ AV+ + G W V I + Sbjct: 544 ---ELEYQAADGSRQRPVMIHRALFGSVERFMAVLTEHYAGAFPAWLAPVQVVGIPVA-- 598 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 + D + +L G D ++ + A P +I G V Sbjct: 599 ----ETFNDYMADVVGQLRSAGVLAELDISSDRFPKKIRTASKEKIPFVLIAGGDDVEAG 654 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + R + + E + + Sbjct: 655 AVSFRFRDGSQDNGVPVAEAVQRIVRAVQDR 685 >gi|298252757|ref|ZP_06976551.1| threonyl-tRNA synthetase [Gardnerella vaginalis 5-1] gi|297533121|gb|EFH72005.1| threonyl-tRNA synthetase [Gardnerella vaginalis 5-1] Length = 660 Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 62/457 (13%), Positives = 135/457 (29%), Gaps = 49/457 (10%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD ++ L + + G+ + P G ++ + RE+ + Sbjct: 228 YTTRMEEAAKRDHRKLGQEMDLFS-FPDEIGPGLAVFHPKGAAIINAMEDYSREQHRKHH 286 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEV 113 + P + L+ SG Y M R P + + Sbjct: 287 YSFVQTPHITKGGLYETSGHLQWYKDGMYPPMKLDEERDENGNVTRQGADYYLKPMNCPM 346 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 347 HNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDSHIYCTREQMRDE 406 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 + L + GL + + E + S + + Sbjct: 407 L-KSLLNFVLGLLKDFGLNDFYLELST----------------KDEHKFVGSDEIWEEAT 449 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y + + D++ +VS ++ F Sbjct: 450 NTLAEVAKESGLELVDDPGGAAFYGPKI---SVQARDAIGRTWQVSTIQLD----FNLPE 502 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 ++ + ADG + G++ A++ + G W V + + Sbjct: 503 RF----KLEYIAADGSHQRPVMIHRALFGSIERFFAILLEHYAGAFPAWLAPVQVTGVPV 558 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 +K+ + L + D+ ++ G + A P +I G + V Sbjct: 559 A------DEFAPHLQKLISDLEENMVRCEMDNSDDRFGKKIRNASKSKVPFTLIAGEEDV 612 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 +++ V + R + + + + V Sbjct: 613 NNNAVSFRFRDGSQLNGVPVSQAKEWILSIIKQRVQV 649 >gi|241895744|ref|ZP_04783040.1| prolyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313] gi|241870787|gb|EER74538.1| prolyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313] Length = 570 Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 114/235 (48%), Positives = 155/235 (65%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L+E P DAE+ SH++MLR G + Q + G+Y++LPL Q+ L+ +NAIIREE Sbjct: 1 MKQSKVFIPTLRETPADAEVISHQMMLRAGYVRQVTAGVYAYLPLAQRVLNKINAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + AIEM+ P L A+LW ESGRY++YG + +L +R+ + MI GPTHEE MT + R Sbjct: 61 MEKIDAIEMTAPVLLPAELWEESGRYETYGPNLFKLKNRHGRDMILGPTHEETMTTLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ K RDE RPRFGV+R REF+MKDAYSF + G +Y KM + Sbjct: 121 DIKSYKRLPLTLYQIQTKLRDEDRPRFGVLRGREFIMKDAYSFSIDEAGLDDAYKKMETA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y+ IF R+GL + ++G +GG S EF A GE + S ++ E Sbjct: 181 YVNIFDRVGLNYRVIVGDAGAMGGSDSKEFSAPAAAGEDTIAYSD-ESEYAANLE 234 Score = 154 bits (388), Expect = 4e-35, Method: Composition-based stats. Identities = 74/231 (32%), Positives = 115/231 (49%), Gaps = 4/231 (1%) Query: 218 ETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK-- 275 E ++ + D + LN+ V++ +DV + D +NK Sbjct: 341 EVKIIADEWVTDMANIVVGGNEAGFHYLNANVDR-DFRIDEVADVRIAREGDPAIDNKGH 399 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 +GIEVGHIF GT+YS M A A+G+ V MGSYGIG R++AA+ E + D Sbjct: 400 LQFTKGIEVGHIFKLGTRYSKSMGAQVLDANGRQADVIMGSYGIGVSRLLAAIAEQNADE 459 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 G+ WP +VAP+ + L+ IK D+ + + L G +V DD E+ G +FA + Sbjct: 460 HGLSWPAAVAPWDVHLVPIKYKDETQAKLTDDLNESLVAAGYEVLVDDRNERPGVKFADS 519 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 DL+G P++V VG K SD VE+K R ++ +E+++ N+ Sbjct: 520 DLIGLPVRVTVGKK-ASDGIVEVKLRQADEAIEVRADELVSTLQVFLDGNK 569 >gi|262202081|ref|YP_003273289.1| prolyl-tRNA synthetase [Gordonia bronchialis DSM 43247] gi|262085428|gb|ACY21396.1| prolyl-tRNA synthetase [Gordonia bronchialis DSM 43247] Length = 576 Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 105/270 (38%), Positives = 155/270 (57%), Gaps = 7/270 (2%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S FL L+++P DAE+ SHKL++R G + + + G+Y+WLPLG + L + ++REE + Sbjct: 1 MSTLFLRTLRDDPADAEVPSHKLLVRGGYVRRAAPGVYTWLPLGLRVLKAIENVVREEMD 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+ +P L D + +GR+ YG + RL DR M+ GPTHEE+ ++ + Sbjct: 61 AIGAQEILLPALLPRDPYETTGRWTEYGDALFRLKDRKGADMLLGPTHEELFANLVKGEY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP YQIQ K+RDE RPR G++R REF+MKDAYSFDL +G K SY +Y Sbjct: 121 SSYKDLPVILYQIQTKYRDEERPRAGILRGREFVMKDAYSFDLDDDGLKVSYQAHREAYQ 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGET-QVFCSKDFMDFPIPSENTDFDD 241 R+F RLG+K + + A SG +GG S EF+ ++ GE V C + + + T + Sbjct: 181 RLFARLGVKYVIVAATSGAMGGSASEEFLAESEVGEDTFVRCLESGYAANVEAVITPAPE 240 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + P A T D + D+L Sbjct: 241 ------PIPFDGLPVATTYDTGDTPTIDTL 264 Score = 147 bits (371), Expect = 4e-33, Method: Composition-based stats. Identities = 64/183 (34%), Positives = 93/183 (50%), Gaps = 4/183 (2%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ K VSA+GIE+GHIF G KY+ G GK + MG Sbjct: 390 GTIEAAEVRDGDPSPDGKGPLVSAKGIEIGHIFQLGQKYTDAFEVDVLGESGKPVRLTMG 449 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R+VA + E HD KG+ WP VAPF + L+ D A E + L Sbjct: 450 SYGVGVSRLVAVIAEQCHDDKGLRWPREVAPFAVHLVIANKDDAAVTGAGE-LAEDLDAA 508 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G V DD G +F A+LLG P V+VG + ++ +EI+ R TG +++++ + Sbjct: 509 GVSVLLDDRKASPGVKFKDAELLGMPTVVVVG-RGYANGTIEIRDRFTGETTEVAVDSAV 567 Query: 436 NYA 438 + Sbjct: 568 DAI 570 >gi|283783304|ref|YP_003374058.1| threonine--tRNA ligase [Gardnerella vaginalis 409-05] gi|283441631|gb|ADB14097.1| threonine--tRNA ligase [Gardnerella vaginalis 409-05] Length = 676 Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 62/457 (13%), Positives = 135/457 (29%), Gaps = 49/457 (10%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD ++ L + + G+ + P G ++ + RE+ + Sbjct: 244 YTTRMEEAAKRDHRKLGQEMDLFS-FPDEIGPGLAVFHPKGAAIINAMEDYSREQHRKHH 302 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEV 113 + P + L+ SG Y M R P + + Sbjct: 303 YSFVQTPHITKGGLYETSGHLQWYKDGMYPPMKLDEERDENGNVTRQGADYYLKPMNCPM 362 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 363 HNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDSHIYCTREQMRDE 422 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 + L + GL + + E + S + + Sbjct: 423 L-KSLLNFVLGLLKDFGLNDFYLELST----------------KDEHKFVGSDEIWEEAT 465 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y + + D++ +VS ++ F Sbjct: 466 NTLAEVAKESGLELVDDPGGAAFYGPKI---SVQARDAIGRTWQVSTIQLD----FNLPE 518 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 ++ + ADG + G++ A++ + G W V + + Sbjct: 519 RF----KLEYIAADGSHQRPVMIHRALFGSIERFFAILLEHYAGAFPAWLAPVQVTGVPV 574 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 +K+ + L + D+ ++ G + A P +I G + V Sbjct: 575 A------DEFAPHLQKLISDLEENMVRCEMDNSDDRFGKKIRNASKSKVPFTLIAGEEDV 628 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 +++ V + R + + + + V Sbjct: 629 NNNAVSFRFRDGSQLNGVPVSQAKEWILSIIKQRVQV 665 >gi|182435611|ref|YP_001823330.1| prolyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC 13350] gi|226701340|sp|B1VYP2|SYP_STRGG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|178464127|dbj|BAG18647.1| putative prolyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 567 Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 110/263 (41%), Positives = 154/263 (58%), Gaps = 4/263 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE SHKL++R G + +++ GI+SWLPLG+K LDN++ ++REE Sbjct: 6 RMSRLMVKTLRDDPADAETLSHKLLVRAGYVRRNAAGIWSWLPLGKKVLDNISNVVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + SGR++ YG + RL DR + GPTHEE+ T + Sbjct: 66 DAIGAQEVLLPALLPKEPYEASGRWEEYGDLLFRLKDRKGGDYLLGPTHEEIFTQTVKDQ 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR GV+R REF MKD+YSFD T EG HSY +Y Sbjct: 126 CTSYKDLPVMLYQIQTKYRDEARPRSGVLRGREFQMKDSYSFDTTDEGLAHSYALHRAAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF-- 239 ++IF RLGL + A SG +GG S EF+ A GE F D+ +E F Sbjct: 186 IKIFERLGLDHRIVSAVSGAMGGSASEEFLAPAAAGE-DTFADCPNCDYAANTEAVTFAL 244 Query: 240 -DDIISLNSIVEQWTAPYAATSD 261 S + VE+ P T + Sbjct: 245 APVDGSAHGAVEELDTPDTPTIE 267 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 61/186 (32%), Positives = 93/186 (50%), Gaps = 6/186 (3%) Query: 261 DVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 DV + D P+ V R IE+GHIF G KY+ G GK V MGSYG Sbjct: 385 DVVVVEEGDPCPKCGTGLVLDRAIEIGHIFQLGRKYADTFQLDVLGQQGKPVRVTMGSYG 444 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R VAA+ E + D KG+ WP +AP + + A + + + +L+ G Sbjct: 445 IGVSRAVAALTEQTADDKGLCWPREIAPADVH--VVAAGKALQTELALDVSEKLNAAGLR 502 Query: 379 VFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 V DD G G +F ++L+G P ++ G + +D +E+K R TG RE+++++E I Sbjct: 503 VLVDDRPGVSPGVKFTDSELIGVPKILVAGRRS-ADGVLELKDRRTGEREELTVDEAIAR 561 Query: 438 ASHRFS 443 + + Sbjct: 562 LTADLA 567 >gi|229817631|ref|ZP_04447913.1| hypothetical protein BIFANG_02901 [Bifidobacterium angulatum DSM 20098] gi|229785420|gb|EEP21534.1| hypothetical protein BIFANG_02901 [Bifidobacterium angulatum DSM 20098] Length = 677 Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 66/459 (14%), Positives = 134/459 (29%), Gaps = 50/459 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L+E RD ++ L + + G+ + P G ++ + RE + Sbjct: 242 KAYQTRLEEAAKRDHRKLGAEMDLFS-FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRK 300 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHE 111 + P + L+ SG Y M + P + Sbjct: 301 HHYSFVQTPHITKGGLYETSGHLHWYKDSMYPPMRLDEEKDENGNVTKQGFDYYLKPMNC 360 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 361 PMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMK 420 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L + GL + + + S + + Sbjct: 421 DEL-KNLLTFVLGLLKDFGLDDFYLELST----------------KDPHKYVGSDEIWEE 463 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + D A Y + + D++ +VS ++ F Sbjct: 464 ATNTLAEVAKDSGLELVDDPCGAAFYGPKI---SVQARDAIGRTWQVSTIQLD----FNL 516 Query: 291 GTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 ++ + ADG + G++ AV+ + G W V + Sbjct: 517 PERF----QLEYIAADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGV 572 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 + +K A L + D ++ G + A P +IVG + Sbjct: 573 PVA------DEFAPHLQKFIASLEEETVRCEIDLSDDRFGKKIRNASKSKAPFILIVGEE 626 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 ++++ V + R + ++E V Sbjct: 627 DMNNNAVSFRFRDGSQLNGVPVDEAKANIMKVIKKRVQV 665 >gi|206895814|ref|YP_002247094.1| prolyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265] gi|226699133|sp|B5Y8J7|SYP_COPPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|206738431|gb|ACI17509.1| prolyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265] Length = 558 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 105/232 (45%), Positives = 150/232 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK+F L+E+P+DAE SHKL++R MI Q + G+Y++LP G K L + ++REE Sbjct: 1 MRASKFFYKTLREDPKDAEATSHKLLIRASMIKQIASGVYAFLPFGHKVLKKIETVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R G EM++ + A++W ++GR++ YG +M++ DR ++ GPTHEE +T + Sbjct: 61 MDRIGGQEMTMSIMMPAEMWKKTGRWELYGDDMIKFKDRKEQDFCLGPTHEEQITTLAGQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ KFRDE RPRFG++R REF+MKDAYSF + E K +Y+++ + Sbjct: 121 LISSYKQLPQLVYQIQTKFRDEPRPRFGLIRLREFVMKDAYSFHDSEESLKTTYDQVLNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 Y RI R+GL + A+ G IGG LSHEFIV A+ GE+ VF Sbjct: 181 YKRILERIGLNYEVVAADPGQIGGTLSHEFIVPAEVGESTVFKCDSCGYVAT 232 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 75/192 (39%), Positives = 106/192 (55%), Gaps = 8/192 (4%) Query: 249 VEQWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 VE P+ D+ D P+ S G+EVGHIF GT+YS P+ A + D Sbjct: 366 VEVSELPFHEIVDLAEVAEGDLCPQCGSPLRSFTGLEVGHIFRLGTRYSEPLEAFYHSED 425 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 G+ MG YGIG R+V+AVIE HD GI+WP SVAP+ + +I I + + Sbjct: 426 GERKPFIMGCYGIGVTRLVSAVIEQHHDDFGIVWPWSVAPYHVVIIPIGDVEAQV----Q 481 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 ++ LS G DVF DD E+ G +F ADL+GFP++++V +K + KVEIK R TG Sbjct: 482 ELENTLSSAGLDVFVDDRDERPGVKFVDADLIGFPVRLVVNAK--KEGKVEIKFRKTGET 539 Query: 427 EDMSLEEVINYA 438 + E+V++ Sbjct: 540 LLVGQEDVLDTV 551 >gi|313891975|ref|ZP_07825576.1| proline--tRNA ligase [Dialister microaerophilus UPII 345-E] gi|313119618|gb|EFR42809.1| proline--tRNA ligase [Dialister microaerophilus UPII 345-E] Length = 574 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 111/273 (40%), Positives = 162/273 (59%), Gaps = 2/273 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + P L+E P +A + SHK ML+ GMI + S G YS+LPL +++ + II EE Sbjct: 1 MKASKLYAPTLREIPSEAVVISHKYMLKAGMIRKISSGFYSYLPLAWRSIKKIENIIHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + + E+ + Q A++W ++GR+D YG+EM RL DR+++ PTHEE++T + Sbjct: 61 MAKIESQEILMSIAQPAEIWQQTGRWDVYGEEMFRLKDRHERDYCLAPTHEELVTTLVHM 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY+ LP + YQIQ K+RDE RPRFG+MRSREF+MKDAY+FD+ EG Y+ M+ + Sbjct: 121 DTFSYKQLPVSLYQIQNKYRDEKRPRFGLMRSREFIMKDAYTFDVDEEGLDKQYHDMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF + GL + A+SG IGG SHEF VLA+ GE + + +F E D Sbjct: 181 YTNIFTKCGLNFRTVIADSGAIGGSSSHEFEVLAEAGEADIVY-EVDGEFAANVEAVIPD 239 Query: 241 DII-SLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 I +L + +E+ + + F LP Sbjct: 240 TISCNLKNDLEKEIVETPGQETIEDVCKFLGLP 272 Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 101/189 (53%) Query: 258 ATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 T + ++ + +GIEVG +F GTKYS ++ T+ +GK + MG Y Sbjct: 382 ETIRLIDKNDVSPWTGKEIEFKKGIEVGQVFKLGTKYSESLNCTYLDKNGKSKPMVMGCY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R +AA IE +HD GIIW S+AP+++ +I + E++Y +SK Sbjct: 442 GIGVTRTMAASIEQNHDKDGIIWAVSIAPYEVVIIPANNKNSEVMKVAEELYRNMSKENN 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 ++ +DD E+ G +F ADL+G+P++V +G K+ + KVEIK R TG ++ ++ Sbjct: 502 EIVFDDRNERAGIKFKDADLIGYPIRVTIGKKWEENGKVEIKIRRTGEVIEIDYKDCKAK 561 Query: 438 ASHRFSNNR 446 + R Sbjct: 562 VESILDDLR 570 >gi|88608148|ref|YP_506185.1| threonyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama] gi|123763729|sp|Q2GEB1|SYT_NEOSM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|88600317|gb|ABD45785.1| threonyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama] Length = 637 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 72/442 (16%), Positives = 151/442 (34%), Gaps = 41/442 (9%) Query: 5 KYFLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L L + RD + L + + ++G W G + IR + Sbjct: 232 EAYLSFLHEAKKRDHRAIGKTMELF--HLQEEAQGQVFWHENGFILYRVLENYIRNKLKT 289 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + + LW SG + + + M + +D P + ++++ +K Sbjct: 290 HGYREVKTPLVYNKCLWERSGHWSKFKENMF-VIRSDDGEFSLKPMNCPAHIEVYKQSLK 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + + R+E G+MR R F+ DA+ F + + Sbjct: 349 SYRDLPLRLAEFGMCHRNEASGALHGLMRVRGFVQDDAHIFCTPQQICDETIAF-CGLLK 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ LG + +R P + E D + + D Sbjct: 408 EVYRDLGFTEVEVRFSDRPEVRLGNDE-----------------TWDKAEIALKSAMDKA 450 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + ++ A Y + L D+L + ++ F + + AT+ Sbjct: 451 GLIYTLNPGEGAFYGPKIEF---VLVDALKRKWQCGTLQVD----FVLPER----LDATY 499 Query: 303 KGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 +G K H V + +G ++ +DGK +W +++ + Sbjct: 500 IDHEGKKQHPVMLHRAILGTFERFLGILIEHYDGKFPLWLAPTQVAVLTIT------EKV 553 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + + LSK G D ++I + P+ I+G + V ++ Sbjct: 554 EEYAKSLLNHLSKTGIRAVSDFSNQRIDYKIRYHTTRRVPILWIIGRIEEKSNSVTVRRM 613 Query: 422 LTGIREDMSLEEVINYASHRFS 443 + E +++ + F+ Sbjct: 614 GSSESEVKTVDTALGDILREFN 635 >gi|86606966|ref|YP_475729.1| prolyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab] gi|114152267|sp|Q2JSB6|SYP_SYNJA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|86555508|gb|ABD00466.1| prolyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab] Length = 609 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 109/241 (45%), Positives = 147/241 (60%), Gaps = 6/241 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ L+E+P +AE+ SHKL+LR G I + S GIY++LPL + L ++ I+REE Sbjct: 6 RLSQMLFVTLREDPAEAELISHKLLLRGGFIRRLSPGIYTYLPLLWRVLQKISDIVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDIF 118 N GA E +P LQ A++W ESGR+D Y + M L DR + GPTHEEV+T + Sbjct: 66 NAIGAQECLLPQLQPAEIWRESGRWDVYTQAEGIMFALKDRQGREQALGPTHEEVITLLA 125 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 R I+SYR LP YQIQ KFRDE+RPRFG++R REFLMKDAYSF E + +Y M+ Sbjct: 126 RDLIRSYRQLPQILYQIQTKFRDEIRPRFGLLRGREFLMKDAYSFHANEESLRQTYQDMY 185 Query: 179 VSYLRIFHRLGLKSIPMRAESGPI--GGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 +Y RI R GL+ + A++G I S EF+VLA GE ++ + D + E Sbjct: 186 RAYGRILRRCGLEFCVVEADAGAIGGPSAASQEFMVLASAGEDEILYTPDGS-YAANVEK 244 Query: 237 T 237 Sbjct: 245 A 245 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 102/196 (52%), Gaps = 4/196 (2%) Query: 251 QWTAPYAATSDVHNEKLFDSL---PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 P A DV + D P+ +ARGIE+GHIF G K+SLPM A+F G Sbjct: 408 GEQYPLAEVVDVRKAQAGDRCLLNPDQILETARGIEIGHIFQLGLKFSLPMRASFTDEQG 467 Query: 308 KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + + MG YGIG R+ A +E SHD GIIWP ++AP+ + ++ D EK Sbjct: 468 SEQPLWMGCYGIGVSRLAQAAVEQSHDANGIIWPVAIAPYHVVVVVPNVSDPEQTKVAEK 527 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + L+ G + WDD E+ G +F ADL+G P ++ G + + KVE+ R TG Sbjct: 528 LVQELAAAGIETLWDDRDERAGVKFKDADLIGIPYRLTTG-RSLKQGKVELAERATGQAV 586 Query: 428 DMSLEEVINYASHRFS 443 ++ +EEV+ R + Sbjct: 587 EIPIEEVVATLKERIA 602 >gi|318041217|ref|ZP_07973173.1| threonyl-tRNA synthetase [Synechococcus sp. CB0101] Length = 570 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 68/424 (16%), Positives = 128/424 (30%), Gaps = 37/424 (8%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + +E R D L L + + + G+ W P G + + + RE G Sbjct: 158 YKRRQEEAKRRDHRRIGTDLDLFS-IEDEAGAGLVFWHPRGARMRLLIENLWRELHFAAG 216 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + LW SG D Y + M +++ P + + S ++SY Sbjct: 217 YELLYTPHVADISLWKTSGHLDFYSESMFGPMQVDEREYQLKPMNCPFHVLTYASTLRSY 276 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + ++ +R E G+MR R F DA+ F L + S + +I Sbjct: 277 RELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPDQISDE-ILAILNLTEQI 335 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + + P + D Sbjct: 336 LSTFDFRHYEINLSTRPEKS-----------------IGEDAVWELATQGLIEALDRKGW 378 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D++ + S ++ F ++ L A Sbjct: 379 AYKIDEGGGAFYGPKIDL---KIEDAIGRMWQCSTIQLD----FNLPERFDLEYVAA--D 429 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + + + R + E+ RD Sbjct: 430 GSRQRPIMIHRAIFGSLERFFGIMTENYAGDFPFWLAPEQIRLLPVT-------DEVRDY 482 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + A L G D G+++G + + P+ ++G+K ++ ++ R G Sbjct: 483 AAGVAAELQAAGVRASIDHSGDRLGKLIRNGEQMKIPVLGVIGAKEAESGQISLRSRRDG 542 Query: 425 IRED 428 Sbjct: 543 DLGS 546 >gi|260578838|ref|ZP_05846745.1| threonine--tRNA ligase [Corynebacterium jeikeium ATCC 43734] gi|258603136|gb|EEW16406.1| threonine--tRNA ligase [Corynebacterium jeikeium ATCC 43734] Length = 667 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 64/458 (13%), Positives = 135/458 (29%), Gaps = 49/458 (10%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD +L L + + G + P G + R+ Sbjct: 230 LAEYQTMMAEAEKRDHRRLGQELDLFS-FPDEIGSGFPVFHPDGGIVRLEMEEHSRKRHI 288 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND------------KAMIYGPTH 110 +G ++ P + DL+ +SG D Y M + + P + Sbjct: 289 ASGYSFVNTPHVTKGDLFQKSGHLDFYADGMFPPMQLDGETDDEGNVTKPAQDYYAKPMN 348 Query: 111 EEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEG 169 + IF S +SYR LP ++ +R E G+ R+R F DA+ + T + Sbjct: 349 CPMHNLIFASRGRSYRELPLRLFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYC-TEDQ 407 Query: 170 SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMD 229 + + + + GL + + + S + + Sbjct: 408 LEQELTTVLEFIISLLRDYGLDDFYLELST----------------KDPNKFVGSDEIWE 451 Query: 230 FPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY 289 A Y + + D++ ++S ++ F Sbjct: 452 RSTEILERVATKSGLELVPDPAGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FN 504 Query: 290 FGTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 ++ + + DG + G++ V+ + G W Sbjct: 505 LPERF----NLEYTAPDGSKQRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVVG 560 Query: 349 ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGS 408 I + + E A L G D +++ + P ++VG Sbjct: 561 IPVA------DEFNEYLENFAADLRAQGIRAEVDTSDDRMQKKIRNHTTGKVPFMLLVGG 614 Query: 409 KFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 + V + V + + E+ + S+ + R Sbjct: 615 RDVEANAVSFRFLDGTQVNGVPREDALRIISNWIAERR 652 >gi|39725443|emb|CAE45679.1| Threonyl-tRNA synthetase [Streptomyces parvulus] Length = 675 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 73/441 (16%), Positives = 145/441 (32%), Gaps = 35/441 (7%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L + +G+ WLP G D + R+ + + G Sbjct: 254 LAALEEAAKRDHRRIGEELDLFA-FNKEIGRGLPLWLPNGAIIRDELEDWARKTERKLGY 312 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P + DL+ SG Y +++ D + + P + ++++ SYR Sbjct: 313 KRVVTPHITQEDLYYLSGHLPYYAEDLYAPIDIDGEKYYLKPMNCPHHHMVYKARPHSYR 372 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP+ + +R E + G+MR+R F DA+ + + M + Sbjct: 373 DLPYKVAEYGTVYRFERSGQLHGMMRTRGFSQNDAHIYCTADQAKDQFLEVMRMHADYYR 432 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + A D H+ + + E + + D P + Sbjct: 433 TLGISDFYMVLALRDSANKDKYHDDEQMWEDAERITREAMEESDIPFQIDL--------- 483 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 A Y D + + S +++ FG T+ + Sbjct: 484 -----GGAAHYGPKVDFMIRAVT---GKEFAASTNQVDLYTPQRFG--------LTYHDS 527 Query: 306 DGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG + V + +G+ A + G +W I ++ + D Sbjct: 528 DGTEKPVVVIHRAPLGSHERFTAYLTEHFAGAFPVWLAPEQVRIIPIV------EELTDY 581 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++ L D ++ ++ A PL V+VG + V ++ R +G Sbjct: 582 AEEVRDMLLDADVRADVDAGDGRLNAKVRAAVTRKIPLVVVVGRREAEQRTVTVRDR-SG 640 Query: 425 IREDMSLEEVINYASHRFSNN 445 MSLE+ + + + Sbjct: 641 EETPMSLEKFVAHVTGLIRTK 661 >gi|66362768|ref|XP_628350.1| threonyl-tRNA synthetase (RNA binding domain TGS+HxxxH+tRNA synthetase) [Cryptosporidium parvum Iowa II] gi|46229397|gb|EAK90215.1| threonyl-tRNA synthetase (RNA binding domain TGS+HxxxH+tRNA synthetase) [Cryptosporidium parvum Iowa II] Length = 763 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 80/450 (17%), Positives = 147/450 (32%), Gaps = 40/450 (8%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R +Y + + RD + L L S G WLP G + + + IR E Sbjct: 319 RLDEYLNMLEEAKKRDHRLLGSNLQLF-FFDSNVSPGSCFWLPAGARLYNKLMDFIRNEY 377 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 E+ P + S DLW SG Y +Y + M + D +K P + +F+ Sbjct: 378 RIREFTEVITPNIFSCDLWKTSGHYFAYKENMF-IFDVEEKEWGLKPMNCPGHCVMFKHM 436 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SYR LP + R+E G+ R R F DA+ F + + + Sbjct: 437 NPSYRQLPIRLADFGVLHRNEFSGALNGLTRVRRFQQDDAHIFCTPEQIQEEVFK-ALDF 495 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 I+ +LG F + T + +++ + + D Sbjct: 496 LFFIYGQLGFT------------------FDLFLSTMPKEHLGTEEQWKEAENALKSALD 537 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTKYSLPM 298 + A Y D+ L+D+L + ++ F + + Sbjct: 538 KTGRDWKLNPGDGAFYGPKIDIM---LWDALKRQHQCGTIQLDFQLPIRFNLQYRTDENI 594 Query: 299 SATFKGADGKDHY-----------VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 S + + Q + R + +E + + Sbjct: 595 SEESTNQEQPPSHQNADQNPDNSLKQGYRRPVIIHRAILGSVERMSAVILEHTGGKLPFW 654 Query: 348 KISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIV 406 I + + + + L + G DV D I + + LL + +++ Sbjct: 655 LSPRQAIVLSISEKTVEYAKSVERELCRRGFDVSGDYSAATINKKIRESQLLQWNYMLVI 714 Query: 407 GSKFVSDSKVEIKHRLTGI-REDMSLEEVI 435 G D KV ++ R T I +E ++L+++I Sbjct: 715 GENEARDKKVTLRCRDTTIPQELLTLDQLI 744 >gi|241668104|ref|ZP_04755682.1| prolyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876639|ref|ZP_05249349.1| prolyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842660|gb|EET21074.1| prolyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 565 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 107/241 (44%), Positives = 160/241 (66%), Gaps = 1/241 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+P+G K L + I+REE Sbjct: 1 MKATQTLIATTKELPKEAVLTSHQYMLKAGLIKKLASGIYTWMPIGLKVLQKIQNIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 61 MNKAGASELLLPSVLPSELLQETHRWDKFGPELLKLKDRHERDFCYGPTHEEPIVDMARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF + ++YNKM + Sbjct: 121 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSQCLHNTYNKMHET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y I ++GL P+RA++G IGGD SHEF VLA+ GE + C + D+ E + Sbjct: 181 YCNILDKIGLVYRPVRADTGAIGGDNSHEFQVLANAGE-DIICYSNSSDYAANIELATYA 239 Query: 241 D 241 Sbjct: 240 K 240 Score = 153 bits (386), Expect = 7e-35, Method: Composition-based stats. Identities = 67/183 (36%), Positives = 105/183 (57%), Gaps = 3/183 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+N GIEVGHIF YS PM+A DGK + MG Y Sbjct: 383 ADIRNVVTGDISPDNNGTLELTNGIEVGHIFELEDVYSKPMNANIISQDGKSKPMLMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVG 376 G G RV+AA IE SHD GIIWP+++AP++++++ I + + +K+Y L G Sbjct: 443 GFGVSRVMAAAIEQSHDENGIIWPEAIAPYQVAILPINYNKSESVKQTADKLYQELLAKG 502 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD G + G FA ADL+G+ V++G + + +E K+R T +++++LE++++ Sbjct: 503 IDVILDDRGARPGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITLEKLLD 562 Query: 437 YAS 439 + Sbjct: 563 ILA 565 >gi|254580109|ref|XP_002496040.1| ZYRO0C09086p [Zygosaccharomyces rouxii] gi|238938931|emb|CAR27107.1| ZYRO0C09086p [Zygosaccharomyces rouxii] Length = 716 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 76/447 (17%), Positives = 164/447 (36%), Gaps = 43/447 (9%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E RD + L M ++ S G WLP G + + +++ E + G Sbjct: 299 LKFLEEASLRDHRRIGREQELF--MFNEMSPGSCFWLPHGTRIYSTLVDLLKNEYRKRGY 356 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + ++ LW SG + Y + M + P + +F+S +SYR Sbjct: 357 EEVITPNMYNSKLWETSGHWGHYKENMFTFEVEKEM-YGLKPMNCPGHALMFKSRERSYR 415 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP+ + R+E G+ R R F DA+ F + + + ++F Sbjct: 416 ELPWRVADFGVIHRNEFSGALTGLTRVRRFQQDDAHIFCRSDQIGQE-IERIFDFLSF-- 472 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 I G EF + T + + + + + Sbjct: 473 ----------------IYGVFGFEFKMELSTRPEKYVGKLETWNAAEATLEAALNKWGGK 516 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + A Y D+ + D+L + + ++ F +++L + Sbjct: 517 WELNPADGAFYGPKIDIM---ISDALRRWHQCATIQLD----FQLPDRFALEYKSKDNDN 569 Query: 306 DGKDH--YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +G+ + V + +G++ + A++ + WP ++P +I ++ + + Sbjct: 570 EGETYERPVMIHRAILGSVERMTAILT---EHFAGKWPFWLSPRQILVVPVGVK---YQP 623 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ ++ G D G + + +L + IVG + +++ V I++R Sbjct: 624 YAQEVRDKMHNAGFYADVDLSGNTLQKKVRNGQMLKYNFIFIVGEQEMNEKSVNIRNRDV 683 Query: 424 GIRE----DMSLEEVINYASHRFSNNR 446 ++ +S+E V+ S+ R Sbjct: 684 MEQQGKNATVSVETVLEQLKKLKSDMR 710 >gi|167627536|ref|YP_001678036.1| prolyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189083499|sp|B0TXX4|SYP_FRAP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|167597537|gb|ABZ87535.1| prolyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 565 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 108/241 (44%), Positives = 160/241 (66%), Gaps = 1/241 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + +E P++A + SH+ ML+ G+I + + GIY+W+P+G K L + I+REE Sbjct: 1 MKATQTLIATTKELPKEAVLTSHQYMLKAGLIKKLASGIYTWMPIGLKVLQKIQNIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GA E+ +P++ ++L E+ R+D +G E+L+L DR+++ YGPTHEE + D+ R Sbjct: 61 MNKAGASELLLPSVLPSELLQETHRWDKFGPELLKLKDRHERDFCYGPTHEEPIVDMARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE+RPRFGVMR+REF+MKDAYSF E ++YNKM + Sbjct: 121 TIKSYKQLPLNLYQIQTKFRDEIRPRFGVMRAREFIMKDAYSFHENSECLHNTYNKMHET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y I ++GL P+RA++G IGGD SHEF VLA+ GE + C + D+ E + Sbjct: 181 YCNILDKIGLVYRPVRADTGAIGGDNSHEFQVLANAGE-DIICYSNGSDYAANIELATYA 239 Query: 241 D 241 Sbjct: 240 K 240 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 70/183 (38%), Positives = 104/183 (56%), Gaps = 3/183 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+N GIEVGHIF YS PM+A G DGK + MG Y Sbjct: 383 ADIRNVVTGDISPDNNGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCY 442 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYARLSKVG 376 G G RV+AA IE SHD GIIWP+++AP++++++ I + + +K+Y L G Sbjct: 443 GFGVSRVMAAAIEQSHDENGIIWPETIAPYQVAILPINYNKSESVKQTADKLYQELLVKG 502 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD G + G FA ADL+GF V++G + + VE K+R T ++++ LE++ + Sbjct: 503 IDVILDDRGARPGVMFADADLIGFSHHVVIGDRLLEQGLVEYKNRKTQEKQEIRLEKLFD 562 Query: 437 YAS 439 + Sbjct: 563 ILA 565 >gi|325860506|ref|ZP_08173616.1| threonine--tRNA ligase [Prevotella denticola CRIS 18C-A] gi|325481987|gb|EGC85010.1| threonine--tRNA ligase [Prevotella denticola CRIS 18C-A] Length = 649 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 78/450 (17%), Positives = 151/450 (33%), Gaps = 38/450 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L + KG+ WLP G + + ++R Sbjct: 232 EYLVMLEEAKKRDHRKIGKEMELFM-FSDRVGKGLPIWLPKGTQLRLRLQDLLRRLLRPY 290 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + +L+V SG Y YGK+ + D+ + P + +++ Sbjct: 291 NYQEVITPGIGGKNLYVTSGHYAHYGKDSFQPIHTPEEDEEYMLKPMNCPHHCEVYAYKP 350 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + FR E G+ R R F DA+ F + + Sbjct: 351 RSYKDLPLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPEQVKTE-FETNIDII 409 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L++F G + + D + + + D + + + Sbjct: 410 LKVFKTFGFDNYEAQISLR--------------DPNDKEKYIGSDEVWEESEAAIKQACE 455 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + VE A Y D + D++ ++ ++ F Sbjct: 456 EKGLKARVELGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLPNRF--------KL 504 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D + G++ AV+ G +W + I + Sbjct: 505 EYTAEDNSKKTPVMIHRAPFGSLERFTAVLIEHTAGHFPLW------LTPDQVAILPISE 558 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D K+ A L DD E+IG + +L P VIVG K ++ V ++ Sbjct: 559 KYNDYAFKVKAYLDAHDVRSIMDDRNEKIGRKIRDNELKRVPYMVIVGEKEAAEGLVSMR 618 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNRPVL 449 + G + M++E + ++ L Sbjct: 619 QQGGGEQATMTMEAFAERINAEVADQLKTL 648 >gi|329947841|ref|ZP_08294773.1| proline--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386] gi|328523465|gb|EGF50563.1| proline--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386] Length = 619 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 93/240 (38%), Positives = 138/240 (57%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S F+ L+E+P DAE+ASH+L++R I + + G+Y+WLPLG + L + AI+R+ Sbjct: 12 RLSTSFIRTLREDPADAEVASHRLLVRACYIRRAAPGVYTWLPLGLRTLRKIEAIVRQGM 71 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ P L ++ + +GR++ YG + +L DR D + PTHEE+ T + Sbjct: 72 DAMGGQEVHFPALLPSEPYQATGRWNDYGPTLFKLHDRKDGDYLLAPTHEEMFTLAVKDL 131 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G +Y +Y Sbjct: 132 YSSYKDLPAIVYQIQTKYRDEARPRAGIIRGREFVMKDSYSFDIDDAGLAAAYQAHRDAY 191 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF RLGL + + A +G +GG S EF+ + GE S + T D Sbjct: 192 ERIFARLGLDYVIVNAMAGAMGGSHSEEFLYPCEIGEDTFVRSSGGYAANAEAVTTVVPD 251 Score = 142 bits (359), Expect = 9e-32, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 98/198 (49%), Gaps = 8/198 (4%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ ARGIE+GHIF G KYS + T +GK V MG Sbjct: 423 GTIEAAEVREGDPAPDGSGPLHLARGIEIGHIFELGRKYSQALGLTVLDENGKARVVTMG 482 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG RV+AA+ E++HD KG+ WP +AP+ + ++ DQ D E++ + L Sbjct: 483 SYGIGVSRVMAALAEANHDDKGLSWPVQIAPYHVQVLATG-KDQAVFDVAEQVASALDAD 541 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS---- 430 G +V +DD G +FA A+LLG P ++VG + VEI+ R TG R + Sbjct: 542 GVEVLYDDRRKVSAGVKFADAELLGLPYTLVVGRDLAKEGTVEIRDRRTGDRRSVPADAA 601 Query: 431 LEEVINYASHRFSNNRPV 448 E+ R + Sbjct: 602 AAELSATVRAALEAARNL 619 >gi|297697604|ref|XP_002825941.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like [Pongo abelii] Length = 707 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 74/447 (16%), Positives = 150/447 (33%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + + + +E RD + L H S G +LP G + + IREE Sbjct: 290 KMMRNWEKFQEEAKNRDHRKIGKEQELF--FFHDLSPGSCFFLPRGAFIYNTLTDFIREE 347 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ E+ P + ++ LW SG + Y + M D P + +F Sbjct: 348 YHKRDFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIEKDT-FALKPMNCPGHCLMFAH 406 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R +P F + R+EL G+ R R F DA+ F + + Sbjct: 407 RPRSWREMPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQ-IEEEIKGCLQ 465 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G F + T + + Sbjct: 466 FLQSVYSTFGFS------------------FQLNLSTRPENFLGEIEMWNEAEKQLQNSL 507 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D + A Y D+ K+ D++ + + ++ F +++L Sbjct: 508 MDFGEPWKMNPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRFNLTYV 560 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K V + +G++ + A++ + G WP ++P ++ +I + Sbjct: 561 SK--DGDDKKRPVIIHRAILGSVERMIAILS---ENYGGKWPFWLSPRQVMVIPVGP--- 612 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C ++ + + G D D + + A L + ++VG K D+ V + Sbjct: 613 TCEKYALQVSSEFFEEGFMADVDLDHNCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNV 672 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R I ++ + I+ + Sbjct: 673 RTRDNKIHGEILVTSAIDKLKNLKKTR 699 >gi|116492650|ref|YP_804385.1| prolyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745] gi|122265886|sp|Q03FS9|SYP_PEDPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116102800|gb|ABJ67943.1| Prolyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745] Length = 571 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 107/263 (40%), Positives = 156/263 (59%), Gaps = 2/263 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK + ++E P DAE+ SHK+MLR G I Q S G+Y++LPL K + + I+REE Sbjct: 1 MKQSKILISTVKEVPNDAEVLSHKMMLRAGYIRQISAGMYAYLPLAYKVISKIEKIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+EM P + A+LW +SGRY++YG+E+ + +R+D+ I GPTHEE MT + R Sbjct: 61 MEAIDAVEMLTPAVLPAELWKQSGRYETYGQELYKFKNRHDRDFILGPTHEETMTTLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP + YQIQ+K+RDE RPR+G++R REFLMKDAYSF E S+ + Sbjct: 121 EVKSYKKLPLSLYQIQMKYRDEDRPRYGLLRGREFLMKDAYSFHADEETLDQSFRDFEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + ++G +GG S EF +A GE + S++ + Sbjct: 181 YQNIFRRCGLNFREIVGDAGAMGGRDSKEFSAIASIGEDTIAYSEESDYAANLEMASSVY 240 Query: 241 DIISLNSIVEQWTAPYAATSDVH 263 + ++ E+ T AT D H Sbjct: 241 TDLQMHENQEELTK--VATDDAH 261 Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats. Identities = 70/229 (30%), Positives = 109/229 (47%), Gaps = 2/229 (0%) Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE-QWTAPYAATSDVHNEKLFDSLPEN 274 ++ K + D N VE +T A E + Sbjct: 341 PENLKIVADKYIEQMVNSVVGANEDGFHLKNVNVERDFTVDEYADIRTVREGELAPDGKG 400 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 +GIE+GHIF GTKYS + A +G+ V MG YGIG R+++AV E D Sbjct: 401 ALKFTKGIEIGHIFKIGTKYSEALDAKVLDENGRAIPVIMGCYGIGVSRLLSAVSEQQSD 460 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 G++WP ++AP+ + +I + A + + ++I L+K G DV DD E+ G +FA Sbjct: 461 ENGLVWPKNIAPYDVHVIPVNAKNAEQMEIADQINGELTKAGYDVLVDDRKERAGVKFAD 520 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 +DL+G PL+V +G K S+ VE+K R TG ++ + E+ N + Sbjct: 521 SDLIGIPLRVTIGKK-ASEGIVEVKLRKTGEAVEVKVAELNNTVEILLN 568 >gi|57168347|ref|ZP_00367481.1| threonyl-tRNA synthetase [Campylobacter coli RM2228] gi|57020155|gb|EAL56829.1| threonyl-tRNA synthetase [Campylobacter coli RM2228] Length = 602 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 71/437 (16%), Positives = 147/437 (33%), Gaps = 40/437 (9%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 I + RD +L L T + G+ WL G + + ++ + G + Sbjct: 201 IEEAKKRDHRKLGTELKLFT-FDDEIGGGLPIWLSNGARLRSKLEHMLYKIHRLRGYEPV 259 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P L AD W SG Y +Y + M +++ P + I++S ++SYR+LP Sbjct: 260 RGPELLKADAWKISGHYANYKENM-YFTQIDEQEYGIKPMNCVGHIKIYQSDVRSYRDLP 318 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 F++ + R E G+ R REF DA+ F + P K ++ + Sbjct: 319 LKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCM-PSQIKEQVLEILAFVDNLMKLF 377 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 T + + D + D+ I Sbjct: 378 DFSYEMEI------------------STKPAKAIGDDEIWDTATKALKEALDEQGLKYGI 419 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 E A Y D+ K+ D+L + ++ F ++ + ++ + Sbjct: 420 DEGGGAFYGPKIDI---KITDALKRKWQCGTIQVD----FNLPERF----KLEYTDSNNE 468 Query: 309 DHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + +G+ ++ + + + I ++ Sbjct: 469 KKQPVMLHRAILGSFERFIGILTEHC------AGEFPFFIAPTAVGIVPISDSHIAYAKE 522 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 I L ++ D + E + + A+ P+ +++G + V+ V ++ R ++ Sbjct: 523 IQRALLELNIDSEVYEKNESLSKKIRTAEKQKLPMILVLGDEEVAKRSVALRDRRAKEQK 582 Query: 428 DMSLEEVINYASHRFSN 444 ++SL+E I + S Sbjct: 583 NLSLDEFIKLVKEKMSE 599 >gi|227890230|ref|ZP_04008035.1| prolyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200] gi|227849232|gb|EEJ59318.1| prolyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200] Length = 565 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 115/282 (40%), Positives = 155/282 (54%), Gaps = 1/282 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SH+LMLR G I Q + G+Y++LPLG + L II EE Sbjct: 1 MRQSKFFMPTLKEAPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLGYRVLRKAENIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MDNINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLQDRHGRESLLGPTHEETFTEIVAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDEQFDDQKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+IF+R G+ P+ A+SG +GG S EF A GE + +++ + E Sbjct: 181 YLKIFNRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNENGT-YAANLEMAKSI 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 D + A A EKL D L + I Sbjct: 240 DTFKQEPEEAKDLAKVATPGMDTIEKLADFLKVPSTRIVKSI 281 Score = 146 bits (367), Expect = 9e-33, Method: Composition-based stats. Identities = 65/192 (33%), Positives = 94/192 (48%), Gaps = 2/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A NE D + IEVGHIF GT Y+ M A F +GK Sbjct: 375 DFKVDEFADIRTANEGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTDTMGADFLDNNGKAK 434 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V MGSYGIG R+++A +E GI WP +APF I LI +K D+ + EK+ Sbjct: 435 PVIMGSYGIGVTRMLSAAVEQHLTENGIAWPKEIAPFAIHLIQMKMKDETQTELAEKLEK 494 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 LS DV +DD E+ G +F ADL+G PL++ +G K D VE+K + +++ Sbjct: 495 ELSAK-YDVLYDDRNERPGVKFNDADLVGAPLRITIGRK-AKDGIVEVKRPMDEKATEVN 552 Query: 431 LEEVINYASHRF 442 + ++ + Sbjct: 553 ISDLDAVITKEL 564 >gi|85057943|ref|YP_456859.1| threonyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma AYWB] gi|123738887|sp|Q2NIG3|SYT_AYWBP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|84790048|gb|ABC65780.1| threonyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma AYWB] Length = 641 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 73/445 (16%), Positives = 154/445 (34%), Gaps = 37/445 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD + + +L L + G+ WLP G V I +++ Sbjct: 229 YLQLLEERKERDHKKINKELDLFM-FNKEVGLGLPFWLPKGATVRRIVERYIVDKELSYD 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHIKS 124 + P + + +L+ SG D Y M + + ++ P + I++ + S Sbjct: 288 YHHVYTPIMANTELYRISGHLDHYASNMFPIMSLENGEKLVLRPMNCPHHMMIYKKNPHS 347 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 Y+ LP ++ + R E G+ R RE + DA+ F P+ K K+ L Sbjct: 348 YKELPLRIAELGMMHRFEKSGAVSGLQRVREMTLNDAHIF-ARPDQIKEEIKKIINLILE 406 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ +K+ +R + F + ++ Sbjct: 407 VYCDFNIKNYELRLS-------------YRNPNNTEKYFNDDQMWYNAEKTLKETIKELG 453 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 A Y DV ++F++L + +S ++ F K+ TF Sbjct: 454 LPFKEAIGEAAFYGPKLDV---QVFNALGNEETLSTVQLD----FLLPQKFD----LTFI 502 Query: 304 GADGKDHYVQMGSYGIG--AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G D K H + + R +A ++E + + + Sbjct: 503 GEDNKHHRPVVIHRAVVSTMERFLAHLVEETKGVFPLWLAPVQVLLIPVSAPL------H 556 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + +KI L V + +G + A L P QV++G + ++ + + Sbjct: 557 FEFSQKIKETLQLQNFRVEINSKDNTLGYKIREAQKLKIPYQVVIGDHEMINNLITFRKY 616 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + ++ + ++E ++ + + Sbjct: 617 GSHLQTTIKVDEFVSLLKDKVLQKK 641 >gi|257440090|ref|ZP_05615845.1| threonine--tRNA ligase [Faecalibacterium prausnitzii A2-165] gi|257197442|gb|EEU95726.1| threonine--tRNA ligase [Faecalibacterium prausnitzii A2-165] Length = 611 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 72/438 (16%), Positives = 147/438 (33%), Gaps = 38/438 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD ++ L M +G+ +LP G + I+E++ G + + Sbjct: 204 EARERDHRKIGKEMGLF--MTDDLVGRGLPMFLPAGYTVWQELENYIKEKERARGYLHVM 261 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + + +L+ SG +D Y + M + ++ + P + I+ + SYR+LP Sbjct: 262 TPCIGTVNLYKTSGHWDHYRENMFPAMEMEGESYVLRPMNCPHHMMIYANRPHSYRDLPM 321 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 +I FR E G+ R R F DA+ F + + + + Sbjct: 322 RIGEIAHDFRYESSGTLKGIERGRHFCQNDAHLFCTPEQIKSEVADVCNLIFETYKDFKI 381 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + P H+ + + ++ + Sbjct: 382 TDYRCVLSLRDPADKKKYHD--------------DDAMWNHAENALREVLTELGIHFTEE 427 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y DV + ++ +S ++ F K+ T+ DG + Sbjct: 428 IGEAAFYGPKLDV---NVKPAVGAEYTLSTCQLD----FCLPAKF----HLTYVDKDGSE 476 Query: 310 HYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + +G++ A + GK W V + + + + E I Sbjct: 477 KTPVVLHRAILGSLDRFMAYLIEETKGKFPTWLAPVQVKVLPV------SEKTLEYAESI 530 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLL-GFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +L + G V DD ++IG + A + P +++G+K + ++ R G Sbjct: 531 TEKLVEAGVRVALDDDNQKIGYKIRAAQQVDRVPYMLVLGAKEAEAGNLSVRDRK-GETT 589 Query: 428 DMSLEEVINYASHRFSNN 445 M ++E I + Sbjct: 590 TMEVDEFIAKVTEEIKTR 607 >gi|242309901|ref|ZP_04809056.1| prolyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489] gi|239523198|gb|EEQ63064.1| prolyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489] Length = 578 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 106/260 (40%), Positives = 158/260 (60%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S +F+P L+E P+D + SH+ +LR G I Q GIY++LPLG++ LD ++ I+++E Sbjct: 1 MRFSNFFIPTLKETPKDVVLKSHEYLLRGGFIQQIGSGIYNFLPLGKRVLDKISKIVKQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ + + A LW SGRY+ YGKE+LR DR + ++GPTHEE +T++ ++ Sbjct: 61 MDNAGANEVLLGCVTPASLWQASGRYERYGKELLRFKDRKENEFVFGPTHEETITELVKT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF + E K +++M + Sbjct: 121 YVKSYKQLPLHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHSSYEDLKREFDEMERT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF +LGL + A+SG IGG S EF+VLA++GE + + + Sbjct: 181 YSVIFSKLGLDFRAVEADSGAIGGSGSKEFMVLAESGEDTICVCDNCSYAANLEAANRLE 240 Query: 241 DIISLNSIVEQWTAPYAATS 260 +T + Sbjct: 241 KSTQTPPPQANFTKFHTPDV 260 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 58/181 (32%), Positives = 89/181 (49%), Gaps = 1/181 (0%) Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIG 320 +V + + +GIEVGHIF G KYS M ATF +GK MG YGIG Sbjct: 393 EVQEGDICKKCQKGHLYFTKGIEVGHIFQLGEKYSQAMGATFLDENGKSKPFIMGCYGIG 452 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 R++AA+IE +D KG+ W + APF + ++ D + +IY LS+ + Sbjct: 453 ISRLLAAIIEQHYDEKGMKWTKATAPFLLDIVISNVKDCEQVELATRIYHALSEQKIECL 512 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 DD E+ G++ A +L+G P +IVG K + + KVE+ R + + + + Sbjct: 513 LDDRNERYGAKMADFELIGMPYALIVG-KGIQEGKVELVCRANLEKTMFEVNDFEGFLES 571 Query: 441 R 441 Sbjct: 572 L 572 >gi|32490830|ref|NP_871084.1| hypothetical protein WGLp081 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|31340448|sp|Q8D3C0|SYT_WIGBR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|25166036|dbj|BAC24227.1| thrS [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 636 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 83/444 (18%), Positives = 147/444 (33%), Gaps = 39/444 (8%) Query: 5 KYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K F+ ++E RD KL L I+++S G+ W G + IR++ + Sbjct: 229 KNFIKNIKELEHRDHRKIGKKLDLF--HIYENSPGMVFWHHNGWIIFRILEKFIRKKLKK 286 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P + DLW SG D+Y M + +K P + IF+ I+ Sbjct: 287 FYYQEVKTPCIIDHDLWRLSGHLDNYKNYMFH-TNSENKQYCIKPMNCPAHVLIFKKKIR 345 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY+ LPF + R+E G+MR R F DA+ F + + + Sbjct: 346 SYKELPFRISEFGSCHRNEPSGSLHGLMRIRNFTQDDAHIFCMHDQILSE-VSSCIKMIY 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G K I ++ + P S E DF Sbjct: 405 EVYSCFGFKKILVKLSTRPENRIGSDE-----------------IWDFAEKQLELSLKKN 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 L I A Y + L DSL + +++ A + Sbjct: 448 KILFKIDLNEGAFYGPKIEF---TLLDSLNRKWQCGTIQLDLCLANKLQ--------AYY 496 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + I I + +P ++P ++ +IN+ Sbjct: 497 INNKNEKTNPVIIHRAILGSMER--FIGIITEEFSGKYPLWISPIQVGVINVSVD---QI 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D +KI + + D E+I + L P +I G K + + + ++++ Sbjct: 552 DYVKKITKFFLQKKIRIISDLRNEKISFKIREYTLRFIPYIIICGKKEMESNSISVRNKY 611 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 + SLE+ N + Sbjct: 612 GKQLKYSSLEKFYNVIYEEIKQKK 635 >gi|315607978|ref|ZP_07882971.1| threonine--tRNA ligase [Prevotella buccae ATCC 33574] gi|315250447|gb|EFU30443.1| threonine--tRNA ligase [Prevotella buccae ATCC 33574] Length = 650 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 79/445 (17%), Positives = 153/445 (34%), Gaps = 38/445 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L + KG+ WLP G + + ++R Sbjct: 232 EYLVMLEEAKKRDHRKIGKEMELFM-FSERVGKGLPIWLPKGTELRLRLQELLRSMLRPY 290 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + L+V SG Y YGK+ + D+ + P + ++F Sbjct: 291 NYQEVITPGIGGKSLYVTSGHYAHYGKDAFQPIHTPEEDEEYMLKPMNCPHHCEVFARKP 350 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + FR E G+ R R F DA+ F P+ K + Sbjct: 351 RSYKDLPLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVR-PDQVKAEFETNIDII 409 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L++F+ G + + D + + + D + + + Sbjct: 410 LKVFNIFGFDNYEAQISLR--------------DPNDKEKYIGSDEVWEESETAIKEACA 455 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + VE A Y D + D++ ++ ++ F Sbjct: 456 EKGLKARVELGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLPNRF--------KL 504 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D + G++ AV+ G +W + I + Sbjct: 505 EYTAEDNSKKTPVMIHRAPFGSLERFTAVLIEHTAGHFPLW------LTPDQVAILPISE 558 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D + + VG D+ E+IG + +L P VIVG K ++ V ++ Sbjct: 559 KYNDYAKSVARYFDSVGVRAIIDERNEKIGRKIRDNELKRVPYMVIVGEKESAEGLVSMR 618 Query: 420 HRLTGIREDMSLEEVINYASHRFSN 444 + G + M++EE + ++ Sbjct: 619 KQGGGEQATMTMEEFAQRINSEVAD 643 >gi|42527722|ref|NP_972820.1| prolyl-tRNA synthetase [Treponema denticola ATCC 35405] gi|81831353|sp|Q73KJ8|SYP_TREDE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|41818550|gb|AAS12739.1| prolyl-tRNA synthetase [Treponema denticola ATCC 35405] Length = 595 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 101/271 (37%), Positives = 155/271 (57%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ ++P L+E P +A + SHKL+LR GMI + G++++LPLG KA V IIREE Sbjct: 1 MKMTQMYMPTLREIPNEAVVESHKLLLRAGMIRNLANGLFAYLPLGLKAFRKVEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G +E P + ++W ESGR+DS G E+LR+ +R ++ ++ PT EE T + ++ Sbjct: 61 MDAIGCLEFKPPVIVPGEIWQESGRWDSMGPELLRIKNRLNQELVVSPTAEEAFTALLKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+N P YQI K+RDE+RPR+G+MR+REF MKDAYSF + +Y + Sbjct: 121 ELSSYKNYPLLTYQINTKYRDEIRPRYGLMRTREFTMKDAYSFHTNDKSLDEAYLSFEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF R GL I ++A+SG +GG S EF+V + G+ + + Sbjct: 181 YIKIFKRCGLTVIGVKADSGAMGGSGSQEFMVESSVGDDTLLLCPSCGYAANEEKAACAP 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 D N + Q +A D N K + L Sbjct: 241 DKEQGNGNMPQGSALSIEEIDTPNVKTIEDL 271 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 54/181 (29%), Positives = 98/181 (54%), Gaps = 7/181 (3%) Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 ++ + +G E+GHIF G KY+ M+ T+ +GK + MG YGIG R+ A+ Sbjct: 416 KCAVCGTALYTKKGNELGHIFKLGYKYTKAMNMTYLDENGKQQHPSMGCYGIGLDRLTAS 475 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++E HD GIIWP S+APF+++++ IK ++ ++ +++Y K G + DD E+ Sbjct: 476 IVEEHHDEDGIIWPMSIAPFQVAIVPIKYEGEMQKE-ADRLYEECKKRGIEALLDDRKER 534 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN----YASHRFS 443 G +F DL+G P++++VG K + + +E K R + ++V++ + Sbjct: 535 TGVKFKDMDLIGIPIRLVVGEKNLPN--IEFKLRKAVESSLVDKDKVVDLVEKTVKEELA 592 Query: 444 N 444 Sbjct: 593 K 593 >gi|31794022|ref|NP_856515.1| prolyl-tRNA synthetase [Mycobacterium bovis AF2122/97] gi|121638725|ref|YP_978949.1| prolyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991217|ref|YP_002645906.1| prolyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|81834897|sp|Q7TXQ5|SYP_MYCBO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|152112932|sp|A1KMI8|SYP_MYCBP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|31619616|emb|CAD95055.1| PUTATIVE PROLYL-TRNA SYNTHETASE PROS (PROLINE--TRNA LIGASE) (PRORS) (GLOBAL RNA SYNTHESIS FACTOR) (PROLINE TRANSLASE) [Mycobacterium bovis AF2122/97] gi|121494373|emb|CAL72854.1| Putative prolyl-tRNA synthetase proS [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774332|dbj|BAH27138.1| prolyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172] Length = 582 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 101/259 (38%), Positives = 148/259 (57%), Gaps = 1/259 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ASHKL++R G I + G+YSWLPLG + L N+ +IR+E Sbjct: 4 RMSELFLRTLRDDPADAEVASHKLLIRAGYIRPVAPGLYSWLPLGLRVLRNIERVIRDEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 64 NAIGGQEILFPALLPRAPYETTNRWTQYGDSVFRLKDRRGNDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ K+RDE RPR G++R+REF+MKD+YSFD+ G K +Y +Y Sbjct: 124 YSSYKDFPLTLYQIQTKYRDEARPRAGILRAREFVMKDSYSFDIDAAGLKAAYRAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTDFD 240 RIF RL ++ + + A SG +GG S EF+ + +GE V C + + + T Sbjct: 184 QRIFDRLQVRYVIVSAVSGAMGGSASEEFLAESPSGEDAFVRCLESGYTANVEAVVTARP 243 Query: 241 DIISLNSIVEQWTAPYAAT 259 D + ++ + E T Sbjct: 244 DTLPIDGLPEAVVHDTGDT 262 Score = 127 bits (318), Expect = 5e-27, Method: Composition-based stats. Identities = 67/174 (38%), Positives = 93/174 (53%), Gaps = 4/174 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ V ARGIE+GHIF G+KY+ +A G DGK + MG Sbjct: 395 GTIEAAEVREGDPSPDGAGPLVMARGIEIGHIFQLGSKYTDAFTADVLGEDGKPVRLTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VA V E HD G+ WP +VAPF + L I D R + A L ++ Sbjct: 455 SYGIGVSRLVAVVAEQHHDELGLRWPSTVAPFDVHL-VIANKDAQARAGATALAADLDRL 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 G +V DD G +F A+LLG P V+VG + +D VE++ R +G ++ Sbjct: 514 GVEVLLDDRQASPGVKFKDAELLGMPWIVVVG-RGWADGVVELRDRFSGQTREL 566 >gi|113955222|ref|YP_731224.1| prolyl-tRNA synthetase [Synechococcus sp. CC9311] gi|123031649|sp|Q0I8J8|SYP_SYNS3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|113882573|gb|ABI47531.1| prolyl-tRNA synthetase [Synechococcus sp. CC9311] Length = 598 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 112/240 (46%), Positives = 151/240 (62%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P DAEIAS +L++R G I + GIY++LPL + L V I+REE Sbjct: 1 MRVSRLMLVTLRDVPADAEIASQQLLIRGGFIRRVGSGIYAYLPLMWRVLQRVMRIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N+ GA+E +P LQ A+LW +SGR+ Y M L DR ++++ GPTHEEV+T++ Sbjct: 61 MNQIGALETLLPQLQPAELWEKSGRWQGYTAGEGIMFHLEDRQERSLGLGPTHEEVITEL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP T YQIQ KFRDE+RPRFG+MR REF+MKDAYSF Y +M Sbjct: 121 ASDLLRSYRQLPVTLYQIQSKFRDEIRPRFGLMRGREFIMKDAYSFHGDEGDLARMYEEM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y R+F R GL ++ + A+SG IGG S EF+V AD GE + S D D+ E Sbjct: 181 EKAYTRVFQRCGLTAVGVDADSGAIGGAASQEFMVTADAGEDLILISPDG-DYAANQEKA 239 Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats. Identities = 73/188 (38%), Positives = 97/188 (51%), Gaps = 4/188 (2%) Query: 258 ATSDVHNEKLFDSL---PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 D+ N K D PE RGIEVGHIF G KYSL M A +GK ++ M Sbjct: 404 PAMDLRNAKAGDHCVHRPEQSLEERRGIEVGHIFQLGRKYSLSMGAQITTKEGKQEHLWM 463 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G YGIG R+ A +E HD GIIWP S+APF++ ++ D+V E+IY L Sbjct: 464 GCYGIGISRLAQAAVEQHHDDAGIIWPLSIAPFQVIVVVANVQDEVQMALGEEIYNELLA 523 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV DD GE+ G +F ADL+G P +V+VG + ++ VE+ R +S E Sbjct: 524 SGIDVLLDDRGERAGVKFKDADLIGIPWRVVVG-RAAAEGNVELVKRSERDANVLSRAEA 582 Query: 435 INYASHRF 442 I+ Sbjct: 583 ISSLLEAI 590 >gi|296110429|ref|YP_003620810.1| prolyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154] gi|295831960|gb|ADG39841.1| prolyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154] Length = 571 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 103/235 (43%), Positives = 147/235 (62%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+L+L+ G I + G++S+LPL ++ L+ + IIREE Sbjct: 1 MKQSKLLMPTLREVPADAEVKSHQLLLKAGFIRPVAAGMFSYLPLAKRVLNKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A EM VP + A+LW +SGRY +YG ++ + +R D+ I GPTHEE T + Sbjct: 61 MANIDANEMLVPEVLPAELWQKSGRYATYGPDLYKFKNRQDRDFILGPTHEETYTQLMAD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R+REF+MKDAYSF EG +++ M + Sbjct: 121 EIKSYKKLPLTVYQIQPKFRDENRPRFGLLRTREFIMKDAYSFSADQEGLDQTFHAMENA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y+ IF R+G+ + ++G +GG S EF A GE + S D+ E Sbjct: 181 YINIFDRIGISYRAIVGDAGAMGGSDSKEFSAPAAAGEDTIAYSDST-DYAANLE 234 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 58/175 (33%), Positives = 96/175 (54%), Gaps = 1/175 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 + + +GIE+GHIF GT+YS M A +G+ + MGSYGIG R+++A+ E Sbjct: 398 GKGHLIFTKGIEIGHIFKLGTRYSKAMGAQVLDENGRQTDMIMGSYGIGVSRLLSAIAEQ 457 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 D G++WP S+APF + ++ + D ++ L G +V DD E+ G + Sbjct: 458 KADDLGLVWPASIAPFDVHIVPVNMKDDEQSRVANQLETLLMAQGLEVLVDDRKERAGVK 517 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 FA ADL+G P+++ VG K + VE+K R + +M + EV++ S + ++ Sbjct: 518 FADADLIGLPIRITVGKK-AGEDIVEVKVRASNTNIEMRMSEVVDSVSVLLNGDK 571 >gi|325475063|gb|EGC78249.1| prolyl-tRNA synthetase [Treponema denticola F0402] Length = 595 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 101/271 (37%), Positives = 155/271 (57%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ ++P L+E P +A + SHKL+LR GMI + G++++LPLG KA V IIREE Sbjct: 1 MKMTQMYMPTLREIPNEAVVESHKLLLRAGMIRNLANGLFAYLPLGLKAFRKVEKIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G +E P + ++W ESGR+DS G E+LR+ +R ++ ++ PT EE T + ++ Sbjct: 61 MDAIGCLEFKPPVIVPGEIWQESGRWDSMGPELLRIKNRLNQELVVSPTAEEAFTALLKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+N P YQI K+RDE+RPR+G+MR+REF MKDAYSF + +Y + Sbjct: 121 ELSSYKNYPLLTYQINTKYRDEIRPRYGLMRTREFTMKDAYSFHTNDKSLDEAYLSFEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y++IF R GL I ++A+SG +GG S EF+V + G+ + + Sbjct: 181 YIKIFKRCGLTVIGVKADSGAMGGSGSQEFMVESSVGDDTLLLCPSCGYAANEEKAACAP 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 D N + Q +A D N K + L Sbjct: 241 DKEQGNGNMPQGSALSIEEIDTPNVKTIEDL 271 Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats. Identities = 54/181 (29%), Positives = 97/181 (53%), Gaps = 7/181 (3%) Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 ++ + +G E+GHIF G KY+ M+ T+ +GK + MG YGIG R+ A+ Sbjct: 416 KCAVCGTALYTKKGNELGHIFKLGYKYTKAMNMTYLDENGKQQHPSMGCYGIGLDRLTAS 475 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++E HD GIIWP S+APF+++++ IK ++ ++ +++Y K G + DD E+ Sbjct: 476 IVEEHHDEDGIIWPMSIAPFQVAIVPIKYEGEMQKE-ADRLYEECKKRGIEALLDDRKER 534 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN----YASHRFS 443 G +F DL+G P++++VG K + + +E K R + +V++ + Sbjct: 535 TGVKFKDMDLIGIPIRLVVGEKNLPN--IEFKLRKAVESSLVDKNKVVDLVEKTVKEELA 592 Query: 444 N 444 Sbjct: 593 K 593 >gi|305432763|ref|ZP_07401922.1| threonine--tRNA ligase [Campylobacter coli JV20] gi|304444160|gb|EFM36814.1| threonine--tRNA ligase [Campylobacter coli JV20] Length = 610 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 71/437 (16%), Positives = 147/437 (33%), Gaps = 40/437 (9%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 I + RD +L L T + G+ WL G + + ++ + G + Sbjct: 209 IEEAKKRDHRKLGTELKLFT-FDDEIGGGLPIWLSNGARLRSKLEHMLYKIHRLRGYEPV 267 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P L AD W SG Y +Y + M +++ P + I++S ++SYR+LP Sbjct: 268 RGPELLKADAWKISGHYANYKENM-YFTQIDEQEYGIKPMNCVGHIKIYQSDVRSYRDLP 326 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 F++ + R E G+ R REF DA+ F + P K ++ + Sbjct: 327 LKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCM-PSQIKEQVLEILAFVDNLMKLF 385 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 T + + D + D+ I Sbjct: 386 DFSYEMEI------------------STKPAKAIGDDEIWDTATKALKEALDEQGLKYGI 427 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 E A Y D+ K+ D+L + ++ F ++ + ++ + Sbjct: 428 DEGGGAFYGPKIDI---KITDALKRKWQCGTIQVD----FNLPERF----KLEYTDSNNE 476 Query: 309 DHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + +G+ ++ + + + I ++ Sbjct: 477 KKQPVMLHRAILGSFERFIGILTEHC------AGEFPFFIAPTAVGIVPISDSHIAYAKE 530 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 I L ++ D + E + + A+ P+ +++G + V+ V ++ R ++ Sbjct: 531 IQRALLELNIDSEVYEKNESLSKKIRTAEKQKLPMILVLGDEEVAKRSVALRDRRAKEQK 590 Query: 428 DMSLEEVINYASHRFSN 444 ++SL+E I + S Sbjct: 591 NLSLDEFIKLVKEKMSE 607 >gi|310287485|ref|YP_003938743.1| threonyl-tRNA synthetase [Bifidobacterium bifidum S17] gi|309251421|gb|ADO53169.1| threonyl-tRNA synthetase [Bifidobacterium bifidum S17] Length = 676 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 60/461 (13%), Positives = 129/461 (27%), Gaps = 54/461 (11%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L+E RD ++ L + + G+ + P G ++ + RE + Sbjct: 242 KAYQTRLEEAAKRDHRKLGAEMDLFS-FPEEIGPGLAVFHPKGAAVINAMEDYSREMHRK 300 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHE 111 + P + L+ SG Y M + P + Sbjct: 301 HHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEYDADGNITKPGADYYLKPMNC 360 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 361 PMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMK 420 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L + GL + + + S + + Sbjct: 421 DEL-TSLLTFVLNLLKDFGLSDFYLELST----------------KDPDKYVGSDEIWEE 463 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + A Y + + D++ +VS ++ F Sbjct: 464 ATRTLREVAEASHLDLVADPGGAAFYGPKI---SVQARDAIGRTWQVSTIQLD----FNL 516 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 ++ + DG + R + IE + + + Sbjct: 517 PERF----QLEYIAKDGT------HQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAP 566 Query: 351 LINIKAHDQVCRDACEKIY---ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + + V + + L D ++ G + A P +IVG Sbjct: 567 VQVLGV--PVADEFAPHLAGFVKSLEDEMVRCEIDYSDDRFGKKIRNASKSKVPFILIVG 624 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 + ++++ V + R + ++E V Sbjct: 625 EEDMNNNAVSFRFRDGSQLNGVPVDEAREKILAVIKKRAQV 665 >gi|32267225|ref|NP_861257.1| prolyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449] gi|81835913|sp|Q7VFF0|SYP_HELHP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|32263278|gb|AAP78323.1| prolyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449] Length = 588 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 116/269 (43%), Positives = 160/269 (59%), Gaps = 1/269 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F+ L+E+P+DA + SH+ ++R G I Q GIY++LPLG+K LD V I++EE Sbjct: 1 MRFSQLFVNTLKESPKDAVLKSHQYLIRGGFIQQIGSGIYNFLPLGKKLLDKVRFIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +++GA E+ + + A+LW ESGRY+ YG+E+LR DR + + GPTHEEV+T I ++ Sbjct: 61 MDKSGAQEILMGFVTPAELWRESGRYEQYGRELLRFVDRKENEFVLGPTHEEVITHIAKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDELRPRFG+MR REF+MKD YSF ++ M + Sbjct: 121 TIKSYKQLPLHLYQIHSKFRDELRPRFGLMRGREFIMKDGYSFHSNYADLNREFDVMEAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSENTDF 239 Y RI R+GL+ + A+SG IGG S EF+VLA GE + C I + Sbjct: 181 YKRILQRMGLEFKVVEADSGAIGGSGSKEFMVLAPCGEDTIVVCKGCEYGANIEASKRAP 240 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLF 268 N I AP AA + + Sbjct: 241 RTAPRPNEIKYDSNAPQAAFARFFTPDIK 269 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 96/189 (50%), Gaps = 10/189 (5%) Query: 260 SDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P+ + +GIEVGHIF G KYS M+A F DGK + MG Y Sbjct: 401 ADIAQSKEGDLCPKCAQELYYTKGIEVGHIFKLGDKYSRAMNAQFLDNDGKTQPLIMGCY 460 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G G R++ A++E D G IW V+ F I++I D V D +Y LS G Sbjct: 461 GFGISRILPAILEQKSDDLGCIWSKEVSVFDIAIIISNTKDSVQNDFGSALYEILSACGI 520 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR-------EDMS 430 DV D+ E+ G + +LLGF +IVG K +++ KVE+ R + +++ Sbjct: 521 DVLLDERDERFGVKMKDFELLGFHSALIVG-KGLNEGKVELIKREGLKKYELCATDKEIL 579 Query: 431 LEEVINYAS 439 LEE++ + Sbjct: 580 LEEILKIIA 588 >gi|15921207|ref|NP_376876.1| threonyl-tRNA synthetase [Sulfolobus tokodaii str. 7] gi|22654128|sp|Q973C8|SYT_SULTO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|15621992|dbj|BAB65985.1| 540aa long hypothetical threonyl-tRNA synthetase [Sulfolobus tokodaii str. 7] Length = 540 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 157/442 (35%), Gaps = 38/442 (8%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E D I +L L + + + G+ + GQ + + E G Sbjct: 123 YLKWLEEVSEYDHRIIGERLDLFS-FPDETAPGLALFHYKGQIIRKELMKFMEEINESMG 181 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ + + LW SG YD Y +M+ D+ + P + I++S +SY Sbjct: 182 YQEVFTAEIYRSILWKTSGHYDYYKDKMVLFK-MEDEELGLKPMNCPAHILIYKSKTRSY 240 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 ++LP F + L FR E R +G++R R F+ D + F + + + Sbjct: 241 KDLPIRFSEFGLVFRWEKRGELYGLLRVRGFVQDDGHIFLTEDQIKDEVKMLVKKTI--- 297 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + I G + + T + S + + + + +++ Sbjct: 298 -------------DVLSIFGFKGDDVRINLSTRPDESIGSDELWEKATNALVSALNELGI 344 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E+ A Y D + DSL ++S ++ F ++ + Sbjct: 345 KYIVKEKEGAFYGPKIDFD---IRDSLGRWWQLSTIQVD----FNLPERF----KLEYID 393 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + G++ A++ GK W ++P ++ ++ I D Sbjct: 394 KDGSRKRPVMIHRAIYGSIERFMAILLEHFRGKLPTW---LSPVQVRILPISKD---VED 447 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + ++L + V D E + + A G P +IVG K + KV ++ R Sbjct: 448 YALNLLSKLKENKIRVELDMSDETLSKRIKKAYDEGVPYMIIVGKKEREEGKVTVRGRNN 507 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + ++ + N Sbjct: 508 VEIRGVKFDDFLKALLEEIRNR 529 >gi|332637693|ref|ZP_08416556.1| prolyl-tRNA synthetase [Weissella cibaria KACC 11862] Length = 573 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 121/265 (45%), Positives = 166/265 (62%), Gaps = 5/265 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L+E P DAE+ SH++MLR G + S G+Y++LPL Q+ L+ +NAIIREE Sbjct: 1 MKQSKVFIPTLRETPADAEVISHQMMLRAGYMRPVSAGVYAYLPLAQRVLNKINAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + AIEMS P L A++W ESGRY++YG + +L +R+D+ MI GPTHEE MT + R Sbjct: 61 MEKIDAIEMSAPMLLPAEMWQESGRYETYGPNLFKLKNRHDRDMILGPTHEETMTTLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFGV+R REF+MKDAYSF + +G SY M + Sbjct: 121 DIKSYKRLPLTVYQIQTKFRDENRPRFGVLRGREFIMKDAYSFSVDQDGLDESYKNMESA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF- 239 Y+ IF R+GL + ++G +GG S EF A+ GE + S D+ E Sbjct: 181 YINIFDRIGLDYRVIVGDAGAMGGSDSKEFSAPAEAGEDIIAYSD-ESDYAANLEMAKDL 239 Query: 240 ---DDIISLNSIVEQWTAPYAATSD 261 + + + +E+ P T D Sbjct: 240 YTPNKSHAQMADLEKIATPEVKTID 264 Score = 146 bits (367), Expect = 9e-33, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 96/172 (55%), Gaps = 1/172 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 + +GIE+GHIF GT+YS M A A+G+ V MGSYGIG R++AA+ E Sbjct: 396 GKGHLKFTKGIEIGHIFKLGTRYSKSMGAQVLDANGRQADVIMGSYGIGVSRLLAAIAEQ 455 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 + D G+ WP SVAP+ + L+ +K D+ R +++ +L + G +V DD E+ G + Sbjct: 456 NADENGLAWPTSVAPWDVHLVPMKYSDETQRALTDELNDKLVEAGYEVLVDDRNERAGVK 515 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 F +DL+G P++V +G K + VE+K R ++ EE+++ Sbjct: 516 FNDSDLIGLPVRVTIGKK-AGEGIVEVKLRKADEAIEVRTEELVSTLQILLQ 566 >gi|254411303|ref|ZP_05025080.1| threonyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420] gi|196181804|gb|EDX76791.1| threonyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420] Length = 609 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 62/449 (13%), Positives = 146/449 (32%), Gaps = 38/449 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + RD L L + G+ W P G + +++EQ Sbjct: 190 LTEYKRRKQEALKRDHRKLGKDLGLFI-LSDPVGPGLPLWTPKGTILRSTLEDFLKQEQI 248 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSH 121 + G + P + +L+ SG + Y +++ + ++ + + I++ Sbjct: 249 KRGYQPVVTPHIGRVELFKTSGHWQKYKEDLFPMMGESEAEGFVLKAMNCPFHVQIYKHE 308 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 ++SYR+LP + +R E G + +D +TPE + ++ Sbjct: 309 LRSYRDLPMRLAEFGTVYRYEQSGELGGLTRVRGFTQDDAHLFVTPEQLDDEFLRVVDLT 368 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L +F+ LGL+ R D + + S + + + + Sbjct: 369 LSVFNTLGLQDFKARLS--------------FRDPSQDKYIGSDEAWNKSENAIRRAVET 414 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + A Y D D+L ++ ++ + Sbjct: 415 LGMGHFEGIGEAAFYGPKLDFM---FHDALDREWQLGTVQVDYNLP--------ERFNLE 463 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + DG + G++ + ++ + G W + Sbjct: 464 YVAEDGTRQRPVMIHRAPFGSLERLIGILIEEYAGDFPFW------LAPVQARLLPVSDE 517 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 +++ ++ VG V D G+++ + P+ +VG+K V + + ++ Sbjct: 518 QLTFAKEVAQKMRLVGVRVEVDTSGDRLPKMIRNGEKAKIPVMAVVGAKEVESNSLSVRI 577 Query: 421 RLTGIR----EDMSLEEVINYASHRFSNN 445 R G + + + +V+ +N Sbjct: 578 REAGKQSQDLGAIPVAQVLERMESAIANR 606 >gi|296139421|ref|YP_003646664.1| prolyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162] gi|296027555|gb|ADG78325.1| prolyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162] Length = 585 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 97/245 (39%), Positives = 143/245 (58%), Gaps = 1/245 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ SHKL++R G + + + G+YSWLPLG + L NV ++REE Sbjct: 4 RFSQLFLRTLRDDPADAEVPSHKLLVRAGYVRRIAPGVYSWLPLGLRVLRNVEHVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ +P L + + + R+ YG + RL DR M+ GPTHEE+ + Sbjct: 64 NAIGGQEILLPALLPREPYETTNRWTEYGDSLFRLQDRKGADMMLGPTHEEIFALTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSFD + EG +Y K +Y Sbjct: 124 YNSYKDLPVILYQIQNKYRDEERPRAGILRGREFVMKDSYSFDTSDEGLSEAYAKHRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF RL ++ + + A SG +GG S EF+ ++ GE + D+ E Sbjct: 184 QRIFARLAIEHVIVSATSGAMGGSASEEFLAVSPVGE-DTYVHSTESDYAANVEAVVTPA 242 Query: 242 IISLN 246 ++ Sbjct: 243 PPAIP 247 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 65/176 (36%), Positives = 92/176 (52%), Gaps = 4/176 (2%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D+ P+ + VSARGIE+GHIF G KY+ G +GK + G Sbjct: 400 GTIEAAEVRDGDASPDGRGTLVSARGIEIGHIFQLGRKYTDAFEVDVLGENGKPVRLTQG 459 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VA + E HD KG+ WP VAPF + + I D+ E + A L Sbjct: 460 SYGIGVSRLVAVIAEQQHDDKGLRWPKGVAPFDVH-VVIANKDEGAWTGAESLAAELDAA 518 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 G V DD G +F ++LLG P V+VG + +D VE++ RLTG ++ + Sbjct: 519 GLQVLLDDRKASPGIKFKDSELLGVPTVVVVG-RGWADGVVELRDRLTGESREIPV 573 >gi|118617676|ref|YP_906008.1| prolyl-tRNA synthetase [Mycobacterium ulcerans Agy99] gi|152112934|sp|A0PQB8|SYP_MYCUA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|118569786|gb|ABL04537.1| prolyl-tRNA synthetase ProS [Mycobacterium ulcerans Agy99] Length = 582 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 99/259 (38%), Positives = 146/259 (56%), Gaps = 1/259 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ SHKL++R G I G+YSWLPLG + L N+ +IREE Sbjct: 4 RMSELFLRTLRDDPADAEVPSHKLLIRAGYIRPVGPGLYSWLPLGLRVLRNIERVIREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 64 NAIGGQEILFPALLPRAPYETTNRWTEYGDGVFRLEDRRGNDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ+K+RDE RPR G++R+REF+MKD+YSFD+ G K +Y+ +Y Sbjct: 124 YNSYKDFPLTLYQIQIKYRDEARPRAGILRAREFVMKDSYSFDIDSGGLKAAYHAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGET-QVFCSKDFMDFPIPSENTDFD 240 RIF RL ++ + + A SG +GG S EF+ + GE V C + + + T Sbjct: 184 QRIFDRLRVRYVIVSAVSGAMGGSASEEFLAESPVGEDTFVRCVESGYAANVEAVVTARP 243 Query: 241 DIISLNSIVEQWTAPYAAT 259 + + ++ + T Sbjct: 244 ESLPIDGQPDAVVHDTGET 262 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 95/189 (50%), Gaps = 5/189 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ + V ARGIE+GHIF G KY+ +A G DGK + MG Sbjct: 395 GTIEAAEVREGDPAPDGAGQLVMARGIEIGHIFQLGRKYTDAFTADVLGEDGKPVRLTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VA + E HD G+ WP +APF + L I D R + L + Sbjct: 455 SYGIGVSRLVAVIAEQHHDNLGLRWPAEIAPFGVHL-VIANKDAEARAGAIGLAGELDGL 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL-EEV 434 G +V DD G +F A+LLG P V+VG + +D VE++ R G ++++ + + Sbjct: 514 GVEVLLDDRQASPGVKFKDAELLGMPWVVVVG-RGWADGVVELRDRFGGQTRELTVGDSL 572 Query: 435 INYASHRFS 443 + S Sbjct: 573 ATDIAAAIS 581 >gi|329769169|ref|ZP_08260589.1| prolyl-tRNA synthetase [Gemella sanguinis M325] gi|328839388|gb|EGF88966.1| prolyl-tRNA synthetase [Gemella sanguinis M325] Length = 566 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 125/411 (30%), Positives = 187/411 (45%), Gaps = 35/411 (8%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ F+P +E P AE SHKL+++ GM+ Q S G+Y++LPL K + N+ +IR+E Sbjct: 1 MRQSRTFIPTTREVPSSAEAISHKLLIKAGMVKQVSAGVYTYLPLATKVIQNIEKVIRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P LQS D W +SGR+ G E++R+ DR + PT EEV+ + Sbjct: 61 HAKIGASELLMPILQSEDYWKQSGRWYKMGDELIRVTDRKNAGYALSPTAEEVICQTVSN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPR G++R +EF+MKD YSF +PE + +YN + + Sbjct: 121 MVTSYKQLPVNLYQIQTKFRDEIRPRLGLLRGKEFIMKDGYSFHDSPESLRETYNDYYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----- 235 Y IF R LK ++A+SG IGG +HEF LA+ GE + ++ D+ E Sbjct: 181 YSNIFDRFELKYRAVKADSGNIGGSYTHEFQALAEVGEDTIVYTE-ESDYAANIETAAVV 239 Query: 236 --------NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL-----PENKRVSARGI 282 + + + L + +Q AA V + +L E V RG Sbjct: 240 EQNYTMPTDYEKKERSLLETPNQQTIDDIAAYCGVEVNRAMKALALKADGEFYLVLMRGN 299 Query: 283 EV--GHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 + F T S AT + + G VI + Sbjct: 300 DQLNDIKFMKATGTSEVEMATEQEIEEVMGSAVGYMGPFGI--KNCKVIGDNAIKYMYNH 357 Query: 341 PDSVAPFKISLINIKAHDQVCRDACE-------KIYARLS-----KVGCDV 379 IN+ D + + LS G +V Sbjct: 358 SCGANKKGFHYINVNPGDYEVDAYYDLRMIEEGDLAEDLSGPVKFAKGIEV 408 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 65/165 (39%), Positives = 99/165 (60%), Gaps = 1/165 (0%) Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 A+GIEVG +F G YS M T+ A+G+ ++ MG YGIG RV++A+IE + Sbjct: 398 GPVKFAKGIEVGQVFELGKGYSESMDITYLDANGRANHFYMGCYGIGVSRVISAIIEQHN 457 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 D GIIWP V P+++ L+ + + E++Y +L++ G +V +DD E+ G +F Sbjct: 458 DENGIIWPKEVTPYQVHLVCVDIKKEEQVKQSEELYKQLTEAGYEVLYDDRAERAGVKFN 517 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 ADL+G PLQV+VG K V D VE+K R T + D +E+V++ Sbjct: 518 DADLIGIPLQVVVGKK-VGDGIVEVKERKTLEKVDTKVEDVLSKV 561 >gi|183981901|ref|YP_001850192.1| prolyl-tRNA synthetase ProS [Mycobacterium marinum M] gi|183175227|gb|ACC40337.1| prolyl-tRNA synthetase ProS [Mycobacterium marinum M] Length = 582 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 99/259 (38%), Positives = 146/259 (56%), Gaps = 1/259 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+++P DAE+ SHKL++R G I G+YSWLPLG + L N+ +IREE Sbjct: 4 RMSELFLRTLRDDPADAEVPSHKLLIRAGYIRPVGPGLYSWLPLGLRVLRNIERVIREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ P L + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 64 NAIGGQEILFPALLPRAPYETTNRWTEYGDGVFRLQDRRGNDYLLGPTHEELFTLTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQIQ+K+RDE RPR G++R+REF+MKD+YSFD+ G K +Y+ +Y Sbjct: 124 YNSYKDFPLTLYQIQIKYRDEARPRAGILRAREFVMKDSYSFDIDSGGLKAAYHAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGET-QVFCSKDFMDFPIPSENTDFD 240 RIF RL ++ + + A SG +GG S EF+ + GE V C + + + T Sbjct: 184 QRIFDRLRVRYVIVSAVSGAMGGSASEEFLAESPVGEDTFVRCVESGYAANVEAVVTARP 243 Query: 241 DIISLNSIVEQWTAPYAAT 259 + + ++ + T Sbjct: 244 ESLPIDGQPDAVVHDTGET 262 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 96/189 (50%), Gaps = 5/189 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ + V ARGIE+GHIF G KY+ +A G DGK + MG Sbjct: 395 GTIEAAEVREGDPAPDGAGQLVMARGIEIGHIFQLGRKYTDAFTADVLGEDGKPVRLTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VA + E HD G+ WP +APF + L I D R + + L + Sbjct: 455 SYGIGVSRLVAVIAEQHHDNLGLRWPAEIAPFGVHL-VIANKDAEARAGAIGLASELDGL 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL-EEV 434 G +V DD G +F A+LLG P V+VG + +D VE++ R G ++++ + + Sbjct: 514 GVEVLLDDRQASPGVKFKDAELLGMPWVVVVG-RGWADGVVELRDRFGGQTRELTVGDSL 572 Query: 435 INYASHRFS 443 + S Sbjct: 573 ATDIAAAIS 581 >gi|300173485|ref|YP_003772651.1| prolyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811] gi|299887864|emb|CBL91832.1| Prolyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811] Length = 571 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 102/235 (43%), Positives = 147/235 (62%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+L+L+ G I + G++S+LP+ ++ L+ + IIREE Sbjct: 1 MKQSKLLMPTLREIPADAEVKSHQLLLKAGFIRPVAAGMFSYLPMAKRVLNKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N A EM VP + A+LW +SGRY++YG + + +R D+ I GPTHEE T + Sbjct: 61 MNAIDANEMLVPEILPAELWEKSGRYETYGPALYKFKNRQDRDFILGPTHEETFTQLMSD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE RPRFG++R+REF+MKDAYSF G +++ M + Sbjct: 121 DIKSYKKLPLVVYQIQPKFRDENRPRFGLLRTREFIMKDAYSFSADQAGLDQAFHNMETA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y++IF R+GL + ++G +GG S EF A GE + S D+ E Sbjct: 181 YIKIFDRIGLSYRAIVGDAGAMGGSDSKEFSAPAAAGEDIIAYSD-ATDYAANLE 234 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 62/175 (35%), Positives = 99/175 (56%), Gaps = 1/175 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 + + V GIE+GHIF GT+YS + A +G+ + MGSYGIG R+++A++E Sbjct: 398 GKGQLVFTPGIEIGHIFKLGTRYSKVLGAQVLNENGRQTDMIMGSYGIGVSRLLSAIVEQ 457 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 D G+IWP +VAPF + ++ + D ++ L+ G +V DD E+ G + Sbjct: 458 KADADGLIWPANVAPFDVHIVPVNIKDADQVRVAGQLETLLTTQGLEVLVDDRKERAGVK 517 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 FA ADL+G P+++ VG K S+ VE+K R + +M L EV++ S S ++ Sbjct: 518 FADADLIGLPIRITVGKK-ASEDIVEVKVRASNTNIEMRLSEVVDSVSVLLSGDK 571 >gi|42519365|ref|NP_965295.1| prolyl-tRNA synthetase [Lactobacillus johnsonii NCC 533] gi|81832202|sp|Q74IS2|SYP_LACJO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|41583653|gb|AAS09261.1| prolyl-tRNA synthetase [Lactobacillus johnsonii NCC 533] Length = 565 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 115/282 (40%), Positives = 154/282 (54%), Gaps = 1/282 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SH+LMLR G I Q + G+Y++LPLG + L II EE Sbjct: 1 MRQSKFFMPTLKEAPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLGYRVLRKAENIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MDNINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLQDRHGRESLLGPTHEETFTEIVAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDEQFDDQKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+IF+R G+ P+ A+SG +GG S EF A GE + ++ + E Sbjct: 181 YLKIFNRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNEKGT-YAANLEMAKSI 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 D + A A EKL D L + I Sbjct: 240 DTFKQEPEEAKDLAKVATPGMDTIEKLADFLKVPSTRIVKSI 281 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 65/192 (33%), Positives = 93/192 (48%), Gaps = 2/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A NE D + IEVGHIF GT Y+ M A F +GK Sbjct: 375 DFKVDEFADIRTANEGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTDTMGADFLDNNGKAK 434 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V MGSYGIG R+++A +E GI WP +APF I LI +K D+ EK+ Sbjct: 435 PVIMGSYGIGVTRMLSAAVEQHLTENGIAWPKEIAPFAIHLIQMKMKDETQTKLAEKLEK 494 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 LS DV +DD E+ G +F ADL+G PL++ +G K D VE+K + +++ Sbjct: 495 ELSAK-YDVLYDDRNERPGVKFNDADLVGAPLRITIGRK-AKDGIVEVKRPMDEKATEVN 552 Query: 431 LEEVINYASHRF 442 + ++ + Sbjct: 553 ISDLDAVITKEL 564 >gi|268319258|ref|YP_003292914.1| hypothetical protein FI9785_773 [Lactobacillus johnsonii FI9785] gi|262397633|emb|CAX66647.1| proS [Lactobacillus johnsonii FI9785] Length = 565 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 115/282 (40%), Positives = 154/282 (54%), Gaps = 1/282 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SH+LMLR G I Q + G+Y++LPLG + L II EE Sbjct: 1 MRQSKFFMPTLKEAPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLGYRVLRKAENIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MDNINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLQDRHGRESLLGPTHEETFTEIVAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDEQFDDQKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+IF+R G+ P+ A+SG +GG S EF A GE + ++ + E Sbjct: 181 YLKIFNRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNEKGT-YAANLEMAKSI 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 D + A A EKL D L + I Sbjct: 240 DTFKQEPEEAKDLAKVATPGMDTIEKLADFLKVPSTRIVKSI 281 Score = 146 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 65/192 (33%), Positives = 94/192 (48%), Gaps = 2/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A NE D + IEVGHIF GT Y+ M A F +GK Sbjct: 375 DFKVDEFADIRTANEGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTDTMGADFLDNNGKAK 434 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V MGSYGIG R+++A +E GI WP +APF I LI +K D+ + EK+ Sbjct: 435 PVIMGSYGIGVTRMLSAAVEQHLTENGIAWPKEIAPFAIHLIQMKMKDETQTELAEKLEK 494 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 LS DV +DD E+ G +F ADL+G PL++ +G K D VE+K + +++ Sbjct: 495 ELSAK-YDVLYDDRNERPGVKFNDADLVGAPLRITIGRK-AKDGIVEVKRPMDEKATEVN 552 Query: 431 LEEVINYASHRF 442 + ++ + Sbjct: 553 ISDLDAVITKEL 564 >gi|329667116|gb|AEB93064.1| prolyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026] Length = 565 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 115/282 (40%), Positives = 154/282 (54%), Gaps = 1/282 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SH+LMLR G I Q + G+Y++LPLG + L II EE Sbjct: 1 MRQSKFFMPTLKEAPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLGYRVLRKAENIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MDNINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLQDRHGRESLLGPTHEETFTEIVAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDEQFDDQKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+IF+R G+ P+ A+SG +GG S EF A GE + ++ + E Sbjct: 181 YLKIFNRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNEKGT-YAANLEMAKSI 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 D + A A EKL D L + I Sbjct: 240 DTFKQEPEEAKDLAKVATPGMDTIEKLADFLKVPSTRIVKSI 281 Score = 146 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 65/192 (33%), Positives = 94/192 (48%), Gaps = 2/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A NE D + IEVGHIF GT Y+ M A F +GK Sbjct: 375 DFKVDEFADIRTANEGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTDTMGADFLDNNGKAK 434 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V MGSYGIG R+++A +E GI WP +APF I LI +K D+ + EK+ Sbjct: 435 PVIMGSYGIGVTRMLSAAVEQHLTENGIAWPKEIAPFAIHLIQMKMKDETQTELAEKLEK 494 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 LS DV +DD E+ G +F ADL+G PL++ +G K D VE+K + +++ Sbjct: 495 ELSAK-YDVLYDDRNERPGVKFNDADLVGAPLRITIGRK-AKDGIVEVKRPMDEKATEVN 552 Query: 431 LEEVINYASHRF 442 + ++ + Sbjct: 553 ISDLDAVITKEL 564 >gi|116629465|ref|YP_814637.1| prolyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323] gi|282850819|ref|ZP_06260193.1| proline--tRNA ligase [Lactobacillus gasseri 224-1] gi|311110887|ref|ZP_07712284.1| proline--tRNA ligase [Lactobacillus gasseri MV-22] gi|122273597|sp|Q044C3|SYP_LACGA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116095047|gb|ABJ60199.1| Prolyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323] gi|282557771|gb|EFB63359.1| proline--tRNA ligase [Lactobacillus gasseri 224-1] gi|311066041|gb|EFQ46381.1| proline--tRNA ligase [Lactobacillus gasseri MV-22] Length = 565 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 109/265 (41%), Positives = 148/265 (55%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SH+LMLR G I Q + G+Y++LPLG + L II EE Sbjct: 1 MRQSKFFMPTLKEAPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLGYRVLRKAENIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MNNINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLQDRHGRESLLGPTHEETFTEIVAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDEQFDDQKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+IF+R G+ P+ A+SG +GG S EF A GE + ++ D Sbjct: 181 YLKIFNRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNEKGTYAANLEMAKSID 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 ++ T D ++ Sbjct: 241 TFKQDPEDAKELTKVATPGMDTIDK 265 Score = 146 bits (369), Expect = 6e-33, Method: Composition-based stats. Identities = 64/192 (33%), Positives = 93/192 (48%), Gaps = 2/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A NE D + IEVGHIF GT Y+ M A F +GK Sbjct: 375 DFKVDEFADIRTANEGELDPVDHLPLKFTTSIEVGHIFKLGTYYTKTMGADFLDNNGKAK 434 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V MGSYGIG R+++A +E GI WP +APF + LI +K D+ + EK+ Sbjct: 435 PVIMGSYGIGVTRMLSAAVEQHLTENGIAWPKEIAPFDVHLIQMKMKDEAQTELAEKLEK 494 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 LS DV +DD E+ G +F ADL+G PL++ +G K D VE+K +++ Sbjct: 495 ELSTK-YDVLYDDRNERPGVKFNDADLVGAPLRITIGRK-AKDGIVEVKRPTDEKAMEVN 552 Query: 431 LEEVINYASHRF 442 + ++ + Sbjct: 553 ISDLDAMITKEL 564 >gi|121612820|ref|YP_999926.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176] gi|166223331|sp|A1VXT5|SYT_CAMJJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|87250382|gb|EAQ73340.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176] Length = 602 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 71/444 (15%), Positives = 150/444 (33%), Gaps = 40/444 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y I + RD +L L T + G+ WL G + + ++ + Sbjct: 194 LKEYLTIIEEAKKRDHRKLGTELKLFT-FDDEIGGGLPIWLSNGARLRSKLEHMLYKIHR 252 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P L AD W SG Y +Y + M +++ P + I++S + Sbjct: 253 LRGYEPVRGPELLKADAWKISGHYANYKENM-YFTQIDEQEYGIKPMNCVGHIKIYQSDV 311 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LP F++ + R E G+ R REF DA+ F + P K ++ Sbjct: 312 RSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCM-PSQIKEQVLEILAFV 370 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + T + + + + ++ Sbjct: 371 DNLMKLFDFSYEMEI------------------STKPEKAIGDDEIWEIATKALKEALNE 412 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ K+ D+L + ++ F +++ Sbjct: 413 QGLKYGIDEGGGAFYGPKIDI---KITDALKRKWQCGTVQVD----FNLPSRF----KLE 461 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +D + + +G+ ++ + + + I + Sbjct: 462 YTDSDNEKKQPVMLHRAILGSFERFIGILTEHC------AGEFPFFIAPTAVGIVPIGEA 515 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ++I L ++ D + E + + +A+ P+ +++G V V ++ Sbjct: 516 HIAYAKEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVVKRSVALRD 575 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R ++++SL+E I + S Sbjct: 576 RRAKEQKNLSLDEFIKLVKEKMSE 599 >gi|327314606|ref|YP_004330043.1| threonine--tRNA ligase [Prevotella denticola F0289] gi|326946255|gb|AEA22140.1| threonine--tRNA ligase [Prevotella denticola F0289] Length = 649 Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats. Identities = 78/450 (17%), Positives = 151/450 (33%), Gaps = 38/450 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L + KG+ WLP G + + ++R Sbjct: 232 EYLVMLEEAKKRDHRKIGKEMELFM-FSDRVGKGLPIWLPKGTQLRLRLQDLLRRLLRPY 290 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + +L+V SG Y YGK+ + D+ + P + +++ Sbjct: 291 NYQEVITPGIGGKNLYVTSGHYAHYGKDSFQPIHTPEEDEEYMLKPMNCPHHCEVYAYKP 350 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + FR E G+ R R F DA+ F + + Sbjct: 351 RSYKDLPLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPEQVKTE-FETNIDII 409 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L++F G + + D + + + D + + + Sbjct: 410 LKVFKTFGFDNYEAQISLR--------------DPNDKEKYIGSDEVWEESEAAIKQACE 455 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + VE A Y D + D++ ++ ++ F Sbjct: 456 EKGLKARVELGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLPNRF--------KL 504 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D + G++ AV+ G +W + I + Sbjct: 505 EYTAEDNSKKTPVMIHRAPFGSLERFTAVLIEHTAGHFPLW------LTPDQVAILPISE 558 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D K+ A L DD E+IG + +L P VIVG K ++ V ++ Sbjct: 559 KYNDYAFKVKAYLDAHDLRSIMDDRNEKIGRKIRDNELKRVPYMVIVGEKEAAEGLVSMR 618 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNRPVL 449 + G + M++E + ++ L Sbjct: 619 QQGGGEQATMTMEAFAERINAEVADQLKTL 648 >gi|42560810|ref|NP_975261.1| threonine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492306|emb|CAE76903.1| threonine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301321098|gb|ADK69741.1| threonine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 639 Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats. Identities = 75/436 (17%), Positives = 156/436 (35%), Gaps = 37/436 (8%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD + + L + G G+ WLP G + + +R+++ I + P + Sbjct: 236 RDHRLINKTLNIF-GFDQLVGAGLPLWLPNGFIVKNEIEKYLRQKEWEYDYIPVETPPIG 294 Query: 76 SADLWVESGRYDSYGKEMLRLADR---NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + +L+ SG +D YG++M + + +D+ I P + +++ +SYR+LP Sbjct: 295 TVELYKTSGHWDHYGEDMFQPFNGGKGSDEQFILRPMNCPHHIAVYKQEQRSYRDLPLRI 354 Query: 133 YQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 + ++ R E G+ R R + D++ F + + R K Sbjct: 355 CEHAIQHRFESSGSLTGLERVRGMKLTDSHIFVRSDQIEDEF-------------RSTYK 401 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDIISLNSIVE 250 I + I D + L D + F D D S D+ Sbjct: 402 LISEVLNTFNIQIDYLS--LSLRDPNDKVKFYKDDLMWDKAESSLEKVLIDLGLKYEKRI 459 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D+ ++ + VS ++ F T+ D K Sbjct: 460 GDAAFYGPKLDI---QIKTAQNHEITVSTIQLDFLMPNKFD--------LTYIDKDQKLV 508 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 M G + I + + + P + P ++ +I I + + I+ Sbjct: 509 RPIMIHR--GLIGTYERFIATLLEQTKGVLPLWLVPKQVEIIPI---SESNLEYANLIHQ 563 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +L K D E++ + A P Q+++G+K V ++ + + + + +S Sbjct: 564 KLKKEFIRSHIDLRDERLSYKIRDAQTKKVPYQLVLGNKEVENNTITYRQYGSEKQITIS 623 Query: 431 LEEVINYASHRFSNNR 446 ++E ++ + + + Sbjct: 624 IQEFVDMLKQQIKDKK 639 >gi|227503501|ref|ZP_03933550.1| threonyl-tRNA synthetase [Corynebacterium accolens ATCC 49725] gi|227076004|gb|EEI13967.1| threonyl-tRNA synthetase [Corynebacterium accolens ATCC 49725] Length = 687 Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats. Identities = 61/448 (13%), Positives = 135/448 (30%), Gaps = 47/448 (10%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD +L L + + G + P G + R + G ++ Sbjct: 260 EEAEKRDHRRLGQELDLFS-FPDEIGSGFPVFHPNGATVRMEMENHSRNRHVQAGYSFVN 318 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRND------------KAMIYGPTHEEVMTDIF 118 P + DL+ +SG D Y M + + P + + IF Sbjct: 319 TPHITKGDLFRKSGHLDFYSDGMFPPMQLDGEYDAEGNTVKEPQDYYAKPMNCPMHNLIF 378 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 S +SYR LP ++ +R E G+ R+R F DA+ + + + ++ Sbjct: 379 ASRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTEEQLEEEL-TQV 437 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 + + GL + + + S + + + Sbjct: 438 LDFIISLLEDYGLSDFYLELST----------------KDPNKFVGSDEIWERSTAILQS 481 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + + A Y + + D++ ++S ++ F ++ L Sbjct: 482 VAEKSGLELVPDPEGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FNLPERFELE 534 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 +A+ K + + G++ V+ + G W I + Sbjct: 535 YTAS---DGTKKRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVMGIPVA----- 586 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 E + A+L + G D +++ + P ++ G++ V V Sbjct: 587 -DDFVPHLEGVAAKLRRKGIRADVDTSDDRMQKKIRNHTTGKVPFMLVAGARDVEAGAVS 645 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 + + ++E + S + Sbjct: 646 FRFLDGTQVNGVPVDEAVELISTWVAER 673 >gi|315124065|ref|YP_004066069.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315017787|gb|ADT65880.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 508 Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats. Identities = 112/271 (41%), Positives = 159/271 (58%), Gaps = 4/271 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 1 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 61 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 121 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ E Sbjct: 181 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICENC-DYAANVEAA--- 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 E+ A YA+ N K DSL Sbjct: 237 KRAKKTCQDERPEANYASKFHTPNIKTIDSL 267 Score = 87.9 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 5/162 (3%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS---DVHNEKLFDSLPEN--KRVSA 279 ++DF + +E + + D+ K D + K + Sbjct: 346 DFYIDFELENEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLIEVKEGDCCVKCGAKLKQS 405 Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE++HD KG I Sbjct: 406 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEANHDEKGCI 465 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 W ++APF + +I D+ + K+Y L+ +G +V Sbjct: 466 WNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLL 507 >gi|161760548|ref|NP_907033.2| threonyl-tRNA synthetase [Wolinella succinogenes DSM 1740] Length = 602 Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats. Identities = 75/441 (17%), Positives = 149/441 (33%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD ++ L G+ WLP G + + A++ E R Sbjct: 197 YLHQMEEAKKRDHRKVGTEMGLFI-FDEDVGAGLPIWLPAGARLRRRLEAMLTEAHIRRN 255 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +DLW SG Y +Y + M ++ P + ++ S ++SY Sbjct: 256 YEPVRGPEILKSDLWKISGHYQNYKENM-YFTKIDEVEYGIKPMNCVGHIKVYGSGVRSY 314 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP FY+ + R E G++R REF DA+ F + + + +I Sbjct: 315 RELPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCRPEQIKDEVVDIVH-FVDKI 373 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G T + + + + + Sbjct: 374 MSAFGFNYEMEI------------------STRPEKSIGDEAIWEKGTQALKEALEAQGL 415 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D++ + I++ + Sbjct: 416 QYGIDEGGGAFYGPKIDI---KITDAIGRKWQCGTVQIDMNLP--------ERFELAYTD 464 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + +G+ A++ G+ + +AP ++++ I + + Sbjct: 465 ENNTPQRPVMIHRAILGSFERFVAILTEHFGGEFPFF---IAPTPVAIVPIG---EEQLE 518 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L KVG D E + + + P+ V++G + V++ KV I+ R Sbjct: 519 YAKHLRLELQKVGVYAEIHDKNETLNKKIRTVEKQRVPMIVVLGEREVNEKKVAIRDRRE 578 Query: 424 GIREDMSLEEVINYASHRFSN 444 + ++ E I A + S Sbjct: 579 KRQYELGEAEFIQLAKEKMSE 599 >gi|319442178|ref|ZP_07991334.1| threonyl-tRNA synthetase [Corynebacterium variabile DSM 44702] Length = 697 Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats. Identities = 66/454 (14%), Positives = 139/454 (30%), Gaps = 48/454 (10%) Query: 7 FLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + +L + RD +L L + + G + P G + R +G Sbjct: 265 YQTMLAEAEKRDHRRLGSELDLFS-FPDEIGSGFPVFHPDGATVRMEMEEHSRRRHIASG 323 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK------------AMIYGPTHEEV 113 ++ P + DL+ +SG D Y M +++ P + + Sbjct: 324 YSFVNTPHITKGDLFKKSGHLDWYADGMFPAMKLDEERDADGNITKQAVDYYAKPMNCPM 383 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IF S +SYR LP ++ +R E G+ R+R F DA+ + T + + Sbjct: 384 HNLIFASRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYC-TEDQLEV 442 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 + + + GL + + + S + + Sbjct: 443 ELTTVLEFIISLLKDYGLDDFYLELST----------------KDPKKFVGSDEVWEKAT 486 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + + A Y + + D++ ++S ++ F Sbjct: 487 NTLRAVAEKSGLELVPDPEGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FNLPE 539 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 ++ L +A+ K V + G++ V+ + G W I + Sbjct: 540 RFDLEYTAS---DGTKQRPVMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVTGIPVA 596 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 E++ A L G D +++ + P ++VG + V Sbjct: 597 ------DEFIPYLEEVTAELRGHGIRAAVDTSDDRMQKKIRNHTTGKVPFMLLVGGRDVE 650 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 V + + E+ + + S+ R Sbjct: 651 AGAVSFRFLDGTQVNGVPKEDAVRIIAEWVSSRR 684 >gi|225619417|ref|YP_002720643.1| prolyl-tRNA synthetase [Brachyspira hyodysenteriae WA1] gi|254782887|sp|C0QY98|SYP_BRAHW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|225214236|gb|ACN82970.1| prolyl-tRNA synthetase [Brachyspira hyodysenteriae WA1] Length = 578 Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats. Identities = 114/251 (45%), Positives = 163/251 (64%), Gaps = 1/251 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK F+P L+E P DA IAS+KLMLR + + S G+YS+LPLG + L+ ++ IIREE Sbjct: 1 MRLSKLFMPTLKEAPSDAIIASNKLMLRAALARKISNGLYSYLPLGVRVLNKISNIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G+ E +P L S +L SGR++ + KE+ RL DRND M GPTHEE T ++ Sbjct: 61 MDAIGSNECIMPILVSKELLTPSGRWERFKKELFRLKDRNDVDMAMGPTHEEAFTITAQN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY++ P T YQI KFRDE+RPRFGV+RS+EF MKDAYSF +T E +YN M + Sbjct: 121 EIQSYKDFPLTLYQIHTKFRDEIRPRFGVIRSKEFTMKDAYSFHITKECLDKTYNDMSGA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+GL ++ ++A+SG +GG+ S EF+VL++ GE + D+ E + Sbjct: 181 YTKIFKRMGLDTVSVKADSGAMGGEGSEEFMVLSEVGEETIIFCSKC-DYRANVEKANVK 239 Query: 241 DIISLNSIVEQ 251 + + S ++ Sbjct: 240 EEEAAKSYTDK 250 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 9/197 (4%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 D K D P+ +G+E+GHIF G KY+ + + K+ MG Sbjct: 381 VWGDFRTAKEGDRCPQCGETLYQKKGLELGHIFKLGDKYTEAFNFKVLDENNKEITPIMG 440 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R +A+VIE ++D KGII+P SVAP++ ++ I + E+IY L+ + Sbjct: 441 CYGIGVNRALASVIEQNYDDKGIIFPISVAPYEAIVVAIDKETEDSFKKAEEIYNTLNSI 500 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G + +DD E++G + DL+G P+++IVG K + VE K R + ++ +E++I Sbjct: 501 GVETMFDDRKERLGVKLNDCDLIGIPIRIIVGKKSLQKGVVEFKLRKSQESVEVKVEDII 560 Query: 436 NYAS-------HRFSNN 445 Y + ++ Sbjct: 561 EYVKTKKQELFNEINSR 577 >gi|307747462|gb|ADN90732.1| Prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1] gi|315931738|gb|EFV10693.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327] Length = 568 Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats. Identities = 113/271 (41%), Positives = 159/271 (58%), Gaps = 4/271 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G I Q G+Y++LPLG++ LD + I++EE Sbjct: 1 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFIEQIGSGLYNFLPLGKRVLDKIKNIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 61 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 121 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ E Sbjct: 181 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICENC-DYAANVEAA--- 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 E+ A YA+ N K DSL Sbjct: 237 KRAKKTCQDERPEANYASKFHTPNIKTIDSL 267 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 65/223 (29%), Positives = 110/223 (49%), Gaps = 6/223 (2%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS---DVHNEKLFDSLPEN--KRVSA 279 ++DF + +E + + D+ K D + K + Sbjct: 346 DFYIDFELENEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLIEVKEGDCCAKCGAKLKQS 405 Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE+SHD KG I Sbjct: 406 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEASHDEKGCI 465 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W ++APF + +I D+ + K+Y L+ +G +V DD E+ G + +L+G Sbjct: 466 WNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMNDFELMG 525 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 FP +++G K + ++++E+ R ++E + +E++ + Sbjct: 526 FPYALVIG-KGLENNEIELIQREGLVKELIKTDELMEILKKKV 567 >gi|301089746|ref|XP_002895146.1| threonyl-tRNA synthetase [Phytophthora infestans T30-4] gi|262101719|gb|EEY59771.1| threonyl-tRNA synthetase [Phytophthora infestans T30-4] Length = 744 Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats. Identities = 85/442 (19%), Positives = 150/442 (33%), Gaps = 38/442 (8%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ K+F + RD L H S G WLP G + IRE+ Sbjct: 332 MKEWKHFQA--EAAKRDHRRLGVSEELF--FFHSLSPGSGFWLPHGSAIYFKLLKFIREQ 387 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G E+ P + + +LW SG Y + M + D + P + + +F Sbjct: 388 YRARGYTEIITPNIYNMELWNISGHAQHYKENMF-VFDVEGQEYALKPMNCPAASLMFDF 446 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SYR LP + R+EL G+ R R F DA+ F + K F+ Sbjct: 447 RQRSYRELPIRLADCGVLHRNELSGALTGLTRVRRFQQDDAHIFCRDDQIKKE--VLDFL 504 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++++ + + + + P E A+T ++ D Sbjct: 505 TFMKYVYDVFGIEFNLELSTRPEKAMGELEQWERAETQL---------------AQALDE 549 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + A Y D+ + D+L + + ++ F +++L Sbjct: 550 FVGAGKWVVNPGDGAFYGPKIDIM---ITDALKRQHQCATVQLD----FQLPIRFNLKYR 602 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A+ V + G++ AV+ + GK W I I Sbjct: 603 T--DDAENFKRPVIIHRAIYGSLERFVAVLVEHYAGKFPFW------LSPRQILIVTVGA 654 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D ++ L + G DV DD G+ + + + + ++VG+ V I+ Sbjct: 655 AFVDYGYEVKDALFRAGFDVEIDDSGKTLNKKIREGQMAHYNFILVVGAHEKETRSVNIR 714 Query: 420 HRLTGIREDMSLEEVINYASHR 441 R +R +LEE I+ Sbjct: 715 TRDNKVRGTKTLEEAISMFKDL 736 >gi|325847870|ref|ZP_08170092.1| proline--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480888|gb|EGC83941.1| proline--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 572 Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats. Identities = 106/239 (44%), Positives = 161/239 (67%), Gaps = 1/239 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S Y++P L+++P+DAE SHKL++R I + S G+YS+LPLG + ++ + I+R+ Sbjct: 1 MRLSNYYMPTLRDDPQDAETQSHKLLVRGAFIRKTSSGVYSYLPLGMRVINKIENIVRKS 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + +IE+S LQS D+W +SGR+ ++G EM ++ DR+D+ GPT EE T + + Sbjct: 61 MEKYDSIEVSTSVLQSKDIWEKSGRWQNFGPEMFKIKDRHDREYCLGPTAEEQFTSLIKD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQI KFRDE RPRFG+ RSR+F+MKDAYSFD+ EG + SY KM+ + Sbjct: 121 ELNSYKQLPLNLYQIVSKFRDEKRPRFGINRSRDFIMKDAYSFDVDMEGLEKSYQKMWDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y+ +F LGL + +SG +GG+ SHEF+ LA+TGE ++F +++ D+ E+ F Sbjct: 181 YVEVFDALGLDYKIVEGDSGAMGGNTSHEFMALAETGEGEIFYTEN-SDYAATDESAKF 238 Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 67/174 (38%), Positives = 91/174 (52%), Gaps = 1/174 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 + + ARGIEVG+IF GTKYS + A F +GK MGSYGIG R ++A+IE Sbjct: 397 GKEELKIARGIEVGNIFQLGTKYSESLEAYFLDENGKQKPFIMGSYGIGITRSISAIIEQ 456 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 ++D GIIWP VAPF+ + + + + + EKIY L G +V DD E+ G + Sbjct: 457 NYDDNGIIWPTKVAPFEAWITLVNKNKEDQKQLAEKIYESLLDQGIEVMLDDRKERAGVK 516 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 F DL+G P ++ VG K SD VE R MS +E I + Sbjct: 517 FNDRDLVGCPYRITVG-KDASDDIVEFSKRSDMENLKMSSDEAIEKIVTSIKED 569 >gi|157414824|ref|YP_001482080.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116] gi|172047085|sp|A8FKW6|SYP_CAMJ8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157385788|gb|ABV52103.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116] Length = 568 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 113/271 (41%), Positives = 159/271 (58%), Gaps = 4/271 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G I Q G+Y++LPLG++ LD + I++EE Sbjct: 1 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFIEQIGSGLYNFLPLGKRVLDKIKNIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 61 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 121 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGCEFELMYKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ E Sbjct: 181 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICENC-DYAANVEAA--- 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 E+ A YA+ N K DSL Sbjct: 237 KRAKKTCQDERPEANYASKFHTPNIKTIDSL 267 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 65/223 (29%), Positives = 110/223 (49%), Gaps = 6/223 (2%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS---DVHNEKLFDSLPEN--KRVSA 279 ++DF + +E + + D+ K D + K + Sbjct: 346 DFYIDFELENEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLIEVKEGDCCAKCGAKLKQS 405 Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE+SHD KG I Sbjct: 406 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEASHDEKGCI 465 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W ++APF + +I D+ + K+Y L+ +G +V DD E+ G + +L+G Sbjct: 466 WNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMNDFELMG 525 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 FP +++G K + ++++E+ R ++E + +E++ + Sbjct: 526 FPYALVIG-KGLENNEIELIQREGLVKELIKTDELMEILKKKV 567 >gi|238852615|ref|ZP_04643025.1| proline--tRNA ligase [Lactobacillus gasseri 202-4] gi|238834761|gb|EEQ26988.1| proline--tRNA ligase [Lactobacillus gasseri 202-4] Length = 565 Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats. Identities = 109/265 (41%), Positives = 147/265 (55%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SH+LMLR G I Q + G+Y++LPLG + L II EE Sbjct: 1 MRQSKFFMPTLKEAPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLGYRVLRKAENIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MNNINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLQDRHGRESLLGPTHEETFTEIVAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDEQFDDQKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+IF R G+ P+ A+SG +GG S EF A GE + ++ D Sbjct: 181 YLKIFKRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNEKGTYAANLEMAKSID 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 ++ T D ++ Sbjct: 241 TFKQDPEDAKELTKVATPGMDTIDK 265 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 65/192 (33%), Positives = 93/192 (48%), Gaps = 2/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A NE D + IEVGHIF GT Y+ M A F +GK Sbjct: 375 DFKVDEFADIRTANEGELDPVDHLPLKFTTSIEVGHIFKLGTYYTKTMGADFLDNNGKAK 434 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V MGSYGIG R+++A IE GI WP +APF + LI +K D+ + EK+ Sbjct: 435 PVIMGSYGIGVTRMLSAAIEQHLTENGIAWPKEIAPFDVHLIQMKMKDEDQTELAEKLEK 494 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 LS DV +DD E+ G +F ADL+G PL++ +G K D VE+K +++ Sbjct: 495 ELSTK-YDVLYDDRNERPGVKFNDADLVGAPLRITIGRK-AKDGIVEVKRPTDEKAKEVD 552 Query: 431 LEEVINYASHRF 442 + ++ + Sbjct: 553 ISDLDAMITKEL 564 >gi|300361905|ref|ZP_07058082.1| proline--tRNA ligase [Lactobacillus gasseri JV-V03] gi|300354524|gb|EFJ70395.1| proline--tRNA ligase [Lactobacillus gasseri JV-V03] Length = 565 Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats. Identities = 109/265 (41%), Positives = 148/265 (55%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SH+LMLR G I Q + G+Y++LPLG + L II EE Sbjct: 1 MRQSKFFMPTLKEAPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLGYRVLRKAENIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MNNINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLQDRHGRESLLGPTHEETFTEIVAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDQQFDDQKGA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+IF+R G+ P+ A+SG +GG S EF A GE + ++ D Sbjct: 181 YLKIFNRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNEKGTYAANLEMAKSID 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 ++ T D ++ Sbjct: 241 TFKQEPEDAKELTKVATPGMDTIDK 265 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 66/192 (34%), Positives = 93/192 (48%), Gaps = 2/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A NE D + IEVGHIF GT Y+ M A F +GK Sbjct: 375 DFKVDEFADIRTANEGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTKTMGADFLDNNGKAK 434 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V MGSYGIG R+++A +E GI WP +APF I LI +K D+ + EK+ Sbjct: 435 PVIMGSYGIGVTRMLSAAVEQHLTKNGIAWPKEIAPFAIHLIQMKMKDETQTELAEKLEK 494 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 LS DV +DD E+ G +F ADL+G PL++ +G K D VE+K ++S Sbjct: 495 ELSTK-YDVLYDDRNERPGVKFNDADLVGAPLRITIGRK-AKDGIVEVKRPTDEKATEIS 552 Query: 431 LEEVINYASHRF 442 + ++ + Sbjct: 553 ISDLDAMITKEL 564 >gi|323356826|ref|YP_004223222.1| prolyl-tRNA synthetase [Microbacterium testaceum StLB037] gi|323273197|dbj|BAJ73342.1| prolyl-tRNA synthetase [Microbacterium testaceum StLB037] Length = 600 Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats. Identities = 99/249 (39%), Positives = 144/249 (57%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S +FL L+E+P DAE+ASH+L++R G I +++ GI++WLPLG K + ++REE Sbjct: 6 RLSNFFLRTLREDPSDAEVASHRLLVRAGYIRRNAPGIFAWLPLGLKVKAKIETVVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA E+ P L + + +GR++ YG + RL DR + PTHEE+ T + + Sbjct: 66 ANAGAFEVHFPALLPREPYEVTGRWEEYGDALFRLQDRKGADYLLAPTHEEMFTLLVKDL 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T YQIQ K+RDE RPR G++R REF MKDAYSFD T G SY +Y Sbjct: 126 YSSYKDLPLTIYQIQDKYRDEARPRAGLLRGREFTMKDAYSFDATDAGLNASYQAQRDAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF RLGL+ + + A++G +GG S EF+ GE S + + T + Sbjct: 186 ERIFTRLGLEYVIVAADAGAMGGSKSEEFLHPTPIGEDTFVRSAGGYAANVEAFTTVVPE 245 Query: 242 IISLNSIVE 250 + + + Sbjct: 246 ALPIEGQPD 254 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 5/185 (2%) Query: 258 ATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +V + D P+ ARG+E+GH+F G KY+ + +GK V MG Sbjct: 417 GFVEVSTVRAGDPAPDGSGPVELARGMEIGHVFQLGRKYAEALGLKVLDENGKLATVTMG 476 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R++A + E ++D KG+IWP SVAPF + ++ D + E++ A L Sbjct: 477 SYGIGVTRILAIIAELNNDEKGLIWPASVAPFDVHVVATG-RDAAAFELAEQVSADLEAA 535 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV +DD G +F A+L+G P +IVG + ++ +VE+ R TG RE + + + Sbjct: 536 GLDVLYDDRPKVSPGVKFGDAELVGIPRILIVG-RGAAEGQVELWDRRTGERETLPVADA 594 Query: 435 INYAS 439 + + Sbjct: 595 LAALA 599 >gi|317008795|gb|ADU79375.1| threonyl-tRNA synthetase [Helicobacter pylori India7] Length = 612 Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 150/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ WLP G + + ++ + G Sbjct: 207 YLFQIEEAKKRDHRKLGVELGLFS-FDDEIGAGLPLWLPKGARLRKRIEDLLSKALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + + + +I Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQSE-VSTILDFTHKI 383 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G + P + + + Sbjct: 384 MQAFGFSYEM-ELSTRPAKS-----------------IGDDKVWEKATNALKEALKEHRI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 DYKIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + Sbjct: 475 EYNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHHV 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + A+ P+ +++G++ V + I+ R Sbjct: 529 FAFKLKEALKKHDIFVEVLDKNDSLNKKVRSAEKQKIPMILVLGNEEVESEILSIRDREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 589 QAQYKMPLKEFLNMVESKMQE 609 >gi|261368006|ref|ZP_05980889.1| threonine--tRNA ligase [Subdoligranulum variabile DSM 15176] gi|282569994|gb|EFB75529.1| threonine--tRNA ligase [Subdoligranulum variabile DSM 15176] Length = 596 Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats. Identities = 72/439 (16%), Positives = 150/439 (34%), Gaps = 40/439 (9%) Query: 12 QENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD ++ R M +G+ +LP G + I++++ G + + Sbjct: 189 EARERDHRKIGKEM--RLFMTDDLVGRGLPMFLPNGYIVWQQLEDYIKQKERERGYLHVM 246 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + + +L+ SG +D Y + M + ++ + P + I+ + SYR LP Sbjct: 247 TPCIGTVNLYRTSGHWDHYRENMFPAMEMEGESYVLRPMNCPHHMMIYANQPHSYRQLPI 306 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 +I FR E G+ R R F DA+ +TPE K + ++ Sbjct: 307 RIGEIAHDFRYESSGTLKGIERGRHFCQNDAH-LFVTPEQIKDEVAAVCALIFDVYKDFH 365 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDIISLNSI 248 + D + + + D + + ++ + Sbjct: 366 ITDYRCVLSLR--------------DPADKKKYHDDDAMWNHAEQALREVLTELGIQFTE 411 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A Y DV + ++ +S ++ F K+ T+ DG Sbjct: 412 EIGEAAFYGPKLDV---NVKPAVGAEYTLSTCQLD----FCLPAKF----HLTYVDKDGS 460 Query: 309 DHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + + +G++ A + G+ W V + + + D + Sbjct: 461 EKTPVVLHRAILGSLDRFMAYLIEETKGRFPTWLAPVQVKVLPV------SEKTLDYARE 514 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVA-DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + +L G D+ E+IG + +A P +++G+K V + +++R G Sbjct: 515 VNDKLKAAGIRAVLDESNEKIGYKIRLAQQEDRAPYMLVLGAKEVEAGNISVRNRK-GET 573 Query: 427 EDMSLEEVINYASHRFSNN 445 M L+ + +N Sbjct: 574 TAMDLDAFVAQVKDEIANK 592 >gi|50954884|ref|YP_062172.1| prolyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07] gi|81826655|sp|Q6AEX8|SYP_LEIXX RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|50951366|gb|AAT89067.1| prolyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 590 Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats. Identities = 102/284 (35%), Positives = 144/284 (50%), Gaps = 2/284 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R + YFL L+E+P DAE+ SH+L++R G I + + G+++WLPLG + + IIREE Sbjct: 4 RLTNYFLRTLREDPADAEVTSHRLLVRAGYIRRQAPGVFAWLPLGLRVKAKIERIIREEL 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 GA E+ P L + + +GR++ YG + L DR + PTHEE T + + Sbjct: 64 AAAGAHEVHFPALLPREPYEITGRWEEYGDALFHLKDRKGADYLLAPTHEEAFTLLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T +QIQ K+RDE RPR G++R REF MKDAYSFD T G SY +Y Sbjct: 124 YSSYKDLPLTIFQIQDKYRDEARPRAGLLRGREFTMKDAYSFDATDAGLDVSYQAQRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF RLGL + ++A++G +GG S EF+ GE S + + T Sbjct: 184 ERIFARLGLDFVIVQADAGAMGGSRSEEFLHPTPIGEDTFVRSAGGYAANVEAFTTVAPP 243 Query: 242 IISLN--SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 E P A T E + P + Sbjct: 244 ARPFEGLPSPEVHDTPNAPTIQALVEVANEQSPRPDGRVWTAAD 287 Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 64/185 (34%), Positives = 100/185 (54%), Gaps = 5/185 (2%) Query: 258 ATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T +V K D P+ ARG+E+GH+F G KY+ + T +GK V MG Sbjct: 405 GTVEVAEVKAGDPAPDGSGPVELARGMEIGHVFQLGRKYADALGLTVLDENGKLVTVTMG 464 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R++A + E ++D KG++WP++VAPF + ++ +QV D E+ A+L V Sbjct: 465 SYGIGVTRILAIIAEENNDDKGLVWPEAVAPFDVHVVAAG-REQVAFDVAEQAVAQLEAV 523 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV +DD G +F A+L+G P ++VG + + +VE+ R G + L E Sbjct: 524 GLDVLYDDRPKVSPGVKFGDAELIGVPRVLVVG-RGAAQGEVELWDRRGGNHTTLPLSEA 582 Query: 435 INYAS 439 + + Sbjct: 583 VAALT 587 >gi|295836236|ref|ZP_06823169.1| proline-tRNA ligase [Streptomyces sp. SPB74] gi|295825921|gb|EFG64555.1| proline-tRNA ligase [Streptomyces sp. SPB74] Length = 563 Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats. Identities = 111/269 (41%), Positives = 154/269 (57%), Gaps = 4/269 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE SHKL++R G + + + G++SWLPLG+K LDN++ I+REE Sbjct: 6 RMSRLMVKTLRDDPADAETLSHKLLVRAGYVRRTAAGVWSWLPLGKKVLDNISQIVREEL 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + +GR++ YG + RL DR + GPTHEE+ T + + Sbjct: 66 DAIGAQEVLLPALLPREPYEATGRWEEYGDLLFRLKDRKGADYLLGPTHEEIFTQVVKDQ 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR GV+R REFLMKD+YSFD T EG SY +Y Sbjct: 126 CTSYKDLPVMLYQIQTKYRDEARPRSGVLRGREFLMKDSYSFDTTDEGLAESYALHREAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +IF RLGL + A SG +GG S EF+ A GE F F +E F Sbjct: 186 RKIFARLGLDYRIVSAVSGAMGGSASEEFLAPAAAGE-DTFADCPNCGFAANTEAVTFKG 244 Query: 242 I---ISLNSIVEQWTAPYAATSDVHNEKL 267 S + VE+ P T + E L Sbjct: 245 AAVDGSAHGPVEELDTPDTPTIETLAEHL 273 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 62/177 (35%), Positives = 90/177 (50%), Gaps = 6/177 (3%) Query: 266 KLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 + D P + R IE+GHIF G KY+ G +GK V MGSYGIG R Sbjct: 389 QEGDPCPNCGQGLHLDRAIEIGHIFQLGRKYADTFQLDVLGQNGKPVRVTMGSYGIGVSR 448 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 VAA+ E + D KG+ WP VAP + + A + + ++ +L+ G V DD Sbjct: 449 AVAALAEQTADDKGLCWPAEVAPADVH--VVAAGKVLQTELALEVADKLAAAGARVLVDD 506 Query: 384 M-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 G G +F A+L+G P VI G + ++ VE+K R TG RE++ +EE + + Sbjct: 507 RAGVSPGVKFTDAELIGVPKTVIAGRR-AAEGIVELKDRRTGEREELPVEEAVARLT 562 >gi|332797162|ref|YP_004458662.1| threonyl-tRNA synthetase [Acidianus hospitalis W1] gi|332694897|gb|AEE94364.1| threonyl-tRNA synthetase [Acidianus hospitalis W1] Length = 542 Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats. Identities = 78/438 (17%), Positives = 160/438 (36%), Gaps = 37/438 (8%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + + D I K+ L + + G+ + P GQ + + ++E G E+ Sbjct: 128 LEKASETDHRILGEKMDLFS-FPEEAGPGLVLYHPKGQIIRNELIDYMKEINASMGYQEV 186 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 + LW SG Y+ Y +ML +D+ + P + I++S +SY++LP Sbjct: 187 YTTHVYRTILWKISGHYEMYKDKMLIFTH-DDEELGIKPMNCPAHILIYKSRTRSYKDLP 245 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 F + +R E + +G++R R F D + L + ++ + L + + Sbjct: 246 IRFSEFGNVYRWEQKGELYGLLRVRGFTQDDGH-VFLREDQLENEVKMLISKTLEVLAKF 304 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 G K +R T + + + + + + + Sbjct: 305 GFKGDDVRINL---------------STRPDESIGTDEQWEKATNALVNALRSLNLKYQV 349 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 E+ A Y D + DSL ++S ++ F ++ + DG Sbjct: 350 KEKEGAFYGPKIDFD---IRDSLGRWWQLSTIQVD----FNLPERF----KLEYVDKDGS 398 Query: 309 DHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + G++ A++ GK W ++P ++ ++ I R+ EK Sbjct: 399 KKRPVMVHRAIYGSIDRFLAILLEHFKGKLPTW---LSPIQVRILPINP---EVREYAEK 452 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + ++L V D E + + A G P +I+G K + V I+ R + Sbjct: 453 VLSKLVSVKIRAEIDSEEETLSKRIKKAYDDGVPYILIIGKKEAESNSVTIRARGNIEVK 512 Query: 428 DMSLEEVINYASHRFSNN 445 + L++ ++ S N Sbjct: 513 GVPLDKCVDAISKEIQNR 530 >gi|225874389|ref|YP_002755848.1| proline--tRNA ligase [Acidobacterium capsulatum ATCC 51196] gi|254782879|sp|C1F3P3|SYP_ACIC5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|225793232|gb|ACO33322.1| proline--tRNA ligase [Acidobacterium capsulatum ATCC 51196] Length = 585 Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats. Identities = 109/236 (46%), Positives = 146/236 (61%), Gaps = 2/236 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ F+P L+E P DAE+ASHK +LR+G I Q GIYS+L GQ++++ + I+REE Sbjct: 3 RWSRLFVPTLREAPSDAEVASHKFLLRSGYIRQLGAGIYSYLLFGQRSINKIVGIVREEM 62 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 ++ G E +P + ADLW ESGR+ G M RL DR + G THEEVMTDI R+ Sbjct: 63 DKIG-QEFLLPAIHPADLWRESGRWTVMGDNMFRLKDRKGAELCLGMTHEEVMTDIARNE 121 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 ++SY+ LP +YQIQ KFRDE RPR G++R R+FLMKD+YSFDL G SY+ +Y Sbjct: 122 LRSYKQLPQIWYQIQNKFRDEPRPRSGLLRVRQFLMKDSYSFDLNQAGLDKSYDLHDAAY 181 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 IF R GL + + A+SG +GG S EF+V D GE + + E Sbjct: 182 RAIFTRCGLNFVVVEADSGAMGGSGSQEFMVYTDAGEDLIASCAKC-GYAANMEKA 236 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 1/191 (0%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 +T AA E + A+ +E+GHIF GTKY+ M A +GK+ Sbjct: 394 DFTWTVAADIRNAAEGEGCPVCGEPLKVAKAVEIGHIFKLGTKYTESMGARVLDENGKEV 453 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 MG YGIG R++ A IE ++D G P S+APF + + D+ R A E + A Sbjct: 454 MPVMGCYGIGIERILTASIEQNNDANGFWLPRSIAPFDVVVTITNMADETLRQAGEALAA 513 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +L G DV DD E+ G +F ADL+G P + VG K + E+ R T +D++ Sbjct: 514 QLEAAGYDVLLDDREERAGVKFKDADLVGIPYRFNVGKKTLEGKT-ELVTRATASSQDVA 572 Query: 431 LEEVINYASHR 441 L+ + Sbjct: 573 LDAAVEALKAL 583 >gi|119025818|ref|YP_909663.1| threonyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703] gi|118765402|dbj|BAF39581.1| threonyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703] Length = 711 Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats. Identities = 63/461 (13%), Positives = 133/461 (28%), Gaps = 54/461 (11%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L+E RD ++ L + + G+ + P G ++ + RE + Sbjct: 276 KAYQTRLEEAAKRDHRKLGAEMDLFS-FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRK 334 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHE 111 + P + L+ SG Y M + P + Sbjct: 335 HHYSFVQTPHITKGGLYETSGHLQWYKDSMYPPMRLDEEKDENGNVIKQGFDYYLKPMNC 394 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 395 PMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMK 454 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L + GL + + + S + + Sbjct: 455 DEL-KSLLTFVLGLLKDFGLDDFYLELST----------------KDPHKYVGSDEIWEE 497 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + A Y + + D++ +VS ++ F Sbjct: 498 ATNTLAEVAKESGLDLVDDPCGAAFYGPKI---SVQARDAIGRTWQVSTIQLD----FNL 550 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 ++ + ADG + R + IE + + + Sbjct: 551 PERF----KLEYIAADGT------HQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAP 600 Query: 351 LINIKAHDQVCRDAC---EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + + V + +K A L + D ++ G + A P +IVG Sbjct: 601 VQVLGV--PVADEFAPHLQKFIASLEEETVRCEIDLSDDRFGKKIRNASKSKAPFILIVG 658 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 + ++++ V + R + ++E V Sbjct: 659 EEDMNNNAVSFRFRDGSQLNGVPVDEAKANILTVIKKRVQV 699 >gi|331703296|ref|YP_004399983.1| Threonine tRNA ligase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801851|emb|CBW54004.1| Threonine tRNA ligase [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 639 Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats. Identities = 76/436 (17%), Positives = 158/436 (36%), Gaps = 37/436 (8%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD + + L + G G+ WLP G + + +R+++ I + P + Sbjct: 236 RDHRLINKTLNIF-GFDQLVGAGLPLWLPNGFIVKNEIEKYLRQKEWEYDYIPVETPPIG 294 Query: 76 SADLWVESGRYDSYGKEMLRLADR---NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + +L+ SG +D YG++M + + +D+ I P + +++ +SYR+LP Sbjct: 295 TVELYKTSGHWDHYGEDMFQPFNGGKGSDEQFILRPMNCPHHIAVYKQEQRSYRDLPLRI 354 Query: 133 YQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 + ++ R E G+ R R + D++ F + + R K Sbjct: 355 CEHAIQHRFESSGSLTGLERVRGMKLTDSHIFVRSDQIEDEF-------------RSTYK 401 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDIISLNSIVE 250 I ++ I D + L D + F D D S D+ Sbjct: 402 LISEVLKTFNIQIDYLS--LSLRDPNDKVKFYKDDLMWDKAESSLEKVLIDLGLKYEKRI 459 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D+ ++ + VS ++ F T+ D K Sbjct: 460 GDAAFYGPKLDI---QIKTAQNHEITVSTIQLDFLMPNKFD--------LTYIDKDQKLV 508 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 M G + I + + + P +AP ++ +I I + + I+ Sbjct: 509 RPIMIHR--GLIGTYERFIATLLEQTKGVLPLWLAPKQVEIIPI---SESNLEYANLIHQ 563 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +L K D E++ + A P Q+++G+K V ++ + + + + + Sbjct: 564 KLKKEFIRSHIDLRDERLSYKIRDAQTKKVPYQLVLGNKEVENNTITYRQYGSDAQITVP 623 Query: 431 LEEVINYASHRFSNNR 446 ++E I+ + ++ + Sbjct: 624 IQEFIDMLKQQINDKK 639 >gi|269219392|ref|ZP_06163246.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332] gi|269211185|gb|EEZ77525.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332] Length = 709 Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats. Identities = 68/444 (15%), Positives = 130/444 (29%), Gaps = 45/444 (10%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 I + RD +L L + + G+ + P G V + + G Sbjct: 247 RIAEAERRDHRRLGAELDLFS-FPEEIGPGLVVFHPKGGILRHIVESYVTRRHLEEGFDF 305 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTD 116 + P + L+ SG Y M R + + + Sbjct: 306 VHTPEISKGGLFHTSGHLPYYADTMFPPMKVDEERGADGEVTRAGQDYYLKAMNCPMHNL 365 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IFRS +SYR LP F+++ +R E G+ R R F D++++ + Sbjct: 366 IFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFTQDDSHTYCTPEQAKGE-IE 424 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 + +L I GL + + G + S + Sbjct: 425 MLLNFFLDILRDFGLTDFYLELSTRDEGKKKD------------KFIGSDEDWAAATRIL 472 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 A Y + ++ D+L ++S + Sbjct: 473 EEACAATGLDLVPDPGGAAFYGPKV---SVQVKDALGRTWQMSTVQYDFNQP-------- 521 Query: 296 LPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + DG + S +G++ V+ + G W + Sbjct: 522 ERFDLEYTAPDGSRRRPVMIHSAKLGSVERFIGVLTEHYAGAFPAW------LAPVQARL 575 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 + CE++ A+L G V D ++ G + A P +I G + Sbjct: 576 VPVAEAFNPYCEEVAAKLRAAGIRVDVDLSDDRFGKKIRNAAKEKIPFTLIAGGEDAEAE 635 Query: 415 KVEIKHRLTGIREDMSLEEVINYA 438 V ++R +S++E + + Sbjct: 636 AVSFRYRDGHQENGVSVDEAVAHI 659 >gi|71895375|ref|NP_001026618.1| threonyl-tRNA synthetase, cytoplasmic [Gallus gallus] gi|53128235|emb|CAG31282.1| hypothetical protein RCJMB04_4k14 [Gallus gallus] Length = 711 Score = 213 bits (541), Expect = 6e-53, Method: Composition-based stats. Identities = 79/449 (17%), Positives = 158/449 (35%), Gaps = 44/449 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 294 KMLKEWEKFQEEAKNRDHRKIGRDQELF--FFHELSPGSCFFLPKGAYIYNTLIEFIRSE 351 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + P + +F Sbjct: 352 YRKRGFQEVVTPNIFNSKLWMTSGHWQHYSENMFSFEVEKEI-FALKPMNCPGHCLMFDH 410 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + + K + Sbjct: 411 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCSVEQIEEE--IKSCL 468 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 +LR + + S + + P E A+ Sbjct: 469 QFLRAVYDVFGFSFKLNLSTRPEKYLGDIEVWNRAEK-----------------QLENSL 511 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 +D + A Y D+ ++ D++ + + ++ F S+ + Sbjct: 512 NDFGEKWELNPGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQL----SIRFN 560 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 TF DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 561 LTFVSHDGNDKTRPVIIHRAILGSVERMIAILT---ENYGGKWPLWLSPQQVMVVPVGP- 616 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ + G D D G + + A L + ++VG K + V Sbjct: 617 --TCDEYAQKVRQQFHDAGLMADIDVDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTV 674 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 I+ R + + ++ + + + Sbjct: 675 NIRTRDNKVHGERTIADTVKRLLELKCSR 703 >gi|227529103|ref|ZP_03959152.1| prolyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540] gi|227350947|gb|EEJ41238.1| prolyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540] Length = 580 Score = 213 bits (541), Expect = 6e-53, Method: Composition-based stats. Identities = 104/237 (43%), Positives = 145/237 (61%), Gaps = 2/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P +E P DAE SHK+M+R G I+Q S G++++LP+ + + V IIR+E Sbjct: 1 MQQSKILIPTKKEAPSDAEALSHKMMVRAGYIYQVSAGVWAYLPMAYRVIRKVENIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM +P L ADLW ESGRY+SYG + +L DR D+ I GPTHEE T++ R Sbjct: 61 MEKAGAVEMMMPALLPADLWKESGRYESYGDNLFKLKDRRDRDFIMGPTHEETFTEVIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQ+Q KFRDE RPR+G++R +EF M D YSF G +Y+ + Sbjct: 121 SIKSYKKLPLVVYQLQDKFRDEDRPRYGILRGKEFEMLDGYSFSADQAGLDQAYDLQARA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF R+GL + A+SG +GG S EF A+ GE + + D+ E Sbjct: 181 YRNIFDRIGLDYKVILADSGTMGGKNSQEFSAPAEVGEDIIAYTDG--DYAANLEKA 235 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 74/228 (32%), Positives = 111/228 (48%), Gaps = 2/228 (0%) Query: 217 GETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK- 275 GE + +++ + DD + D N K + P+ Sbjct: 343 GEDVKIYADNYVKVMVNMACGANDDGHHYINANIDRDFCVDQFGDFRNVKEGEIAPDGHP 402 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 GIE+GHIF GT YS + A +G+ V MGSYGIG R+++AV E + D Sbjct: 403 IKFTPGIEIGHIFKLGTHYSKKLGAQVLDNNGRLVDVIMGSYGIGVSRLLSAVAEQTADD 462 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 G++WPDS+APF + +I + A + ++ L K G DV DD E+ G +FA + Sbjct: 463 NGLVWPDSIAPFDVHVIPVNAKKADQMEMANELTVALEKAGYDVLVDDRKERAGVKFADS 522 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 DL+G P+++ VG K SD VE+K R TG ++ EEV+N + Sbjct: 523 DLIGIPIRITVGKK-ASDGIVEVKIRKTGETVEVKTEEVVNTVAILLK 569 >gi|328778641|ref|XP_395662.3| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like isoform 1 [Apis mellifera] Length = 718 Score = 213 bits (541), Expect = 6e-53, Method: Composition-based stats. Identities = 70/439 (15%), Positives = 146/439 (33%), Gaps = 43/439 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + IR E + G E+ Sbjct: 312 EEAAKRDHRKIGKEQELF--FFHELSPGSCFFQPRGAYIYNTLVEFIRSEYRKRGFQEVV 369 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + + LW SG + Y + M D + P + IF +S+R LP Sbjct: 370 TPNIYNNKLWQTSGHWLHYAENMFSF-DVEKETFALKPMNCPGHCMIFDVRNRSWRELPL 428 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+E+ G+ R R F DA+ F + ++ G Sbjct: 429 RMADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCSVDQIKDEMI-GALEFLKHVYSVFG 487 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + P E A+ + D I Sbjct: 488 FTFNLC-LSTRPEKYLGDLEMWNQAEK-----------------ALAESLDAFGEQWKIN 529 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 + A Y D+ + D+L + + ++ F ++ + ++ G+ Sbjct: 530 PEDGAFYGPKIDI---TIMDALKRAHQCATIQLD----FQLPIRF----NLSYVNEAGEK 578 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + +G++ + A++ + WP ++P ++ +I + D ++ Sbjct: 579 TRPVIIHRAILGSVERMIAILT---ESYAGKWPFWLSPRQVMVIPV---SSQFDDYAIQV 632 Query: 369 YARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +L G D D + + + A L F ++VG K ++ V ++ R + Sbjct: 633 KDKLWNDGFMAELDTDPSDTLNKKIRNAQLAQFNFILVVGEKELNAGTVNVRTRDNVVHG 692 Query: 428 DMSLEEVINYASHRFSNNR 446 ++ +++++ F + Sbjct: 693 EILVDDLLKKFR-IFKERK 710 >gi|305433094|ref|ZP_07402250.1| proline--tRNA ligase [Campylobacter coli JV20] gi|304443795|gb|EFM36452.1| proline--tRNA ligase [Campylobacter coli JV20] Length = 569 Score = 213 bits (541), Expect = 6e-53, Method: Composition-based stats. Identities = 112/271 (41%), Positives = 159/271 (58%), Gaps = 4/271 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 2 MKFSKLYAPSLKEAPKDATLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 62 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 122 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ E Sbjct: 182 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICENC-DYAANVEAAV-- 238 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + E+ A YA+ N K DSL Sbjct: 239 -RANKTCDEERPEANYASKFHTPNIKTIDSL 268 Score = 156 bits (394), Expect = 7e-36, Method: Composition-based stats. Identities = 67/224 (29%), Positives = 105/224 (46%), Gaps = 6/224 (2%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS---DVHNEKLFDSLPEN--KRVSA 279 ++D + E + + D+ K D + K + Sbjct: 347 DFYLDKELEGEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLAEVKENDCCAKCGAKLKLS 406 Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE++HD KG I Sbjct: 407 KGIEVGHIFKLGQKYSKAMNANFLDENGKSKPFYMGCYGIGVSRLLAVAIEANHDEKGCI 466 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W ++APF + +I D+ + K+Y LS G +V DD E+ G + +L+G Sbjct: 467 WNKTLAPFTLEIIISNIKDEKSLEFATKLYEDLSNAGIEVLLDDRNERFGVKMNDFELMG 526 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 FP ++VG K + ++E R T ++ +S +EV ++ Sbjct: 527 FPYALVVG-KGLEKDELEFIDRKTLEKKIISSKEVFDFIKKSVE 569 >gi|311739567|ref|ZP_07713402.1| threonine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035] gi|311305383|gb|EFQ81451.1| threonine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035] Length = 687 Score = 213 bits (541), Expect = 6e-53, Method: Composition-based stats. Identities = 60/448 (13%), Positives = 134/448 (29%), Gaps = 47/448 (10%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD +L L + + G + P G + R + G ++ Sbjct: 260 EEAEKRDHRRLGQELDLFS-FPDEIGSGFPVFHPNGATVRMEMENHSRNRHVQAGYSFVN 318 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRND------------KAMIYGPTHEEVMTDIF 118 P + DL+ +SG D Y M + + P + + IF Sbjct: 319 TPHITKGDLFKKSGHLDFYADGMFPPMQLDGEYDEEGNTVKEPQDYYAKPMNCPMHNLIF 378 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 S +SYR LP ++ +R E G+ R+R F DA+ + + + + Sbjct: 379 ASRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTEEQLEEELTK-V 437 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 + + GL + + + S + + + Sbjct: 438 LDFIISLLKDYGLSDFYLELST----------------KDPNKFVGSDEIWERSTSILQS 481 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + A Y + + D++ ++S ++ F ++ L Sbjct: 482 VAEKSGLELVPDPAGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FNLPERFELE 534 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 +A+ K + + G++ V+ + G W I + Sbjct: 535 YTAS---DGTKKRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVVGIPVA----- 586 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 E++ A+L + G D +++ + P ++ G++ V V Sbjct: 587 -DEFSPHLEEVAAQLRQKGIRADVDTSDDRMQKKIRNHTTGKVPFMLVAGARDVEADAVS 645 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 + + ++E + + + Sbjct: 646 FRFLDGTQVNGVPVKEAVELIAAWVAER 673 >gi|219113513|ref|XP_002186340.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|209583190|gb|ACI65810.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 766 Score = 213 bits (541), Expect = 7e-53, Method: Composition-based stats. Identities = 80/439 (18%), Positives = 158/439 (35%), Gaps = 37/439 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + K L M H S G WLP G + + + I+ G E+ Sbjct: 362 EKAKERDHRRIAAKQDL--IMFHDLSAGSAFWLPHGARIYNKLIDFIKSHYWNRGYDEII 419 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + + DLW +SG Y M D + P + +F + I+SYR+LP Sbjct: 420 TPNIYNLDLWHKSGHALHYKDAMF-CFDVEGQEWAMKPMNCPGHCLMFANSIRSYRDLPL 478 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F + R+EL G+ R R F DA+ + + K + + ++++ + Sbjct: 479 RFADFGVLHRNELSGALTGLTRVRRFQQDDAHIYCREDQIEKEVVDAL--NFMKDVYDTF 536 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL--NS 247 + + + P + + + D Sbjct: 537 GMTYKLELSTRP-----------------QKALGDVALWERAEEALANAMDMFAGKGGWR 579 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 + A Y D+ K+ D++ + + ++ F +Y+ +A+ + Sbjct: 580 VNPGDGAFYGPKIDI---KVMDAMDRVHQCATVQLDFQLPIRFDLQYT---TASKEEGQQ 633 Query: 308 KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 V + +G++ + AV+ + G WP ++P ++ L+ + D E Sbjct: 634 FARPVMIHRAMLGSVERMFAVL---CEHYGGKWPFWLSPRQVMLVPV---HAEFFDYSED 687 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 I A+L G V D + A + + Q +VG V++ V I++R + Sbjct: 688 IRAKLHAEGFYVDVDTSKNTFQKKVRNAQVAQYNFQFVVGKAEVANGSVNIRNRENQVEG 747 Query: 428 DMSLEEVINYASHRFSNNR 446 + ++E+I ++ Sbjct: 748 EKKIDEMIAMLKQLREEHK 766 >gi|13882685|gb|AAK47237.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551] Length = 578 Score = 213 bits (541), Expect = 7e-53, Method: Composition-based stats. Identities = 100/258 (38%), Positives = 148/258 (57%), Gaps = 1/258 (0%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+ FL L+++P DAE+ASHKL++R G I + G+YSWLPLG + L N+ +IR+E N Sbjct: 1 MSELFLRTLRDDPADAEVASHKLLIRAGYIRPVAPGLYSWLPLGLRVLRNIERVIRDEMN 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ P L + + R+ YG + RL DR + GPTHEE+ T + Sbjct: 61 AIGGQEILFPALLPRAPYETTNRWTQYGDSVFRLKDRRGNDYLLGPTHEELFTLTVKGEY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++ P T YQIQ K+RDE RPR G++R+REF+MKD+YSFD+ G K +Y+ +Y Sbjct: 121 SSYKDFPLTLYQIQTKYRDEARPRAGILRAREFVMKDSYSFDIDAAGLKAAYHAHREAYQ 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ-VFCSKDFMDFPIPSENTDFDD 241 RIF RL ++ + + A SG +GG S EF+ + +GE V C + + + T D Sbjct: 181 RIFDRLQVRYVIVSAVSGAMGGSASEEFLAESPSGEDAFVRCLESGYAANVEAVVTARPD 240 Query: 242 IISLNSIVEQWTAPYAAT 259 + ++ + E T Sbjct: 241 TLPIDGLPEAVVHDTGDT 258 Score = 127 bits (318), Expect = 5e-27, Method: Composition-based stats. Identities = 67/174 (38%), Positives = 93/174 (53%), Gaps = 4/174 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ V ARGIE+GHIF G+KY+ +A G DGK + MG Sbjct: 391 GTIEAAEVREGDPSPDGAGPLVMARGIEIGHIFQLGSKYTDAFTADVLGEDGKPVRLTMG 450 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VA V E HD G+ WP +VAPF + L I D R + A L ++ Sbjct: 451 SYGIGVSRLVAVVAEQHHDELGLRWPSTVAPFDVHL-VIANKDAQARAGATALAADLDRL 509 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 G +V DD G +F A+LLG P V+VG + +D VE++ R +G ++ Sbjct: 510 GVEVLLDDRQASPGVKFKDAELLGMPWIVVVG-RGWADGVVELRDRFSGQTREL 562 >gi|197122302|ref|YP_002134253.1| threonyl-tRNA synthetase [Anaeromyxobacter sp. K] gi|238689843|sp|B4UAM8|SYT_ANASK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|196172151|gb|ACG73124.1| threonyl-tRNA synthetase [Anaeromyxobacter sp. K] Length = 650 Score = 213 bits (541), Expect = 7e-53, Method: Composition-based stats. Identities = 79/446 (17%), Positives = 136/446 (30%), Gaps = 49/446 (10%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L T H+ + G WLP G + + +R + G Sbjct: 238 LAKLEEVKKRDHRRLGPQLGLFT--FHEFAPGAPFWLPAGTVLYNVLEDAMRRLVLKNGY 295 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLAD---------RNDKAMIYGPTHEEVMTDI 117 E+ P L + LW SG + Y + M + D + + P + I Sbjct: 296 QEVKTPLLFNKRLWETSGHWGKYRENMFLVVDSESDPALPLEDRCSFSLKPMNCPSHHLI 355 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 +R +SYR LP ++ R+E G+ R R+F DA+ + + + + Sbjct: 356 YRMDKRSYRELPVRYFTTDALHRNEASGSLGGLTRVRQFEQDDAHIYLREEQVTDE-VLR 414 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 +F ++ GL F T Q D Sbjct: 415 IFELMKVVYGAFGLG------------------FEATFSTRPEQRIGDDALWDRAEALLR 456 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 D ++ A Y D+ + DSL + ++ Sbjct: 457 KSLDATGLKWTLNAGDGAFYGPKIDML---VTDSLGRKWQTCTIQLDYAAP--------E 505 Query: 297 PMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 TF G D K+H + G+ A++ + G W + Sbjct: 506 RFDLTFVGEDNKEHRPVVIHRAIYGSFERFVAILVEHYAGAFPAW------LAPVQARVV 559 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + L G V D +++G++ A L P ++VG K V Sbjct: 560 TVSDRFEAWAREAGEALQARGWRVEVDASSDKLGAKIRNAQLAKIPFTLVVGEKEVEAKG 619 Query: 416 VEIKHRLTGIREDMSLEEVINYASHR 441 V + + M LE + Sbjct: 620 VSPRRHGGEDLKTMPLEAFAELMTRE 645 >gi|322434762|ref|YP_004216974.1| prolyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9] gi|321162489|gb|ADW68194.1| prolyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9] Length = 612 Score = 213 bits (541), Expect = 7e-53, Method: Composition-based stats. Identities = 121/312 (38%), Positives = 168/312 (53%), Gaps = 9/312 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R SK F+P L+E P DAE+ASHKL+LR G + Q GIYS+L LGQ++++ + AIIR+E Sbjct: 3 RWSKLFIPTLREAPSDAEVASHKLLLRAGYVRQLGAGIYSYLFLGQRSVNKIVAIIRQEM 62 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E +PT+ ++W ESGR+ G M RL DR + G THEEVMT I RS Sbjct: 63 DTIG-QEFLLPTIHPREVWEESGRWTGMGDNMFRLKDRKGAELCLGMTHEEVMTTIARSE 121 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 ++SY+ LP +YQIQ KFRDE RP+ G++R R+F+MKD+YSFD+ G SYN +Y Sbjct: 122 LRSYKQLPQIWYQIQTKFRDEPRPKSGLLRVRQFIMKDSYSFDIDEAGLDLSYNLHDAAY 181 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF R GL+ + + A+SG +GG S EF+V D GE + S + + Sbjct: 182 RRIFDRCGLEYVAVEADSGAMGGSQSQEFMVYTDAGEDLIASSTSGYAANLEKATSALTP 241 Query: 242 IISLNSIVEQ-----WTAPYAATSDVHNEKLFDSLPENKRVSA---RGIEVGHIFYFGTK 293 +I L + T A SDV + + K V+ R + G Sbjct: 242 VIDLEPTGDGLPELVLTPGLGAISDVTAFFGIHASQDIKCVAFMGTRTAQPGTTEPLRPV 301 Query: 294 YSLPMSATFKGA 305 + F Sbjct: 302 VAFLRGDHFVNE 313 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 60/183 (32%), Positives = 85/183 (46%), Gaps = 4/183 (2%) Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRV 324 E D + + +E+GHIF G KYS M AT DGK+ MGSYGIG R+ Sbjct: 431 EGELDPIGNLPLRLGKAVEIGHIFKLGYKYSKSMGATVLNRDGKEVTPIMGSYGIGVERI 490 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINI---KAHDQVCRDACEKIYARLSKVGCDVFW 381 + A IE+S G A + + + +A EKI A L+ G DV Sbjct: 491 LTAAIETSAAKNGGEAYALPASIAPFQVIVTVTNIKEPALVEAGEKIAADLAAAGLDVLL 550 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 DD E+ G +F ADL G P ++ VG K +S+ +VE+ RL D+ +E + + Sbjct: 551 DDRDERAGVKFKDADLTGVPYRIAVGKK-LSEGQVELLDRLQNQTLDIPVEAAVQTLRNL 609 Query: 442 FSN 444 Sbjct: 610 LGK 612 >gi|256384406|gb|ACU78976.1| threonine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12] gi|256385238|gb|ACU79807.1| threonine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12] gi|296455488|gb|ADH21723.1| threonine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 639 Score = 213 bits (541), Expect = 7e-53, Method: Composition-based stats. Identities = 75/436 (17%), Positives = 157/436 (36%), Gaps = 37/436 (8%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD + + L + G G+ WLP G + + +R+++ I + P + Sbjct: 236 RDHRLINKTLNIF-GFDQLVGAGLPLWLPNGFIVKNEIEKYLRQKEWEYDYIPVETPPIG 294 Query: 76 SADLWVESGRYDSYGKEMLRLADR---NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + +L+ SG +D YG++M + + +D+ I P + +++ +SYR+LP Sbjct: 295 TVELYKTSGHWDHYGEDMFQPFNGGKGSDEQFILRPMNCPHHIAVYKQEQRSYRDLPLRI 354 Query: 133 YQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 + ++ R E G+ R R + D++ F + + R K Sbjct: 355 CEHAIQHRFESSGSLTGLERVRGMKLTDSHIFVRSDQIEDEF-------------RSTYK 401 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDIISLNSIVE 250 I ++ I D + L D + F D D S D+ Sbjct: 402 LISEVLKTFNIQIDYLS--LSLRDPNDKVKFYKDDLMWDKAESSLEKVLIDLGLKYEKRI 459 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D+ ++ + VS ++ F T+ D K Sbjct: 460 GDAAFYGPKLDI---QIKTAQNHEITVSTIQLDFLMPNKFD--------LTYIDKDQKLV 508 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 M G + I + + + +AP ++ +I I + + I+ Sbjct: 509 RPIMIHR--GLIGTYERFIATLLEQTKGVLSLWLAPKQVEIIPI---SESNLEYANLIHQ 563 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +L K D E++ + A P Q+++G+K V ++ + + + + + Sbjct: 564 KLKKEFIRSHIDLRDERLSYKIRDAQTKKVPYQLVLGNKEVENNTITYRQYGSDAQITVP 623 Query: 431 LEEVINYASHRFSNNR 446 ++E I+ + ++ + Sbjct: 624 IQEFIDMLKQQINDKK 639 >gi|33866303|ref|NP_897862.1| prolyl-tRNA synthetase [Synechococcus sp. WH 8102] gi|81835080|sp|Q7U5D6|SYP_SYNPX RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|33639278|emb|CAE08286.1| Prolyl-tRNA synthetase [Synechococcus sp. WH 8102] Length = 593 Score = 213 bits (541), Expect = 7e-53, Method: Composition-based stats. Identities = 109/244 (44%), Positives = 147/244 (60%), Gaps = 3/244 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P +AEI SH+L+LR G I + GIY++LP+ K L + IIREE Sbjct: 1 MRVSRLMLVTLRDVPAEAEITSHQLLLRGGFIRRVGSGIYAYLPMMWKVLQRITTIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 NR GA+E +P L ++LW SGR+ Y M L DR + + GPTHEEV+T + Sbjct: 61 MNRAGALETLLPQLHPSELWQRSGRWQGYTAGEGIMFHLEDRQGRELGLGPTHEEVITSL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP YQ+Q KFRDE+RPRFG+MR REF+MKDAYSF + +Y M Sbjct: 121 AGELLRSYRQLPVNLYQVQTKFRDEIRPRFGLMRGREFIMKDAYSFHADEADLQATYAVM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y RIF R GL+++P+ A+SG IGG S EF+V A+ GE + S D + Sbjct: 181 DQAYRRIFERCGLEAVPVDADSGAIGGAASQEFMVTAEAGEDLILISDDGAYAANQEKAV 240 Query: 238 DFDD 241 D Sbjct: 241 SIPD 244 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 88/172 (51%), Gaps = 1/172 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P+ + RGIEVGHIF G KYS + F +G+D MG YGIG R+ A +E Sbjct: 422 PDARLQEKRGIEVGHIFQLGRKYSQALDCCFTNENGRDEPFWMGCYGIGVSRLAQAAVEQ 481 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 HD GI WP ++AP+++ ++ HD D + +YA L + G DV DD E+ G + Sbjct: 482 HHDDGGIRWPAAIAPYEVIVVIANNHDDAQTDLGDTVYATLLEAGIDVLLDDRKERAGVK 541 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 F ADL+G P ++++G + ++ VE+ R + E I Sbjct: 542 FKDADLIGIPWRLVIG-RDAAEGTVELVQRSNREMRKLPHGEAIGELLKALR 592 >gi|315586098|gb|ADU40479.1| threonine--tRNA ligase [Helicobacter pylori 35A] gi|317179509|dbj|BAJ57297.1| threonyl-tRNA synthetase [Helicobacter pylori F30] Length = 612 Score = 213 bits (541), Expect = 7e-53, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 151/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ WLP G + + ++ + G Sbjct: 207 YLFQIEEAKKRDHRKLGVELGLFS-FDDEIGAGLPLWLPKGARLRKRIEDLLSKALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + L Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCS-----FEQIQSEVSAILDF 379 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + I + + T + + + + Sbjct: 380 --------------THKIMQAFDFSYEMELSTRPAKSIGDDKVWEKATNALKEALKEHRI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 DYKIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + Sbjct: 475 EHNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHHA 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + +A+ P+ +++G++ V + I+ R Sbjct: 529 FALKLKEALKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 589 QAQYKMPLKEFLNMVESKMQE 609 >gi|126313772|ref|XP_001370758.1| PREDICTED: similar to Threonyl-tRNA synthetase-like 1 [Monodelphis domestica] Length = 717 Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats. Identities = 81/458 (17%), Positives = 141/458 (30%), Gaps = 57/458 (12%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + RD L H+ S G +LP G + + + IR+E R G E Sbjct: 292 QREEAAARDHRRIGKDQELF--FFHELSPGSCFFLPRGTRVYNALMTFIRDEYARRGFSE 349 Query: 69 MSVPTLQSADLWVESGRYDSYGKEML----------------RLADRNDKAMIYGPTHEE 112 + PTL S LW +SG + Y +M + + P + Sbjct: 350 VRTPTLFSTKLWEQSGHWKHYSGDMFVLRPPDPDGPADCQNNCSTNHPQSMLALKPMNCP 409 Query: 113 VMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSK 171 IF +S+R LP R E G+ R R F DA+ F + Sbjct: 410 AHCLIFAHRPRSWRELPLRLADFGALHRTEASGGLGGLTRLRRFQQDDAHIFCAQDQLES 469 Query: 172 HSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 ++ G F ++ T + D Sbjct: 470 E-IRGCLDFLRSVYTVFGFS------------------FHLVLSTRPSSFLGESFLWDQA 510 Query: 232 IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 D+ + A Y DVH + D+L + ++ F Sbjct: 511 EQILQQALDEFGEPWDLNPGDGAFYGPKIDVH---IQDALGRPHQCGTIQLD----FQLP 563 Query: 292 TKYSLPMSATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 ++ + G G + V + +G++ + V+ + G WP ++P + Sbjct: 564 LRF----GLQYMGQAGVLERPVLIHRAVLGSVERMLGVLT---ENYGGKWPLWLSPLQAM 616 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSK 409 +I + A + ++ L G D D + + A L + Q +VG + Sbjct: 617 VIPVGAEQEG---YAREVQEALQAAGLAGDLDKDPSLTLSRRVRRAQLSQYNFQFVVGPR 673 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 S V I+ R +G + + E + P Sbjct: 674 EQSRGTVNIRTRDSGQLGERPVAEAVVRLRELRDARVP 711 >gi|315604309|ref|ZP_07879375.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310] gi|315314015|gb|EFU62066.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310] Length = 677 Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats. Identities = 71/451 (15%), Positives = 140/451 (31%), Gaps = 44/451 (9%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 I + RD +L L + + G+ + P G + + + + R G Sbjct: 245 RIKEAERRDHRRLGVELDLFS-FPEEIGPGLVVFHPKGGILRHEIESYVTDRHKRAGFDF 303 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHEEVMTD 116 + P + L+ SG Y M + + + + Sbjct: 304 VHTPEISKGGLFHTSGHLPYYADTMFPPMLVDEERDADGNVTKAGQEYYLKAMNCPMHNL 363 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IFRS +SYR LP FY++ +R E G+ R R F D++++ + S+ Sbjct: 364 IFRSRGRSYRELPLRFYELGHDYRYEKSGVVHGLTRMRGFTQDDSHTYCTPEQASQE-IR 422 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 +L I GLK + + G +FI + + Sbjct: 423 TQIEFFLSILSAFGLKDFYLELSTRDEDGKKKDKFIGSDED-----------WAAATKAL 471 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 A Y + ++ D++ ++S + Sbjct: 472 QDACAATGLDLVPDPGGAAFYGPKV---SVQVKDAIGRTWQMSTIQYDFNQP-------- 520 Query: 296 LPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + ADG + S +G++ V+ + +P ++P ++ LI + Sbjct: 521 ERFDLEYTAADGTRQRPVMIHSAKLGSVERFIGVLT---EHYAGAFPAWLSPVQVRLIPV 577 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 + + A+L + G V D ++ G + A P +I G + V Sbjct: 578 A---EAFDGYVADVAAKLRERGVRVETDLSDDRFGKKIRNASKDKIPFTLIAGGEDVEAG 634 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + R + +E ++ Sbjct: 635 AVSFRLRDGSQHNGVPVERAVDLIVAHVEER 665 >gi|323339428|ref|ZP_08079710.1| proline--tRNA ligase [Lactobacillus ruminis ATCC 25644] gi|323093139|gb|EFZ35729.1| proline--tRNA ligase [Lactobacillus ruminis ATCC 25644] Length = 572 Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats. Identities = 113/278 (40%), Positives = 158/278 (56%), Gaps = 5/278 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE SH+LMLR G I Q + G+Y++LPL + L N+ AIIREE Sbjct: 1 MKQSKLLIPTLKEVPSDAEAISHQLMLRGGYIKQITAGMYAYLPLAYRVLRNIEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A EM VP A+LW ++GRY++YG + + DR+++ I GPTHEE T I R Sbjct: 61 MENIDAAEMLVPAALPAELWQQTGRYETYGPNLFKFQDRHERDFILGPTHEETFTTIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +K+Y+ LP T YQIQ K+RDE RPRFG++R REF+MKDAYSF E ++ M + Sbjct: 121 AVKTYKKLPITLYQIQTKYRDENRPRFGLLRGREFIMKDAYSFHAEEESLDKTFRDMDSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE----N 236 Y +F+R+GL + ++G +GG+ S EF+ +A GE V S D+ E Sbjct: 181 YTNVFNRVGLNFRSIIGDAGAMGGNNSKEFMAIAPIGEDTVVYSD-ESDYAANLEMAQNK 239 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 +++ P A T D E L S Sbjct: 240 RTMPKSHETLGELQKVATPGAKTIDEVAEFLGSSADRE 277 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 69/228 (30%), Positives = 112/228 (49%), Gaps = 2/228 (0%) Query: 218 ETQVFCSKDFMDFPIPSENTDFDDIISLNSIV-EQWTAPYAATSDVHNEKLFDSLPENKR 276 E ++ D + S + D LN+ + ++ + A E + + Sbjct: 341 EIEILADLDVENMANASVGANEDGFHYLNANLGRDFSVTHFADLRTVQEGEISPDGKGRL 400 Query: 277 VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 RGIE+GHIF GT+YS + A +G+ + MG YGIG R+++A++E D Sbjct: 401 KFTRGIEIGHIFKLGTRYSKDLDAVVLDENGRQLPIIMGCYGIGVSRLLSAIVEQHSDEN 460 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 GI+WP S+APF + +I + + + EK+ L G V DD E+ G +FA +D Sbjct: 461 GIVWPRSIAPFDVHVIPVNVKKEEQVELSEKVTELLENAGYKVLVDDRKERPGVKFADSD 520 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 L+G P ++ VG K ++ VEIK R TG ++ L+E++N Sbjct: 521 LIGIPARITVGKK-AAEGIVEIKLRRTGETLEVKLDELLNSLQILLKE 567 >gi|227504970|ref|ZP_03935019.1| threonyl-tRNA synthetase [Corynebacterium striatum ATCC 6940] gi|227198420|gb|EEI78468.1| threonyl-tRNA synthetase [Corynebacterium striatum ATCC 6940] Length = 687 Score = 212 bits (540), Expect = 8e-53, Method: Composition-based stats. Identities = 64/455 (14%), Positives = 136/455 (29%), Gaps = 48/455 (10%) Query: 5 KYFLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + + ++ + RD +L L + + G + P G + R + Sbjct: 253 EAYQHMIAEAEKRDHRRLGQELDLFS-FPDEIGSGFPVFHPNGAVVRMEMEEHSRRRHIQ 311 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND------------KAMIYGPTHE 111 G +S P L DL+ +SG D Y M + + P + Sbjct: 312 DGYSFVSTPHLTKGDLFKKSGHLDFYADGMFPPMQLDGEYDEDGNCTKQPQDYYAKPMNC 371 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF S +SYR LP ++ +R E G+ R+R F D++ + + Sbjct: 372 PMHNLIFASRGRSYRELPLRLFEFGTVYRYEKSGVIHGLTRARGFTQDDSHIYCTPEQLE 431 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + + + GL + + + S + + Sbjct: 432 DELTK-VLDFIISLLKDYGLDDFYLELST----------------KDPNKYVGSDEIWER 474 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + A Y + + D++ ++S ++ F Sbjct: 475 STSILQSVAEKSGLELVPDPAGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FNL 527 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 ++ L +A+ K + + G++ V+ + G W I Sbjct: 528 PERFELEYTAS---DGTKQRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVVGIP 584 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 + E I A+L K G D +++ + P ++ G + Sbjct: 585 VA------DEFSPHLEAIAAKLRKRGIRADVDTSDDRMQKKIRNHTTGKVPFMLLAGERD 638 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + V + + ++E I + + Sbjct: 639 VDANAVSFRFLDGSQVNGVPVDEAIELIAAWVAER 673 >gi|114659241|ref|XP_001144153.1| PREDICTED: hypothetical protein [Pan troglodytes] gi|332844841|ref|XP_001144319.2| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic isoform 1 [Pan troglodytes] Length = 707 Score = 212 bits (540), Expect = 8e-53, Method: Composition-based stats. Identities = 74/447 (16%), Positives = 150/447 (33%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + + + +E RD + L H S G +LP G + + IREE Sbjct: 290 KMMRDWEKFQEEAKNRDHRKIGKEQELF--FFHDLSPGSCFFLPRGAFIYNTLTDFIREE 347 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ E+ P + ++ LW SG + Y + M D P + +F Sbjct: 348 YHKRDFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIEKDT-FALKPMNCPGHCLMFAH 406 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R +P F + R+EL G+ R R F DA+ F + + Sbjct: 407 RPRSWREMPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQ-IEEEIKGCLR 465 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G F + T + + Sbjct: 466 FLQSVYSTFGFS------------------FQLNLSTRPENFLGEIEMWNEAEKQLQNSL 507 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D + A Y D+ K+ D++ + + ++ F +++L Sbjct: 508 MDFGEPWKMNPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRFNLTYV 560 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K V + +G++ + A++ + G WP ++P ++ +I + Sbjct: 561 SK--DGDDKKRPVIIHRAILGSVERMIAILS---ENYGGKWPFWLSPRQVMVIPVGP--- 612 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C ++ + + G D D + + A L + ++VG K D+ V + Sbjct: 613 TCEKYALQVSSEFFEEGFMADVDLDHNCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNV 672 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R I ++ + I+ + Sbjct: 673 RTRDNKIHGEILVTSAIDKLKNLKKTR 699 >gi|311742315|ref|ZP_07716124.1| threonine--tRNA ligase [Aeromicrobium marinum DSM 15272] gi|311313943|gb|EFQ83851.1| threonine--tRNA ligase [Aeromicrobium marinum DSM 15272] Length = 661 Score = 212 bits (540), Expect = 8e-53, Method: Composition-based stats. Identities = 72/444 (16%), Positives = 140/444 (31%), Gaps = 33/444 (7%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 I + RD +L L + + G+ + P G + +R G Sbjct: 249 LFRIEEAQRRDHRRLGTELDLFS-FPDEIGSGLPVFHPRGGVIKREMEDYVRRRHIEEGF 307 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P + L+ SG YG+ M D + + + IFRS +SYR Sbjct: 308 EYVGTPHIAKEGLFHTSGHLPYYGEGMFPALDVDGSDYRLKAMNCPMHNLIFRSRGRSYR 367 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP F++ +R+E G+ R R F D++S+ + + L + Sbjct: 368 ELPLRFFEFGHVYRNEKSGVIHGLTRVRGFAQDDSHSYVTPEQAPGE-IRHLLQFVLSLL 426 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 GL + + D + + S + + Sbjct: 427 RDFGLDDFYLELSTR--------------DASKDKFIGSDEDWATATKVLEDVCLESGLE 472 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 A Y + + D++ + ++S + F + + A Sbjct: 473 LVPDPGGAAYYGPKV---SVQARDAIGRSWQMSTIQYD------FNQPSPERFNLEYVAA 523 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG + S G++ V+ + +P +AP ++ I + + D Sbjct: 524 DGSRRQPVMIHSAKFGSIERFMGVLV---EHYAGAFPPWLAPVQVVGIPVA---ERHADY 577 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + ARL +G D E++ + A P ++ G + V ++R Sbjct: 578 LVNLTARLRALGIRAEVDHSDERMQKKIRNAQTQKVPFMLLAGDNDIDGGAVSFRYRNGE 637 Query: 425 IREDMSLEEVINYASHRFSNNRPV 448 ++L+E I + V Sbjct: 638 QDNGVALDEAIERIVAAVRDRVQV 661 >gi|319760426|ref|YP_004124364.1| prolyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF] gi|318039140|gb|ADV33690.1| prolyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF] Length = 595 Score = 212 bits (540), Expect = 8e-53, Method: Composition-based stats. Identities = 95/215 (44%), Positives = 145/215 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L L+E P++ E SH+LMLR+GMI Q S G+Y+WLP+G + L V I+R+E Sbjct: 1 MRATQYLLTTLKEIPKNCETISHQLMLRSGMIRQISTGLYTWLPIGLRVLRKVENIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N IE+S+P +Q A+LW +SGR+ YG E+LR +R ++ + GPTHEE+++++ Sbjct: 61 MNNISFIEISMPIIQPANLWKQSGRWSEYGPELLRFKNRVNQEFVLGPTHEEMISNLICK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ P YQ+ K+RDE+RPRFG++R++EF MKD YSF + +++YN ++ Sbjct: 121 EIISYKQFPIKLYQMNTKYRDEIRPRFGLIRAKEFTMKDGYSFHTNNKCLQNTYNNIYHQ 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLAD 215 Y IF+R+GL ++A++G GG LSHEF + Sbjct: 181 YHTIFNRIGLNFHVVQADTGNTGGTLSHEFQAYPE 215 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 58/163 (35%), Positives = 95/163 (58%), Gaps = 2/163 (1%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IE+GHIF G KYS + + + + + + MG YGIG R++ +IE ++D GIIWP Sbjct: 430 IEIGHIFQLGDKYSRSIYSCIQKYNKFNIKIIMGCYGIGITRIIPTIIEQNYDQYGIIWP 489 Query: 342 DSVAPFKISLINIKAHDQV-CRDACEKIYARLSKV-GCDVFWDDMGEQIGSQFAVADLLG 399 DS+APFK+++I I H V R+ E++Y + + G DVF D E G FA DL+G Sbjct: 490 DSIAPFKLAIIPINMHVSVNVRNTTEELYTQFKSIIGSDVFIYDRKENPGIMFADIDLIG 549 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 P +++ + +++ +VE KHR T + L+ ++ + ++ Sbjct: 550 IPHILVISDRNLNNQEVEYKHRKTRTTTKIKLDVILQFLINKL 592 >gi|258653602|ref|YP_003202758.1| threonyl-tRNA synthetase [Nakamurella multipartita DSM 44233] gi|258556827|gb|ACV79769.1| threonyl-tRNA synthetase [Nakamurella multipartita DSM 44233] Length = 699 Score = 212 bits (540), Expect = 8e-53, Method: Composition-based stats. Identities = 65/449 (14%), Positives = 125/449 (27%), Gaps = 49/449 (10%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + G+ + P G + R + G + Sbjct: 261 EAERRDHRKLGVELDLFS-FPDELGSGLPVFHPKGGIIRKELEDYSRAKHIAAGYSFVYT 319 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDIFR 119 P + A L+ SG D Y M + + P + + IFR Sbjct: 320 PHITKAKLYEISGHLDWYADGMFPAMHLDAELGPDGEVRKPGQDYYLKPMNCPMHDLIFR 379 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 S +SYR LP ++ +R E G+ R R DA+ F + + Sbjct: 380 SRGRSYRELPLRMFEFGAVYRYEKSGVIHGLTRVRGMTQDDAHIFCTREQMRDEL-TSLL 438 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L + GL + + E + + + + Sbjct: 439 RFVLELLADYGLDDYYLELSTR----------------NEDKYVGTDENWAVATETLAEV 482 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + A Y + + D+L ++S ++ F ++ Sbjct: 483 ARESGLDLVDDPGGAAFYGPKI---SVQARDALGRTWQMSTIQLD----FNLPERF---- 531 Query: 299 SATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + G DG + G++ V+ + G W V I + Sbjct: 532 ELEYTGPDGSKQRPVMIHRALFGSVERFFGVLTEHYAGAFPAWLSPVQVVGIPVA----- 586 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D + + +L G D +++ + P ++ G K V+ V Sbjct: 587 -DAFGDYLQDVVDQLVARGIRAEADHSDDRMQKKIRTHTTAKVPFLLLAGEKDVAAGAVS 645 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNNR 446 + R + + R Sbjct: 646 FRFRDGTQINGVPAAAAVQAIVDWVGQRR 674 >gi|169629982|ref|YP_001703631.1| threonyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977] gi|238688903|sp|B1MCK6|SYT_MYCA9 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|169241949|emb|CAM62977.1| Threonyl-tRNA synthetase [Mycobacterium abscessus] Length = 684 Score = 212 bits (540), Expect = 8e-53, Method: Composition-based stats. Identities = 64/453 (14%), Positives = 131/453 (28%), Gaps = 50/453 (11%) Query: 8 LPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E R D +L L + + G+ + P G + R + G Sbjct: 251 LELLEEAQRRDHRKLGVELDLFS-FPDEIGSGLPVFHPKGGIVRKELEDYSRAKHTAAGY 309 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVM 114 ++ P + +L+ SG D Y M + + P + + Sbjct: 310 EFVNTPHITKENLYQTSGHLDWYSDGMFPPMHIDAELNEDGTVRKPGQNYYLKPMNCPMH 369 Query: 115 TDIFRSHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHS 173 I+R+ +SYR LP ++ +R E G+ R R DA+ + + + Sbjct: 370 HLIYRARGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYTTREQMHEEL 429 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 + L + GL + + E + S + + Sbjct: 430 -TSLLRFVLDLLSDYGLDDFYLELST----------------KDEAKFVGSDEVWEEATK 472 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 + D A Y + + D+L + ++S ++ Sbjct: 473 TLEQVALDSGLQLVPDPGGAAFYGPKI---SVQAKDALGRSWQMSTIQLDFNMP------ 523 Query: 294 YSLPMSATFKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 + + ADG + G++ V+ + G W V I + Sbjct: 524 --ERFNLEYTAADGTRKQPVLIHRALFGSIERFFGVLTEHYAGAFPAWLSPVQAVGIPIA 581 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 I ++L G D +++ + P ++ G + V Sbjct: 582 ------DAHAPYLNDIVSQLKAQGIRAEVDSSDDRMNKKIVNHTNQRVPFLLLAGDRDVE 635 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + R + +E + + Sbjct: 636 AGAVSFRFRDRTQVNGVPRDEAVAAIVDWVNRR 668 >gi|317181405|dbj|BAJ59189.1| threonyl-tRNA synthetase [Helicobacter pylori F57] Length = 612 Score = 212 bits (540), Expect = 8e-53, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 151/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ WLP G + + ++ + G Sbjct: 207 YLFQIEEAKKRDHRKLGVELGLFS-FDDEIGAGLPLWLPKGARLRKRIEDLLSKALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + L Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCS-----FEQIQSEVSAILDF 379 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + I + + T + + + + Sbjct: 380 --------------THKIMQAFDFSYEMELSTRPAKSIGDDKVWEKATNALKEALKEHRI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 DYKIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + Sbjct: 475 EHNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHHA 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + +A+ P+ +++G++ V + I+ R Sbjct: 529 FALKLKEALKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 589 QAQYKMPLKEFLNMVESKMQE 609 >gi|255322659|ref|ZP_05363803.1| prolyl-tRNA synthetase [Campylobacter showae RM3277] gi|255300220|gb|EET79493.1| prolyl-tRNA synthetase [Campylobacter showae RM3277] Length = 570 Score = 212 bits (540), Expect = 8e-53, Method: Composition-based stats. Identities = 110/256 (42%), Positives = 155/256 (60%), Gaps = 1/256 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + P +E P+DA +ASHK +LR G Q G+Y++LPLG++ L+N+ I++EE Sbjct: 1 MKFSKLYAPTAKEAPKDASLASHKFLLRAGYAEQVGSGLYNFLPLGKRVLENIKNIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+S+ + SADLW ESGR+D YGKE+LR DR + + PT+EE + + R Sbjct: 61 LDEAGAQEISMSFVTSADLWRESGRFDVYGKELLRFKDRKENDFVLSPTNEESVVALVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQI KFRDE RPRFG++R REFLMKD YSF E ++ M + Sbjct: 121 KVTSYKQLPLNLYQINTKFRDEARPRFGLLRGREFLMKDGYSFHANAEDLDREFDLMEKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF RLGL +RA+SG IGG S EF+VLA++GE + ++ D+ E Sbjct: 181 YSKIFTRLGLNFRAVRADSGAIGGSGSKEFMVLANSGEDDIIVCENC-DYAANIEAATRA 239 Query: 241 DIISLNSIVEQWTAPY 256 + E A + Sbjct: 240 KRTTQAERPEADAAKF 255 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 70/183 (38%), Positives = 97/183 (53%), Gaps = 3/183 (1%) Query: 261 DVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ K D P ++GIEVGHIF GTKYS PM ATF +GK MG YG Sbjct: 389 DLTAVKAGDKCPCCGGNLSVSKGIEVGHIFKLGTKYSEPMGATFLDENGKAKPFIMGCYG 448 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R+VA +E+SHD KGIIW +++APFK +I D+ + +Y L G Sbjct: 449 IGVSRLVAVAVEASHDEKGIIWNETLAPFKFEIIVSNLKDEEGVKFAQGLYEDLRGAGVS 508 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G + + +L+GFP VIVG K +++ VE+ R +E + E++ Sbjct: 509 VLLDDRNERFGVKMSEFELMGFPYAVIVG-KGLAEGTVELVTRDGLAKETVKASEILARL 567 Query: 439 SHR 441 Sbjct: 568 KSL 570 >gi|329936661|ref|ZP_08286368.1| prolyl-tRNA synthetase [Streptomyces griseoaurantiacus M045] gi|329303891|gb|EGG47774.1| prolyl-tRNA synthetase [Streptomyces griseoaurantiacus M045] Length = 564 Score = 212 bits (540), Expect = 9e-53, Method: Composition-based stats. Identities = 112/272 (41%), Positives = 155/272 (56%), Gaps = 6/272 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE SHKL++R G + ++S GI+SWLPLG+K LDNV+ ++REE Sbjct: 6 RMSRLLVKTLRDDPADAETLSHKLLVRAGYVRRNSAGIWSWLPLGKKVLDNVSRVVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + S R++ YG + RL DR + GPTHEE+ T + + Sbjct: 66 DAIGAQEVLLPALLPKEPYEASARWEEYGDLLFRLKDRKGGEYLLGPTHEEIFTLVVKDQ 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SY++LP YQIQ K+RDE RPR GV+R REF MKD+YSFD T EG SY +Y Sbjct: 126 VSSYKDLPVMLYQIQTKYRDEARPRSGVLRGREFQMKDSYSFDTTDEGLAESYRLHREAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +IF RLGL + A SG +GG S EF+ A GE + D+ +E F Sbjct: 186 QKIFARLGLDYRIVSAVSGAMGGSASEEFLAPAAAGEDTFVDCPNC-DYAANTEAVTFAL 244 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 VE P A D + +SL E Sbjct: 245 T-----PVEGAAHPAAEELDTPDTPTIESLAE 271 Score = 137 bits (346), Expect = 3e-30, Method: Composition-based stats. Identities = 60/182 (32%), Positives = 90/182 (49%), Gaps = 6/182 (3%) Query: 261 DVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 DV + D P+ R IE+GHIF G KY+ G +GK V MGSYG Sbjct: 385 DVVVVEEGDPCPKCGTGLKLDRAIEIGHIFQLGRKYADTFQLDVLGQNGKPVRVTMGSYG 444 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R VAA+ E D +G+ WP +AP + + A + + + +L+ G Sbjct: 445 IGVSRAVAALAEQHADEQGLYWPKEIAPADVH--VVAAGKALQTELALDVSEKLAAAGVR 502 Query: 379 VFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 V D+ G G +F A+L+G P ++ G + + VE+K R TG RE++++EE I Sbjct: 503 VLVDERSGVSPGVKFTDAELIGVPQILVAGRRS-GEGVVELKDRRTGEREELTVEEAIAR 561 Query: 438 AS 439 + Sbjct: 562 LT 563 >gi|148241975|ref|YP_001227132.1| prolyl-tRNA synthetase [Synechococcus sp. RCC307] gi|166980166|sp|A5GSC0|SYP_SYNR3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|147850285|emb|CAK27779.1| Prolyl-tRNA synthetase [Synechococcus sp. RCC307] Length = 600 Score = 212 bits (540), Expect = 9e-53, Method: Composition-based stats. Identities = 121/285 (42%), Positives = 165/285 (57%), Gaps = 9/285 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S L L+++P +AEI SHKL+LR G I + + GIY++LPL + L V+AI+R+E Sbjct: 1 MRVSALLLVTLRDDPAEAEIPSHKLLLRGGYIRRVASGIYAYLPLMWRVLRKVSAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + GA+E +P LQ A+LW SGR+ Y M L DR D+ + GPTHEEV+T + Sbjct: 61 MDAAGALETLLPQLQPAELWQRSGRWSGYTAGEGIMFHLQDRQDRELGLGPTHEEVITAL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + E Y M Sbjct: 121 AADLLRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHASAEDLGRGYAAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y RIF R GL+ + ++A+SG IGG S EF+V A+ GE + S D + E Sbjct: 181 DQAYRRIFSRCGLQVVAVQADSGAIGGSASQEFMVTAEAGEDLILSSADGS-YAANQERA 239 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 SL + + AA D + D+L E + A + Sbjct: 240 -----ESLPAEPVPLQSATAAELDTPGQTSIDALVEAQGWHASQL 279 Score = 162 bits (411), Expect = 7e-38, Method: Composition-based stats. Identities = 59/178 (33%), Positives = 98/178 (55%), Gaps = 1/178 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P + + RGIEVGHIF G KYS + ATF G+D + MG YGIG R+ A +E Sbjct: 424 PSQQLQARRGIEVGHIFQLGLKYSEALGATFANEQGQDAPLWMGCYGIGVSRLAQAAVEQ 483 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 HD G++WP +APF++ ++ + + + E +Y +L + G DV DD E+ G + Sbjct: 484 HHDSAGMVWPVPIAPFEVVIVIASSKEAQQVELAEDLYGQLQQAGVDVLLDDRNERAGVK 543 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 F A+L+G P +++VG + + +VE+ R +G +++ ++++ R L Sbjct: 544 FKDAELIGIPWRLVVG-RGAVNGQVELVERCSGEKQEGPHQDLMAQLLQTLDQQRQGL 600 >gi|91204601|emb|CAJ70829.1| strongly similar to prolyl-tRNA synthetase [Candidatus Kuenenia stuttgartiensis] Length = 576 Score = 212 bits (540), Expect = 9e-53, Method: Composition-based stats. Identities = 119/265 (44%), Positives = 163/265 (61%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ +P L+E+P +AEI SHKLM+R G+I + + G Y++LPLG L+ V AI+REE Sbjct: 1 MKWSQTLIPTLKESPSEAEIDSHKLMIRAGLIRRITSGAYAYLPLGTLVLNKVIAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR+GAIE+ +P LQ DL ESGR D +G +++ DR+ K + PTHEEV+T I ++ Sbjct: 61 MNRSGAIEVFLPALQHLDLLKESGRLDVFGADLITFQDRHGKETVLSPTHEEVITYIVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP T YQIQ KFRDE+RPRFGV+RS+EF+MKDAYSFDL +G +SY M+ + Sbjct: 121 EINSYKQLPITLYQIQTKFRDEMRPRFGVLRSKEFIMKDAYSFDLDEKGLNNSYQLMYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R L I A+SG +GGD SHEF+V + GE + ++ Sbjct: 181 YCRIFDRCRLDYIIAEADSGAMGGDASHEFMVPSPVGEDILILCRNCGYSANRERAEAAP 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 N + + Y E Sbjct: 241 LPQQENYSLRKLEEIYTPDKRTIRE 265 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 71/194 (36%), Positives = 105/194 (54%), Gaps = 7/194 (3%) Query: 260 SDVHNEKLFDSLPENKRVSAR--GIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +++ D+ P V GIE+GH+F GTKY+ + A + ADGK+ MG Y Sbjct: 380 ANIRYVTQGDNCPHCNHVLEISQGIEIGHVFKLGTKYTSALKAHYLDADGKEKPKVMGCY 439 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK-VG 376 GIG R++AA+IE SHD GIIWP S+AP+ + +I + D +C DA IY ++ G Sbjct: 440 GIGVNRIIAAIIEISHDENGIIWPMSLAPYHVIIIPVNVKDTICMDAARSIYDDMTNMKG 499 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE---- 432 DV DD + G +F ADL+G P+++I+G K+ ++EIK R +G +E Sbjct: 500 IDVLLDDRDLRPGVKFKDADLIGIPVKIIIGKKYTETKELEIKLRKSGEVFLTHIENTKQ 559 Query: 433 EVINYASHRFSNNR 446 E+ H R Sbjct: 560 ELERILQHLIKTER 573 >gi|224283116|ref|ZP_03646438.1| threonyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171] gi|313140266|ref|ZP_07802459.1| threonyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171] gi|313132776|gb|EFR50393.1| threonyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171] Length = 676 Score = 212 bits (540), Expect = 9e-53, Method: Composition-based stats. Identities = 60/461 (13%), Positives = 129/461 (27%), Gaps = 54/461 (11%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L+E RD ++ L + + G+ + P G ++ + RE + Sbjct: 242 KAYQTRLEEAAKRDHRKLGAEMDLFS-FPEEIGPGLAVFHPKGAAVINAMEDYSREMHRK 300 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHE 111 + P + L+ SG Y M + P + Sbjct: 301 HHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEYDADGNITKPGADYYLKPMNC 360 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 361 PMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMK 420 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L + GL + + + S + + Sbjct: 421 DEL-TSLLTFVLNLLKDFGLSDFYLELST----------------KDPDKYVGSDEIWEE 463 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + A Y + + D++ +VS ++ F Sbjct: 464 ATRTLREVAEASHLDLVADPGGAAFYGPKI---SVQARDAIGRTWQVSTIQLD----FNL 516 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 ++ + DG + R + IE + + + Sbjct: 517 PERF----QLEYIAKDGT------HQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAP 566 Query: 351 LINIKAHDQVCRDACEKIY---ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + + V + + L D ++ G + A P +IVG Sbjct: 567 VQVLGV--PVADEFAPHLAGFVKSLEDEMVRCEIDYSDDRFGKKIRNASKSKVPFILIVG 624 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 + ++++ V + R + ++E V Sbjct: 625 EEDMNNNAVSFRFRDGSRLNGVPVDEAREKILAVIKKRAQV 665 >gi|308061413|gb|ADO03301.1| threonyl-tRNA synthetase [Helicobacter pylori Cuz20] Length = 612 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 152/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + G+ WLP G + + ++ + G Sbjct: 207 YLFQMEEAKKRDHRKLGVELGLFS-FDDEIGAGLPLWLPKGARLRKRIEDLLSKALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + L Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCS-----FEQIQSEVSAILDF 379 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + I + + T + + + + Sbjct: 380 --------------THKIMQAFDFSYEMELSTRPAKSIGDDKVWEKATNALKEALKEHRI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 DYKIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + R Sbjct: 475 EHNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHRA 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + +A+ P+ +++G++ V + I+ R Sbjct: 529 FALKLKEELKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVGTEILSIRDREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 589 QAQYKMPLKEFLNMVESKMQE 609 >gi|296454700|ref|YP_003661843.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. longum JDM301] gi|296184131|gb|ADH01013.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. longum JDM301] Length = 604 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 107/284 (37%), Positives = 156/284 (54%), Gaps = 2/284 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DA++ S KL+ R G I + + GI++WLPLG + L+ + AIIREE Sbjct: 7 RMSTMFLRTLREDPADADVDSAKLLQRAGYIRKAAPGIWTWLPLGLRVLNKIEAIIREEI 66 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+ P L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 67 NGIGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDM 126 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG + +Y +Y Sbjct: 127 YSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTIDEEGMRKAYYDERGAY 186 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF-- 239 RIF RL LK +P+ A SGP+GG S EF+ GE + + + + +T Sbjct: 187 ERIFQRLDLKYVPVFAMSGPMGGSASEEFLAPMPIGEDTFALAPSGKAWNVEALSTPELP 246 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 + S + P A T D E+ P + + Sbjct: 247 EIDASATPAASKEATPDAKTIDNMIERANADHPRTDGREWQASD 290 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 4/207 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLP 297 ++ + ++V + + D P+ RG+E+G +F G KYS Sbjct: 396 ENEVDYYNLVYGRDFKADGVVEAVEVRHGDMSPDGSGPLSFERGVEIGQVFQLGLKYSKA 455 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + +GK V MG YGIG RV+A + E+ HD G+ W SV + Sbjct: 456 LDLKVLDQNGKAVPVWMGCYGIGVSRVLACIAETHHDEAGLAW-PSVIAPAAVHVVATGK 514 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D V + EK+ A L G +V +DD + G +F A+L+G PL +VG +V+D + Sbjct: 515 DAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFKDAELIGVPLIAVVGRDYVNDGTI 574 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 EI+ R + + E + RF+ Sbjct: 575 EIRDRNGENKVAVPAAEAAGTLADRFA 601 >gi|308235415|ref|ZP_07666152.1| prolyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018] gi|311114822|ref|YP_003986043.1| proline--tRNA ligase [Gardnerella vaginalis ATCC 14019] gi|310946316|gb|ADP39020.1| proline--tRNA ligase [Gardnerella vaginalis ATCC 14019] Length = 602 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 108/283 (38%), Positives = 157/283 (55%), Gaps = 2/283 (0%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+ FL L+E+P DA++ S KLM R G I + + G+++WLPLG K L+ V AIIREE N Sbjct: 1 MSQLFLRTLREDPADADVTSAKLMQRAGYIRKSAPGVWTWLPLGLKVLNKVQAIIREEIN 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+ P L + + + R++ YG + RL DR++ + PTHEEV T + + Sbjct: 61 GIGAQEVHFPALLPREPYEATNRWEEYGDNIFRLKDRHEADYLLAPTHEEVFTLLVKDMY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP T YQIQ K+RDE RPR G++R REF+M+DAYSF + +G K +Y + +Y Sbjct: 121 SSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMQDAYSFSIDEDGLKSAYVEERAAYA 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--DFD 240 RIF RLG+K + + A SGP+GG S EF+ GE + + + + T D Sbjct: 181 RIFDRLGIKYVIVHAVSGPMGGSDSEEFLAPMAIGEDTFALAPSGKAWNVEALTTPEMQD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 S +E P A T + + D P + + Sbjct: 241 VDCSATPKMETLDTPDAKTIEALVKVSNDLHPREDGREWQASD 283 Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 4/208 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLP 297 +D + + V + + D P+ RG+E+G +F G KYS Sbjct: 394 EDGKHVYNAVYGRDFEADGVVEAAQVRDGDMSPDGSGPLSFERGVEIGQVFQLGLKYSKA 453 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + + +GK V MG YGIG RV+A + E+ HD G+ WP ++AP ++ ++ Sbjct: 454 LGLSVLNENGKAVPVWMGCYGIGVSRVIACLAETHHDDAGLAWPMAIAPAQVHVVATG-K 512 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 DQV DA EK+ LSK G +V +DD G +F A+L+G PL + G V++ + Sbjct: 513 DQVAFDAAEKVVEELSKQGIEVIFDDRPKVSPGVKFKDAELVGVPLIAVAGRDTVNNGTI 572 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSN 444 EI+ R E + ++E R Sbjct: 573 EIRDRNGSNVEAIPVDEAAARIVERVRE 600 >gi|109947952|ref|YP_665180.1| threonyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba] gi|123362536|sp|Q17VZ5|SYT_HELAH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|109715173|emb|CAK00181.1| thrS [Helicobacter acinonychis str. Sheeba] Length = 612 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 77/441 (17%), Positives = 150/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ WLP G + + ++ + G Sbjct: 207 YLFQIEEAKKRDHRKLGVELGLFS-FDDEIGAGLPLWLPKGARLRKRIEDLLSKALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + + + Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQSE--VSAILDFTHK 382 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + S M + P + + + Sbjct: 383 IMKAFDFSYEMELSTRPAKS-----------------IGDDKVWEKATNALKEALKEHHI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 NYKIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I LI I + Sbjct: 475 EHNNAEQPVMIHRAILGSFERFIAILSEHFWGNFPFF---VAPTQIVLIPIN---EEHHV 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + +A+ P+ +++G++ + + I+ R Sbjct: 529 FALKLKEELKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEMETEILSIRDREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 589 QAQYKMPLKEFLNMVESKMQE 609 >gi|326692543|ref|ZP_08229548.1| prolyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773] Length = 571 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 103/235 (43%), Positives = 146/235 (62%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+L+L+ G I + G++++LPL Q+ L+ + AIIREE Sbjct: 1 MKQSKLLMPTLREVPADAEVKSHQLLLKAGFIRPVAAGMFAYLPLAQRVLNKIEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R A EM VP + A+LW +SGRY++YG + + +R + I GPTHEE T + Sbjct: 61 MDRIDANEMLVPEILPAELWEKSGRYETYGPALYKFKNRQARDFILGPTHEETFTQLMAD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQ+Q KFRDE RPRFG++R+REF+MKDAYSF G +Y+ M + Sbjct: 121 DIKSYKKLPLIVYQLQAKFRDENRPRFGLLRTREFIMKDAYSFSADQAGLDQAYHDMEAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R+GL + ++G +GG S EF A GE + S D+ E Sbjct: 181 YTNIFDRIGLSYRAIVGDAGAMGGSDSKEFSAPAAAGEDIIAYSD-ASDYAANLE 234 Score = 147 bits (370), Expect = 5e-33, Method: Composition-based stats. Identities = 61/158 (38%), Positives = 90/158 (56%), Gaps = 1/158 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 + V RGIE+GHIF GT+YS M A +G+ + MGSYGIG R+++A+ E Sbjct: 398 GKGHLVFTRGIEIGHIFKLGTRYSKTMGAQILDENGRQIDMIMGSYGIGVSRLLSAIAEQ 457 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 D G++WP SVAPF + ++ + D+ ++ A L+ G DV DD E+ G + Sbjct: 458 MADDDGLVWPASVAPFDVHIVPVNLKDEDQARITSQLEAELTAQGLDVLVDDRKERAGVK 517 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 FA ADL+G P+++ VG K D VE+K R + +M Sbjct: 518 FADADLIGLPIRITVGKKAAED-VVEVKVRASNTNIEM 554 >gi|220917084|ref|YP_002492388.1| threonyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1] gi|254783505|sp|B8J823|SYT_ANAD2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|219954938|gb|ACL65322.1| threonyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1] Length = 650 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 79/446 (17%), Positives = 136/446 (30%), Gaps = 49/446 (10%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L T H+ + G WLP G + + +R + G Sbjct: 238 LAKLEEVKKRDHRRLGPQLGLFT--FHEFAPGAPFWLPAGTVLYNVLEDAMRRLVLKNGY 295 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLAD---------RNDKAMIYGPTHEEVMTDI 117 E+ P L + LW SG + Y + M + D + + P + I Sbjct: 296 QEVKTPLLFNKRLWETSGHWGKYRENMFLVVDSESDPALPLEDRCSFSLKPMNCPSHHLI 355 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 +R +SYR LP ++ R+E G+ R R+F DA+ + + + + Sbjct: 356 YRMDKRSYRELPVRYFTTDALHRNEASGSLGGLTRVRQFEQDDAHIYLREEQVTDE-VLR 414 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 +F ++ GL F T Q D Sbjct: 415 IFELMKVVYGAFGLG------------------FEATFSTRPEQRIGDDALWDRAEALLR 456 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 D ++ A Y D+ + DSL + ++ Sbjct: 457 KSLDATGLKWTLNAGDGAFYGPKIDML---VTDSLGRKWQTCTIQLDYAAP--------E 505 Query: 297 PMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 TF G D K+H + G+ A++ + G W + Sbjct: 506 RFDLTFVGEDNKEHRPVVIHRAIYGSFERFVAILVEHYAGAFPAW------LAPVQARVV 559 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + L G V D +++G++ A L P ++VG K V Sbjct: 560 TVSDRFEAWAREAGEALQARGWRVEVDASSDKLGAKIRNAQLAKIPFTLVVGEKEVEAKG 619 Query: 416 VEIKHRLTGIREDMSLEEVINYASHR 441 V + + M LE + Sbjct: 620 VSPRRHGGEDLKTMPLETFAELMARE 645 >gi|295396075|ref|ZP_06806258.1| threonine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030] gi|294971016|gb|EFG46908.1| threonine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030] Length = 667 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 67/457 (14%), Positives = 137/457 (29%), Gaps = 44/457 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + I + RD +L L + + G+ + P G + +R G Sbjct: 241 YQVRIAEAERRDHRRLGAELDLFS-FPDELGSGLPVFHPKGGVIKREMEDYVRARHIEEG 299 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEV 113 + P + L+ SG YG+ M + + + + Sbjct: 300 FEYVGTPHISKEALYYTSGHLPYYGENMFPAMQVDEQRDENGEIIKQGQPYRLKAMNCPM 359 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 I+RS +SYR+LP ++ +R+E G+ R R D++S+ + + Sbjct: 360 HNLIYRSRGRSYRDLPLRLFEFGTVYRNEASGVVHGLTRVRALTQDDSHSYVAVEDAASE 419 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 + L + GL + + G +++FI + D Sbjct: 420 -IKHLLDFMLSLLRDFGLDDFYLELSTRDAVGKKANKFIGSDEQ-----------WDEAT 467 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + A Y + + D++ ++S ++ Sbjct: 468 RTLEEVARATGLELVPDPGGAAFYGPKI---SVQARDAIGRTWQMSTVQLDFNQP----- 519 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 ++ ADG + S G++ V+ + G +W V + + Sbjct: 520 ---ERFDLEYQAADGSRKRPVMIHSAKFGSIERFLGVLTEHYAGAFPVWLSPVQAIMVPV 576 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 E+I +L G V DD ++ + A P +I G + Sbjct: 577 A------DEFLPYVEEIAQKLKAHGIRVEIDDSTDRFPKKIRNASKSKVPYTLIAGGEDR 630 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 V + R + +++ + V Sbjct: 631 DAHAVSFRFRDGSQENGVPVDQAVERIVDAIKTKAQV 667 >gi|223040968|ref|ZP_03611229.1| prolyl-tRNA synthetase [Campylobacter rectus RM3267] gi|222877765|gb|EEF12885.1| prolyl-tRNA synthetase [Campylobacter rectus RM3267] Length = 570 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 110/256 (42%), Positives = 155/256 (60%), Gaps = 1/256 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + P +E P+DA +ASHK +LR G Q G+Y++LPLG++ L+N+ I++EE Sbjct: 1 MKFSKLYAPTAKEAPKDASLASHKFLLRAGYAEQVGSGLYNFLPLGKRVLENIKNIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+S+ + SADLW ESGR+D YGKE+LR DR + + PT+EE + + R Sbjct: 61 LDEAGAQEISMSFVTSADLWRESGRFDVYGKELLRFKDRKENDFVLSPTNEESVVALVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQI KFRDE RPRFG++R REFLMKD YSF E ++ M + Sbjct: 121 KVTSYKQLPLNLYQINTKFRDEARPRFGLLRGREFLMKDGYSFHANAEDLDREFDLMEKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF RLGL +RA+SG IGG S EF+VLA++GE + ++ D+ E Sbjct: 181 YSKIFTRLGLNFRAVRADSGAIGGSGSKEFMVLANSGEDDIIVCENC-DYAANIEAATRA 239 Query: 241 DIISLNSIVEQWTAPY 256 + E A + Sbjct: 240 KRTTQAERPEADAAKF 255 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 68/183 (37%), Positives = 99/183 (54%), Gaps = 3/183 (1%) Query: 261 DVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ K D P ++GIEVGHIF GTKYS PM+ATF +GK MG YG Sbjct: 389 DLTAVKAGDKCPCCGGNLSVSKGIEVGHIFKLGTKYSEPMNATFLDENGKAKPFIMGCYG 448 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R+VA +E+ HD KGIIW ++++PFK +I D+ + +Y L + G Sbjct: 449 IGVSRLVAVAVEAKHDEKGIIWNETLSPFKFEIIISNLKDEEGVKFAQGLYEDLREAGVS 508 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G + + +L+GFP VIVG K +++ VE+ R ++E + E++ Sbjct: 509 VLLDDRNERFGVKMSEFELMGFPYAVIVG-KGLAEGTVELVTRGGLVKETVKASEILARL 567 Query: 439 SHR 441 Sbjct: 568 KSL 570 >gi|260591627|ref|ZP_05857085.1| threonine--tRNA ligase [Prevotella veroralis F0319] gi|260536427|gb|EEX19044.1| threonine--tRNA ligase [Prevotella veroralis F0319] Length = 649 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 80/450 (17%), Positives = 151/450 (33%), Gaps = 38/450 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L + KG+ WLP G + + ++R Sbjct: 232 EYLVMLEEAKKRDHRKIGKEMELFM-FSDRVGKGLPIWLPKGTQLRLRLQELLRRLLRPY 290 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + +L+V SG Y YGK+ + D+ + P + +++ Sbjct: 291 NYQEVITPGIGGKNLYVTSGHYAHYGKDAFQPIHTPEEDEEYMLKPMNCPHHCEVYAYKP 350 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + FR E G+ R R F DA+ F P+ K + Sbjct: 351 RSYKDLPLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVR-PDQVKAEFETNIDII 409 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L++F G + + D + + + D + + + Sbjct: 410 LKVFATFGFDNYEAQISLR--------------DPNDKEKYIGSDEVWEESEAAIKAACE 455 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + VE A Y D + D++ ++ ++ F Sbjct: 456 EKGLKARVELGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLPNRF--------KL 504 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D + G++ AV+ G +W + I + Sbjct: 505 EYTAEDNTKKTPVMIHRAPFGSLERFTAVLIEHTAGHFPLW------LTPDQVAILPISE 558 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D K+ A DD E+IG + +L P VIVG K + V ++ Sbjct: 559 KYNDYARKVKAYFDAHDVRSIMDDRNEKIGRKIRDNELKRVPYMVIVGEKEAAQGLVSMR 618 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNRPVL 449 + G + M++EE + + L Sbjct: 619 QQGGGEQATMTMEEFTKRINDEVAEQLKTL 648 >gi|146304348|ref|YP_001191664.1| threonyl-tRNA synthetase [Metallosphaera sedula DSM 5348] gi|172046910|sp|A4YH38|SYT_METS5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|145702598|gb|ABP95740.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Metallosphaera sedula DSM 5348] Length = 541 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 82/442 (18%), Positives = 162/442 (36%), Gaps = 37/442 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + + D I ++ L + + G+ + P GQ + + +RE G Sbjct: 124 YLQWLEKASETDHRIIGERMDLFSFH-EESGPGLVLFHPKGQLIRNEMINYMREINASMG 182 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ + LW SG YD+Y +ML ++D + P + I++S ++SY Sbjct: 183 YQEVYTSHVFRTVLWKISGHYDTYRDKMLIFQ-KDDDELGIKPMNCPAHILIYKSRVRSY 241 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F + +R E + +G++R+R F D + F + N + + Sbjct: 242 RDLPIRFSEFGNVYRWEKKGELYGLLRTRGFTQDDGHIFLREDQLKDEVKNLVRKT---- 297 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G + + T + S + + + ++ Sbjct: 298 ------------LDVLGKFGFKGEDVRINLSTRPDESIGSDEQWEKATKALLDVLKELNV 345 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E+ A Y D + DSL ++S ++ F ++ + Sbjct: 346 PYVVKEKEGAFYGPKIDFD---IRDSLNRWWQLSTIQVD----FNLPERF----KLEYVD 394 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + G++ + A++ GK W ++P ++ ++ I + D Sbjct: 395 EDGSKKRPVMVHRAIYGSLDRMIAILLEHFRGKLPTW---LSPVQVRVLPI---SEDNLD 448 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ L + G D GE + + G P VIVG K S+ KV I+ R Sbjct: 449 YAKRVMDVLVQRGIRTEIDPSGETLSKRIKRGYDDGVPYLVIVGRKEASEEKVTIRARGN 508 Query: 424 GIREDMSLEEVINYASHRFSNN 445 + + L ++ S N Sbjct: 509 VEIKGVPLSRFVDELSLEIGNR 530 >gi|88597079|ref|ZP_01100315.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25] gi|88190768|gb|EAQ94741.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25] gi|315927040|gb|EFV06395.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 568 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 112/271 (41%), Positives = 159/271 (58%), Gaps = 4/271 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 1 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 61 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 121 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ E Sbjct: 181 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICENC-DYAANVEAA--- 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 E+ A YA+ N K DSL Sbjct: 237 KRAKKTCQDERPEANYASKFHTPNIKTIDSL 267 Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 64/223 (28%), Positives = 110/223 (49%), Gaps = 6/223 (2%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS---DVHNEKLFDSLPEN--KRVSA 279 ++DF + +E + + D+ K D + K + Sbjct: 346 DFYIDFELENEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLIEVKEGDCCVKCGAKLKQS 405 Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE++HD KG I Sbjct: 406 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEANHDEKGCI 465 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W ++APF + +I D+ + K+Y L+ +G +V DD E+ G + +L+G Sbjct: 466 WNKTLAPFVLEIIVSNLKDEKALEFANKLYRDLTNLGLEVLLDDRNERFGVKMNDFELMG 525 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 FP +++G K + ++++E+ R ++E + +E++ + Sbjct: 526 FPYALVIG-KGLENNEIELIQREGLVKELIKTDELMEILKKKV 567 >gi|315057961|gb|ADT72290.1| Prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3] Length = 568 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 112/271 (41%), Positives = 159/271 (58%), Gaps = 4/271 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 1 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 61 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 121 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ E Sbjct: 181 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICENC-DYAANVEAA--- 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 E+ A YA+ N K DSL Sbjct: 237 KRAKKTCQDERPEANYASKFHTPNIKTIDSL 267 Score = 154 bits (389), Expect = 3e-35, Method: Composition-based stats. Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 6/223 (2%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS---DVHNEKLFDSLPEN--KRVSA 279 ++DF + +E + + D+ K D + K + Sbjct: 346 DFYIDFELENEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLIEVKEGDCCVKCGAKLKQS 405 Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF G KYS M+A F +GK MG YGIG R++A E+SHD KG I Sbjct: 406 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVATEASHDEKGCI 465 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W ++APF + +I D+ + K+Y L+ +G +V DD E+ G + +L+G Sbjct: 466 WNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMNDFELMG 525 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 FP ++VG K + +++E+ R I+E + +E++ + Sbjct: 526 FPYALVVG-KGLEKNEIELIQREGLIKELIKTDELMEILKKKV 567 >gi|313829616|gb|EFS67330.1| prolyl-tRNA synthetase [Propionibacterium acnes HL063PA2] Length = 581 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 105/271 (38%), Positives = 152/271 (56%), Gaps = 6/271 (2%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+ F +E P DAE+ SH+ ++R G I + + G+YSWLPLG + + + AI REE Sbjct: 1 MSQLFARPRREAPADAEVPSHRWLVRAGYIRRVAPGVYSWLPLGLRVMRRIEAICREEMA 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+S P L ++D + E+GR+ YG + RL DR M+ GPTHEE+ T + + Sbjct: 61 SIGAQEVSFPALLASDPYKETGRWVEYGDNLFRLKDRKGVDMLLGPTHEEMFTLMVKDLY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP YQIQ K+RDE RPR G++R REF+M DAYSFD+ EG +Y +Y+ Sbjct: 121 SSYKDLPLCLYQIQNKYRDEARPRAGILRGREFVMMDAYSFDVAQEGLDEAYQAQRDAYI 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RIF+RLG ++A SGP+GG S EF+ +A GE S + + D Sbjct: 181 RIFNRLGFDYAIVKAMSGPMGGSRSEEFLAVAANGEDTFVRSSGGYAANVEAVRMAVPDP 240 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + ++ P A D + + +SL Sbjct: 241 LPID------GLPEAEVVDTPDARTIESLVR 265 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 4/188 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 DV + D P+ + ARGIE+GHIF G KY+ + +GK V MG Sbjct: 395 GVIDVAEIREGDPAPDGSGELHLARGIEIGHIFQLGKKYADALGLKVLDHNGKLVTVTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R VAA+ E + D KG+ WP VAP+ + ++ ++ + +I + L++ Sbjct: 455 SYGLGVSRAVAAIAEGTCDEKGLCWPREVAPYDVQVLATGKGTEILDE-ATRIASELAEA 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD G +FA +++LG P V+VG + + D VE++ R TG +S+ E + Sbjct: 514 GLEVLLDDRKASPGVKFADSEILGMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAV 572 Query: 436 NYASHRFS 443 Sbjct: 573 CAVLKEVR 580 >gi|308234806|ref|ZP_07665543.1| threonyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018] gi|311114574|ref|YP_003985795.1| threonine--tRNA ligase [Gardnerella vaginalis ATCC 14019] gi|310946068|gb|ADP38772.1| threonine--tRNA ligase [Gardnerella vaginalis ATCC 14019] Length = 676 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 63/457 (13%), Positives = 134/457 (29%), Gaps = 49/457 (10%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD ++ L + + G+ + P G ++ + RE+ + Sbjct: 244 YTTRMEEAAKRDHRKLGQEMDLFS-FPDEIGPGLAVFHPKGAAIINAMEDYSREQHRKHH 302 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEV 113 + P + L+ SG Y M R P + + Sbjct: 303 YSFVQTPHITKGGLYETSGHLQWYKDGMYPPMKLDEERDENGNVTRQGADYYLKPMNCPM 362 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 363 HNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDSHIYCTREQMRDE 422 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 + L + GL + + E + S + + Sbjct: 423 L-KSLLNFVLGLLKDFGLNDFYLELST----------------KDEHKFVGSDEIWEEAT 465 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y + + D++ +VS ++ F Sbjct: 466 NTLAEVAKESGLELVDDPGGAAFYGPKI---SVQARDAIGRTWQVSTIQLD----FNLPE 518 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 ++ + ADG + G++ A++ + G W V + + Sbjct: 519 RF----KLEYIAADGSHQRPVMIHRALFGSIERFFAILLEHYAGAFPAWLAPVQVTGVPV 574 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 +K + L + D ++ G + A P +I G + V Sbjct: 575 A------DEFAPHLQKFISDLEENMVRCEMDSSDDRFGKKIRNASKSKVPFTLIAGEEDV 628 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 +++ V + R + +E+ + V Sbjct: 629 NNNAVSFRFRDGSQLNGVPVEQAKEWILSIIKQRVQV 665 >gi|255325106|ref|ZP_05366212.1| threonine--tRNA ligase [Corynebacterium tuberculostearicum SK141] gi|255297671|gb|EET76982.1| threonine--tRNA ligase [Corynebacterium tuberculostearicum SK141] Length = 687 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 59/448 (13%), Positives = 133/448 (29%), Gaps = 47/448 (10%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD +L L + + G + P G + R + G ++ Sbjct: 260 EEAEKRDHRRLGQELDLFS-FPDEIGSGFPVFHPNGATVRMEMENHSRNRHVQAGYSFVN 318 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRND------------KAMIYGPTHEEVMTDIF 118 P + DL+ +SG D Y M + + P + + IF Sbjct: 319 TPHITKGDLFKKSGHLDFYADGMFPPMQLDGEYDEEGNTVKEPQDYYAKPMNCPMHNLIF 378 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 S +SYR LP ++ +R E G+ R+R F DA+ + + + + Sbjct: 379 ASRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTEEQLEEELTK-V 437 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 + + GL + + + S + + + Sbjct: 438 LDFIISLLKDYGLSDFYLELST----------------KDPNKFVGSDEIWERSTSILQS 481 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + A Y + + D++ ++S ++ F ++ L Sbjct: 482 VAEKSGLELVPDPAGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FNLPERFELE 534 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 +A+ K + + G++ V+ + G W I + Sbjct: 535 YTAS---DGTKKRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVVGIPVA----- 586 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 E++ +L + G D +++ + P ++ G++ V V Sbjct: 587 -DEFSPHLEEVATQLRQKGIRADVDTSDDRMQKKIRNHTTGKVPFMLVAGARDVEADAVS 645 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 + + ++E + + + Sbjct: 646 FRFLDGTQVNGVPVKEAVELIAAWVAER 673 >gi|15644753|ref|NP_206923.1| threonyl-tRNA synthetase [Helicobacter pylori 26695] gi|2501057|sp|P56071|SYT_HELPY RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|2313207|gb|AAD07192.1| threonyl-tRNA synthetase (thrS) [Helicobacter pylori 26695] Length = 612 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 151/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ WLP G + + ++ + G Sbjct: 207 YLFQIEEAKKRDHRKLGVELGLFS-FDDEIGAGLPLWLPKGARLRKRIEDLLSQALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + L Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCS-----FEQIQSEVSAILDF 379 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + I + + T + + + + Sbjct: 380 --------------THKIMQAFDFSYEMELSTRPAKSIGDDKVWEKATNALKEALKEHRI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 DYKIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + Sbjct: 475 EYNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHHV 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + +A+ P+ +++G++ V + I+ R Sbjct: 529 FALKLKEALKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 589 QDQYKMPLKEFLNMVESKMQE 609 >gi|34557905|ref|NP_907720.1| prolyl-tRNA synthetase [Wolinella succinogenes DSM 1740] gi|81832821|sp|Q7M8L1|SYP_WOLSU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|34483623|emb|CAE10620.1| PROLYL-TRNA SYNTHETASE [Wolinella succinogenes] Length = 570 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 103/235 (43%), Positives = 150/235 (63%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S +F P L+E P+DA + SH+ ++R G I Q GIY++LPLG++ +D + +++EE Sbjct: 1 MRFSAFFAPTLKEAPKDATLKSHEYLIRGGYIQQVGSGIYNFLPLGKRVMDKIRQVVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+ + + A+LW SGR++ YGKE+LR DR + + GPTHEE++ ++ + Sbjct: 61 MDQAGAQEVMLGFVTPAELWRNSGRFEKYGKELLRFKDRKENDFVLGPTHEEMVVELAKG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ LP YQI LKFRDE+RPRFG+MR REF+MKD YSF + M + Sbjct: 121 YVKSYKQLPLHLYQIHLKFRDEIRPRFGLMRGREFVMKDGYSFHANEADLIREFELMEAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL + A+SG IGG S EF+VLA +GE + ++ E Sbjct: 181 YKRIFTRLGLDFRVVEADSGAIGGSGSKEFMVLAQSGEDTIAVCDSC-EYAANIE 234 Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 68/183 (37%), Positives = 97/183 (53%), Gaps = 3/183 (1%) Query: 261 DVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ D P E + +GIEVGHIF GT+YS P+ A F +GK + MG YG Sbjct: 389 DLAEVGEGDGCPLCEGRLTYKKGIEVGHIFQLGTRYSEPLGANFLNPEGKSQPLVMGCYG 448 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R++AAVIE HD KG IW S APF + ++ D + E +Y L K G + Sbjct: 449 IGVSRLLAAVIEQHHDEKGCIWTKSTAPFNLVIVVSNVKDPSQKAYAENLYNALQKEGIE 508 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ GS+ A +LLG P VIVG K + + +VE+ +R + + ++++ Sbjct: 509 VLLDDRDERYGSKMADFELLGIPYAVIVG-KGLIEGQVELVNRANLQKGIVLADDILGRI 567 Query: 439 SHR 441 Sbjct: 568 LEL 570 >gi|212696507|ref|ZP_03304635.1| hypothetical protein ANHYDRO_01045 [Anaerococcus hydrogenalis DSM 7454] gi|212676492|gb|EEB36099.1| hypothetical protein ANHYDRO_01045 [Anaerococcus hydrogenalis DSM 7454] Length = 390 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 69/423 (16%), Positives = 131/423 (30%), Gaps = 41/423 (9%) Query: 25 LMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESG 84 + L + H+ + G + G + + G E+ P + + +LW SG Sbjct: 1 MNLFS--FHEEAPGFPFFKENGMILRHELLNWWTDVLAENGYGEIQTPLIMNEELWHRSG 58 Query: 85 RYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELR 144 +D Y + M + + P + ++ SYR+LP + R EL Sbjct: 59 HWDHYKENM-YFTKIDGENYAVKPMNCPGSVLVYGEEPHSYRDLPIRLAEYGQVHRHELS 117 Query: 145 PR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG 203 G+ R R F DA+ + L + + ++ G K + P Sbjct: 118 GALHGLFRVRTFTQDDAHVYCLPSQVKDEVFKM-IDLADLLYSTFGFKYKI-ELSTRPDD 175 Query: 204 GDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVH 263 E DF + + I + A Y D H Sbjct: 176 FMGKIE-----------------EWDFAEKALEDALKERGIDYQINPKDGAFYGPKIDFH 218 Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV-QMGSYGIGAM 322 E + R + G I + T+ +G+ + +G++ Sbjct: 219 LEDA----------AKRTWQCGTI-QLDFQLPQNFDLTYIDENGEKKRPVMLHRALLGSV 267 Query: 323 RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD 382 + G+ +W + I D + + ++ K G V D Sbjct: 268 ERFIGSVTEQFAGRFPLW------INPKQVAIIPVSDKFADFADDLAEKIKKAGYRVDVD 321 Query: 383 DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 E +G + A L+ ++VG K+ +++R +D+S EE I + Sbjct: 322 HRSEGVGYKIRQAQLMRTNYMLVVGENEEKSGKLTVRNRDGEETKDVSFEEFIEKLNQER 381 Query: 443 SNN 445 + Sbjct: 382 DSK 384 >gi|218562195|ref|YP_002343974.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|81858473|sp|Q9PHX1|SYP_CAMJE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|112359901|emb|CAL34689.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 569 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 112/271 (41%), Positives = 159/271 (58%), Gaps = 4/271 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 2 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 62 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 122 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ E Sbjct: 182 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICENC-DYAANVEAA--- 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 E+ A YA+ N K DSL Sbjct: 238 KRAKKTCQDERPEANYASKFHTPNIKTIDSL 268 Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 64/223 (28%), Positives = 110/223 (49%), Gaps = 6/223 (2%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS---DVHNEKLFDSLPEN--KRVSA 279 ++DF + +E + + D+ K D + K + Sbjct: 347 DFYIDFELENEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLIEVKEGDCCVKCGAKLKQS 406 Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE++HD KG I Sbjct: 407 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEANHDEKGCI 466 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W ++APF + +I D+ + K+Y L+ +G +V DD E+ G + +L+G Sbjct: 467 WNKTLAPFVLEIIVSNLKDEKALEFANKLYRDLTNLGLEVLLDDRNERFGVKMNDFELMG 526 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 FP +++G K + ++++E+ R ++E + +E++ + Sbjct: 527 FPYALVIG-KGLENNEIELIQREGLVKELIKTDELMEILKKKV 568 >gi|298346548|ref|YP_003719235.1| proline--tRNA ligase [Mobiluncus curtisii ATCC 43063] gi|298236609|gb|ADI67741.1| proline--tRNA ligase [Mobiluncus curtisii ATCC 43063] Length = 623 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 104/277 (37%), Positives = 153/277 (55%), Gaps = 2/277 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + S +F+ L+E+P +AE+ SHKL++R G I + + GIY+WLPLG K L V I+REE Sbjct: 4 KMSSFFVRTLREDPVEAEVDSHKLLVRAGYIRRAAPGIYTWLPLGLKTLRRVENIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 +R G E+ P L S++ +V + R++ +G + +L DR + + PTHEE+ T + Sbjct: 64 DRIGGQELQFPMLLSSEPYVATNRWEEFGPSLFKLKDRKEGDYLLAPTHEEMFTLAVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQ++ K+RDE RPR G++R REF+MKD+YSFDLT +G +HSY +Y Sbjct: 124 YTSYKDLPVILYQMKEKYRDEARPRAGIIRGREFVMKDSYSFDLTDDGLEHSYALHRGAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 R+F RLGL + A SGP+GG S EF+ GE S + T + Sbjct: 184 RRVFTRLGLDFVICHAMSGPMGGSASEEFLFPCAIGEDTFVKSPGGYAANAEAVTTIAPE 243 Query: 242 IISLN--SIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 + E P A T + + P R Sbjct: 244 PLPYEDAPAAEVRPTPDATTIEALVNQANKLYPRPDR 280 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 63/190 (33%), Positives = 97/190 (51%), Gaps = 5/190 (2%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 AT + D P+ RGIE+GHIF G KY+ + + +GK V MG Sbjct: 410 ATIEAAEVMEGDPAPDGSGSLTLERGIEIGHIFALGRKYAKALGLSVLDENGKSQVVTMG 469 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VAA+ E +HD +G++WP ++APF++ ++ D EK+ +L Sbjct: 470 SYGIGVSRLVAAIAEENHDDRGLMWPLNIAPFQVHVLATG-KDPEIFATAEKLACQLDAA 528 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G V +DD G +F A+LLG P ++VG K +++ KVEI+ R G ++ + E Sbjct: 529 GLQVLYDDRPKASAGVKFKDAELLGMPYALVVG-KGLAEGKVEIRQRREGTTQETTPESC 587 Query: 435 INYASHRFSN 444 + Sbjct: 588 VEELLQAIEK 597 >gi|156354210|ref|XP_001623293.1| predicted protein [Nematostella vectensis] gi|156209976|gb|EDO31193.1| predicted protein [Nematostella vectensis] Length = 559 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 75/437 (17%), Positives = 148/437 (33%), Gaps = 39/437 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD L H+ S G +LP G + + I+E+ + G E+ Sbjct: 152 EEAAKRDHRKIGRDQELF--FFHELSPGSCFFLPKGAVIYNTLINFIKEQYWKRGFQEVV 209 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + S LW SG + Y + M + ++ P + +F +S+R LP Sbjct: 210 SPNIYSTKLWETSGHWQHYSEHMFSF-EVEKESYALKPMNCPGHCLMFDHRPRSWRELPL 268 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + + + ++ G Sbjct: 269 RMADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTADQIGQEIISC-LDFLKHVYGVFG 327 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + P E A+ + + Sbjct: 328 FTFKLN-LSTRPEKYLGKIELWNQAEK-----------------ELEAALNGFGQAWVLN 369 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ ++ D+L + + ++ F +++L + Sbjct: 370 PGDGAFYGPKIDI---QIQDALRRYHQCATIQLD----FQLPERFNLTYVTGEGDE--RK 420 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + +G++ + A++ + G WP ++P + +I I + +K+ Sbjct: 421 RPVIVHRAILGSVERMIAILT---ESFGGKWPFWLSPRQAIVIPIGPK---YDEYAQKVM 474 Query: 370 ARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 + + G V D D G + + A L + +VG K + V ++ R + + Sbjct: 475 SDILAAGYHVDADLDHGTTLNKKVRNAQLAQYNFIFVVGEKEATTGTVNVRTRDNKVHGE 534 Query: 429 MSLEEVINYASHRFSNN 445 S+E V+N + S Sbjct: 535 FSVEAVLNKFATLTSER 551 >gi|315657037|ref|ZP_07909922.1| proline--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492429|gb|EFU82035.1| proline--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 623 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 98/240 (40%), Positives = 144/240 (60%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + S +F+ L+E+P +AE+ SHKL++R G I + + GIY+WLPLG K L V I+REE Sbjct: 4 KMSSFFVRTLREDPVEAEVDSHKLLVRAGYIRRAAPGIYTWLPLGLKTLRRVENIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 +R G E+ P L S++ +V + R++ +G + +L DR + + PTHEE+ T + Sbjct: 64 DRIGGQELQFPMLLSSEPYVATNRWEEFGPSLFKLKDRKEGDYLLAPTHEEMFTLAVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQ++ K+RDE RPR G++R REF+MKD+YSFDLT +G +HSY +Y Sbjct: 124 YTSYKDLPVILYQMKEKYRDEARPRAGIIRGREFVMKDSYSFDLTDDGLEHSYALHRGAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 R+F RLGL + A SGP+GG S EF+ GE S + T + Sbjct: 184 RRVFTRLGLDFVICHAMSGPMGGSASEEFLFPCAIGEDTFVKSPGGYAANAEAVTTIAPE 243 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 63/190 (33%), Positives = 97/190 (51%), Gaps = 5/190 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 AT + D P+ RGIE+GHIF G KY+ + + +GK V MG Sbjct: 410 ATIEAAEVMEGDPAPDGSGPLTLERGIEIGHIFALGRKYAKALGLSVLDENGKSQVVTMG 469 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VAA+ E +HD +G++WP ++APF++ ++ D EK+ +L Sbjct: 470 SYGIGVSRLVAAIAEENHDDRGLMWPLNIAPFQVHVLATG-KDPEIFATAEKLACQLDAA 528 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G V +DD G +F A+LLG P ++VG K +++ KVEI+ R G ++ + E Sbjct: 529 GLQVLYDDRPKASAGVKFKDAELLGMPYALVVG-KGLAEGKVEIRQRREGTTQETTPESC 587 Query: 435 INYASHRFSN 444 + Sbjct: 588 VEELLQAIEK 597 >gi|315655105|ref|ZP_07908007.1| proline--tRNA ligase [Mobiluncus curtisii ATCC 51333] gi|315490586|gb|EFU80209.1| proline--tRNA ligase [Mobiluncus curtisii ATCC 51333] Length = 623 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 98/240 (40%), Positives = 144/240 (60%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + S +F+ L+E+P +AE+ SHKL++R G I + + GIY+WLPLG K L V I+REE Sbjct: 4 KMSSFFVRTLREDPVEAEVDSHKLLVRAGYIRRAAPGIYTWLPLGLKTLRRVENIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 +R G E+ P L S++ +V + R++ +G + +L DR + + PTHEE+ T + Sbjct: 64 DRIGGQELQFPMLLSSEPYVATNRWEEFGPSLFKLKDRKEGDYLLAPTHEEMFTLAVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQ++ K+RDE RPR G++R REF+MKD+YSFDLT +G +HSY +Y Sbjct: 124 YTSYKDLPVILYQMKEKYRDEARPRAGIIRGREFVMKDSYSFDLTDDGLEHSYALHRGAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 R+F RLGL + A SGP+GG S EF+ GE S + T + Sbjct: 184 RRVFTRLGLDFVICHAMSGPMGGSASEEFLFPCAIGEDTFVKSPGGYAANAEAVTTIAPE 243 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 5/190 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 AT + D P+ RGIE+GHIF G KY+ + + +GK V MG Sbjct: 410 ATIEAAEIMEGDPAPDGSGPLTMERGIEIGHIFALGRKYAKALGLSVLDENGKSQVVTMG 469 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VAA+ E +HD KG+IWP ++APF++ ++ D EK+ +L Sbjct: 470 SYGIGVSRLVAAIAEENHDDKGLIWPLNIAPFQVHVLATG-KDPEIFATAEKLACQLDAA 528 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G V +DD G +F A+LLG P ++VG K +++ K+EI+ R G ++ + E Sbjct: 529 GLQVLYDDRPKASAGVKFKDAELLGMPYALVVG-KGLAEGKIEIRQRREGTTQETTPESC 587 Query: 435 INYASHRFSN 444 + N Sbjct: 588 VEELLQAIEN 597 >gi|304389734|ref|ZP_07371693.1| proline--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326910|gb|EFL94149.1| proline--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 623 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 98/240 (40%), Positives = 144/240 (60%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + S +F+ L+E+P +AE+ SHKL++R G I + + GIY+WLPLG K L V I+REE Sbjct: 4 KMSSFFVRTLREDPVEAEVDSHKLLVRAGYIRRAAPGIYTWLPLGLKTLRRVENIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 +R G E+ P L S++ +V + R++ +G + +L DR + + PTHEE+ T + Sbjct: 64 DRIGGQELQFPMLLSSEPYVATNRWEEFGPSLFKLKDRKEGDYLLAPTHEEMFTLAVKDM 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQ++ K+RDE RPR G++R REF+MKD+YSFDLT +G +HSY +Y Sbjct: 124 YTSYKDLPVILYQMKEKYRDEARPRAGIIRGREFVMKDSYSFDLTDDGLEHSYALHRGAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 R+F RLGL + A SGP+GG S EF+ GE S + T + Sbjct: 184 RRVFTRLGLDFVICHAMSGPMGGSASEEFLFPCAIGEDTFVKSPGGYAANAEAVTTIAPE 243 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 63/190 (33%), Positives = 97/190 (51%), Gaps = 5/190 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 AT + D P+ RGIE+GHIF G KY+ + + +GK V MG Sbjct: 410 ATIEAAEVMEGDPAPDGSGPLTLERGIEIGHIFALGRKYAKALGLSVLDENGKSQVVTMG 469 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+VAA+ E +HD +G++WP ++APF++ ++ D EK+ +L Sbjct: 470 SYGIGVSRLVAAIAEENHDDRGLMWPLNIAPFQVHVLATG-KDPEIFATAEKLACQLDAA 528 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G V +DD G +F A+LLG P ++VG K +++ KVEI+ R G ++ + E Sbjct: 529 GLQVLYDDRPKASAGVKFKDAELLGMPYALVVG-KGLAEGKVEIRQRREGTTQETTPESC 587 Query: 435 INYASHRFSN 444 + Sbjct: 588 VEELLQAIEK 597 >gi|153952152|ref|YP_001398429.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97] gi|166980114|sp|A7H4J9|SYP_CAMJD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|152939598|gb|ABS44339.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97] Length = 569 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 112/271 (41%), Positives = 159/271 (58%), Gaps = 4/271 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 2 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 62 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 122 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ E Sbjct: 182 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICENC-DYAANIEAA--- 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 E+ A YA+ N K DSL Sbjct: 238 KRAKKTCQDERPEANYASKFHTPNIKTIDSL 268 Score = 156 bits (393), Expect = 9e-36, Method: Composition-based stats. Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 6/223 (2%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS---DVHNEKLFDSLPEN--KRVSA 279 ++DF + +E + + D+ K D + K + Sbjct: 347 DFYIDFELENEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLIEVKEGDCCVKCGAKLKQS 406 Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE+SHD KG I Sbjct: 407 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEASHDEKGCI 466 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W ++APF + +I D+ + K+Y L+++G +V DD E+ G + +L+G Sbjct: 467 WNKTLAPFVLEIIVSNIKDEKTLEFANKLYEDLTELGLEVLLDDRNERFGVKMNDFELMG 526 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 FP +++G K + ++++E R ++E + +E+ + Sbjct: 527 FPYALVIG-KGLENNEIEFIQREGLVKELIKTDELTEILKKKV 568 >gi|145295791|ref|YP_001138612.1| threonyl-tRNA synthetase [Corynebacterium glutamicum R] gi|140845711|dbj|BAF54710.1| hypothetical protein [Corynebacterium glutamicum R] Length = 686 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 65/454 (14%), Positives = 133/454 (29%), Gaps = 50/454 (11%) Query: 7 FLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + +L + RD +L L + G+ + P G + + R G Sbjct: 254 YQTMLAEAEKRDHRRLGTELDLFS-FPDDLGSGLPVFHPNGGIVRNEMEDHSRRRHIAAG 312 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEV 113 ++ P + DL+ SG Y M + + P + + Sbjct: 313 YSFVNTPHITKQDLFERSGHLGFYKDGMFPPMQVDAEFDEDGNVTKPGQEYYLKPMNCPM 372 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IF S +SYR LP ++ +R E G+ R+R F DA+ + T + + Sbjct: 373 HNLIFDSRGRSYRELPLRLFEFGNVYRYEKSGVIHGLTRARGFTQDDAHIYC-TEDQLEA 431 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 + L + GL + + S + + Sbjct: 432 ELTSVLDFILSLLRDYGLDDFYLELSTRDPKKS----------------VGSDEIWERST 475 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 N + + A Y + + D++ ++S ++ Sbjct: 476 EILNRVATNSGLELVPDPEGAAFYGPKI---SVQARDAIGRTWQMSTVQLDFNMP----- 527 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + + +DG + G++ V+ + G W I + Sbjct: 528 ---ERFNLEYTSSDGSKQQPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVMGIPV 584 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 C E I A+L + G D +++ + P ++ G++ V Sbjct: 585 A------DDCIPHLETITAQLREKGIRADVDTSDDRMQKKIRNHTTGKVPFMLLAGARDV 638 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 + V + + ++E I S + Sbjct: 639 EANAVSFRFLDGTQVNGVPVDEAIAVISSWIGDR 672 >gi|73919785|sp|Q8NPZ0|SYT_CORGL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS Length = 695 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 65/454 (14%), Positives = 133/454 (29%), Gaps = 50/454 (11%) Query: 7 FLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + +L + RD +L L + G+ + P G + + R G Sbjct: 263 YQTMLAEAEKRDHRRLGTELDLFS-FPDDLGSGLPVFHPNGGIVRNEMEDHSRRRHIAAG 321 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEV 113 ++ P + DL+ SG Y M + + P + + Sbjct: 322 YSFVNTPHITKQDLFERSGHLGFYKDGMFPPMQVDAEFDEDGNVTKPGQEYYLKPMNCPM 381 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IF S +SYR LP ++ +R E G+ R+R F DA+ + T + + Sbjct: 382 HNLIFDSRGRSYRELPLRLFEFGNVYRYEKSGVIHGLTRARGFTQDDAHIYC-TEDQLEA 440 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 + L + GL + + S + + Sbjct: 441 ELTSVLDFILSLLRDYGLDDFYLELSTRDPKKS----------------VGSDEIWERST 484 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 N + + A Y + + D++ ++S ++ Sbjct: 485 EILNRVATNSGLELVPDPEGAAFYGPKI---SVQARDAIGRTWQMSTVQLDFNMP----- 536 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + + +DG + G++ V+ + G W I + Sbjct: 537 ---ERFNLEYTSSDGSKQQPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVMGIPV 593 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 C E I A+L + G D +++ + P ++ G++ V Sbjct: 594 A------DDCIPHLETITAQLREKGIRADVDTSDDRMQKKIRNHTTGKVPFMLLAGARDV 647 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 + V + + ++E I S + Sbjct: 648 EANAVSFRFLDGTQVNGVPVDEAIAVISSWIGDR 681 >gi|62390552|ref|YP_225954.1| threonyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032] gi|41325890|emb|CAF20053.1| THREONYL-TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032] Length = 700 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 65/454 (14%), Positives = 133/454 (29%), Gaps = 50/454 (11%) Query: 7 FLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + +L + RD +L L + G+ + P G + + R G Sbjct: 268 YQTMLAEAEKRDHRRLGTELDLFS-FPDDLGSGLPVFHPNGGIVRNEMEDHSRRRHIAAG 326 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEV 113 ++ P + DL+ SG Y M + + P + + Sbjct: 327 YSFVNTPHITKQDLFERSGHLGFYKDGMFPPMQVDAEFDEDGNVTKPGQEYYLKPMNCPM 386 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IF S +SYR LP ++ +R E G+ R+R F DA+ + T + + Sbjct: 387 HNLIFDSRGRSYRELPLRLFEFGNVYRYEKSGVIHGLTRARGFTQDDAHIYC-TEDQLEA 445 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 + L + GL + + S + + Sbjct: 446 ELTSVLDFILSLLRDYGLDDFYLELSTRDPKKS----------------VGSDEIWERST 489 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 N + + A Y + + D++ ++S ++ Sbjct: 490 EILNRVATNSGLELVPDPEGAAFYGPKI---SVQARDAIGRTWQMSTVQLDFNMP----- 541 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + + +DG + G++ V+ + G W I + Sbjct: 542 ---ERFNLEYTSSDGSKQQPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVMGIPV 598 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 C E I A+L + G D +++ + P ++ G++ V Sbjct: 599 A------DDCIPHLETITAQLREKGIRADVDTSDDRMQKKIRNHTTGKVPFMLLAGARDV 652 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 + V + + ++E I S + Sbjct: 653 EANAVSFRFLDGTQVNGVPVDEAIAVISSWIGDR 686 >gi|19552881|ref|NP_600883.1| threonyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032] gi|21324440|dbj|BAB99064.1| Threonyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032] Length = 686 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 65/454 (14%), Positives = 133/454 (29%), Gaps = 50/454 (11%) Query: 7 FLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + +L + RD +L L + G+ + P G + + R G Sbjct: 254 YQTMLAEAEKRDHRRLGTELDLFS-FPDDLGSGLPVFHPNGGIVRNEMEDHSRRRHIAAG 312 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEV 113 ++ P + DL+ SG Y M + + P + + Sbjct: 313 YSFVNTPHITKQDLFERSGHLGFYKDGMFPPMQVDAEFDEDGNVTKPGQEYYLKPMNCPM 372 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IF S +SYR LP ++ +R E G+ R+R F DA+ + T + + Sbjct: 373 HNLIFDSRGRSYRELPLRLFEFGNVYRYEKSGVIHGLTRARGFTQDDAHIYC-TEDQLEA 431 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 + L + GL + + S + + Sbjct: 432 ELTSVLDFILSLLRDYGLDDFYLELSTRDPKKS----------------VGSDEIWERST 475 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 N + + A Y + + D++ ++S ++ Sbjct: 476 EILNRVATNSGLELVPDPEGAAFYGPKI---SVQARDAIGRTWQMSTVQLDFNMP----- 527 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + + +DG + G++ V+ + G W I + Sbjct: 528 ---ERFNLEYTSSDGSKQQPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVMGIPV 584 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 C E I A+L + G D +++ + P ++ G++ V Sbjct: 585 A------DDCIPHLETITAQLREKGIRADVDTSDDRMQKKIRNHTTGKVPFMLLAGARDV 638 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 + V + + ++E I S + Sbjct: 639 EANAVSFRFLDGTQVNGVPVDEAIAVISSWIGDR 672 >gi|86149024|ref|ZP_01067256.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6] gi|85840382|gb|EAQ57639.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6] Length = 569 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 112/271 (41%), Positives = 159/271 (58%), Gaps = 4/271 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 2 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 62 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 122 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ E Sbjct: 182 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICENC-DYAANVEAA--- 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 E+ A YA+ N K DSL Sbjct: 238 KRAKKTCQDERPEANYASKFHTPNIKTIDSL 268 Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 64/223 (28%), Positives = 110/223 (49%), Gaps = 6/223 (2%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS---DVHNEKLFDSLPEN--KRVSA 279 ++DF + +E + + D+ K D + K + Sbjct: 347 DFYIDFELENEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLIEVKEGDCCVKCGAKLKQS 406 Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE++HD KG I Sbjct: 407 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEANHDEKGCI 466 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W ++APF + +I D+ + K+Y L+ +G +V DD E+ G + +L+G Sbjct: 467 WNKTLAPFVLEIIVSNLKDEKALEFANKLYRDLTNLGLEVLLDDRNERFGVKMNDFELMG 526 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 FP +++G K + ++++E+ R ++E + +E++ + Sbjct: 527 FPYALVIG-KGLENNEIELIQREGLVKELIKTDELMEILKKKV 568 >gi|57238257|ref|YP_178662.1| prolyl-tRNA synthetase [Campylobacter jejuni RM1221] gi|81819550|sp|Q5HVM3|SYP_CAMJR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|57167061|gb|AAW35840.1| prolyl-tRNA synthetase [Campylobacter jejuni RM1221] Length = 569 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 112/271 (41%), Positives = 159/271 (58%), Gaps = 4/271 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 2 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 62 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 122 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ E Sbjct: 182 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICENC-DYAANVEAA--- 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 E+ A YA+ N K DSL Sbjct: 238 KRAKKTCQDERPEANYASKFHTPNIKTIDSL 268 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 6/223 (2%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS---DVHNEKLFDSLPEN--KRVSA 279 ++DF + +E + + D+ K D + K + Sbjct: 347 DFYIDFELENEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLIEVKEGDCCVKCGAKLKQS 406 Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF G KYS M+A F +GK MG YGIG R++A E+SHD KG I Sbjct: 407 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVATEASHDEKGCI 466 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W ++APF + +I D+ + K+Y L+ +G +V DD E+ G + +L+G Sbjct: 467 WNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMNDFELMG 526 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 FP ++VG K + +++E+ R I+E + +E++ + Sbjct: 527 FPYALVVG-KGLEKNEIELIQREGLIKELIKTDELMEILKKKV 568 >gi|154508918|ref|ZP_02044560.1| hypothetical protein ACTODO_01429 [Actinomyces odontolyticus ATCC 17982] gi|153798552|gb|EDN80972.1| hypothetical protein ACTODO_01429 [Actinomyces odontolyticus ATCC 17982] Length = 677 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 70/450 (15%), Positives = 144/450 (32%), Gaps = 42/450 (9%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 I + RD +L L + + G+ + P G + + + + G Sbjct: 245 RIKEAERRDHRRLGAELDLYS-FPEEIGPGLVVFHPKGGILRHEIESYVTDRHKAAGFDF 303 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHEEVMTD 116 + P + L+ SG Y M + + + + Sbjct: 304 VHTPEISKGGLFHTSGHLPYYADTMFPPMLVDEERDEDGNVTKAGQEYYLKAMNCPMHNL 363 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IFRS +SYR LP FY++ +R E G+ R R F D++++ + S+ Sbjct: 364 IFRSRGRSYRELPLRFYELGHDYRYEKSGVVHGLTRMRGFTQDDSHTYCTPEQASEE-IR 422 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 +L I GLK + + G +FI + + Sbjct: 423 TQIEFFLSILSAFGLKDFYLELSTRDEDGKKKDKFIGSDED-----------WAAATKAL 471 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 A Y + ++ D++ ++S + F ++ Sbjct: 472 EDACAATGLDLVPDPGGAAFYGPKV---SVQVKDAIGRTWQMSTIQYD----FNQPDRFD 524 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 L +A + V + S +G++ V+ + +P ++P ++ LI + Sbjct: 525 LEYTAA---DGSRQRPVMIHSAKLGSVERFIGVLT---EHYAGAFPAWLSPVQVRLIPVA 578 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + + + A+L + G V D ++ G + A P +I G + V Sbjct: 579 ---EAFDGYVKDVAAKLRERGVRVETDLSDDRFGKKIRNASKDKIPFTLIAGGEDVEAGA 635 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + R ++++ + Sbjct: 636 VSFRLRDGSQHNGVAVDRAVELIVSHIEQR 665 >gi|288818560|ref|YP_003432908.1| prolyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] gi|288787960|dbj|BAI69707.1| prolyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] gi|308752150|gb|ADO45633.1| prolyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] Length = 569 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 112/253 (44%), Positives = 154/253 (60%), Gaps = 1/253 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S YF +E P DAE SHK +L+ G I Q + GIY++ P G + L + I+R+E Sbjct: 1 MRWSTYFWYTSKEEPADAEAPSHKYLLKGGFIKQVASGIYAFTPAGYRVLKKIENIVRKE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R+GA E+ + L A+LW E+GR+D YG+E+ L DR+ + GPTHEE +TD+ R+ Sbjct: 61 MDRSGAQELLLTVLNPAELWRETGRWDLYGRELFTLKDRHGRDYCLGPTHEEEITDMVRT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LPF YQIQ+KFRDE RPRFG++R REF+MKDAYSFD + SY M + Sbjct: 121 FVNSYRQLPFILYQIQVKFRDEKRPRFGLIRGREFIMKDAYSFDTDEFSALMSYETMKFA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF +L LK++ + A G IGG SHEF++L D GE +V + + +E + Sbjct: 181 YERIFKKLRLKTLMVEASVGAIGGMSSHEFVILTDYGEARVAYCESC-GYSANAEIVKLN 239 Query: 241 DIISLNSIVEQWT 253 Q T Sbjct: 240 KGKEEEEEERQLT 252 Score = 164 bits (414), Expect = 4e-38, Method: Composition-based stats. Identities = 71/194 (36%), Positives = 108/194 (55%), Gaps = 3/194 (1%) Query: 256 YAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 Y DV D P+ ++G+E+GHIF GT+YSLPM A +K G+D + Sbjct: 377 YGEFFDVAQVVEKDPCPKCGAPLKVSKGLELGHIFLLGTRYSLPMKAFYKDQQGEDKPIY 436 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MG YGIG R ++A++E D GI WP VAPF++++I + D + EKIY + Sbjct: 437 MGCYGIGISRCMSAIVEQYSDELGIKWPTVVAPFELNVICLNPSDAEQKTVAEKIYYQAQ 496 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 ++G DV +DD G +FA ADL GFP +++VG K + KVE++ R TG + D+ +E+ Sbjct: 497 EMGLDVIYDDREASAGFKFADADLCGFPYRIVVGKKT-KEGKVELQKRHTGEKLDVPIED 555 Query: 434 VINYASHRFSNNRP 447 + ++ Sbjct: 556 AVRIVKEFVDKDKE 569 >gi|194477315|ref|YP_002049494.1| Threonyl-tRNA synthetase, class IIa [Paulinella chromatophora] gi|171192322|gb|ACB43284.1| Threonyl-tRNA synthetase, class IIa [Paulinella chromatophora] Length = 599 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 140/445 (31%), Gaps = 43/445 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + +E RD L L + + + G+ W P G + + R+ G Sbjct: 188 YKRRKKEALRRDHRRLGTDLDLFS-IEDEAGSGLVFWHPNGARIRLLIEDFWRQSHLEAG 246 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + LW SG D Y + M +++ P + + S ++SY Sbjct: 247 YELLYTPHIADIRLWKTSGHLDFYSESMFSPMQVDEREYQLKPMNCPFHVLTYASKLRSY 306 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + ++ +R E G+MR R F DA+ F L + L + Sbjct: 307 RELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHIFCLPEQIGSEVLE-----VLNL 361 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 R+ + + + T + D D + Sbjct: 362 TERILSAFDFTK-------------YEINLSTRPEKFIGGDDVWDLATNGLVEALNAKNW 408 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D++ + S ++ F ++ + + G Sbjct: 409 NYKIDEGGGAFYGPKIDL---KIKDAIGRTWQCSTIQLD----FNLPERF----NIEYVG 457 Query: 305 ADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 +DG M I R +IES Sbjct: 458 SDGSRQRPIMIHRAIFGSLERFFGVMIESCAGDFPFWLAPEQIRLLPVT-------DEVI 510 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 E++ ++L G D G+++G + P+ +VG+K ++ R Sbjct: 511 TYAEELLSQLKIAGVRASIDRTGDRLGKLIRNGEQKKIPILAVVGAKEAEVGGASLRSRY 570 Query: 423 TGIREDMSLEEVINYASHRFSNNRP 447 G ++ ++ A+ +N + Sbjct: 571 EGELGLVNAYNLVQTAT--LANCKQ 593 >gi|331701343|ref|YP_004398302.1| Prolyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929] gi|329128686|gb|AEB73239.1| Prolyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929] Length = 569 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 108/251 (43%), Positives = 153/251 (60%), Gaps = 1/251 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P L+E P+ AE SH++++R G I Q S G+Y++LPL + L+ + IIR+E Sbjct: 1 MKQSQMLIPTLKETPKGAEALSHQMLVRGGYIRQISAGMYAYLPLAYRVLNKIETIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +T A EM +P + ADLW ESGRYD+YG E+ + +R++ I GPTHEE T + R Sbjct: 61 MEKTSAHEMLMPDILPADLWKESGRYDTYGPELFKFKNRHETDFILGPTHEETFTALIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPR+G++RSREF+MKDAYSF E +YN M + Sbjct: 121 SIKSYKQLPLVLYQIQNKYRDENRPRYGLLRSREFIMKDAYSFATNDEDLDKTYNAMEQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP-IPSENTDF 239 Y IF R+GLK + + G +GG S EF +A GE + S + F + + Sbjct: 181 YRNIFDRIGLKYKVIIGDGGAMGGSDSKEFSAMAAVGEDTIVYSDESDYFANLEMAKSKV 240 Query: 240 DDIISLNSIVE 250 DD S + Sbjct: 241 DDQPSTEPEAD 251 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 65/173 (37%), Positives = 97/173 (56%), Gaps = 1/173 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 + RGIE+GHIF GT+YS + A +G+ V MGSYGIG R+++A+ E Sbjct: 396 GKGTLKFTRGIEIGHIFKLGTRYSKSLKANVLDENGRAVPVIMGSYGIGVSRLLSAISEQ 455 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 + D G++WP +VAPF + +I I A V D +I A+L+ V DD E+ G + Sbjct: 456 NADENGLVWPKAVAPFDVHVIPINAKKAVQMDLAHQIEAQLTADQLQVLVDDRKERAGVK 515 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 FA +DL+G PL+V +G K + VEIK R TG ++++ E+ + N Sbjct: 516 FADSDLMGIPLRVTIGKK-AEEGIVEIKIRKTGETVEVNVTELSDTIKKMLKN 567 >gi|302537254|ref|ZP_07289596.1| prolyl-tRNA synthetase [Streptomyces sp. C] gi|302446149|gb|EFL17965.1| prolyl-tRNA synthetase [Streptomyces sp. C] Length = 570 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 105/238 (44%), Positives = 144/238 (60%), Gaps = 1/238 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ L+E+P DAE SH+L++R G + + S G+++WLPLG+K LDNV+ I+REE Sbjct: 13 RMSRLMAKTLREDPADAETLSHRLLVRAGYVRRSSAGVWTWLPLGKKVLDNVSRIVREEM 72 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + SGR+ YG + RL DR + GPTHEE+ T + + Sbjct: 73 DAIGAQEVLLPALLPKEPYEVSGRWSEYGDLLFRLKDRKGADYLLGPTHEEIFTLVVKDQ 132 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR GV+R REF MKD+YSFD++ EG SY +Y Sbjct: 133 CTSYKDLPVMLYQIQTKYRDEARPRSGVLRGREFQMKDSYSFDVSDEGLAESYRLHREAY 192 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 +RIF RLGL + A SG +GG S EF+ A GE F D+ +E F Sbjct: 193 VRIFERLGLDHRIVSAVSGAMGGSASEEFLAPAGAGE-DTFADCPSCDYAANTEAVTF 249 Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 56/181 (30%), Positives = 80/181 (44%), Gaps = 6/181 (3%) Query: 261 DVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 DV + D P R IE+GHIF G KY+ G +GK V MGSYG Sbjct: 392 DVVVVEPGDPCPACGAGLKLDRAIEIGHIFQLGRKYADAFGLDVLGKEGKPVRVTMGSYG 451 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R VAA+ E + D +G+ WP +VAP + ++ + G Sbjct: 452 IGVSRAVAALAEQTADERGLRWPAAVAPADVHVVAAGKAVPLALAEEAAAALA--AAGRR 509 Query: 379 VFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 V DD G G + A+L+G P ++ G + VE++ R G RE++ L E + Sbjct: 510 VLLDDRPGLSPGVKLTDAELIGVPWILVAGRRSAE-GVVELQDRAAGTREELPLTEALAR 568 Query: 438 A 438 Sbjct: 569 L 569 >gi|205355399|ref|ZP_03222170.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421] gi|205346633|gb|EDZ33265.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421] Length = 569 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 112/271 (41%), Positives = 159/271 (58%), Gaps = 4/271 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 2 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 62 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 122 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ E Sbjct: 182 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICENC-DYAANVEAA--- 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 E+ A YA+ N K DSL Sbjct: 238 KRAKKTCQDERPEANYASKFHTPNIKTIDSL 268 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 6/223 (2%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS---DVHNEKLFDSLPEN--KRVSA 279 ++DF + +E + + D+ K D + K + Sbjct: 347 DFYIDFELENEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLIEVKEGDCCVKCGAKLKQS 406 Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE+SHD KG I Sbjct: 407 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEASHDEKGCI 466 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W ++APF + +I D+ + K+Y L+ +G +V DD E+ G + +L+G Sbjct: 467 WNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMNDFELMG 526 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 FP ++VG K + +++E+ R I+E + +E++ + Sbjct: 527 FPYALVVG-KGLEKNEIELIQREGLIKELIKTDELMEILKKKV 568 >gi|220912189|ref|YP_002487498.1| prolyl-tRNA synthetase [Arthrobacter chlorophenolicus A6] gi|219859067|gb|ACL39409.1| prolyl-tRNA synthetase [Arthrobacter chlorophenolicus A6] Length = 599 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 99/238 (41%), Positives = 139/238 (58%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+ FL L+E+P DAE+ASHKL++R G I + + GIY+WLPLG L V +IREE Sbjct: 1 MSQLFLRTLREDPVDAEVASHKLLVRAGYIRRAAPGIYTWLPLGLSVLRKVEQVIREEMA 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+ P L + + + R+ YG+ + RL DR + PTHEE+ T + + Sbjct: 61 AIGAQEVHFPALLPREPYEATNRWTEYGEGLFRLQDRKGADYLLAPTHEEMFTLLVKDLY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP + YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G SY +YL Sbjct: 121 SSYKDLPLSLYQIQNKYRDEARPRAGLLRGREFIMKDSYSFDVDDAGLDASYAAHRSAYL 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 +IF RLGL +P+ A +G +GG S EF+ + GE S + + T Sbjct: 181 KIFERLGLDVVPVAATAGAMGGSRSEEFLFPTEIGEDTFVRSAAGYAANVEAVTTVVP 238 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 65/191 (34%), Positives = 102/191 (53%), Gaps = 5/191 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 + + D P+ +ARGIE+GHIF G KY+ + +GK V MG Sbjct: 411 GVIECTEVRAGDPAPDGSGPLETARGIEMGHIFQLGRKYAAALDLKVLDQNGKQVTVTMG 470 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R VAA+ E++HD KG+ WP +VAP + ++ + + A E++ L Sbjct: 471 SYGVGVTRAVAALAEANHDAKGLTWPRAVAPADVHVVAVGKG-EDIFAAAEQLSVGLEAA 529 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV +DD G +F A+LLG P + VG + + D VEIK R TG E++++++ Sbjct: 530 GLDVIYDDRFKVSPGVKFGDAELLGVPTILAVG-RGLVDGVVEIKDRRTGEAENVAVDKA 588 Query: 435 INYASHRFSNN 445 ++Y + N+ Sbjct: 589 VDYVVNAVRNS 599 >gi|213691491|ref|YP_002322077.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213522952|gb|ACJ51699.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457566|dbj|BAJ68187.1| prolyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 604 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 107/284 (37%), Positives = 156/284 (54%), Gaps = 2/284 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DA++ S KL+ R G I + + GI++WLPLG + L+ + AIIREE Sbjct: 7 RMSTMFLRTLREDPADADVDSAKLLQRAGYIRKAAPGIWTWLPLGLRVLNKIEAIIREEI 66 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+ P L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 67 NGIGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDM 126 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG + +Y +Y Sbjct: 127 YSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTIDEEGMRKAYYDERGAY 186 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF-- 239 RIF RL LK +P+ A SGP+GG S EF+ GE + + + + +T Sbjct: 187 ERIFQRLDLKYVPVFAMSGPMGGSASEEFLAPMPIGEDTFALAPSGKAWNVEALSTPELP 246 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 + S + P A T D E+ P + + Sbjct: 247 EIDASATPAASKEATPDAKTIDNMIERANADHPRTDGREWQASD 290 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 4/191 (2%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLP 297 ++ + ++V + + D P+ RG+E+G +F G KYS Sbjct: 396 ENEVDYYNLVYGRDFKADGVVEAVEVRHGDMSPDGSGPLSFERGVEIGQVFQLGLKYSKA 455 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + +GK V MG YGIG RV+A + E+ HD G+ W SV + Sbjct: 456 LDLKVLDQNGKAVPVWMGCYGIGVSRVLACIAETHHDEAGLAW-PSVIAPAAVHVVATGK 514 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D V + EK+ + L G +V +DD + G +F A+L+G PL +VG +V+D + Sbjct: 515 DAVAFEGAEKLVSELEAKGLEVIYDDRKKVSPGVKFKDAELIGVPLVAVVGRDYVNDGTI 574 Query: 417 EIKHRLTGIRE 427 E++ R + Sbjct: 575 ELRDRNGENKV 585 >gi|328947096|ref|YP_004364433.1| threonyl-tRNA synthetase [Treponema succinifaciens DSM 2489] gi|328447420|gb|AEB13136.1| threonyl-tRNA synthetase [Treponema succinifaciens DSM 2489] Length = 585 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 74/447 (16%), Positives = 154/447 (34%), Gaps = 45/447 (10%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 ++ +L+E RD +L L + G W P G + +RE+ + G Sbjct: 172 YITMLEEADKRDHRKLGVQLDLF--HLDPEDPGQIFWHPNGWTMYVTLQDYMREKIRKDG 229 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 +E++ P + LW SG + Y K M + + + P + +IF S ++SY Sbjct: 230 YMEVNTPAIMPRSLWERSGHWGHYQKNMF-VTESEKRMFAIKPMNCPGALEIFNSRVRSY 288 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 ++LP + R+E G+MR R F+ DA+ + + Sbjct: 289 KDLPLRLAEFGHCVRNEPSGTLHGIMRVRGFVQDDAHIICTEDQIESEVSKFCRLLLDVY 348 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 K++ ++ + P E A+ C M++ I Sbjct: 349 KDFGFDKNLLVKLSTMPEDHVGDLETWQHAEKAL-AAACKSAGMEYEIQ----------- 396 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D+L + ++ + ++A + G Sbjct: 397 -----PGEGAFYGPKLEF---TLIDALGRQWQCGTIQLDYQLP------SAERLNAEYIG 442 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 AD + H+ + +G++ ++ ++ G W + + Sbjct: 443 ADNQKHHPVMLHRAVLGSLERFLGILIENYAGVFPAWLSFEQVAVVPVAP------EFNA 496 Query: 364 ACEKIYARLSKVGCD--VFWDDMGEQIGSQFAV-ADLLGFPLQVIVGSKFVSDSKVEIKH 420 EK+ L +G + DD + ++ + P ++VG K ++ V + Sbjct: 497 YAEKVADELKSLGVRANAYTDDSNMK--NKIKNISTEHRTPYILVVGEKEQGENSVTCRF 554 Query: 421 RLTGI--REDMSLEEVINYASHRFSNN 445 R + ++ +L+E +Y + + Sbjct: 555 RFSSKIPQKTFALKEFEDYVLDKIRTH 581 >gi|297243824|ref|ZP_06927754.1| prolyl-tRNA synthetase [Gardnerella vaginalis AMD] gi|296888245|gb|EFH26987.1| prolyl-tRNA synthetase [Gardnerella vaginalis AMD] Length = 604 Score = 211 bits (538), Expect = 2e-52, Method: Composition-based stats. Identities = 107/283 (37%), Positives = 156/283 (55%), Gaps = 2/283 (0%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+ FL L+E+P DA++ S KLM R G I + + G+++WLPLG K L+ V AIIREE N Sbjct: 1 MSQLFLRTLREDPADADVTSAKLMQRAGYIRKSAPGVWTWLPLGLKVLNKVQAIIREEIN 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+ P L + + + R++ YG + RL DR++ + PTHEEV T + + Sbjct: 61 GIGAQEVHFPALLPREPYEATNRWEEYGDNIFRLKDRHEADYLLAPTHEEVFTLLVKDMY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP T YQIQ K+RDE RPR G++R REF+M+D YSF + +G K +Y + +Y Sbjct: 121 SSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMQDGYSFSIDEDGLKSAYVEERAAYA 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--DFD 240 RIF+RLG+K + + A SGP+GG S EF+ GE + + + + T D Sbjct: 181 RIFNRLGIKYVIVHAVSGPMGGSDSEEFLAPMPIGEDTFALAPSGKAWNVEALTTPEMSD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 S E P A T + + D P + + Sbjct: 241 VDYSATPAAEALETPDAKTIEALVKVSNDLHPRKDGREWQADD 283 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 4/207 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLP 297 +D + + V + + D P+ RG+E+G +F G KYS Sbjct: 394 EDGKHVYNAVYGRDFEADGVVEAAQVRDGDMSPDGSGPLSFERGVEIGQVFQLGLKYSKA 453 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + + +GK V MG YGIG RV+A + E+ HD G+ WP ++AP ++ ++ Sbjct: 454 LGLSVLNENGKAVPVWMGCYGIGVSRVIACLAETHHDDAGLAWPMAIAPAQVHVVATG-K 512 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 DQV DA EK+ LSK G +V +DD G +F A+L+G PL + G V++ + Sbjct: 513 DQVAFDAAEKVVEELSKQGIEVIFDDRPKVSPGVKFKDAELVGVPLIAVAGRDTVNNGTI 572 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 EI+ R E + ++E + R Sbjct: 573 EIRDRNGSNVEAVPVDEAASRIVKRVK 599 >gi|154487350|ref|ZP_02028757.1| hypothetical protein BIFADO_01200 [Bifidobacterium adolescentis L2-32] gi|154083868|gb|EDN82913.1| hypothetical protein BIFADO_01200 [Bifidobacterium adolescentis L2-32] Length = 677 Score = 211 bits (538), Expect = 2e-52, Method: Composition-based stats. Identities = 65/459 (14%), Positives = 134/459 (29%), Gaps = 50/459 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L+E RD ++ L + + G+ + P G ++ + RE + Sbjct: 242 KAYQTRLEEAAKRDHRKLGAEMDLFS-FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRK 300 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHE 111 + P + L+ SG Y M + P + Sbjct: 301 HHYSFVQTPHITKGGLYETSGHLQWYKDSMYPPMRLDEEKDENGNVIKQGFDYYLKPMNC 360 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 361 PMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMK 420 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L + GL + + + S + + Sbjct: 421 DEL-KSLLTFVLGLLKDFGLDDFYLELST----------------KDPHKYVGSDEIWEE 463 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + A Y + + D++ +VS ++ F Sbjct: 464 ATNTLAEVAKESGLDLVDDPCGAAFYGPKI---SVQARDAIGRTWQVSTIQLD----FNL 516 Query: 291 GTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 ++ + ADG + G++ AV+ + G W V + Sbjct: 517 PERF----KLEYIAADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGV 572 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 + +K A L + D ++ G + A P +IVG + Sbjct: 573 PVA------DEFAPHLQKFIASLEEETVRCEIDLSDDRFGKKIRNASKSKAPFILIVGEE 626 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 ++++ V + R + ++E V Sbjct: 627 DMNNNAVSFRFRDGSQLNGVPVDEAKANILTVIKKRVQV 665 >gi|307636813|gb|ADN79263.1| threonyl tRNA sythetase [Helicobacter pylori 908] gi|325995402|gb|ADZ50807.1| Threonyl-tRNA synthetase [Helicobacter pylori 2018] Length = 612 Score = 211 bits (538), Expect = 2e-52, Method: Composition-based stats. Identities = 79/441 (17%), Positives = 152/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ WLP G + + ++ + G Sbjct: 207 YLFQIEEAKKRDHRKLGVELGLFS-FDDEIGAGLPLWLPKGARLRKRIEDLLSKALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + + + Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQSE--VSAILDFTHK 382 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + S M + P E + + + Sbjct: 383 IMKAFDFSYEMELSTRPAKSIGDDE-----------------VWEKATNALKEALKEHRI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 DYKIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + Sbjct: 475 ERNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHHV 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + +A+ P+ +++G++ V + I+ R Sbjct: 529 FALKLKEELKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 589 QAQYKMPLKEFLNMVESKMQE 609 >gi|319760484|ref|YP_004124422.1| threonyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF] gi|318039198|gb|ADV33748.1| threonyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF] Length = 411 Score = 211 bits (538), Expect = 2e-52, Method: Composition-based stats. Identities = 73/434 (16%), Positives = 136/434 (31%), Gaps = 40/434 (9%) Query: 14 NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 +D S++L L + G+ W G + IR++ + E+ P Sbjct: 9 KKKDHRTLSNQLDLF--HTQDDAPGMIFWHKNGWIIFQELKKFIRKKLQQYQYQEVKSPI 66 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + +LW ++G +D+Y E + + ++ P + IF IKSY++LP Sbjct: 67 MIDQELWKKTGHWDNYY-EHIFITASENRTYCIKPMNCPGHIQIFNYGIKSYKDLPLRIA 125 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 + R+E G+MR REF DA+ F + N ++H G K Sbjct: 126 EFGHCHRNEPSGSLHGLMRIREFTQDDAHIFCSIEQIPTEL-NYCIKMMYDVYHTFGFKK 184 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 I ++ + PI D + Q Sbjct: 185 IIVKLSTRPIKR-----------------IGEDSIWDITEQCLVHILQKKNIEFTYQPQD 227 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y + L DSL + ++ F + A + + K Sbjct: 228 GAFYGPKIEFI---LLDSLKRAWQCGTVQLD----FSLP----KLLKAKYIDNNNKYQIP 276 Query: 313 -QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + +G++ +I + G W +++ I R Sbjct: 277 VMIHRAILGSIERFIGLITEEYSGFLPTWLAPTQIVLMNVT------DAQSLYVTNIANR 330 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L V D E+IG + + + P +I G+ V + I+ + ++ Sbjct: 331 LKFENFRVQIDLRNEKIGCKIRLHTMHRVPYMIICGNSEVDHGTISIRTFRGRKINNYNI 390 Query: 432 EEVINYASHRFSNN 445 + I + Sbjct: 391 DTFIQKLKQEINTY 404 >gi|114659237|ref|XP_510628.2| PREDICTED: threonyl-tRNA synthetase-like 2 [Pan troglodytes] Length = 801 Score = 211 bits (538), Expect = 2e-52, Method: Composition-based stats. Identities = 73/448 (16%), Positives = 149/448 (33%), Gaps = 43/448 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + + + +E RD + L H S G +LP G + + IREE Sbjct: 385 KMMRDWEKFQEEAKNRDHRKIGKEQELF--FFHDLSPGSCFFLPRGAFIYNTLTDFIREE 442 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ E+ P + ++ LW SG + Y + M D P + +F Sbjct: 443 YHKRDFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIEKDT-FALKPMNCPGHCLMFAH 501 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R +P F + R+EL G+ R R F DA+ F + + Sbjct: 502 RPRSWREMPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQ-IEEEIKGCLR 560 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G F + T + + Sbjct: 561 FLQSVYSTFGFS------------------FQLNLSTRPENFLGEIEMWNEAEKQLQNSL 602 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D + A Y D+ K+ D++ + + ++ F ++ + Sbjct: 603 MDFGEPWKMNPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRF----N 651 Query: 300 ATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 T+ G V + +G++ + A++ + G WP ++P ++ +I + Sbjct: 652 LTYMNKVGILGRPVIIHRAILGSVERMIAILS---ENYGGKWPFWLSPRQVMVIPVGP-- 706 Query: 359 QVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 C ++ + + G D D + + A L + ++VG K D+ V Sbjct: 707 -TCEKYALQVSSEFFEEGFMADVDLDHNCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVN 765 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ R I ++ + I+ + Sbjct: 766 VRTRDNKIHGEILVTSAIDKLKNLKKTR 793 >gi|313665156|ref|YP_004047027.1| threonine--tRNA ligase [Mycoplasma leachii PG50] gi|312949904|gb|ADR24500.1| threonine--tRNA ligase [Mycoplasma leachii PG50] Length = 639 Score = 211 bits (538), Expect = 2e-52, Method: Composition-based stats. Identities = 72/436 (16%), Positives = 155/436 (35%), Gaps = 37/436 (8%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD + + L + G G+ WLP G + + +R+++ I + P + Sbjct: 236 RDHRLINKTLNIF-GFDQLVGAGLPLWLPNGFIVKNEIEKYLRQKEWEYDYIPVETPPIG 294 Query: 76 SADLWVESGRYDSYGKEMLRLADR---NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + +L+ SG +D YG++M + + +D+ I P + +++ +SYR+LP Sbjct: 295 TVELYKTSGHWDHYGEDMFQPFNGGKGSDEQFILRPMNCPHHIAVYKQEQRSYRDLPLRI 354 Query: 133 YQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 + ++ R E G+ R R + D++ F + + R K Sbjct: 355 CEHAIQHRFESSGSLTGLERVRGMKLTDSHIFVRSDQIEDEF-------------RSTYK 401 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDIISLNSIVE 250 I ++ I D + L D + F D D S D+ Sbjct: 402 LISEVLKTFNIQIDYLS--LSLRDPNDKVKFYKDDLMWDKAESSLEKVLIDLGLKYEKRI 459 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D+ ++ + VS ++ + Sbjct: 460 GDAAFYGPKLDI---QIKTAQNHEITVSTIQLDF-------LMPNKFDLIYIDKDQKLVR 509 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + + IG A + + + P +AP ++ +I I + + I+ Sbjct: 510 PIMIHRGLIGTYERFIATLL---EQTKGVLPLWLAPKQVEIIPI---SESNLEYANLIHQ 563 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +L K D E++ + A P Q+++G+K V ++ + + + + +S Sbjct: 564 KLKKEFIRSHIDLRDERLSYKIRDAQTKKVPYQLVLGNKEVENNTITYRQYGSEKQITIS 623 Query: 431 LEEVINYASHRFSNNR 446 ++E ++ + + + Sbjct: 624 IQEFVDMLKQQIKDKK 639 >gi|76801848|ref|YP_326856.1| threonyl-tRNA synthetase [Natronomonas pharaonis DSM 2160] gi|121731906|sp|Q3IRE7|SYT_NATPD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|76557713|emb|CAI49296.1| threonine--tRNA ligase [Natronomonas pharaonis DSM 2160] Length = 642 Score = 211 bits (538), Expect = 2e-52, Method: Composition-based stats. Identities = 77/444 (17%), Positives = 135/444 (30%), Gaps = 43/444 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRT 64 + + RD +L L + I G+ + P G+ L + + + + Sbjct: 231 FLQRREEAKKRDHRKLGQELDLFS--IPDVTGPGLPLYHPNGKAVLRELEDFVDQLNDDQ 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P L +LW +SG Y++Y +M L D ND+ P + IF S Sbjct: 289 GYEFVETPHLFRTELWKQSGHYENYVDDMF-LLDVNDEEYGLKPMNCPGHATIFNQGNWS 347 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + + +R E R G+ R F + D + F + N + Sbjct: 348 YRDLPVRYAENGKVYRKEQRGELSGLSRVWAFTIDDGHLFVERDAIEQE-VNVIMDQIEE 406 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + L A T + S + + + + Sbjct: 407 VLDTFDLDYEVALA------------------TRPEKSVGSDEIWEQAQTQLRSVLESSG 448 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I A Y D E D+L N G T+ Sbjct: 449 MDYDIESGDGAFYGPKIDFAFE---DALGRNW--------DGPTVQLDFNMPERFDLTYT 497 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G D ++H + G+ V+ DG W + I Sbjct: 498 GEDNEEHRPVMIHRALYGSYERFFMVLIEHFDGNFPTW------LAPEQVRILPVSDDNI 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 +++ R V +D +G + A P ++VG V ++ R Sbjct: 552 GYAKQLKNRYLD-DFRVEIEDRSWTVGKKIQTAHDDRVPYMLVVGDNEEEAGTVSVRDRF 610 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 R+D+ +E ++ + R Sbjct: 611 EDERKDVDVETFRDHLASEVEEKR 634 >gi|317176942|dbj|BAJ54731.1| threonyl-tRNA synthetase [Helicobacter pylori F16] Length = 612 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 77/441 (17%), Positives = 150/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ WLP G + + ++ + G Sbjct: 207 YLFQIEEAKKRDHRKLGVELGLFS-FNDEIGAGLPLWLPKGARLRKRIEDLLSKALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + L Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCS-----FEQIQSEVSAILDF 379 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + I + + T + + + + Sbjct: 380 --------------THKIMQAFDFSYEMELSTRPAKSIGDDKVWEKATNALKEALKEHRI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 DYKIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + Sbjct: 475 ECNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHHV 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + A+ P+ +++G++ + + I+ R Sbjct: 529 FALKLKEELKKRDIFVEVLDKNDSLNKKVRSAEKQKIPMILVLGNEEMESEILSIRDREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 589 QAQYKMPLKEFLNMVESKMQE 609 >gi|237750837|ref|ZP_04581317.1| threonyl-tRNA synthetase [Helicobacter bilis ATCC 43879] gi|229373282|gb|EEO23673.1| threonyl-tRNA synthetase [Helicobacter bilis ATCC 43879] Length = 612 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 67/447 (14%), Positives = 145/447 (32%), Gaps = 46/447 (10%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y + + RD ++ L T G+ WLP G + + ++ Sbjct: 198 LKQYLFQLEEAKKRDHRKLGVEMELFT-FEEDVGAGLPIWLPKGARLRRRIEELLTRALI 256 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + P + +D+W SG Y Y + M ++ P + ++++ I Sbjct: 257 LNEYEPVRCPEILKSDVWKISGHYTHYKENM-YFTTIDEVEYGIKPMNCVGHIKVYQNSI 315 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR LP FY+ + R E G++R REF DA+ F + N + Sbjct: 316 RSYRELPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCRPEQIENE-VNNILRFT 374 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +I + G + P + + Sbjct: 375 HKIMNAFGFSYEM-ELSTRPEQS-----------------IGEDSVWESATLALQNALAG 416 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ K+ D++ + I++ + + Sbjct: 417 NNISYQVDEGGGAFYGPKIDI---KITDAIGRKWQCGTIQIDMNLP--------ERFNLS 465 Query: 302 FKGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + + + V + +G+ A++ + + + I ++ Sbjct: 466 YIDENNEHAMPVMIHRAILGSFERFVAILTEHFG------GEFPFFIAPTQVIIIPINES 519 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + + L G E + + A+ P+ ++G K ++++ V I+ Sbjct: 520 HVSMAQNLQNELRLRGIYAELSLKNESLNKKIRTAEKQKVPMIALIGDKELNNNSVSIRD 579 Query: 421 R----LTGI--REDMSLEEVINYASHR 441 R +G + +MS++E + S+ Sbjct: 580 RRMKMDSGENMQYEMSMQEFLEKTSNL 606 >gi|86151603|ref|ZP_01069817.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94] gi|85841232|gb|EAQ58480.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94] Length = 569 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 112/271 (41%), Positives = 159/271 (58%), Gaps = 4/271 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 2 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 62 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 122 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ E Sbjct: 182 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICENC-DYAANVEAA--- 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 E+ A YA+ N K DSL Sbjct: 238 KRAKKTCQDERPEANYASKFHTPNIKTIDSL 268 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 64/223 (28%), Positives = 110/223 (49%), Gaps = 6/223 (2%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS---DVHNEKLFDSLPEN--KRVSA 279 ++DF + +E + + D+ K D + K + Sbjct: 347 DFYIDFELENEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLIEVKEGDCCVKCGAKLKQS 406 Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE++HD KG I Sbjct: 407 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEANHDEKGCI 466 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W ++APF + +I D+ + K+Y L+ +G +V DD E+ G + +L+G Sbjct: 467 WNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMNDFELMG 526 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 FP +++G K + ++++E+ R ++E + +E++ + Sbjct: 527 FPYALVIG-KGLENNEIELIQREDLVKELIKTDELMEILKKKV 568 >gi|317506992|ref|ZP_07964761.1| threonyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974] gi|316254750|gb|EFV14051.1| threonyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974] Length = 683 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 65/448 (14%), Positives = 130/448 (29%), Gaps = 49/448 (10%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + G+ + P G + R + G ++ Sbjct: 257 EAERRDHRKLGTELDLFS-FPDELGSGLPVFHPKGGILRKELEDYSRAKHIEAGYEFVNT 315 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDIFR 119 P + + L+ SG D Y M + + P + + IFR Sbjct: 316 PHITKSHLYEVSGHLDWYADGMFPPMHVDAELDADGAVRKPGQDYYLKPMNCPMHNLIFR 375 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 S +SYR LP ++ +R E G+ R R DA+ + + K Sbjct: 376 SRGRSYRELPLRLFEFGSVYRYEKSGVIHGLTRVRGMTQDDAHIYCTRDQMKDEL-AKTL 434 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L + GL + + E + S + + + Sbjct: 435 QFVLDLLRDYGLDDFYLELST----------------KDEEKFVGSDEIWEEATRTLAEV 478 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + A Y + + D+L ++S ++ F ++ Sbjct: 479 AEASGLTLVPDPGGAAFYGPKI---SVQAKDALGRTWQMSTIQLD----FNLPERF---- 527 Query: 299 SATFKGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + G G V + G++ V+ + +P ++P + I + Sbjct: 528 GLEYTGPSGHREQPVMIHRALFGSIERFIGVLV---EHYAGAFPAWLSPVQAMGIPVSDD 584 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 L G D +++ + P V+ G++ V V Sbjct: 585 HVPHL---RAFVDSLRAGGVRAHLDTSDDRMQKKIFTHTAQKIPFLVLAGARDVEAGTVS 641 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 + R G R + ++E + Sbjct: 642 FRFRDGGQRNAVPVDEAKRLVLDWVARR 669 >gi|189440768|ref|YP_001955849.1| prolyl-tRNA synthetase [Bifidobacterium longum DJO10A] gi|189429203|gb|ACD99351.1| Prolyl-tRNA synthetase [Bifidobacterium longum DJO10A] Length = 604 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 107/284 (37%), Positives = 156/284 (54%), Gaps = 2/284 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DA++ S KL+ R G I + + GI++WLPLG + L+ + AIIREE Sbjct: 7 RMSTMFLRTLREDPADADVDSAKLLQRAGYIRKAAPGIWTWLPLGLRVLNKIEAIIREEI 66 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+ P L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 67 NGIGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDM 126 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG + +Y +Y Sbjct: 127 YSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFVMKDAYSFTIDEEGMRKAYYDERGAY 186 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF-- 239 RIF RL LK +P+ A SGP+GG S EF+ GE + + + + +T Sbjct: 187 ERIFQRLDLKYVPVFAMSGPMGGSASEEFLAPMPIGEDTFALAPSGKAWNVEALSTPELP 246 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 + S + P A T D E+ P + + Sbjct: 247 EIDASTTPAASKEATPDAKTIDNMIERANADHPRTDGREWQASD 290 Score = 131 bits (329), Expect = 3e-28, Method: Composition-based stats. Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 4/191 (2%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLP 297 ++ + ++V + + D P+ RG+E+G +F G KYS Sbjct: 396 ENEVDYYNLVYGRDFKADGVVEAVEVRHGDMSPDGSGPLSFERGVEIGQVFQLGLKYSKA 455 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + +GK V MG YGIG RV+A + E+ HD G+ W SV + Sbjct: 456 LDLKVLDQNGKAVPVWMGCYGIGVSRVLACIAETHHDEAGLAW-PSVIAPAAVHVVATGK 514 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D V + EK+ A L G +V +DD + G +F A+L+G PL +VG +V+D + Sbjct: 515 DAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFKDAELIGVPLVAVVGRDYVNDGTI 574 Query: 417 EIKHRLTGIRE 427 E++ R + Sbjct: 575 ELRDRNGENKV 585 >gi|312134020|ref|YP_004001359.1| pros [Bifidobacterium longum subsp. longum BBMN68] gi|311773326|gb|ADQ02814.1| ProS [Bifidobacterium longum subsp. longum BBMN68] Length = 604 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 107/284 (37%), Positives = 156/284 (54%), Gaps = 2/284 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DA++ S KL+ R G I + + GI++WLPLG + L+ + AIIREE Sbjct: 7 RMSTMFLRTLREDPADADVDSAKLLQRAGYIRKAAPGIWTWLPLGLRVLNKIEAIIREEI 66 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+ P L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 67 NGIGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDM 126 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG + +Y +Y Sbjct: 127 YSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFVMKDAYSFTIDEEGMRKAYYDERGAY 186 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF-- 239 RIF RL LK +P+ A SGP+GG S EF+ GE + + + + +T Sbjct: 187 ERIFQRLDLKYVPVFAMSGPMGGSASEEFLAPMPIGEDTFALAPSGKAWNVEALSTPELP 246 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 + S + P A T D E+ P + + Sbjct: 247 EIDASTTPAASKEATPDAKTIDNMIERANADHPRTDGREWQASD 290 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 4/191 (2%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLP 297 ++ + ++V + + D P+ RG+E+G +F G KYS Sbjct: 396 ENEVDYYNLVYGRDFKVDGVVEAVEVRHGDMSPDGSGPLSFERGVEIGQVFQLGLKYSKA 455 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + +GK V MG YGIG RV+A + E+ HD G+ W SV + Sbjct: 456 LDLKVLDQNGKAVPVWMGCYGIGVSRVLACIAETHHDEAGLAW-PSVIAPAAVHVVATGK 514 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D V + EK+ A L G +V +DD + G +F A+L+G PL +VG +V+D + Sbjct: 515 DAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFKDAELIGVPLVAVVGRDYVNDGTI 574 Query: 417 EIKHRLTGIRE 427 E++ R + Sbjct: 575 ELRDRNGENKV 585 >gi|283955965|ref|ZP_06373455.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336] gi|283792625|gb|EFC31404.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336] Length = 568 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 113/271 (41%), Positives = 160/271 (59%), Gaps = 4/271 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 1 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 61 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 121 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ E Sbjct: 181 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICENC-DYAANVEAAKRA 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 I E+ A YA+ N K DSL Sbjct: 240 KKI---CQDERPEANYASKFHTPNIKTIDSL 267 Score = 156 bits (394), Expect = 7e-36, Method: Composition-based stats. Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 6/223 (2%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS---DVHNEKLFDSLPEN--KRVSA 279 ++DF + +E + + D+ K D + K + Sbjct: 346 DFYIDFELENEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLIEVKEGDCCAKCGAKLKQS 405 Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE+SHD KG I Sbjct: 406 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEASHDEKGCI 465 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W ++APF + +I D+ + K+Y L+ +G +V DD E+ G + +L+G Sbjct: 466 WNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMNDFELMG 525 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 FP +++G K + ++++E R ++E + +E++ + Sbjct: 526 FPYALVIG-KGLENNEIEFIQREGLVKELIKTDELMEILKKKV 567 >gi|213966110|ref|ZP_03394297.1| threonyl-tRNA synthetase [Corynebacterium amycolatum SK46] gi|213951208|gb|EEB62603.1| threonyl-tRNA synthetase [Corynebacterium amycolatum SK46] Length = 686 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 64/455 (14%), Positives = 136/455 (29%), Gaps = 49/455 (10%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y +L+ RD +L L + + G + G + + R Sbjct: 254 EYLDRMLEAEKRDHRRLGSELDLFS-FPDEIGSGFPVFHVKGGIIRNEMEQHSRRRHIEA 312 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND------------KAMIYGPTHEE 112 G ++ P + DL+ +SG D Y M + + P + Sbjct: 313 GYDFVNTPHVTKGDLFKKSGHLDFYADGMFPPMQLDGEYDEHGNCTKAPQDYYVKPMNCP 372 Query: 113 VMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSK 171 + IF S +SYR LP ++ +R E G+ R+R F DA+ + T + + Sbjct: 373 MHNLIFASRGRSYRELPIRMFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYC-TEDQLE 431 Query: 172 HSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 + + + GL + + E + S + + Sbjct: 432 EELTNVLDFIISLLRDYGLDDFYLELST----------------KDEKKFVGSDEIWEKS 475 Query: 232 IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 D A Y + + D++ ++S ++ F Sbjct: 476 TAILQRVADASGLELVPDPGGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FNLP 528 Query: 292 TKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 ++ + DG + G++ V+ + G W I Sbjct: 529 ERF----ELEYTAPDGTKKRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPEQVVGIP 584 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 + C E A+L G V D +++ + P ++ G++ Sbjct: 585 VA------DDCIPHLEDFAAQLKSRGIRVHVDTSDDRMQKKIRNHTQAKVPFMILAGARD 638 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 + V + +++E+ ++ ++ Sbjct: 639 IEAGAVSFRFLDGTQINGVAVEKAVDIICDWVASR 673 >gi|296125160|ref|YP_003632412.1| prolyl-tRNA synthetase [Brachyspira murdochii DSM 12563] gi|296016976|gb|ADG70213.1| prolyl-tRNA synthetase [Brachyspira murdochii DSM 12563] Length = 578 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 114/251 (45%), Positives = 162/251 (64%), Gaps = 1/251 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK F+P L+E P DA IAS+KLM+R + + S G+YS+LPLG + L ++ IIREE Sbjct: 1 MRLSKLFMPTLKEAPSDAIIASNKLMIRAALARKISNGLYSYLPLGVRVLSKISNIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G+ E +P L S +L SGR++ + KE+ RL DRND M GPTHEE T ++ Sbjct: 61 MDAIGSNECIMPILVSKELLTPSGRWERFKKELFRLKDRNDVDMAMGPTHEEAFTITAQN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY++LP T YQI KFRDE+RPRFGV+RS+EF MKDAYSF +T E +YN M + Sbjct: 121 EIQSYKDLPLTLYQIHTKFRDEIRPRFGVIRSKEFTMKDAYSFHITKECLDKTYNDMSRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R+GL ++ ++A+SG +GG+ S EF+VL++ GE + D+ E + Sbjct: 181 YTKIFKRMGLDTVSVKADSGAMGGEGSEEFMVLSEVGEETIIFCSKC-DYRANVEKANVK 239 Query: 241 DIISLNSIVEQ 251 + S ++ Sbjct: 240 KDEEVKSYTDK 250 Score = 151 bits (381), Expect = 3e-34, Method: Composition-based stats. Identities = 58/189 (30%), Positives = 96/189 (50%), Gaps = 2/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 D K D PE +G+E+GHIF G KY+ + + K+ MG Sbjct: 381 VWGDFRTAKEGDKCPECGETLYQKKGLELGHIFKLGDKYTQAFNFKVLDENNKEITPIMG 440 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R +A+VIE ++D KGII+P SVAP++ ++ I + E+IY L+ + Sbjct: 441 CYGIGVNRALASVIEQNYDDKGIIFPISVAPYEAIVVAIDKEGEESFKKAEEIYNALNAL 500 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 + +DD E++G + DL+G P++++VG K + VE K R + ++ +E++ Sbjct: 501 KVETMFDDRKERLGVKLNDCDLIGIPMRIMVGKKSLQRGVVEFKLRSSSESIEVKADEIV 560 Query: 436 NYASHRFSN 444 Y + Sbjct: 561 EYVKAKKEE 569 >gi|308062983|gb|ADO04870.1| threonyl-tRNA synthetase [Helicobacter pylori Sat464] Length = 612 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 150/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ WLP G + + ++ + G Sbjct: 207 YLFQIEEAKKRDHRKLGVELGLFS-FDDEIGAGLPLWLPKGARLRKRIEDLLSKALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + L Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCS-----FEQIQSEVSAILDF 379 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + I + + T + + + + Sbjct: 380 --------------THKIMQAFDFSYEMELSTRPAKSIGDDKVWEKATNALKEALKEHRI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 DYKIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + Sbjct: 475 EYNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHHV 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + A+ P+ +++G++ V + I+ R Sbjct: 529 FALKLKEALKKRDIFVEVLDKNDSLNKKVRSAEKQKIPMILVLGNEEVETEILSIRDREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 589 QAQYKMPLKEFLNMVESKMQE 609 >gi|145511956|ref|XP_001441900.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124409161|emb|CAK74503.1| unnamed protein product [Paramecium tetraurelia] Length = 609 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 80/441 (18%), Positives = 162/441 (36%), Gaps = 46/441 (10%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 SK F ++ D L ++ + G +LP G K + + +IR+E Sbjct: 212 SKLFQEYQKQQECDHRHIGKHQHLFV--FNKLAPGSAFFLPHGTKIYNKLIEMIRKEYRE 269 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L + +LW +SG D Y + + +D M P + ++++ Sbjct: 270 RGYQEVITPQLFNKELWKQSGHLDKYAENIYMT---HDHQMGLKPMNCPGHCLLYKTLQH 326 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY+ LP F + R+E+ G+ R R+F DA+ F + + Sbjct: 327 SYKELPIRFADFGVLHRNEVHGTLTGLTRVRKFTQDDAHIFCTIEQIQQE-IKNTLDFLS 385 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 R++ R G + + P + D D Sbjct: 386 RVYGRFGFT-WELTLSTRP-----------------DKYIGDLQIWDEAERQLRIALSD- 426 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + + A Y DV + + + + G I T+ Sbjct: 427 -TQYTENPGDGAFYGPKIDVLI----------RDHNQKQHQCGTI-QLDFNLPERFDLTY 474 Query: 303 KGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + K V + +G++ + A++ + WP ++P ++ +I + ++ Sbjct: 475 HHENDKFSRPVMIHRAILGSIERMMAILT---EQYNGKWPFWLSPRQVMIIPV---SEIS 528 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + ++IY +L K+G +V +D + +G + ++L F + VG+K + V+++ R Sbjct: 529 KQYAKEIYDQLYKLGFEVELEDTEQTLGKRIRKGEMLHFNYIITVGAKEQESNTVDVRER 588 Query: 422 LTGIR-EDMSLEEVINYASHR 441 + + M L+E I + Sbjct: 589 GDNHKHQSMKLDEFITKINQL 609 >gi|288802831|ref|ZP_06408268.1| threonine--tRNA ligase [Prevotella melaninogenica D18] gi|288334648|gb|EFC73086.1| threonine--tRNA ligase [Prevotella melaninogenica D18] Length = 649 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 82/444 (18%), Positives = 154/444 (34%), Gaps = 39/444 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD ++ L + KG+ WLP G + + ++R Sbjct: 233 YLEMLEEAKKRDHRKIGKEMELFM-FSDRVGKGLPIWLPKGTQLRLRLQELLRRLLRPYN 291 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P + +L+V SG Y YGK+ + D+ + P + +I+ + Sbjct: 292 YQEVITPGIGGKNLYVTSGHYAHYGKDAFQPIHTPEEDEEYMLKPMNCPHHCEIYAYKPR 351 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP + FR E G+ R R F DA+ F P+ K + L Sbjct: 352 SYKDLPLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVR-PDQVKAEFENNIDIIL 410 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++F G + + D + + + D + + + Sbjct: 411 KVFKTFGFDNYEAQISLR--------------DPEDKEKYIGSDEVWEESEAAIKEACAE 456 Query: 243 ISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 LN+ VE A Y D + D++ ++ ++ F Sbjct: 457 KGLNARVELGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLPNRF--------KLE 505 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + G++ AV+ G +W + I + Sbjct: 506 YTAEDNSKKTPVMVHRAPFGSLERFTAVLIEHTAGHFPLW------LTPDQVAILPISEK 559 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +K+ A DD E+IG + +L P VIVG K ++ V ++ Sbjct: 560 YNDYAQKVKAYFDAHDVRSIMDDRNEKIGRKIRDNELKRVPYMVIVGEKEAAEGLVSMRQ 619 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 + G + M++E ++ + Sbjct: 620 QGGGEQATMTMEAFAERINNEVAE 643 >gi|86153499|ref|ZP_01071703.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843225|gb|EAQ60436.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13] Length = 569 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 112/271 (41%), Positives = 159/271 (58%), Gaps = 4/271 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 2 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 62 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 122 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ E Sbjct: 182 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICENC-DYAANVEAA--- 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 E+ A YA+ N K DSL Sbjct: 238 KRAKKTCQDERPEANYASKFHTPNIKTIDSL 268 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 64/223 (28%), Positives = 110/223 (49%), Gaps = 6/223 (2%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS---DVHNEKLFDSLPEN--KRVSA 279 ++DF + +E + + D+ K D + K + Sbjct: 347 DFYIDFELENEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLIEVKEGDCCVKCGAKLKQS 406 Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE++HD KG I Sbjct: 407 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEANHDEKGCI 466 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W ++APF + +I D+ + K+Y L+ +G +V DD E+ G + +L+G Sbjct: 467 WNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMNDFELMG 526 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 FP +++G K + ++++E+ R ++E + +E++ + Sbjct: 527 FPYALVIG-KGLENNEIELIQREDLVKELIKTDELMEILKKKV 568 >gi|261880448|ref|ZP_06006875.1| threonine-tRNA ligase [Prevotella bergensis DSM 17361] gi|270332871|gb|EFA43657.1| threonine-tRNA ligase [Prevotella bergensis DSM 17361] Length = 521 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 71/444 (15%), Positives = 143/444 (32%), Gaps = 36/444 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y L + + RD ++ L + KG+ WLP G + + ++R+ Sbjct: 103 EYLLMLEEAKKRDHRKIGKEMELFM-FSERVGKGLPIWLPKGTQLRLRLQELLRKLLKPY 161 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + S +L+V SG Y YGK+ + D+ + P + +I+ Sbjct: 162 NYQEVIAPGIGSKNLYVTSGHYAHYGKDAFQPIRTPEEDEEYMLKPMNCPHHCEIYARKP 221 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + R E G+ R R F DA+ F + + + Sbjct: 222 RSYKDLPLRIAEFGTVMRYEKSGELHGLTRVRSFTQDDAHIFVRPEQVKAE-FENVIDII 280 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++F G + + + S + + + + Sbjct: 281 QKVFAIFGFDNYEAQISLRD-------------PKDTDKYIGSDEIWEESQNAIREACQE 327 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 A Y D + D++ ++ ++ Sbjct: 328 KGMKAREEIGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLP--------ERFKLE 376 Query: 302 FKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D V + G++ AV+ G +W + I + Sbjct: 377 YTAEDNSKQVPVMIHRAPFGSLERFTAVLIEHTAGHFPLW------LTPDQVAILPISEK 430 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ + DD E+IG + +L P VIVG K ++ V ++ Sbjct: 431 FNDYALEVKKHFDANDVRAYIDDRNEKIGRKIRDNELKRVPYMVIVGEKEANEGLVSMRK 490 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 + G + M + + I ++ Sbjct: 491 QGGGEQASMKITDFIQRIKDEVAD 514 >gi|291457352|ref|ZP_06596742.1| proline--tRNA ligase [Bifidobacterium breve DSM 20213] gi|291381187|gb|EFE88705.1| proline--tRNA ligase [Bifidobacterium breve DSM 20213] Length = 597 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 107/283 (37%), Positives = 154/283 (54%), Gaps = 2/283 (0%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S FL L+E+P DA++ S KL+ R G I + + GI++WLPLG K L+ + IIREE N Sbjct: 1 MSTMFLRTLREDPADADVDSAKLLQRAGYIRKAAPGIWTWLPLGLKVLNKIEDIIREEIN 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+ P L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 61 GIGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDMY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG + +Y +Y Sbjct: 121 SSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTIDEEGMRKAYYDERGAYE 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF--D 240 RIF RL LK +P+ A SGP+GG S EF+ GE + + + + T + Sbjct: 181 RIFQRLDLKYVPVFAMSGPMGGSASEEFLAPMPIGEDTFALAPSGKAWNVEALTTPELPE 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 S + AP A T D E+ P + + Sbjct: 241 VDASNTPAASKEAAPDAKTIDNMIERANADHPRTDGREWQASD 283 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 4/207 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLP 297 ++ + ++V + + D P+ RG+E+G +F G KYS Sbjct: 389 ENEVDYYNLVYGRDFKADGVVEAVEVRHGDMSPDGSGPLSFERGVEIGQVFQLGLKYSKA 448 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + +GK V MG YGIG RV+A + E+ HD G+ W SV + Sbjct: 449 LDLKVLDQNGKAVPVWMGCYGIGVSRVLACIAETHHDEAGLAW-PSVIAPAAVHVVATGK 507 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D+ + EK+ A L G +V +DD + G +F A+L+G PL +VG +V+D + Sbjct: 508 DEKAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFKDAELIGVPLVAVVGRDYVNDGTI 567 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 EI+ R + + E + RF+ Sbjct: 568 EIRDRNGENKVAVPAAEAAGTLADRFA 594 >gi|148925913|ref|ZP_01809600.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486] gi|145844899|gb|EDK22003.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486] Length = 576 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 112/271 (41%), Positives = 159/271 (58%), Gaps = 4/271 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 9 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 68 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 69 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 128 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 129 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 188 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ E Sbjct: 189 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICENC-DYAANVEAA--- 244 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 E+ A YA+ N K DSL Sbjct: 245 KRAKKTCQDERPEANYASKFHTPNIKTIDSL 275 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 6/223 (2%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS---DVHNEKLFDSLPEN--KRVSA 279 ++DF + +E + + D+ K D + K + Sbjct: 354 DFYIDFELENEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLIEVKEGDCCVKCGAKLKQS 413 Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF G KYS M+A F +GK MG YGIG R++A E+SHD KG I Sbjct: 414 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVATEASHDEKGCI 473 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W ++APF + +I D+ + K+Y L+ +G +V DD E+ G + +L+G Sbjct: 474 WNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMNDFELMG 533 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 FP ++VG K + +++E+ R I+E + +E++ + Sbjct: 534 FPYALVVG-KGLEKNEIELIQREGLIKELIKTDELMEILKKKV 575 >gi|73954351|ref|XP_536509.2| PREDICTED: similar to threonyl-tRNA synthetase [Canis familiaris] Length = 789 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 71/453 (15%), Positives = 147/453 (32%), Gaps = 43/453 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 363 KMLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNTLIEFIRSE 420 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + P + +F Sbjct: 421 YRKRGFQEVVTPNIYNSRLWMTSGHWQHYSENMFSFEVEKEL-FALKPMNCPGHCLMFDH 479 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 480 RPRSWRELPLRIADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAIEQIEDE-IKGCLD 538 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E A+ Sbjct: 539 FLRTVYSIFGFSFKLN-LSTRPEKYLGDIEVWNQAEK-----------------QLENSL 580 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F +++L Sbjct: 581 NEFGEKWELNPGDGAFYGPKIDI---QIKDAIGRFHQCATIQLD----FQLPIRFNLTFV 633 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIE------SSHDGKGIIWPDSVAPFKISLIN 353 + D K V + +G++ + A++ P ++P ++ ++ Sbjct: 634 SH--DGDDKKRPVIVHRAILGSVERMIAILTENYGGKWWFKASSGTMPFWLSPRQVMVVP 691 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 + C + +K+ + V D D G + + A L + +++G K + Sbjct: 692 VGP---TCDEYAQKVRQQFHDAKFMVDIDLDPGCTLNKKIRNAQLAQYNFILVIGEKEKA 748 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V I+ R + + ++ E I + Sbjct: 749 SGTVNIRTRDNKVHGERTILETIERLQQLKQSR 781 >gi|227892604|ref|ZP_04010409.1| prolyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047] gi|227865589|gb|EEJ73010.1| prolyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047] Length = 565 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 108/265 (40%), Positives = 147/265 (55%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SHKLM+R G I Q + G+Y++LPLG + L AII +E Sbjct: 1 MRQSKFFMPTLKEAPSDAVAESHKLMIRGGYIRQVTAGVYAYLPLGYRVLRKAEAIIEQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MDRINVPEMIMPHLLPATLWQESGRYKKYGPEMFKLKDRHGRESLLGPTHEETFTEIIAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T + ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATRDQLDEQFDDQKNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R G+ P+ A+SG +GG S EF A GE + ++ D Sbjct: 181 YKRIFKRAGVSVHPVIADSGTMGGKNSTEFQAPAAVGEDTIAMNETGTYAANLEMAKSID 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 ++ T D + Sbjct: 241 TFKQEPEEAKELTKVATPDCDTIEK 265 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 64/192 (33%), Positives = 96/192 (50%), Gaps = 2/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A NE D + IEVGHIF GT Y+ M A F +GK Sbjct: 375 DFKVDEFADLRTANEGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTKTMGADFLDQNGKAK 434 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V MGSYGIG R+++A +E G+ WP +APF I ++ +K + + EK+ Sbjct: 435 PVIMGSYGIGVTRMLSAAVEQHLTEHGVAWPKEIAPFSIHIVQMKMNKDDQTELAEKLEK 494 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + S DV +DD E+ G +FA ADL+G P+++ VG K +D VE+K +MS Sbjct: 495 KFSDK-YDVLYDDRKERAGVKFADADLVGAPIRITVGKK-AADGIVEVKRPTDEKATEMS 552 Query: 431 LEEVINYASHRF 442 ++E+ + + Sbjct: 553 IDELDKFVNQEL 564 >gi|302346317|ref|YP_003814615.1| threonine--tRNA ligase [Prevotella melaninogenica ATCC 25845] gi|302150675|gb|ADK96936.1| threonine--tRNA ligase [Prevotella melaninogenica ATCC 25845] Length = 649 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 82/444 (18%), Positives = 153/444 (34%), Gaps = 39/444 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD ++ L + KG+ WLP G + + ++R Sbjct: 233 YLEMLEEAKKRDHRKIGKEMELFM-FSDRVGKGLPIWLPKGTQLRLRLQELLRRLLRPYN 291 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIK 123 E+ P + +L+V SG Y YGK+ + D+ + P + +I+ + Sbjct: 292 YQEVITPGIGGKNLYVTSGHYAHYGKDAFQPIHTPEEDEEYMLKPMNCPHHCEIYAHKPR 351 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP + FR E G+ R R F DA+ F P+ K + L Sbjct: 352 SYKDLPLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVR-PDQVKAEFENNIDIIL 410 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++F G + + D + + + D + + + Sbjct: 411 KVFKTFGFDNYEAQISLR--------------DPEDKEKYIGSDEVWEESEAAIKEACAE 456 Query: 243 ISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 LN+ VE A Y D + D++ ++ ++ F Sbjct: 457 KGLNARVELGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLPNRF--------KLE 505 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + G++ AV+ G +W + I + Sbjct: 506 YTAEDNSKKTPVMVHRAPFGSLERFTAVLIEHTAGHFPLW------LTPDQVAILPISEK 559 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D K+ A DD E+IG + +L P VIVG K ++ V ++ Sbjct: 560 YNDYARKVKAYFDAHDVRSIMDDRNEKIGRKIRDNELKRVPYMVIVGEKEAAEGLVSMRQ 619 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 + G + M++E ++ + Sbjct: 620 QGGGEQATMTMEAFAERINNEVAE 643 >gi|114659235|ref|XP_001144545.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic isoform 2 [Pan troglodytes] Length = 802 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 74/447 (16%), Positives = 150/447 (33%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + + + +E RD + L H S G +LP G + + IREE Sbjct: 385 KMMRDWEKFQEEAKNRDHRKIGKEQELF--FFHDLSPGSCFFLPRGAFIYNTLTDFIREE 442 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ E+ P + ++ LW SG + Y + M D P + +F Sbjct: 443 YHKRDFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIEKDT-FALKPMNCPGHCLMFAH 501 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R +P F + R+EL G+ R R F DA+ F + + Sbjct: 502 RPRSWREMPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQ-IEEEIKGCLR 560 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G F + T + + Sbjct: 561 FLQSVYSTFGFS------------------FQLNLSTRPENFLGEIEMWNEAEKQLQNSL 602 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D + A Y D+ K+ D++ + + ++ F +++L Sbjct: 603 MDFGEPWKMNPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRFNLTYV 655 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K V + +G++ + A++ + G WP ++P ++ +I + Sbjct: 656 SK--DGDDKKRPVIIHRAILGSVERMIAILS---ENYGGKWPFWLSPRQVMVIPVGP--- 707 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C ++ + + G D D + + A L + ++VG K D+ V + Sbjct: 708 TCEKYALQVSSEFFEEGFMADVDLDHNCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNV 767 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R I ++ + I+ + Sbjct: 768 RTRDNKIHGEILVTSAIDKLKNLKKTR 794 >gi|34482934|emb|CAE09933.1| THREONYL-TRNA SYNTHETASE [Wolinella succinogenes] Length = 536 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 75/441 (17%), Positives = 149/441 (33%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD ++ L G+ WLP G + + A++ E R Sbjct: 131 YLHQMEEAKKRDHRKVGTEMGLFI-FDEDVGAGLPIWLPAGARLRRRLEAMLTEAHIRRN 189 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +DLW SG Y +Y + M ++ P + ++ S ++SY Sbjct: 190 YEPVRGPEILKSDLWKISGHYQNYKENM-YFTKIDEVEYGIKPMNCVGHIKVYGSGVRSY 248 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP FY+ + R E G++R REF DA+ F + + + +I Sbjct: 249 RELPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCRPEQIKDEVVDIVH-FVDKI 307 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G T + + + + + Sbjct: 308 MSAFGFNYEMEI------------------STRPEKSIGDEAIWEKGTQALKEALEAQGL 349 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D++ + I++ + Sbjct: 350 QYGIDEGGGAFYGPKIDI---KITDAIGRKWQCGTVQIDMNLP--------ERFELAYTD 398 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + + +G+ A++ G+ + +AP ++++ I + + Sbjct: 399 ENNTPQRPVMIHRAILGSFERFVAILTEHFGGEFPFF---IAPTPVAIVPIG---EEQLE 452 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + L KVG D E + + + P+ V++G + V++ KV I+ R Sbjct: 453 YAKHLRLELQKVGVYAEIHDKNETLNKKIRTVEKQRVPMIVVLGEREVNEKKVAIRDRRE 512 Query: 424 GIREDMSLEEVINYASHRFSN 444 + ++ E I A + S Sbjct: 513 KRQYELGEAEFIQLAKEKMSE 533 >gi|126659940|ref|ZP_01731064.1| prolyl-tRNA synthetase [Cyanothece sp. CCY0110] gi|126618804|gb|EAZ89549.1| prolyl-tRNA synthetase [Cyanothece sp. CCY0110] Length = 598 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 109/235 (46%), Positives = 148/235 (62%), Gaps = 4/235 (1%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 L+E+P +AEI SHKL+LR G I + GIY++LPL + L V+ I+REE N G Sbjct: 1 MLFVTLREDPAEAEIPSHKLLLRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREEMNAAG 60 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 A E +P LQ ++LW ESGR+++Y K M L DR ++ + GPTHEEV+T + + I Sbjct: 61 AQECLLPQLQPSELWKESGRWETYTKAEGIMFSLIDRQERELGLGPTHEEVITTVAKDMI 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 +SYR LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF+ + SY+ M +Y Sbjct: 121 RSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFNENEASLQKSYDAMDQAYR 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 I R GL + A+SG IGG S EF++LA+ GE +V ++D + E Sbjct: 181 NIISRCGLAYRAVEADSGAIGGSASQEFMILAEAGEDEVLYTEDG-KYAANVEKA 234 Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats. Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 21/239 (8%) Query: 208 HEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 F+ AD + DF +P D T+ + + + Sbjct: 378 ENFVTGADEINYHIVGGNWNKDFKLPQLVCDI------------------RTAMIGDRAI 419 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 D SARGIEVGHIF GTKYS M ATF +G++ + MG YG+G R+ A Sbjct: 420 HDRS--QTLASARGIEVGHIFQLGTKYSEAMGATFTDENGEEKPIVMGCYGVGVSRLAQA 477 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 +E S+D GIIWP ++AP+ + +I D+ + E +Y L+K+G + DD E+ Sbjct: 478 AVEQSYDKDGIIWPVAIAPYHVIIIVPNIKDKNQIEVAENLYNELNKIGIETMLDDRDER 537 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 G +F ADL+G P +V+ G + + KVE+ R + +++ + ++ + + Sbjct: 538 AGVKFKDADLIGIPYRVVTG-RSLKAGKVEVVTRKSKESQEIEVTNLVETLHNWVEQAK 595 >gi|317508518|ref|ZP_07966185.1| prolyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974] gi|316253209|gb|EFV12612.1| prolyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974] Length = 606 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 100/264 (37%), Positives = 148/264 (56%), Gaps = 7/264 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+E+P DAE+ +HKL++R G + S G+++WLPLG KAL + ++REE Sbjct: 4 RLSELFLRTLREDPADAEVPNHKLLVRGGYFRRVSPGVFAWLPLGLKALRQIENVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ +P L + S R+ YG + RL DR + PTHEE+ + + Sbjct: 64 DGIGGQEILLPALAPRQPYETSNRWTEYGDNLFRLKDRKGGDYLLAPTHEELFALLVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+MKD+YSFD+ G+K +Y+ +Y Sbjct: 124 YTSYKDLPVILYQIQTKYRDEERPRAGILRGREFVMKDSYSFDVDEAGNKAAYHAHREAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPSENTDFD 240 RIF RLG+ + + A SG +GG S EF+ + GE C + + + T Sbjct: 184 QRIFDRLGISYVIVAATSGAMGGSASEEFLAESAIGEDTYVRCLESGYAANVEAVTTPVA 243 Query: 241 DIISLNSIVEQWTAPYAATSDVHN 264 + V+ AP A T D + Sbjct: 244 E------PVDFSGAPEAQTYDTGD 261 Score = 124 bits (310), Expect = 4e-26, Method: Composition-based stats. Identities = 65/180 (36%), Positives = 93/180 (51%), Gaps = 3/180 (1%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ K V+ARGIE+GH+F GTKY+ S G +GK + MG Sbjct: 399 GTIEAAEVREGDPSPDGAGKLVAARGIEIGHVFALGTKYTDAFSVDVLGENGKPARLIMG 458 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+V + E HD KG+ WP VAPF++ +++ A + Sbjct: 459 SYGIGVSRLVGVIAEQWHDEKGLRWPPQVAPFQVHVLSTGKGSAEAEAAEQYAAEL-EAH 517 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G V DD G +FA A+LLG P+ V+VG + S+ KVE+K R G + + V+ Sbjct: 518 GLRVLLDDRKASPGVKFADAELLGAPVIVVVGRDWASEGKVELKERFAGESGSVDADVVV 577 >gi|254778840|ref|YP_003056945.1| threonyl-tRNA synthetase [Helicobacter pylori B38] gi|254000751|emb|CAX28675.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS) [Helicobacter pylori B38] Length = 612 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 79/441 (17%), Positives = 151/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ WLP G + + ++ G Sbjct: 207 YLFQIEEAKKRDHRKLGVELGLFS-FDDEIGAGLPLWLPKGARLRKRIEDLLSRALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSTLHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + + + +I Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQSE-VSAILDFTHKI 383 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G + P E + + + Sbjct: 384 MQAFGFSYEM-ELSTRPAKSIGDDE-----------------VWEKATDALKEALKEHRI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 NYKIDEGGGAFYGPKIDI---KITDALRRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + Sbjct: 475 EYNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHHV 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + +A+ P+ +++G++ V + I+ R Sbjct: 529 FALKLKEELKKHDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 589 QAQYKMPLKEFLNMVESKMQE 609 >gi|254569696|ref|XP_002491958.1| Threonyl-tRNA synthetase, essential cytoplasmic protein [Pichia pastoris GS115] gi|238031755|emb|CAY69678.1| Threonyl-tRNA synthetase, essential cytoplasmic protein [Pichia pastoris GS115] gi|328351547|emb|CCA37946.1| threonyl-tRNA synthetase [Pichia pastoris CBS 7435] Length = 712 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 154/445 (34%), Gaps = 42/445 (9%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E RD + L ++ S G WLP G + + + ++R E + G Sbjct: 299 LKFLKEAAERDHRRIGREQELF--YFNEMSPGSCFWLPHGTRIYNTLTDLLRTEYRKRGY 356 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + ++ LW SG + +Y + M + P + +F+S +SYR Sbjct: 357 EEVITPNMYNSKLWETSGHWANYKENMFTFEVEKET-FGLKPMNCPGHCLMFKSRERSYR 415 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP+ + R+E G+ R R F DA+ F T + + + +F Sbjct: 416 ELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFC-TQDQIEDEISNIFDFLKF-- 472 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 I G EF + T + + + + Sbjct: 473 ----------------IYGLFGFEFKMELSTRPEKFVGDIETWNNAEAKLENALNKWGGK 516 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + A Y D+ + D+L + + ++ F ++ L G Sbjct: 517 WEVNPGDGAFYGPKIDIM---ISDALKRWHQCATVQLD----FQLPQRFELEYRTK-DGQ 568 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 D V + +G++ + A++ + WP ++P ++ ++ + D Sbjct: 569 DDLTRPVMIHRAILGSVERMTAILT---EHFAGKWPFWLSPRQVLIVPVGVK---YFDYA 622 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +++ L + D G + + L + IVG + +D V +++R Sbjct: 623 QQVQQELKGLDLYADVDLSGNTLQKKIRTGQLQRYNFIFIVGEQEQNDKSVNVRNRDIQE 682 Query: 426 RED----MSLEEVINYASHRFSNNR 446 ++ + L +VI R Sbjct: 683 LQNKNEAVPLVDVIPKLLQLRDERR 707 >gi|126277226|ref|XP_001373323.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 806 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 75/447 (16%), Positives = 151/447 (33%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD + L H S G +LP G + + I+EE Sbjct: 389 KMMKTWEKFQEEAKNRDHRKIGKEQELF--FFHDLSPGSCFFLPRGAFIYNTLMDFIKEE 446 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R E+ P + ++ LW SG + Y + M D + P + +F Sbjct: 447 YHRRNFTEVISPNVYNSKLWETSGHWQHYSENMFSF-DIEKETFALKPMNCPGHCLMFAH 505 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R +P + R+EL G+ R R F DA+ F + + Sbjct: 506 RPRSWREMPIRLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCRMEQIEEEM-KGCLE 564 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E A+ Sbjct: 565 FLQSVYTVFGFSFQLN-LSTRPENFLGEIEIWNQAE-----------------EQLQNSL 606 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + A Y D+ K+ D++ + + ++ F +++L Sbjct: 607 KEFGKPWKLNPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRFNLTYV 659 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + +D K V + +G++ + A++ + G WP ++P ++ +I + Sbjct: 660 SK--DSDDKTRPVIIHRAILGSVERMIAILS---ENYGGKWPFWLSPCQVMVIPVGP--- 711 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C + +I + G D D + + A L + ++VG K ++ V + Sbjct: 712 TCEEYALQISKEFFEAGFMADVDLDQSCTLNKKIRNAQLAQYNFILVVGEKEKLNNAVNV 771 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R I + S+ I+ + Sbjct: 772 RTRDNKIHGEASVVSTISKLKKLKESR 798 >gi|77735697|ref|NP_001029542.1| threonyl-tRNA synthetase, cytoplasmic [Bos taurus] gi|110287979|sp|Q3ZBV8|SYTC_BOVIN RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|73586669|gb|AAI03083.1| Threonyl-tRNA synthetase [Bos taurus] gi|296475710|gb|DAA17825.1| threonyl-tRNA synthetase [Bos taurus] Length = 723 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 76/447 (17%), Positives = 151/447 (33%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 306 KMLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNTLIEFIRSE 363 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LWV SG ++ Y + M + P + +F Sbjct: 364 YRKRGFQEVVTPNIYNSRLWVTSGHWEHYSENMFSFEVEKEL-FALKPMNCPGHCLMFDH 422 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 423 RPRSWRELPLRVADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 481 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E A+ Sbjct: 482 FLRTVYSIFGFSFKLN-LSTRPEKFLGDIEVWNQAEK-----------------QLENSL 523 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 +D + A Y D+ ++ D++ + + ++ F +++L Sbjct: 524 NDFGEKWELNPGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRFNLTFV 576 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 577 SH--DGDDKKKPVIIHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP--- 628 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C + +K+ + V D D G + + A L + ++VG K + V I Sbjct: 629 TCDEYAQKVRQQFHNAKFMVDIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKTSGTVNI 688 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R + + ++ E I + Sbjct: 689 RTRDNKVHGERTISETIERLQQLKHSR 715 >gi|15611183|ref|NP_222834.1| threonyl-tRNA synthetase [Helicobacter pylori J99] gi|8928389|sp|Q9ZMV3|SYT_HELPJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|4154621|gb|AAD05692.1| THREONYL-TRNA SYNTHETASE [Helicobacter pylori J99] Length = 612 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 151/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ WLP G + + ++ + G Sbjct: 207 YLFQIEEAKKRDHRKLGVELGLFS-FDDEIGAGLPLWLPKGARLRKRIEDLLSQALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + + + +I Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQSE-VSAILDFTHKI 383 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G + P + + + Sbjct: 384 MQAFGFSYEM-ELSTRPAKS-----------------IGDDKVWEKATNALKEALKEHRI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 DYKIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + Sbjct: 475 EYNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHHV 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + +A+ P+ +++G++ V + I+ R Sbjct: 529 FALKLKEALKKCDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 589 QAQYKMPLKEFLNMVESKMQE 609 >gi|317179928|dbj|BAJ57714.1| threonyl-tRNA synthetase [Helicobacter pylori F32] Length = 612 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 77/441 (17%), Positives = 151/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ WLP G + + ++ + G Sbjct: 207 YLFQIEEAKKRDHRKLGVELGLFS-FDDEIGAGLPLWLPKGARLRKRIEDLLSKALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + + + Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQSE--VSAILDFTHK 382 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + M + P + + + Sbjct: 383 IMQAFDFNYEMELSTRPAKS-----------------IGDDKVWEKATNALKEALKEHRI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 DYKIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + Sbjct: 475 ERNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHHV 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + +A+ P+ +++G++ V + I+ R Sbjct: 529 FALKLKEALKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVESEILSIRDREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 589 QAQYKMPLKEFLNMVESKMQE 609 >gi|300934571|ref|ZP_07149827.1| threonyl-tRNA synthetase [Corynebacterium resistens DSM 45100] Length = 706 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 61/457 (13%), Positives = 134/457 (29%), Gaps = 50/457 (10%) Query: 5 KYFLPIL-QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + + +L + RD +L L + + G + P G + R Sbjct: 271 ESYQEMLAEAEKRDHRRLGAELDLFS-FPDEIGSGFPVFHPNGGIVRLEMEEHSRRRHIE 329 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND------------KAMIYGPTHE 111 +G ++ P + DL+ +SG D Y + M + + P + Sbjct: 330 SGYSFVNTPHITKGDLFQKSGHLDFYAEGMFPPMQLDGEVDAEGNVTKQAQDYYAKPMNC 389 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF S +SYR LP ++ +R E G+ R+R F DA+ + T + Sbjct: 390 PMHNLIFASRGRSYRELPLRLFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYC-TEDQL 448 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + + + + GL + + + S + + Sbjct: 449 EQELTTVLEFIISLLRDYGLDDFYLELST----------------KDPNKFVGSDEIWER 492 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + A Y + + D++ ++S ++ F Sbjct: 493 STEILQRVATNSGLELVPDPAGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FNL 545 Query: 291 GTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 ++ + + DG + G++ V+ + G W I Sbjct: 546 PERF----NLEYTAPDGSKQRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVVGI 601 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 + + + + + L K G D +++ + P ++VG + Sbjct: 602 PVA------DEFNEYLDSVASDLRKRGIRAEVDTSDDRMQKKIRTHTTGKVPFMLLVGGR 655 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 V V + + + + + R Sbjct: 656 DVEADAVSFRFLDGSQVNGVPRDRAVELIAQWIGERR 692 >gi|213692035|ref|YP_002322621.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254783509|sp|B7GR13|SYT_BIFLI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|213523496|gb|ACJ52243.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320458147|dbj|BAJ68768.1| threonyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 677 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 59/461 (12%), Positives = 130/461 (28%), Gaps = 54/461 (11%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L+E RD ++ L + + G+ + P G ++ + RE + Sbjct: 242 KAYQTRLEEAAKRDHRKLGAEMDLFS-FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRK 300 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHE 111 + P + L+ SG Y M + P + Sbjct: 301 HHYSFVQTPHITKGGLYETSGHLHWYKDGMYPAMHLDEEYDADGNVTKPGFDYYLKPMNC 360 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 361 PMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMK 420 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L + GL + + + S + + Sbjct: 421 DEL-TSLLTFVLNLLKDFGLSDFYLELST----------------KDPDKYVGSDEIWEE 463 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + A Y + + D++ +VS ++ F Sbjct: 464 ATRTLREVAEASHLDLVADPGGAAFYGPKI---SVQARDAIGRTWQVSTIQLD----FNL 516 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 ++ + DG + R + IE + + + Sbjct: 517 PERF----QLEYIAKDGT------HQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAP 566 Query: 351 LINIKAHDQVCRDACEKIY---ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + + V + + L D ++ G + A P +IVG Sbjct: 567 VQVLGV--PVADEFAPHLAGFVKSLEDEMVRCEIDYSDDRFGKKIRNASKSKVPFILIVG 624 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 + ++++ V + R + +++ + V Sbjct: 625 EEDMNNNAVSFRFRDGSQLNGVPVDKAREQILAVIAKRVQV 665 >gi|322689774|ref|YP_004209508.1| prolyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F] gi|322691722|ref|YP_004221292.1| prolyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217] gi|320456578|dbj|BAJ67200.1| prolyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217] gi|320461110|dbj|BAJ71730.1| prolyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F] Length = 614 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 107/284 (37%), Positives = 156/284 (54%), Gaps = 2/284 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DA++ S KL+ R G I + + GI++WLPLG + L+ + AIIREE Sbjct: 17 RMSTMFLRTLREDPADADVDSAKLLQRAGYIRKAAPGIWTWLPLGLRVLNKIEAIIREEI 76 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+ P L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 77 NGIGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDM 136 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG + +Y +Y Sbjct: 137 YSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFVMKDAYSFTIDEEGMRKAYYDERGAY 196 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF-- 239 RIF RL LK +P+ A SGP+GG S EF+ GE + + + + +T Sbjct: 197 ERIFQRLDLKYVPVFAMSGPMGGSASEEFLAPMPIGEDTFALAPSGKAWNVEALSTPELP 256 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 + S + P A T D E+ P + + Sbjct: 257 EIDASTTPAASKEATPDAKTIDNMIERANADHPRTDGREWQASD 300 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 4/191 (2%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLP 297 ++ + ++V + + D P+ RG+E+G +F G KYS Sbjct: 406 ENEVDYYNLVYGRDFKVDGVVEAVEVRHGDMSPDGSGPLSFERGVEIGQVFQLGLKYSKA 465 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + +GK V MG YGIG RV+A + E+ HD G+ W SV + Sbjct: 466 LDLKVLDQNGKAVPVWMGCYGIGVSRVLACIAETHHDEAGLAW-PSVIAPAAVHVVATGK 524 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D V + EK+ A L G +V +DD + G +F A+L+G PL +VG +V+D + Sbjct: 525 DAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFKDAELIGVPLVAVVGRDYVNDGTI 584 Query: 417 EIKHRLTGIRE 427 E++ R + Sbjct: 585 ELRDRNGENKV 595 >gi|320105902|ref|YP_004181492.1| prolyl-tRNA synthetase [Terriglobus saanensis SP1PR4] gi|319924423|gb|ADV81498.1| prolyl-tRNA synthetase [Terriglobus saanensis SP1PR4] Length = 613 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 108/236 (45%), Positives = 146/236 (61%), Gaps = 2/236 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R SK F+P L+E P DA +ASH+++LR G + Q G+YS+L L ++++ + AI+REE Sbjct: 30 RWSKLFIPTLREAPADAVVASHQILLRAGYVRQLGAGLYSYLFLATRSINKIVAIVREEM 89 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 +R G EM +P L A++W ESGR+ G M RL DR + G THEEVMT I RS Sbjct: 90 DRIG-QEMYLPALNPAEVWQESGRWTGMGDNMFRLKDRKGADLCLGMTHEEVMTSIARSE 148 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 I+SY+ LP +YQIQ KFRDE RP+ G++R R+F MKD+YSFDL EG SY +Y Sbjct: 149 IRSYKQLPQIWYQIQTKFRDEPRPKSGLLRVRQFTMKDSYSFDLNEEGLDVSYKLHDEAY 208 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 IF R GL + + A+SG +GG S EF+V + GE + S D + E Sbjct: 209 RCIFTRCGLSFVAVEADSGAMGGSQSQEFMVYTEAGEDLIASSPDGQ-YAANIEKA 263 Score = 136 bits (343), Expect = 6e-30, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 87/194 (44%), Gaps = 9/194 (4%) Query: 258 ATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 A NE D + + +E+GHIF G KY+ M A +GK+ MG Y Sbjct: 420 ADIRNINEGEPDPITGQPLRLGKAVEIGHIFKLGYKYTESMGARVLDQNGKETMPIMGCY 479 Query: 318 GIGAMRVVAAVIESSHDGK--------GIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 GIG R++ A +E S P S+APF++ + K D +A E I Sbjct: 480 GIGIERILTAAMERSAASMGLSDRGDIRYALPASIAPFQVIVTVTKQSDATLAEAGETIA 539 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 L G DV DD + G +F ADL+G P +V VG K + D VE+ RLTG + Sbjct: 540 KALDSAGFDVLLDDRDQSAGVKFKDADLIGVPYRVNVGKK-LVDGLVELVDRLTGNTIEC 598 Query: 430 SLEEVINYASHRFS 443 ++ EV+ Sbjct: 599 AVNEVVPQLQAAIK 612 >gi|116491012|ref|YP_810556.1| prolyl-tRNA synthetase [Oenococcus oeni PSU-1] gi|122276806|sp|Q04F81|SYP_OENOB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116091737|gb|ABJ56891.1| Prolyl-tRNA synthetase [Oenococcus oeni PSU-1] Length = 570 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 108/250 (43%), Positives = 152/250 (60%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +E P +A++ SH MLR G I Q + GIY++LPL + ++ + +IIREE Sbjct: 1 MKQSKIFIPTEKEVPAEAQVKSHIFMLRAGFIRQVAGGIYAYLPLANRIINKIESIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR A EM +P + A+LW ESGR+ +YG +M +L DR+D+ I PTHEE T I Sbjct: 61 MNRIDANEMLMPEMIPAELWKESGRFYTYGPQMYQLKDRHDREFIMAPTHEETFTKIISD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDELRP+ G++R REF+MKDAYSF +G +Y+ + + Sbjct: 121 EIKSYKKLPLILYQIQQKFRDELRPKNGLLRGREFIMKDAYSFSSDQKGLDDAYDLIESA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GL + A+SG +GG S EF +A TGE + S +F Sbjct: 181 YKRIFDRVGLDYREIIADSGSMGGKDSAEFQAIAATGEDIIAYSNSGKYAANIEMAEEFF 240 Query: 241 DIISLNSIVE 250 + + + Sbjct: 241 EKKIPDEDKK 250 Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 61/175 (34%), Positives = 98/175 (56%), Gaps = 1/175 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 + K V +GIE+GHIF GT Y+ M + GK + MG YGIG R+++A+ E Sbjct: 397 GKGKLVFTKGIEIGHIFKLGTFYTSKMGGQIQNEKGKLSDIIMGCYGIGISRLLSAIAEQ 456 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 S+D KG IWP +VAPF + LI + ++ + ++I L + G +V DD E+ G + Sbjct: 457 SNDPKGFIWPKAVAPFNVHLITMNTKNESQVNLTKQIDKNLQEAGFEVLVDDRKERPGVK 516 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 FA +DL+G P++V+VG + VE+K R D+S + +I + + + + Sbjct: 517 FADSDLIGIPIRVVVGRQ-ADQQIVEVKARGQESTNDVSTDNLIAFLKDKLNELK 570 >gi|167005199|ref|ZP_02270957.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176] Length = 568 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 112/271 (41%), Positives = 158/271 (58%), Gaps = 4/271 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 1 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + GPTHEE M + ++ Sbjct: 61 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKKNEFVLGPTHEEAMLSLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 121 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ E Sbjct: 181 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICENC-DYAANVEAA--- 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 E+ A YA+ N K DSL Sbjct: 237 KRAKKTCQDERPEANYASKFHTPNIKTIDSL 267 Score = 157 bits (398), Expect = 3e-36, Method: Composition-based stats. Identities = 64/223 (28%), Positives = 110/223 (49%), Gaps = 6/223 (2%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS---DVHNEKLFDSLPEN--KRVSA 279 ++DF + +E + + D+ K D + K + Sbjct: 346 DFYIDFELENEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLIEVKEGDCCVKCGAKLKQS 405 Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE++HD KG I Sbjct: 406 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEANHDEKGCI 465 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W ++APF + +I D+ + K+Y L+ +G +V DD E+ G + +L+G Sbjct: 466 WNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMNDFELMG 525 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 FP +++G K + ++++E+ R ++E + +E++ + Sbjct: 526 FPYALVIG-KGLENNEIELIQREDLVKELIKTDELMEILKKKV 567 >gi|283783528|ref|YP_003374282.1| proline--tRNA ligase [Gardnerella vaginalis 409-05] gi|283441181|gb|ADB13647.1| proline--tRNA ligase [Gardnerella vaginalis 409-05] Length = 610 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 106/284 (37%), Positives = 155/284 (54%), Gaps = 2/284 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ FL L+E+P DA++ S KLM R G I + + G+++WLPLG K L+ V AIIR+E Sbjct: 7 RMSQLFLRTLREDPADADVTSAKLMQRAGYIRKSAPGVWTWLPLGLKVLNKVQAIIRDEI 66 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+ P L + + + R++ YG + RL DR+ + PTHEEV T + + Sbjct: 67 NGIGAQEVHFPALLPREPYEATNRWEEYGDNIFRLKDRHQADYLLAPTHEEVFTLLVKDM 126 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T YQIQ K+RDE RPR G++R REF+M+D YSF + +G K +Y + +Y Sbjct: 127 YSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMQDGYSFSIDEDGLKSAYVEERAAY 186 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--DF 239 RIF RLG+K + + A SGP+GG S EF+ GE + + + + T Sbjct: 187 ARIFDRLGIKYVIVHAVSGPMGGSDSEEFLAPMPIGEDTFALAPSGKAWNVEALTTPEMQ 246 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 D S + P A T + + D P + + Sbjct: 247 DVDYSATPAAQSLETPDAKTIEALVKVSNDLHPRKDGREWQADD 290 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 4/208 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLP 297 +D + + V + + D P+ RG+E+G +F G KYS Sbjct: 401 EDGKHVYNAVYGRDFEADGVVEAAQVRDGDMSPDGSGPLSFERGVEIGQVFQLGLKYSKA 460 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + + +GK V MG YGIG RV+A + E+ HD G+ WP ++AP ++ ++ Sbjct: 461 LGLSVLNENGKAVPVWMGCYGIGVSRVIACLAETHHDDAGLAWPMAIAPAQVHVVATG-K 519 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 DQV DA EK+ LSK G +V +DD G +F A+L+G PL + G V++ + Sbjct: 520 DQVAFDAAEKVVEELSKQGIEVIFDDRPKVSPGVKFKDAELVGVPLIAVAGRDTVNNGTI 579 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSN 444 EI+ R E + ++E R S Sbjct: 580 EIRDRNGSNVEAVPVDEAAARIVERVSE 607 >gi|311064400|ref|YP_003971125.1| threonyl-tRNA synthetase [Bifidobacterium bifidum PRL2010] gi|310866719|gb|ADP36088.1| ThrS Threonyl-tRNA synthetase [Bifidobacterium bifidum PRL2010] Length = 676 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 60/461 (13%), Positives = 129/461 (27%), Gaps = 54/461 (11%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L+E RD ++ L + + G+ + P G ++ + RE + Sbjct: 242 KAYQTRLEEAAKRDHRKLGAEMDLFS-FPEEIGPGLAVFHPKGAAVINAMEDYSREMHRK 300 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHE 111 + P + L+ SG Y M + P + Sbjct: 301 HHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEYDADGNITKPGADYYLKPMNC 360 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 361 PMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMK 420 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L + GL + + + S + + Sbjct: 421 DEL-TSLLTFVLNLLKDFGLSDFYLELST----------------KDPDKYVGSDEIWEE 463 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + A Y + + D++ +VS ++ F Sbjct: 464 ATRTLREVAEASHLDLVADPGGAAFYGPKI---SVQARDAIGRTWQVSTIQLD----FNL 516 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 ++ + DG + R + IE + + + Sbjct: 517 PERF----QLEYIAKDGT------HQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAP 566 Query: 351 LINIKAHDQVCRDACEKIY---ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + + V + + L D ++ G + A P +IVG Sbjct: 567 VQVLGV--PVADEFAPHLAGFVKSLEDEMVRCEIDYSDDRFGKKIRNASKSKVPFILIVG 624 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 + ++++ V + R + ++E V Sbjct: 625 EEDMNNNAVSFRFRDGSQLNGVPVDEAREKILAVIKMRAQV 665 >gi|217031884|ref|ZP_03437386.1| hypothetical protein HPB128_3g3 [Helicobacter pylori B128] gi|298736935|ref|YP_003729465.1| threonyl-tRNA synthetase [Helicobacter pylori B8] gi|216946353|gb|EEC24958.1| hypothetical protein HPB128_3g3 [Helicobacter pylori B128] gi|298356129|emb|CBI67001.1| threonyl-tRNA synthetase [Helicobacter pylori B8] Length = 612 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 79/441 (17%), Positives = 152/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ WLP G + + ++ + G Sbjct: 207 YLFQIEEAKKRDHRKLGVELGLFS-FDDEIGAGLPLWLPKGARLRKRIEDLLSQALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + + + Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQSE--VSAILDFTHK 382 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + S M + P E + + + Sbjct: 383 IMKAFNFSYEMELSTRPTKSIGDDE-----------------VWEKATSALKEALKEHRI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 DYKIDEGGGAFYGPKIDI---KITDALRRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + Sbjct: 475 EHNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHHV 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + +A+ P+ +++G++ V + I+ R Sbjct: 529 FALKLKEELKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 589 QDQYKMPLKEFLNMVESKMQE 609 >gi|113475159|ref|YP_721220.1| threonyl-tRNA synthetase [Trichodesmium erythraeum IMS101] gi|110166207|gb|ABG50747.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Trichodesmium erythraeum IMS101] Length = 608 Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats. Identities = 70/450 (15%), Positives = 156/450 (34%), Gaps = 39/450 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + R+ +L L G+ W P G +++ +++EQ Sbjct: 188 LTEYKRRKEEALKRNHRKLGKELGLFI-FSDLVGPGLPLWTPKGTMLKNSLKDFLQQEQL 246 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------DRNDKAMIYGPTHEEVMTD 116 + G + + P + DL+ SG + Y ++M + + ++ + P + Sbjct: 247 KRGYLPVDTPHIARIDLFKTSGHWQKYKEDMFPMMAEDEQAEALEQGFVLKPMNCPFHIQ 306 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 I+++ ++SYR LP + +R E G + +D +TPE + Sbjct: 307 IYKNELRSYRELPIRLAEFGTVYRHEKSGELGGLTRVRGFTQDDSHLFVTPEQLDAEFLS 366 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + L +F L L++ R D + S + + + Sbjct: 367 VVDLTLFVFKSLQLQNFKARLS--------------FRDPNLDKYIGSDEAWEKAEGAIR 412 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + + + A Y D D+L ++ ++ Sbjct: 413 RAVEKMGMDHFEGIGEAAFYGPKLDFI---FQDALEREWQLGTVQVDYNLP--------E 461 Query: 297 PMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 + DG + G++ + ++ + +P +AP ++ L+ + Sbjct: 462 RFDLEYVAEDGTRKRPVMIHRAPFGSLERLIGILI---EEYAGDFPVWLAPTQVKLLPVN 518 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 +++ ++ +VG D E++G A+ P+ +VG+K V + Sbjct: 519 ---SEFWPFAQEVAEQMLQVGIRAEVDMSNERLGKLIRNAEKAKIPIMAVVGAKEVESNS 575 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRFSNN 445 + I+ R TG + + EVI + +N Sbjct: 576 LSIRTRSTGELGSIPVMEVIQKMTKAIANY 605 >gi|291456785|ref|ZP_06596175.1| threonine--tRNA ligase [Bifidobacterium breve DSM 20213] gi|291382062|gb|EFE89580.1| threonine--tRNA ligase [Bifidobacterium breve DSM 20213] Length = 677 Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats. Identities = 59/461 (12%), Positives = 130/461 (28%), Gaps = 54/461 (11%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L+E RD ++ L + + G+ + P G ++ + RE + Sbjct: 242 KAYQTRLEEAAKRDHRKLGAEMDLFS-FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRK 300 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHE 111 + P + L+ SG Y M + P + Sbjct: 301 HHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEYDEDGNVTKPGFDYYLKPMNC 360 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 361 PMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMK 420 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L + GL + + + S + + Sbjct: 421 DEL-TSLLTFVLNLLKDFGLSDFYLELST----------------KDPDKYVGSDEIWEE 463 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + A Y + + D++ +VS ++ F Sbjct: 464 ATRTLREVAEASHLDLVADPGGAAFYGPKI---SVQARDAIGRTWQVSTIQLD----FNL 516 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 ++ + DG + R + IE + + + Sbjct: 517 PERF----QLEYIAKDGT------HQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAP 566 Query: 351 LINIKAHDQVCRDACEKIY---ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + + V + + L D ++ G + A P +IVG Sbjct: 567 VQVLGV--PVADEFAPHLAGFVKSLEDEMVRCEIDYSDDRFGKKIRNASKSKVPFILIVG 624 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 + ++++ V + R + +++ + V Sbjct: 625 EEDMNNNAVSFRFRDGSQLNGVPVDKAREQILAVIAKRVQV 665 >gi|254382091|ref|ZP_04997453.1| prolyl-tRNA synthetase 1 [Streptomyces sp. Mg1] gi|194340998|gb|EDX21964.1| prolyl-tRNA synthetase 1 [Streptomyces sp. Mg1] Length = 565 Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats. Identities = 108/301 (35%), Positives = 157/301 (52%), Gaps = 17/301 (5%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ L+E+P DAE SHKL++R G + + S G+++WLPLG++ LDNV+ ++REE Sbjct: 8 RMSRLMAKTLREDPADAETLSHKLLVRAGYVRRSSAGVWTWLPLGKRVLDNVSRVVREEM 67 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + + SGR+ YG + RL DR + GPTHEE+ T + + Sbjct: 68 DAIGAQEVLLPALLPKEPYEVSGRWSEYGDLLFRLKDRKGADYLLGPTHEEIFTLVVKDQ 127 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR GV+R REF MKD+YSFD++ EG SY +Y Sbjct: 128 CTSYKDLPVMLYQIQTKYRDEARPRSGVLRGREFQMKDSYSFDVSDEGLAESYALHRAAY 187 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP---------- 231 RIF RLGL + A SG +GG S EF+ A GE Sbjct: 188 RRIFERLGLDHRIVSAVSGAMGGSASEEFLAPAAAGEDTFVDCPSCDYAANTEAVTFAAP 247 Query: 232 -------IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV 284 P++ D ++ ++ P +AT K+ + R +++ Sbjct: 248 AVDGAGHAPAQEIPTPDTPTIEALAAHLGVPASATLKNLLVKVDGEIVAVGVPGDREVDL 307 Query: 285 G 285 G Sbjct: 308 G 308 Score = 110 bits (274), Expect = 6e-22, Method: Composition-based stats. Identities = 59/182 (32%), Positives = 85/182 (46%), Gaps = 6/182 (3%) Query: 261 DVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 DV + D P R IE+GHIF G KY+ G +GK V MGSYG Sbjct: 387 DVVVVEAGDPCPSCGAGLRLDRAIEIGHIFQLGRKYADAFGLDVLGREGKPVRVTMGSYG 446 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R VAA+ E + D +G+ WP VAP + ++ + G Sbjct: 447 IGVSRAVAALAEQTADERGLCWPAEVAPADVHVVAAGKAVPLALAESAAAALS--ASGLR 504 Query: 379 VFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 V DD G G + A+L+G P ++ G + D VE++HR TG RE+++L+E + Sbjct: 505 VLLDDRAGLSPGVKLTDAELIGVPWILVAGRRS-GDGVVELQHRPTGTREELTLDEALAR 563 Query: 438 AS 439 + Sbjct: 564 LT 565 >gi|71892130|ref|YP_277862.1| threonyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796236|gb|AAZ40987.1| threonyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 408 Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats. Identities = 73/434 (16%), Positives = 137/434 (31%), Gaps = 40/434 (9%) Query: 14 NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 D + +L L + + G+ W G L + IIR + E+ PT Sbjct: 6 KKNDHRNLAKQLHLY--HTQKDAPGMVFWHQNGWILLQELKKIIRTQLKEYKYQEVKSPT 63 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 + + LW ++G +D+Y E + P + IF IKSY++LP+ Sbjct: 64 MINHTLWKKTGHWDNY-HEHIFTTSSESHEYCIKPMNCPGHIQIFNQGIKSYKDLPYRIA 122 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 + R+E G+MR+REF D + F + N I++ G K+ Sbjct: 123 EFGNCHRNEPSGSLHGLMRTREFTQDDGHIFCTKTQIFDEL-NHCIKMMYDIYNTFGFKT 181 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 I ++ + P + D +T Sbjct: 182 ILVKLSTRPAKR-----------------IGTDSIWDTAEQHLSTVLQHNNISFQYQPND 224 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH-Y 311 A Y + L DSL + ++ +A + Sbjct: 225 GAFYGPKIEF---ALLDSLDRTWQCGTIQLDFSLPNLL--------NARYIDRHNSRVVP 273 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 V + +G+M +I + G W +++ + I + Sbjct: 274 VMIHRAILGSMERFIGLITEEYAGFFPTWLAPTQVVLMNVT------DQQSEYVSVIEKK 327 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L D E+IG + L P +I G+K ++ + V I+ ++ ++ Sbjct: 328 LINKKIRTKVDLRNEKIGFKIRYYTLQRIPYMLICGNKEMNQNTVAIRTYRGQTLKNCNI 387 Query: 432 EEVINYASHRFSNN 445 + I ++ Sbjct: 388 DIFIKKLLCEINSY 401 >gi|297663737|ref|XP_002810324.1| PREDICTED: LOW QUALITY PROTEIN: threonyl-tRNA synthetase, mitochondrial-like [Pongo abelii] Length = 719 Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats. Identities = 86/457 (18%), Positives = 146/457 (31%), Gaps = 57/457 (12%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + RD + L H+ S G +LP G + + + A IR E R G E+ Sbjct: 295 REEAELRDHRRIGKEQELF--FFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEV 352 Query: 70 SVPTLQSADLWVESGRYDSYGKEML----------------RLADRNDKAMIYGPTHEEV 113 PTL S LW +SG ++ Y ++M + P + Sbjct: 353 KTPTLFSTKLWKQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPA 412 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 +F +S+R LP R E G+ R R F DA+ F T + Sbjct: 413 HCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAE 472 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 ++ LG F + T + D Sbjct: 473 -IQSCLDFLRSVYAVLGFS------------------FHLALSTRPSGFLGDPCLWDQAE 513 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y DVH L D+L + ++ F Sbjct: 514 QVLKQALKEFGEPWDLNSGDGAFYGPKIDVH---LHDALGRPHQCGTIQLD----FQLPL 566 Query: 293 KYSLPMSATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 ++ +KG G + V + +G++ + V+ + G WP ++PF++ + Sbjct: 567 RFD----LQYKGQAGALERPVLIHRAVLGSVERLLGVLA---ESCGGKWPLWLSPFQVVV 619 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKF 410 I + + + ++ L G D D G + + A L + Q +VG K Sbjct: 620 IPVGTEQE---EYAKEAQQSLRAAGLVSDLDADSGLTLSRRVRRAQLAHYNFQFVVGQKE 676 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 S V I+ R + L E + + P Sbjct: 677 QSKRTVNIRTRDNRRLGEWDLPEAVQRLVELQNTRVP 713 >gi|219849385|ref|YP_002463818.1| threonyl-tRNA synthetase [Chloroflexus aggregans DSM 9485] gi|219543644|gb|ACL25382.1| threonyl-tRNA synthetase [Chloroflexus aggregans DSM 9485] Length = 594 Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats. Identities = 76/446 (17%), Positives = 140/446 (31%), Gaps = 39/446 (8%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + +L L+E+ R D +L L G+ + P G+ + +RE Q R Sbjct: 182 EAYLHRLEESRRRDHRRLGKELGLF-FFSDDIGPGLPIFSPKGEIIRHEMEKFVREVQTR 240 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-DRNDKAMIYGPTHEE-VMTDIFRSH 121 G + + L+ +SG YD+Y M + D P + MT + Sbjct: 241 YGYQHVWTGNVVKEQLYRKSGHYDNYRDSMFPPMVESEDLIFRLKPMNCPSHMTLYNQLG 300 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR+LP F + +R E G+ R R D + F + + ++ Sbjct: 301 VISYRDLPLRFAEFATLYRYEDSGALSGLTRVRALTQDDCHIFCRPDQIQEE-FSLALQV 359 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + +R E + + + + + Sbjct: 360 IREVLGTYKFTDYKVRLSLRG---------------KEGKYVQDDEKWELATAALRAALE 404 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 E A Y +D D L ++S ++ G Sbjct: 405 ANGVEYFEAEGEAAFYGPKADFL---ARDVLGREWQLSTIQVDFIQPARLG--------C 453 Query: 301 TFKGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G D K H + G ++ + +P +AP + +I I Sbjct: 454 EYIGEDDKPHTPVVLHRAVTGTTERFMGILI---EHYAGAFPLWLAPVQAVIIPITDK-- 508 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + K+ RL G V D+ +++ + A L P +I+G++ S V ++ Sbjct: 509 -QMEYARKVRQRLFAAGLRVELDENRDRMQGKIRRAQLQKIPYMLIIGAREESADAVAVR 567 Query: 420 HRLTGIREDMSLEEVINYASHRFSNN 445 R M +E + A Sbjct: 568 TRAGDDLGAMPVEAFLARALEEIRTR 593 >gi|301768134|ref|XP_002919483.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Ailuropoda melanoleuca] Length = 723 Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats. Identities = 73/447 (16%), Positives = 151/447 (33%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 306 KMLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNTLIEFIRSE 363 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + P + +F Sbjct: 364 YRKRGFQEVVSPNIYNSRLWMTSGHWQHYSENMFSFEVEKEL-FALKPMNCPGHCLMFDH 422 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 423 RPRSWRELPLRIADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAIEQIEDE-IKGCLD 481 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 +++ G + P E A+ Sbjct: 482 FLRTVYNVFGFSFKLN-LSTRPEKFLGDIEVWNQAEK-----------------QLENSL 523 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F +++L Sbjct: 524 NEFGEKWELNPGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRFNLTFV 576 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 577 SH--DGDDKKRPVIVHRAILGSVERMIAILT---ENFGGKWPFWLSPRQVMVVPVGP--- 628 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C + +K+ + V D D G + + A L + +++G K + V I Sbjct: 629 TCDEYAQKVRQQFHDAKFTVDIDLDPGCTLNKKIRNAQLAQYNFILVIGEKEKASGTVNI 688 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R + + ++ E I + Sbjct: 689 RTRDNKVHGERTISETIERLQQLKQSR 715 >gi|88607718|ref|YP_505783.1| threonyl-tRNA synthetase [Anaplasma phagocytophilum HZ] gi|88598781|gb|ABD44251.1| threonyl-tRNA synthetase [Anaplasma phagocytophilum HZ] Length = 615 Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats. Identities = 82/446 (18%), Positives = 164/446 (36%), Gaps = 41/446 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + +L+E R D + L I + G W G + +R++ G Sbjct: 208 YFKLLEEAERRDHRKIAKDLEWF--HIQNEALGQVFWHDKGWTLYRTIEEYLRKKLRENG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW +SG ++ + + M ++D+N + + P + IF+S +SY Sbjct: 266 YTEIKTPIMLDRKLWEKSGHWEKFRENMFIVSDQNSQELAIKPMNCPCHVQIFKSKTRSY 325 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 ++LP + + R+E +G+MR R F DA+ F + K + + + Sbjct: 326 KDLPIRMAEFGMCHRNEPSGSLYGLMRVRGFTQDDAHIFCTHDQIRDE-VRKFYKLLVEV 384 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 ++ G K+I ++ P S E +A+ DD Sbjct: 385 YNDFGFKNIDVKLSDRPEERIGSDEMWDMAERSLMD-----------------SMDDEGV 427 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 +I + A Y + L D+L N + ++ G A + G Sbjct: 428 KYTINKGDGAFYGPKLEF---TLKDALGRNWQCGTIQLDFVLPSRLG--------AYYVG 476 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 +DG H+ + +G + ++ + P +AP ++ ++ + ++ + Sbjct: 477 SDGNKHHPVMIHRAILGTLERFIGILI---ESYAGNLPAWLAPVQLEILTVNSN---ALE 530 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + + V + E IG + + P+ +VGS +D V ++H T Sbjct: 531 YATTLANKAREHNIRVELNSGEESIGQKIRKSIFNKIPVLWVVGSAETADCTVSVRHYGT 590 Query: 424 GIREDMSLEEVINYASHRFSNNRPVL 449 M ++ + S R VL Sbjct: 591 SNACSMEADKALKTLVTYVS-IRQVL 615 >gi|317969639|ref|ZP_07971029.1| prolyl-tRNA synthetase [Synechococcus sp. CB0205] Length = 633 Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats. Identities = 108/225 (48%), Positives = 148/225 (65%), Gaps = 3/225 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L+++P +AEIASHKL+LR G I + GIY++LPL + L V+A++REE Sbjct: 26 MRVSRLMLVTLRDDPAEAEIASHKLLLRAGYIRRIGSGIYAYLPLLWRVLQKVSAVVREE 85 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N GA+E +P LQ ++LW SGR+ Y M L DR + + GPTHEEV+T + Sbjct: 86 LNAAGALETLLPQLQPSELWQRSGRWAGYTDGEGIMFHLEDRQGRELGLGPTHEEVITAL 145 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP YQ+Q KFRDE+RPRFG+MR REF+MKDAYSF + K +Y M Sbjct: 146 AADLLRSYRQLPVNLYQVQTKFRDEIRPRFGLMRGREFIMKDAYSFHANEDCLKQTYGLM 205 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 +Y RIF R GL+++ + A+SG IGG S EF+V A++GE + Sbjct: 206 DQAYRRIFQRCGLRAVAVEADSGAIGGSASQEFMVTAESGEDLIL 250 Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 70/241 (29%), Positives = 117/241 (48%), Gaps = 8/241 (3%) Query: 213 LADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL- 271 A E + ++ I N + + ++ AP +A D+ + + D Sbjct: 392 WAPRFERFADGTATALEVFICGANERYAHRLGVSWAALG-GAPDSA--DLRSAQPGDRCI 448 Query: 272 --PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVI 329 P ++RGIEVGHIF G KYS + ATF G++ + MG YGIG R+ A + Sbjct: 449 HDPSQTLEASRGIEVGHIFQLGRKYSTALDATFTNESGQEEPLWMGCYGIGVSRLAQAAV 508 Query: 330 ESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIG 389 E HD GI WP ++AP+++ ++ D E +Y +L G DV DD E+ G Sbjct: 509 EQHHDANGICWPTAIAPYEVIVVIANVKATEQVDLAEGLYDQLQAAGVDVLLDDRSERAG 568 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS-HRFSNNRPV 448 +F +LLG P +V+VG + ++ +VE+ R TG ++D++ +++ + + Sbjct: 569 VKFKDTELLGIPWRVVVG-RGAAEGQVELVQRSTGAKQDLAADQLEATLLPQLLLERQGL 627 Query: 449 L 449 L Sbjct: 628 L 628 >gi|194223978|ref|XP_001498225.2| PREDICTED: threonyl-tRNA synthetase [Equus caballus] Length = 722 Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats. Identities = 75/447 (16%), Positives = 150/447 (33%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 305 KMLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNTLIEFIRSE 362 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + P + +F Sbjct: 363 YRKRGFQEVVTPNIYNSRLWMTSGHWQHYSENMFSFEVEKEL-FALKPMNCPGHCLMFDH 421 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 422 RPRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAIEQIEDE-IKGCLD 480 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E A+ Sbjct: 481 FLRTVYSVFGFSFKLN-LSTRPEKFLGDIEVWNQAEK-----------------QLENSL 522 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F +++L Sbjct: 523 NEFGEKWVLNPGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRFNLTFV 575 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 576 SH--DGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP--- 627 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C + +K+ + V D D G + + A L + ++VG K + V I Sbjct: 628 TCDEYAQKVRQQFHDAKFMVDVDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKTSGTVNI 687 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R + + +L E I + Sbjct: 688 RTRDNKVHGERTLSETIERLQQLKQSR 714 >gi|189219987|ref|YP_001940627.1| Threonyl-tRNA synthetase [Methylacidiphilum infernorum V4] gi|189186845|gb|ACD84030.1| Threonyl-tRNA synthetase [Methylacidiphilum infernorum V4] Length = 611 Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats. Identities = 84/465 (18%), Positives = 144/465 (30%), Gaps = 61/465 (13%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + Q RD +L L + + G+ WLP G + + EE + G Sbjct: 180 QLEQAKKRDHRKIGKELELFL-IDERVGAGLPLWLPKGAVIRRELQNFLTEELLQRGYQL 238 Query: 69 MSVPTLQSADLWVESGRYDSYG----------KEMLRLADRNDKA--------------M 104 + P + S DL+ SG Y Y E+ D+ Sbjct: 239 VYTPHIGSLDLFRTSGHYPYYRESQFPPILDPDELKAFEDKTGSCAELANRLEKGEVGGY 298 Query: 105 IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSF 163 + P + + IF S +SYR+LP + +R E G+ R R F DA+ F Sbjct: 299 LLKPMNCPMHIRIFDSKPRSYRDLPVRIAEFGTVYRFEKSGELSGLTRVRGFTQDDAHIF 358 Query: 164 DLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC 223 T + + ++GL ++ G E + + Sbjct: 359 C-TESQVEGELMDCLDLVKVVIQKVGL------LDTKARLGLRGEE--------KEKYVG 403 Query: 224 SKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 S + A Y D + D++ + ++ ++ Sbjct: 404 SPESWKKAEEGLRRAAAKSGIDFVEEPGEAAFYGPKVDFL---VKDAIGRSWQLGTVQLD 460 Query: 284 VGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWP 341 F S ++ G DG+ H + R +A +IE + Sbjct: 461 YNLPARF--------SLSYVGEDGQLHAPVIIHRAPFGSLERFLAILIEHYEGHFPLWLA 512 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 EKI L + V D + +G++ VA L P Sbjct: 513 PEQVRVIPV-------SDGLIAYGEKIKEILQQNRFRVSLDRKNDTLGAKIRVAQLQKVP 565 Query: 402 LQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 +IVG K S+V ++ G +MSL+ I+ + + R Sbjct: 566 YMLIVGKKEEQMSRVSVRTSKKGNIGEMSLDTFISLITAEYKERR 610 >gi|222480176|ref|YP_002566413.1| threonyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239] gi|222453078|gb|ACM57343.1| threonyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239] Length = 649 Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats. Identities = 77/440 (17%), Positives = 136/440 (30%), Gaps = 42/440 (9%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + RD ++ L + I G+ + P G+ L ++ E G E Sbjct: 240 REEALERDHRKIGQEMNLFS--IPTVTGPGLPLYHPPGKTVLRELSNFANELNRENGYEE 297 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNL 128 + P + +LW +SG Y++Y +M L D ND+ P + IF SYR+L Sbjct: 298 VETPHVFRTELWKKSGHYENYKDDMF-LLDVNDEEYGLKPMNCPGHATIFDQQSWSYRDL 356 Query: 129 PFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 P +++ +R E R G+ R F + D + F + + + + Sbjct: 357 PQRYFENGKVYRKEQRGELSGLSRVWSFTIDDGHLFVRPDQIRQE-IESVIEMIFEVVET 415 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 L L A T + + + + Sbjct: 416 LDLDVEVALA------------------TRPDKSVGGDEIWESAEEQLRDVLESGGYEYD 457 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 + A Y D E D+L ++ F ++ T+ G D Sbjct: 458 VEPGDGAFYGPKIDFGFE---DALGRVWDGPTVQLD----FNMPDRFD----LTYTGEDN 506 Query: 308 KDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 +DH + G+ V+ DG +W + I Sbjct: 507 EDHQPVMIHRALYGSYERFFMVLIEHFDGDFPLW------LAPEQVRILPVSDETLGYAH 560 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 ++ L G V +D +G + P VIVG V ++ R R Sbjct: 561 RVKNELEDAGFRVEVEDRDWTVGRKIRAGHDDRLPYMVIVGEDEQEAGTVSVRDRFENQR 620 Query: 427 EDMSLEEVINYASHRFSNNR 446 D+ L+ +++ R Sbjct: 621 GDVDLDAFVDHLVAERDEKR 640 >gi|121612398|ref|YP_001000243.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176] gi|152016593|sp|A1VYQ2|SYP_CAMJJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|87250412|gb|EAQ73370.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176] Length = 569 Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats. Identities = 112/271 (41%), Positives = 158/271 (58%), Gaps = 4/271 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 2 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + GPTHEE M + ++ Sbjct: 62 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKKNEFVLGPTHEEAMLSLVKN 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 122 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ E Sbjct: 182 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICENC-DYAANVEAA--- 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 E+ A YA+ N K DSL Sbjct: 238 KRAKKTCQDERPEANYASKFHTPNIKTIDSL 268 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 64/223 (28%), Positives = 110/223 (49%), Gaps = 6/223 (2%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS---DVHNEKLFDSLPEN--KRVSA 279 ++DF + +E + + D+ K D + K + Sbjct: 347 DFYIDFELENEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLIEVKEGDCCVKCGAKLKQS 406 Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE++HD KG I Sbjct: 407 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEANHDEKGCI 466 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W ++APF + +I D+ + K+Y L+ +G +V DD E+ G + +L+G Sbjct: 467 WNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMNDFELMG 526 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 FP +++G K + ++++E+ R ++E + +E++ + Sbjct: 527 FPYALVIG-KGLENNEIELIQREDLVKELIKTDELMEILKKKV 568 >gi|317011967|gb|ADU82575.1| threonyl-tRNA synthetase [Helicobacter pylori Lithuania75] Length = 612 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 151/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ WLP G + + ++ + G Sbjct: 207 YLFQIEEAKKRDHRKLGVELGLFS-FDDEIGAGLPLWLPKGARLRKRIEDLLSKALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + L Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCS-----FEQIQSEVSAILDF 379 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + I + + T + + + + Sbjct: 380 --------------THKIMQAFDFSYEMELSTRPAKSIGDDKVWEKATNALKEALKEHRI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 DYKIDEGGGAFYGPKIDI---KITDALRRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + Sbjct: 475 ERNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHHV 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + +A+ P+ +++G++ V + I+ R Sbjct: 529 FALKLKEALKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 589 QDQYKMPLKEFLNMVESKMQE 609 >gi|281341862|gb|EFB17446.1| hypothetical protein PANDA_008118 [Ailuropoda melanoleuca] Length = 678 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 73/447 (16%), Positives = 151/447 (33%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 261 KMLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNTLIEFIRSE 318 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + P + +F Sbjct: 319 YRKRGFQEVVSPNIYNSRLWMTSGHWQHYSENMFSFEVEKEL-FALKPMNCPGHCLMFDH 377 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 378 RPRSWRELPLRIADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAIEQIEDE-IKGCLD 436 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 +++ G + P E A+ Sbjct: 437 FLRTVYNVFGFSFKLN-LSTRPEKFLGDIEVWNQAEK-----------------QLENSL 478 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F +++L Sbjct: 479 NEFGEKWELNPGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRFNLTFV 531 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 532 SH--DGDDKKRPVIVHRAILGSVERMIAILT---ENFGGKWPFWLSPRQVMVVPVGP--- 583 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C + +K+ + V D D G + + A L + +++G K + V I Sbjct: 584 TCDEYAQKVRQQFHDAKFTVDIDLDPGCTLNKKIRNAQLAQYNFILVIGEKEKASGTVNI 643 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R + + ++ E I + Sbjct: 644 RTRDNKVHGERTISETIERLQQLKQSR 670 >gi|308183917|ref|YP_003928050.1| threonyl-tRNA synthetase [Helicobacter pylori SJM180] gi|308059837|gb|ADO01733.1| threonyl-tRNA synthetase [Helicobacter pylori SJM180] Length = 612 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 77/441 (17%), Positives = 151/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ WLP G + + ++ + G Sbjct: 207 YLFQIEEAKKRDHRKLGVELGLFS-FDDEIGAGLPLWLPKGARLRKRIEDLLSKALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + L Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCS-----FEQIQSEVSAILDF 379 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + I + + T + + + + Sbjct: 380 --------------THKIMQAFDFSYEMELSTRPAKSIGDDKVWEKATNALKEALKEHRI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 DYKIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + Sbjct: 475 EHNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHHV 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + +A+ P+ +++G++ + + I+ R Sbjct: 529 FALKLKEELKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEMETEILSIRDREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 589 QTQYKMPLKEFLNMVESKMQE 609 >gi|239621659|ref|ZP_04664690.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515534|gb|EEQ55401.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 607 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 107/284 (37%), Positives = 156/284 (54%), Gaps = 2/284 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DA++ S KL+ R G I + + GI++WLPLG + L+ + AIIREE Sbjct: 10 RMSTMFLRTLREDPADADVDSAKLLQRAGYIRKAAPGIWTWLPLGLRVLNKIEAIIREEI 69 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+ P L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 70 NGIGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDM 129 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG + +Y +Y Sbjct: 130 YSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFVMKDAYSFTIDEEGMRKAYYDERGAY 189 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF-- 239 RIF RL LK +P+ A SGP+GG S EF+ GE + + + + +T Sbjct: 190 ERIFQRLDLKYVPVFAMSGPMGGSASEEFLAPMPIGEDTFALAPSGKAWNVEALSTPELP 249 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 + S + P A T D E+ P + + Sbjct: 250 EIDASTTPAASKEATPDAKTIDNMIERANADHPRTDGREWQASD 293 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 4/191 (2%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLP 297 ++ + ++V + + D P+ RG+E+G +F G KYS Sbjct: 399 ENEVDYYNLVYGRDFKVDGVVEAVEVRHGDMSPDGSGPLSFERGVEIGQVFQLGLKYSKA 458 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + +GK V MG YGIG RV+A + E+ HD G+ W SV + Sbjct: 459 LDLKVLDQNGKAVPVWMGCYGIGVSRVLACIAETHHDEAGLAW-PSVIAPAAVHVVATGK 517 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D V + EK+ A L G +V +DD + G +F A+L+G PL +VG +V+D + Sbjct: 518 DAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFKDAELIGVPLVAVVGRDYVNDGTI 577 Query: 417 EIKHRLTGIRE 427 E++ R + Sbjct: 578 ELRDRNGENKV 588 >gi|327183775|gb|AEA32222.1| prolyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118] Length = 565 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 109/265 (41%), Positives = 148/265 (55%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SHKLM+R G I Q + G+Y++LPLG + L AII +E Sbjct: 1 MRQSKFFMPTLKEAPSDAVAESHKLMIRGGYIRQVTAGVYAYLPLGYRVLRKAEAIIEQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MDRINVPEMIMPHLLPATLWQESGRYKKYGPEMFKLKDRHGRESLLGPTHEETFTEIIAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T + +N + Sbjct: 121 NLKSYKQMPMALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATRDQLDEQFNDQENA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R G+ P+ A+SG +GG S EF A GE + +++ D Sbjct: 181 YKRIFKRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNENGTYAANLEMAKSID 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 ++ T D + Sbjct: 241 TFKQDPEDPKELTKIATPDCDTIEK 265 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 64/192 (33%), Positives = 100/192 (52%), Gaps = 2/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A V NE D + IEVGHIF GT Y+ M A F +GK Sbjct: 375 DFKVDEFADLRVANEGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTKTMGADFLDQNGKAQ 434 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V MGSYGIG R+++A +E +G+ WP +APF+I ++ +K + + EK+ Sbjct: 435 PVIMGSYGIGVTRMLSAAVEQHLTERGVAWPKEIAPFEIHIVQMKMNKDDQTELAEKLEK 494 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + S+ DV +DD E+ G +FA ADL+G P+++ +G K +D VE+K +MS Sbjct: 495 KFSEK-YDVLYDDRKERAGVKFADADLVGAPIRITIGKK-AADGIVEVKRPTDAKATEMS 552 Query: 431 LEEVINYASHRF 442 ++E+ + + Sbjct: 553 IDELDKFVNQEL 564 >gi|45190711|ref|NP_984965.1| AER105Wp [Ashbya gossypii ATCC 10895] gi|44983690|gb|AAS52789.1| AER105Wp [Ashbya gossypii ATCC 10895] Length = 457 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 81/447 (18%), Positives = 159/447 (35%), Gaps = 44/447 (9%) Query: 18 AEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR-EEQNRTGAIEMSVPTLQS 76 A S + L + S G +LP G K + + ++ ++QN+ G E+ P + Sbjct: 37 AREVSSRQDLY--LTDPISPGSTFFLPNGTKVFNKLIQFMKLQQQNKFGFQEVITPLIYR 94 Query: 77 ADLWVESGRYDSYGKEMLRLA--DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQ 134 LW +SG +++Y +M R+ D + P + +F+ +SY LP F Sbjct: 95 KSLWEQSGHWENYKDDMFRVEGNDCAKEEYGLKPMNCPGHCVMFKRFDRSYTELPLRFSD 154 Query: 135 IQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSI 193 R+E G+ R R+F D + F + + + L L L Sbjct: 155 FSPLHRNEASGALSGLTRVRKFHQDDGHIFCTPEQVEGEIEKCLQLVDLCYGSVLPLGET 214 Query: 194 PMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT 253 RAE + E + D + + D+ SI E Sbjct: 215 SDRAELYTMCLSTRPE----------KYVGELDVWNHAESVLKSILDNSGKQWSINEGDG 264 Query: 254 APYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV- 312 A Y D+ K+ D + +V+ ++ F ++ + +K AD Sbjct: 265 AFYGPKVDI---KVKDHTGKYHQVATIQLD----FQLPERFDMR----YKDADNTYKRPI 313 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA-- 370 + G++ A++ D WP + P + ++ + A + A + + Sbjct: 314 MIHRAVFGSVERFMALLL---DSNKGNWPFWLNPHQCMVLPVSASNGEMVQAAKALVDKL 370 Query: 371 -----------RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 L+ + D E +G + A + V++G++ ++ +KV ++ Sbjct: 371 CGRDTSSTKPVELNSFHFNAEIDLRDESVGYRLRDAISRKYSYIVLIGARELAQNKVAVR 430 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 R + + MS EE+ + + Sbjct: 431 SRDSSKIQMMSTEELYDMFCDLERKYK 457 >gi|170016989|ref|YP_001727908.1| prolyl-tRNA synthetase [Leuconostoc citreum KM20] gi|226701307|sp|B1MY62|SYP_LEUCK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|169803846|gb|ACA82464.1| Prolyl-tRNA synthetase [Leuconostoc citreum KM20] Length = 571 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 108/271 (39%), Positives = 152/271 (56%), Gaps = 5/271 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH+L+L+ G I S G +S+LP+ ++ L+ + IIREE Sbjct: 1 MKQSKLLMPTLREVPADAEVKSHQLLLKAGFIRPVSAGTFSYLPMAKRVLNKIEQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R A EM VP + A+LW +SGRY +YG + + +R D+ I GPTHEE T + Sbjct: 61 MDRIDANEMLVPEILPAELWQKSGRYTTYGPNLYKFKNRQDRDFILGPTHEETFTQLMAD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE RPRFG++R+REF+MKDAYSF G ++ M + Sbjct: 121 DIKSYKKLPLVVYQIQPKFRDENRPRFGLLRTREFIMKDAYSFSADQAGLDTAFRNMESA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +F R+GL + ++G +GG S EF A GE + S D+ E Sbjct: 181 YTNVFDRIGLNYRAIVGDAGAMGGSDSKEFSAPAAAGEDIIAYSDTT-DYAANLE----M 235 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 ++A D NEK + L Sbjct: 236 AKDFYERQKPTFSAEPLEKIDTPNEKTIEEL 266 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 59/158 (37%), Positives = 90/158 (56%), Gaps = 1/158 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 V +GIE+GHIF GT+YS M A +G+ + MGSYGIG R+++A++E Sbjct: 398 GHGHLVFTKGIEIGHIFKLGTRYSKAMGAQVLDENGRQVDMIMGSYGIGVSRLLSAIVEQ 457 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 D G++WP SVAPF + ++ + D ++ L+K G +V DD E+ G + Sbjct: 458 KADDDGLVWPASVAPFDVHIVPVNTKDDEQAGVASQLEELLTKQGLEVLIDDRKERAGVK 517 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 FA ADL+G P+++ VG K S+ VE+K R + +M Sbjct: 518 FADADLIGLPIRITVGKK-ASEDVVEVKVRASNTNIEM 554 >gi|16552114|dbj|BAB71241.1| unnamed protein product [Homo sapiens] Length = 707 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 74/447 (16%), Positives = 150/447 (33%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + + + +E RD + L H S G +LP G + + IREE Sbjct: 290 KMMRDWEKFQEEAKNRDHRKIGKEQELF--FFHDLSPGSCFFLPRGAFIYNTLTDFIREE 347 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ E+ P + ++ LW SG + Y + M D P + +F Sbjct: 348 YHKRDFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIEKDT-FALKPMNCPGHCLMFAH 406 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R +P F + R+EL G+ R R F DA+ F + + Sbjct: 407 RPRSWREMPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQ-IEEEIKGCLQ 465 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G F + T + + Sbjct: 466 FLQSVYSTFGFS------------------FQLNLSTRPENFLGEIEMWNEAEKQLQNSL 507 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D + A Y D+ K+ D++ + + ++ F +++L Sbjct: 508 MDFGEPWKMNPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRFNLTYV 560 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K V + +G++ + A++ + G WP ++P ++ +I + Sbjct: 561 SK--DGDDKKRPVIIHRAILGSVERMIAILS---ENYGGKWPFWLSPRQVMVIPVGP--- 612 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C ++ + + G D D + + A L + ++VG K D+ V + Sbjct: 613 TCEKYALQVSSEFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNV 672 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R I ++ + I+ + Sbjct: 673 RTRDNKIHGEILVTSAIDKLKNLRKTR 699 >gi|121610033|ref|YP_997840.1| threonyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2] gi|166225514|sp|A1WMG5|SYT_VEREI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|121554673|gb|ABM58822.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2] Length = 639 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 85/447 (19%), Positives = 150/447 (33%), Gaps = 44/447 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L I +HS G W P G V +R Sbjct: 230 QYLTMLEEAEKRDHRKLGRELDLF--HIDEHSPGTVFWHPKGWTLWQEVEQYMRRVYRDN 287 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + LW ++G +D Y + M + + + P + IF+ IKS Sbjct: 288 GYQEVKGPQILDQGLWEKTGHWDKYRENMF-VTESEKRDYALKPMNCPGHIIIFKQGIKS 346 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP F + R+E G+MR R F D + F + + Sbjct: 347 YRDLPLRFGEFGQCHRNEPSGGLHGIMRVRAFTQDDGHIFCTAQQIQSE-ILAFTALVQK 405 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G I + + P + E D + Sbjct: 406 VYRDFGFTDIIYKLATRPEKHIGTEE-----------------SWDQAEHALAQGLRASG 448 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y + L D+L + ++ + A F Sbjct: 449 CEFEYLPGEGAFYGPKVEY---TLKDALGRQWQCGTIQVDPNMP--------ERLDAEFV 497 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G DG H + +G++ ++ + P +AP +++L+NI + Sbjct: 498 GEDGARHRPIMLHRAIVGSLERFIGILL---EQHAGALPAWLAPVQLALLNIT---EAQS 551 Query: 363 DACEKIYARLSKV----GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D C +I A++ K G + D E+I + + P ++ G K + V + Sbjct: 552 DYCREIAAKMQKALSHLGLRLLLDLRNEKITYKIREHSMQKLPYILVAGDKERAAGAVAV 611 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R G MS++ I + S Sbjct: 612 RARGHGDLGVMSVDAFIERIADEISTK 638 >gi|330718639|ref|ZP_08313239.1| prolyl-tRNA synthetase [Leuconostoc fallax KCTC 3537] Length = 572 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 108/235 (45%), Positives = 147/235 (62%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE+ SH L+L+ G I + G++S+LPL Q+ L+ + AI+REE Sbjct: 1 MKQSKLLMPTLREVPADAEVRSHALLLKAGYIRPVAAGMFSYLPLAQRVLNKIEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A EMSVP + A+LW ESGRY +YG + + +R ++ I GPTHEE T + R Sbjct: 61 MAKIDANEMSVPEILPAELWQESGRYATYGPALYKFKNRQNRDFILGPTHEETFTQLMRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDE RPRFG++R+REF+MKDAYSF EG +Y M + Sbjct: 121 DIKSYKKLPLLVYQIQAKFRDENRPRFGLLRTREFIMKDAYSFSADQEGLDDAYRAMEQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R+GL + ++G +GG S EF AD GE + S D+ E Sbjct: 181 YTNIFDRVGLTYRAIVGDAGAMGGSDSKEFSAPADAGEDIIAYSD-ATDYAANLE 234 Score = 149 bits (376), Expect = 1e-33, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 103/207 (49%), Gaps = 3/207 (1%) Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL--PENKRVSARGIEVGHIFYFGTKYS 295 D +S + T P D + D + K V +GIE+GHIF GT+YS Sbjct: 363 HDDQHLSHINWQRDVTLPEENVGDFRVAREGDLSVDGKGKLVFTKGIEIGHIFKLGTRYS 422 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 + A +G+ + MGSYGIG R+++A+ E D G++WP SVAPF + ++ I Sbjct: 423 EALGAQVLDKNGRQTDMIMGSYGIGISRLLSAISEQKADEDGLVWPTSVAPFDVHIVPIN 482 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 D ++ + G +V DD E+ G +FA ADL+G P+++ VG K + Sbjct: 483 LKDTEQARVTRQLESEFLAQGLEVLVDDRKERAGVKFADADLIGLPIRITVGKK-AEEDI 541 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRF 442 VE+K R + +M + EV++ + Sbjct: 542 VEVKVRASNTNIEMRVSEVVDSVAVLL 568 >gi|295426319|ref|ZP_06818978.1| proline--tRNA ligase [Lactobacillus amylolyticus DSM 11664] gi|295063992|gb|EFG54941.1| proline--tRNA ligase [Lactobacillus amylolyticus DSM 11664] Length = 566 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 111/282 (39%), Positives = 151/282 (53%), Gaps = 1/282 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SHKLMLR G I Q + G+YS+LPLG + L I+ +E Sbjct: 1 MRQSKFFMPTLKEAPADAVAESHKLMLRGGYIRQVTAGVYSYLPLGFRVLRKAENIMEDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + EM +P A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MEKINVPEMMMPHFLPATLWQESGRYKKYGAEMFKLKDRHGRESLLGPTHEETFTEIIAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M DAYSF T E ++ + Sbjct: 121 NLKSYKQMPIALYQIQTKFRDENRPRFGLLRGREFVMLDAYSFAATREQLDEQFDDEKRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + ++ R G+ P+ A+SG +GG S EF A GE + ++ D Sbjct: 181 FENVYRRCGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNESGTYAANLEMAKSID 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGI 282 ++ T D EKL L K +GI Sbjct: 241 TFKQDPEDAKELTKVSTPGCDT-IEKLAKFLDVPKTRIVKGI 281 Score = 144 bits (362), Expect = 4e-32, Method: Composition-based stats. Identities = 66/193 (34%), Positives = 97/193 (50%), Gaps = 3/193 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A NE D + IEVGHIF GT Y+ M A F +GK Sbjct: 375 DFKVDEFADIRTANEGEPDPVDHEPLKFTTSIEVGHIFKLGTYYTKTMGADFLDNNGKAK 434 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGII-WPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V MGSYGIG R+++AV+E G I WP +APF I LI +K ++ EK+ Sbjct: 435 PVIMGSYGIGVTRMLSAVVEQHLTNHGGIAWPKEIAPFSIHLIQMKMNNDEQTQLAEKLE 494 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 LS DV +DD E+ G +F ADL+G P+++ +G K +D VE+K ++ Sbjct: 495 KELSAK-YDVLYDDRKERPGVKFNDADLVGAPVRITIGRK-AADGIVEVKRPNDDKATEI 552 Query: 430 SLEEVINYASHRF 442 S++++ +Y + Sbjct: 553 SVDQLNDYLTKEL 565 >gi|293192627|ref|ZP_06609581.1| threonine--tRNA ligase [Actinomyces odontolyticus F0309] gi|292820134|gb|EFF79131.1| threonine--tRNA ligase [Actinomyces odontolyticus F0309] Length = 677 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 70/450 (15%), Positives = 144/450 (32%), Gaps = 42/450 (9%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 I + RD +L L + + G+ + P G + + + + G Sbjct: 245 RIKEAERRDHRRLGAELDLYS-FPEEIGPGLVVFHPKGGILRHEIESYVTDRHKAAGFDF 303 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHEEVMTD 116 + P + L+ SG Y M + + + + Sbjct: 304 VHTPEISKGGLFHTSGHLPYYADTMFPPMLVDEERDEDGNVTKAGQEYYLKAMNCPMHNL 363 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IFRS +SYR LP FY++ +R E G+ R R F D++++ + S+ Sbjct: 364 IFRSRGRSYRELPLRFYELGHDYRYEKSGVVHGLTRMRGFTQDDSHTYCTPEQASEE-IR 422 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 +L I GLK + + G +FI + + Sbjct: 423 TQIAFFLSILSAFGLKDFYLELSTRDEDGKKKDKFIGSDED-----------WAAATKAL 471 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 A Y + ++ D++ ++S + F ++ Sbjct: 472 EDACAATGLDLVPDPGGAAFYGPKV---SVQVKDAIGRTWQMSTIQYD----FNQPDRFD 524 Query: 296 LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 L +A + V + S +G++ V+ + +P ++P ++ LI + Sbjct: 525 LEYTAA---DGSRQRPVMIHSAKLGSVERFIGVLT---EHYAGAFPAWLSPVQVRLIPVA 578 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + + + A+L + G V D ++ G + A P +I G + V Sbjct: 579 ---EAFDGYVKDVAAKLRERGVRVETDLSDDRFGKKIRNASKDKIPFTLIAGGEDVEAGA 635 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + R ++++ + Sbjct: 636 VSFRLRDGSQHNGVAVDRAVELIVSHIEQR 665 >gi|224090286|ref|XP_002193839.1| PREDICTED: threonyl-tRNA synthetase [Taeniopygia guttata] Length = 711 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 73/447 (16%), Positives = 154/447 (34%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 294 KMLKEWEKFQEEAKSRDHRKIGRDQELF--FFHELSPGSCFFLPKGAYIYNTLIEFIRSE 351 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y M + P + +F Sbjct: 352 YRKRGFQEVVTPNVFNSKLWMTSGHWQHYSDNMFSFEVEKEI-FALKPMNCPGHCLMFDH 410 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + + K + Sbjct: 411 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEEE--IKSCL 468 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 +LR + + S + + P E A+ Sbjct: 469 GFLRTVYDVFGFSFKLNLSTRPEKYLGDIEVWNQAEK-----------------QLENSL 511 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + A Y D+ ++ D++ + + ++ F +++L Sbjct: 512 NAFGEKWELNPGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPVRFNLTFV 564 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + + K V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 565 SH--DGNDKTRPVIIHRAILGSVERMIAILT---ENYGGKWPLWLSPQQVMVVPVGP--- 616 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C + +K+ G D D G + + A + + ++VG K + V I Sbjct: 617 ACDEYAQKVRQHFHDAGFMADVDVDPGCTLNKKIRNAQIAQYNFILVVGEKEKASGTVNI 676 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R + + ++ + + + Sbjct: 677 RTRDNKVHGERTIADTVERLLQLKCSR 703 >gi|317503053|ref|ZP_07961132.1| threonine--tRNA ligase [Prevotella salivae DSM 15606] gi|315665826|gb|EFV05414.1| threonine--tRNA ligase [Prevotella salivae DSM 15606] Length = 649 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 73/449 (16%), Positives = 146/449 (32%), Gaps = 36/449 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L + KG+ WLP G + + ++R Sbjct: 232 EYLVMLEEAKKRDHRKIGKEMELFM-FSDRVGKGLPIWLPKGTQLRLRLQKLLRSLLRPY 290 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + L+V SG Y YGK+ + D+ + P + +++ Sbjct: 291 HYQEVITPGIGGKSLYVTSGHYAHYGKDAFQPIHTPEEDEEYMLKPMNCPHHCEVYARKP 350 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + FR E G+ R R F DA+ F + + Sbjct: 351 RSYKDLPLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVRPDQVKSE-FETNIDII 409 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L++F + + + + S + + + + Sbjct: 410 LKVFKTFHFDNYEAQISLRD-------------PKDKEKYIGSDEIWEESENAIREACKE 456 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y D + D++ ++ ++ F Sbjct: 457 KGLVAHEEIGEAAFYGPKLDFM---VKDAIGRKWQLGTIQVDYNLPARF--------KLE 505 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + D + G++ AV+ G +W + I + Sbjct: 506 YTAEDNTKKTPVMIHRAPFGSLERFTAVLIEHTAGHFPLW------LTPDQVAILPISEK 559 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +++ VG DD E+IG + +L P VIVG K ++ V ++ Sbjct: 560 YNDYAKQVGQYFDTVGVRSVIDDRNEKIGRKIRDNELKRIPYMVIVGEKEAAEGLVSMRK 619 Query: 421 RLTGIREDMSLEEVINYASHRFSNNRPVL 449 + G + M +EE + ++ L Sbjct: 620 QGGGEQATMKMEEFAKRITDEVADQLKTL 648 >gi|296203929|ref|XP_002749128.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like [Callithrix jacchus] Length = 726 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 72/447 (16%), Positives = 151/447 (33%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + + + +E RD + L H S G +LP G + + IREE Sbjct: 309 KMMRNWEKFQEEAKNRDHRKIGKEQELF--FFHDLSPGSCFFLPRGAFIYNTLVDFIREE 366 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ E+ P + ++ LW SG + Y + M D P + +F Sbjct: 367 YHKRDFTEVLSPNMFNSKLWEASGHWQHYSENMFTFEIEKDT-FALKPMNCPGHCLMFAH 425 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R +P F + R+EL G+ R R F DA+ F + + Sbjct: 426 RPRSWREMPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQ-IEEEIKGCLQ 484 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G F + T + + Sbjct: 485 FLQSVYSTFGFS------------------FQLNLSTRPENFLGEIEMWNEAEKQLQNSL 526 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + A Y D+ K+ D++ + + ++ F +++L Sbjct: 527 MEFGEPWKMNPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRFNLTYV 579 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K V + +G++ + A++ + G WP ++P ++ +I + Sbjct: 580 SK--DGDDKKRPVIIHRAILGSVERMIAILS---ENYGGKWPFWLSPRQVMVIPVGP--- 631 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C ++ + + G D D + + A L + ++VG K ++ V + Sbjct: 632 TCEKYALQVSSEFFEEGFMADIDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKINNAVNV 691 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R I ++ + I+ + + Sbjct: 692 RTRDNRIHGEILVTSAIDKLKNLKKSR 718 >gi|321475248|gb|EFX86211.1| hypothetical protein DAPPUDRAFT_127463 [Daphnia pulex] Length = 688 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 69/439 (15%), Positives = 154/439 (35%), Gaps = 43/439 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + +R E + G E+ Sbjct: 282 EEAAKRDHRKLGREYELF--FFHELSPGACFFTPHGAHIYNTLVEFLRNEYKQRGFQEVI 339 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + ++ LW+ SG + Y + M + P + +F ++S+R LP Sbjct: 340 TPNVYNSKLWLTSGHWQHYSENMFSFEVEKET-YAMKPMNCPGHCLLFDHRVRSWRELPL 398 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + +++LR +++ Sbjct: 399 RLADFGVLHRNELSGALSGLTRVRRFQQDDAHIFCTMGQIKSE--INGALAFLRDVYKIF 456 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + +R + P E A+ ++ + Sbjct: 457 GFTFQLRLSTRPEKFLGEIETWNHAEK-----------------ELTESLNEFGETWLLN 499 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + + ++ F ++ + +F G+ Sbjct: 500 PGDGAFYGPKIDI---TIMDALRRPHQCATIQLD----FQLPIRF----NLSFINEAGEK 548 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + +G++ + A++ S+ GK W + + + +++ Sbjct: 549 EKPVIIHRAILGSVERMIAILTESYAGKWPFWLSPRQCVVVPVGPVFDG------YAQQV 602 Query: 369 YARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +++ G + D D G+ + + L ++VG K ++ V I+ R + Sbjct: 603 REQIAAAGFRITADIDAGDTMNKKIRNGQLSQHNFILVVGEKEQTNGTVNIRTRDNKVHG 662 Query: 428 DMSLEEVINYASHRFSNNR 446 + ++ +VI + S ++ Sbjct: 663 EHTIAKVIERFTQ-LSKDK 680 >gi|308182296|ref|YP_003926423.1| threonyl-tRNA synthetase [Helicobacter pylori PeCan4] gi|308064481|gb|ADO06373.1| threonyl-tRNA synthetase [Helicobacter pylori PeCan4] Length = 612 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 77/441 (17%), Positives = 150/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ WLP G + + ++ + G Sbjct: 207 YLFQIEEAKKRDHRKLGVELGLFS-FDDEIGAGLPLWLPKGARLRKRIEDLLSKALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + L Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCS-----FEQIQSEVSAILDF 379 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + I + + T + + + + Sbjct: 380 --------------THKIMQAFDFSYEMELSTRPAKSIGDDKVWEKATNALKEALKEHRI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 DYKIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + Sbjct: 475 EYNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHHV 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + A+ P+ +++G++ + + I+ R Sbjct: 529 FALKLKEVLKKRNIFVEVLDKNDSLNKKVRSAEKQKIPMILVLGNEEMETENLSIRDREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 589 QAQYKMPLKEFLNMVESKMQE 609 >gi|254819890|ref|ZP_05224891.1| threonyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950] Length = 691 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 69/449 (15%), Positives = 139/449 (30%), Gaps = 47/449 (10%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 I + RD +L L + + G+ + P G + R + G + Sbjct: 261 IEEAQRRDHRKLGTELDLFS-FPDEIGSGLAVFHPKGGIVRRELEEYSRRKHIAAGYEFV 319 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDI 117 + P + ADL+ SG D Y + M + + P + + T I Sbjct: 320 NTPHITKADLFHTSGHLDWYAEGMYPPMHLDAEYDDDGTVRKPGQDYYLKPMNCPMHTLI 379 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 FRS +SYR LP ++ +R E G+ R+R F M DA+ F + Sbjct: 380 FRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTMDDAHIFCAREQLHAEL-AS 438 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + L + GL+ + + + S + + Sbjct: 439 LLRFILELLGDYGLEDFYLELST----------------KDPEKFVGSDAMWEESTKALA 482 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + A Y + + D+L + ++S ++ F F ++ L Sbjct: 483 DVAAESGLQLVPDPGGAAFYGPKI---SVQARDALGRSWQMSTIQVD----FNFPERFEL 535 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 +A + V + G++ ++ + G W V I + Sbjct: 536 EYTAA---DGSRQRPVMIHRALFGSIERFFGILTEHYAGAFPAWLAPVQVVGIPVA---- 588 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D + A+L G V D +++ + P ++ G + V+ V Sbjct: 589 --DDHVDYLNDVAAQLRSHGVRVEVDASDDRMAKKIVNHTNQRVPFMLLAGDRDVAAGAV 646 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 + + + ++ ++ Sbjct: 647 SFRFGDRTQINGVPRDGAVDAIVKWIADR 675 >gi|317013544|gb|ADU80980.1| threonyl-tRNA synthetase [Helicobacter pylori Gambia94/24] Length = 612 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 79/441 (17%), Positives = 152/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ WLP G + + ++ E G Sbjct: 207 YLFQIEEAKKRDHRKLGVELGLFS-FDDEIGAGLPIWLPKGARLRKRIEDLLSEALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + + + Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQSE--VSAILDFTHK 382 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + S M + P E + + + Sbjct: 383 IMQAFDFSYEMELSTRPAKSIGDDE-----------------VWEKATNALKEALKEHRI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 DYKIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + Sbjct: 475 EHNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHHV 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + +A+ P+ +++G++ + + I+ R Sbjct: 529 FALKLKEELKKRDIFVEALDKNDSLNKKVRLAEKQKIPMILVLGNEEMETEILSIRDREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 589 QAQYKMPLKEFLNMVESKMQE 609 >gi|315038578|ref|YP_004032146.1| prolyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112] gi|312276711|gb|ADQ59351.1| prolyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112] Length = 565 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 109/265 (41%), Positives = 148/265 (55%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SHKLM+R G I Q + G+Y++LPLG + L AII +E Sbjct: 1 MRQSKFFMPTLKEAPSDAVAESHKLMIRGGYIRQVTAGVYAYLPLGYRVLRKAEAIIEQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MDRINVPEMIMPHLLPATLWQESGRYKKYGPEMFKLKDRHGRESLLGPTHEETFTEIIAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T + +N + Sbjct: 121 NLKSYKQMPMALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATRDQLDEQFNDQENA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R G+ P+ A+SG +GG S EF A GE + +++ D Sbjct: 181 YKRIFKRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNENGTYAANLEMAKSID 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 ++ T D + Sbjct: 241 TFKQDPEDPKELTKVATPDCDTIEK 265 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 64/192 (33%), Positives = 100/192 (52%), Gaps = 2/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A V NE D + IEVGHIF GT Y+ M A F +GK Sbjct: 375 DFKVDEFADLRVANEGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTKTMGADFLDQNGKAQ 434 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V MGSYGIG R+++A +E +G+ WP +APF+I ++ +K + + EK+ Sbjct: 435 PVIMGSYGIGVTRMLSAAVEQHLTERGVAWPKEIAPFEIHIVQMKMNKDDQTELAEKLEK 494 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + S+ DV +DD E+ G +FA ADL+G P+++ +G K +D VE+K +MS Sbjct: 495 KFSEK-YDVLYDDRKERAGVKFADADLVGAPIRITIGKK-AADGIVEVKRPTDAKATEMS 552 Query: 431 LEEVINYASHRF 442 ++E+ + + Sbjct: 553 IDELDKFVNQEL 564 >gi|108562547|ref|YP_626863.1| threonyl-tRNA synthetase [Helicobacter pylori HPAG1] gi|123247050|sp|Q1CV33|SYT_HELPH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|107836320|gb|ABF84189.1| threonyl-tRNA synthetase [Helicobacter pylori HPAG1] Length = 612 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 79/441 (17%), Positives = 152/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ WLP G + + ++ + G Sbjct: 207 YLFQIEEAKKRDHRKLGVELGLFS-FDDEIGAGLPLWLPKGARLRKRIEDLLSQALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + + + Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQSE--VSAILDFTHK 382 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + S M + P E + + + Sbjct: 383 IMQAFDFSYEMELSTRPAKSIGDDE-----------------VWEKATNALKEALKEHRI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 DYKIDEGGGAFYGPKIDI---KITDALRRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + Sbjct: 475 ERNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHHV 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + +A+ P+ +++G++ V + I+ R Sbjct: 529 FALKLKEELKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 589 QAQYKMPLKEFLNMVESKMQE 609 >gi|156042356|ref|XP_001587735.1| hypothetical protein SS1G_10975 [Sclerotinia sclerotiorum 1980] gi|154695362|gb|EDN95100.1| hypothetical protein SS1G_10975 [Sclerotinia sclerotiorum 1980 UF-70] Length = 791 Score = 210 bits (535), Expect = 4e-52, Method: Composition-based stats. Identities = 81/470 (17%), Positives = 151/470 (32%), Gaps = 56/470 (11%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD L H+ S G WLP G + + + + +REE + G E+ Sbjct: 320 LEEAAKRDHRKLGKDQELF--FFHELSPGSAMWLPHGARIYNTIQSFLREEYWKRGYNEV 377 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P + +++LW SG + Y +M D P + +F +S+R LP Sbjct: 378 ITPNMYNSELWKTSGHWAYYKDDMFTFPVEKDV-FALKPMNCPGHCLMFGHRERSHRELP 436 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 + + R+E G+ R R F DA+ F + +F I+ L Sbjct: 437 WRVADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCREDQIKDE-ITGLFDFLRAIYGLL 495 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 G ++ + P E +A+ D +P E Sbjct: 496 GFTF-KLKLSTRPEKFLGKIETWDMAEDKLRSALDEFASSDGGVPWEL------------ 542 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG----------------- 291 E A Y D+ + D L + + ++ FG Sbjct: 543 NEGDGAFYGPKIDI---TICDCLKREWQCATIQLDFQLPQNFGLEYNTGDVPTKKEEAAV 599 Query: 292 -------TKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS----HDGKGIIW 340 K + P + + R +A IE + W Sbjct: 600 KEPVVKPKKDTEPEDPNVPKERVYKPLTPGCARPVMIHRAMAGSIERFTAILIEHFAGKW 659 Query: 341 PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 P ++P +I +I + + +++ + K + D G + + L + Sbjct: 660 PFWLSPRQILVIPVGVG---YFEYAKEVQSIFHKQQMFIDVDLSGNTLQKKIRTGQLAQY 716 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIRED----MSLEEVINYASHRFSNNR 446 +VG ++ +V +++R +D +SL+E I + R Sbjct: 717 NFIFVVGDTEMNGREVNVRNRDDTSSQDRGKPVSLQEAIEKLTALRDERR 766 >gi|311068179|ref|YP_003973102.1| prolyl-tRNA synthetase [Bacillus atrophaeus 1942] gi|310868696|gb|ADP32171.1| prolyl-tRNA synthetase [Bacillus atrophaeus 1942] Length = 564 Score = 210 bits (535), Expect = 4e-52, Method: Composition-based stats. Identities = 107/225 (47%), Positives = 150/225 (66%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +P L+E P DA+ SH+L+LR G I Q++ G+YS++PL K + N+ I+REE Sbjct: 1 MRQSLTLIPTLREVPADADAKSHQLLLRAGFIRQNTSGVYSYMPLAYKVIKNIQTIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM +P LQ A+ W ESGR+ +YG E++RL DR+ + G THEEV+T + R Sbjct: 61 LEKINAVEMLMPALQQAETWQESGRWYTYGPELMRLKDRHGREFALGATHEEVVTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP T YQIQ KFRDE RPRFG++R REF+MKDAYSF + E +Y M+ + Sbjct: 121 EVKSYKRLPLTLYQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHASEESLDETYENMYGA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 Y IF R L P+ A+SG +GG +HEF+ L++ GE + S Sbjct: 181 YTNIFARCELNVRPVIADSGAMGGKDTHEFMALSEIGEDTIAYSD 225 Score = 168 bits (426), Expect = 2e-39, Method: Composition-based stats. Identities = 67/234 (28%), Positives = 120/234 (51%), Gaps = 3/234 (1%) Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 F+ + + + + + + + ++ A +D+ + D Sbjct: 332 FVGPVEVSKEVEVYADLAVKAMVNAVAGANEQDYHYKNVNVDRDAAIKEYADLRFIQEGD 391 Query: 270 SLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 P+ K GIEVG +F GT+YS M+AT+ +G+ + MG YGIG R ++A Sbjct: 392 PSPDGKGTIRFAEGIEVGQVFKLGTRYSEAMNATYLDENGRSQPMLMGCYGIGISRTLSA 451 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 + E HD KG+IWP SVAP+ + ++ + + ++ EK+Y G DV +DD E+ Sbjct: 452 IAEQHHDEKGLIWPKSVAPYDLHILALNMKNDAQKELAEKLYETFKTEGYDVLFDDRAER 511 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 G +FA +DL+G P+++ VG + + VE+K R TG ++S+EE+ ++ + + Sbjct: 512 AGVKFADSDLIGLPIRITVGKR-ADEGIVEVKIRKTGESSEVSIEELSDFINKQ 564 >gi|325997000|gb|ADZ49208.1| Threonyl-tRNA synthetase [Helicobacter pylori 2017] Length = 573 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 79/441 (17%), Positives = 152/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ WLP G + + ++ + G Sbjct: 168 YLFQIEEAKKRDHRKLGVELGLFS-FDDEIGAGLPLWLPKGARLRKRIEDLLSKALLLRG 226 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 227 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 285 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + + + Sbjct: 286 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQSE--VSAILDFTHK 343 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + S M + P E + + + Sbjct: 344 IMKAFDFSYEMELSTRPAKSIGDDE-----------------VWEKATNALKEALKEHRI 386 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 387 DYKIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVDMNLP--------ERFKLAFTN 435 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + Sbjct: 436 ERNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHHV 489 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + +A+ P+ +++G++ V + I+ R Sbjct: 490 FALKLKEELKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREK 549 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 550 QAQYKMPLKEFLNMVESKMQE 570 >gi|219681500|ref|YP_002467885.1| threonyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471181|ref|ZP_05635180.1| threonyl-tRNA synthetase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|254783512|sp|B8D8S6|SYT_BUCA5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|219624343|gb|ACL30498.1| threonyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 642 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 76/441 (17%), Positives = 141/441 (31%), Gaps = 42/441 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 +L L+ RD L L + + S G+ W G + + +R + Sbjct: 235 YLNELE--KRDHRKIGKFLQLY--HMQEESPGMIFWHNKGWIIFNELQNFVRVKLKEYKY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P L +W +SG +D+Y + + P + IF S +KSYR Sbjct: 291 EEVKTPLLIDKLIWKQSGHWDNYKNAIFT-TLSEHREYCIKPMNCPGHVQIFNSRLKSYR 349 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F + N ++ Sbjct: 350 DLPIRMAEFGSCHRNEPSGSLHGLMRVRNFTQDDAHIFCTREQVRSE-INDCIKMIYDLY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 K I ++ + P + + + + Sbjct: 409 STFHFKKILVKLSTRPEKR-----------------IGTDSLWNESEKDLSDMLIENHLS 451 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 A Y + L DSL N + ++ FY + S + Sbjct: 452 FEYQSGEGAFYGPKIEFI---LQDSLDRNWQCGTIQLD----FYLPLRLSSF----YINE 500 Query: 306 DGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + V + +G++ ++ G W V IS+ +I + Sbjct: 501 KNEKKVPVIIHRAILGSIERFIGILIEECSGNLPTWLSPVQVVIISITDISSG------Y 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++++ + S V + D E+IG + L P +I G K S K+ +++R Sbjct: 555 VKELFKKFSDVNIRIECDLRNEKIGFKIREHTLRRIPYILICGEKESSSKKISVRNRQGH 614 Query: 425 IREDMSLEEVINYASHRFSNN 445 + ++ I Sbjct: 615 NFGMIDVDFFIKKLQKEIITR 635 >gi|332251676|ref|XP_003274972.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic isoform 2 [Nomascus leucogenys] Length = 756 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 74/449 (16%), Positives = 148/449 (32%), Gaps = 44/449 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + + +E RD L H+ S G +LP G + + IR E Sbjct: 339 KMLKEWEKLQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNALIEFIRSE 396 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y M + P + +F Sbjct: 397 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSDNMFSFEVEKEL-FALKPMNCPGHCLMFDH 455 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 456 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 514 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E D Sbjct: 515 FLRTVYSIFGFSFKLN-LSTRPEKFLGDIE-----------------VWDQAEKQLENSL 556 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 557 NEFGEKWELNSGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 605 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 606 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 661 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ + D D G + + A L + ++VG K V Sbjct: 662 --TCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTV 719 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 I+ R + + ++ E I + Sbjct: 720 NIRTRDNKVHGERTISETIERLQQLKQSR 748 >gi|306822719|ref|ZP_07456097.1| threonine--tRNA ligase [Bifidobacterium dentium ATCC 27679] gi|304554264|gb|EFM42173.1| threonine--tRNA ligase [Bifidobacterium dentium ATCC 27679] Length = 708 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 65/459 (14%), Positives = 135/459 (29%), Gaps = 50/459 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L+E RD ++ L + + G+ + P G ++ + RE + Sbjct: 273 KAYQTRLEEAAKRDHRKLGAEMDLFS-FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRK 331 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHE 111 + P + L+ SG Y M + P + Sbjct: 332 HHYSFVQTPHITKGGLYETSGHLHWYKDGMYPAMRLDEEKDENGNIIKQGFDYYLKPMNC 391 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 392 PMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMK 451 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L + GL + + + S + + Sbjct: 452 DEL-KNLLTFVLGLLKDFGLDDFYLELST----------------KDPHKYVGSDEIWEE 494 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + A Y + + D++ +VS ++ F Sbjct: 495 ATNTLAEVAKESGLELVDDPCGAAFYGPKI---SVQARDAIGRTWQVSTIQLD----FNL 547 Query: 291 GTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 ++ + ADG + G++ AV+ + G W V + Sbjct: 548 PERF----KLEYIAADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGV 603 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 + ++ A L + D ++ G + A P +IVG + Sbjct: 604 PVA------DEFAPHLQRFIASLEEETVRCEIDMSDDRFGKKIRNASKSKVPFILIVGEE 657 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 ++++ V + R + ++E N V Sbjct: 658 DMNNNAVSFRFRDGSQLNGVPVDEAKNQIMTVLRKRVQV 696 >gi|296394267|ref|YP_003659151.1| prolyl-tRNA synthetase [Segniliparus rotundus DSM 44985] gi|296181414|gb|ADG98320.1| prolyl-tRNA synthetase [Segniliparus rotundus DSM 44985] Length = 599 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 96/223 (43%), Positives = 137/223 (61%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ F+ L+E+P DAE+A+HKL++R G + + S G+++WLPLG K L V A++REE Sbjct: 4 RLSELFVRTLREDPADAEVANHKLLVRGGYVRRVSPGVFTWLPLGLKVLRQVEAVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ +P L + S R+ YG + RL DR + PTHEE+ I + Sbjct: 64 DAIGAQEILLPALAPRQPYETSNRWTEYGDNLFRLKDRKGGDYLLAPTHEELFALIVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REF+MKDAYSFD+ G+K +Y+ +Y Sbjct: 124 YTSYKDLPVILYQIQTKYRDEERPRAGILRGREFVMKDAYSFDVDEAGNKAAYHAHRDAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCS 224 RIF RLG+ + + A SG +GG S EF+ + GE Sbjct: 184 QRIFDRLGVSYVIVAATSGAMGGSASEEFLAESAIGEDTYVRC 226 Score = 117 bits (292), Expect = 5e-24, Method: Composition-based stats. Identities = 62/172 (36%), Positives = 87/172 (50%), Gaps = 3/172 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T D + D P+ + V+ARGIE+GH+F GTKY+ S G +GK + MG Sbjct: 394 GTIDAAEVREGDPSPDGRGPLVAARGIEIGHVFALGTKYTDAFSVDVLGENGKPARLIMG 453 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+V + E D KG+ WP VAPF++ +++ A Sbjct: 454 SYGIGVSRLVGVIAEQWLDEKGLRWPPQVAPFQVHVLSTGKGGAEAEAAERYAAEL-ESH 512 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 G V DD G +FA A+LLG P+ V+VG + + KVE+K R +G Sbjct: 513 GLRVLLDDRKASPGVKFADAELLGAPVVVVVGRDWAGEGKVELKERFSGASG 564 >gi|261837575|gb|ACX97341.1| threonyl-tRNA synthetase [Helicobacter pylori 51] Length = 612 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 79/441 (17%), Positives = 151/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L G + G+ WLP G + + ++ + G Sbjct: 207 YLFQIEEAKKRDHRKLGVELGLF-GFDDEIGAGLPLWLPKGARLRKRIEDLLSKALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + L Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCS-----FEQIQSEVSAILDF 379 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + I + + T + + + + Sbjct: 380 --------------THKIMQAFDFSYEMELSTRPAKSIGDDKVWEKATSALKEALKEHRI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 DYKIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + Sbjct: 475 ERNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHHV 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + +A+ P+ +++G++ V + I+ R Sbjct: 529 FALKLKEALKKCDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVESEILSIRDREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 589 QAQYKMPLKEFLNMVESKMQE 609 >gi|206900126|ref|YP_002250745.1| threonyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12] gi|206739229|gb|ACI18287.1| threonyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12] Length = 638 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 75/438 (17%), Positives = 135/438 (30%), Gaps = 38/438 (8%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + RD +L + + G+ + P G + R+E + G + + Sbjct: 231 REEAQRRDHRKLGRELEIFDTF-EEAGPGLIFYPPKGAMLRLIIEEFERKEHLKRGYLPV 289 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P L A+LW SG +D+Y + M L DK P + I+ S ++SYR+LP Sbjct: 290 ITPHLMQAELWKRSGHWDNYRENMFFLQ-VEDKDYAVKPMNCPGHILIYNSKVRSYRDLP 348 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 F+++ +R E +G+ R+R F DA+ F + + + Sbjct: 349 LRFFEMGTVYRYERSGVLYGLERARGFTQDDAHIFCTQEQLEDE-IKGVLDFVFYMLDSF 407 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 GLK + + P S E + + + + I Sbjct: 408 GLKDYVVTLSTKPEKYIGSDE-----------------IWEKATQALKNALESVGIDYRI 450 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 E A Y DV + L L + + ++ F ++ L A K Sbjct: 451 AEGEGAFYGPKIDVGLKGL---LGKMWQGPTIQVD----FNLPERFDLTYDA--PDGTKK 501 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + + R + +IE + + + E + Sbjct: 502 RPVMIHRAILGSYERFIGILIEHYGGRFPLWLAPEQVRILPI-------SEKHNEYAEYV 554 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 L D ++ + A P IVG K + KV ++ Sbjct: 555 LRTLRDNEIRAEIDKDQAKLNYKLRKAIAEKVPYIFIVGDKEKEEGKVSVRIH-NKDLGV 613 Query: 429 MSLEEVINYASHRFSNNR 446 L VI + + Sbjct: 614 FDLSYVIAKLLEEIKSKK 631 >gi|241190576|ref|YP_002967970.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195982|ref|YP_002969537.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|240248968|gb|ACS45908.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250536|gb|ACS47475.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793563|gb|ADG33098.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis V9] Length = 605 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 103/284 (36%), Positives = 154/284 (54%), Gaps = 2/284 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DA++ S KL+ R G I + + GI++WLPLG L+ + +IREE Sbjct: 6 RMSTLFLRTLREDPADADVDSAKLLQRAGYIRKAAPGIWTWLPLGLAVLNKIEDVIREEI 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+ P L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 66 NGIGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDM 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG + +Y +Y Sbjct: 126 YSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTVDEEGMRQAYMDERGAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF RL LK +P+ A SGP+GG S EF+ GE + + + + +T + Sbjct: 186 ERIFQRLDLKYVPVFAMSGPMGGSASEEFLAPMPIGEDTFALAPSGKAWNVEALHTPAVE 245 Query: 242 IISLNSIVE--QWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 + + + + P A T D P + + Sbjct: 246 AVDCSQTPDATKRATPNARTIDEMIAFANAEYPREDGRDWQASD 289 Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 2/172 (1%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 RG+E+G +F G KYS + +GK V MG YGIG RV+A + E+ Sbjct: 430 GSGPLSFERGVEIGQVFQLGLKYSEALDLKVLNQNGKTVPVWMGCYGIGVSRVLACIAET 489 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGS 390 HD KG+ WP ++AP ++ ++ D+ +A E++ LS G +V +DD G Sbjct: 490 HHDDKGLAWPMNIAPAQVHVMATG-KDEAAFEAAERLVDELSANGIEVLYDDRRKVSPGV 548 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 +F A+L+G P+ + G V++ +E++ R E++S++ V R Sbjct: 549 KFKDAELIGVPIIAVAGRDTVNNGTIEVRDRDGSNSENISVDSVAQVIVDRV 600 >gi|306836251|ref|ZP_07469233.1| threonine--tRNA ligase [Corynebacterium accolens ATCC 49726] gi|304567843|gb|EFM43426.1| threonine--tRNA ligase [Corynebacterium accolens ATCC 49726] Length = 687 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 60/448 (13%), Positives = 134/448 (29%), Gaps = 47/448 (10%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD +L L + + G + P G + R + G ++ Sbjct: 260 EEAEKRDHRRLGQELDLFS-FPDEIGSGFPVFHPNGATVRMEMENHSRNRHVQAGYSFVN 318 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRND------------KAMIYGPTHEEVMTDIF 118 P + DL+ +SG D Y M + + P + + IF Sbjct: 319 TPHITKGDLFRKSGHLDFYSDGMFPPMQLDGEYDAEGNAVKEPQDYYAKPMNCPMHNLIF 378 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 S +SYR LP ++ +R E G+ R+R F DA+ + + + ++ Sbjct: 379 ASRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTEEQLEEEL-TQV 437 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 + + GL + + + S + + + Sbjct: 438 LDFIISLLEDYGLSDFYLELST----------------KDPNKFVGSDEIWERSTAILQS 481 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + + A Y + + D++ ++S ++ F ++ L Sbjct: 482 VAEKSGLELVPDPEGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FNLPERFELE 534 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 +A+ K + + G++ V+ + G W I + Sbjct: 535 YTAS---DGTKKRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVMGIPVA----- 586 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 E + A+L + G D +++ + P ++ G++ V Sbjct: 587 -DDFVPHLEGVAAKLRRKGIRADVDTSDDRMQKKIRNHTTGKVPFMLVDGARDAEAGAVS 645 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 + + ++E + S + Sbjct: 646 FRFLDGTQVNGVPVDEAVELISTWVAER 673 >gi|325685949|gb|EGD28012.1| proline--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 565 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 106/265 (40%), Positives = 145/265 (54%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +F+P L+E P DA SH++MLR G I Q + G+YS+LPLG K L II EE Sbjct: 1 MRQSIFFMPTLKETPADAVAKSHQVMLRGGYIRQVTAGVYSYLPLGYKVLRKTEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G +EM +P + A +W ESGR YG EM RL DR+ + M+ GPTHEE TD+ Sbjct: 61 MANAGVVEMIMPHMLPASMWEESGRLPKYGPEMFRLKDRHGREMLLGPTHEETFTDVVAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF + E ++ + Sbjct: 121 SLKSYKQMPLHLYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAASQEQLDKQFDNEKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+IF R G++ P+ A+SG +GG S EF A GE + + D Sbjct: 181 YLKIFKRTGVEVRPVIADSGTMGGKNSIEFQAPAAVGEDTIATNASGTYAANLEMAVSVD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 ++ D ++ Sbjct: 241 TFKQEPEELKAMEKVATPGCDSIDK 265 Score = 149 bits (376), Expect = 1e-33, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 98/193 (50%), Gaps = 3/193 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A V NE D + IEVGHIF GT Y+ M A F +GK Sbjct: 376 DFKVDRFADLRVANEGEPDPVDHEPLKFTTSIEVGHIFKLGTYYTETMGAKFLDQNGKSQ 435 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V MGSYGIG R+++AV+E G+ WP +APF I +I +K D++ E + A Sbjct: 436 PVIMGSYGIGVTRLLSAVVEQYATENGVAWPKEIAPFGIHIIQMKMKDEIQSKLAEDLEA 495 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + DV +DD E+ G +F ADL+G P+++ VG + +D VE+K + ++ Sbjct: 496 KF--AKYDVLYDDRNERPGVKFNDADLVGAPIRITVG-RDAADGIVEVKRPGDDQAQKLA 552 Query: 431 LEEVINYASHRFS 443 + ++ ++ ++ Sbjct: 553 VADLEDFIANELD 565 >gi|312132685|ref|YP_004000024.1| thrs [Bifidobacterium longum subsp. longum BBMN68] gi|322689212|ref|YP_004208946.1| threonyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F] gi|311773642|gb|ADQ03130.1| ThrS [Bifidobacterium longum subsp. longum BBMN68] gi|320460548|dbj|BAJ71168.1| threonyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F] Length = 677 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 59/461 (12%), Positives = 129/461 (27%), Gaps = 54/461 (11%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L+E RD ++ L + + G+ + P G ++ + RE + Sbjct: 242 KAYQTRLEEAAKRDHRKLGAEMDLFS-FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRK 300 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHE 111 + P + L+ SG Y M + P + Sbjct: 301 HHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEKDADGNITKPGADYYLKPMNC 360 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 361 PMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMK 420 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L + GL + + + S + + Sbjct: 421 DEL-TSLLTFVLNLLKDFGLTDFYLELST----------------KDPNKYVGSDEIWEE 463 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + A Y + + D++ +VS ++ F Sbjct: 464 ATNTLAEVAKESNLELVDDPCGAAFYGPKI---SVQARDAIGRTWQVSTIQLD----FNL 516 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 ++ + DG + R + IE + + + Sbjct: 517 PERF----QLEYIAKDGT------HQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAP 566 Query: 351 LINIKAHDQVCRDACEKIY---ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + + V + + L D ++ G + A P +IVG Sbjct: 567 VQVLGV--PVADEFAPHLAGFVKSLEDEMVRCEIDYSDDRFGKKIRNASKSKVPFILIVG 624 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 + ++++ V + R + +++ V Sbjct: 625 EEDMNNNAVSFRFRDGSQLNGVPVDKAREQILTVIKKRVQV 665 >gi|219682056|ref|YP_002468440.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|254783513|sp|B8D730|SYT_BUCAT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|219621789|gb|ACL29945.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311085869|gb|ADP65951.1| threonyl-tRNA synthetase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086439|gb|ADP66520.1| threonyl-tRNA synthetase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087022|gb|ADP67102.1| threonyl-tRNA synthetase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087587|gb|ADP67666.1| threonyl-tRNA synthetase [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 642 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 76/441 (17%), Positives = 141/441 (31%), Gaps = 42/441 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 +L L+ RD L L + + S G+ W G + + +R + Sbjct: 235 YLNELE--KRDHRKIGKFLQLY--HMQEESPGMIFWHNKGWIIFNELQNFVRVKLKEYKY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P L +W +SG +D+Y + + P + IF S +KSYR Sbjct: 291 EEVKTPLLIDKLIWKQSGHWDNYKNAIFT-TLSEHREYCIKPMNCPGHVQIFNSRLKSYR 349 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F + N ++ Sbjct: 350 DLPIRMAEFGSCHRNEPSGSLHGLMRVRNFTQDDAHIFCTREQVRSE-INDCIKMIYDLY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 K I ++ + P + + + + Sbjct: 409 STFHFKKILVKLSTRPEKR-----------------IGTDSLWNESEKDLSDMLIENHLS 451 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 A Y + L DSL N + ++ FY + S + Sbjct: 452 FEYQSGEGAFYGPKIEFI---LQDSLDRNWQCGTIQLD----FYLPLRLSSF----YINE 500 Query: 306 DGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + V + +G++ ++ G W V IS+ +I + Sbjct: 501 KNEKKVPVIIHRAILGSIERFIGILIEECSGNLPTWLSPVQVVIISITDISSG------Y 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++++ + S V + D E+IG + L P +I G K S K+ +++R Sbjct: 555 VKELFKKFSDVNIRIECDLRNEKIGFKIREHTLRRIPYILICGEKESSSKKISVRNRQGH 614 Query: 425 IREDMSLEEVINYASHRFSNN 445 + ++ I Sbjct: 615 NFGMIDVDFFIKKLQKEIITR 635 >gi|189200603|ref|XP_001936638.1| threonyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187983737|gb|EDU49225.1| threonyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 768 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 81/479 (16%), Positives = 147/479 (30%), Gaps = 64/479 (13%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + L L+E RD + L H+ S G +LP GQ + + A +REE Sbjct: 312 QAHLKFLEEAAKRDHRKIGKEQELF--FFHEFSPGSCFFLPHGQIIYNTLQAFLREEYWN 369 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + ++ LW SG + Y +M D + P + IF+ + Sbjct: 370 RGYQEVGSPNMYNSALWKISGHWQHYADDMFTF-DVEKEKWALKPMNCPGHCLIFKHRER 428 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP + R+E G+ R R F D + F + ++ + +F Sbjct: 429 SYRELPIRMADFGILHRNEASGALTGLTRVRRFQQDDTHVFCTQDQITEE-ISALFDFLR 487 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ + G + + P G E A+ + N Sbjct: 488 AVYGKFGFTFKM-KLSTRPEGFLGDIETWDKAEAKL-------------TEALNQFTAAG 533 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTKYSLPMSA 300 S + A Y D+ + D+L + + ++ F S + Sbjct: 534 GSAWELNPGDGAFYGPKIDI---TISDALKREFQCATIQLDFQLPNQFELEYMTSEVIPV 590 Query: 301 TFKG-----------------------------ADGKDHYVQMGSYGIGAMRVVAAVIES 331 K G V + G+ A++ Sbjct: 591 KNKDQPQEGGHIEQKKEKLEGADVTIPKKIKEPQPGYARPVMIHRAIYGSFERFIAILTE 650 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G+ W I ++ D +++ A L K D G + + Sbjct: 651 HFAGRWPFWLSPRQVMVIPVMP------GANDYVKEVQAELRKHRLHADIDISGNTMQKK 704 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED----MSLEEVINYASHRFSNNR 446 A L + ++VG++ V ++R + + L+E + R Sbjct: 705 IRTAQLALYNFIMVVGAEEQQARAVNWRNRDDQETQQRGVIVPLDEAVKKLVELRDERR 763 >gi|332672963|gb|AEE69780.1| threonine--tRNA ligase [Helicobacter pylori 83] Length = 612 Score = 210 bits (534), Expect = 5e-52, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 151/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ WLP G + + ++ + G Sbjct: 207 YLFQIEEAKKRDHRKLGMELGLFS-FDDEIGVGLPLWLPKGARLRKRIEDLLSKALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + + + +I Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQSE-VSAILDFTHKI 383 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G + P + + + Sbjct: 384 MQAFGFSYEM-ELSTRPAKS-----------------IGDDKVWEKATNALKEALKEHRI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 DYKIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + Sbjct: 475 EHNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHHV 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + +A+ P+ +++G++ V + I+ R Sbjct: 529 FALKLKEALKKHDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVESEILSIRDREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 589 QAQYKMPLKEFLNMVESKMQE 609 >gi|291395207|ref|XP_002714160.1| PREDICTED: threonyl-tRNA synthetase-like [Oryctolagus cuniculus] Length = 723 Score = 210 bits (534), Expect = 5e-52, Method: Composition-based stats. Identities = 73/447 (16%), Positives = 150/447 (33%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 306 KMLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNTLMEFIRSE 363 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + P + +F Sbjct: 364 YRKRGFQEVVTPNIYNSRLWMTSGHWQHYSENMFSFEVEKEL-FALKPMNCPGHCLMFDH 422 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 423 RPRSWRELPLRVADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 481 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 +++ G + P E A+ Sbjct: 482 FLRTVYNVFGFSFKLN-LSTRPEKFLGDIEVWNQAEK-----------------QLENSL 523 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F +++L Sbjct: 524 NEFGEKWELNPGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRFNLTFV 576 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 577 SH--DGDDKKRPVIIHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP--- 628 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C + +K+ + D D G + + A L + ++VG K + V I Sbjct: 629 TCDEYAQKVRQQFHDAKFMADIDLDAGCTLNKKIRNAQLAQYNFILVVGEKEKTSGTVNI 688 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R + + ++ E I + Sbjct: 689 RTRDNKVHGERTISETIERLQQLKQSR 715 >gi|171742906|ref|ZP_02918713.1| hypothetical protein BIFDEN_02023 [Bifidobacterium dentium ATCC 27678] gi|171278520|gb|EDT46181.1| hypothetical protein BIFDEN_02023 [Bifidobacterium dentium ATCC 27678] Length = 708 Score = 210 bits (534), Expect = 5e-52, Method: Composition-based stats. Identities = 65/459 (14%), Positives = 135/459 (29%), Gaps = 50/459 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L+E RD ++ L + + G+ + P G ++ + RE + Sbjct: 273 KAYQTRLEEAAKRDHRKLGAEMDLFS-FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRK 331 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHE 111 + P + L+ SG Y M + P + Sbjct: 332 HHYSFVQTPHITKGGLYETSGHLHWYKDGMYPAMRLDEEKDENGNIIKQGFDYYLKPMNC 391 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 392 PMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMK 451 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L + GL + + + S + + Sbjct: 452 DEL-KNLLTFVLGLLKDFGLDDFYLELST----------------KDPHKYVGSDEIWEE 494 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + A Y + + D++ +VS ++ F Sbjct: 495 ATNTLAEVAKESGLELVDDPCGAAFYGPKI---SVQARDAIGRTWQVSTIQLD----FNL 547 Query: 291 GTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 ++ + ADG + G++ AV+ + G W V + Sbjct: 548 PERF----KLEYIAADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGV 603 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 + ++ A L + D ++ G + A P +IVG + Sbjct: 604 PVA------DEFAPHLQRFIASLEEETVRCEIDMSDDRFGKKIRNASKSKVPFILIVGEE 657 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 ++++ V + R + ++E N V Sbjct: 658 DMNNNAVSFRFRDGSQLNGVPVDEAKNQIMTVLRKRVQV 696 >gi|330936741|gb|EGH40917.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B] Length = 548 Score = 210 bits (534), Expect = 5e-52, Method: Composition-based stats. Identities = 108/214 (50%), Positives = 150/214 (70%), Gaps = 1/214 (0%) Query: 24 KLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVES 83 +LMLR GMI + + G+Y+WLP+G + L V AI+REE + GA+E+ +P +Q A+LW ES Sbjct: 1 QLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAELWQES 60 Query: 84 GRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDEL 143 GR++ YG E++RL DR+++ GPTHEEV+TD+ R+ + SY+ LP YQIQ KFRDE+ Sbjct: 61 GRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARNELNSYKQLPINLYQIQTKFRDEI 120 Query: 144 RPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG 203 RPRFG+MR REF+MKDAYSF E + +Y++M ++Y IF RLGLK P+ A++G IG Sbjct: 121 RPRFGLMRGREFVMKDAYSFHADHESLQVTYDRMHLAYSNIFTRLGLKFRPVEADNGSIG 180 Query: 204 GDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 G SHEF VLA++GE + S D+ E Sbjct: 181 GAGSHEFHVLAESGEDDIVFSD-GSDYAANIEKA 213 Score = 159 bits (402), Expect = 8e-37, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 112/207 (54%), Gaps = 4/207 (1%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPM 298 D + + P +D+ N D P+ K RGIEVGHIF GTKYS M Sbjct: 341 DDKHYFGVNWERDLPVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGTKYSEAM 400 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 G +GK + MG YGIG RVVAA IE + D GIIW D++APF+I+L+ ++ Sbjct: 401 KCQVLGENGKPVNLAMGCYGIGVSRVVAAAIEQNSDENGIIWNDTLAPFQIALVPLRYET 460 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGE--QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 R+A +K+YA L+ G +V DD + G +FA +L+G P +++V + +++ + Sbjct: 461 DAVREATDKLYADLTAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLAEGNL 520 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFS 443 E K R + +++ +V+++ + + Sbjct: 521 EYKSRTESQPQAIAVADVLSFIQGKVN 547 >gi|289178315|gb|ADC85561.1| Prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis BB-12] Length = 615 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 103/284 (36%), Positives = 154/284 (54%), Gaps = 2/284 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DA++ S KL+ R G I + + GI++WLPLG L+ + +IREE Sbjct: 16 RMSTLFLRTLREDPADADVDSAKLLQRAGYIRKAAPGIWTWLPLGLAVLNKIEDVIREEI 75 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+ P L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 76 NGIGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDM 135 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG + +Y +Y Sbjct: 136 YSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTVDEEGMRQAYMDERGAY 195 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF RL LK +P+ A SGP+GG S EF+ GE + + + + +T + Sbjct: 196 ERIFQRLDLKYVPVFAMSGPMGGSASEEFLAPMPIGEDTFALAPSGKAWNVEALHTPAVE 255 Query: 242 IISLNSIVE--QWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 + + + + P A T D P + + Sbjct: 256 AVDCSQTPDATKRATPNARTIDEMIAFANAEYPREDGRDWQASD 299 Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 2/172 (1%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 RG+E+G +F G KYS + +GK V MG YGIG RV+A + E+ Sbjct: 440 GSGPLSFERGVEIGQVFQLGLKYSEALDLKVLNQNGKTVPVWMGCYGIGVSRVLACIAET 499 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGS 390 HD KG+ WP ++AP ++ ++ D+ +A E++ LS G +V +DD G Sbjct: 500 HHDDKGLAWPMNIAPAQVHVMATG-KDEAAFEAAERLVDELSANGIEVLYDDRRKVSPGV 558 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 +F A+L+G P+ + G V++ +E++ R E++S++ V R Sbjct: 559 KFKDAELIGVPIIAVAGRDTVNNGTIEVRDRDGSNSENISVDSVAQVIVDRV 610 >gi|15616745|ref|NP_239957.1| threonyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11134938|sp|P57225|SYT_BUCAI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|25292947|pir||C84944 threonine-tRNA ligase (EC 6.1.1.3) [imported] - Buchnera sp. (strain APS) gi|10038808|dbj|BAB12843.1| threonyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 642 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 76/441 (17%), Positives = 141/441 (31%), Gaps = 42/441 (9%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 +L L+ RD L L + + S G+ W G + + +R + Sbjct: 235 YLNELE--KRDHRKIGKFLQLY--HMQEESPGMIFWHNKGWIIFNELQNFVRVKLKEYKY 290 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P L +W +SG +D+Y + + P + IF S +KSYR Sbjct: 291 EEVKTPLLIDKLIWKQSGHWDNYKNAIFT-TLSEHREYCIKPMNCPGHVQIFNSRLKSYR 349 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E G+MR R F DA+ F + N ++ Sbjct: 350 DLPIRMAEFGSCHRNEPSGSLHGLMRVRNFTQDDAHIFCTREQVRSE-INDCIKMIYDLY 408 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 K I ++ + P + + + + Sbjct: 409 STFHFKKILVKLSTRPEKR-----------------IGTDSLWNESEKDLSDMLIENHLS 451 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 A Y + L DSL N + ++ FY + S + Sbjct: 452 FEYQSGEGAFYGPKIEFI---LQDSLDRNWQCGTIQLD----FYLPLRLSSF----YINE 500 Query: 306 DGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + V + +G++ ++ G W V IS+ +I + Sbjct: 501 KNEKKVPVIIHRAILGSIERFIGILIEECSGNLPTWLSPVQVVIISITDISSG------Y 554 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++++ + S V + D E+IG + L P +I G K S K+ +++R Sbjct: 555 VKELFKKFSDVNIRIECDLRNEKIGFKIREHTLRRIPYILICGEKESSSKKISVRNRQGH 614 Query: 425 IREDMSLEEVINYASHRFSNN 445 + ++ I Sbjct: 615 NFGMIDVDFFIKKLQKEIITR 635 >gi|296454199|ref|YP_003661342.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. longum JDM301] gi|296183630|gb|ADH00512.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. longum JDM301] Length = 677 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 59/461 (12%), Positives = 129/461 (27%), Gaps = 54/461 (11%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L+E RD ++ L + + G+ + P G ++ + RE + Sbjct: 242 KAYQTRLEEAAKRDHRKLGAEMDLFS-FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRK 300 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHE 111 + P + L+ SG Y M + P + Sbjct: 301 HHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEKDADGNITKPGADYYLKPMNC 360 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 361 PMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMK 420 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L + GL + + + S + + Sbjct: 421 DEL-TSLLTFVLNLLKDFGLTDFYLELST----------------KDPNKYVGSDEIWEE 463 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + A Y + + D++ +VS ++ F Sbjct: 464 ATNTLAEVAKESNLELVDDPCGAAFYGPKI---SVQARDAIGRTWQVSTIQLD----FNL 516 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 ++ + DG + R + IE + + + Sbjct: 517 PERF----QLEYIAKDGT------HQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAP 566 Query: 351 LINIKAHDQVCRDACEKIY---ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + + V + + L D ++ G + A P +IVG Sbjct: 567 VQVLGV--PVADEFAPHLAGFVKSLEDEMVRCEIDYSDDRFGKKIRNASKSKVPFILIVG 624 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 + ++++ V + R + +++ V Sbjct: 625 EEDMNNNAVSFRFRDGSQLNGVPVDKAREQILTVIKKRVQV 665 >gi|300812560|ref|ZP_07092977.1| proline--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496433|gb|EFK31538.1| proline--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 565 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 106/265 (40%), Positives = 145/265 (54%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +F+P L+E P DA SH++MLR G I Q + G+YS+LPLG K L II EE Sbjct: 1 MRQSIFFMPTLKETPADAVAKSHQVMLRGGYIRQVTAGVYSYLPLGYKVLRKTEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G +EM +P + A +W ESGR YG EM RL DR+ + M+ GPTHEE TD+ Sbjct: 61 MANAGVVEMIMPHMLPASMWEESGRLPKYGPEMFRLKDRHGREMLLGPTHEETFTDVVAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF + E ++ + Sbjct: 121 SLKSYKQMPLHLYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAASQEQLDKQFDDEKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+IF R G++ P+ A+SG +GG S EF A GE + + D Sbjct: 181 YLKIFKRTGVEVRPVIADSGTMGGKNSIEFQAPAAVGEDTIATNASGTYAANLEMAVSVD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 ++ D ++ Sbjct: 241 TFKQEPEELKAMEKVATPGCDSIDK 265 Score = 149 bits (376), Expect = 9e-34, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 97/193 (50%), Gaps = 3/193 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A A V NE D + IEVGHIF GT Y+ M A F +GK Sbjct: 376 DFKADRFADLRVANEGEPDPVDHEPLKFTTSIEVGHIFKLGTYYTETMGAKFLDQNGKSQ 435 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V MGSYGIG R+++AV+E G+ WP + PF I +I +K D++ E + A Sbjct: 436 PVIMGSYGIGVTRLLSAVVEQHATENGVAWPKEITPFGIHIIQMKMKDEIQSKLAEDLEA 495 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + DV +DD E+ G +F ADL+G P+++ VG + +D VE+K + ++ Sbjct: 496 KF--AKYDVLYDDRNERPGVKFNDADLVGAPIRITVG-RDAADGIVEVKRPGDDQAQKLA 552 Query: 431 LEEVINYASHRFS 443 + ++ ++ + Sbjct: 553 VTDLEDFIASELD 565 >gi|254692871|ref|NP_001157090.1| threonyl-tRNA synthetase, mitochondrial isoform 3 [Mus musculus] Length = 642 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 83/451 (18%), Positives = 143/451 (31%), Gaps = 57/451 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD + L H+ S G +LP G + + + A IR E R G E+ PTL Sbjct: 224 RDHRRIGKEQELF--FFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKTPTLF 281 Query: 76 SADLWVESGRYDSYGKEMLRLAD----------------RNDKAMIYGPTHEEVMTDIFR 119 S LW +SG ++ Y +M L + P + +F Sbjct: 282 STKLWEQSGHWEHYRADMFSLKPPGTDGVDNSQSGHPARCPKDTLALKPMNCPAHCLMFA 341 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 +S+R LP R E G+ R F DA+ F P + Sbjct: 342 HRPRSWRELPVRLADFGALHRAEASGSLGGLTRLWRFQQDDAHIFCA-PHQLEAEIQGCL 400 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 ++ LG F + T D Sbjct: 401 DFLRCVYSVLGFS------------------FHLALSTRPPGFLGEPRLWDQAEQVLQQA 442 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + + A Y DVH L D+L + ++ F ++ Sbjct: 443 LEKFGEPWDLNPGDGAFYGPKIDVH---LHDALGRPHQCGTIQLD----FQLPLRFD--- 492 Query: 299 SATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 +KG G + V + +G++ + V+ + G WP ++P ++ +I ++ Sbjct: 493 -LQYKGPAGTPECPVLIHRAVLGSVERLLGVLA---ESCGGKWPLWLSPLQVVVIPVRTE 548 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + ++ L G D D G + + A L + Q +VG + S V Sbjct: 549 QE---EYARQVQQCLQAAGLVSDLDADSGLTLSRRVRRAQLAHYNFQFVVGQREQSQRTV 605 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 ++ R + L E + + P Sbjct: 606 NVRTRDNRQLGERDLAESVQRLLELQNARVP 636 >gi|148706886|gb|EDL38833.1| threonyl-tRNA synthetase-like 1 [Mus musculus] Length = 630 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 83/451 (18%), Positives = 143/451 (31%), Gaps = 57/451 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD + L H+ S G +LP G + + + A IR E R G E+ PTL Sbjct: 212 RDHRRIGKEQELF--FFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKTPTLF 269 Query: 76 SADLWVESGRYDSYGKEMLRLAD----------------RNDKAMIYGPTHEEVMTDIFR 119 S LW +SG ++ Y +M L + P + +F Sbjct: 270 STKLWEQSGHWEHYRADMFSLKPPGTDGVDNSQSGHPARCPKDTLALKPMNCPAHCLMFA 329 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 +S+R LP R E G+ R F DA+ F P + Sbjct: 330 HRPRSWRELPVRLADFGALHRAEASGSLGGLTRLWRFQQDDAHIFCA-PHQLEAEIQGCL 388 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 ++ LG F + T D Sbjct: 389 DFLRCVYSVLGFS------------------FHLALSTRPPGFLGEPRLWDQAEQVLQQA 430 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + + A Y DVH L D+L + ++ F ++ Sbjct: 431 LEKFGEPWDLNPGDGAFYGPKIDVH---LHDALGRPHQCGTIQLD----FQLPLRFD--- 480 Query: 299 SATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 +KG G + V + +G++ + V+ + G WP ++P ++ +I ++ Sbjct: 481 -LQYKGPAGTPECPVLIHRAVLGSVERLLGVLA---ESCGGKWPLWLSPLQVVVIPVRTE 536 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + ++ L G D D G + + A L + Q +VG + S V Sbjct: 537 QE---EYARQVQQCLQAAGLVSDLDADSGLTLSRRVRRAQLAHYNFQFVVGQREQSQRTV 593 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 ++ R + L E + + P Sbjct: 594 NVRTRDNRQLGERDLAESVQRLLELQNARVP 624 >gi|254692865|ref|NP_082207.2| threonyl-tRNA synthetase, mitochondrial isoform 1 [Mus musculus] gi|118597388|sp|Q3UQ84|SYTM_MOUSE RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName: Full=Threonine--tRNA ligase; Short=ThrRS; AltName: Full=Threonyl-tRNA synthetase-like 1; Flags: Precursor gi|74216488|dbj|BAE25159.1| unnamed protein product [Mus musculus] gi|187956085|gb|AAI47502.1| Threonyl-tRNA synthetase 2, mitochondrial (putative) [Mus musculus] Length = 723 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 83/451 (18%), Positives = 143/451 (31%), Gaps = 57/451 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD + L H+ S G +LP G + + + A IR E R G E+ PTL Sbjct: 305 RDHRRIGKEQELF--FFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKTPTLF 362 Query: 76 SADLWVESGRYDSYGKEMLRLAD----------------RNDKAMIYGPTHEEVMTDIFR 119 S LW +SG ++ Y +M L + P + +F Sbjct: 363 STKLWEQSGHWEHYRADMFSLKPPGTDGVDNSQSGHPARCPKDTLALKPMNCPAHCLMFA 422 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 +S+R LP R E G+ R F DA+ F P + Sbjct: 423 HRPRSWRELPVRLADFGALHRAEASGSLGGLTRLWRFQQDDAHIFCA-PHQLEAEIQGCL 481 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 ++ LG F + T D Sbjct: 482 DFLRCVYSVLGFS------------------FHLALSTRPPGFLGEPRLWDQAEQVLQQA 523 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + + A Y DVH L D+L + ++ F ++ Sbjct: 524 LEKFGEPWDLNPGDGAFYGPKIDVH---LHDALGRPHQCGTIQLD----FQLPLRFD--- 573 Query: 299 SATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 +KG G + V + +G++ + V+ + G WP ++P ++ +I ++ Sbjct: 574 -LQYKGPAGTPECPVLIHRAVLGSVERLLGVLA---ESCGGKWPLWLSPLQVVVIPVRTE 629 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + ++ L G D D G + + A L + Q +VG + S V Sbjct: 630 QE---EYARQVQQCLQAAGLVSDLDADSGLTLSRRVRRAQLAHYNFQFVVGQREQSQRTV 686 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 ++ R + L E + + P Sbjct: 687 NVRTRDNRQLGERDLAESVQRLLELQNARVP 717 >gi|12847728|dbj|BAB27683.1| unnamed protein product [Mus musculus] Length = 723 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 83/451 (18%), Positives = 143/451 (31%), Gaps = 57/451 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD + L H+ S G +LP G + + + A IR E R G E+ PTL Sbjct: 305 RDHRRIGKEQELF--FFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKTPTLF 362 Query: 76 SADLWVESGRYDSYGKEMLRLAD----------------RNDKAMIYGPTHEEVMTDIFR 119 S LW +SG ++ Y +M L + P + +F Sbjct: 363 STKLWEQSGHWEHYRADMFSLKPPGTDGVDNSQSGHPARCPKDTLALKPMNCPAHCLMFA 422 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 +S+R LP R E G+ R F DA+ F P + Sbjct: 423 HRPRSWRELPVRLADFGALHRAEASGSLGGLTRLWRFQQDDAHIFCA-PHQLEAEIQGCL 481 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 ++ LG F + T D Sbjct: 482 DFLRCVYSVLGFS------------------FHLALSTRPPGFLGEPRLWDQAEQVLQQA 523 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + + A Y DVH L D+L + ++ F ++ Sbjct: 524 LEKFGEPWDLNPGDGAFYGPKIDVH---LHDALGRPHQCGTIQLD----FQLPLRFD--- 573 Query: 299 SATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 +KG G + V + +G++ + V+ + G WP ++P ++ +I ++ Sbjct: 574 -LQYKGPAGTPECPVLIHRAVLGSVERLLGVLA---ESCGGKWPLWLSPLQVVVIPVRTE 629 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + ++ L G D D G + + A L + Q +VG + S V Sbjct: 630 QE---EYARQVQQCLQAAGLVSDLDADSGLTLSRRVRRAQLAHYNFQFVVGQREQSQRTV 686 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 ++ R + L E + + P Sbjct: 687 NVRTRDNRQLGERDLAESVQRLLELQNARVP 717 >gi|303277979|ref|XP_003058283.1| predicted protein [Micromonas pusilla CCMP1545] gi|226460940|gb|EEH58234.1| predicted protein [Micromonas pusilla CCMP1545] Length = 725 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 74/442 (16%), Positives = 150/442 (33%), Gaps = 41/442 (9%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ +Y L I + RD + L S G +LP G +N+ I+E+ Sbjct: 283 MK--EYKLRIEEAKKRDHRVLG--LHQELFFFDILSPGSCFFLPDGATIYNNLINFIKEK 338 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 E+ P + + DLW SG Y + M + P + +F Sbjct: 339 YWEYEYSEVVTPNIYNFDLWKTSGHAAHYKENMFSFNVEKE-EFGLKPMNCPGHCVMFGH 397 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+E G+ R R F DA+ F + N M Sbjct: 398 RKRSFRELPMRLADFGVLHRNEFSGALHGLTRVRRFQQDDAHIFCRPDQMEHELVNFMK- 456 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 +L + + + M+ + P G E A+ + Sbjct: 457 -FLDEVYEVFGLTYEMKLSTRPEGYLGELEVWNQAED-----------------ALRNAL 498 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + A Y D+ +FD+L + + ++ F +++L Sbjct: 499 NKSGKEWKLNPGDGAFYGPKIDI---TVFDALKRRFQCATVQLD----FQLPIRFNLSY- 550 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + + + +G++ + A++ GK W + + + Sbjct: 551 --VTENNEPARPIIIHRAILGSVERMFAILTEHFAGKYPYW------LSPKQVMLVPISE 602 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 R+ ++ +L K G D+ ++ + A L + ++VG ++ V ++ Sbjct: 603 ASREYALEVKKQLRKAGHHAQVDETDRKMQKKVREAQLEHWNYILVVGEGEKTNRTVNVR 662 Query: 420 HRLTGIREDMSLEEVINYASHR 441 R + ++ LEE++ + Sbjct: 663 TRDNVVHGEVKLEELMTVLNEE 684 >gi|325957052|ref|YP_004292464.1| prolyl-tRNA synthetase [Lactobacillus acidophilus 30SC] gi|325333617|gb|ADZ07525.1| prolyl-tRNA synthetase [Lactobacillus acidophilus 30SC] Length = 565 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 109/265 (41%), Positives = 148/265 (55%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SHKLM+R G I Q + G+Y++LPLG + L AII +E Sbjct: 1 MRQSKFFMPTLKEAPSDAVAESHKLMIRGGYIRQVTAGVYAYLPLGYRVLRKAEAIIEQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MDRINVPEMIMPHLLPATLWQESGRYKKYGPEMFKLKDRHGRESLLGPTHEETFTEIIAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T + +N + Sbjct: 121 NLKSYKQMPMALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATRDQLDEQFNDQENA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R G+ P+ A+SG +GG S EF A GE + +++ D Sbjct: 181 YKRIFKRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNENGTYAANLEMAKSID 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 ++ T D + Sbjct: 241 TFKQDPEDPKELTKVSTPDCDTIEK 265 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 64/192 (33%), Positives = 100/192 (52%), Gaps = 2/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A V NE D + IEVGHIF GT Y+ M A F +GK Sbjct: 375 DFKVDEFADLRVANEGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTKTMGADFLDQNGKAQ 434 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V MGSYGIG R+++A +E +G+ WP +APF+I ++ +K + + EK+ Sbjct: 435 PVIMGSYGIGVTRMLSAAVEQHLTERGVAWPKEIAPFEIHIVQMKMNKDDQTELAEKLEK 494 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + S+ DV +DD E+ G +FA ADL+G P+++ +G K +D VE+K +MS Sbjct: 495 KFSEK-YDVLYDDRKERAGVKFADADLVGAPIRITIGKK-AADGIVEVKRPTDAKATEMS 552 Query: 431 LEEVINYASHRF 442 ++E+ + + Sbjct: 553 IDELDKFVNQEL 564 >gi|329767542|ref|ZP_08259065.1| prolyl-tRNA synthetase [Gemella haemolysans M341] gi|328835876|gb|EGF85598.1| prolyl-tRNA synthetase [Gemella haemolysans M341] Length = 566 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 123/411 (29%), Positives = 186/411 (45%), Gaps = 35/411 (8%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S+ F+P +E P AE SHKL+++ GM+ Q S G+Y+ LPL + + + +IREE Sbjct: 1 MRQSRTFIPTTREVPSSAEATSHKLLIKAGMVKQVSAGVYTHLPLATRVIQKIEKVIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P LQS + W +SGR++ G E++R+ DR + PT EE++ + Sbjct: 61 HEKIGAVELLMPILQSDEYWKKSGRWNKMGDELIRVTDRKNAGYALSPTAEEIICQTVSN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ KFRDE+RPR G++R +EF+MKD YSF TPE + +Y + + Sbjct: 121 MVTSYKQLPVNLYQIQTKFRDEIRPRLGLLRCKEFIMKDGYSFHDTPESLRETYKDYYQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--- 237 Y IF R LK ++A+SG IGG +HEF LA+ GE + ++ D+ E Sbjct: 181 YSNIFDRFELKYRAVKADSGNIGGSYTHEFQALAEVGEDTIAYTE-ESDYAANIETAAVV 239 Query: 238 ----------DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL-----PENKRVSARGI 282 + + L + +Q AA V + +L E V RG Sbjct: 240 EQNYTMPTGFEKKERSLLETPNQQTIDDIAAYCGVDVNRAMKALALKADGEFYLVLMRGN 299 Query: 283 EV--GHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW 340 + F T S AT + + V G VI + Sbjct: 300 DQLNDIKFMKATGTSEVEMATEQEIEEVMGGVVGYMGPFGI--KNCKVIGDNAIKYMYNH 357 Query: 341 PDSVAPFKISLINIKAHDQVCRDACE-------KIYARLS-----KVGCDV 379 IN+ D + + LS G +V Sbjct: 358 SCGANKKGFHYINVNPGDYEIDAHYDLRMIEEGDLAEDLSGPIKFAKGIEV 408 Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 65/165 (39%), Positives = 97/165 (58%), Gaps = 1/165 (0%) Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 A+GIEVG +F G YS M T+ A+G+ ++ MG YGIG RV++A+IE Sbjct: 398 GPIKFAKGIEVGQVFELGKGYSESMDITYLDANGRANHFYMGCYGIGVTRVISAIIEQHS 457 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 D KGIIWP VAP+++ L+ + + E++YA+L+ G +V +DD E+ G +F Sbjct: 458 DDKGIIWPKEVAPYQVHLVCVDVKKEEQVKLSEELYAQLTAAGYEVLYDDRAERAGVKFN 517 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 ADL+G PLQV+VG K + VE+K R T + D + +V+ Sbjct: 518 DADLIGIPLQVVVGKK-AGEGIVEVKERKTLEKVDTEVADVLAKV 561 >gi|168334535|ref|ZP_02692696.1| threonyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B'] Length = 635 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 77/447 (17%), Positives = 157/447 (35%), Gaps = 35/447 (7%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD +L L +G+ +P G K + + I + + Sbjct: 208 LTEYLAAVEEAKKRDHNKLGRELKLFAT-DETVGQGLPLIMPKGAKVIQTLQRWIEDLEE 266 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRS 120 G + P + DL+ SG + Y M + +++D+ + P I++ Sbjct: 267 ENGYLLTKTPNMAKNDLYKISGHWSHYKDGMFVMGNEEKDDEIIALRPMTCPFQFMIYKQ 326 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 SYR+LP + + R+E G++R R+F + D + TP+ + + + Sbjct: 327 EQHSYRDLPIRYAETATLARNESSGEMHGLIRVRQFTLADGHIVC-TPDQLETEFKNVVD 385 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 I LG I D+S+ F + + + + + + Sbjct: 386 LIKYIMKTLG------------IDKDISYRFSKWSPEFKEKYIDNPEAWETTETIMKNIL 433 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D + E A Y DV + + + + I+ + + Sbjct: 434 DHLKIDYKEAENEAAFYGPKLDVQFKNVH---GKEDTIITVQIDFAL--------AERFN 482 Query: 300 ATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 T+ ADG+ + +G A++ + +P +AP + ++ I Sbjct: 483 MTYVDADGEKKLPYIIHRSSLGCYERTLAMLI---EKYAGAFPTWLAPTAVKILPISDK- 538 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D ++ A L K V D E+IG + A P V+VG+ + + V + Sbjct: 539 --YADYAAEVAATLRKNKILVEIDQRTEKIGYKIREARNERVPYIVVVGADEMENKTVSV 596 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R G +L+ + ++ Sbjct: 597 RSRQKGEEGVFALDVFAQRVADEIASK 623 >gi|283954167|ref|ZP_06371692.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414] gi|283794446|gb|EFC33190.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414] Length = 568 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 121/358 (33%), Positives = 181/358 (50%), Gaps = 14/358 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 1 MRFTKFYAPSLKEAPKDAILPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 61 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + + M+ + Sbjct: 121 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLEREFELMYQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A SG IGG S EF+VLA GE + ++ D+ E Sbjct: 181 YSQILQRMGLDFRAVEANSGAIGGSGSKEFMVLAKNGEDDILICENC-DYAANVEAA--- 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + E+ A YA+ N K +SL + I F T ++ A Sbjct: 237 KRVKKTCQDERPEANYASKFYTPNIKTIESL----------AQFFKINAFYTIKAVVKKA 286 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 ++ + GS + ++ A + V + I D Sbjct: 287 IYENESKLVVFFIRGSDDLQEVKAQNACNALELVNANEEELEKVGLTPGFIGFIGLKD 344 Score = 159 bits (402), Expect = 9e-37, Method: Composition-based stats. Identities = 66/223 (29%), Positives = 110/223 (49%), Gaps = 6/223 (2%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS---DVHNEKLFDSLPEN--KRVSA 279 ++DF + +E + + D+ K D + K + Sbjct: 346 DFYIDFELENEKQMIMGANEKDYHLVGIDVVNLNKDRFKDLVEVKQGDCCAKCGAKLKQS 405 Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE++HD KG I Sbjct: 406 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGISRLLAVAIEANHDEKGCI 465 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W +APF + +I D+ + K+Y L+K+G +V DD E+ G + +L+G Sbjct: 466 WNKVLAPFVLEIIVSNIKDEKALEFANKLYEDLTKLGLEVLLDDRNERFGVKMNDFELMG 525 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 FP +++G K + +++VE+ R +E + ++E++ + Sbjct: 526 FPYALVIG-KGLENNEVELIQREALTKELVKIDELMEILKKKV 567 >gi|282861434|ref|ZP_06270499.1| prolyl-tRNA synthetase [Streptomyces sp. ACTE] gi|282564092|gb|EFB69629.1| prolyl-tRNA synthetase [Streptomyces sp. ACTE] Length = 566 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 106/263 (40%), Positives = 151/263 (57%), Gaps = 4/263 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE +HKL++R G + + + G++SWLPLG+K L+NV+ ++REE Sbjct: 6 RMSRLMIKTLRDDPADAETLNHKLLVRAGYVRRTAAGLWSWLPLGKKVLENVSRVVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ +P L + + SGRYD YG + RL DR + GPTHEE+ T + + Sbjct: 66 DAIGGQEVLLPALLPKEPYEASGRYDEYGDLLFRLRDRKGAEYLLGPTHEEIFTQVVKDM 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR GV+R REF MKD+YSFD T EG SY +Y Sbjct: 126 CSSYKDLPVILYQIQTKYRDEARPRAGVLRGREFQMKDSYSFDTTDEGLAESYQLHRAAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +RIF RLGL + A SG +GG S EF+ A GE + D+ +E + Sbjct: 186 IRIFERLGLDHRIVSAVSGAMGGSASEEFLAPAPAGEDTFVDCPNC-DYAANTEAVTYVA 244 Query: 242 IISLNS---IVEQWTAPYAATSD 261 + VE+ P T + Sbjct: 245 TPAEAPAAGPVEELDTPDTPTIE 267 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 60/184 (32%), Positives = 89/184 (48%), Gaps = 6/184 (3%) Query: 261 DVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 DV + D P R IE+GHIF G KY+ S G GK V MGSYG Sbjct: 385 DVVVVEPGDPCPRCGTGLQVDRAIEIGHIFQLGRKYADIFSLDVLGQQGKPVRVTMGSYG 444 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R VAA+ E + D KG+ WP VAP + + A + + + +L G Sbjct: 445 IGVSRAVAALAEQTADDKGLCWPREVAPADVH--VVAAGKALQTELALDVSEKLGAAGLR 502 Query: 379 VFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 V DD G G +F ++L+G P ++ G + +E+K R TG RE+++++E + Sbjct: 503 VIVDDRAGVSPGVKFTDSELIGVPKILVAGRRSAE-GVLELKDRRTGEREELTVDEALAR 561 Query: 438 ASHR 441 + + Sbjct: 562 LTDQ 565 >gi|116748707|ref|YP_845394.1| prolyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB] gi|152112959|sp|A0LHQ7|SYP_SYNFM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116697771|gb|ABK16959.1| prolyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB] Length = 581 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 112/286 (39%), Positives = 160/286 (55%), Gaps = 4/286 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKYF+ L E P++AE SH L+LR IH + G+YS LPLG + + + AI+REE Sbjct: 1 MRYSKYFIHTLFEVPKEAETPSHILLLRGCYIHPVAAGVYSLLPLGHRVAEKIKAILREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N +E+++P L A+LW +S RY G+E+ R+ DR D+ + THEEV+TDI R Sbjct: 61 LNAIEGLEVTMPVLNPAELWKKSSRYYDIGQELFRIKDRKDREFVLAMTHEEVITDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR+LP YQIQ K RDE RPR G++R REF M DAYSF Y ++F + Sbjct: 121 FLRSYRHLPVMLYQIQTKIRDEARPRAGLLRVREFFMNDAYSFHPDFADLDAYYPRIFNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD-- 238 YLRIF R GL ++P+ A+SG +GG SHEF++ + GE + D+ +E Sbjct: 181 YLRIFTRCGLTTVPIEADSGIMGGTGSHEFMLESPNGEDRFVVCTQC-DYRANTEKAQGL 239 Query: 239 -FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 S ++ P + + F PE++ + E Sbjct: 240 IPPVKYSGDAPPPMEAVPTPGIKTIADLMRFFDCPEDRLLKTVAYE 285 Score = 146 bits (368), Expect = 7e-33, Method: Composition-based stats. Identities = 67/203 (33%), Positives = 103/203 (50%), Gaps = 5/203 (2%) Query: 248 IVEQWTAPYAAT-SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS--LPMSATFKG 304 +T AA ++V + E RGIE+GH F GTKY+ M AT+ Sbjct: 371 CGRDFTPFDAADLAEVRDGDRCTRCAEGILRIRRGIELGHTFKLGTKYTAAESMDATYLD 430 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 A G V MG YGIG R++A+ +E HD G+ +P S+APF++ L ++ + +A Sbjct: 431 AAGNQQRVVMGCYGIGVERLMASAVEQWHDEGGMSFPYSIAPFQVILCSLGRKPE-ILEA 489 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + +Y RL D +DD E G + ADLLG P++V+V K + +VEIK R TG Sbjct: 490 AQALYERL-GAHYDTIYDDRDESPGVKLKDADLLGVPIRVVVSQKLLQKGEVEIKVRRTG 548 Query: 425 IREDMSLEEVINYASHRFSNNRP 447 + +E++ ++ +P Sbjct: 549 VVIVCPRDELLETLERIVADLQP 571 >gi|320008235|gb|ADW03085.1| prolyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331] Length = 565 Score = 209 bits (533), Expect = 6e-52, Method: Composition-based stats. Identities = 106/261 (40%), Positives = 147/261 (56%), Gaps = 1/261 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE +HKL++R G + + + GI+SWLPLG+K L+NV ++REE Sbjct: 6 RMSRLMIKTLRDDPADAETLNHKLLVRAGYVRRTAAGIWSWLPLGKKVLENVTRVVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ +P L + + SGRYD YG + RL DR + GPTHEE+ T + + Sbjct: 66 DAIGGQEVLLPALLPKEAYEASGRYDEYGDLLFRLQDRKGADYLLGPTHEEIFTQVVKDM 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR GV+R REF MKD+YSFD T EG +Y +Y Sbjct: 126 CSSYKDLPVILYQIQTKYRDEARPRAGVLRGREFQMKDSYSFDTTDEGLAEAYQLHRAAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGET-QVFCSKDFMDFPIPSENTDFD 240 +RIF RLGL + A SG +GG S EF+ A GE V C + Sbjct: 186 IRIFERLGLDHRVVSAVSGAMGGSASEEFLAPAPAGEDTFVDCPNCDYAANTEAVTYKVT 245 Query: 241 DIISLNSIVEQWTAPYAATSD 261 + VE+ P T + Sbjct: 246 AVADAAGAVEELDTPDTPTIE 266 Score = 136 bits (343), Expect = 7e-30, Method: Composition-based stats. Identities = 59/176 (33%), Positives = 87/176 (49%), Gaps = 6/176 (3%) Query: 269 DSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVA 326 D P R IE+GHIF G KY+ S G GK V MGSYGIG R VA Sbjct: 392 DPCPNCGTGLQVDRAIEIGHIFQLGRKYADIFSLDVLGQQGKPVRVTMGSYGIGVSRAVA 451 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-G 385 A+ E + D KG+ WP +AP + + A + + + +L+ G V DD G Sbjct: 452 ALAEQTADDKGLCWPREIAPADVH--VVAAGKALQTELALDVSEKLNAAGLRVLVDDRAG 509 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 G +F ++L+G P ++ G + +E+K R TG RE+++++E I + R Sbjct: 510 VSPGVKFTDSELIGVPKILVAGRRSAE-GVLELKDRRTGEREELTVDEAIARLTDR 564 >gi|239621470|ref|ZP_04664501.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515931|gb|EEQ55798.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 686 Score = 209 bits (533), Expect = 6e-52, Method: Composition-based stats. Identities = 59/461 (12%), Positives = 128/461 (27%), Gaps = 54/461 (11%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L+E RD ++ L + + G+ + P G ++ + RE + Sbjct: 251 KAYQTRLEEAAKRDHRKLGAEMDLFS-FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRK 309 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHE 111 + P + L+ SG Y M + P + Sbjct: 310 HHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEKDADGNITKPGADYYLKPMNC 369 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 370 PMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMK 429 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L + GL + + + S + + Sbjct: 430 DEL-TSLLTFVLNLLKDFGLTDFYLELST----------------KDPNKYVGSDEIWEE 472 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + A Y + + D++ +VS ++ F Sbjct: 473 ATNTLAEVAKESNLELVDDPCGAAFYGPKI---SVQARDAIGRTWQVSTIQLD----FNL 525 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 ++ + DG + R + IE + + + Sbjct: 526 PERF----QLEYIAKDGT------HQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAP 575 Query: 351 LINIKAHDQVCRDACEKIY---ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + + V + + L D ++ G + A P +IVG Sbjct: 576 VQVLGV--PVADEFAPHLAGFVKSLEDEMVRCEIDYSDDRFGKKIRNASKSKVPFILIVG 633 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 + ++++ V + R + ++ V Sbjct: 634 EEDMNNNAVSFRFRDGSQLNGVPVDTAREQILTVIKKRVQV 674 >gi|257076511|ref|ZP_05570872.1| threonyl-tRNA synthetase [Ferroplasma acidarmanus fer1] Length = 668 Score = 209 bits (533), Expect = 6e-52, Method: Composition-based stats. Identities = 71/461 (15%), Positives = 153/461 (33%), Gaps = 38/461 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + L + RD ++ L T ++ + G+ + P G + + ++E ++G Sbjct: 221 FLLRREEAIKRDHRKIGQEMDLFT-FDNERAPGMPFYAPNGAIIRNELINYMKELNEKSG 279 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ +W +SG Y Y +M N P + IF+ + SY Sbjct: 280 WEEVWTAHAFKDIIWKQSGHYYKYKDDMFLFTLPNGDNYGLKPMNCPGHIAIFQRSVYSY 339 Query: 126 RNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R++P + + +R E G+ R R F + D + F + + + + + Sbjct: 340 RDMPVKYSEAGTVYRYEKSGEMGGLTRPRGFTIDDGHGFVREDQIFDETISLLKIIPSIF 399 Query: 185 FHRLGLKSIPMRAESGP-----------IGGDLSHEFIVLADTGETQVFCS--------K 225 LG + I +F++ A + E + Sbjct: 400 KTILGTEEITYDLSVMDKQHPENYLMSYECSSCGEKFMLRAASQEYKCPACGSENLNSDF 459 Query: 226 DFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVG 285 D + +++ + A Y DVH + D+L ++S I+ Sbjct: 460 SMWDNATENLRRALEELKLKYTEYPGEAAFYGPKIDVH---IKDALGRLWQLSTIQIDFF 516 Query: 286 HIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 F Y V + G+ A++ +GK +W + Sbjct: 517 MPANFDLYYIDKNDTKV-------RPVIIHRAIYGSYERFIAILLEHFNGKLPLWLTPLQ 569 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405 + I + + + +I +L + G D I + + + ++ Sbjct: 570 AYIIPV------SEAYNEYATEINKKLREKGIRSKVDISDGTISKKIKLIRTMRPSYILV 623 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 VG K ++++ V +++R RE ++E + + + Sbjct: 624 VGEKELANNSVSVRNRKDKTRE-YGMDEFMGIMAEEIREKK 663 >gi|311064741|ref|YP_003971466.1| prolyl-tRNA synthetase ProS [Bifidobacterium bifidum PRL2010] gi|310867060|gb|ADP36429.1| ProS Prolyl-tRNA synthetase [Bifidobacterium bifidum PRL2010] Length = 616 Score = 209 bits (533), Expect = 6e-52, Method: Composition-based stats. Identities = 100/237 (42%), Positives = 144/237 (60%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DA+ S KL+LR G + + + GI++WLPLG K L+ + AI+REE Sbjct: 17 RMSTMFLRTLREDPADADTDSAKLLLRAGYVRKAAPGIWTWLPLGLKVLNKIEAIVREEI 76 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + GA E+ P L + + + R++ YG+ + RL DR++ + PTHEE+ T + + Sbjct: 77 DGIGAQEVHFPALLPREPYEATHRWEEYGENLFRLKDRHEADYLLAPTHEEMFTLLVKDM 136 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG K +Y +Y Sbjct: 137 YSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTIDEEGMKKAYYDERGAY 196 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 RIF RL LK +P+ A SGP+GG S EF+ GE + + + + T Sbjct: 197 ERIFQRLDLKYVPVFAMSGPMGGSASEEFLAPMAIGEDTFALAPSGKAWNVEALTTP 253 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 58/234 (24%), Positives = 94/234 (40%), Gaps = 4/234 (1%) Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 A E F + + V T + + D P+ Sbjct: 380 AGVAEPVRFFIDAHVAEGTEWIIGGDEAGKHRFHAVYGRDFKADGTVEAVEVRHGDMSPD 439 Query: 274 N--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 RG+E+G +F G KYS + +GK V MG YGIG RV+A + E+ Sbjct: 440 GSGPLSFERGVEIGQVFQLGLKYSKALDLKVLDQNGKTVPVWMGCYGIGVSRVLACIAET 499 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGS 390 HD +G+ W +V + D DA EK+ A L + G +V +DD + G Sbjct: 500 HHDERGLAW-PAVIAPAQVHVVATGKDAAAFDAAEKLVAELEERGIEVIYDDRKKVSPGV 558 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +F A+L+G PL + G V++ +EI++R + + + + + R Sbjct: 559 KFKDAELIGVPLIAVAGRDTVNNGTIEIRNRDSSDSVAVPVADAAQTLASRLDT 612 >gi|111023830|ref|YP_706802.1| threonyl-tRNA synthetase [Rhodococcus jostii RHA1] gi|123339593|sp|Q0S1E2|SYT_RHOSR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|110823360|gb|ABG98644.1| threonine--tRNA ligase [Rhodococcus jostii RHA1] Length = 685 Score = 209 bits (533), Expect = 6e-52, Method: Composition-based stats. Identities = 62/444 (13%), Positives = 127/444 (28%), Gaps = 47/444 (10%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + G+ + P G + R+ G ++ Sbjct: 257 EAERRDHRKLGSELDLFS-FPDELGSGLPVFHPRGGIIRTEMEDYSRKRHVEEGYEFVNT 315 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDIFR 119 P + L+ SG D Y M + + P + + IFR Sbjct: 316 PHITKGHLYEVSGHLDWYRDGMFPAMHIDEELNEDGTVRKPGQDYYLKPMNCPMHNLIFR 375 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 S +SYR LP ++ +R E G+ R R DA+ + + Sbjct: 376 SRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTREQMRDEL-ATTL 434 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L + GL + + + + + Sbjct: 435 QFVLGLLKDYGLDDFYLELST----------------KNPDKFVGDDAVWEEATATLAEV 478 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + A Y + ++ D+L ++S ++ F ++ L Sbjct: 479 AESSGLNLVPDPGGAAFYGPKI---SVQVQDALGRTWQMSTIQLD----FNLPERFDLEY 531 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 +A K V + G++ V+ + G W V I + Sbjct: 532 TA---NDGTKQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPVA------ 582 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + D + RL G D +++ + P ++ G++ V V Sbjct: 583 ETFADHLFDVVKRLKAAGVRAEVDASDDRMQKKIFNNTAQKVPFMLLAGARDVEAGAVSF 642 Query: 419 KHRLTGIREDMSLEEVINYASHRF 442 + R + +++ + + Sbjct: 643 RFRDGTQVNGVPVDDAVRIVTEWI 666 >gi|50364993|ref|YP_053418.1| threonyl-tRNA synthetase [Mesoplasma florum L1] gi|50363549|gb|AAT75534.1| threonyl-tRNA synthetase [Mesoplasma florum L1] Length = 644 Score = 209 bits (533), Expect = 6e-52, Method: Composition-based stats. Identities = 61/435 (14%), Positives = 142/435 (32%), Gaps = 34/435 (7%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD I + L + G H G+ W+P G + + ++E++ I ++ P + Sbjct: 240 RDHRIINKTLKIF-GFDHLVGPGLPLWMPNGTIVKEEIKKYLKEKEWEYDYINVTTPVIG 298 Query: 76 SADLWVESGRYDSYGKEMLRLADR---NDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 + +L+ +SG +D YG++M + + +D+ I P + +++ +SYR+LP Sbjct: 299 TVELYKKSGHWDHYGEDMFQPFNGGSGSDEQFILRPMNCPHHVAVYKQEQRSYRDLPLRI 358 Query: 133 YQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 + L+ R E + + + P+ + + ++ + ++ Sbjct: 359 AEHALQHRYESSGSLTGLERVRAMELTDSHIFVRPDQVEAEFKSIYKLITEVLETFNIQI 418 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 + + + D + D+ Sbjct: 419 DYLSLSLRDPEDK-------------VKYYQDDKMWDEAEAALEKVLQDLNIDYKKCIGE 465 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH-Y 311 A Y D+ ++ + VS ++ F T+ + + Sbjct: 466 AAFYGPKLDI---QIKTAQNHEITVSTIQLD----FLLP----KKFDVTYIDQNQEFKAP 514 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + + IG A + G +W + I + + ++ + Sbjct: 515 IMIHRGLIGTYERFIATLLEQTKGVLPLWLA-----PNQIEIIPVGSEENIEYANEVKKQ 569 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L K D E++ + A P Q+++G + D+ V + + + + L Sbjct: 570 LKKDFIRTHVDLRDERLSYKIRDAQTSKIPYQLVLGDQERKDNSVTYRQYGSEQQTTIKL 629 Query: 432 EEVINYASHRFSNNR 446 E N + N + Sbjct: 630 NEFKNMITDLICNKK 644 >gi|313235460|emb|CBY19737.1| unnamed protein product [Oikopleura dioica] Length = 800 Score = 209 bits (533), Expect = 6e-52, Method: Composition-based stats. Identities = 75/437 (17%), Positives = 149/437 (34%), Gaps = 37/437 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L T S G WLP G + + IR E + G E+ Sbjct: 373 EEAKKRDHRRIGTQQELWT--FDPVSAGSCFWLPRGAVIYNRLQDFIRSEYRKRGFKEVV 430 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + +++LW SG + Y +M D P + +F S ++SY+ LP Sbjct: 431 TPNIFNSELWKTSGHWQHYEDDMFTFK-VEDDKWAMKPMNCPGHCVMFGSRLRSYKELPL 489 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F + R+EL G+ R R F DA+ F + + ++ G Sbjct: 490 RFADFGVLHRNELSGALSGLTRVRRFQQDDAHIFCAREQIEGE-ITAALDFFKFVYDTFG 548 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + P + +V + + NT + + Sbjct: 549 FTFELN-LSTRP-------------EKYLGEVADWDEAEGMLKNALNTFCSTNETKWELN 594 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ K+ D+L +++ ++ F ++ F + ++ Sbjct: 595 PGDGAFYGPKIDI---KILDALKRRHQLATIQLD----FQLPQRF----KLKFVRDNKEE 643 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + +G++ A++ + G WP ++P ++ ++ I + I Sbjct: 644 TPVMIHRAILGSIERCVAILT---ESFGGKWPFWLSPRQVRVVPIGKS---QVPFAQSIA 697 Query: 370 ARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L G + D D + + A L + ++VG K + ++ R Sbjct: 698 NKLFDAGLEAEADPDCADTFNYRIRRAQLEQWNFILVVGDKELEAGTCAVRTRDAQQHGV 757 Query: 429 MSLEEVINYASHRFSNN 445 + ++ V++ N Sbjct: 758 LDVDFVVDELVRLHKNR 774 >gi|266623074|ref|ZP_06116009.1| threonine--tRNA ligase [Clostridium hathewayi DSM 13479] gi|288865169|gb|EFC97467.1| threonine--tRNA ligase [Clostridium hathewayi DSM 13479] Length = 691 Score = 209 bits (533), Expect = 6e-52, Method: Composition-based stats. Identities = 76/435 (17%), Positives = 143/435 (32%), Gaps = 37/435 (8%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD +L L + +G+ +P G K + + I +E+ + G + P + Sbjct: 281 RDHNKLGRELELFAT-VDVIGQGLPLLMPKGAKIIQTLQRWIEDEEEKRGYMRTKTPLMA 339 Query: 76 SADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 DL+V S +D Y + M +++D+ P +++ KSYR+LP + Sbjct: 340 KKDLYVISDHWDHYKEGMFVLGDEEKDDEVFALRPMTCPFQYYVYKQSPKSYRDLPCRYG 399 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 + FR+E G+ R R+F + + + + P+ + + LGL+ Sbjct: 400 ETSTLFRNEDSGEMHGLTRVRQFTISEGH-LVVRPDQLEEEFKGCVDLAKYCLTTLGLEE 458 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 D+++ + + D + DDI + Sbjct: 459 ------------DVTYRMSKWDPEKADHYLGNAEMWDEVEAAMRKILDDIGIEYTEEVGE 506 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + ++ K + I + +F DG Sbjct: 507 AAFYGPKLDIQAKNVY-----GKEDTMITI------QLDMFLAERFDMSFVDKDGTKKRP 555 Query: 313 QM-GSYGIGAMRVVAAVIESSHD-GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + +G A + ++ + D EK+ + Sbjct: 556 YIIHRTSMGCYERTLAWLIEKYEGAFPTWLCPEQVRVLPI-------SEKYHDYAEKVES 608 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L G D+ E+IG + A L P ++VG K D V ++ R G S Sbjct: 609 ELKSNGILATVDERAEKIGYKIREARLAKLPYMLVVGQKEEEDGLVSVRSRFNGDEGQKS 668 Query: 431 LEEVINYASHRFSNN 445 L + I+ S Sbjct: 669 LSDFIDAISREIRTK 683 >gi|295693140|ref|YP_003601750.1| prolyl-tRNA synthetase [Lactobacillus crispatus ST1] gi|295031246|emb|CBL50725.1| Prolyl-tRNA synthetase [Lactobacillus crispatus ST1] Length = 565 Score = 209 bits (533), Expect = 6e-52, Method: Composition-based stats. Identities = 107/265 (40%), Positives = 146/265 (55%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SHKLM+R G I Q + G+Y++LPLG + L II +E Sbjct: 1 MRQSKFFMPTLKEAPSDAVAESHKLMIRGGYIRQVTAGVYAYLPLGYRVLRKAEGIIEQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MDKINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLKDRHGRESLLGPTHEETFTEIIAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T + ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATRDQLDEQFDDQKNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R G+ P+ A+SG +GG S EF A GE + ++ D Sbjct: 181 YKRIFKRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNEKGTYAANLEMAKSID 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 +Q T D + Sbjct: 241 TFKQEPEDAKQLTKVATPGCDTIEK 265 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 99/192 (51%), Gaps = 2/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A NE D + IEVGHIF GT Y+ M A F +GK Sbjct: 375 DFKVDEFADIRTANEGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTKTMGADFLDQNGKAK 434 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V MGSYGIG R+++A +E +G+ WP +APF I ++ +K + + + EK+ Sbjct: 435 PVIMGSYGIGVTRMLSAAVEQHLTERGVAWPKEIAPFAIHIVQMKMNKEDQTELAEKLEK 494 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + S+ DV +DD E+ G +FA ADL+G P+++ +G K +D VE+K +MS Sbjct: 495 KFSEK-YDVLYDDRKERAGVKFADADLVGAPIRITIGKK-AADGIVEVKRPTDNKATEMS 552 Query: 431 LEEVINYASHRF 442 ++E+ + + Sbjct: 553 IDELDKFVNQEL 564 >gi|241888520|ref|ZP_04775828.1| prolyl-tRNA synthetase [Gemella haemolysans ATCC 10379] gi|241864787|gb|EER69161.1| prolyl-tRNA synthetase [Gemella haemolysans ATCC 10379] Length = 572 Score = 209 bits (533), Expect = 6e-52, Method: Composition-based stats. Identities = 124/410 (30%), Positives = 188/410 (45%), Gaps = 35/410 (8%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R+SK F+P +E P AE SHKL+++ GM+ Q S G+Y++LPL + + + +IREE Sbjct: 8 RQSKTFIPTTREVPSSAEAISHKLLIKAGMVKQVSAGVYTYLPLATRVIQKIEKVIREEH 67 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 ++ GA E+ +P LQS + W +SGR+D G+E++R+ DR PT EE+++ + Sbjct: 68 SKIGAAELLMPILQSDEYWKKSGRWDKMGEELIRVTDRKKAGYALSPTAEEIVSQTVNNM 127 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SY+ LP YQIQ KFRDE+RPR G++R +EF+MKDAYSF +PE + +Y + +Y Sbjct: 128 VTSYKQLPMNLYQIQTKFRDEIRPRLGLLRCKEFIMKDAYSFHDSPESLRETYKDYYQAY 187 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT---- 237 IF R LK ++A+SG IGG +HEF LA+ GE + ++ D+ E Sbjct: 188 SSIFDRFELKYRAVQADSGNIGGSYTHEFQALAEVGEDTIVYTE-ESDYSANIETAAVVE 246 Query: 238 ---------DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL-----PENKRVSARGIE 283 + + L + +Q AA V + +L E V RG + Sbjct: 247 QNYTMPTGFEKKERSLLETPDQQSIDDVAAFCGVEVNRAMKALALKADGEFYLVLMRGND 306 Query: 284 V--GHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 F T S AT + + V G VI + Sbjct: 307 QLNDIKFMKATGTSEVEMATEQEIEEVMGSVAGYMGPFGI--KNCKVIGDNAIKYMYNHS 364 Query: 342 DSVAPFKISLINIKAHDQVCRDACE-------KIYARLS-----KVGCDV 379 IN+ D + + LS G +V Sbjct: 365 CGANKKGFHYINVNPGDYEIDAHYDLRMIEEGDLAEDLSGPVKFAKGIEV 414 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 63/165 (38%), Positives = 97/165 (58%), Gaps = 1/165 (0%) Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 A+GIEVG +F G YS M T+ A+G+ ++ MG YGIG R ++A+IE + Sbjct: 404 GPVKFAKGIEVGQVFELGKGYSEAMDVTYLDANGRANHFYMGCYGIGVTRCISAIIEQHN 463 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 D KGIIWP VAP+++ L+ + + +++YA+L+ G +V +DD E+ G +F Sbjct: 464 DEKGIIWPKEVAPYQVHLVCVDVKKEDQVKLSDELYAQLTAAGYEVLYDDRAERAGVKFN 523 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 ADL+G PLQV+VG K + VE+K R T + D + +V+ Sbjct: 524 DADLIGIPLQVVVGKK-AGEGIVEVKERQTLEKVDTQVVDVLAKV 567 >gi|13358098|ref|NP_078372.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170761869|ref|YP_001752619.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171920446|ref|ZP_02690665.2| threonyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|183508529|ref|ZP_02958053.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701866|ref|ZP_02971526.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|13959578|sp|Q9PPV6|SYT_UREPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189083629|sp|B1AJH5|SYT_UREP2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|11271125|pir||H82878 threonyl-tRNA synthetase UU534 [imported] - Ureaplasma urealyticum gi|6899538|gb|AAF30947.1|AE002152_6 threonyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827446|gb|ACA32708.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902899|gb|EDT49188.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|182675966|gb|EDT87871.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701170|gb|EDU19452.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 580 Score = 209 bits (533), Expect = 6e-52, Method: Composition-based stats. Identities = 77/444 (17%), Positives = 159/444 (35%), Gaps = 35/444 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L LQE RD L L T + +G+ WLP G + V I E + + Sbjct: 168 YLKDLQERKERDHRKIGKDLNLFT-FNNLAGQGLPIWLPNGTIIKNQVQKFINEVEFQFN 226 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P L S DL+ SG +D Y + +++ ++ P T ++ + ++SY Sbjct: 227 FDTVITPILGSIDLYKTSGHWDHYKDNIFSPVQIDNEILVLRPMTCPHHTLVYSNELRSY 286 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + + R E G R RE +++D + F + +H F Sbjct: 287 RSLPIRLSEHSILHRYESSGGLTGFERVREMILEDCHVFCR-FDQIEHEVINAFKMIQEA 345 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK-DFMDFPIPSENTDFDDII 243 LG+K+ + D + + + + D Sbjct: 346 QEGLGIKTFEIHLSLN--------------DPNDKEKYYDDPQMWEQSQNVLRKMLKDHN 391 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y D + + L VS ++ F ++ + T+ Sbjct: 392 IPYKEMVGEAAFYGPKIDFQVKTV---LNRIITVSTIQLD----FLLPNRF----NLTYI 440 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + M IG + ++ + I P ++P ++ +I + + + D Sbjct: 441 NESNEQSVPVMIH--IGIIGTYERLLAILLEQTKGILPLWLSPIQVVIIPVNEN--LHTD 496 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK-VEIKHRL 422 +++ +L K D E++ + A + P Q+++G + + ++K V + Sbjct: 497 YVKELNIKLRKHLIRSNVDLRNERLSKKIREAQIQKIPYQIVIGDEEIKNNKMVTYRCYG 556 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 + +S+ + IN ++ + Sbjct: 557 SEKTTTVSITDFINMLENKIRLKK 580 >gi|307721910|ref|YP_003893050.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294] gi|306980003|gb|ADN10038.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294] Length = 602 Score = 209 bits (533), Expect = 6e-52, Method: Composition-based stats. Identities = 63/435 (14%), Positives = 149/435 (34%), Gaps = 40/435 (9%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +++ L T + G WLP G + + +++ + + G + Sbjct: 203 EAEKRDHRKIGNEMKLFT-FREEVGAGFPIWLPAGGRLRARLESLLFKAHRKRGYEPVRG 261 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + +DLW+ SG Y +YG+ M ++ P + ++ + SYR+LP Sbjct: 262 PEMLRSDLWMTSGHYQNYGENM-YFTHIDELEFGVKPMNCVGHIKVYEDELHSYRDLPIK 320 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 +++ + R E G+ R REF DA+ F + + + Sbjct: 321 YFEYGVVHRHEASGALHGLFRVREFTQDDAHIFCRADQIEEQIIEVVDFV---------- 370 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 I ++ ++ T + + + D I E Sbjct: 371 ---------DKIMSTFEFDYKMMISTKPEKAVGDDKVWEISTQALKNAMDKNELAYEIDE 421 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D+ K+ D++ + ++ F ++ + G + Sbjct: 422 GGGAFYGPKIDI---KITDAIGREWQCGTVQLD----FNLPERF----KLEYNGEENDKI 470 Query: 311 YV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + +G+ ++ + + + + I + ++ + + Sbjct: 471 QPVMIHRAILGSFERFIGILTEHY------AGEFPMFVAPTQVAIVPVAETHKEYAKLLS 524 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 +L + D + + + A+ P+ V++G + +++ V I+ R T + ++ Sbjct: 525 DKLIDINADSEIYAKNDSLNKRIRTAEKTRVPMIVVIGDEEIANKTVAIRDRRTREQYNL 584 Query: 430 SLEEVINYASHRFSN 444 S EE + + + Sbjct: 585 SEEEFLKLIQTKINE 599 >gi|104774217|ref|YP_619197.1| prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|122983932|sp|Q1G9P3|SYP_LACDA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|103423298|emb|CAI98139.1| Prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 565 Score = 209 bits (533), Expect = 6e-52, Method: Composition-based stats. Identities = 106/265 (40%), Positives = 145/265 (54%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +F+P L+E P DA SH++MLR G I Q + G+YS+LPLG K L II EE Sbjct: 1 MRQSIFFMPTLKETPADAVAKSHQVMLRGGYIRQVTAGVYSYLPLGYKVLRKTEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G +EM +P + A +W ESGR YG EM RL DR+ + M+ GPTHEE TD+ Sbjct: 61 MANAGVVEMIMPHMLPASMWEESGRLPKYGPEMFRLKDRHGREMLLGPTHEETFTDVVAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF + E ++ + Sbjct: 121 SLKSYKQMPLQLYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAASQEQLDKQFDDEKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+IF R G++ P+ A+SG +GG S EF A GE + + D Sbjct: 181 YLKIFKRTGVEVRPVIADSGTMGGKNSIEFQAPAAVGEDTIATNASGTYAANLEMAVSVD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 ++ D ++ Sbjct: 241 TFKQEPEELKAMEKVATPGCDSIDK 265 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 99/193 (51%), Gaps = 3/193 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A A V NE D + IEVGHIF GT Y+ M A F +GK Sbjct: 376 DFRADRFADLRVANEGEPDPVDHEPLKFTTSIEVGHIFKLGTYYTETMGAKFLDQNGKSQ 435 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V MGSYGIG R+++AV+E G+ WP +APF I +I +K D++ E + A Sbjct: 436 PVIMGSYGIGVTRLLSAVVEQHATENGVAWPKEIAPFGIHIIQMKMKDEIQSKLAEDLEA 495 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + DV +DD E+ G +F ADL+G P+++ VG + +D VE+K + ++ Sbjct: 496 KF--AKYDVLYDDRNERPGVKFNDADLVGAPIRITVG-RDAADGIVEVKRPGDDQAQKLA 552 Query: 431 LEEVINYASHRFS 443 + ++ ++ ++ Sbjct: 553 VADLEDFIANELD 565 >gi|227878822|ref|ZP_03996729.1| prolyl-tRNA synthetase [Lactobacillus crispatus JV-V01] gi|256843344|ref|ZP_05548832.1| prolyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN] gi|256849837|ref|ZP_05555268.1| prolyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US] gi|262046917|ref|ZP_06019877.1| prolyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US] gi|293381211|ref|ZP_06627219.1| prolyl-tRNA synthetase [Lactobacillus crispatus 214-1] gi|312978246|ref|ZP_07789990.1| proline--tRNA ligase [Lactobacillus crispatus CTV-05] gi|227861570|gb|EEJ69182.1| prolyl-tRNA synthetase [Lactobacillus crispatus JV-V01] gi|256614764|gb|EEU19965.1| prolyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN] gi|256713326|gb|EEU28316.1| prolyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US] gi|260572899|gb|EEX29459.1| prolyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US] gi|290922251|gb|EFD99245.1| prolyl-tRNA synthetase [Lactobacillus crispatus 214-1] gi|310894964|gb|EFQ44034.1| proline--tRNA ligase [Lactobacillus crispatus CTV-05] Length = 565 Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats. Identities = 107/265 (40%), Positives = 146/265 (55%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SHKLM+R G I Q + G+Y++LPLG + L II +E Sbjct: 1 MRQSKFFMPTLKEAPSDAVAESHKLMIRGGYIRQVTAGVYAYLPLGYRVLRKAEGIIEQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MDKINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLKDRHGRESLLGPTHEETFTEIIAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T + ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATRDQLDEQFDDQKNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R G+ P+ A+SG +GG S EF A GE + ++ D Sbjct: 181 YKRIFKRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNEKGTYAANLEMAKSID 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 +Q T D + Sbjct: 241 TFKQEPEDAKQLTKVATPGCDTIEK 265 Score = 146 bits (368), Expect = 8e-33, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 99/192 (51%), Gaps = 2/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A NE D + IEVGHIF GT Y+ M A F +GK Sbjct: 375 DFKVDEFADIRTANEGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTKTMGADFLDQNGKAK 434 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V MGSYGIG R+++A +E +G+ WP +APF I ++ +K + + + EK+ Sbjct: 435 PVIMGSYGIGVTRMLSAAVEQHLTERGVAWPKEIAPFAIHIVQMKMNKEDQTELAEKLEK 494 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + S+ DV +DD E+ G +FA ADL+G P+++ +G K +D VE+K +MS Sbjct: 495 KFSEK-YDVLYDDRKERAGVKFADADLVGAPIRITIGKK-AADGIVEVKRPTDDKATEMS 552 Query: 431 LEEVINYASHRF 442 ++E+ + + Sbjct: 553 IDELDKFVNQEL 564 >gi|257387444|ref|YP_003177217.1| threonyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286] gi|257169751|gb|ACV47510.1| threonyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286] Length = 640 Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats. Identities = 77/446 (17%), Positives = 143/446 (32%), Gaps = 46/446 (10%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNR 63 +Y + RD ++ L + I + G+ + P G+ L+ ++ + + Sbjct: 230 EYLERRQKAKERDHRKIGQEMDLFS--IDETTGPGLPLYEPNGKTVLNELSEYVADLNRE 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + +LW +SG YD+Y +M L D ND+ P + IF Sbjct: 288 AGYDEVETPHVFRTELWKKSGHYDNYVDDMF-LLDVNDEEYGLKPMNCPGHATIFDQKSW 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP +++ +R E R G+ R+ F + D + F + + + Sbjct: 347 SYRDLPIRYFEDGKVYRKEQRGELSGLSRTWSFTIDDGHLFVRPDQIEAE--VLSIMDII 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ + P S E + + Sbjct: 405 LDILDTFSLDYTVQFATRPEKSTGSDE-----------------IWEKAESQLEAVLEQE 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + E A Y D E D+L + ++ F ++ T+ Sbjct: 448 GIDYVVEEGDGAFYGPKIDFAFE---DALGRHWDGPTVQLD----FNMPDRFD----LTY 496 Query: 303 KGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G D +DH M + R +IE + Sbjct: 497 TGEDNEDHRPVMIHRALYGSYERFFMVLIEHYNGKFPPWLAPEQVRILPV-------SDD 549 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D CE+I A L V +D +G + VA P +++G + + ++ Sbjct: 550 NIDYCEEIAAELDD--FRVEIEDRSWTVGKKIQVAHDDKVPYMMVIGDDEEAAGTISVRD 607 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R +D+ L + + R Sbjct: 608 RKEREEKDLELADFEQHLEREVEQKR 633 >gi|116514305|ref|YP_813211.1| prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122274963|sp|Q049U9|SYP_LACDB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116093620|gb|ABJ58773.1| Prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325126002|gb|ADY85332.1| Prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 565 Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats. Identities = 106/265 (40%), Positives = 145/265 (54%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +F+P L+E P DA SH++MLR G I Q + G+YS+LPLG K L II EE Sbjct: 1 MRQSIFFMPTLKETPADAVAKSHQVMLRGGYIRQVTAGVYSYLPLGYKVLRKTEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G +EM +P + A +W ESGR YG EM RL DR+ + M+ GPTHEE TD+ Sbjct: 61 MANAGVVEMIMPHMLPASMWEESGRLPKYGPEMFRLKDRHGREMLLGPTHEETFTDVVAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF + E ++ + Sbjct: 121 SLKSYKQMPLQLYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAASQEQLDKQFDDEKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+IF R G++ P+ A+SG +GG S EF A GE + + D Sbjct: 181 YLKIFKRTGVEVRPVIADSGTMGGKNSIEFQAPAAVGEDTIATNASGTYAANLEMAVSVD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 ++ D ++ Sbjct: 241 TFKQEPEELKAMEKVATPGCDSIDK 265 Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 99/193 (51%), Gaps = 3/193 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A A V NE D + IEVGHIF GT Y+ M A F +GK Sbjct: 376 DFKADRFADLRVANEGEPDPVDHEPLKFTTSIEVGHIFKLGTYYTETMGAKFLDQNGKSQ 435 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V MGSYGIG R+++AV+E G+ WP +APF I +I +K D++ E + A Sbjct: 436 PVIMGSYGIGVTRLLSAVVEQHATENGVAWPKEIAPFGIHIIQMKMKDEIQSKLAEDLEA 495 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + DV +DD E+ G +F ADL+G P+++ VG + +D VE+K + ++ Sbjct: 496 KF--AKYDVLYDDRNERPGVKFNDADLVGAPIRITVG-RDAADGIVEVKRPGDDQAQKLA 552 Query: 431 LEEVINYASHRFS 443 + ++ ++ ++ Sbjct: 553 VADLEDFIANELD 565 >gi|313246933|emb|CBY35782.1| unnamed protein product [Oikopleura dioica] Length = 800 Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats. Identities = 75/437 (17%), Positives = 149/437 (34%), Gaps = 37/437 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L T S G WLP G + + IR E + G E+ Sbjct: 373 EEAKKRDHRRIGTQQELWT--FDPVSAGSCFWLPRGAVIYNRLQDFIRSEYRKRGFKEVV 430 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + +++LW SG + Y +M D P + +F S ++SY+ LP Sbjct: 431 TPNIFNSELWKTSGHWQHYEDDMFTFK-VEDDKWAMKPMNCPGHCVMFGSRLRSYKELPL 489 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F + R+EL G+ R R F DA+ F + + ++ G Sbjct: 490 RFADFGVLHRNELSGALSGLTRVRRFQQDDAHIFCAREQIEGE-ITAALDFFKFVYDTFG 548 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + P + +V + + NT + + Sbjct: 549 FTFELN-LSTRP-------------EKYLGEVADWDEAEGMLKNALNTFCSTNETKWELN 594 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ K+ D+L +++ ++ F ++ F + ++ Sbjct: 595 PGDGAFYGPKIDI---KILDALKRRHQLATIQLD----FQLPQRF----KLKFVRDNKEE 643 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + +G++ A++ + G WP ++P ++ ++ I + I Sbjct: 644 TPVMIHRAILGSIERCVAILT---ESFGGKWPFWLSPRQVRVVPIGKS---QVPFAQSIA 697 Query: 370 ARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 +L G + D D + + A L + ++VG K + ++ R Sbjct: 698 NKLFDAGLEAEADPDCADTFNYRIRRAQLEQWNFILVVGDKELEAGTCAVRTRDAQQHGV 757 Query: 429 MSLEEVINYASHRFSNN 445 + ++ V++ N Sbjct: 758 LHVDFVVDELVRLHKNR 774 >gi|23465302|ref|NP_695905.1| threonyl-tRNA synthetase [Bifidobacterium longum NCC2705] gi|227547263|ref|ZP_03977312.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|317483234|ref|ZP_07942229.1| threonyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA] gi|73919773|sp|Q8G6C2|SYT_BIFLO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|23325940|gb|AAN24541.1| threonyl-tRNA synthetase [Bifidobacterium longum NCC2705] gi|227212222|gb|EEI80118.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|316915303|gb|EFV36730.1| threonyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA] Length = 677 Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats. Identities = 59/461 (12%), Positives = 128/461 (27%), Gaps = 54/461 (11%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L+E RD ++ L + + G+ + P G ++ + RE + Sbjct: 242 KAYQTRLEEAAKRDHRKLGAEMDLFS-FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRK 300 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHE 111 + P + L+ SG Y M + P + Sbjct: 301 HHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEKDADGNITKPGADYYLKPMNC 360 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 361 PMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMK 420 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L + GL + + + S + + Sbjct: 421 DEL-TSLLTFVLNLLKDFGLTDFYLELST----------------KDPNKYVGSDEIWEE 463 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + A Y + + D++ +VS ++ F Sbjct: 464 ATNTLAEVAKESNLELVDDPCGAAFYGPKI---SVQARDAIGRTWQVSTIQLD----FNL 516 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 ++ + DG + R + IE + + + Sbjct: 517 PERF----QLEYIAKDGT------HQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAP 566 Query: 351 LINIKAHDQVCRDACEKIY---ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + + V + + L D ++ G + A P +IVG Sbjct: 567 VQVLGV--PVADEFAPHLAGFVKSLEDEMVRCEIDYSDDRFGKKIRNASKSKVPFILIVG 624 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 + ++++ V + R + ++ V Sbjct: 625 EEDMNNNAVSFRFRDGSQLNGVPVDTAREQILTVIKKRVQV 665 >gi|322691278|ref|YP_004220848.1| threonyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217] gi|320456134|dbj|BAJ66756.1| threonyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217] Length = 677 Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats. Identities = 59/461 (12%), Positives = 128/461 (27%), Gaps = 54/461 (11%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L+E RD ++ L + + G+ + P G ++ + RE + Sbjct: 242 KAYQTRLEEAAKRDHRKLGAEMDLFS-FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRK 300 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHE 111 + P + L+ SG Y M + P + Sbjct: 301 HHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEKDVDGNITKPGADYYLKPMNC 360 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 361 PMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMK 420 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L + GL + + + S + + Sbjct: 421 DEL-TSLLTFVLNLLKDFGLTDFYLELST----------------KDPNKYVGSDEIWEE 463 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + A Y + + D++ +VS ++ F Sbjct: 464 ATNTLAEVAKESNLELVDDPCGAAFYGPKI---SVQARDAIGRTWQVSTIQLD----FNL 516 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 ++ + DG + R + IE + + + Sbjct: 517 PERF----QLEYIAKDGT------HQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAP 566 Query: 351 LINIKAHDQVCRDACEKIY---ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + + V + + L D ++ G + A P +IVG Sbjct: 567 VQVLGV--PVADEFAPHLAGFVKSLEDEMVRCEIDYSDDRFGKKIRNASKSKVPFILIVG 624 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 + ++++ V + R + ++ V Sbjct: 625 EEDMNNNAVSFRFRDGSQLNGVPVDTAREQILTVIKKRVQV 665 >gi|291277001|ref|YP_003516773.1| threonyl-tRNA synthetase [Helicobacter mustelae 12198] gi|290964195|emb|CBG40041.1| threonyl-tRNA synthetase [Helicobacter mustelae 12198] Length = 603 Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats. Identities = 67/441 (15%), Positives = 144/441 (32%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD ++ L T + G+ WLP G + + ++ + Sbjct: 198 YLHQIEEAKKRDHRKLGVEMGLFT-FDEEVGAGLPIWLPNGARLRRRIEELLTKALMIRD 256 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P L + +W SG +D+YG+ M ++ P + +++S ++SY Sbjct: 257 YEPVRGPELLKSSVWKTSGHFDNYGENM-YFTTIDEVEYGLKPMNCVGHIKVYQSSVRSY 315 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP FY+ + R E G++R REF DA+ F P K + + +I Sbjct: 316 RELPLRFYEYGIVHRHEKSGVLHGLLRVREFTQDDAHIFCR-PTQIKTEVSNIIAFTDKI 374 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G A T + + + + Sbjct: 375 MQAFGFCYEMELA------------------TRPQKSIGQDAVWEVATQALIDALQENHI 416 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D++ + I++ + + Sbjct: 417 HYKIDEGGGAFYGPKIDI---KITDAIGRKWQCGTIQIDMNLP--------ERFALEYID 465 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ +A++ + + + + Sbjct: 466 ENNTAQQPVMIHRAILGSFERFSAILTEHFG------GEFPFFIAPVQVVLIPITESQHQ 519 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 + + ++ +G + E + + A+ P+ +++G K + + I+ R Sbjct: 520 YAQSLRKKIIALGAYAEVMNKNETLNKKIRNAEKQHVPMILVIGQKEQNSGTLAIRDRRE 579 Query: 424 GIREDMSLEEVINYASHRFSN 444 + +M EE ++ + Sbjct: 580 KSQYEMKEEEFLHMVEQKMKE 600 >gi|313124034|ref|YP_004034293.1| prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280597|gb|ADQ61316.1| Prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 565 Score = 209 bits (532), Expect = 7e-52, Method: Composition-based stats. Identities = 105/265 (39%), Positives = 145/265 (54%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +F+P L+E P DA SH++MLR G I Q + G+YS+LPLG K L II EE Sbjct: 1 MRQSIFFMPTLKETPADAVAKSHQVMLRGGYIRQVTAGVYSYLPLGYKVLRKTEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G +EM +P + + +W ESGR YG EM RL DR+ + M+ GPTHEE TD+ Sbjct: 61 MANAGVVEMIMPHMLPSSMWEESGRLPKYGPEMFRLKDRHGREMLLGPTHEETFTDVVAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF + E ++ + Sbjct: 121 SLKSYKQMPLHLYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAASQEQLDKQFDNEKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YL+IF R G++ P+ A+SG +GG S EF A GE + + D Sbjct: 181 YLKIFKRTGVEVRPVIADSGTMGGKNSIEFQAPAAVGEDTIATNASGTYAANLEMAVSVD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 ++ D ++ Sbjct: 241 TFKQEPEELKAMEKVATPGCDSIDK 265 Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 99/193 (51%), Gaps = 3/193 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A A V NE D + IEVGHIF GT Y+ M A F +GK Sbjct: 376 DFKADRFADLRVANEGEPDPVDHEPLKFTTSIEVGHIFKLGTYYTETMGAKFLDQNGKSQ 435 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V MGSYGIG R+++AV+E G+ WP +APF I +I +K D++ E + A Sbjct: 436 PVIMGSYGIGVTRLLSAVVEQHATENGVAWPKEIAPFGIHIIQMKMKDEIQSKLAEDLEA 495 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + DV +DD E+ G +F ADL+G P+++ VG + +D VE+K + ++ Sbjct: 496 KF--AKYDVLYDDRNERPGVKFNDADLVGAPIRITVG-RDAADGIVEVKRPGDDQAQKLA 552 Query: 431 LEEVINYASHRFS 443 + ++ ++ ++ Sbjct: 553 VADLEDFIANELD 565 >gi|290890493|ref|ZP_06553568.1| hypothetical protein AWRIB429_0958 [Oenococcus oeni AWRIB429] gi|290479889|gb|EFD88538.1| hypothetical protein AWRIB429_0958 [Oenococcus oeni AWRIB429] Length = 570 Score = 209 bits (532), Expect = 7e-52, Method: Composition-based stats. Identities = 107/250 (42%), Positives = 152/250 (60%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P +E P +A++ SH MLR G I Q + GIY++LPL + ++ + +IIREE Sbjct: 1 MKQSKIFIPTEKEVPAEAQVKSHIFMLRAGFIRQVAGGIYAYLPLANRIINKIESIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R A EM +P + A+LW ESGR+ +YG +M +L DR+D+ I PTHEE T I Sbjct: 61 MSRIDANEMLMPEMIPAELWKESGRFYTYGPQMYQLKDRHDREFIMAPTHEETFTKIISD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ KFRDELRP+ G++R REF+MKDAYSF +G +Y+ + + Sbjct: 121 EIKSYKKLPLILYQIQQKFRDELRPKNGLLRGREFIMKDAYSFSSDQKGLDDAYDLIESA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R+GL + A+SG +GG S EF +A TGE + S +F Sbjct: 181 YKRIFDRVGLDYREIIADSGSMGGKDSAEFQAIAATGEDIIAYSNSGKYAANIEMAEEFF 240 Query: 241 DIISLNSIVE 250 + + + Sbjct: 241 EKKIPDEDKK 250 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 61/175 (34%), Positives = 98/175 (56%), Gaps = 1/175 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 + K V +GIE+GHIF GT Y+ M + GK + MG YGIG R+++A+ E Sbjct: 397 GKGKLVFTKGIEIGHIFKLGTFYTSKMGGQIQNEKGKLSDIIMGCYGIGISRLLSAIAEQ 456 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 S+D KG IWP +VAPF + LI + ++ + ++I L + G +V DD E+ G + Sbjct: 457 SNDPKGFIWPKAVAPFNVHLITMNTKNESQVNLAKQIDKNLQEAGFEVLVDDRKERPGVK 516 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 FA +DL+G P++V+VG + VE+K R D+S + +I + + + + Sbjct: 517 FADSDLIGIPIRVVVGRQ-ADQQIVEVKARGQESTNDVSTDNLIAFLKDKLNELK 570 >gi|193661987|ref|XP_001946406.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like [Acyrthosiphon pisum] Length = 433 Score = 209 bits (532), Expect = 7e-52, Method: Composition-based stats. Identities = 140/426 (32%), Positives = 208/426 (48%), Gaps = 32/426 (7%) Query: 22 SHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWV 81 S KLML G+I Q + G+Y LPL Q++LD + II + GA ++S+P L ++LW Sbjct: 29 SQKLMLELGIIRQSANGLYHLLPLAQRSLDKLIFIINKNMMDIGAQKISMPVLIHSNLWK 88 Query: 82 ESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRD 141 ++GR + +++ + DR K + PTHEEV+TD+F S K+Y+ LP YQ+ KFRD Sbjct: 89 KTGRLNKNIEDLYLVNDRKSKEFLLSPTHEEVVTDLFSSDPKTYKQLPLMLYQVGTKFRD 148 Query: 142 ELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 E+RP+ G++RS+EFLMKD YSFD + +YNK+ +Y +IF +G+K I + SG Sbjct: 149 EIRPKLGIIRSKEFLMKDLYSFDRDQTSATFTYNKVCQAYEKIFKHIGVKFIRVEGASGM 208 Query: 202 IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSD 261 +GG+ SHEF A+ G+ + K Sbjct: 209 MGGNQSHEFHYPAEVGDDTLLQCKKC--------------------------GFGMNKEM 242 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGA 321 + IEVGH F+ GT YS +SAT+ DG M SYG+G Sbjct: 243 SPESVQCPKCSSTDIEFTKAIEVGHTFHLGTFYSSALSATYSDTDGTMKPPYMCSYGLGV 302 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH---DQVCRDACEKIYARLSKV-GC 377 R++ A +E I WP S++PF I +I K + + +Y +++ G Sbjct: 303 SRIIGASVECLSTQDVIQWPRSISPFTICIIPAKEGSIEENASLNNVHSLYNHFTEIFGD 362 Query: 378 DVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKV-EIKHRLTGIREDMSLEEVI 435 D+ DD IG + A LGFP V++G K + E+ T E L +I Sbjct: 363 DIIVDDRTHMTIGKRLIEAKKLGFPFVVVMGKKMNETPSLYELYEANTNKSEHYELSNLI 422 Query: 436 NYASHR 441 NY + Sbjct: 423 NYLKQQ 428 >gi|118462301|ref|YP_882672.1| threonyl-tRNA synthetase [Mycobacterium avium 104] gi|254775941|ref|ZP_05217457.1| threonyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC 25291] gi|166225462|sp|A0QID4|SYT_MYCA1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|118163588|gb|ABK64485.1| threonyl-tRNA synthetase [Mycobacterium avium 104] Length = 684 Score = 209 bits (532), Expect = 7e-52, Method: Composition-based stats. Identities = 68/452 (15%), Positives = 141/452 (31%), Gaps = 48/452 (10%) Query: 8 LPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +++E R D +L L + + G+ + P G + R + G Sbjct: 251 LRLIEEAQRRDHRKLGSELDLFS-FPDEIGSGLAVFHPRGGVVRRELEEYSRRKHIEAGY 309 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVM 114 ++ P + A L+ SG D Y M + + P + + Sbjct: 310 EFVNTPHITKAQLFHTSGHLDWYADGMFPPMHLDAEYDDDGTVRKPGQDYYLKPMNCPMH 369 Query: 115 TDIFRSHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHS 173 T I+RS +SYR LP ++ +R E G+ R+R F M D++ F + Sbjct: 370 TLIYRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTMDDSHIFCTREQLHGEL 429 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 + L + GL + + + S + + Sbjct: 430 -ASLLRFVLELLGDYGLTDFYLELST----------------KDPDKFVGSDEMWEQATT 472 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 S + A Y + + D+L + ++S ++ F F + Sbjct: 473 SLADVAAESGLELVPDPGGAAFYGPKI---SVQARDALGRSWQMSTIQVD----FNFPER 525 Query: 294 YSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 + L +A+ + V + G++ ++ + G W V I + Sbjct: 526 FELEYTAS---DGTRQRPVMIHRALFGSIERFFGILTEHYAGAFPAWLAPVQAVGIPVA- 581 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 E + A+L G V D +++ + P ++ G + V+ Sbjct: 582 -----DEHVPYLESVAAQLKSHGVRVEVDASDDRMAKKIVHHTAQKVPFMLLAGDRDVAA 636 Query: 414 SKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + + + ++ ++ Sbjct: 637 GAVSFRFGDRTQINGVPRDSAVDAIVKWIADR 668 >gi|309782526|ref|ZP_07677250.1| threonine--tRNA ligase [Ralstonia sp. 5_7_47FAA] gi|308918863|gb|EFP64536.1| threonine--tRNA ligase [Ralstonia sp. 5_7_47FAA] Length = 580 Score = 209 bits (532), Expect = 7e-52, Method: Composition-based stats. Identities = 69/388 (17%), Positives = 125/388 (32%), Gaps = 41/388 (10%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L I ++S G W P G + +R G Sbjct: 231 YLHMLEEAEKRDHRKLGRELDLF--HIDEYSPGTVFWHPKGWTLWQEIEQYMRRVYRENG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + LW ++G +D Y + M + + + P + I++ IKSY Sbjct: 289 YQEVKGPQILDKTLWEKTGHWDKYRENMF-ITESEKREYALKPMNCPGHILIYKQGIKSY 347 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP F + R+E G+MR R F D + F T + + ++ Sbjct: 348 RDLPLRFGEFGACHRNEPSGGLHGIMRVRGFTQDDGHIFC-TEDMIQAEVTAFTTLLQKV 406 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I + + P + E D + Sbjct: 407 YKDFGFTEILYKLSTRPDKRIGTEE-----------------SWDRAEAALAEGLRASGC 449 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y + L D+L + ++ + A F G Sbjct: 450 EFEYLPGEGAFYGPKIEY---VLKDALGRQWQCGTIQVDPNLP--------ERLDAEFVG 498 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG H + +G++ ++ + G W + + + + Sbjct: 499 EDGARHRPIMLHRAIVGSLERFIGILIEQYAGALPTW------LSPVQVAVLSITDSHAE 552 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 + + L K G D E+IG + Sbjct: 553 YAQSVAQSLQKQGFRAVVDLRNEKIGYK 580 >gi|323142407|ref|ZP_08077233.1| threonine--tRNA ligase [Phascolarctobacterium sp. YIT 12067] gi|322413100|gb|EFY03993.1| threonine--tRNA ligase [Phascolarctobacterium sp. YIT 12067] Length = 597 Score = 209 bits (532), Expect = 7e-52, Method: Composition-based stats. Identities = 72/446 (16%), Positives = 142/446 (31%), Gaps = 37/446 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + RD L T + +G+ LP G + + + + + + + G Sbjct: 180 YLEQQAEALKRDHNKLGRDLEYFTT-VDYIGQGLPILLPKGARVIQLLQRWVEDVEQKRG 238 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK---AMIYGPTHEEVMTDIFRSHI 122 + P + DL+ SG +D Y M L D +D+ P +F + Sbjct: 239 YLLTKTPLMAKRDLYRISGHWDHYLDGMFILGDPHDETKECFALRPMTCPFQYQVFLNRQ 298 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR LP + FR+E G++R R+F + + + L P+ + + Sbjct: 299 RSYRELPMRLGETSTLFRNEDSGEMHGLIRVRQFTISEGHLI-LRPDQLEEEFKGCLDLA 357 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPSENTDFD 240 E+ + + F + + + D + D Sbjct: 358 KYC------------LETVGMLDKCTFRFSQWNPANPNNKYEGTAEQWDHAQAAMKKILD 405 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D+ + A Y D+ +F + + I++ FG Sbjct: 406 DLGVNYEVGFDEAAFYGPKLDIQFHNVF---GKEDTIVTIQIDMLLAEKFG--------M 454 Query: 301 TFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + +G+ + +G A + ++ G W + + Sbjct: 455 YYVDENGEKKLPYIIHRTSLGCYERTLAYLIETYAGALPTWMAPEQVRFLPVT------D 508 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D C ++ +L G D E+IG + L P ++VG + + ++ V + Sbjct: 509 RAVDYCYELAHKLEANGYRATVDARNEKIGKKIREGQLEKIPYMLVVGDRDMENNTVSPR 568 Query: 420 HRLTGIREDMSLEEVINYASHRFSNN 445 +R G MS E + Sbjct: 569 NRTEGDMGAMSFEAFEAILKDVVDSK 594 >gi|46191233|ref|ZP_00120366.2| COG0441: Threonyl-tRNA synthetase [Bifidobacterium longum DJO10A] gi|189439311|ref|YP_001954392.1| threonyl-tRNA synthetase [Bifidobacterium longum DJO10A] gi|238692055|sp|B3DRX5|SYT_BIFLD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189427746|gb|ACD97894.1| Threonyl-tRNA synthetase [Bifidobacterium longum DJO10A] Length = 677 Score = 209 bits (532), Expect = 7e-52, Method: Composition-based stats. Identities = 59/461 (12%), Positives = 128/461 (27%), Gaps = 54/461 (11%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L+E RD ++ L + + G+ + P G ++ + RE + Sbjct: 242 KAYQTRLEEAAKRDHRKLGAEMDLFS-FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRK 300 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHE 111 + P + L+ SG Y M + P + Sbjct: 301 HHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEKDADGNITKPGADYYLKPMNC 360 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 361 PMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMK 420 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L + GL + + + S + + Sbjct: 421 DEL-TSLLTFVLNLLKDFGLTDFYLELST----------------KDPNKYVGSDEIWEE 463 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + A Y + + D++ +VS ++ F Sbjct: 464 ATNTLAEVAKESNLELVDDPCGAAFYGPKI---SVQARDAIGRTWQVSTIQLD----FNL 516 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 ++ + DG + R + IE + + + Sbjct: 517 PERF----QLEYIAKDGT------HQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAP 566 Query: 351 LINIKAHDQVCRDACEKIY---ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + + V + + L D ++ G + A P +IVG Sbjct: 567 VQVLGV--PVADEFAPHLAGFVKSLEDEMVRCEIDYSDDRFGKKIRNASKSKVPFILIVG 624 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 + ++++ V + R + ++ V Sbjct: 625 EEDMNNNAVSFRFRDGSQLNGVPVDTAREQILTVIKKRVQV 665 >gi|73981325|ref|XP_850160.1| PREDICTED: similar to threonyl-tRNA synthetase-like 1 isoform 2 [Canis familiaris] Length = 721 Score = 209 bits (532), Expect = 7e-52, Method: Composition-based stats. Identities = 89/460 (19%), Positives = 153/460 (33%), Gaps = 58/460 (12%) Query: 8 LPILQENPRDAEIASHKLMLRT---GMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 L +E +AE+ H+ + + H+ S G +LP G + + + A IR E R Sbjct: 290 LRAWEEWKGEAELRDHRRIGKAQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYTRR 349 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEML----------------RLADRNDKAMIYGP 108 G E+ PTL SA LW SG ++ Y ++M + + P Sbjct: 350 GFSEVKTPTLFSAKLWELSGHWEHYQEDMFVLQPPGSDRLASSLSVCSTSHSTDTLALKP 409 Query: 109 THEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTP 167 + +F +S+R LP + R E G+ R R F DA+ F P Sbjct: 410 MNCPAHCLMFAHRPRSWRELPLRLADFGVLHRAEASGSLGGLTRLRCFQQDDAHIFCA-P 468 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 + + ++ LG + P G Sbjct: 469 DQLEEEIQGCLDFLRSVYAVLGFSFRLA-LSTRPSGF-----------------LGESCL 510 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 D ++ + A Y DVH L D+L + ++ Sbjct: 511 WDQAEQVLQRALEEFGEPWDLKPGDGAFYGPKIDVH---LHDALGRPHQCGTIQLD---- 563 Query: 288 FYFGTKYSLPMSATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAP 346 F ++ +KG G + V + +G++ + V+ + G WP ++P Sbjct: 564 FQLPLRFD----LQYKGQAGVLERPVLIHRAVLGSVERMLGVLA---ESYGGKWPLWLSP 616 Query: 347 FKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVI 405 F++ +I + + + RL G D D G + + A L + Q + Sbjct: 617 FQVVVIPVG---AEQEEYAREAQQRLQAAGLVCDLDADSGLTLSRRVRRAQLAHYNFQFV 673 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 VG K S V I+ R + L E + + Sbjct: 674 VGQKEQSKKTVNIRTRDNRQLGERDLTEAVQRLLELQNTR 713 >gi|317010401|gb|ADU84148.1| threonyl-tRNA synthetase [Helicobacter pylori SouthAfrica7] Length = 612 Score = 209 bits (532), Expect = 8e-52, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 151/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ WLP G + + ++ + G Sbjct: 207 YLFQIEEAKKRDHRKLGVELGLFS-FDDEIGAGLPLWLPKGARLRKRIEDLLSKALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + + + Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQSE--VSAILDFTHK 382 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + S M + P + + + Sbjct: 383 IMKAFDFSYEMELSTRPAKS-----------------IGDDKVWEKATNALKEALKEHHI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 NYKIDEGGGAFYGPKIDI---KITDALRRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + Sbjct: 475 EHNNAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHHG 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + +A+ P+ +++G++ V + I+ R Sbjct: 529 FALKLKEELKKCDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEMLSIRDREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 589 QTQYKMPLKEFLNMVESKMQE 609 >gi|224437778|ref|ZP_03658725.1| prolyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818] gi|313144224|ref|ZP_07806417.1| prolyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818] gi|313129255|gb|EFR46872.1| prolyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818] Length = 593 Score = 209 bits (532), Expect = 8e-52, Method: Composition-based stats. Identities = 109/228 (47%), Positives = 150/228 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F+ L+E P+DA + SH+ ++R G I Q GIY++LPLG+K LD V II+EE Sbjct: 1 MRFSQLFVNTLKEAPKDALLKSHQYLVRGGFIQQVGSGIYNFLPLGKKLLDKVRFIIKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + T A E+ + + ADLW ESGRY+ YG+E+LRL DR + + GPTHEEV+T I ++ Sbjct: 61 MDITNAQEILMGFVTPADLWRESGRYEKYGRELLRLVDRKENEFVLGPTHEEVVTFIAKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQI KFRDE+RPRFG+MR REF+MKD YSF + E ++ M + Sbjct: 121 GVKSYKQLPVHLYQIHTKFRDEVRPRFGLMRGREFIMKDGYSFHSSFEDLDREFDVMEQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFM 228 Y +I R+G+ + A+SG IGG S EF+VLA GE + K+ Sbjct: 181 YKKILERIGVDFKIVEADSGAIGGSGSKEFMVLAPCGEDTIVVCKNCE 228 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 59/185 (31%), Positives = 91/185 (49%), Gaps = 5/185 (2%) Query: 260 SDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ + D P+ + +GIEVGHIF GTKYS M+A F DGK + MG Y Sbjct: 405 ADLAQTQEGDLCPKCNGELYYTKGIEVGHIFKLGTKYSHAMNAQFLDKDGKAQDLIMGCY 464 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 G G R++ A++E D G +W V F +++I D + KIY G Sbjct: 465 GFGVSRILPAILEQKSDELGCVWGKEVKVFDLAIIISNVKDIAQSEFATKIYEECKARGI 524 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 DV DD E+ G + +LLGF +IVG K +++ ++E+ R + ++ +E N Sbjct: 525 DVLLDDRDERFGVKMKDFELLGFSFALIVG-KGLNEGRLELIKREGLKKFELQCDE--NI 581 Query: 438 ASHRF 442 + Sbjct: 582 LENLL 586 >gi|217034632|ref|ZP_03440039.1| hypothetical protein HP9810_881g25 [Helicobacter pylori 98-10] gi|216942927|gb|EEC22414.1| hypothetical protein HP9810_881g25 [Helicobacter pylori 98-10] Length = 612 Score = 209 bits (532), Expect = 8e-52, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 152/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ WLP G + + ++ + G Sbjct: 207 YLFQIEEAKKRDHRKLGVELGLFS-FDDEIGAGLPLWLPKGARLRKRIEDLLSKALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + L Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCS-----FEQIQSEVSAILDF 379 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + I + + T + + + + Sbjct: 380 --------------THKIMQAFDFSYEMELSTRPAKSIGDDKVWEKATSALKEALKEHRI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 DYKIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + Sbjct: 475 EHNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHHV 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + +A+ P+ +++G++ V + I++R Sbjct: 529 FALKLKEALKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRNREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 589 QAQYKMPLKEFLNMVESKMQE 609 >gi|254423005|ref|ZP_05036723.1| threonyl-tRNA synthetase [Synechococcus sp. PCC 7335] gi|196190494|gb|EDX85458.1| threonyl-tRNA synthetase [Synechococcus sp. PCC 7335] Length = 618 Score = 209 bits (532), Expect = 8e-52, Method: Composition-based stats. Identities = 61/443 (13%), Positives = 138/443 (31%), Gaps = 35/443 (7%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + +E R D +L L + G+ W P G + ++ EQ G Sbjct: 204 YKRRKEEAKRRDHRKLGKELGLFI-FSDEVGPGLPLWTPKGTVLRSTLEDYLKGEQVARG 262 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHIKS 124 + + P + DL+ SG + Y +++ + ++ + + I++S ++S Sbjct: 263 YLPVVTPHVGRVDLFKTSGHWQKYSEDLFPMMGESEDEGFVLKAMNCPFHVQIYKSQLRS 322 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 Y+ LP + +R E G + +D +TP + K+ Sbjct: 323 YKELPIRLAEFGTVYRYEQSGELGGLTRVRGFTQDDAHLFVTPNQLNDEFLKVVDLIQAT 382 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + + +++ S + + + + + Sbjct: 383 ------------LKVLQMDQSFRARLSFRDPKNKSKYIGSDEAWEKAQSAIRQAVETMGM 430 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y D + D+L ++ ++ + + Sbjct: 431 DHFEGIGEAAFYGPKLDFI---VRDALDREWQLGTVQVDYNLP--------ERFNLEYVA 479 Query: 305 ADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 DG M R++ +IE + + Sbjct: 480 EDGSRQRPIMIHRAPFGSLERLIGILIEQYAGDFPLWLAPEQVRLLPVA-------ESHW 532 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + E+ + K+G V D GE++G ++ P+ ++G + V+D+ + I+ R Sbjct: 533 EYAERAAIDMRKLGARVEVDKSGERLGKMIRNSEKAKIPVMSVIGDQEVTDNTLSIRTRK 592 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 G ++L EV++ Sbjct: 593 EGDLGAIALPEVLSRIKAALETR 615 >gi|119485182|ref|ZP_01619567.1| threonyl-tRNA synthetase [Lyngbya sp. PCC 8106] gi|119457410|gb|EAW38535.1| threonyl-tRNA synthetase [Lyngbya sp. PCC 8106] Length = 608 Score = 209 bits (532), Expect = 8e-52, Method: Composition-based stats. Identities = 68/441 (15%), Positives = 146/441 (33%), Gaps = 39/441 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD +L L G+ W P G + +++EQ + G + + Sbjct: 196 EEALKRDHRKLGKELGLFI-FADVVGPGLPLWTPKGTVLRSTLEDFLKKEQLKRGYLPVV 254 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKA------MIYGPTHEEVMTDIFRSHIKS 124 P + DL+ SG + Y ++M + +++A + P + I++S ++S Sbjct: 255 TPHIGRIDLFKASGHWQQYREDMFPMMAEDEEAAKLEQGFVLKPMNCPFHIQIYKSELRS 314 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR LP + +R E G + D +TPE + + + L + Sbjct: 315 YRELPIRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLESEFLNVVDLILSV 374 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F +L L + R D + S + + + + Sbjct: 375 FGKLKLSNFKARLS--------------FRDPESDKYIGSDQVWNKAESAITKAVETLEM 420 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + + A Y D D L ++ ++ + Sbjct: 421 DHFLGIGEAAFYGPKLDFI---FQDVLDREWQLGTVQVDYNLP--------ERFDLEYVA 469 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + G++ + ++ + G +W + + A Sbjct: 470 EDGTRQRPVMIHRAPFGSLERLIGILIEQYAGDFPLW------LAPIQVRLLAVSDEFLT 523 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ ++ + D E++G Q A+ P+ I+G+K V + + I+ R + Sbjct: 524 YTQEVVEKMRSLDIRAEVDRSRERLGKQIRNAEKEKIPVMAIIGAKEVEANSLSIRTRAS 583 Query: 424 GIREDMSLEEVINYASHRFSN 444 G + ++EV + +N Sbjct: 584 GELGTLPVDEVCQRIQNAIAN 604 >gi|296170866|ref|ZP_06852424.1| threonine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894491|gb|EFG74233.1| threonine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 677 Score = 209 bits (532), Expect = 8e-52, Method: Composition-based stats. Identities = 68/453 (15%), Positives = 139/453 (30%), Gaps = 50/453 (11%) Query: 8 LPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E R D +L L + + G+ + P G + R + G Sbjct: 244 LELLEEAQRRDHRKLGTELDLFS-FPDEIGSGLAVFHPKGGVVRRELEEYSRRKHIEAGY 302 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVM 114 ++ P + A L+ SG D Y + M + + P + + Sbjct: 303 EFVNTPHITKAQLFHTSGHLDWYAEGMFPPMHLDAEIGDDGTVRKPGQDYYLKPMNCPMH 362 Query: 115 TDIFRSHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHS 173 T IFRS +SYR LP ++ +R E G+ R+R F M D++ F + Sbjct: 363 TLIFRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTMDDSHIFCTREQLHGEL 422 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 + L + GL+ + + + + + + Sbjct: 423 -ASLLRFVLELLGDYGLEDFYLELST----------------KDPEKFVGTDEMWEQATN 465 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 S + A Y + + D+L + ++S ++ F F + Sbjct: 466 SLAEVAAESGLELVPDPGGAAFYGPKI---SVQARDALGRSWQMSTIQVD----FNFPER 518 Query: 294 YSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 + + DG + G++ ++ + G W V I + Sbjct: 519 F----ELEYTAPDGTRQRPVMIHRALFGSIERFFGILTEHYAGAFPAWLAPVQVVGIPVA 574 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 E + A+L G V D +++ + P ++ G + V Sbjct: 575 ------DEHVPYLESVAAQLKSHGVRVEVDASDDRMAKKIVHHTGQKVPFMLLAGDRDVQ 628 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + + + ++ ++ Sbjct: 629 AKAVSFRFGDRTQINGVPRDSAVDAIVKWIADR 661 >gi|87123890|ref|ZP_01079740.1| tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase [Synechococcus sp. RS9917] gi|86168459|gb|EAQ69716.1| tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase [Synechococcus sp. RS9917] Length = 594 Score = 209 bits (532), Expect = 8e-52, Method: Composition-based stats. Identities = 113/240 (47%), Positives = 149/240 (62%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P DAEIASH+L+LR G I + GIY++LPL + L +NAI+REE Sbjct: 1 MRVSRLMLVTLRDVPADAEIASHQLLLRGGFIRRVGSGIYAYLPLMWRVLQRINAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N GA+E +P LQ A+LW SGR+ Y M L DR + + GPTHEEV+T + Sbjct: 61 MNALGALETLLPQLQPAELWERSGRWQGYTAGEGIMFHLDDRQGRQLGLGPTHEEVITSL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP T YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + Y M Sbjct: 121 AGELLRSYRQLPVTLYQIQSKFRDEIRPRFGLMRGREFIMKDAYSFHADASDLQACYGAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y RIF R GL+++ + A+SG IGG S EF+V A+ GE + S+ + E Sbjct: 181 DGAYRRIFDRCGLQTVAVEADSGAIGGAASQEFMVTAEAGEDLILMSESGS-YAANLEKA 239 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 67/187 (35%), Positives = 100/187 (53%), Gaps = 4/187 (2%) Query: 260 SDVHNEKLFDSL---PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 D+ N + D PE ++ RGIEVGHIF G KYS M A+F ADG + MG Sbjct: 407 VDLRNAQAGDRCQSDPEQTLMARRGIEVGHIFQLGRKYSQAMDASFTNADGGQEALWMGC 466 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R+ A +E HD GI WP ++APF++ ++ + R E +YARL G Sbjct: 467 YGIGVSRLAQAAVEQHHDDAGICWPLAIAPFQVIVVVANLQEATQRSLGEDLYARLMAQG 526 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D DD E+ G +F ADL+G P +++VG + +D +VE+ R T + ++++ + Sbjct: 527 VDALLDDRQERAGVKFKDADLIGIPWRIVVG-RAAADGQVELVERATRQADVLTVDAALE 585 Query: 437 YASHRFS 443 + Sbjct: 586 RVLAAVA 592 >gi|332220153|ref|XP_003259222.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 1 [Nomascus leucogenys] Length = 718 Score = 209 bits (531), Expect = 8e-52, Method: Composition-based stats. Identities = 83/456 (18%), Positives = 138/456 (30%), Gaps = 55/456 (12%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + RD + L H+ S G +LP G + + + A IR E R G E+ Sbjct: 294 REEAELRDHRRIGKEQELF--FFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEV 351 Query: 70 SVPTLQSADLWVESGRYDSYGKEML----------------RLADRNDKAMIYGPTHEEV 113 PTL S LW +SG ++ Y ++M + P + Sbjct: 352 KTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPA 411 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 +F +S+R LP R E G+ R R F DA+ F T + Sbjct: 412 HCLMFAHRPRSWRELPLRLADFGALHRAEASGSLRGLTRLRCFQQDDAHIFCTTDQLEAE 471 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 ++ LG + P G D Sbjct: 472 -IQSCLDFLRSVYAVLGFSFRLA-LSTRPSGF-----------------LGDPCLWDQAE 512 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y DVH L D+L + ++ F Sbjct: 513 QVLKQALKEFGEPWDLNSGDGAFYGPKIDVH---LHDALGRPHQCGTIQLD----FQLPL 565 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 ++ +KG G + + ++ + G WP ++PF++ +I Sbjct: 566 RFD----LQYKGQAGALERPVLIHRAVLGSMER--LLGVLAESCGGKWPLWLSPFQVVVI 619 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + + + + L G D D G + + A L + Q +VG K Sbjct: 620 PVGTEQE---EYAREAQQSLQAAGLVSDLDADSGLTLSRRIRQAQLAHYNFQFVVGQKEQ 676 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 S V I+ R + L E + + P Sbjct: 677 SKRTVNIRTRDNRRLGEWDLPEAVQRLVELQNTRVP 712 >gi|296194829|ref|XP_002745122.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic [Callithrix jacchus] Length = 723 Score = 209 bits (531), Expect = 8e-52, Method: Composition-based stats. Identities = 72/447 (16%), Positives = 149/447 (33%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 306 KMLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNALIDFIRSE 363 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M ++ P + +F Sbjct: 364 YRKRGFQEVVTPNIYNSRLWMTSGHWQHYSENMFSFEVEKEQ-FALKPMNCPGHCLMFDH 422 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 423 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 481 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E A+ Sbjct: 482 FLRMVYSVFGFSFKLN-LSTRPEKFLGDIEVWNQAEK-----------------QLENSL 523 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F +++L Sbjct: 524 NEFGEKWELNSGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRFNLTFV 576 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 577 SH--DGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGPS-- 629 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C + +K+ + D D G + + A L + ++VG K V I Sbjct: 630 -CDEYAQKVRQQFHAAKFMADVDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNI 688 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R + + ++ E + + Sbjct: 689 RTRDNKVHGERTVSETVERLQQLKESR 715 >gi|149195433|ref|ZP_01872516.1| threonyl-tRNA synthetase [Caminibacter mediatlanticus TB-2] gi|149134438|gb|EDM22931.1| threonyl-tRNA synthetase [Caminibacter mediatlanticus TB-2] Length = 613 Score = 209 bits (531), Expect = 9e-52, Method: Composition-based stats. Identities = 72/444 (16%), Positives = 137/444 (30%), Gaps = 46/444 (10%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E RD +L L + + G+ WLP G N+ ++ + Sbjct: 202 YLKRLEEALKRDHRKLGKELELWL-FDEEVAPGMPIWLPRGAMLRANLEKLLFSAHIQRE 260 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK------AMIYGPTHEEVMTDIFR 119 + P + +++W SG Y +Y + M +D P + IF Sbjct: 261 YEPVRGPEILRSEMWKISGHYYNYKENMYFTEIAHDDNQKQAEEYGIKPMNCLSHVKIFG 320 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 ++SY+ LP F++ R E G++R REF DA+ F + + + Sbjct: 321 HKVRSYKELPLRFFEFGTVHRHEKSGVLHGLLRVREFTQDDAHIFCRPEQIEEEVIK-VL 379 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 I R G K + P S E + + Sbjct: 380 DFVDSIMQRFGFKYEM-EISTRPEKSIGSDE-----------------IWEKATEALKNA 421 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + + I E A Y D+ K+ D++ + ++ F ++ Sbjct: 422 LNKLNREYGIDEGGGAFYGPKIDI---KITDAIGRKWQCGTIQVD----FNLPERFD--- 471 Query: 299 SATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 ++ + + + IG+ A++ + Sbjct: 472 -ISYIDENNERKRPVMIHRAIIGSFERFIAILTEH------YAGEFPTFIAPIKAIFVPI 524 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + D ++I L K + + + A+ VI+G + V D V Sbjct: 525 SENHIDYAKEIQKELLKDDLKTEIYASNDSLNKRIRNAEKQKVAYVVIIGDEEVKDGTVA 584 Query: 418 IKHRLTGIREDMSLEEVINYASHR 441 I+ R + M E + Sbjct: 585 IRDRRKRTQYKMKKGEFVEMIKKL 608 >gi|206889362|ref|YP_002248875.1| prolyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] gi|226701352|sp|B5YKW0|SYP_THEYD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|206741300|gb|ACI20357.1| prolyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 571 Score = 209 bits (531), Expect = 9e-52, Method: Composition-based stats. Identities = 109/256 (42%), Positives = 153/256 (59%), Gaps = 1/256 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK F+P ++E P SH LML+ G + Q + G++ +LPLG + L+ +N I++EE Sbjct: 1 MRYSKLFIPTMREIPSGINAISHILMLKAGYVRQLAAGLFIFLPLGWRVLNKINMILKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA E+S+P L A++W E+GR+ + +EM RL DR + M G THEE+MT I Sbjct: 61 MERIGAQEISMPILHPAEIWQETGRWYTIKEEMFRLKDRTGRDMCLGMTHEEIMTWIASK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSYR LP +YQIQ K RDE RPR GV+R+REF+MKD+YSFD+ EG SYN + Sbjct: 121 EIKSYRQLPQIWYQIQTKLRDEARPRGGVLRTREFIMKDSYSFDIDWEGLDKSYNLHAEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPSENTDF 239 Y RIF + GLK + ++ G +G SHEF+ GE ++ C I ++ Sbjct: 181 YHRIFTKCGLKYYQVESDPGIMGDMESHEFMAPTPAGEDEIVLCDSCGYSANIEVAKSEL 240 Query: 240 DDIISLNSIVEQWTAP 255 + SLN ++ P Sbjct: 241 PTLPSLNFEYKEIYTP 256 Score = 142 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 77/228 (33%), Positives = 116/228 (50%), Gaps = 12/228 (5%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQWT---APYAATSDVHNEKLFDSLPENK--RVSA 279 K DF I E + N ++ A +D+ K D P+ Sbjct: 338 KKIADFSIQKEISYISGANKKNYHLQGIIPGIHFDAQWADIRRVKEEDRCPKCGNSLKIE 397 Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 + IEVG+IF GTKY+ P+ A F DGK+ + MGSYGIG RV AA IE +HD GII Sbjct: 398 KAIEVGNIFKLGTKYTEPLHAYFLDKDGKEKPIIMGSYGIGPARVAAAAIEQNHDSDGII 457 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYAR-------LSKVGCDVFWDDMGEQIGSQF 392 WP S++PF I +I + D+ E++Y + + +V DD E+ G +F Sbjct: 458 WPKSISPFDIEIIPLNMDDEKTVSIAEELYEKVTEIYNSFADRHMEVLIDDRDERPGVKF 517 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 ADL+G P+Q+++G K + ++KVEIK R T + +S+ + + + Sbjct: 518 KDADLIGIPIQIVIGKKGLKENKVEIKKRRTKETKKVSVNKAVVEIVN 565 >gi|145230123|ref|XP_001389370.1| threonyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS 513.88] gi|134055485|emb|CAK44000.1| unnamed protein product [Aspergillus niger] Length = 718 Score = 209 bits (531), Expect = 9e-52, Method: Composition-based stats. Identities = 76/464 (16%), Positives = 144/464 (31%), Gaps = 51/464 (10%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ + L L+E R+ + L + S G LP G K + + +++R E Sbjct: 282 KQMQEHLKFLEEAEKRNHVKLGKEQELF--FFDEVSPGCPFLLPNGTKIFNALQSLLRSE 339 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + +W SG + Y +M +L D + P + +F Sbjct: 340 YRKRGYQEVQTPNMYDVGIWKTSGHWAHYKDDMFKL-DVEKREWALKPMNCPGHFVLFGH 398 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SYR LP + R+E G+ R R+F D + F + + +F Sbjct: 399 RERSYRELPLRIADFGVLHRNEASGALSGLTRVRKFQQDDTHIFCTQDQITSE-IEGLFD 457 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 I+ G ++ + P + + ++ Sbjct: 458 FLQAIYGLFGFTF-KLKLSTRP-----------------EKYLGELETWNYAEEQLKAAM 499 Query: 240 DDIISLNSIV-EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTKYSL 296 + + E A Y D+ + D+L + + ++ F + Sbjct: 500 TKFKGNDWTIDEGDGAFYGPKIDI---TIADALKREFQCATIQLDYQAPINFKLEYMSNE 556 Query: 297 PMSATFKGA---------DGKDHYVQMGSYGIGAM-RVVAAVIESSHDGKGIIWPDSVAP 346 SA G+ V + IG+ R + +IE Sbjct: 557 KASADAAKEGEAKPNEPGPGRARPVVIHRAIIGSFERFLGILIEHFGGKWPFWISPRQIL 616 Query: 347 FKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIV 406 + + D E++ L +V D G + + L + +V Sbjct: 617 IVPVMPAVN-------DYVEELQTILRGDKLNVDIDLSGNTMQKKIRTGQLQQYNFIFVV 669 Query: 407 GSKFVSDSKVEIKHRL---TGIREDM-SLEEVINYASHRFSNNR 446 G+ V I++R T + M L+EV R Sbjct: 670 GASEKESRTVNIRNRDDPATQKQGVMIPLDEVREKLRSLRKERR 713 >gi|330932301|ref|XP_003303723.1| hypothetical protein PTT_16056 [Pyrenophora teres f. teres 0-1] gi|311320083|gb|EFQ88182.1| hypothetical protein PTT_16056 [Pyrenophora teres f. teres 0-1] Length = 776 Score = 209 bits (531), Expect = 9e-52, Method: Composition-based stats. Identities = 82/479 (17%), Positives = 149/479 (31%), Gaps = 64/479 (13%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + L L+E RD + L H+ S G +LP GQ + + A +REE Sbjct: 320 QAHLKFLEEAAKRDHRKIGKEQELF--FFHEFSPGSCFFLPHGQIIYNTLQAFLREEYWN 377 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + ++ LW SG + Y +M D + P + IF+ + Sbjct: 378 RGYQEVGSPNMYNSALWKISGHWQHYADDMFTF-DVEKEKWALKPMNCPGHCLIFKHRER 436 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP + R+E G+ R R F D + F + ++ + +F Sbjct: 437 SYRELPIRMADFGILHRNEASGALTGLTRVRRFQQDDTHVFCTQDQITEE-ISALFDFLR 495 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ + G + + P G E D E ++ + N Sbjct: 496 AVYGKFGFTFKM-KLSTRPEGFLGDIE---TWDKAEGKL----------TEALNQFTAAG 541 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTKYSLPMSA 300 S + A Y D+ + D+L + + ++ F S + Sbjct: 542 GSAWELNPGDGAFYGPKIDI---TISDALKREFQCATIQLDFQLPNQFELEYMTSEVIPV 598 Query: 301 TFKG-----------------------------ADGKDHYVQMGSYGIGAMRVVAAVIES 331 K G V + G+ A++ Sbjct: 599 KNKDQLQEGGHIEQKKEKLEGADVTIPKKIKEPQPGYARPVMIHRAIYGSFERFIAILTE 658 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 G+ W I ++ D +++ A L K D G + + Sbjct: 659 HFAGRWPFWLSPRQVMIIPVMP------GANDYVKEVQAELRKHRLHADIDISGNTMQKK 712 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED----MSLEEVINYASHRFSNNR 446 A L + ++VG++ V ++R + + L+E + R Sbjct: 713 IRTAQLALYNFIMVVGAEEQQARAVNWRNRDDQETQQRGVIVPLDEAVKKLVELRDERR 771 >gi|332251674|ref|XP_003274971.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic isoform 1 [Nomascus leucogenys] Length = 723 Score = 209 bits (531), Expect = 1e-51, Method: Composition-based stats. Identities = 74/449 (16%), Positives = 148/449 (32%), Gaps = 44/449 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + + +E RD L H+ S G +LP G + + IR E Sbjct: 306 KMLKEWEKLQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNALIEFIRSE 363 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y M + P + +F Sbjct: 364 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSDNMFSFEVEKEL-FALKPMNCPGHCLMFDH 422 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 423 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 481 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E D Sbjct: 482 FLRTVYSIFGFSFKLN-LSTRPEKFLGDIE-----------------VWDQAEKQLENSL 523 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 524 NEFGEKWELNSGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 572 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 573 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 628 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ + D D G + + A L + ++VG K V Sbjct: 629 --TCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTV 686 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 I+ R + + ++ E I + Sbjct: 687 NIRTRDNKVHGERTISETIERLQQLKQSR 715 >gi|116072890|ref|ZP_01470155.1| prolyl-tRNA synthetase [Synechococcus sp. BL107] gi|116064416|gb|EAU70177.1| prolyl-tRNA synthetase [Synechococcus sp. BL107] Length = 593 Score = 209 bits (531), Expect = 1e-51, Method: Composition-based stats. Identities = 109/240 (45%), Positives = 148/240 (61%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P +AEIASH+L+LR G I + GIY +LPL K + + AI+R+E Sbjct: 1 MRVSRLLLVTLRDVPAEAEIASHQLLLRGGYIRRVGSGIYGYLPLMWKVIQRITAIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N+ GA E +P L A+LW SGR+ Y M L DR + + GPTHEEV+T + Sbjct: 61 LNKAGAQETLLPQLHPAELWQRSGRWQGYTAGEGIMFHLEDRQGRELGLGPTHEEVVTSL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SY+ LP YQ+Q KFRDE+RPRFG+MR REF+MKDAYSF + +++Y M Sbjct: 121 AGDLLQSYKQLPVNLYQVQTKFRDEIRPRFGLMRGREFIMKDAYSFHASEADLRNTYLDM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y RIF R GL ++P+ A+SG IGG S EF+V AD GE + S D + E Sbjct: 181 DQAYRRIFERCGLAAVPVDADSGAIGGAASQEFMVTADAGEDLILLSDDGT-YAANQEKA 239 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 61/172 (35%), Positives = 87/172 (50%), Gaps = 1/172 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 PE + RGIEVGHIF G KYS M + F GK + MG YGIG R+ A +E Sbjct: 422 PEAHLIEKRGIEVGHIFQLGRKYSEAMDSRFTNEAGKTEHFWMGCYGIGISRLAQAAVEQ 481 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 HD GI WP ++AP++ ++ DQ + E +Y +L G D +DD E+ G + Sbjct: 482 HHDDAGICWPPAIAPYEAIVVVANMQDQTQAELGESLYEQLLAAGVDALFDDRKERAGVK 541 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 F ADL+G P +V+VG + D VE+ R + + + +N Sbjct: 542 FKDADLIGIPWRVVVG-RDAGDGVVELVERANRGVQKLPHADALNELLSTLR 592 >gi|81428868|ref|YP_395868.1| prolyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K] gi|114152205|sp|Q38W72|SYP_LACSS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|78610510|emb|CAI55561.1| Prolyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K] Length = 569 Score = 209 bits (531), Expect = 1e-51, Method: Composition-based stats. Identities = 104/235 (44%), Positives = 151/235 (64%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L+E P AE SH++MLR G IHQ S G+YS+LPL + L+N+ AII++E Sbjct: 1 MKQSKLFIPTLKEVPNSAEAKSHRMMLRAGYIHQVSAGVYSYLPLAYRVLENIQAIIKDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ A++M +P + A+LW ESGRY +YG + + DR+ + I GPTHEE D+ R+ Sbjct: 61 MSKIDAVQMQMPGILPAELWEESGRYATYGPNLFKFKDRHSRDFILGPTHEETFADLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ LP T YQIQ K+RDE RPR+G++R REF+M+DAYSF ++ +M + Sbjct: 121 NIKSYKKLPLTLYQIQTKYRDEDRPRYGLLRGREFIMQDAYSFSANEADLDTTFQQMRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL + ++G +GG S EF +A+ GE + S D+ E Sbjct: 181 YTNIFERCGLDFRAIVGDAGAMGGKDSMEFSAIAEIGEDTIVYSDQ-SDYAANLE 234 Score = 167 bits (424), Expect = 3e-39, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 1/196 (0%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A E E K +GIE+GHIF GT+Y+ ATF +G+ Sbjct: 375 DFNVADYADLRFVQEGETAPDGEGKLQFTKGIEIGHIFKLGTRYTEQFGATFLDENGRAK 434 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + MGSYGIG R+++A+ E D G++WP ++AP+ + ++ + D + E+I Sbjct: 435 PIIMGSYGIGVSRLLSAITEQQADENGLVWPSAIAPYDLHVVPVNVKDDAQVELAEQIEG 494 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L + G V DD E+ G +FA +DL+G P+++ VG K + VE+K R TG ++ Sbjct: 495 LLEEAGYSVLVDDRKERAGVKFADSDLIGLPIRITVGKKAAEE-IVEVKLRKTGETLEVK 553 Query: 431 LEEVINYASHRFSNNR 446 +E+IN S ++ + Sbjct: 554 KDELINSLSILLASEK 569 >gi|115524346|ref|YP_781257.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris BisA53] gi|115518293|gb|ABJ06277.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodopseudomonas palustris BisA53] Length = 679 Score = 209 bits (531), Expect = 1e-51, Method: Composition-based stats. Identities = 80/429 (18%), Positives = 141/429 (32%), Gaps = 39/429 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + G+ W G + A +R Sbjct: 257 YLKQIEEAEKRDHRKLGRELDLF--HFQEEGPGVVFWHAKGWTIFQALIAYMRRRL-AGD 313 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-----KAMIYGPTHEEVMTDIFRS 120 E++ P + LW SG +D Y + M D + P + I++ Sbjct: 314 YDEVNAPQILDKVLWETSGHWDWYRENMFAAQSAGDEAEDKRWFALKPMNCPGHIQIYKH 373 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + + R E G+MR R F DA+ F T K+ Sbjct: 374 GLKSYRDLPLRMAEFGIVHRYEPSGAMHGLMRVRGFTQDDAHVFC-TELQLAEECLKINE 432 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L + G I ++ + P + E A+ V +E Sbjct: 433 LILSTYSDFGFGDIVVKLSTRPDKRVGTDESWDHAERVMATVL-----------AEIEAA 481 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 +I A Y + L D++ + + ++ FG Sbjct: 482 SGGRIKTAINPGEGAFYGPKFEY---VLRDAIGRDWQCGTTQVDFNLPERFG-------- 530 Query: 300 ATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + ADG K + + G+M ++ + +P ++P ++ + I + Sbjct: 531 AFYIDADGAKKTPIMVHRAICGSMERFTGILI---EHFAGHFPLWLSPVQVMVTTITSEG 587 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D + + A K G V D E+I + L P ++VG K V + Sbjct: 588 D---DYAKVVAAAARKAGLRVEIDLRNEKINYKVREHSLAKIPAMLVVGKKEAETHSVSV 644 Query: 419 KHRLTGIRE 427 + + + Sbjct: 645 RRLGSDGQT 653 >gi|171910788|ref|ZP_02926258.1| threonyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136] Length = 652 Score = 209 bits (531), Expect = 1e-51, Method: Composition-based stats. Identities = 71/497 (14%), Positives = 136/497 (27%), Gaps = 86/497 (17%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +K+ + + RD +L L + + +G+ WLP G + I EE Sbjct: 188 LAKHLEQLEEAKKRDHRKLGRELQLFA-IDEKVGQGLILWLPKGAVIRQELQNFIGEELR 246 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL-------------------------- 96 + G ++ P + +L+ SG + Y + Sbjct: 247 KQGYQQVFTPHIGKLELYKTSGHFPYYKESQFSPVVENDELAKAADCGCSCAEVMARLEG 306 Query: 97 -------------------ADRNDKA------MIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 ADR + P + I+ KSYR+LP Sbjct: 307 VSKKLREEINSRTGQDTITADRVMPEEDLMDGFLLKPMNCPHHIRIYAQSPKSYRDLPVR 366 Query: 132 FYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 + +R E G + +D T + + + LG+ Sbjct: 367 LAEFGTVYRWEQSGELGGLTRVRGFTQDDAHLFCTEDQVEQEIMGCLSLVKTVLTTLGMS 426 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ 251 +R + L D + + + D S + + Sbjct: 427 DYRVR--------------VGLRDPDSNKYTGTAESWDKAEASCRKAASTLGVPFTEEPG 472 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A Y D + D + ++ ++ + F T+ GAD H Sbjct: 473 EAAFYGPKIDF---VVKDVIGREWQLGTVQVDYNNPVRFD--------LTYIGADNAAHR 521 Query: 312 VQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 M R +IE + + ++ Sbjct: 522 PVMIHRAPFGSMERFTGVLIEHFAGHFPVWLAPEQVRVLTV-------SEKSDAFANEVL 574 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 L G V D ++IG++ A + P +++G K + V ++H G Sbjct: 575 NELKAKGVRVVLDQSSDKIGAKIRNAQIDKIPYMLVIGEKEANSGAVAVRHSKKGDLGVK 634 Query: 430 SLEEVINYASHRFSNNR 446 +L E + + + Sbjct: 635 ALGEFVTGLQEEIAERK 651 >gi|116075299|ref|ZP_01472559.1| prolyl-tRNA synthetase [Synechococcus sp. RS9916] gi|116067496|gb|EAU73250.1| prolyl-tRNA synthetase [Synechococcus sp. RS9916] Length = 600 Score = 209 bits (531), Expect = 1e-51, Method: Composition-based stats. Identities = 111/240 (46%), Positives = 153/240 (63%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P DAEIASH+L+LR G I + GIY++LPL + L ++AI+++E Sbjct: 1 MRVSRLMLVTLRDVPADAEIASHQLLLRGGYIRRVGSGIYAYLPLMWRVLRKISAIVQQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + TGA+E +P LQ A+LW SGR+ Y M L DR + + GPTHEEV+T + Sbjct: 61 MDATGALETLLPQLQPAELWERSGRWQGYTAGEGIMFHLEDRQGRQVGLGPTHEEVVTSL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP T YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + Y +M Sbjct: 121 AGELLRSYRQLPVTVYQIQNKFRDEIRPRFGLMRGREFIMKDAYSFHADEQDLGRCYGEM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 ++Y RIF R GL+++ + A+SG IGG S EF+V A+ GE + S+D + E Sbjct: 181 DLAYRRIFERCGLQAVAVEADSGAIGGAASQEFMVTAEAGEDLILTSEDGS-YAANLEKA 239 Score = 166 bits (419), Expect = 1e-38, Method: Composition-based stats. Identities = 67/184 (36%), Positives = 96/184 (52%), Gaps = 4/184 (2%) Query: 260 SDVHNEKLFDSL---PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 D+ N + D P+ V+ RGIEVGHIF G KYS M ATF A+G MG Sbjct: 407 IDLRNAQAGDRCLQSPDQTLVARRGIEVGHIFQLGRKYSQAMDATFTTAEGGQDAFWMGC 466 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R+ A +E HD GI WP ++APF++ ++ D E++Y+ L G Sbjct: 467 YGIGVSRLAQAAVEQHHDKAGICWPLAIAPFQVVIVVANMQDDTQLQLGEQLYSTLQASG 526 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD E+ G +F ADL+G P +++VG + ++ +VE+ R T + + E I Sbjct: 527 IDVLLDDRSERAGVKFKDADLIGIPWRLVVG-RDAANGQVELVERATRDTQVLPHAEAIT 585 Query: 437 YASH 440 Sbjct: 586 ALRQ 589 >gi|38570111|ref|NP_689547.2| probable threonyl-tRNA synthetase 2, cytoplasmic [Homo sapiens] gi|189083596|sp|A2RTX5|SYTC2_HUMAN RecName: Full=Probable threonyl-tRNA synthetase 2, cytoplasmic; AltName: Full=Threonine--tRNA ligase; Short=ThrRS; AltName: Full=Threonyl-tRNA synthetase-like protein 2 gi|119622721|gb|EAX02316.1| threonyl-tRNA synthetase-like 2 [Homo sapiens] gi|124376838|gb|AAI32672.1| Threonyl-tRNA synthetase-like 2 [Homo sapiens] gi|187953219|gb|AAI36316.1| Threonyl-tRNA synthetase-like 2 [Homo sapiens] Length = 802 Score = 209 bits (531), Expect = 1e-51, Method: Composition-based stats. Identities = 74/447 (16%), Positives = 150/447 (33%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + + + +E RD + L H S G +LP G + + IREE Sbjct: 385 KMMRDWEKFQEEAKNRDHRKIGKEQELF--FFHDLSPGSCFFLPRGAFIYNTLTDFIREE 442 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ E+ P + ++ LW SG + Y + M D P + +F Sbjct: 443 YHKRDFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIEKDT-FALKPMNCPGHCLMFAH 501 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R +P F + R+EL G+ R R F DA+ F + + Sbjct: 502 RPRSWREMPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQ-IEEEIKGCLQ 560 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G F + T + + Sbjct: 561 FLQSVYSTFGFS------------------FQLNLSTRPENFLGEIEMWNEAEKQLQNSL 602 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D + A Y D+ K+ D++ + + ++ F +++L Sbjct: 603 MDFGEPWKMNPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRFNLTYV 655 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K V + +G++ + A++ + G WP ++P ++ +I + Sbjct: 656 SK--DGDDKKRPVIIHRAILGSVERMIAILS---ENYGGKWPFWLSPRQVMVIPVGP--- 707 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C ++ + + G D D + + A L + ++VG K D+ V + Sbjct: 708 TCEKYALQVSSEFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNV 767 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R I ++ + I+ + Sbjct: 768 RTRDNKIHGEILVTSAIDKLKNLRKTR 794 >gi|270284377|ref|ZP_05966008.2| proline--tRNA ligase [Bifidobacterium gallicum DSM 20093] gi|270276752|gb|EFA22606.1| proline--tRNA ligase [Bifidobacterium gallicum DSM 20093] Length = 602 Score = 209 bits (531), Expect = 1e-51, Method: Composition-based stats. Identities = 101/242 (41%), Positives = 144/242 (59%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DA++ S KL+ R G + + + GI++WLPLG L+ + AIIREE Sbjct: 6 RMSSLFLRTLREDPADADVDSDKLLQRAGYLRKAAPGIWTWLPLGLSVLNKIEAIIREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N GA E+ P L + + R++ YG+ + RL DR++ + PTHEE+ T + + Sbjct: 66 NGIGAQEVHFPALLPRAPYEATHRWEEYGENLFRLKDRHEADYLLAPTHEEMFTLLVKDM 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF L EG K Y + +Y Sbjct: 126 YSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTLDEEGMKRCYMEERAAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF RL L+ +P+ A SGP+GG S EF+ GE + + + + T + Sbjct: 186 ERIFQRLDLQYVPVFAMSGPMGGSASEEFLAPLAIGEDTFALAPSGKAWNVEALKTPEVE 245 Query: 242 II 243 I Sbjct: 246 EI 247 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 58/190 (30%), Positives = 95/190 (50%), Gaps = 4/190 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ RG+E+G +F G KYS + +GK V MG Sbjct: 413 GTVEAVVVRDGDMSPDGSGPLSFERGVEIGQVFQLGLKYSEALGLNVLNQNGKSVPVWMG 472 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG RV+A + ES HD +G+ WP ++AP ++ ++ D+ +A EK+ A L Sbjct: 473 CYGIGVSRVLACIAESHHDERGLAWPANIAPAQVHVVATG-KDEAAFEAAEKLVAELEAR 531 Query: 376 GCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD + G +F A+L+G PL + G V+D +E++ R ++ + E Sbjct: 532 GVEVIFDDRKKVSPGVKFKDAELIGVPLIAVAGRDTVNDGTIEVRLRDGSDKQAVPAETA 591 Query: 435 INYASHRFSN 444 + R +N Sbjct: 592 AQVIADRVAN 601 >gi|309800860|ref|ZP_07694992.1| threonine--tRNA ligase [Bifidobacterium dentium JCVIHMP022] gi|308222396|gb|EFO78676.1| threonine--tRNA ligase [Bifidobacterium dentium JCVIHMP022] Length = 677 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 65/459 (14%), Positives = 135/459 (29%), Gaps = 50/459 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L+E RD ++ L + + G+ + P G ++ + RE + Sbjct: 242 KAYQTRLEEAAKRDHRKLGAEMDLFS-FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRK 300 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHE 111 + P + L+ SG Y M + P + Sbjct: 301 HHYSFVQTPHITKGGLYETSGHLHWYKDGMYPAMRLDEEKDENGNIIKQGFDYYLKPMNC 360 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 361 PMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMK 420 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L + GL + + + S + + Sbjct: 421 DEL-KNLLTFVLGLLKDFGLDDFYLELST----------------KDPHKYVGSDEIWEE 463 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + A Y + + D++ +VS ++ F Sbjct: 464 ATNTLAEVAKESGLELVDDPCGAAFYGPKI---SVQARDAIGRTWQVSTIQLD----FNL 516 Query: 291 GTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 ++ + ADG + G++ AV+ + G W V + Sbjct: 517 PERF----KLEYIAADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGV 572 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 + ++ A L + D ++ G + A P +IVG + Sbjct: 573 PVA------DEFAPHLQRFIASLEEETVRCEIDMSDDRFGKKIRNASKSKVPFILIVGEE 626 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 ++++ V + R + ++E N V Sbjct: 627 DMNNNAVSFRFRDGSQLNGVPVDEAKNQIMTVLRKRVQV 665 >gi|208434081|ref|YP_002265747.1| threonyl-tRNA synthetase [Helicobacter pylori G27] gi|238065115|sp|B5Z9Q1|SYT_HELPG RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|208432010|gb|ACI26881.1| threonyl-tRNA synthetase [Helicobacter pylori G27] Length = 612 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 77/441 (17%), Positives = 151/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ WLP G + + ++ + G Sbjct: 207 YLFQIEEAKKRDHRKLGVELGLFS-FDDEIGAGLPLWLPKGARLRKRIEDLLSKALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + L Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCS-----FEQIQSEVSAILDF 379 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + I + + T + + + + Sbjct: 380 --------------THKIMQAFDFSYEMELSTRPAKSIGDDKVWEKATSALKEALKEHRI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 DYKIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + Sbjct: 475 ERNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHHV 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + +A+ P+ +++G++ V + I+ R Sbjct: 529 FALKLKEALKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E ++ + Sbjct: 589 QAQYKMPLKEFLSMVESKMQE 609 >gi|260905197|ref|ZP_05913519.1| prolyl-tRNA synthetase [Brevibacterium linens BL2] Length = 615 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 107/279 (38%), Positives = 156/279 (55%), Gaps = 2/279 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S F+ +E+P AE+ASHKL+ R G I + + GIY+WLPLG + L + AI+REE Sbjct: 4 RMSSLFVRTQKEDPVGAEVASHKLLHRAGYIRRSAPGIYTWLPLGLQVLGKIEAIVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 R G+ E+ P L AD + +SGR++++G ++ L DR D I PTHEEV T + + Sbjct: 64 ARAGSQEVHFPGLLPADPYRKSGRWEAFGPDLFHLKDRKDNDYILAPTHEEVFTLLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP + YQ+Q K+RDE RPR G++R REF+MKDAYSFD+ G SY M V+Y Sbjct: 124 YSSYKDLPLSIYQVQTKYRDEARPRAGLLRGREFIMKDAYSFDIDDAGLDASYEAMRVAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 LR F RLG+ +P++A G +GG + EFI ++ GE S + + + + Sbjct: 184 LRAFARLGVPCLPVKATPGAMGGSGTEEFIYPSEVGEDTFVRSPGGYAANVEAVTSIVPE 243 Query: 242 IISLNSIVEQ--WTAPYAATSDVHNEKLFDSLPENKRVS 278 I + P T + + + P R Sbjct: 244 TIPFENSPAAHVEDTPDTPTIETLVDAANANHPREDRAW 282 Score = 142 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 59/182 (32%), Positives = 94/182 (51%), Gaps = 5/182 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + L D P+ ARG+E+G IF G KY+ + +GK V MG Sbjct: 409 GTIEAAEVVLGDPAPDGSGPLELARGVEIGQIFKLGRKYAEALDLKVLDQNGKATTVTMG 468 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G RV+A + E H G++WP +AP + +I + +A EK+ A L Sbjct: 469 SYGLGVTRVMACIAEEYHSEGGLLWPQHLAPADVHIIAAGKG-EEIAEAAEKLTAELESE 527 Query: 376 GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G V DD G +FA A+L+G P ++VG + ++D VE+++RL ++++ + EV Sbjct: 528 GVSVLLDDRLKVSPGFKFADAELIGIPTVIVVG-RGLADGVVEVRNRLADEKQEVPVAEV 586 Query: 435 IN 436 + Sbjct: 587 VA 588 >gi|55741823|ref|NP_001006977.1| threonyl-tRNA synthetase, cytoplasmic [Rattus norvegicus] gi|59896667|sp|Q5XHY5|SYTC_RAT RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|53734298|gb|AAH83914.1| Threonyl-tRNA synthetase [Rattus norvegicus] Length = 695 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 150/445 (33%), Gaps = 44/445 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 278 KLLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNTLMEFIRSE 335 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + + P + +F Sbjct: 336 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSF-EVEKEQFALKPMNCPGHCLMFDH 394 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 395 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 453 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E A+ Sbjct: 454 FLRTVYSVFGFSFKLN-LSTRPEKFLGDIEIWNQAEK-----------------QLENSL 495 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 496 NEFGEKWELNPGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 544 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 545 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 600 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ V D D G + + A L + ++VG K + V Sbjct: 601 --TCDEYAQKVRQEFHDAKFMVDIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTV 658 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 I+ R + + ++ E + Sbjct: 659 NIRTRDNKVHGERTVGETVERLQQL 683 >gi|116617800|ref|YP_818171.1| prolyl-tRNA synthetase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122271999|sp|Q03YC4|SYP_LEUMM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116096647|gb|ABJ61798.1| Prolyl-tRNA synthetase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 572 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L++ P +AE+ SH+L+L+ G I + G++S+LPL ++ L+ + IIREE Sbjct: 1 MKQSKLLMPTLRDIPAEAEVKSHQLLLKAGYIRPIAAGMFSYLPLAKRVLNKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ A EM VP + A+LW SGRY++YG + + +R D+ I GPTHEE T + Sbjct: 61 MDKIDANEMLVPEVLPAELWQRSGRYETYGPALYKFKNRQDRDFILGPTHEETFTQLIAD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R+REF+MKDAYSF EG +++ M + Sbjct: 121 EIKSYKKLPLTVYQIQAKFRDENRPRFGLLRTREFIMKDAYSFSADQEGLDEAFHNMEEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF RLGL+ + ++G +GG S EF A GE + S D+ E Sbjct: 181 YTNIFDRLGLEYRAIVGDAGAMGGSDSKEFSAPAAAGEDTIAYSD-ATDYAANLE 234 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 60/158 (37%), Positives = 88/158 (55%), Gaps = 1/158 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 + K GIE+GHIF GT+YS + A +G+ V MGSYGIG R+++A+ E Sbjct: 398 GKGKLQFTSGIEIGHIFKLGTRYSKTLGAQVLDNNGRQTDVIMGSYGIGVSRLLSAIAEQ 457 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 D G++WP SVAPF I ++ I D+ E++ L G +V DD E+ G + Sbjct: 458 KADEDGLVWPASVAPFDIHIVPINMKDEDQARVAEQLETLLVAQGMEVLVDDRKERAGVK 517 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 FA ADL+G P+++ VG K + VE+K R + +M Sbjct: 518 FADADLIGLPIRITVGKK-ADEDVVEVKVRASNTNIEM 554 >gi|126321714|ref|XP_001373481.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 723 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 73/449 (16%), Positives = 152/449 (33%), Gaps = 44/449 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G ++P G + + IR E Sbjct: 306 KMLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFMPKGAYIYNTLVEFIRNE 363 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + P + +F Sbjct: 364 YRKRGFQEVVTPNIYNSKLWLTSGHWQHYSENMFSFEVEKEI-FALKPMNCPGHCLMFDH 422 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + + Sbjct: 423 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTMEQ-IEEEIKNCLD 481 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 +++ G + P E A+ + Sbjct: 482 FLRTVYNVFGFSFKLN-LSTRPEKFLGDVEIWNQAEK-----------------QLESSL 523 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 524 NEFGEKWELNPGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 572 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 573 LTYVSHDGDDKKRPVIIHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 628 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ + D D G + + A L + ++VG K + V Sbjct: 629 --TCDEYAQKVQQQFHNANLMTDSDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKTSGTV 686 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 I+ R + + ++ E I Sbjct: 687 NIRTRDNKVHGERTVSETIERLQQLKQTR 715 >gi|254421628|ref|ZP_05035346.1| prolyl-tRNA synthetase [Synechococcus sp. PCC 7335] gi|196189117|gb|EDX84081.1| prolyl-tRNA synthetase [Synechococcus sp. PCC 7335] Length = 597 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 116/235 (49%), Positives = 153/235 (65%), Gaps = 4/235 (1%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 L+E+P +AEI SHKL+LR G + + + G+Y++LPL Q+ LD V+AI+REE N TG Sbjct: 1 MLFVTLREDPAEAEIPSHKLLLRAGYMRRIASGLYAYLPLLQRVLDKVSAIVREEMNATG 60 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 A E +P LQ A LW ESGR+D+Y K M L DR D+ + GPTHEEV+T I R I Sbjct: 61 AQECLLPQLQPASLWKESGRWDTYTKAEGIMFSLGDRRDQELALGPTHEEVITAIARDMI 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 +SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKD YSF E K +Y++M+ +Y Sbjct: 121 RSYKQLPLHLYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHTDAESLKATYDQMYRTYS 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 I R GL + A+SG IGG S EF+VLA+ GE +V ++D + E Sbjct: 181 NILRRTGLAFRAVEADSGAIGGSGSTEFMVLAEAGEDEVLYTEDGH-YSANVEKA 234 Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 58/195 (29%), Positives = 102/195 (52%), Gaps = 3/195 (1%) Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKG 304 + +++ P ++ + ++ RGIE+GHIF G KYS + AT+ Sbjct: 395 NWGKEFVLPQRRMDLRTAIAGDRAVHDPTQIIQTARGIEIGHIFQLGHKYSEALGATYTS 454 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 GK+ ++MG YG+G R+ A +E S+D GIIWP ++AP+ ++ D A Sbjct: 455 EQGKEVPLEMGCYGVGVSRLAQAAVEQSYDKNGIIWPVAIAPYHAIVVVPNIGDDDQMAA 514 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++Y L+ G + DD E+ G +F A+L+G P +V+ G + + KVE+ R G Sbjct: 515 AKQLYDDLNSAGVETLLDDRKERAGVKFKDAELVGIPFRVVTG-RSLKQGKVEVAKRANG 573 Query: 425 IREDMSLEEVINYAS 439 E+++L+E ++ Sbjct: 574 EVEEIALDEAVHTIK 588 >gi|124022453|ref|YP_001016760.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303] gi|152112941|sp|A2C7N5|SYP_PROM3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|123962739|gb|ABM77495.1| Prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303] Length = 599 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 113/240 (47%), Positives = 151/240 (62%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P DAEIASH+L+LR G I + + GIY++LPL + L + AI++EE Sbjct: 1 MRVSRLMLVTLRDVPADAEIASHQLLLRGGYIRRVTSGIYAYLPLMWRVLRKITAIVQEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + TGA+E +P LQ A+LW SGR+ Y M L DR + + GPTHEEV+T + Sbjct: 61 MDATGALETLLPQLQPAELWRRSGRWQGYTAGEGLMFHLEDRQGRELGLGPTHEEVITSL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP T YQIQ KFRDE+RPRFG+MR REF+MKDAYSF +Y M Sbjct: 121 AGDLLRSYRQLPVTLYQIQSKFRDEIRPRFGLMRGREFIMKDAYSFHACEADLAMTYTAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y RIF R GL+++ + A+SG IGG S EF+V AD GE + S D + + E Sbjct: 181 DEAYQRIFSRCGLETVAVEADSGAIGGASSQEFMVTADAGEDLILISGDGL-YAANQEKA 239 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 4/190 (2%) Query: 260 SDVHNEKLFDSLPENK---RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 D+ + D + RGIEVGHIF G KYS + A F G MG Sbjct: 407 VDLRKSQAGDRCIHDSSQILEERRGIEVGHIFQLGRKYSEALEACFTNDKGTQEPFWMGC 466 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R+ A +E HD G+ WP ++APF++ ++ D+V + E++Y+ L Sbjct: 467 YGIGISRLAQAAVEQHHDEAGMNWPLAIAPFEVIIVVANIQDEVQQKLAEQLYSELQAAD 526 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G +F ADL+G P +++VG + + +VE+ R + E +S + Sbjct: 527 IEVLLDDRNERAGVKFKDADLIGIPWRIVVG-RDAAKGQVELIQRSSRKVEILSATQAFT 585 Query: 437 YASHRFSNNR 446 + N+ Sbjct: 586 ALVQEIAANQ 595 >gi|298252610|ref|ZP_06976404.1| prolyl-tRNA synthetase [Gardnerella vaginalis 5-1] gi|297532974|gb|EFH71858.1| prolyl-tRNA synthetase [Gardnerella vaginalis 5-1] Length = 603 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 106/283 (37%), Positives = 155/283 (54%), Gaps = 2/283 (0%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+ FL L+E+P DA++ S KLM R G I + + G+++WLPLG K L+ V AIIR+E N Sbjct: 1 MSQLFLRTLREDPADADVTSAKLMQRAGYIRKSAPGVWTWLPLGLKVLNKVQAIIRDEIN 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+ P L + + + R++ YG + RL DR+ + PTHEEV T + + Sbjct: 61 GIGAQEVHFPALLPREPYEATNRWEEYGDNIFRLKDRHQADYLLAPTHEEVFTLLVKDMY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP T YQIQ K+RDE RPR G++R REF+M+DAYSF + +G K +Y + +Y Sbjct: 121 SSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMQDAYSFSIDEDGLKSAYVEERAAYA 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT--DFD 240 RIF RLG+K + + A SGP+GG S EF+ GE + + + + T D Sbjct: 181 RIFDRLGIKYVIVHAVSGPMGGSDSEEFLAPMPIGEDTFALAPSGKAWNVEALTTPEMQD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 S + P A T + + D P + + Sbjct: 241 VDYSATPAAQSLETPDAKTIEALVKVSNDLHPRKDGREWQASD 283 Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 4/208 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLP 297 +D + + V + + D P+ RG+E+G +F G KYS Sbjct: 394 EDGKHVYNAVYGRDFEADGVVEAAQVRDGDMSPDGSGPLSFERGVEIGQVFQLGLKYSKA 453 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + + +GK V MG YGIG RV+A + E+ HD G+ WP ++AP ++ ++ Sbjct: 454 LGLSVLNENGKAVPVWMGCYGIGVSRVIACLAETHHDDAGLAWPMAIAPAQVHVVATG-K 512 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 DQV DA EK+ LSK G +V +DD G +F A+L+G PL + G V++ + Sbjct: 513 DQVAFDAAEKVVEELSKQGIEVIFDDRPKVSPGVKFKDAELVGVPLIAVAGRDTVNNGTI 572 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSN 444 EI++R E + ++E R ++ Sbjct: 573 EIRNRDGSNVEAVPVDEAAARIVSRVND 600 >gi|328774228|gb|EGF84265.1| hypothetical protein BATDEDRAFT_8061 [Batrachochytrium dendrobatidis JAM81] Length = 581 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 72/448 (16%), Positives = 151/448 (33%), Gaps = 41/448 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 ++ L + + RD + K L S G +LP G + + + +R E + Sbjct: 155 EWTLQRQEASKRDHRLIGQKQSLF--YFSPLSLGAPFFLPHGTRIIQRLTDFLRHEYRKY 212 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + + LW +SG + +Y +++ + P + +F S +S Sbjct: 213 GFDEIVTPLVFNKSLWEKSGHWKNYKEDITVDQLNDADIQALKPMNCPGHCLLFSSTSRS 272 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + + R+E G+ R R+F D + F TP Sbjct: 273 YRDLPIRYAEFSPLHRNEASGALTGLTRVRKFHQDDGHIFC-TPSQIAQEIQSTLKFIDT 331 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ ++ A S E+ + + + Sbjct: 332 MYTKILHFPQYTLALSTRP---------------ESGHVGTLTQWEAAETALKEALTQFG 376 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 +I A Y D+ K+ D++ + + + ++ F +YS T Sbjct: 377 KPWTINHGDGAFYGPKIDI---KVRDAIGRDHQTATVQLDFQLPKQFQLQYSTGK--TGP 431 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G++ + A++ + G WP ++P + +I + Sbjct: 432 EDAAMETPVMIHRAVLGSVERMLAILA---EHYGGKWPFWMSPRQAIVIPTNK---TLNE 485 Query: 364 ACEKIYA------RL-----SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 + + L + DD + + A LL F ++VG K Sbjct: 486 YAQSVKNNIANPSELDGSNSCSAYYHIEVDDSDHLLSKRVREAQLLQFNYILVVGDKEQE 545 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYASH 440 V ++ R M+++++ + Sbjct: 546 TGTVNVRSRTGKQLGLMTVDQLRALFAK 573 >gi|261838989|gb|ACX98754.1| threonyl-tRNA synthetase [Helicobacter pylori 52] Length = 612 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 151/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ WLP G + + ++ + G Sbjct: 207 YLFQIEEAKKRDHRKLGVELGLFS-FDDEIGAGLPLWLPKGARLRKRIEDLLSKALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + L Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCS-----FEQIQSEVSAILDF 379 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + I + + T + + + + Sbjct: 380 --------------THKIMQAFDFSYEMELSTRPAKSIGDDKVWEKATSALKEALKEHRI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 GYKIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + Sbjct: 475 ERNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHHA 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + +A+ P+ +++G++ V + I+ R Sbjct: 529 FALKLKEVLKKCDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 589 QAQYKMPLKEFLNMVESKMQE 609 >gi|224613500|gb|ACN60329.1| Threonyl-tRNA synthetase, cytoplasmic [Salmo salar] Length = 383 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 74/413 (17%), Positives = 136/413 (32%), Gaps = 38/413 (9%) Query: 35 HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEML 94 S G +LP G + + I+ E R G E+ PTL S LW SG ++ Y + M Sbjct: 1 VSPGSCFFLPKGAHIYNTLADFIKTEYRRRGFHEVVTPTLYSTALWERSGHWEHYSENMF 60 Query: 95 RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSR 153 + P + +F ++S+R LP + R+EL G+ R R Sbjct: 61 TVTGDT-HTYALKPMNCPAHCLMFEQRVRSWRELPLRWADFGALHRNELSGALGGLTRVR 119 Query: 154 EFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVL 213 F DA+ F TPE + ++ G + + P H Sbjct: 120 RFCQDDAHIFC-TPEQLEEEIMACLDFVRSVYRVFGFSFHCL-LSTRPTPCLGEH----- 172 Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 D + A Y D+ ++ D++ Sbjct: 173 ------------ALWDHAEQQLERSLQQFGERWQLNPGDGAFYGPKIDI---QIKDAIGR 217 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 + + ++ F ++ L G V + +G++ + A++ Sbjct: 218 QHQCATIQLD----FQLPIRFDLQY---VGGDGETHRPVMVHRAVLGSLERMIAILA--- 267 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW-DDMGEQIGSQF 392 + G WP ++P ++ +I + + +++ + + G DD G + + Sbjct: 268 ENFGGKWPLWLSPAQVIIIPVGGGSET---YAQQVVRQFREAGFMADVDDDQGATLNKKI 324 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 A L + +VG K V ++ R EEV+ SH Sbjct: 325 RSAQLAQYNYIFVVGEKECESGTVSVRTRGGKQLGRRPTEEVLASLSHLRDTR 377 >gi|312195504|ref|YP_004015565.1| prolyl-tRNA synthetase [Frankia sp. EuI1c] gi|311226840|gb|ADP79695.1| prolyl-tRNA synthetase [Frankia sp. EuI1c] Length = 580 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 89/229 (38%), Positives = 142/229 (62%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+ F+ L+E+P DAE A+H+L++R G + + + GIYS+LPLG + L + A++R+E Sbjct: 13 LSRTFIRTLREDPADAETANHRLLVRGGYVRKAASGIYSYLPLGLRVLRRIEAVVRQEMA 72 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G E+ +P L +LW SGR+ YG M R+ DR GPTHEE++T + + + Sbjct: 73 AAGCQELLMPALMPRELWDRSGRWADYGDLMFRVVDRKGTEFCLGPTHEELITSLVANEL 132 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 +R+LP +QIQ K+RDELRPR G++RSR+F+MKDAY+F + + +Y +M+ +Y Sbjct: 133 GGHRDLPLRVFQIQTKYRDELRPRSGLVRSRDFVMKDAYTFHADEDSLRETYREMYAAYE 192 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 R+F R GL+ + A++G +GG + EF+ + GE V + + Sbjct: 193 RVFTRCGLRFRAVEAQAGEMGGGRNQEFMAPTEIGEDLVAFAPNGTYAA 241 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 64/182 (35%), Positives = 98/182 (53%), Gaps = 6/182 (3%) Query: 260 SDVHNEKLFDSLPE--NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +DV N + D+ P+ R +E+GHIF GT+YS+P+ ATF A G + MG Y Sbjct: 395 ADVVNVRAGDASPDDSGPLTLERAVEIGHIFQLGTRYSVPLGATFLDAAGVERPALMGCY 454 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++ VIE HD GI WP +AP+ + +I + D + L+ VG Sbjct: 455 GIGISRLMSVVIEQHHDEHGIRWPAELAPYDVQVIPLGRRVDE--DLVRSVADMLAGVGL 512 Query: 378 DVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD G G +FA ADL+G P QV++G + ++ E++ R +++L E+ N Sbjct: 513 EVLVDDRSGASAGVKFADADLIGAPFQVVLGRR-AAEGIAELRTRDRSTVTEVALTELTN 571 Query: 437 YA 438 Sbjct: 572 VI 573 >gi|283456070|ref|YP_003360634.1| ThrS Threonyl-tRNA synthetase [Bifidobacterium dentium Bd1] gi|283102704|gb|ADB09810.1| ThrS Threonyl-tRNA synthetase [Bifidobacterium dentium Bd1] Length = 677 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 65/459 (14%), Positives = 135/459 (29%), Gaps = 50/459 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L+E RD ++ L + + G+ + P G ++ + RE + Sbjct: 242 KAYQTRLEEAAKRDHRKLGAEMDLFS-FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRK 300 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHE 111 + P + L+ SG Y M + P + Sbjct: 301 HHYSFVQTPHITKGGLYETSGHLHWYKDGMYPAMRLDEEKDENGNIIKQGFDYYLKPMNC 360 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 361 PMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMK 420 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L + GL + + + S + + Sbjct: 421 DEL-KNLLTFVLGLLKDFGLDDFYLELST----------------KDPHKYVGSDEIWEE 463 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + A Y + + D++ +VS ++ F Sbjct: 464 ATNTLAEVAKESGLELVDDPCGAAFYGPKI---SVQARDAIGRTWQVSTIQLD----FNL 516 Query: 291 GTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 ++ + ADG + G++ AV+ + G W V + Sbjct: 517 PERF----KLEYIAADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGV 572 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 + ++ A L + D ++ G + A P +IVG + Sbjct: 573 PVA------DEFAPHLQRFIASLEEETVRCEIDMSDDRFGKKIRNASKSKVPFILIVGEE 626 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 ++++ V + R + ++E N V Sbjct: 627 DMNNNAVSFRFRDGSQLNGVPVDEAKNQIMTVLRKRVQV 665 >gi|254432589|ref|ZP_05046292.1| prolyl-tRNA synthetase [Cyanobium sp. PCC 7001] gi|197627042|gb|EDY39601.1| prolyl-tRNA synthetase [Cyanobium sp. PCC 7001] Length = 615 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 111/225 (49%), Positives = 147/225 (65%), Gaps = 3/225 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L+++P +AEI SHKL+LR G + + GIY++LPL + L V+AI+REE Sbjct: 1 MRVSRLMLVTLRDDPAEAEIPSHKLLLRAGYMRRIGSGIYAYLPLLWRVLRKVSAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + GA+E +P +Q A+LW SGR+ Y M L DR +AM GPTHEEV+T + Sbjct: 61 LDAIGALETLLPQMQPAELWQRSGRWSGYTDGEGIMFHLEDRQGRAMGLGPTHEEVVTAL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP T YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y M Sbjct: 121 AADLLRSYRQLPVTLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADEASLRRTYAAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 +Y RIF R GL+++ + A+SG IGG S EF+V AD GE V Sbjct: 181 DRAYARIFRRCGLRALAVEADSGAIGGSASQEFMVTADAGEDLVL 225 Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 102/196 (52%), Gaps = 4/196 (2%) Query: 254 APYAATSDVHNEKLFDSL---PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 P D+ + D P+ S+RGIEVGHIF G KYS M A+F G++ Sbjct: 409 CPLPEPLDLRAAQPGDRCVHDPDQCLQSSRGIEVGHIFQLGRKYSSAMEASFTNEAGEEE 468 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + MG YGIG R+ A +E HD +GI WP +APF++ ++ D E+IYA Sbjct: 469 PLWMGCYGIGVSRLAQAAVEQHHDDQGIRWPTPIAPFEVIVVVANGADATQAALGEQIYA 528 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 L + G D DD E+ G +F ADL+G P +V+VG + D +VE+ R G+R D++ Sbjct: 529 TLQQAGVDTLLDDRSERAGVKFKDADLIGIPWRVVVG-RGAPDGQVELVRRADGVRVDLA 587 Query: 431 LEEVINYASHRFSNNR 446 E ++ + R Sbjct: 588 AEALLERLLPALARER 603 >gi|149027311|gb|EDL82978.1| threonyl-tRNA synthetase, isoform CRA_b [Rattus norvegicus] Length = 433 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 150/445 (33%), Gaps = 44/445 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 16 KLLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNTLMEFIRSE 73 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + + P + +F Sbjct: 74 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSF-EVEKEQFALKPMNCPGHCLMFDH 132 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 133 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 191 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E A+ Sbjct: 192 FLRTVYSVFGFSFKLN-LSTRPEKFLGDIEIWNQAEK-----------------QLENSL 233 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 234 NEFGEKWELNPGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 282 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 283 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 338 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ V D D G + + A L + ++VG K + V Sbjct: 339 --TCDEYAQKVRQEFHDAKFMVDIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTV 396 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 I+ R + + ++ E + Sbjct: 397 NIRTRDNKVHGERTVGETVERLQQL 421 >gi|149027310|gb|EDL82977.1| threonyl-tRNA synthetase, isoform CRA_a [Rattus norvegicus] Length = 722 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 150/445 (33%), Gaps = 44/445 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 305 KLLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNTLMEFIRSE 362 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + + P + +F Sbjct: 363 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSF-EVEKEQFALKPMNCPGHCLMFDH 421 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 422 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 480 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E A+ Sbjct: 481 FLRTVYSVFGFSFKLN-LSTRPEKFLGDIEIWNQAEK-----------------QLENSL 522 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 523 NEFGEKWELNPGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 571 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 572 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 627 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ V D D G + + A L + ++VG K + V Sbjct: 628 --TCDEYAQKVRQEFHDAKFMVDIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTV 685 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 I+ R + + ++ E + Sbjct: 686 NIRTRDNKVHGERTVGETVERLQQL 710 >gi|227488772|ref|ZP_03919088.1| threonine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51867] gi|227542231|ref|ZP_03972280.1| threonine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51866] gi|227091194|gb|EEI26506.1| threonine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51867] gi|227182060|gb|EEI63032.1| threonine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51866] Length = 689 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 63/454 (13%), Positives = 134/454 (29%), Gaps = 48/454 (10%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + + G + P G + R G Sbjct: 258 YLTMLEEAEKRDHRRLGQELDLFS-FPDEIGSGFPVFHPDGGIIRLEMEEHSRRRHLENG 316 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND------------KAMIYGPTHEEV 113 ++ P + DL+ +SG D Y M + + P + + Sbjct: 317 YSFVNTPHITKGDLFQKSGHLDFYADGMFPPMQLDGEYDEDGNCTKQPQDYYAKPMNCPM 376 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKH 172 I+ S +SYR LP ++ +R E G+ R+R F DA+ + T E + Sbjct: 377 HNLIYASRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYC-TEEQLED 435 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 + L + GL + + + S + + Sbjct: 436 ELTGVLNFILSLLKDYGLNDFYLELST----------------KDPNKFVGSDEIWEKST 479 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 A Y + + D++ ++S ++ F Sbjct: 480 AILERVAKASGLELVPDPAGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FNLPE 532 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 ++ L +A+ K + + G++ V+ + G W I + Sbjct: 533 RFELEYTAS---DGSKKRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVTGIPVA 589 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 D E + +L G D +++ + P ++ G++ Sbjct: 590 ------DEFVDYLEGVIGKLKAQGIRAEVDTSDDRMQKKIRNHTTGKVPFMLLAGARDQE 643 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 V + + ++ + + + + Sbjct: 644 AGAVSFRFLDGSQVNGVPADKAVEIITSWVRSRK 677 >gi|210134324|ref|YP_002300763.1| threonyl-tRNA synthetase [Helicobacter pylori P12] gi|238065114|sp|B6JPM2|SYT_HELP2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|210132292|gb|ACJ07283.1| threonyl-tRNA synthetase [Helicobacter pylori P12] Length = 612 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 79/441 (17%), Positives = 152/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ WLP G + + ++ + G Sbjct: 207 YLFQIEEAKKRDHRKLGVELGLFS-FDDEIGAGLPLWLPKGARLRKRIEDLLSQALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + + + Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQSE--VSAILDFTHK 382 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + S M + P E + + + Sbjct: 383 IMQAFDFSYEMELSTRPAKSIGDDE-----------------VWEKATSALKEALKEHRI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 DYKIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + Sbjct: 475 ERNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHHV 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + +A+ P+ +++G++ V + I+ R Sbjct: 529 FALKLKEVLKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 589 QAQYKMPLKEFLNMVESKMQE 609 >gi|323450323|gb|EGB06205.1| hypothetical protein AURANDRAFT_29703 [Aureococcus anophagefferens] Length = 750 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 69/431 (16%), Positives = 133/431 (30%), Gaps = 39/431 (9%) Query: 12 QENPRDAEIAS--HKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + RD KL Q S G + P G + + + A I+++ E+ Sbjct: 324 EAAKRDHRKVGGAQKL----FFFDQLSPGSAFFEPHGARIYNGLIAFIKDQYWLREYTEV 379 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P + + DLW SG Y +M D P + +F+ ++S+R+LP Sbjct: 380 VTPNVYNFDLWHTSGHALHYKDDMF-CFDVEGAEFGMKPMNCPGHCLMFKHDVRSWRDLP 438 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 + + R+EL G+ R R F D + F + + ++ Sbjct: 439 MRYADFGVLHRNELSGALSGLTRVRRFQQDDGHIFCR-EDQVEEEVRGALEFMKHVYDVF 497 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL--N 246 G+ + + P + K D + + D Sbjct: 498 GMGYR-LELSTRP-----------------KKALGDKAVWDRAEAALASAMDAFAGKGGW 539 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 + A Y D+ K+ D+L + + ++ F KY + ++ +G Sbjct: 540 RVNPGDGAFYGPKIDI---KVTDALERVHQCATIQLDFQLPIRFDLKYRVGDTSGEEGGA 596 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACE 366 + + R++A + E D Sbjct: 597 VTRPIIIHRAMLGSVERMMAVLTEHWGGKWPFWISPRQVCVIPVGPT-------NFDYAR 649 Query: 367 KIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + + V DD G + + A L + ++VG VSD V ++ R + Sbjct: 650 AVRKTIRAARFFVDVDDSGNTLPKKVRNAQLAQYNFILVVGDNEVSDGTVTVRTRANTVE 709 Query: 427 EDMSLEEVINY 437 + L + + Sbjct: 710 GTVPLADFVAR 720 >gi|256847045|ref|ZP_05552491.1| prolyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN] gi|256715709|gb|EEU30684.1| prolyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN] Length = 577 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 111/237 (46%), Positives = 146/237 (61%), Gaps = 2/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P +E P DAE SHK+M+R G I+Q S G++S+LPL + + V AIIREE Sbjct: 1 MKQSKILIPTKKEAPSDAEALSHKMMIRAGYIYQVSSGVWSYLPLAYRVIRKVKAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A EM P++ ADLW ++GRY++YG + + DRND+ I GPT EEVMT+I R Sbjct: 61 MEKADAFEMETPSMLPADLWQQTGRYEAYGDTLFKFKDRNDREHILGPTDEEVMTEILRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQI KFRDE RPRFGV+R +EF M D YSF G +YN+ + Sbjct: 121 SIKSYKKLPLTVYQITDKFRDEPRPRFGVLRGKEFSMLDGYSFAADQAGLDEAYNQQAQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF R+GL + A+SG IGGD S EF A GE + + D+ E Sbjct: 181 YRNIFDRIGLDYKIILADSGTIGGDNSQEFSAPAKVGEDTIVYTDG--DYAANLEKA 235 Score = 157 bits (398), Expect = 3e-36, Method: Composition-based stats. Identities = 68/184 (36%), Positives = 97/184 (52%), Gaps = 2/184 (1%) Query: 261 DVHNEKLFDSLPENK-RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 D + + P+ GIE+GHIF GT YS + A +G+ + MG YGI Sbjct: 387 DFRTVQEGEIAPDGNPIKFTNGIEIGHIFKLGTGYSEKLGAQVLDQNGRLVDMIMGCYGI 446 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G R+++AV E + D G++WPDS+APF + +I + A +I +L K G +V Sbjct: 447 GVTRLLSAVAEQNADEYGLVWPDSIAPFDVHVIPVNAKKADQMKMANEISEQLEKAGLEV 506 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 DD E+ G +FA +DL+G PL+V VG K S+ VEIK R TG ++ EEV N Sbjct: 507 LVDDRKERAGVKFADSDLIGIPLRVTVGKK-ASEGIVEIKIRKTGETVEVKTEEVANTVQ 565 Query: 440 HRFS 443 Sbjct: 566 ILLK 569 >gi|299745880|ref|XP_001841372.2| tars protein [Coprinopsis cinerea okayama7#130] gi|298406796|gb|EAU80442.2| tars protein [Coprinopsis cinerea okayama7#130] Length = 720 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 74/451 (16%), Positives = 150/451 (33%), Gaps = 45/451 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S+Y + + RD + L + S G WLP G + + + ++REE Sbjct: 302 LSEYKKFLEEAAKRDHRKIGREQEL--WFFNDLSPGSCFWLPHGTRIYNTLVELMREEYF 359 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G E+ P + ++ LW SG + +Y ++M L D + P + IF S Sbjct: 360 KRGYQEVISPNMYNSKLWETSGHWQNYKEDMFTL-DVEKEKWALKPMNCPGHCLIFDSRD 418 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY+ LP + + R+E G+ R R F+ D + F + P + + +F Sbjct: 419 RSYKELPIRMAEFGIIHRNEASGALTGLTRVRRFVQDDTHVFCM-PSQLEDEISALFDFM 477 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I G EF + T + + + Sbjct: 478 RH------------------IYGLFGFEFHLELSTRPENFLGEIETWNQAEDQLKQALEK 519 Query: 242 I-ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + A Y D+ + D+L + + + ++ F +++L + Sbjct: 520 HYPGQWELNPGDGAFYGPKIDI---TIRDALKRSFQCATIQLD----FQLPERFNLKYRS 572 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD-GKGIIWPDSVAPFKISLINIKAHDQ 359 V + +G++ A++ K Sbjct: 573 A--DESELTRPVIIHRAILGSLERFVAIVTEHFAGKWPFWLSPRQILVIPVAAPYK---- 626 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + +I RL+ +G D+ + + ++ + ++VG + + V ++ Sbjct: 627 ---EYAAEIANRLTSLGLYADVDNGENTLPKKIRNGEIAQYNFILVVGQEELDARSVNVR 683 Query: 420 HRLT-GIR---EDMSLEEVINYASHRFSNNR 446 +R G + + + LE VI R Sbjct: 684 NRDDVGTKAKGQMVPLETVIEQFVSLKKERR 714 >gi|23466273|ref|NP_696876.1| prolyl-tRNA synthetase [Bifidobacterium longum NCC2705] gi|227546627|ref|ZP_03976676.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|81847214|sp|Q8G3N0|SYP_BIFLO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|23327022|gb|AAN25512.1| prolyl-tRNA synthetase [Bifidobacterium longum NCC2705] gi|227212944|gb|EEI80823.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|291516313|emb|CBK69929.1| prolyl-tRNA synthetase, family II [Bifidobacterium longum subsp. longum F8] Length = 597 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 106/283 (37%), Positives = 155/283 (54%), Gaps = 2/283 (0%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S FL L+E+P DA++ S KL+ R G I + + GI++WLPLG + L+ + AIIREE N Sbjct: 1 MSTMFLRTLREDPADADVDSAKLLQRAGYIRKAAPGIWTWLPLGLRVLNKIEAIIREEIN 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+ P L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 61 GIGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDMY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG + +Y +Y Sbjct: 121 SSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFVMKDAYSFTIDEEGMRKAYYDERGAYE 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF--D 240 RIF RL LK +P+ A SGP+GG S EF+ GE + + + + +T + Sbjct: 181 RIFQRLDLKYVPVFAMSGPMGGSASEEFLAPMPIGEDTFALAPSGKAWNVEALSTPELPE 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 S + P A T D E+ P + + Sbjct: 241 IDASTTPAASKEATPDAKTIDNMIERANADHPRTDGREWQASD 283 Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 4/191 (2%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLP 297 ++ + ++V + + D P+ RG+E+G +F G KYS Sbjct: 389 ENEVDYYNLVYGRDFKVDGVVEAVEVRHGDMSPDGSGPLSFERGVEIGQVFQLGLKYSKA 448 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + +GK V MG YGIG RV+A + E+ HD G+ W SV + Sbjct: 449 LDLKVLDQNGKAVPVWMGCYGIGVSRVLACIAETHHDEAGLAW-PSVIAPAAVHVVATGK 507 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D V + EK+ A L G +V +DD + G +F A+L+G PL +VG +V+D + Sbjct: 508 DAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFKDAELIGVPLVAVVGRDYVNDGTI 567 Query: 417 EIKHRLTGIRE 427 E++ R + Sbjct: 568 ELRDRNGENKV 578 >gi|320580027|gb|EFW94250.1| Threonyl-tRNA synthetase [Pichia angusta DL-1] Length = 714 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 75/451 (16%), Positives = 155/451 (34%), Gaps = 43/451 (9%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + + RD + L H+ S G WLP G + + + ++R + Sbjct: 297 MK--EHLKFLEEAAARDHRKIGREQDLF--FFHEMSPGSCFWLPHGARIYNGLCELLRTQ 352 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW SG + +Y + M D P + +F+S Sbjct: 353 YRKRGYEEVITPNMYNSKLWETSGHWANYKENMFTFEVEKDT-FGLKPMNCPGHCLMFKS 411 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SYR LP+ + R+E G+ R R F DA+ F T + + + +F Sbjct: 412 RERSYRELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFC-TQDQIEDEISGVFD 470 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 I G EF + T + + + + Sbjct: 471 FLQH------------------IYGIFGFEFKMELSTRPEKYVGDIETWNNAEAKLESAL 512 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + A Y D+ + D+L + + ++ F ++ L Sbjct: 513 NKWGGKWELNPGDGAFYGPKIDIM---ISDALKRWHQCATIQLD----FQLPNRFELEFR 565 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + V + +G++ + A++ + WP ++P +I ++ + Sbjct: 566 GK-DDSAEVQRPVMIHRAILGSIERMTAILT---EHFAGKWPFWLSPRQILVVPVGVR-- 619 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D +++ L G D G + + L + IVG + ++ V I+ Sbjct: 620 -YFDYAQEVQKLLQTEGFYADVDLSGNTLQKKVRTGQLQKYNFIFIVGEQEQNEKAVNIR 678 Query: 420 HRLTGIRED----MSLEEVINYASHRFSNNR 446 +R + + L +V+ R Sbjct: 679 NRDIQELQSKNDMVKLNDVLPKLHALRDEKR 709 >gi|225352131|ref|ZP_03743154.1| hypothetical protein BIFPSEUDO_03746 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157378|gb|EEG70717.1| hypothetical protein BIFPSEUDO_03746 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 677 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 65/459 (14%), Positives = 133/459 (28%), Gaps = 50/459 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L+E RD ++ L + + G+ + P G ++ + RE + Sbjct: 242 KAYQTRLEEAAKRDHRKLGAEMDLFS-FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRK 300 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHE 111 + P + L+ SG Y M + P + Sbjct: 301 HHYSFVQTPHITKGGLYETSGHLHWYKDGMYPAMRLDEEKDENGNVVKQGFDYYLKPMNC 360 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 361 PMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMK 420 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L + GL + + + S + + Sbjct: 421 DEL-KNLLTFVLGLLKDFGLDDFYLELST----------------KDPHKYVGSDEIWEE 463 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + A Y + + D++ +VS ++ F Sbjct: 464 ATNTLAEVAKESGLELVDDPCGAAFYGPKI---SVQARDAIGRTWQVSTIQLDFNLPERF 520 Query: 291 GTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 G + ADG + G++ AV+ + G W V + Sbjct: 521 G--------LEYIAADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGV 572 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 + ++ A L + D ++ G + A P +IVG + Sbjct: 573 PVA------DEFAPHLQQFIASLEEETVRCEIDMSDDRFGKKIRNASKSKVPFILIVGEE 626 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 ++++ V + R + ++E V Sbjct: 627 DMNNNAVSFRFRDGSQLNGVPVDEAKAQIMTVLKKRVQV 665 >gi|209879794|ref|XP_002141337.1| threonyl-tRNA synthetase family protein [Cryptosporidium muris RN66] gi|209556943|gb|EEA06988.1| threonyl-tRNA synthetase family protein [Cryptosporidium muris RN66] Length = 743 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 82/439 (18%), Positives = 142/439 (32%), Gaps = 30/439 (6%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 ++ L+E RD + L L S G WLP G + + + IR E G Sbjct: 319 YIEFLEEVKKRDHRVIGSNLNLF-FFDTNASVGSCFWLPPGARIYNKMIEFIRSEYRIRG 377 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + S DLW SG Y +Y + M L + K P + IFR SY Sbjct: 378 FEEVVTPNIFSCDLWKTSGHYFAYKENMF-LFEVEKKEWGLKPMNCPGHCIIFRHMNPSY 436 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 + LP + R+EL G+ R R F DA+ F + + + Sbjct: 437 KQLPIRMADFGVLHRNELSGALNGLTRVRRFQQDDAHIFCTAEQIQSEVFA-ALEFLFFV 495 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + +LG F + T + +++ + S + Sbjct: 496 YDKLGFS------------------FNLYLGTMPKEHLGTREKWEDAENSLKLALNRTGY 537 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTKYSLPMSATF 302 + E A Y D+ L+D+L + ++ F + + Sbjct: 538 QWKVNEGDGAFYGPKIDIM---LWDALKRPHQCGTIQLDFQLPIRFNLQYRSDDNILTEG 594 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVC 361 + + + R + IE + + I + Sbjct: 595 GDHNLDEELKPGYKRPVIIHRAILGSIERMVAVILENTGGKLPFWLSPRQAIVLPISEKS 654 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D + I + L +G DV D I + A LL + +IVG + ++ R Sbjct: 655 HDYAKSIESELCCMGYDVGADYSSSTINRKIREAQLLQWNFMLIVGENEAKSGSITVRSR 714 Query: 422 LTGI-REDMSLEEVINYAS 439 + + +M L ++I Sbjct: 715 DSSTSQRNMILSDLIAEFK 733 >gi|114559283|ref|XP_001168777.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 3 [Pan troglodytes] Length = 666 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 85/457 (18%), Positives = 145/457 (31%), Gaps = 57/457 (12%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + RD + L H+ S G +LP G + + + A IR E G E+ Sbjct: 242 REEAELRDHRRIGKEQELF--FFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEV 299 Query: 70 SVPTLQSADLWVESGRYDSYGKEML----------------RLADRNDKAMIYGPTHEEV 113 PTL S LW +SG ++ Y ++M + P + Sbjct: 300 KTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPA 359 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 +F +S+R LP R E G+ R R F DA+ F T + Sbjct: 360 HCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAE 419 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 ++ LG + P G D Sbjct: 420 -IQSCLDFLRSVYAVLGFSFRLA-LSTRPSGF-----------------LGDPCLWDQAE 460 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y DVH L D+L + ++ F Sbjct: 461 QVLKQALKEFGEPWDLNSGDGAFYGPKIDVH---LHDALGRPHQCGTIQLD----FQLPL 513 Query: 293 KYSLPMSATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 ++ +KG G + V + +G++ + V+ + G WP ++PF++ + Sbjct: 514 RFD----LQYKGQAGALERPVLIHRAVLGSVERLLGVLA---ESCGGKWPLWLSPFQVVV 566 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKF 410 I + + + + ++ L G D D G + + A L + Q +VG K Sbjct: 567 IPVGSEQE---EYAKEAQQSLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQFVVGQKE 623 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 S V I+ R + L E + + P Sbjct: 624 QSKRTVNIRTRDNRRLGEWDLPEAVQRLVELQNTRVP 660 >gi|114559277|ref|XP_001168750.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 2 [Pan troglodytes] Length = 635 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 85/457 (18%), Positives = 145/457 (31%), Gaps = 57/457 (12%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + RD + L H+ S G +LP G + + + A IR E G E+ Sbjct: 211 REEAELRDHRRIGKEQELF--FFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEV 268 Query: 70 SVPTLQSADLWVESGRYDSYGKEML----------------RLADRNDKAMIYGPTHEEV 113 PTL S LW +SG ++ Y ++M + P + Sbjct: 269 KTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPA 328 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 +F +S+R LP R E G+ R R F DA+ F T + Sbjct: 329 HCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAE 388 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 ++ LG + P G D Sbjct: 389 -IQSCLDFLRSVYAVLGFSFRLA-LSTRPSGF-----------------LGDPCLWDQAE 429 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y DVH L D+L + ++ F Sbjct: 430 QVLKQALKEFGEPWDLNSGDGAFYGPKIDVH---LHDALGRPHQCGTIQLD----FQLPL 482 Query: 293 KYSLPMSATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 ++ +KG G + V + +G++ + V+ + G WP ++PF++ + Sbjct: 483 RFD----LQYKGQAGALERPVLIHRAVLGSVERLLGVLA---ESCGGKWPLWLSPFQVVV 535 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKF 410 I + + + + ++ L G D D G + + A L + Q +VG K Sbjct: 536 IPVGSEQE---EYAKEAQQSLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQFVVGQKE 592 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 S V I+ R + L E + + P Sbjct: 593 QSKRTVNIRTRDNRRLGEWDLPEAVQRLVELQNTRVP 629 >gi|114559279|ref|XP_001168807.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 4 [Pan troglodytes] Length = 657 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 85/457 (18%), Positives = 145/457 (31%), Gaps = 57/457 (12%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + RD + L H+ S G +LP G + + + A IR E G E+ Sbjct: 233 REEAELRDHRRIGKEQELF--FFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEV 290 Query: 70 SVPTLQSADLWVESGRYDSYGKEML----------------RLADRNDKAMIYGPTHEEV 113 PTL S LW +SG ++ Y ++M + P + Sbjct: 291 KTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPA 350 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 +F +S+R LP R E G+ R R F DA+ F T + Sbjct: 351 HCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAE 410 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 ++ LG + P G D Sbjct: 411 -IQSCLDFLRSVYAVLGFSFRLA-LSTRPSGF-----------------LGDPCLWDQAE 451 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y DVH L D+L + ++ F Sbjct: 452 QVLKQALKEFGEPWDLNSGDGAFYGPKIDVH---LHDALGRPHQCGTIQLD----FQLPL 504 Query: 293 KYSLPMSATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 ++ +KG G + V + +G++ + V+ + G WP ++PF++ + Sbjct: 505 RFD----LQYKGQAGALERPVLIHRAVLGSVERLLGVLA---ESCGGKWPLWLSPFQVVV 557 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKF 410 I + + + + ++ L G D D G + + A L + Q +VG K Sbjct: 558 IPVGSEQE---EYAKEAQQSLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQFVVGQKE 614 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 S V I+ R + L E + + P Sbjct: 615 QSKRTVNIRTRDNRRLGEWDLPEAVQRLVELQNTRVP 651 >gi|114559269|ref|XP_001168944.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 9 [Pan troglodytes] Length = 718 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 85/457 (18%), Positives = 145/457 (31%), Gaps = 57/457 (12%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + RD + L H+ S G +LP G + + + A IR E G E+ Sbjct: 294 REEAELRDHRRIGKEQELF--FFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEV 351 Query: 70 SVPTLQSADLWVESGRYDSYGKEML----------------RLADRNDKAMIYGPTHEEV 113 PTL S LW +SG ++ Y ++M + P + Sbjct: 352 KTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPA 411 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 +F +S+R LP R E G+ R R F DA+ F T + Sbjct: 412 HCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAE 471 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 ++ LG + P G D Sbjct: 472 -IQSCLDFLRSVYAVLGFSFRLA-LSTRPSGF-----------------LGDPCLWDQAE 512 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y DVH L D+L + ++ F Sbjct: 513 QVLKQALKEFGEPWDLNSGDGAFYGPKIDVH---LHDALGRPHQCGTIQLD----FQLPL 565 Query: 293 KYSLPMSATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 ++ +KG G + V + +G++ + V+ + G WP ++PF++ + Sbjct: 566 RFD----LQYKGQAGALERPVLIHRAVLGSVERLLGVLA---ESCGGKWPLWLSPFQVVV 618 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKF 410 I + + + + ++ L G D D G + + A L + Q +VG K Sbjct: 619 IPVGSEQE---EYAKEAQQSLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQFVVGQKE 675 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 S V I+ R + L E + + P Sbjct: 676 QSKRTVNIRTRDNRRLGEWDLPEAVQRLVELQNTRVP 712 >gi|39644807|gb|AAH07824.2| TARS2 protein [Homo sapiens] Length = 709 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 85/457 (18%), Positives = 145/457 (31%), Gaps = 57/457 (12%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + RD + L H+ S G +LP G + + + A IR E G E+ Sbjct: 285 REEAELRDHRRIGKEQELF--FFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEV 342 Query: 70 SVPTLQSADLWVESGRYDSYGKEML----------------RLADRNDKAMIYGPTHEEV 113 PTL S LW +SG ++ Y ++M + P + Sbjct: 343 KTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPA 402 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 +F +S+R LP R E G+ R R F DA+ F T + Sbjct: 403 HCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAE 462 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 ++ LG + P G D Sbjct: 463 -IQSCLDFLRSVYAVLGFSFRLA-LSTRPSGF-----------------LGDPCLWDQAE 503 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y DVH L D+L + ++ F Sbjct: 504 QVLKQALKEFGEPWDLNSGDGAFYGPKIDVH---LHDALGRPHQCGTIQLD----FQLPL 556 Query: 293 KYSLPMSATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 ++ +KG G + V + +G++ + V+ + G WP ++PF++ + Sbjct: 557 RFD----LQYKGQAGALERPVLIHRAVLGSVERLLGVLA---ESCGGKWPLWLSPFQVVV 609 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKF 410 I + + + + ++ L G D D G + + A L + Q +VG K Sbjct: 610 IPVGSEQE---EYAKEAQQSLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQFVVGQKE 666 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 S V I+ R + L E + + P Sbjct: 667 QSKRTVNIRTRDNRRLGEWDLPEAVQRLVELQNTRVP 703 >gi|20070344|ref|NP_079426.2| threonyl-tRNA synthetase, mitochondrial precursor [Homo sapiens] gi|74752395|sp|Q9BW92|SYTM_HUMAN RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName: Full=Threonine--tRNA ligase; Short=ThrRS; AltName: Full=Threonyl-tRNA synthetase-like 1; Flags: Precursor gi|12802990|gb|AAH00541.1| Threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens] gi|14603040|gb|AAH09997.1| Threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens] gi|55958996|emb|CAI15488.1| threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens] gi|119573933|gb|EAW53548.1| threonyl-tRNA synthetase-like 1, isoform CRA_a [Homo sapiens] gi|168275836|dbj|BAG10638.1| threonyl-tRNA synthetase [synthetic construct] Length = 718 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 85/457 (18%), Positives = 145/457 (31%), Gaps = 57/457 (12%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + RD + L H+ S G +LP G + + + A IR E G E+ Sbjct: 294 REEAELRDHRRIGKEQELF--FFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEV 351 Query: 70 SVPTLQSADLWVESGRYDSYGKEML----------------RLADRNDKAMIYGPTHEEV 113 PTL S LW +SG ++ Y ++M + P + Sbjct: 352 KTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPA 411 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 +F +S+R LP R E G+ R R F DA+ F T + Sbjct: 412 HCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAE 471 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 ++ LG + P G D Sbjct: 472 -IQSCLDFLRSVYAVLGFSFRLA-LSTRPSGF-----------------LGDPCLWDQAE 512 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y DVH L D+L + ++ F Sbjct: 513 QVLKQALKEFGEPWDLNSGDGAFYGPKIDVH---LHDALGRPHQCGTIQLD----FQLPL 565 Query: 293 KYSLPMSATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 ++ +KG G + V + +G++ + V+ + G WP ++PF++ + Sbjct: 566 RFD----LQYKGQAGALERPVLIHRAVLGSVERLLGVLA---ESCGGKWPLWLSPFQVVV 618 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKF 410 I + + + + ++ L G D D G + + A L + Q +VG K Sbjct: 619 IPVGSEQE---EYAKEAQQSLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQFVVGQKE 675 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 S V I+ R + L E + + P Sbjct: 676 QSKRTVNIRTRDNRRLGEWDLPEAVQRLVELQNTRVP 712 >gi|307179779|gb|EFN67969.1| Probable prolyl-tRNA synthetase, mitochondrial [Camponotus floridanus] Length = 422 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 128/444 (28%), Positives = 214/444 (48%), Gaps = 44/444 (9%) Query: 3 RSKYFLPILQE-----NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAII 57 SK F P+ E + + SHKLM++ G+I + G+Y+ LPLG + L+ + ++ Sbjct: 1 MSKIFQPMATELSDTGDKTEI-SRSHKLMIKYGIIKPCNVGMYALLPLGMRVLNKLINLV 59 Query: 58 REEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMT-D 116 +E GA ++ +P L S LW ++ RYDS E+ + DR++K I PT+EE + Sbjct: 60 DKEMTNLGAEKILLPALTSTSLWKKTNRYDSNKNELFTIKDRHEKEYILSPTYEEAICDL 119 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 I + S + LP YQI K+RDE++PR G +RSREF+MKD Y+FD + ++++Y+ Sbjct: 120 ISSTGSLSTKLLPLRLYQISSKWRDEMKPRLGFLRSREFIMKDLYTFDTNLDNAQYTYDL 179 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + SY IF ++G+K + + G IGG +SHE+ +++ GE + Sbjct: 180 VCESYNNIFKQIGIKYEKVIGDVGTIGGLISHEYHYISNIGEDVILQCPSC--------- 230 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 Y + + ++ +N+ E+GH F KYS Sbjct: 231 -------------------YFSINQTISKTTNCPQCKNELQRHIAAEIGHTFLLNIKYSQ 271 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 P+ A + + V MG +G+G R++ IE I WP +AP+ + +I KA Sbjct: 272 PLKAMYV-EQNELKPVVMGCFGLGLSRIIMLTIEILSTINEIRWPVKLAPYTVCIIPPKA 330 Query: 357 --HDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGS---KF 410 ++ E++ L K D DD IG +F +A LGFP +I+G + Sbjct: 331 GSKEENSSKYIEQLSEILCKRDIDTVLDDRTHLTIGKRFVLARALGFPYIIIIGKASTRS 390 Query: 411 VSDSKVEIKHRLTGIREDMSLEEV 434 + E+ + ++SLE++ Sbjct: 391 IP--SFEVHDINNSVTNELSLEQI 412 >gi|297379344|gb|ADI34231.1| threonyl-tRNA synthetase [Helicobacter pylori v225d] Length = 612 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 78/441 (17%), Positives = 150/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + + G+ WLP G + + ++ + G Sbjct: 207 YLFQIEEAKKRDHRKLGVELGLFS-FDDEIGAGLPLWLPKGARLRKRIEDLLSKALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + L Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCS-----FEQIQSEVSAILDF 379 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + I + + T + + + + Sbjct: 380 --------------THKIMQAFDFSYEMELSTRPAKSIGDDKVWEKATNALKEALKEHRI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 DYKIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + Sbjct: 475 EYNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHHV 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + A+ P+ +++G++ V + I+ R Sbjct: 529 FALKLKEALKKRDIFVEVLDKNDSLNKKVRSAEKQKIPMILVLGNEEVGTEILSIRDREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 589 QAQYKMPLKEFLNMVESKMQE 609 >gi|16553656|dbj|BAB71554.1| unnamed protein product [Homo sapiens] Length = 433 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 69/446 (15%), Positives = 144/446 (32%), Gaps = 38/446 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + + + +E RD + L H S G +LP G + + IREE Sbjct: 16 KMMRDWEKFQEEAKNRDHRKIGKEQELF--FFHDLSPGSCFFLPRGAFIYNTLTDFIREE 73 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ E+ P + ++ LW SG + Y + M D P + +F Sbjct: 74 YHKRDFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIEKDT-FALKPMNCPGHCLMFAH 132 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +S+R +P + R+EL + +D T E + Sbjct: 133 RPRSWREMPIRCADFGVLHRNELSGTLSGLTGVRRFQQDDAHIFCTVEQIEEEIKGCLQF 192 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++ G F + T + + Sbjct: 193 LQSVYSTFGFS------------------FQLNLSTRPENFLGEIEMWNEAEKQLQNSLM 234 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D + A Y D+ K+ D++ + + ++ F +++L + Sbjct: 235 DFGEPWKMNPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRFNLTYVS 287 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 D K V + +G++ + A++ + G WP ++P ++ +I + Sbjct: 288 K--DGDDKKRPVIIHRAILGSVERMIAILS---ENYGGKWPFWLSPRQVMVIPVGP---T 339 Query: 361 CRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 C ++ + + G D D + + A L + ++VG K D+ V ++ Sbjct: 340 CEKYALQVSSEFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNVR 399 Query: 420 HRLTGIREDMSLEEVINYASHRFSNN 445 R I ++ + I+ + Sbjct: 400 TRDNKIHGEILVTSAIDKLKNLRKTR 425 >gi|284925806|gb|ADC28158.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902] Length = 569 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 111/271 (40%), Positives = 159/271 (58%), Gaps = 4/271 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + S+ + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 2 MRFTKFYAPSLKEAPKDASLPSYIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 62 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 122 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL + A+SG IGG S EF+VLA GE + ++ D+ E Sbjct: 182 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICENC-DYAANVEAA--- 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 E+ A YA+ N K DSL Sbjct: 238 KRAKKTCQDERPEANYASKFHTPNIKTIDSL 268 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 6/223 (2%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS---DVHNEKLFDSLPEN--KRVSA 279 ++DF + +E + + D+ K D + K + Sbjct: 347 DFYIDFELENEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLIEVKEGDCCVKCGAKLKQS 406 Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF G KYS M+A F +GK MG YGIG R++A E+SHD KG I Sbjct: 407 KGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVATEASHDEKGCI 466 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W ++APF + +I D+ + K+Y L+ +G +V DD E+ G + +L+G Sbjct: 467 WNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVKMNDFELMG 526 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 FP ++VG K + +++E+ R I+E + +E++ + Sbjct: 527 FPYALVVG-KGLEKNEIELIQREGLIKELIKTDELMEILKKKV 568 >gi|149409915|ref|XP_001508543.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 719 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 74/447 (16%), Positives = 149/447 (33%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 302 KLLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNTLIEFIRSE 359 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + P + +F Sbjct: 360 YRKRGFQEVVTPNIYNSKLWLTSGHWQHYSENMFSFEVEKEI-FALKPMNCPGHCLMFDH 418 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + + Sbjct: 419 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQ-IEEEIKSCLD 477 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E A+ Sbjct: 478 FLKTVYDVFGFSFKLN-LSTRPEKFLGDIEVWNQAEK-----------------QLENSL 519 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + A Y D+ ++ D++ + + ++ F +++L Sbjct: 520 IEFGEKWELNPGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRFNLTFV 572 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 573 SH--DGDDKKRPVIVHRAILGSVERMIAILT---ENFGGKWPLWLSPRQVMVVPVGP--- 624 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C D +K+ + D D G + + A L + ++VG K + V I Sbjct: 625 TCDDYAQKVRQQFHDAQLMTDVDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKTSGTVNI 684 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R + + ++ E I + Sbjct: 685 RTRDNKVHGERTISETIERLQQLKQSR 711 >gi|298491630|ref|YP_003721807.1| threonyl-tRNA synthetase ['Nostoc azollae' 0708] gi|298233548|gb|ADI64684.1| threonyl-tRNA synthetase ['Nostoc azollae' 0708] Length = 606 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 74/440 (16%), Positives = 153/440 (34%), Gaps = 39/440 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L G+ W P G + +++EQ + G + + Sbjct: 195 EALRRDHRKLGKELGLFI-FADPVGPGLPLWTPKGTLLRTILEDFLKKEQLKRGYLTVVT 253 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKA------MIYGPTHEEVMTDIFRSHIKSY 125 P + DL+ SG + Y +++ L + +A + P + I++ ++SY Sbjct: 254 PHIARVDLFKTSGHWQKYKEDIFPLMAEDAEAAAIEQGFVLKPMNCPFHIQIYKGELRSY 313 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 R LP + +R E G + D +TPE + + + L +F Sbjct: 314 RELPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDNEFLSVVDLILTVF 373 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 L LK+ R D + + D + + Sbjct: 374 RSLQLKNFKARLS--------------FRDPASDKYIGGDEVWDKSEGAIRRAVQQLGMD 419 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + A Y D D+L ++ ++ + Sbjct: 420 HFEGIGEAAFYGPKLDFI---FSDALDREWQLGTVQVDYNLP--------ERFDLEYVAE 468 Query: 306 DG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 DG + V + G++ + ++ + +P +AP +I L+ + + D Sbjct: 469 DGARKRPVMIHRAPFGSLERLIGILI---EEYAGDFPLWLAPVQIRLLPVG---EAQIDF 522 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +++ A++ +G D GE++G A+ P+ +VG K V + + I+ R +G Sbjct: 523 TKEVVAKMLALGIRAEVDLSGERLGKLIRNAEKDKIPVMAVVGVKEVETNSLSIRTRASG 582 Query: 425 IREDMSLEEVINYASHRFSN 444 +S+++V+ +N Sbjct: 583 ELGVISVDQVVGKIQGAINN 602 >gi|296814972|ref|XP_002847823.1| threonyl-tRNA synthetase [Arthroderma otae CBS 113480] gi|238840848|gb|EEQ30510.1| threonyl-tRNA synthetase [Arthroderma otae CBS 113480] Length = 739 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 75/471 (15%), Positives = 136/471 (28%), Gaps = 65/471 (13%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + R+ + + L + S G LP G K + + ++R E + G E+ Sbjct: 295 MEEAEKRNHQKIGKEQELF--FFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRKRGYQEV 352 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P + +W +SG + Y +M +L D + P + +F +SYR LP Sbjct: 353 QSPNMYDVGIWRQSGHWAHYKDDMFKL-DVEKRDWALKPMNCPGHCIMFGHRERSYRELP 411 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 + R+E G+ R R+F D + F + + +F I+ Sbjct: 412 LRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTDNQIMEE-IEGLFDFLRAIYGLF 470 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 G ++ + P E A+ + D I Sbjct: 471 GFSF-KLKLSTRPEKYLGKLETWDYAEAQLREALTKFKGAD----------------WDI 513 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF------------------ 290 E A Y D+ + D+L + + ++ F Sbjct: 514 DEGDGAFYGPKIDI---TISDALKREHQCATIQLDYQLPLNFKLEYMTGETVPKSAAPAD 570 Query: 291 ------GTKYSLPMSATFKGA----DGKDHYVQMGSYGIGAM-RVVAAVIESSHDGKGII 339 S A G+ V + IG+ R +IE Sbjct: 571 PQAEAKPEDDSKRAQAPTADPAAPGPGRARPVVIHRAIIGSFERFFGILIEHFGGKWPFW 630 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 + D E++ L +V D G + + L Sbjct: 631 LSPRQILIVPVM-------ASANDYVEELQEILRGDKLNVDIDLSGHTMQKKIRNGQLAQ 683 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIRED----MSLEEVINYASHRFSNNR 446 + +VG++ V I++R + + LEE R Sbjct: 684 YNFIFVVGAQEKESRSVNIRNRDDPSSQTKGSLVPLEEARAKLRALRKERR 734 >gi|295698321|ref|YP_003602976.1| threonyl-tRNA synthetase [Candidatus Riesia pediculicola USDA] gi|291157332|gb|ADD79777.1| threonyl-tRNA synthetase [Candidatus Riesia pediculicola USDA] Length = 414 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 80/446 (17%), Positives = 153/446 (34%), Gaps = 48/446 (10%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + S +E +D +L L Q+S G W P G + IR + Sbjct: 7 KFSN---HTEKE--QDHRSIGRQLELF--YFDQNSPGSVFWNPNGLIIFQELKRYIRLKL 59 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 E+ P + LW ++G +Y K M +++ + + P + IF+ Sbjct: 60 KEYQYQEVKTPEILHKSLWKKTGHLQNYEKYMFKVSSES-RKYCLKPMNCPGHIKIFQQK 118 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SYR+LP + R+EL G+MR REF DA+ F + + K Sbjct: 119 IRSYRDLPLRIAEFGNCHRNELSGSLHGLMRVREFTQDDAHIFCTKEQVFEE-IKKCIGM 177 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 ++ G K I +R + P ++ A++ ++ + E Sbjct: 178 VQEVYKTFGFKKISIRLATRPKQRIGEEKYWDYAES----------ILEKALEKE----- 222 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++ + A Y + L D L + ++ G Sbjct: 223 -----FDLLPENGAFYGPKIEF---TLHDRLEREWQCGTIQLDFLLPIQLG--------V 266 Query: 301 TFKGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + K + + +G++ ++ + G W + + + + Sbjct: 267 FYIDQKNKKQHPMIIHRAILGSIERFIGILIEHYSGYLPTW------LSPIQVVVISVSK 320 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + +KI R+ G V+ D E+I + + P V+ G K V I+ Sbjct: 321 KYINFSKKIVQRIKYAGIRVYHDLKNEKINLKIRKHSINKIPYIVLCGEKEEKTGSVSIR 380 Query: 420 HRLTGIREDMSLEEVINYASHRFSNN 445 +L + + +S+E I S +N Sbjct: 381 RKLEKVIKTISIENFIKMVSSEINNY 406 >gi|62897187|dbj|BAD96534.1| threonyl-tRNA synthetase-like 1 variant [Homo sapiens] Length = 718 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 84/457 (18%), Positives = 143/457 (31%), Gaps = 57/457 (12%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + RD + L H+ S G +LP G + + + A IR E G E+ Sbjct: 294 REEAELRDHRRIGKEQELF--FFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEV 351 Query: 70 SVPTLQSADLWVESGRYDSYGKEML----------------RLADRNDKAMIYGPTHEEV 113 PTL S LW +SG ++ Y ++M + P + Sbjct: 352 KTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPA 411 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 +F +S+R LP R E G+ R R F DA+ F T + Sbjct: 412 HCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAE 471 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 ++ LG + P G D Sbjct: 472 -IQSCLDFLRSVYAVLGFSFRLA-LSTRPSGF-----------------LGDPCLWDQAE 512 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y DVH L D+L + ++ F Sbjct: 513 QVLKQALKEFGEPWDLNSGDGAFYGPKIDVH---LHDALGRPHQCGTIQLD----FQLPL 565 Query: 293 KYSLPMSATFKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 ++ +KG G + +G++ + V+ + G WP ++PF++ + Sbjct: 566 RFD----LQYKGQAGALGRPVLIHRAVLGSVERLLGVLA---ESCGGKWPLWLSPFQVVV 618 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKF 410 I + + + + ++ L G D D G + + A L + Q +VG K Sbjct: 619 IPVGSEQE---EYAKEAQQSLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQFVVGQKE 675 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 S V I+ R + L E + + P Sbjct: 676 QSKRTVNIRTRDNRRLGEWDLPEAVQRLVELQNTRVP 712 >gi|78776267|ref|YP_392582.1| threonyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251] gi|78496807|gb|ABB43347.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251] Length = 602 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 66/444 (14%), Positives = 151/444 (34%), Gaps = 40/444 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 Y + + RD ++ + T + G WLP G + + +++ + Sbjct: 194 LKSYLDMMAEAEKRDHRKLGAEMKMFT-FREEVGAGFPIWLPAGGRLRARLESLLFKAHR 252 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G + P + +DLW SG Y +YG+ M + ++ P + I+ + Sbjct: 253 KRGYEPVRGPEMLRSDLWKTSGHYQNYGENM-YFTNIDEIEFGVKPMNCVGHIKIYEEDL 311 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+LP +++ + R E+ G+ R REF DA+ F + + ++ Sbjct: 312 HSYRDLPLKYFEYGVVHRHEMTGALHGLFRVREFTQDDAHIFCRADQI-EEQIIEVVDFV 370 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +I + T + + + D Sbjct: 371 DKIMSTFEFNYKM------------------MLSTKPAKAVGDDSVWEVSTQALKNAMDK 412 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + I E A Y D+ K+ D++ + ++ F +++ Sbjct: 413 NGLVYEIDEGGGAFYGPKIDI---KITDAIGREWQCGTIQLD----FNLPSRF----ELE 461 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G + + +G+ ++ + + + + I Sbjct: 462 YNGENNDKIQPVMIHRAILGSFERFIGILTEHY------AGEFPMFIAPTQVAIVPIAPT 515 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D +++ +L +G D + + + A+ P+ V++G + V+ V I+ Sbjct: 516 HNDYAKELSDKLMDLGADSEIYSKNDSLNKRVRTAEKTRVPMLVVIGDEEVASRTVAIRD 575 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R T + ++S E ++ + + Sbjct: 576 RRTREQYNLSESEFLSLIQTKINE 599 >gi|152967010|ref|YP_001362794.1| threonyl-tRNA synthetase [Kineococcus radiotolerans SRS30216] gi|151361527|gb|ABS04530.1| threonyl-tRNA synthetase [Kineococcus radiotolerans SRS30216] Length = 656 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 64/422 (15%), Positives = 125/422 (29%), Gaps = 36/422 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + G+ + P G + +R G + Sbjct: 252 EAERRDHRRLGAELDLFS-FPDEIGSGLVVFHPKGGVVKREMEDYVRRRHIEEGFSYVGT 310 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + L+ SG Y M + + + + IFRS +SYR LP Sbjct: 311 PHISKGGLFETSGHLPYYEDTMFPGMELENSKYYLKAMNCPMHNLIFRSRGRSYRELPLR 370 Query: 132 FYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 F++ +R E G+ R R D++S+ + + L + GL Sbjct: 371 FFEFGSVYRYEKSGVVHGLTRVRGLTQDDSHSYVTQEQAPGE-IKHLLDFVLGLLKDFGL 429 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + + S + T + Sbjct: 430 DDYYLELSTRGDSEKF---------------IGSDEEWARATEVLETAARETGLDLVADP 474 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y + + D++ ++S + F + ADG Sbjct: 475 GGAAFYGPKI---SVQAKDAIGRTWQMSTIQYDFNQPARF--------ELEYTAADGTKQ 523 Query: 311 YV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + S G++ V+ + +P +AP ++ I + + + Sbjct: 524 RPVMIHSAKFGSLERFFGVLV---EHYAGAFPPWLAPVQVVGIPVA---DAHVPHLQDVA 577 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 A L G V DD +++ + P +I G++ V + V + R + Sbjct: 578 AALRAAGVRVEVDDTDDRMPKKIRTWTKQKIPFLLIAGAEDVENGAVSFRFRDGSQENGV 637 Query: 430 SL 431 + Sbjct: 638 PV 639 >gi|308805643|ref|XP_003080133.1| putative threonyl-tRNA synthetase (ISS) [Ostreococcus tauri] gi|116058593|emb|CAL54300.1| putative threonyl-tRNA synthetase (ISS) [Ostreococcus tauri] Length = 625 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 66/438 (15%), Positives = 146/438 (33%), Gaps = 39/438 (8%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + +E R D L L + G+ W P G + + ++ Sbjct: 214 KAYTEFKEEAKRRDHRTIGKDLNLFSLQQDSAGGGLVFWHPKGAQMRHMIETYWKDLHLA 273 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + +LW SG D Y + M + ++ P + +++ Sbjct: 274 RGYELLYSPHVARQELWQTSGHSDFYSENMYQPIKVEEEMYQLKPMNCPFHIVVYQDGYY 333 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP + ++ +R E G+ R R F DA+ F L + + ++ Sbjct: 334 SYKDLPIRWAELGTVYRYERSGTMHGLFRVRGFTQDDAHIFCLPDQITSE-IKRVLDLTE 392 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 I G + + P + + Sbjct: 393 EILSTFGFTDFEVNLSTRPEKS-----------------VGEDAIWTTAENALRDALGEK 435 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + + A Y D+ K+ D++ + S ++ F ++ + Sbjct: 436 GWDYIVDDGGGAFYGPKIDI---KILDAIGRKWQCSTVQLD----FNLPERFD----LNY 484 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 D + G++ ++ + +P +AP ++ L+ + Sbjct: 485 IDRDNNKQRPIMIHRAIFGSLERFFGILT---ENYAGEFPLWLAPVQVRLLPVT---DEV 538 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D E + A+L + GC V G+++ A+ P+ +VG +++ + ++ Sbjct: 539 SDYTEGVAAKLREAGCRVEI-CTGQRLAKLVRTAEKAKIPVMAVVGRDEAANNTLAVRTY 597 Query: 422 LTGIREDMSLEEVINYAS 439 G +S++EV++ + Sbjct: 598 KDGDVGSLSVDEVLSRIT 615 >gi|332024431|gb|EGI64629.1| Putative prolyl-tRNA synthetase, mitochondrial [Acromyrmex echinatior] Length = 437 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 133/436 (30%), Positives = 205/436 (47%), Gaps = 43/436 (9%) Query: 14 NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPT 73 D SHKLM+ G+I S G+Y+ LPLG + L+ + I+ +E GA ++ +P Sbjct: 27 EKTDITSKSHKLMINYGIIKPLSIGMYALLPLGMRILNKLIDIVDKEMMNIGAQKILLPA 86 Query: 74 LQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR---NLPF 130 L A LW ++ RYDS E+ L DR+ K I PTHEE + D+ + LP Sbjct: 87 LTPAALWKKTDRYDSNKTELFTLTDRHKKEYILSPTHEEAICDLISLAGPTVPISKLLPL 146 Query: 131 TFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 YQI K+RDE++PR G +RSREF+MKD Y+FD + + ++H+Y+ + SY IF ++G+ Sbjct: 147 KLYQISSKWRDEMKPRLGFLRSREFIMKDLYTFDSSLDNARHTYDLVCESYNNIFRQIGI 206 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 K + G IGG +SHE+ ++D GE + Sbjct: 207 KYTKSIGDVGTIGGLMSHEYHYVSDIGEDTIL---------------------------- 238 Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 P S + S PE K S EVGH F TKYS P+ F K Sbjct: 239 --QCPSCHFSINQSISKTTSCPECKNELHSYTAAEVGHTFLLDTKYSRPLEVMFFMEQNK 296 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA--HDQVCRDACE 366 + MG +G+G R++ V+E + WP +AP+ + +I KA ++ E Sbjct: 297 PTPMVMGCFGLGLSRIITLVVEILSINDEMRWPVKLAPYTVCIIPPKAGSKEESTSAYIE 356 Query: 367 KIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKV---EIKHRL 422 +++ K D DD IG + A LLG+P +++G + + EI Sbjct: 357 QLFEIFYKRNIDTILDDRTHYTIGKRLVFARLLGYPYIIVIGK--AATQSIPLFEIHDVN 414 Query: 423 TGIREDMSLEEVINYA 438 ++SL+++ +Y Sbjct: 415 NSTYHELSLDQMNDYF 430 >gi|291516871|emb|CBK70487.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Bifidobacterium longum subsp. longum F8] Length = 677 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 59/461 (12%), Positives = 128/461 (27%), Gaps = 54/461 (11%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L+E RD ++ L + + G+ + P G ++ + RE + Sbjct: 242 KAYQTRLEEAAKRDHRKLGAEMDLFS-FPDEIGPGLAVFHPKGAAVINAMEDYSREMHCK 300 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHE 111 + P + L+ SG Y M + P + Sbjct: 301 HHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEKDADGNITKPGADYYLKPMNC 360 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 361 PMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMK 420 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L + GL + + + S + + Sbjct: 421 DEL-TSLLTFVLNLLKDFGLTDFYLELST----------------KDPNKYVGSDEIWEE 463 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + A Y + + D++ +VS ++ F Sbjct: 464 ATNTLAEVAKESNLELVDDPCGAAFYGPKI---SVQARDAIGRTWQVSTIQLD----FNL 516 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 ++ + DG + R + IE + + + Sbjct: 517 PERF----QLEYIAKDGT------HQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAP 566 Query: 351 LINIKAHDQVCRDACEKIY---ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 + + V + + L D ++ G + A P +IVG Sbjct: 567 VQVLGV--PVADEFAPHLAGFVKSLEDEMVRCEIDYSDDRFGKKIRNASKSKVPFILIVG 624 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 + ++++ V + R + ++ V Sbjct: 625 EEDMNNNAVSFRFRDGSQLNGVPVDTAREQILTVIKKRVQV 665 >gi|227432324|ref|ZP_03914317.1| prolyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351930|gb|EEJ42163.1| prolyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 572 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L++ P +AE+ SH+L+L+ G I + G++S+LPL ++ L+ + IIREE Sbjct: 1 MKQSKLLMPTLRDIPAEAEVKSHQLLLKAGYIRPIAAGMFSYLPLAKRVLNKIETIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ A EM VP + A+LW SGRY++YG + + +R D+ I GPTHEE T + Sbjct: 61 MDKIDANEMLVPEVLPAELWQRSGRYETYGPALYKFKNRQDRDFILGPTHEETFTQLIAD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP T YQIQ KFRDE RPRFG++R+REF+MKDAYSF EG +++ M + Sbjct: 121 EIKSYKKLPLTVYQIQAKFRDENRPRFGLLRTREFIMKDAYSFSADQEGLDEAFHNMEEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF RLGL+ + ++G +GG S EF A GE + S D+ E Sbjct: 181 YTNIFDRLGLEYRAIVGDAGAMGGSDSKEFSAPAAAGEDTIAYSD-ATDYAANLE 234 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 60/158 (37%), Positives = 89/158 (56%), Gaps = 1/158 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 + K GIE+GHIF GT+YS + A +G+ V MGSYGIG R+++A+ E Sbjct: 398 GKGKLQFTSGIEIGHIFKLGTRYSKTLGAQVLDNNGRQTDVIMGSYGIGVSRLLSAIAEQ 457 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 D G++WP SVAPF+I ++ I D+ E++ L G +V DD E+ G + Sbjct: 458 KADEDGLVWPASVAPFEIHIVPINMKDEDQARVAEQLETLLVAQGMEVLVDDRKERAGVK 517 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 FA ADL+G P+++ VG K + VE+K R + +M Sbjct: 518 FADADLIGLPIRITVGKK-ADEDVVEVKVRASNTNIEM 554 >gi|226366266|ref|YP_002784049.1| threonyl-tRNA synthetase [Rhodococcus opacus B4] gi|254783533|sp|C1B4B5|SYT_RHOOB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226244756|dbj|BAH55104.1| threonyl-tRNA synthetase [Rhodococcus opacus B4] Length = 685 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 62/444 (13%), Positives = 128/444 (28%), Gaps = 47/444 (10%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + G+ + P G + R+ G ++ Sbjct: 257 EAERRDHRKLGSELDLFS-FPDELGSGLPVFHPRGGIIRTEMEDYSRKRHVEEGYEFVNT 315 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDIFR 119 P + L+ SG D Y M + + P + + IFR Sbjct: 316 PHITKGHLYEVSGHLDWYRDGMFPAMHIDEELNEDGTVRKPGQDYYLKPMNCPMHNLIFR 375 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 S +SYR LP ++ +R E G+ R R DA+ + + Sbjct: 376 SRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTREQMRDEL-ATTL 434 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L + GL + + + + + Sbjct: 435 QFVLGLLKDYGLDDFYLELST----------------KNPDKFVGDDAVWEEATATLAEV 478 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + A Y + ++ D+L ++S ++ F ++ L Sbjct: 479 AESSGLNLVPDPGGAAFYGPKI---SVQVQDALGRTWQMSTIQLD----FNLPERFDLEY 531 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 +A+ K V + G++ V+ + G W V I + Sbjct: 532 TAS---DGTKKRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPVA------ 582 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + D + RL G D +++ + P ++ G++ V V Sbjct: 583 ETFADHLFDVVKRLKAAGVRAEVDASDDRMQKKIFNNTAQKVPFMLLAGARDVEAGAVSF 642 Query: 419 KHRLTGIREDMSLEEVINYASHRF 442 + R + +++ + + Sbjct: 643 RFRDGTQVNGVPVDDAVRIVTDWI 666 >gi|161507687|ref|YP_001577641.1| prolyl-tRNA synthetase [Lactobacillus helveticus DPC 4571] gi|172048310|sp|A8YVR3|SYP_LACH4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|160348676|gb|ABX27350.1| Prolyl-tRNA synthetase [Lactobacillus helveticus DPC 4571] Length = 565 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 106/265 (40%), Positives = 145/265 (54%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SHKLM+R G I Q + G+Y++LPLG + L II +E Sbjct: 1 MRQSKFFMPTLKEAPSDAVAESHKLMIRGGYIRQVTAGVYAYLPLGYRVLRKAEGIIEDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MEKINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLKDRHGRESLLGPTHEETFTEIIAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T + ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATRDQLDEQFDDQKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R G+ P+ A+SG +GG S EF A GE + ++ D Sbjct: 181 YKRIFKRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNEKGTYAANLEMAKSID 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 ++ T D + Sbjct: 241 TFKQEPEDAKELTKVATPGCDTIEK 265 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 97/192 (50%), Gaps = 2/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + NE D + IEVGHIF GT Y+ M A F +GK Sbjct: 375 DFKVDEFVDIRTANEGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTKTMGADFLDQNGKAK 434 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V MGSYGIG R+++A +E G+ WP +APF I ++ +K + + + EK+ Sbjct: 435 PVIMGSYGIGVTRMLSAAVEQHLTEHGVAWPKEIAPFAIHIVQMKMNKEDQTELAEKLEK 494 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + S+ DV +DD E+ G +FA ADL+G P+++ VG K +D VE+K ++S Sbjct: 495 KFSEK-YDVLYDDRKERAGVKFADADLVGAPIRITVGKK-AADGIVEVKRPTDDKATEIS 552 Query: 431 LEEVINYASHRF 442 ++E+ + + Sbjct: 553 IDELDKFVNQEL 564 >gi|145534943|ref|XP_001453210.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124420921|emb|CAK85813.1| unnamed protein product [Paramecium tetraurelia] Length = 609 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 152/442 (34%), Gaps = 48/442 (10%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 SK + ++ D + L ++ + G +LP G K + + +IR+E Sbjct: 212 SKLYQDYQKQMECDHRHIGKQNHLFV--FNKLAPGSAFFLPHGTKIYNKLVEMIRKEYRE 269 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L DLW +SG D Y + + +D M P + ++++ Sbjct: 270 RGYQEVITPQLFHKDLWKQSGHLDKYAENIYMT---HDHQMGLKPMNCPGHCLLYKTLQH 326 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY+ LP F + R+E+ G+ R R+F DA+ F + + Sbjct: 327 SYKELPIRFADFGVLHRNEVHGTLTGLTRVRKFTQDDAHIFCTIEQIQQE-IKNTLDFLS 385 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 +++ R G + + P + D D Sbjct: 386 KVYGRFGFT-WELTLSTRP-----------------DKYIGDLQIWDEAERQLRIALSD- 426 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + + A Y DV + + + + G I T+ Sbjct: 427 -TPYTENPGDGAFYGPKIDVLI----------RDHNQKQHQCGTI-QLDFNLPERFDLTY 474 Query: 303 KGADGKD-HYVQMGSYGIGAMRVVAAVIESSHD-GKGIIWPDSVAPFKISLINIKAHDQV 360 + K V + +G++ + A++ ++ +V Sbjct: 475 HHENDKFSRPVMIHRAILGSIERMMAILTEQYNGRWPFWLSPRQVLIIPV-------SEV 527 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + ++IY +L K+G +V +D + +G + ++L F + +G+K + V+++ Sbjct: 528 SKQYAKEIYDQLYKLGFEVELEDSEQTLGKRIRKGEMLHFNYILTLGAKEQESNTVDVRE 587 Query: 421 RLTGIR-EDMSLEEVINYASHR 441 R + + M L+E I Sbjct: 588 RGDNHKHQSMKLDEFITKIIQL 609 >gi|219681610|ref|YP_002467996.1| prolyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682167|ref|YP_002468551.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471296|ref|ZP_05635295.1| prolyl-tRNA synthetase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|254782890|sp|B8D937|SYP_BUCA5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782891|sp|B8D7E1|SYP_BUCAT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|219621900|gb|ACL30056.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624453|gb|ACL30608.1| prolyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086555|gb|ADP66636.1| prolyl-tRNA synthetase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087136|gb|ADP67216.1| prolyl-tRNA synthetase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087672|gb|ADP67751.1| prolyl-tRNA synthetase [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 572 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 114/292 (39%), Positives = 168/292 (57%), Gaps = 7/292 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M S+Y L ++ P DA+I SH+LM+R+GMI + S G+Y WLP G + L + II E Sbjct: 1 MLTSQYLLSTSKDIPYDAKIISHQLMIRSGMIRKTSSGLYVWLPTGMRVLKKIKNIITTE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+E+ +P +Q LW ESGR + YG+E+LR DR I GPT+EEV+T+ S Sbjct: 61 MEKINALEILMPIIQPEYLWKESGRLNLYGEELLRFLDRRKNQFILGPTNEEVVTNFIGS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP T YQIQ KFRDE+RPRFG++R+REF MKDAYSF + +++YNK + S Sbjct: 121 EIHSYKQLPLTVYQIQTKFRDEIRPRFGIIRTREFTMKDAYSFHINQSCLENTYNKFYDS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-----SKDFMDFPIPSE 235 Y+ IF ++ L ++A+SG +GG++SHEF + GE ++ M+ E Sbjct: 181 YINIFKKMNLNFCAVKADSGSMGGNISHEFQAFSQNGEDEIVFSNDKLYSSNMNMAESIE 240 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 DF + +++ T S + +EKL L + ++ I Sbjct: 241 TIDFFKKKYSSCLIKNKTN--TKKSIIMSEKLNTPLINQIQTFLIQTKINDI 290 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 93/193 (48%), Gaps = 3/193 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSARG--IEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P D+ D P IE+GHIF G KYS + + K +G + Sbjct: 380 PMPIFKDIRKVTKNDLSPNGSGYLNIKQSIEIGHIFQLGQKYSRKIQQSVKIKNGNLKNL 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R+ AAVIE HD GIIWPDS+APF++ ++ I D + +Y + Sbjct: 440 YMGCYGIGITRIAAAVIEQHHDKNGIIWPDSIAPFEVVILPINMKKDNKIKIIAHFLYKK 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 K G DV DD E+ G F DL+G P Q+I+ + ++ VE + R +++ Sbjct: 500 FKKTGIDVILDDRDERPGVMFNEVDLIGIPHQIIISKRSINYDNVEYRERKNKENILINI 559 Query: 432 EEVINYASHRFSN 444 +++ N+ + Sbjct: 560 KDIKNFIIQKLKK 572 >gi|33863527|ref|NP_895087.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313] gi|81834835|sp|Q7TUU4|SYP_PROMM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|33640976|emb|CAE21434.1| tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313] Length = 599 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 112/240 (46%), Positives = 150/240 (62%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P DAEIASH+L+LR G I + + GIY++LPL + L + +I++EE Sbjct: 1 MRVSRLMLVTLRDIPADAEIASHQLLLRGGYIRRVTSGIYAYLPLMWRVLRKITSIVQEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + TGA+E +P LQ A+LW SGR+ Y M L DR + + GPTHEEV+T + Sbjct: 61 MDATGALETLLPQLQPAELWRRSGRWQGYTAGEGLMFHLEDRQGRELGLGPTHEEVITSL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP T YQIQ KFRDE+RPRFG+MR REF+MKDAYSF +Y M Sbjct: 121 AGDLLRSYRQLPVTLYQIQSKFRDEIRPRFGLMRGREFIMKDAYSFHSCEADLAMTYRAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y RIF R GL+++ + A+SG IGG S EF+V AD GE + S D + E Sbjct: 181 DEAYQRIFSRCGLETVAVEADSGAIGGASSQEFMVTADAGEDLILISGDGH-YAANQEKA 239 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 58/190 (30%), Positives = 93/190 (48%), Gaps = 4/190 (2%) Query: 260 SDVHNEKLFDSLPENK---RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 D+ + D + RGIEVGHIF G KYS + A F G MG Sbjct: 407 VDLRKSQAGDRCIHDSSQILEERRGIEVGHIFQLGRKYSEALEACFTNDQGTQEPFWMGC 466 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R+ A +E HD G+ WP ++APF++ ++ D+V + E++Y+ L Sbjct: 467 YGIGISRLAQAAVEQHHDEAGMKWPLAIAPFEVIIVVANIQDEVQQKLAEQLYSELQAAD 526 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 + DD E+ G +F ADL+G P +V+VG + + +VE+ R + + +S ++ Sbjct: 527 IEALLDDRTERAGVKFKDADLIGIPWRVVVG-RDAAKGQVELIQRSSRKVQILSAKQAFT 585 Query: 437 YASHRFSNNR 446 + N+ Sbjct: 586 ALVKDIAANQ 595 >gi|323466334|gb|ADX70021.1| Proline-tRNA ligase [Lactobacillus helveticus H10] Length = 565 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 106/265 (40%), Positives = 145/265 (54%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SHKLM+R G I Q + G+Y++LPLG + L II +E Sbjct: 1 MRQSKFFMPTLKEAPSDAVAESHKLMIRGGYIRQVTAGVYAYLPLGYRVLRKAEGIIEDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MEKINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLKDRHGRESLLGPTHEETFTEIIAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T + ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATRDQLDEQFDDQKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R G+ P+ A+SG +GG S EF A GE + ++ D Sbjct: 181 YKRIFKRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNEKGTYAANLEMAKSID 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 ++ T D + Sbjct: 241 TFKQEPEDAKELTKVATPGCDTIEK 265 Score = 146 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 97/192 (50%), Gaps = 2/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + NE D + IEVGHIF GT Y+ M A F +GK Sbjct: 375 DFKVDEFVDIRTANEGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTKTMGADFLDQNGKAK 434 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V MGSYGIG R+++A +E G+ WP +APF I ++ +K + + + EK+ Sbjct: 435 PVIMGSYGIGVTRMLSAAVEQHLTEHGVAWPKEIAPFAIHIVQMKMNKEDQTELAEKLEK 494 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + S+ DV +DD E+ G +FA ADL+G P+++ VG K +D VE+K +MS Sbjct: 495 KFSEK-YDVLYDDRKERAGVKFADADLVGAPIRITVGKK-AADGIVEVKRPTDDKATEMS 552 Query: 431 LEEVINYASHRF 442 ++E+ + + Sbjct: 553 IDELDKFVNQEL 564 >gi|134098578|ref|YP_001104239.1| threonyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] gi|291008224|ref|ZP_06566197.1| threonyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] gi|133911201|emb|CAM01314.1| threonyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 674 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 61/448 (13%), Positives = 121/448 (27%), Gaps = 49/448 (10%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + G+ + P G + R + G + Sbjct: 247 EAERRDHRRLGSELDLFS-FPDEIGSGLPVFHPKGGIIRKEMEDYSRRRHEQAGYEFVYS 305 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDIFR 119 P + L+ SG Y M + + P + I+R Sbjct: 306 PHITKDALFKTSGHLSWYKDGMFPAMHLDEERDEDGEVRKPGQDYYLKPMNCPFHNLIYR 365 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 S +SYR LP ++ +R E G+ R R DA+ + + + Sbjct: 366 SRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTPEQLQDEL-KSLL 424 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L + GL + + E + + + Sbjct: 425 NFVLNLLRDFGLDDFYLELSTR----------------NEEKYVGDDESWRVATEALREA 468 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + A Y + + D+L ++S ++ F Sbjct: 469 AESSGLELVPDPGGAAFYGPKI---SVQAKDALGRTWQMSTIQVDYHLPDRF-------- 517 Query: 299 SATFKGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + +DG G++ V+ + G W V I + Sbjct: 518 ELEYTSSDGSRQRPIKIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPIA----- 572 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D +++ L G V D +++ + P ++ G K V V Sbjct: 573 -DEHLDHLDRVAKALRAKGIRVEVDASDDRMQKKIRNHTTQKVPFLLLAGGKDVEADAVS 631 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 + R + ++ + +H Sbjct: 632 FRFRDGTQINGVPVDTAVAALAHWVERR 659 >gi|163839404|ref|YP_001623809.1| prolyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209] gi|162952880|gb|ABY22395.1| prolyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209] Length = 619 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 105/274 (38%), Positives = 147/274 (53%), Gaps = 2/274 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DAEIASHKLM+R G I + + GIYSWLPLG + L V AIIREE Sbjct: 17 RLSTLFLRTLREDPVDAEIASHKLMVRAGYIRRAAPGIYSWLPLGLRVLGKVEAIIREEM 76 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G+ E+ P L + + + R+ YG + RL DR + PTHEE+ T + + Sbjct: 77 AAIGSQEVHFPALLPCEPYEATNRWTEYGDGIFRLKDRKGNDYLLAPTHEEMFTLLVKDL 136 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP + +QIQ K+RDE RPR G+MR REF+MKD+YSFD+ G SY +Y Sbjct: 137 YGSYKDLPVSLFQIQNKYRDEARPRAGLMRGREFIMKDSYSFDIDDAGLDISYEAHRAAY 196 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +IF RL L+ + ++A +G +GG S EF+ GE S + + +T Sbjct: 197 FKIFERLSLEVVAVKATAGAMGGSKSEEFLHPTPVGEDTYVRSAGGYAANVEAVSTVVPA 256 Query: 242 IISLNSIVEQWTA--PYAATSDVHNEKLFDSLPE 273 I + + P T + +P Sbjct: 257 DIDFADLADAMVHDTPNTPTIETLVAAANSMVPR 290 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 88/171 (51%), Gaps = 3/171 (1%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 ARGIE GH+F G KY+ +GK V MGSYG+G R VAA+ E Sbjct: 446 GSGPLEIARGIETGHVFQLGRKYAEIFDLKVLDQNGKQVVVTMGSYGVGVTRAVAAIAEG 505 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGS 390 ++D +G++WP +VAP + ++ + D + EK+ A L G DV DD G Sbjct: 506 NNDDRGLVWPIAVAPADVHVVAVG-RDSEVFETAEKLAADLEAAGLDVILDDRQKVSPGV 564 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 +F A+L+G P+ + VG + + D VE+K+R TG ++ + + + Sbjct: 565 KFGDAELIGVPMVLAVG-RGLVDGVVELKNRRTGEPNNVPVADTVAEVLAL 614 >gi|332686700|ref|YP_004456474.1| prolyl-tRNA synthetase [Melissococcus plutonius ATCC 35311] gi|332370709|dbj|BAK21665.1| prolyl-tRNA synthetase [Melissococcus plutonius ATCC 35311] Length = 574 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 104/235 (44%), Positives = 149/235 (63%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK F+P L+E P DAE+ SH+++LR G I Q + G+Y++LPL + ++N+ I+REE Sbjct: 1 MRQSKMFIPTLREIPNDAEVLSHQILLRGGYIRQIAAGVYAYLPLANRIIENLKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + AIEM +P + A+LW +SGRY +YG ++ RL DRN++ I GPTHEE ++ + Sbjct: 61 FEKIDAIEMLLPAILPAELWEKSGRYQTYGPDLYRLKDRNERQYILGPTHEETFVELIGN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ K+RDE RPRFG++R REF+MKD YSF T E +YN + Sbjct: 121 DVNSYKRLPLNLYQIQSKYRDEKRPRFGLLRGREFIMKDGYSFHATEESLDTTYNDYEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF R GL + + G +GG S EF+ ++D GE + C D+ E Sbjct: 181 YSAIFKRCGLVFRSIIGDGGAMGGKDSKEFMAISDIGEDTI-CFSTEGDYAANLE 234 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 73/230 (31%), Positives = 115/230 (50%), Gaps = 4/230 (1%) Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 E +++ + + +N E+ P + D+ + D P+ Sbjct: 339 PDEVKIYADLHIQNLANTITGANQTGYHLVNVNPERDFVPIS-YEDLRLVQEGDPSPDGN 397 Query: 276 RV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 V +GIE+GHIF GT+YS M+AT +GK+ Y+ MGSYGIG R+ AA+ E + Sbjct: 398 GVLSFTKGIEIGHIFKLGTRYSESMNATILDENGKEQYIIMGSYGIGVSRLFAAIAEQNA 457 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 D KG+ WP +APF I ++ + D E+I + G +V DD E+ G +FA Sbjct: 458 DDKGVNWPIGIAPFDIHVVQMNMKDDEQTQLSEEIEELMISAGYEVLVDDRNERAGVKFA 517 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 ADL+G P+++ VG K + D VEIK + TG ++ EE+ + + Sbjct: 518 EADLIGCPIRITVGKKAIDD-IVEIKIKRTGEMLEVKKEELKSTLAILLK 566 >gi|260101368|ref|ZP_05751605.1| proline-tRNA ligase [Lactobacillus helveticus DSM 20075] gi|260084820|gb|EEW68940.1| proline-tRNA ligase [Lactobacillus helveticus DSM 20075] gi|328465729|gb|EGF36933.1| prolyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463] Length = 565 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 106/265 (40%), Positives = 145/265 (54%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SHKLM+R G I Q + G+Y++LPLG + L II +E Sbjct: 1 MRQSKFFMPTLKEAPSDAVAESHKLMIRGGYIRQVTAGVYAYLPLGYRVLRKAEGIIEDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MEKINVPEMIMPHLLPATLWQESGRYKKYGAEMFKLKDRHGRESLLGPTHEETFTEIIAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T + ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATRDQLDEQFDDQKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R G+ P+ A+SG +GG S EF A GE + ++ D Sbjct: 181 YKRIFKRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNEKGTYAANLEMAKSID 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNE 265 ++ T D + Sbjct: 241 TFKQEPEDAKELTKVATPGCDTIEK 265 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 98/192 (51%), Gaps = 2/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + NE D + IEVGHIF GT Y+ M A F +GK Sbjct: 375 DFKVDEFVDIRTANEGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTKTMGADFLDQNGKAK 434 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V MGSYGIG R+++A +E G+ WP +APF I ++ +K + + + EK+ Sbjct: 435 PVIMGSYGIGVTRMLSAAVEQHLTEHGVAWPKEIAPFAIHIVQMKMNKEDQTELAEKLEK 494 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + S+ DV +DD E+ G +FA ADL+G P+++ VG K +D VE+K + +MS Sbjct: 495 KFSEK-YDVLYDDRKERAGVKFADADLVGAPIRITVGKK-AADGIVEVKRPIDDKATEMS 552 Query: 431 LEEVINYASHRF 442 ++E+ + + Sbjct: 553 IDELDKFVNQEL 564 >gi|217967413|ref|YP_002352919.1| threonyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724] gi|217336512|gb|ACK42305.1| threonyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724] Length = 638 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 72/438 (16%), Positives = 136/438 (31%), Gaps = 38/438 (8%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + RD +L + + G+ + P G + R+E + G + Sbjct: 231 REEAQRRDHRKLGRELEIFNTF-EEAGPGLIFYPPKGAMLRLIIEEFERKEHLKRGYFPV 289 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P L A+LW SG +D+Y + M L DK P + I+ S ++SYR+LP Sbjct: 290 ITPHLMQAELWKRSGHWDNYRENMFFLQ-VEDKDYAVKPMNCPGHILIYNSKVRSYRDLP 348 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 F+++ +R E +G+ R+R F DA+ F + + + Sbjct: 349 LRFFEMGTVYRYERSGVLYGLERARGFTQDDAHIFCTQEQLEDE-IKGVLDFVFYMLDSF 407 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 GL E++V T + S + + + + I Sbjct: 408 GL-----------------KEYVVTLSTKPEKYIGSDEIWEKATQALKNALESTGIEYRI 450 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 E A Y DV + L L + + ++ F ++ L A + Sbjct: 451 AEGEGAFYGPKIDVGLKGL---LGKMWQGPTIQVD----FNLPERFDLTYDA--PDGTKR 501 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + + R + ++E + + + E + Sbjct: 502 RPVMIHRAILGSYERFIGILVEHYGGRFPLWLAPEQVRILPI-------SERHNEYAEYV 554 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 L D ++ + A P IVG K ++KV ++ Sbjct: 555 LRNLRNNDIRAEIDKDQAKLNYKLRKAIAEKVPYIFIVGDKEKEENKVSVRVH-NKDLGM 613 Query: 429 MSLEEVINYASHRFSNNR 446 L V+ + + Sbjct: 614 FDLAYVVTKLLEEIRSKK 631 >gi|332251678|ref|XP_003274973.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic isoform 3 [Nomascus leucogenys] Length = 619 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 74/449 (16%), Positives = 148/449 (32%), Gaps = 44/449 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + + +E RD L H+ S G +LP G + + IR E Sbjct: 202 KMLKEWEKLQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNALIEFIRSE 259 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y M + P + +F Sbjct: 260 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSDNMFSFEVEKEL-FALKPMNCPGHCLMFDH 318 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 319 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 377 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E D Sbjct: 378 FLRTVYSIFGFSFKLN-LSTRPEKFLGDIE-----------------VWDQAEKQLENSL 419 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 420 NEFGEKWELNSGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 468 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 469 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 524 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ + D D G + + A L + ++VG K V Sbjct: 525 --TCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTV 582 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 I+ R + + ++ E I + Sbjct: 583 NIRTRDNKVHGERTISETIERLQQLKQSR 611 >gi|188526926|ref|YP_001909613.1| threonyl-tRNA synthetase [Helicobacter pylori Shi470] gi|238691884|sp|B2URV1|SYT_HELPS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|188143166|gb|ACD47583.1| threonyl-tRNA synthetase [Helicobacter pylori Shi470] Length = 612 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 77/441 (17%), Positives = 151/441 (34%), Gaps = 40/441 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + R+ +L L + + G+ WLP G + + ++ + G Sbjct: 207 YLFQIEEAKKRNHRKLGVELGLFS-FDDEIGAGLPLWLPKGARLRKRIEDLLSKALLLRG 265 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + +D+W SG YD+Y + M +++ P + +++S + SY Sbjct: 266 YEPVKGPEILKSDVWKISGHYDNYKENM-YFTTIDEQEYGIKPMNCVGHIKVYQSALHSY 324 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP FY+ + R E G++R REF DA+ F + L Sbjct: 325 RDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCS-----FEQIQSEVSAILDF 379 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + I + + T + + + + Sbjct: 380 --------------THKIMQAFDFSYEMELSTRPAKSIGDDKVWEKATNALKEALKEHRI 425 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D+L + +++ F Sbjct: 426 DYKIDEGGGAFYGPKIDI---KITDALKRKWQCGTIQVDMNLP--------ERFKLAFTN 474 Query: 305 ADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 + V + +G+ A++ G + VAP +I+LI I + Sbjct: 475 EHNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFF---VAPTQIALIPIN---EEHHV 528 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 K+ L K V D + + + +A+ P+ +++G++ V + I+ R Sbjct: 529 FALKLKEALKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREK 588 Query: 424 GIREDMSLEEVINYASHRFSN 444 + M L+E +N + Sbjct: 589 QAQYKMPLKEFLNMVESKMQE 609 >gi|119383706|ref|YP_914762.1| threonyl-tRNA synthetase [Paracoccus denitrificans PD1222] gi|166225473|sp|A1B0M2|SYT_PARDP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|119373473|gb|ABL69066.1| Ser-tRNA(Thr) hydrolase [Paracoccus denitrificans PD1222] Length = 648 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 148/445 (33%), Gaps = 45/445 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +L+E RD ++ L + + G+ W P G + A +R R Sbjct: 234 KAHLTMLEEAAKRDHRKLGREMELF--HFQEEAPGMVFWHPNGWSIYRELEAYMRRRLIR 291 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA-----DRNDKAMIYGPTHEEVMTDIF 118 E+ P + LW +SG +++Y + M + + + P + ++ Sbjct: 292 ADYKEIKTPQVVDRILWEKSGHWEAYRENMFIVEVDEEGAKEKRINALKPMNCPCHVQVY 351 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 +KSYR+LP + R E G+MR R F+ DA+ F T + + Sbjct: 352 NQGLKSYRDLPLRLAEFGSCHRYEPSGSMHGLMRVRGFVQDDAHIFC-TEDQIEAECAGF 410 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 ++ LG + ++ + P S E D + Sbjct: 411 IGLLSSVYKDLGFEKFDIKLSTRPDVRVGSDE-----------------IWDKAEAALKG 453 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + + + A Y D KL D++ + + F + Sbjct: 454 AIEHLDLPYEVNPGDGAFYGPKLDF---KLTDAIGREWQCGTFQCD----FNLPQR---- 502 Query: 298 MSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + A + G DG K V + +G+ ++ ++ GK +W S++ Sbjct: 503 LEAEYVGEDGAKHMPVMLHRAVLGSFERFIGILIENYSGKLPLWLAPRQVVVASIV---- 558 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D ++ A L G D E+I + + P+ + VG K V + V Sbjct: 559 --SGADDYVHEVVAALRAAGLRAEADTRNEKINYKVREHSVGKVPVIMAVGLKEVEERSV 616 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 I+ E LE I Sbjct: 617 SIRRLDRQGSESHGLESAIATLRAE 641 >gi|300863511|ref|ZP_07108463.1| threonyl-tRNA synthetase [Oscillatoria sp. PCC 6506] gi|300338467|emb|CBN53605.1| threonyl-tRNA synthetase [Oscillatoria sp. PCC 6506] Length = 608 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 152/444 (34%), Gaps = 40/444 (9%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + +E RD +L L G+ W P G + +++EQ + G Sbjct: 191 YQRRKEEALRRDHRKLGKELGLFI-FADVVGPGLPLWTPKGTILRSILEDFLKQEQVKRG 249 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA------MIYGPTHEEVMTDIFR 119 + + P + DL+ SG + Y ++M + ++++ + P + I++ Sbjct: 250 YLPVVTPHIGRVDLFKTSGHWQKYKEDMFPMMAEDEESAKAEQGFVLKPMNCPFHIQIYK 309 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 S ++SYR LP + +R E G + D +TPE + + Sbjct: 310 SELRSYRELPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDAEFLSVVD 369 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L +F L LK+ R D + S + + + Sbjct: 370 LILSVFKSLQLKNFKARLS--------------FRDPTSDKYMGSDEVWEQSQGAIRRAV 415 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + A Y D D+L ++ ++ Sbjct: 416 ETLGMNYFEGIGEAAFYGPKLDFI---FSDALDREWQLGTVQVDYNLP--------ERFD 464 Query: 300 ATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + DG + G++ + ++ + +P +AP ++ L+ + Sbjct: 465 LEYVAEDGTRKRPVMIHRAPFGSLERLIGILI---EEYAGDFPVWLAPIQVRLLPV---S 518 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 +++ A++ +G D E++G A+ P+ IVG+K V + + I Sbjct: 519 NDFLPFAQEVAAKMRILGIRAEADVSSERLGKLIRNAEKDKIPVMGIVGAKEVESNSLSI 578 Query: 419 KHRLTGIREDMSLEEVINYASHRF 442 + R +G ++++EVIN Sbjct: 579 RTRASGELGMIAVDEVINRLKSAI 602 >gi|27229277|ref|NP_149065.2| threonyl-tRNA synthetase, cytoplasmic [Mus musculus] gi|59896669|sp|Q9D0R2|SYTC_MOUSE RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|26373003|dbj|BAB27429.2| unnamed protein product [Mus musculus] gi|74177703|dbj|BAE38950.1| unnamed protein product [Mus musculus] gi|74195699|dbj|BAE39654.1| unnamed protein product [Mus musculus] gi|74223282|dbj|BAE40773.1| unnamed protein product [Mus musculus] gi|74225376|dbj|BAE31616.1| unnamed protein product [Mus musculus] gi|148671337|gb|EDL03284.1| threonyl-tRNA synthetase, isoform CRA_b [Mus musculus] Length = 722 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 74/449 (16%), Positives = 151/449 (33%), Gaps = 44/449 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 305 KLLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNTLMEFIRSE 362 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + + P + +F Sbjct: 363 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSF-EVEKEQFALKPMNCPGHCLMFDH 421 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 422 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 480 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E A+ Sbjct: 481 FLRTVYSVFGFSFKLN-LSTRPEKFLGDIEIWNQAEK-----------------QLENSL 522 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 523 NEFGEKWELNPGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 571 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 572 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 627 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ + D D G + + A L + ++VG K + V Sbjct: 628 --TCDEYAQKVRQQFHDAKFMADTDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTV 685 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 I+ R + + ++EE + Sbjct: 686 NIRTRDNKVHGERTVEETVRRLQQLKQTR 714 >gi|169617674|ref|XP_001802251.1| hypothetical protein SNOG_12019 [Phaeosphaeria nodorum SN15] gi|111059311|gb|EAT80431.1| hypothetical protein SNOG_12019 [Phaeosphaeria nodorum SN15] Length = 779 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 83/484 (17%), Positives = 150/484 (30%), Gaps = 69/484 (14%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + L L+E RD + L H+ S G +LP GQ + + A +REE Sbjct: 318 QAHLKFLEEAAKRDHRKIGKEQELF--FFHEASPGSPFFLPHGQIIFNTLQAFLREEYWN 375 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + S+ LW SG + Y ++M D + P + IF+ + Sbjct: 376 RGYQEVQSPNMYSSALWKVSGHWQHYHEDMFTF-DVEKEKWGLKPMNCPGHALIFKHRER 434 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP + R+E G+ R R F D + F + ++ + +F Sbjct: 435 SYRELPIRMADFGVLHRNEASGALTGLTRVRRFQQDDTHIFCTQDQITEEIF-GLFDFLR 493 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ + G ++ + P G E A+ + N + Sbjct: 494 AVYGKFGFTF-KLKLSTRPDGFLGEVETWNKAEAKL-------------TEALNQFTAEG 539 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTKYSLPMSA 300 + A Y D+ + D+L + + ++ F S +A Sbjct: 540 GGQWELNPGDGAFYGPKIDI---TISDALKREFQCATIQLDFQLPNQFELEYMTSEVAAA 596 Query: 301 TFKG----------------------------------ADGKDHYVQMGSYGIGAMRVVA 326 K G V + G+ Sbjct: 597 KPKEEKAKEEPAPKDAPAPVEQKKEAADPNAPKKIQPPQPGYARPVMIHRAIYGSFERFI 656 Query: 327 AVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE 386 A+I G+ W I ++ D +++ A L K D G Sbjct: 657 AIITEHFAGRWPFWLSPRQVMVIPVMP------SANDYVKEVQAVLRKNKFHADIDVSGN 710 Query: 387 QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR----EDMSLEEVINYASHRF 442 + + A L + ++VG++ V ++R E + L+E + Sbjct: 711 TMQKKIRTAQLSLYNFIMVVGAEEQKARAVNWRNRDDQATQQRGEIVPLDEAVEKLCKLR 770 Query: 443 SNNR 446 + Sbjct: 771 DERK 774 >gi|58337540|ref|YP_194125.1| prolyl-tRNA synthetase [Lactobacillus acidophilus NCFM] gi|227904181|ref|ZP_04021986.1| prolyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796] gi|81311450|sp|Q5FJN0|SYP_LACAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|58254857|gb|AAV43094.1| prolyl-tRNA synthetase [Lactobacillus acidophilus NCFM] gi|227868200|gb|EEJ75621.1| prolyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796] Length = 565 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 107/261 (40%), Positives = 145/261 (55%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+SK+F+P L+E P DA SHKLM+R G I Q + G+Y++LPLG + L +II +E Sbjct: 1 MRQSKFFMPTLKEAPSDAVAESHKLMIRGGYIRQVTAGVYAYLPLGYRVLRKAESIIEQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MDNINVPEMMMPHLLPATLWQESGRYQKYGAEMFKLKDRHGRESLLGPTHEETFTEIIAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDQQFDDQKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R G+ P+ A+SG +GG S EF A GE + ++ D Sbjct: 181 YKRIFKRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNEKGTYAANLEMAKSID 240 Query: 241 DIISLNSIVEQWTAPYAATSD 261 ++ T D Sbjct: 241 TFKQEPEEAKELTKVATPACD 261 Score = 146 bits (368), Expect = 7e-33, Method: Composition-based stats. Identities = 64/192 (33%), Positives = 101/192 (52%), Gaps = 2/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A NE D + IEVGHIF GT Y+ M A F +GK Sbjct: 375 DFKVDEFADIRTANEGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTKTMGADFLDQNGKAQ 434 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V MGSYGIG R+++AV+E +G+ WP +APF+I ++ +K + + + EK+ Sbjct: 435 PVIMGSYGIGVTRMLSAVVEQHLTDRGVAWPKEIAPFEIHIVQMKMNKEDQTELAEKLEK 494 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + S+ DV +DD E+ G +FA ADL+G P+++ +G K +D VE+K +MS Sbjct: 495 KFSEK-YDVLYDDRKERAGVKFADADLVGAPVRITIGKK-AADGIVEVKRPTDEKAVEMS 552 Query: 431 LEEVINYASHRF 442 ++E+ + + Sbjct: 553 IDELDKFVNQEL 564 >gi|41408814|ref|NP_961650.1| threonyl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis K-10] gi|73919807|sp|Q73WE4|SYT_MYCPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|41397173|gb|AAS05033.1| ThrS [Mycobacterium avium subsp. paratuberculosis K-10] Length = 684 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 68/452 (15%), Positives = 141/452 (31%), Gaps = 48/452 (10%) Query: 8 LPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +++E R D +L L + + G+ + P G + R + G Sbjct: 251 LRLIEEAQRRDHRKLGSELDLFS-FPDEIGSGLAVFHPRGGVVRRELEEYSRRKHIEAGY 309 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVM 114 ++ P + A L+ SG D Y M + + P + + Sbjct: 310 EFVNTPHITKAQLFHTSGHLDWYADGMFPPMHLDAEYDDDGTVRKPGQDYYLKPMNCPMH 369 Query: 115 TDIFRSHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHS 173 T I+RS +SYR LP ++ +R E G+ R+R F M D++ F + Sbjct: 370 TLIYRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTMDDSHIFCTREQLHGEL 429 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 + L + GL + + + S + + Sbjct: 430 -ASLLRFVLELLGDYGLTDFYLELST----------------KDPDKFVGSDEVWEQATT 472 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 S + A Y + + D+L + ++S ++ F F + Sbjct: 473 SLADVAAESGLELVPDPGGAAFYGPKI---SVQARDALGRSWQMSTIQVD----FNFPER 525 Query: 294 YSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 + L +A+ + V + G++ ++ + G W V I + Sbjct: 526 FELEYTAS---DGTRQRPVMIHRALFGSIERFFGILTEHYAGAFPAWLAPVQAVGIPVA- 581 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 E + A+L G V D +++ + P ++ G + V+ Sbjct: 582 -----DEHVPYLESVAAQLKSYGVRVEVDASDDRMAKKIVHHTAQKVPFMLLAGDRDVAA 636 Query: 414 SKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + + + ++ ++ Sbjct: 637 GAVSFRFGDRTQINGVPRDSAVDAIVKWIADR 668 >gi|183602502|ref|ZP_02963867.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis HN019] gi|219683545|ref|YP_002469928.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis AD011] gi|254782886|sp|B8DTM3|SYP_BIFA0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|183218143|gb|EDT88789.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis HN019] gi|219621195|gb|ACL29352.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis AD011] Length = 599 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 102/283 (36%), Positives = 153/283 (54%), Gaps = 2/283 (0%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S FL L+E+P DA++ S KL+ R G I + + GI++WLPLG L+ + +IREE N Sbjct: 1 MSTLFLRTLREDPADADVDSAKLLQRAGYIRKAAPGIWTWLPLGLAVLNKIEDVIREEIN 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+ P L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 61 GIGAQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDMY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG + +Y +Y Sbjct: 121 SSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTVDEEGMRQAYMDERGAYE 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RIF RL LK +P+ A SGP+GG S EF+ GE + + + + +T + Sbjct: 181 RIFQRLDLKYVPVFAMSGPMGGSASEEFLAPMPIGEDTFALAPSGKAWNVEALHTPAVEA 240 Query: 243 ISLNSIVE--QWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 + + + + P A T D P + + Sbjct: 241 VDCSQTPDATKRATPNARTIDEMIAFANAEYPREDGRDWQASD 283 Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 2/172 (1%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 RG+E+G +F G KYS + +GK V MG YGIG RV+A + E+ Sbjct: 424 GSGPLSFERGVEIGQVFQLGLKYSEALDLKVLNQNGKTVPVWMGCYGIGVSRVLACIAET 483 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGS 390 HD KG+ WP ++AP ++ ++ D+ +A E++ LS G +V +DD G Sbjct: 484 HHDDKGLAWPMNIAPAQVHVMATG-KDEAAFEAAERLVDELSANGIEVLYDDRRKVSPGV 542 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 +F A+L+G P+ + G V++ +E++ R E++S++ V R Sbjct: 543 KFKDAELIGVPIIAVAGRDTVNNGTIEVRDRDGSNSENISVDSVAQVIVDRV 594 >gi|187921760|ref|YP_001890792.1| threonyl-tRNA synthetase [Burkholderia phytofirmans PsJN] gi|187720198|gb|ACD21421.1| threonyl-tRNA synthetase [Burkholderia phytofirmans PsJN] Length = 404 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 80/427 (18%), Positives = 144/427 (33%), Gaps = 41/427 (9%) Query: 17 DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS 76 D + +KL L + G+ W P G + + +R R G E+ P L + Sbjct: 5 DHRVIGNKLDLF--HQQEEGVGMVFWHPRGWELYRVLEVYVRARMRRAGFREIRTPQLLA 62 Query: 77 ADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 LW +SG ++ +G M LAD +A+ P +F ++SYR LP + + Sbjct: 63 RSLWEKSGHWEKFGAAMYSLADAEEGRALCLKPMSCPCHVQVFNQRVRSYRELPVRYSEF 122 Query: 136 QLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIP 194 RDE G+ R+R F+ DA+ F T + + ++ LG Sbjct: 123 GACHRDEPSGSLEGLKRTRAFVQDDAHVFC-TEAQIEVEVGRFCALLRTVYADLGFPRFK 181 Query: 195 MRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTA 254 + + P D + ++E A Sbjct: 182 VALATRPAMR-----------------AGDDQTWDRAEDALANAARAAGLEFEVLEGEGA 224 Query: 255 PYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV-Q 313 Y + H L DS + + ++ F + + A F + Sbjct: 225 FYGPKLEFH---LLDSRARSWQCGTIQLD----FVLPER----LDAEFVNERNERERPVM 273 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 + +G+M A++ H+G +W + + + R +++ L Sbjct: 274 IHHAVLGSMERFIAMLLEHHEGWLPVW------LAPEQVVVATISETNRAYAQEVMQALD 327 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G D E++ + A PL V+VGS+ D + I+ R G + +S E Sbjct: 328 DAGVRAVLDSRPERLEKKIVDAREKQVPLLVVVGSRDERDQTISIRLRD-GRQMTVSFVE 386 Query: 434 VINYASH 440 + Sbjct: 387 AVERLRS 393 >gi|227513178|ref|ZP_03943227.1| prolyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577] gi|227083559|gb|EEI18871.1| prolyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577] Length = 569 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 108/272 (39%), Positives = 156/272 (57%), Gaps = 1/272 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P+ AE SHK+++R G I Q S G+Y++LPL + L + I+R+E Sbjct: 1 MKQSKILVPTLKETPKGAEALSHKMLVRAGYIKQISAGMYAYLPLAYRVLTKIETIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +T A EM +P + A+LW ESGRY++YG E+ + +R+D I GPTHEE T++ R Sbjct: 61 MEKTSAHEMLMPDVLPAELWKESGRYETYGPELFKFKNRHDTDFILGPTHEETFTELIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPR+G++RSREF+MKDAYSF +Y M + Sbjct: 121 SIKSYKQLPLVLYQIQNKYRDEDRPRYGLLRSREFIMKDAYSFAANEADLDDAYCAMEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R+GLK + + G +GG S EF +A GE + S D+ E Sbjct: 181 YRTIFDRIGLKYRVIIGDGGAMGGSDSKEFSAMAAVGEDTIVYSD-ESDYFANLEMAKSK 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 ++ E A + +++ D L Sbjct: 240 VTDEPSTEAEADLKKVATPNVKSIDEVADFLG 271 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 68/189 (35%), Positives = 104/189 (55%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 A D K + P+ K RGIE+GHIF GT+YS ++A +G+ V MG Sbjct: 380 AVDDFVVVKEGELSPDGKGKLKFTRGIEIGHIFKLGTRYSKSLNANVLDENGRSIPVIMG 439 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+++A+ E + D G++WP +VAP+ + +I I +V + +I +L++ Sbjct: 440 SYGIGISRLLSAISEQNADENGLVWPVAVAPYTVHVIPINVKKEVQMNLANQIEEQLTEN 499 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G +FA +DLLG PL++ VG K + VEIK R G + +EE+ Sbjct: 500 GIEVLVDDRRERPGVKFADSDLLGIPLRITVGKK-ADEGIVEIKIRKNGETVESKVEELS 558 Query: 436 NYASHRFSN 444 + N Sbjct: 559 DTVKILLKN 567 >gi|152992232|ref|YP_001357953.1| prolyl-tRNA synthetase [Sulfurovum sp. NBC37-1] gi|166980164|sp|A6Q7Y7|SYP_SULNB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|151424093|dbj|BAF71596.1| prolyl-tRNA synthetase [Sulfurovum sp. NBC37-1] Length = 568 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 114/268 (42%), Positives = 157/268 (58%), Gaps = 2/268 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIRE 59 MR S+ +P +E P DA +ASH ++R G I G+Y++LPLG+K LD V +++E Sbjct: 1 MRFSRLLIPTTKETPNDATLASHIYLIRGGFIQSVGGSGLYNFLPLGKKVLDRVRNVVKE 60 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 E ++ G E+S+ + A LW ESGRY+ YGKE+LR DR + + GPTHEE+M ++ R Sbjct: 61 ELDKAGCQEVSLSFVTPASLWEESGRYEKYGKELLRFKDRKNNEFVLGPTHEEMMVNLVR 120 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSY+ LP YQI LKFRDE+RPRFG+MR REFLMKD YSF + E K ++ M Sbjct: 121 QSVKSYKQLPLNLYQINLKFRDEIRPRFGLMRGREFLMKDGYSFHTSEEDMKREFDLMEE 180 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 +Y +IF RLGL+ + A+SG IGG S EF+VLAD+GE + + D+ E Sbjct: 181 TYKKIFTRLGLEFRVVEADSGAIGGSGSKEFMVLADSGEDTIVVCDNC-DYGANIEAAVR 239 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKL 267 + E E L Sbjct: 240 QEKDCEAKAPEAEAGKVHTPDTTTIESL 267 Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 67/193 (34%), Positives = 102/193 (52%), Gaps = 3/193 (1%) Query: 252 WTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 + D+ + D P+ +GIE GHIF GT+YS P+ ATF +GK Sbjct: 377 FEGMEGDYHDLVAVQEGDLCPKCGAPMRYTKGIEAGHIFQLGTQYSEPLGATFLDENGKA 436 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + MG+YGIG R++AA+IE +HD +G IW APF + LI D+ EK+Y Sbjct: 437 QPMVMGTYGIGVSRLLAAIIEQNHDDRGCIWTKESAPFDLQLIVSNIKDETQVALGEKLY 496 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 L+ G DV +DD ++ G++ +LLG P V++G K + D VE R ++E++ Sbjct: 497 EALTAKGLDVLFDDRKDRFGAKMKDYELLGIPYAVVIGKK-LQDGLVEFISREGLVKEEV 555 Query: 430 SLEEVINYASHRF 442 S E +++ R Sbjct: 556 SAEAILDVVGERV 568 >gi|302829308|ref|XP_002946221.1| hypothetical protein VOLCADRAFT_102823 [Volvox carteri f. nagariensis] gi|300269036|gb|EFJ53216.1| hypothetical protein VOLCADRAFT_102823 [Volvox carteri f. nagariensis] Length = 691 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 70/445 (15%), Positives = 142/445 (31%), Gaps = 58/445 (13%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +Y I + RD + + L H S G +LP G + + + + IRE+ Sbjct: 279 LKEYQHRIEEAKKRDHRVLGVQQELF--FFHPLSPGSCFFLPHGARIYNTLMSFIREKYW 336 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + + DLW SG D Y + M + P + +F + Sbjct: 337 KYEYEEVITPNIYNFDLWRTSGHADHYRENMF-AFEIEKAEYGLKPMNCPGHCLMFANRT 395 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR LP + R+E G+ R + F+ Sbjct: 396 RSYRELPLRLADFGVLHRNEFSGALQGLTRVMSEVQ-------------------GFLKL 436 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L + + M + P G E A+T + + Sbjct: 437 LGEVYDVFGLDYTMALSTRPEGYLGDIELWNRAET-----------------ALTEALNS 479 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y D+ ++D+L + + ++ F ++ Sbjct: 480 TGREWVLNPGDGAFYGPKIDI---TVYDALRRKFQCATVQLD----FQLPIRF----GLE 528 Query: 302 FKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G + V + +G++ + A++ + WP + P ++ ++ I + Sbjct: 529 YASESGTLERPVIVHRAVLGSVERMFAILT---EHFAGKWPFWLNPRQVMVVPI---SEN 582 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + L G V D ++ + A L + ++VG ++ V ++ Sbjct: 583 SSQYAFDVRRELRAAGLHVDVDASDRKMQKKVREAQLAQYNYILVVGEAEKAEQTVNVRT 642 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R + LE+V + Sbjct: 643 RDNVVHGMFKLEDVRTLMVEERDSR 667 >gi|118475741|ref|YP_892822.1| threonyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40] gi|118414967|gb|ABK83387.1| threonyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40] Length = 617 Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats. Identities = 69/437 (15%), Positives = 146/437 (33%), Gaps = 40/437 (9%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 I + RD + M G+ WLP G + + + G + Sbjct: 216 IEEAKKRDHRKLGAE-MKFFTFDDTIGVGLPIWLPNGARLRSRLEHKLYRTHRLRGYEPV 274 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P + +D W SG Y +Y + M +++ P + +++S I+SYR+LP Sbjct: 275 RGPEILKSDAWKISGHYANYKENM-YFTVIDEQEYGIKPMNCVGHIKVYQSEIRSYRDLP 333 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 F++ + R E G+ R REF DA+ F + P K + ++ + Sbjct: 334 LKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHLFCM-PSQIKENVYEILSFVDTLMSAF 392 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 G T + + + D+ I Sbjct: 393 GFTYEMEI------------------STKPAKAVGDDAVWEIATKALKDALDEKGLKYGI 434 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 E A Y D+ K+ D+L + ++ F ++ + + + Sbjct: 435 DEGGGAFYGPKIDI---KITDALKRKWQCGTIQVD----FNLPARFD----LGYIDENNE 483 Query: 309 DHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + +G+ ++ G+ W + + I + Sbjct: 484 RKQPVMLHRAIMGSFERFIGILLEHTAGELPFW------IAPTQVVIIPISNEHHKYANE 537 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +++ L + D + E + + A+ P+ +++G V++ V ++ R ++ Sbjct: 538 VHSLLLDMDVDSEIFNKNETLNKKIRTAEKQRVPMIIVLGDNEVTNRGVALRDRRAREQK 597 Query: 428 DMSLEEVINYASHRFSN 444 DMSL+E + + + + Sbjct: 598 DMSLDEFLGFIQSKLNE 614 >gi|224373363|ref|YP_002607735.1| threonyl-tRNA synthetase [Nautilia profundicola AmH] gi|254783530|sp|B9L5U7|SYT_NAUPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|223589770|gb|ACM93506.1| threonyl-tRNA synthetase [Nautilia profundicola AmH] Length = 611 Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats. Identities = 74/444 (16%), Positives = 146/444 (32%), Gaps = 46/444 (10%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD +L L + G+ WLP G N+ ++ R Sbjct: 200 YLKMLEEAAKRDHRKLGTELELWM-FDEEVGAGMPIWLPNGALLRGNLEKLLYSAHIRRE 258 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------DRNDKAMIYGPTHEEVMTDIFR 119 + + P L + +W SG Y +Y + M ++ P + IF Sbjct: 259 YLPVRGPELLRSHMWKISGHYYNYKENMYFTEIENDDPEKPADEYGIKPMNCLAHVKIFG 318 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 ++SY+ LP ++ R E G++R REF DA+ F P+ + K+ Sbjct: 319 HKVRSYKELPLRLFEFGTVHRHEKSGVLHGLLRVREFTQDDAHIFCR-PDQIEEEVIKVL 377 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 I R G + P S E + S Sbjct: 378 EFVDSIMERFGFNYEM-EISTRPEKSIGSDE-----------------IWEKATESLKKA 419 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + + I E A Y D+ K+ D++ + ++ F ++ Sbjct: 420 LNSLNREYGIDEGGGAFYGPKIDI---KITDAIGRKWQCGTIQVD----FNLPERFD--- 469 Query: 299 SATFKGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ + + V + IG+ A++ + G+ + + + + Sbjct: 470 -ITYVDENNERVRPVMIHRAIIGSFERFIAILTEHYAGEFPTFIAPIKAIFVPIA----- 523 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + + +K+ L + + + + + A+ VI+G + V V Sbjct: 524 -ESHVEYAKKLQKELLEADINTEIFASNDSLNKRIRNAEKRRVGYVVIIGDEEVETGTVA 582 Query: 418 IKHRLTGIREDMSLEEVINYASHR 441 I+ R + M+ E + + Sbjct: 583 IRDRKKREQYKMTKGEFVEMIKNL 606 >gi|149919496|ref|ZP_01907976.1| hypothetical protein PPSIR1_10610 [Plesiocystis pacifica SIR-1] gi|149819621|gb|EDM79048.1| hypothetical protein PPSIR1_10610 [Plesiocystis pacifica SIR-1] Length = 590 Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats. Identities = 70/438 (15%), Positives = 131/438 (29%), Gaps = 38/438 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K+ + + RD +L L + + G + + +R+ Sbjct: 183 LKKHLAALEEAKKRDHRKLGVELGLF--HFDPIAPASPFFTERGATIYNLLQEYVRKLYR 240 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + E+ P + +L+ SG YD Y M ++ +++ P + ++R Sbjct: 241 KYDYGEVITPQIFDMELFRTSGHYDHYKDNMF-SSEIDNREFGVKPMNCPGHCVLYRQTR 299 Query: 123 KSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR LP R E G+ R R F DA+ F + + + Sbjct: 300 KSYRELPIRMADFGRLHRYERAGVTHGLTRVRTFCQDDAHVFCRLDQLEQE-IESVTSMI 358 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L + G + + + + P E A+ V + Sbjct: 359 LETYEAFGFEDVEIEISTRPDSYLGELETWDRAEKALADVLTRQ---------------- 402 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 +I E A Y D + D+L ++ ++ F ++ L + Sbjct: 403 -GINYAINEGDGAFYGPKIDFG---VRDALRRPWQLGTCQLD----FQLPERFKLEYVSA 454 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + + R +E + Sbjct: 455 --DDARARPVMIHRAMLGSLERFFGVYLEHTAGKFPTWLAPVQIAILPIT-------DAH 505 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + K+ A G V DD E++G + A LL P +++G K V V + R Sbjct: 506 AEWARKVEAACKAAGLRVTTDDRSEKLGLKIREATLLRVPYMLVLGDKEVEAQGVAPRTR 565 Query: 422 LTGIREDMSLEEVINYAS 439 SLE+ + + Sbjct: 566 DGKTGALESLEDFVARIA 583 >gi|227499759|ref|ZP_03929859.1| proline--tRNA ligase [Anaerococcus tetradius ATCC 35098] gi|227218145|gb|EEI83411.1| proline--tRNA ligase [Anaerococcus tetradius ATCC 35098] Length = 572 Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats. Identities = 107/239 (44%), Positives = 155/239 (64%), Gaps = 1/239 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SKY++P L+++P DAE SHK + R G I + + G+YS+LPLG+K ++ + AI+RE Sbjct: 1 MKLSKYYMPTLRQDPVDAETESHKFLTRGGFIRKQASGVYSFLPLGKKVVNKIEAIVREA 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +IE+S LQ+ ++W SGR++++G EM ++ DR+D+ GPT EE T + + Sbjct: 61 MEDYDSIEVSTSILQTREIWEASGRWETFGPEMFKIKDRHDREYCLGPTAEESFTSLIKD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQI KFRDE RPRFG+ RSR+FLMKDAYSFD EG + SY KM+ + Sbjct: 121 ELNSYKQLPLNIYQIVDKFRDEKRPRFGINRSRDFLMKDAYSFDKDMEGLEVSYQKMWDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y + F R+GL + +SG +GG SHEFI L++TGE + + D D+ E F Sbjct: 181 YEQAFDRMGLDYKIVEGDSGSMGGKKSHEFIALSETGEGVILYTDD-SDYAATDEKARF 238 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 68/163 (41%), Positives = 92/163 (56%), Gaps = 1/163 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 ARGIEVG+IF GTKYS + A F +GK MGSYGIG R V+A++E Sbjct: 396 GSGILKEARGIEVGNIFQLGTKYSDSLGAYFLDENGKQQAFIMGSYGIGITRSVSAIVEQ 455 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 HD KGIIWP SVAPF+ + + +++ ++ EKIY RL + DV DD E+ G + Sbjct: 456 YHDDKGIIWPTSVAPFEAIVTIVNINNEEQKELGEKIYKRLKEERIDVLLDDRKERAGVK 515 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 F DL+G P ++ VG K SD VE R E ++ ++ Sbjct: 516 FNDRDLIGIPYRITVG-KDASDDIVEYSTRALMENEKITSDQA 557 >gi|156120539|ref|NP_001095415.1| threonyl-tRNA synthetase, mitochondrial [Bos taurus] gi|152941102|gb|ABS44988.1| threonyl-tRNA synthetase-like 1 [Bos taurus] Length = 718 Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats. Identities = 86/451 (19%), Positives = 148/451 (32%), Gaps = 57/451 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD + L H+ S G +LP G + + + A I+ E R G E+ PTL Sbjct: 300 RDHRRIGKEQELF--FFHELSPGSCFFLPRGTRVYNALVAFIKAEYTRRGFSEVKTPTLF 357 Query: 76 SADLWVESGRYDSYGKEML----------------RLADRNDKAMIYGPTHEEVMTDIFR 119 SA LW SG ++ Y ++M A + + P + +F Sbjct: 358 SAKLWELSGHWEHYREDMFALQPPGLDRPSSSQSDHSASPHTDTLALKPMNCPAHCLMFA 417 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 +S+R LP R E G+ R R F DA+ F P+ + Sbjct: 418 HRPRSWRELPLRLADFGALHRAEASGSLGGLTRLRCFQQDDAHIFCA-PDQLEAEIRGCL 476 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 ++ LG F + T + D Sbjct: 477 DFLHSVYTILGFS------------------FHMALSTRPSGFLGEPCLWDQAEQVLQQA 518 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 ++ + I A Y DVH + D+L + ++ F ++ Sbjct: 519 LEEFGAPWDISPGDGAFYGPKIDVH---VRDALGRPHQCGTIQLD----FQLPLRFD--- 568 Query: 299 SATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 +KG G + V + +G++ + V+ + G WP ++PF++ +I + Sbjct: 569 -LQYKGQLGALERPVLIHRAVLGSVERMLGVLA---ESCGGKWPLWLSPFQVVVIPVGTE 624 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + + L G D D G + + A L + Q +VG + S V Sbjct: 625 QE---EYAREAQQSLRAAGLVGDLDADSGLTLSRRIRRAQLAHYNFQFVVGQREQSKRTV 681 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 I+ R + L E + P Sbjct: 682 NIRTRDNRRLGERDLAEAVQRLLELQDTRVP 712 >gi|296489553|gb|DAA31666.1| threonyl-tRNA synthetase, mitochondrial [Bos taurus] Length = 718 Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats. Identities = 86/451 (19%), Positives = 148/451 (32%), Gaps = 57/451 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD + L H+ S G +LP G + + + A I+ E R G E+ PTL Sbjct: 300 RDHRRIGKEQELF--FFHELSPGSCFFLPRGTRVYNALVAFIKAEYTRRGFSEVKTPTLF 357 Query: 76 SADLWVESGRYDSYGKEML----------------RLADRNDKAMIYGPTHEEVMTDIFR 119 SA LW SG ++ Y ++M A + + P + +F Sbjct: 358 SAKLWELSGHWEHYREDMFALQPPGLDRPSSSQSDHSASPHTDTLALKPMNCPAHCLMFA 417 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 +S+R LP R E G+ R R F DA+ F P+ + Sbjct: 418 HRPRSWRELPLRLADFGALHRAEASGSLGGLTRLRCFQQDDAHIFCA-PDQLEAEIRGCL 476 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 ++ LG F + T + D Sbjct: 477 DFLHSVYTILGFS------------------FHMALSTRPSGFLGEPCLWDQAEQVLQQA 518 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 ++ + I A Y DVH + D+L + ++ F ++ Sbjct: 519 LEEFGAPWDISPGDGAFYGPKIDVH---VRDALGRPHQCGTIQLD----FQLPLRFD--- 568 Query: 299 SATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 +KG G + V + +G++ + V+ + G WP ++PF++ +I + Sbjct: 569 -LQYKGQLGALERPVLIHRAVLGSVERMLGVLA---ESCGGKWPLWLSPFQVVVIPVGTE 624 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + + L G D D G + + A L + Q +VG + S V Sbjct: 625 QE---EYAREAQQSLRAAGLVGDLDADSGLTLSRRIRRAQLAHYNFQFVVGQREQSKRTV 681 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 I+ R + L E + P Sbjct: 682 NIRTRDNRRLGERDLAEAVQRLLELQDTRVP 712 >gi|240170657|ref|ZP_04749316.1| threonyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478] Length = 697 Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats. Identities = 65/449 (14%), Positives = 131/449 (29%), Gaps = 47/449 (10%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 I + RD +L L + + G+ + P G + R + G + Sbjct: 267 IEEAQRRDHRKLGVELDLFS-FPDEIGSGLAVFHPKGGIVRRELEDYSRRKHTEAGYQFV 325 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDI 117 + P + A L+ SG D Y M + + P + + I Sbjct: 326 NSPHITKAQLFHTSGHLDWYADGMFPPMHIDAEHNADGSVRKPGQDYYLKPMNCPMHCLI 385 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 FR+ +SYR LP ++ +R E G+ R R M DA+ F + Sbjct: 386 FRARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDAHIFSTRDQMRDEL-RS 444 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + L + GL + + + S + + Sbjct: 445 LLRFILDLLGDYGLTDFYLELST----------------KDPDKFVGSDEVWEEATNVLA 488 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + A Y + ++ D+L ++S ++ F F ++ L Sbjct: 489 EVGAESGLDLVPDPGGAAFYGPKI---SVQVKDALGRTWQMSTIQLD----FNFPERFEL 541 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 +A + V + G++ ++ + G W V I + Sbjct: 542 DYTAA---DGTRQRPVMIHRALFGSIERFFGILTEHYAGAFPAWLAPVQVVGIPVA---- 594 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 E++ A+L G V D +++ + P ++ G + V V Sbjct: 595 --DEHVPYLEEVAAQLKSYGVRVEVDGSDDRMAKKIVHHTNQKVPFMLLAGDRDVQAGAV 652 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 + + + + + Sbjct: 653 SFRFGDRTQLNGVPRDAAVAAIVEWLATR 681 >gi|256851262|ref|ZP_05556651.1| prolyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN] gi|260660686|ref|ZP_05861601.1| prolyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN] gi|282934730|ref|ZP_06339973.1| proline--tRNA ligase [Lactobacillus jensenii 208-1] gi|297206129|ref|ZP_06923524.1| proline--tRNA ligase [Lactobacillus jensenii JV-V16] gi|256616324|gb|EEU21512.1| prolyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN] gi|260548408|gb|EEX24383.1| prolyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN] gi|281301305|gb|EFA93606.1| proline--tRNA ligase [Lactobacillus jensenii 208-1] gi|297149255|gb|EFH29553.1| proline--tRNA ligase [Lactobacillus jensenii JV-V16] Length = 565 Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats. Identities = 112/270 (41%), Positives = 149/270 (55%), Gaps = 3/270 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +F+P L+E P DA ASHK+M+R G I Q + G+YS+LPLG + L II EE Sbjct: 1 MRQSNFFMPTLKEAPADAVAASHKIMIRGGYIRQVTAGVYSYLPLGYRVLRKAERIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MDRINVPEMIMPHLLPATLWQESGRYYKYGDEMFKLKDRHGRDSLLGPTHEETFTEIIAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATKEQLDKQFDDQKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R G+ P+ A+SG +GG S EF A GE + ++ D Sbjct: 181 YKRIFKRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNEKGTYAANLEMAKSID 240 Query: 241 DIISLN---SIVEQWTAPYAATSDVHNEKL 267 +E+ P T + E L Sbjct: 241 TFKQEPEELKPMEKVATPGCETIEQLTEFL 270 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 67/193 (34%), Positives = 98/193 (50%), Gaps = 2/193 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + + NE D + IEVGHIF GT Y+ M A F +GK Sbjct: 375 DFKVDEFSDIRTANEGEPDPVDHLPLQFTTSIEVGHIFKLGTYYTETMGADFLDQNGKAQ 434 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V MGSYGIG R+++A +E + G+ WP +APF + LI +K D+V E +YA Sbjct: 435 PVIMGSYGIGVTRMLSAAVEQNLTEHGVAWPKEIAPFALHLIQMKMKDEVQTKLAESLYA 494 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + S DV +DD E+ G +FA ADL+G PL++ +G K +D VE+K L +++ Sbjct: 495 KFSDK-YDVLYDDRNERAGVKFADADLVGAPLRITIGKK-AADGIVEVKRPLDEKASEVT 552 Query: 431 LEEVINYASHRFS 443 L E+ + Sbjct: 553 LAELEALVAKELD 565 >gi|74142262|dbj|BAE31895.1| unnamed protein product [Mus musculus] Length = 722 Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats. Identities = 74/449 (16%), Positives = 151/449 (33%), Gaps = 44/449 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 305 KLLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNTLMEFIRSE 362 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M ++ P + +F Sbjct: 363 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEQ-FALKPMNCPGHCLMFDH 421 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 422 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 480 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E A+ Sbjct: 481 FLRTVYSVFGFSFKLN-LSTRPEKFLGDIEIWNQAEK-----------------QLENSL 522 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 523 NEFGEKWELNPGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 571 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 572 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---EKYGGKWPFWLSPRQVMVVPVGP- 627 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ + D D G + + A L + ++VG K + V Sbjct: 628 --TCDEYAQKVRQQFHDAKFMADTDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTV 685 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 I+ R + + ++EE + Sbjct: 686 NIRTRDNKVHGERTVEETVRRLQQLKQTR 714 >gi|237751610|ref|ZP_04582090.1| prolyl-tRNA synthetase [Helicobacter bilis ATCC 43879] gi|229372976|gb|EEO23367.1| prolyl-tRNA synthetase [Helicobacter bilis ATCC 43879] Length = 575 Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats. Identities = 119/273 (43%), Positives = 163/273 (59%), Gaps = 4/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S +F P L+E P+DA + SH +LR G IHQ GIY++LPL Q +D + I+REE Sbjct: 1 MRFSTFFAPTLKEAPKDAVLKSHIYLLRAGYIHQIGSGIYNFLPLAQIVMDKIKTIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA E+++ L LW +SGRY+ Y E+ D+ + + GPTHEE +T+I ++ Sbjct: 61 MNRAGANEITMGFLTPTSLWEQSGRYEKY-SELALFTDKKGASFVLGPTHEECVTEIAKT 119 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ LP YQI LKFRDELRPRFG++R+REF+MKDAYSF + E + M + Sbjct: 120 YIKSYKQLPLNLYQIHLKFRDELRPRFGLLRAREFVMKDAYSFHDSLESLNKEFINMRDT 179 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+RIF RLGL + A+SG IGG S EF+VLA+ GE + D+ E Sbjct: 180 YVRIFSRLGLDFRIVEADSGAIGGSGSREFMVLAECGEDTIVTCAKC-DYASNIEAA-VR 237 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 + + I Q T+ Y + N K D L + Sbjct: 238 KPKTCDEIAPQATSNYH-KFETPNVKTIDELSK 269 Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 59/191 (30%), Positives = 98/191 (51%), Gaps = 2/191 (1%) Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 +E++ Y E + ++GIEVGHIF KYS PM A F ++G Sbjct: 383 QLEEFDDLYYRDLVAVQEGDSCAKCGGTLRYSKGIEVGHIFKLEDKYSKPMQANFLLSNG 442 Query: 308 KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 MG YG+G R+++A++E D KG +W +VAPFK+ +I ++ Sbjct: 443 SSMPFTMGCYGLGVSRLISAILEQKADEKGCVWG-AVAPFKLDIIISNMKNEEEVLFATN 501 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +Y +L + G +V DD E+ GS+ A +L+GF +IVG + ++++K+E+ R IR Sbjct: 502 LYTQLQEKGIEVILDDRNERFGSKIADFELIGFEYALIVGKR-LAENKLELIKRDGLIRT 560 Query: 428 DMSLEEVINYA 438 + S ++ Sbjct: 561 EYSSANILESL 571 >gi|212715814|ref|ZP_03323942.1| hypothetical protein BIFCAT_00715 [Bifidobacterium catenulatum DSM 16992] gi|212661181|gb|EEB21756.1| hypothetical protein BIFCAT_00715 [Bifidobacterium catenulatum DSM 16992] Length = 677 Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats. Identities = 65/459 (14%), Positives = 132/459 (28%), Gaps = 50/459 (10%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K + L+E RD ++ L + + G+ + P G ++ + RE + Sbjct: 242 KAYQTRLEEAAKRDHRKLGAEMDLFS-FPDEIGPGLAVFHPKGAAVINAMEDYSREMHRK 300 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHE 111 + P + L+ SG Y M + P + Sbjct: 301 HHYSFVQTPHITKGGLYETSGHLHWYKDGMYPAMRLDEEKDENGNVIKQGFDYYLKPMNC 360 Query: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGS 170 + IF+S +SYR LP ++ +R E G+ R R D++ + + Sbjct: 361 PMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMK 420 Query: 171 KHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230 + L + GL + + + S + + Sbjct: 421 DEL-KNLLTFVLGLLKDFGLDDFYLELST----------------KDPHKYVGSDEIWEE 463 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290 + + A Y + + D++ +VS ++ F Sbjct: 464 ATNTLAEVAKESGLELIDDPCGAAFYGPKI---SVQARDAIGRTWQVSTIQLDFNLPERF 520 Query: 291 GTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 G + ADG + G++ AV+ + G W V + Sbjct: 521 G--------LEYIAADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVLGV 572 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 + ++ A L + D ++ G + A P +IVG + Sbjct: 573 PVA------DEFAPHLQQFIASLEEETVRCEIDMSDDRFGKKIRNASKSKVPFILIVGEE 626 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 ++++ V + R + +E V Sbjct: 627 DMNNNAVSFRFRDGSQLNGVPTDEAKAQIMTVLKKRVQV 665 >gi|227510249|ref|ZP_03940298.1| prolyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227189901|gb|EEI69968.1| prolyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 569 Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats. Identities = 108/272 (39%), Positives = 156/272 (57%), Gaps = 1/272 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P+ AE SHK+++R G I Q S G+Y++LPL + L + I+R+E Sbjct: 1 MKQSKILVPTLKETPKGAEALSHKMLVRAGYIKQISAGMYAYLPLAYRVLTKIETIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +T A EM +P + A+LW ESGRY++YG E+ + +R+D I GPTHEE T++ R Sbjct: 61 MEKTSAHEMLMPDVLPAELWKESGRYETYGPELFKFKNRHDTDFILGPTHEETFTELIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPR+G++RSREF+MKDAYSF +Y M + Sbjct: 121 SIKSYKQLPLVLYQIQNKYRDEDRPRYGLLRSREFIMKDAYSFAANEADLDDAYRAMEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R+GLK + + G +GG S EF +A GE + S D+ E Sbjct: 181 YRTIFDRIGLKYRVIIGDGGAMGGSDSKEFSAMAAVGEDTIVYSD-ESDYFANLEMAKSK 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 ++ E A + +++ D L Sbjct: 240 ATDEPSTEAEADLKKVATPNVKSIDEVADFLG 271 Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 68/189 (35%), Positives = 104/189 (55%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 A D K + P+ K RGIE+GHIF GT+YS ++A +G+ V MG Sbjct: 380 AVDDFVVVKEGELSPDGKGKLKFTRGIEIGHIFKLGTRYSKSLNANVLDENGRSIPVIMG 439 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+++A+ E + D G++WP +VAP+ + +I I +V + +I +L++ Sbjct: 440 SYGIGISRLLSAISEQNADENGLVWPVAVAPYTVHVIPINVKKEVQMNLANQIEEQLTEN 499 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G +FA +DLLG PL++ VG K + VEIK R G + +EE+ Sbjct: 500 GIEVLVDDRKERPGVKFADSDLLGIPLRITVGKK-ADEGIVEIKIRKNGETVESKVEELS 558 Query: 436 NYASHRFSN 444 + N Sbjct: 559 DTVKILLKN 567 >gi|301095894|ref|XP_002897046.1| threonyl-tRNA synthetase [Phytophthora infestans T30-4] gi|262108475|gb|EEY66527.1| threonyl-tRNA synthetase [Phytophthora infestans T30-4] Length = 725 Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats. Identities = 74/459 (16%), Positives = 139/459 (30%), Gaps = 65/459 (14%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L M H S G +LP G + + + IR E R G E+ Sbjct: 303 EEAKKRDHRLIGRAQQLF--MFHPLSPGSSFFLPHGTRVFNTLADFIRREYRRRGYDEVI 360 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRL---------------ADRNDKAMIYGPTHEEVMT 115 P + +LW SG +Y +M + + + + + Sbjct: 361 TPLIFKKELWETSGHLQNYHDDMFMVSQGIATDDACEEHGHTHSHGEEEYDQFGLKPMNC 420 Query: 116 DIFRSHIK-----SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEG 169 + SYR LP R+E G+ R R F DA+ F + Sbjct: 421 PGHCLLFREAKKYSYRELPVRLADFSALHRNEASGALTGLTRVRRFHQDDAHIFCTAAQV 480 Query: 170 SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMD 229 + +++ + + +R + P E D Sbjct: 481 QSEMSLAL--DFIKHVYGIFDFKFNLRLSTRPEKYMGDLE-----------------LWD 521 Query: 230 FPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY 289 DD ++ E A Y D+ + D+L + ++ F Sbjct: 522 DAEDQLRLALDDFGQPWTVNEGDGAFYGPKIDI---VVTDALQRQHQCGTIQLD----FQ 574 Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPF 347 + GADG+ H + + R++A +IE + + Sbjct: 575 LPI----NFELEYDGADGEAHTPIIIHRAVLGSIERMMAILIEHTGGKWPLWLSPRQVAV 630 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKV---GCDVFWDDMGEQIGSQFAVADLLGFPLQV 404 + R+ ++ + L G V D + + + A + G+ + Sbjct: 631 LPIA-------EAHREYAYEVASTLQNATARGLYVDVQDGSKTLNKRIREAQVAGYNYIL 683 Query: 405 IVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 +VG K + +V I+ R + L + I+ + Sbjct: 684 VVGDKEQASGEVNIRTRDNQVHGAKPLGDFIDDITAAID 722 >gi|22299745|ref|NP_682992.1| threonyl-tRNA synthetase [Thermosynechococcus elongatus BP-1] gi|73919834|sp|Q8DGW0|SYT_THEEB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|22295929|dbj|BAC09754.1| threonyl-tRNA synthetase [Thermosynechococcus elongatus BP-1] Length = 605 Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats. Identities = 76/441 (17%), Positives = 139/441 (31%), Gaps = 41/441 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD +L L G+ W P G + +++EQ + G + + Sbjct: 189 EEALRRDHRKVGKELGLFI-FADPVGPGLPLWTPRGTVLRSTLEDFLKKEQLKRGYLPVV 247 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKA------MIYGPTHEEVMTDIFRSHIKS 124 P + DL+ SG + Y ++M L + +A + P + I++S ++S Sbjct: 248 TPHIARVDLFKTSGHWQKYKEDMFPLMAEDAEAAAHEQGFVLKPMNCPFHIQIYKSELRS 307 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR+LP + +R E G + D +TPE + + L + Sbjct: 308 YRDLPLRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDAEFLNVVDLILTV 367 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F L L R D + S + + + + Sbjct: 368 FRCLRLNKFKARLS--------------FRDPKSDKYIGSDEAWSKAEAAIQRAVEQLGM 413 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + + A Y D E D+L ++ ++ + Sbjct: 414 EHFLGIGEAAFYGPKLDFIFE---DALGREWQLGTVQVDYNLP--------ERFDLEYVA 462 Query: 305 ADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 D M R++ +IE R Sbjct: 463 EDNTRRRPVMIHRAPFGSLERLIGILIEEYAGDFPFWLAPEQVRLLPVG-------DEQR 515 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 E++ A+L + G V D G+++G Q A+ P+ I+G+K V V I+ R Sbjct: 516 PYAERVAAQLRERGVRVSVDRSGDRLGKQIRNAETQKIPVMGIIGAKEVEHETVSIRTRA 575 Query: 423 TGIREDMSLEEVINYASHRFS 443 G +LE +I + + Sbjct: 576 AGDVGTFALEHLIAKLTSAMA 596 >gi|291542490|emb|CBL15600.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Ruminococcus bromii L2-63] Length = 648 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 80/444 (18%), Positives = 159/444 (35%), Gaps = 36/444 (8%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E RD +L T + +G+ LP G + + + + + + G Sbjct: 233 LKKLEEAKLRDHNKLGRELEYFTT-VDYVGQGLPILLPKGARVVQLLQRWVEDVEQSKGC 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA---MIYGPTHEEVMTDIFRSHIK 123 + P L DL+ SG +D Y M L D +D+ P ++ + + Sbjct: 292 LLTKTPLLAKRDLYKISGHWDHYLDGMFVLGDPHDEEKECFALRPMTCPFQYQVYLNKQR 351 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + FR+E G++R R+F + + + L P+ + + Sbjct: 352 SYRDLPMRLTETSTLFRNEASGEMHGLIRVRQFTISEGHYI-LRPDQLEQEFKGCLELAK 410 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA-DTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ + + + F + + +K+ + T DD Sbjct: 411 YF------------LDTVGLLENCTFRFSQWDPENKNNKYEGTKEQWEESQAVMKTILDD 458 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + I A Y D+ + +F + + I++ FG Sbjct: 459 LDVDYEIGIDEAAFYGPKLDIQYKNVF---GKEDTIVTIQIDMLLAERFG--------MY 507 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + DG+ + ++ + + + P +AP +I L+ IK + Sbjct: 508 YIDKDGQKKLPYIIHRT--SLGCFERTLAYMIERFAGVMPLWLAPEQIRLLPIK---EGN 562 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + I RL+ +G V D E IG + A L P +++G ++ S V ++ R Sbjct: 563 VEYAQGIADRLTSLGMRVTVDSRDENIGPKIKAARLERIPYILVIGDNEMNSSTVTVRSR 622 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 G +M ++E + + Sbjct: 623 KRGEIPNMPVDEFVALVKNEVDTK 646 >gi|238854745|ref|ZP_04645075.1| proline--tRNA ligase [Lactobacillus jensenii 269-3] gi|260663977|ref|ZP_05864830.1| prolyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US] gi|282932864|ref|ZP_06338261.1| proline--tRNA ligase [Lactobacillus jensenii 208-1] gi|313472268|ref|ZP_07812760.1| proline--tRNA ligase [Lactobacillus jensenii 1153] gi|238832535|gb|EEQ24842.1| proline--tRNA ligase [Lactobacillus jensenii 269-3] gi|239529664|gb|EEQ68665.1| proline--tRNA ligase [Lactobacillus jensenii 1153] gi|260561863|gb|EEX27832.1| prolyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US] gi|281302899|gb|EFA95104.1| proline--tRNA ligase [Lactobacillus jensenii 208-1] Length = 565 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 113/273 (41%), Positives = 149/273 (54%), Gaps = 3/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S +F+P L+E P DA ASHK+M+R G I Q + G+YS+LPLG + L II EE Sbjct: 1 MRQSNFFMPTLKEAPADAVAASHKIMIRGGYIRQVTAGVYSYLPLGYRVLRKAERIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R EM +P L A LW ESGRY YG EM +L DR+ + + GPTHEE T+I Sbjct: 61 MDRINVPEMIMPHLLPATLWQESGRYYKYGDEMFKLKDRHGRDSLLGPTHEETFTEIIAK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NLKSYKQMPLALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDKQFDDQKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF R G+ P+ A+SG +GG S EF A GE + ++ D Sbjct: 181 YKRIFKRAGVTVHPVIADSGTMGGKNSTEFQAPAAIGEDTIATNEKGTYAANLEMAKSID 240 Query: 241 DIISLN---SIVEQWTAPYAATSDVHNEKLFDS 270 +E+ P T D E L Sbjct: 241 TFKQEPEELKTMEKVATPGCETIDQLTEFLHVP 273 Score = 144 bits (362), Expect = 4e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 2/193 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + + NE D + IEVGHIF GT Y+ M A F +GK Sbjct: 375 DFKVDEFSDIRTANEGEPDPVDHLPLQFTTSIEVGHIFKLGTYYTETMGADFLDQNGKAQ 434 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V MGSYGIG R+++A +E + G+ WP +APF + LI +K +D+ E + Sbjct: 435 PVIMGSYGIGVTRMLSAAVEQNLTEHGVAWPKEIAPFTLHLIQMKMNDEDQTKLAESLET 494 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 + S+ DV +DD E+ G +FA ADL+G P+++ +G K +D VE+K ++S Sbjct: 495 KFSEK-YDVLYDDRKERAGVKFADADLVGAPIRITIGKK-AADGIVEVKRPTDDKAVEIS 552 Query: 431 LEEVINYASHRFS 443 ++++ + + Sbjct: 553 VDDLEAFVAKELD 565 >gi|54025682|ref|YP_119924.1| threonyl-tRNA synthetase [Nocardia farcinica IFM 10152] gi|54017190|dbj|BAD58560.1| putative threonyl-tRNA synthetase [Nocardia farcinica IFM 10152] Length = 703 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 60/448 (13%), Positives = 124/448 (27%), Gaps = 49/448 (10%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + G+ + P G + R G ++ Sbjct: 273 EAERRDHRKLGLELDLFS-FPDELGSGLPVFHPKGGIIRKELEEYSRRRHVDAGYEFVNT 331 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDIFR 119 P + L+ SG D Y M + + P + + IFR Sbjct: 332 PHITKGHLFEVSGHLDWYRDGMFPAMHLDAEYNDDGTVRKPGQDYYVKPMNCPMHNLIFR 391 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + +SYR LP ++ +R E G+ R R DA+ + + Sbjct: 392 ARGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTKEQMHAEL-TNTL 450 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L + GL + + + S + + + + Sbjct: 451 QFVLGLLADYGLDDFYLELST----------------KDPKKFVGSDEIWEEATETLSKV 494 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 A Y + + D+L ++S ++ FG Sbjct: 495 AQASGLELVPDPGGAAFYGPKI---SVQAKDALGRTWQMSTIQLDFNLPERFG------- 544 Query: 299 SATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + DG + G++ V+ + G W V I + Sbjct: 545 -LEYTAPDGSKQRPVMIHRALFGSIERFFGVLTEHYAGAFPAWLSPVQVVGIPVA----- 598 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + +++ L G D +++ + P ++ G + V+ V Sbjct: 599 -EAFAPHLDRVVELLRDHGVRAQVDRSDDRMQKKIFNNTAQKVPFMLLAGERDVNAGAVS 657 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 + R + + + + +N Sbjct: 658 FRFRDGTQVNGVPVADAVATIVAWITNR 685 >gi|86608604|ref|YP_477366.1| prolyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)] gi|114152268|sp|Q2JMD8|SYP_SYNJB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|86557146|gb|ABD02103.1| prolyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 609 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 107/241 (44%), Positives = 146/241 (60%), Gaps = 6/241 (2%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ L+E+P +AE+ SHKL+LR I + S GIY++LPL + L ++ I+R+E Sbjct: 6 RLSQMLFVTLREDPVEAELPSHKLLLRGCFIRRLSPGIYTYLPLLWRVLQKISEIVRQEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDIF 118 N G E +P LQ A++W ESGR+D Y + M L DR + GPTHEEV+T + Sbjct: 66 NAIGGQECLLPQLQPAEIWRESGRWDVYTQAEGIMFALKDRQGREQSLGPTHEEVITLLA 125 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 R I+SYR LP T YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E + +Y M+ Sbjct: 126 RDLIRSYRQLPQTLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHANEESLRQTYQDMY 185 Query: 179 VSYLRIFHRLGLKSIPMRAESGPI--GGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 +Y RI R GL+ + A++G I S EF+VLA GE ++ + D + E Sbjct: 186 RAYSRILRRCGLEFRVVDADAGAIGGPSAASQEFMVLASAGEDEILYTPDGS-YAANVEK 244 Query: 237 T 237 Sbjct: 245 A 245 Score = 171 bits (434), Expect = 2e-40, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 100/196 (51%), Gaps = 4/196 (2%) Query: 251 QWTAPYAATSDVHNEKLFDSL---PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 P DV + D P+ +ARGIE+GHIF G K+SLPM ATF G Sbjct: 408 GEQYPLPEVVDVRKAQAGDRCLLNPDQILETARGIEIGHIFQLGLKFSLPMRATFTDEQG 467 Query: 308 KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + + MG YGIG R+ A +E SHD GIIWP ++AP+ + ++ D EK Sbjct: 468 SEQPLWMGCYGIGVSRLAQAAVEQSHDANGIIWPVAIAPYHVVVVVPNISDPEQMSVAEK 527 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + L+ G + WDD E+ G +F ADL+G P ++ G + + KVE+ R +G Sbjct: 528 LVQDLATAGIETLWDDRDERAGVKFKDADLIGIPYRITTG-RSLKQGKVELTERASGQAT 586 Query: 428 DMSLEEVINYASHRFS 443 ++ +EEV+ R Sbjct: 587 EIPIEEVVTTLKERIE 602 >gi|325188237|emb|CCA22777.1| unnamed protein product [Albugo laibachii Nc14] Length = 756 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 74/437 (16%), Positives = 145/437 (33%), Gaps = 40/437 (9%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD L H S G WLP G + +R + G E+ Sbjct: 354 EATKRDHRRLGLSQDLY--FFHSLSPGSAFWLPNGAHIFSKLLEFLRAQYRERGYNEVIT 411 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + + +LW SG Y + M + + + P + +F ++SYR LP Sbjct: 412 PNMFNMELWNTSGHAAHYKENMF-VFEVESQEFALKPMNCPSHCLMFDHRLRSYRELPIR 470 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + + R+EL G+ R R F DA+ F + K L Sbjct: 471 YADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCREDQIKKEII-------------DFL 517 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + + ++ I F + T + + + + D+ I N E Sbjct: 518 QFMKFVYDTFDI------RFQLELSTRPAKAMGELEQWNRAEAQLASALDEFIGKNQWRE 571 Query: 251 --QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A Y D+ + D+L + + ++ F +++L + +G Sbjct: 572 NPGDGAFYGPKIDIM---ITDALNRQHQCATVQLD----FQLPIRFNLKYRS--DDEEGF 622 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + + G++ AV+ + K W I I + ++ Sbjct: 623 KRPIIIHRAIYGSLERFIAVLVEHYAAKFPFW------LSPRQILIVTVGAAFVEYGYQV 676 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 + + G V +D G+ + + L + ++VG+K V I+ R + Sbjct: 677 KEAIFRAGFQVEIEDSGKTLNKKIREGQLAHYNFILVVGAKEQETQSVNIRTRDNKVHGT 736 Query: 429 MSLEEVINYASHRFSNN 445 +++E I+ ++ Sbjct: 737 KTIQEAIDMFQSLENSR 753 >gi|227524393|ref|ZP_03954442.1| prolyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290] gi|227088624|gb|EEI23936.1| prolyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290] Length = 569 Score = 207 bits (526), Expect = 4e-51, Method: Composition-based stats. Identities = 108/272 (39%), Positives = 156/272 (57%), Gaps = 1/272 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P+ AE SHK+++R G I Q S G+Y++LPL + L + I+R+E Sbjct: 1 MKQSKILVPTLKETPKGAEALSHKMLVRAGYIKQISAGMYAYLPLAYRVLTKIETIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +T A EM +P + A+LW ESGRY++YG E+ + +R+D I GPTHEE T++ R Sbjct: 61 MEKTSAHEMLMPDVLPAELWKESGRYETYGPELFKFKNRHDTDFILGPTHEETFTELIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPR+G++RSREF+MKDAYSF +Y M + Sbjct: 121 SIKSYKQLPLILYQIQNKYRDEDRPRYGLLRSREFIMKDAYSFAANEADLDDAYRAMEKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R+GLK + + G +GG S EF +A GE + S D+ E Sbjct: 181 YRTIFDRIGLKYRVIIGDGGAMGGSDSKEFSAMAAVGEDTIVYSD-ESDYFANLEMAKSK 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLP 272 ++ E A + +++ D L Sbjct: 240 VTDEPSTEAEADLKKVATPNVKSIDEVADFLG 271 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 68/189 (35%), Positives = 104/189 (55%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 A D K + P+ K RGIE+GHIF GT+YS ++A +G+ V MG Sbjct: 380 AVDDFVVVKEGELSPDGKGKLKFTRGIEIGHIFKLGTRYSKSLNANVLDENGRSIPVIMG 439 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG R+++A+ E + D G++WP +VAP+ + +I I +V + +I +L++ Sbjct: 440 SYGIGISRLLSAISEQNADENGLVWPVAVAPYTVHVIPINVKKEVQMNLANQIEEQLTEN 499 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G +FA +DLLG PL++ VG K + VEIK R G + +EE+ Sbjct: 500 GIEVLVDDRRERPGVKFADSDLLGIPLRITVGKK-ADEGIVEIKIRKNGETVESKVEELS 558 Query: 436 NYASHRFSN 444 + N Sbjct: 559 DTVKILLKN 567 >gi|148671336|gb|EDL03283.1| threonyl-tRNA synthetase, isoform CRA_a [Mus musculus] Length = 544 Score = 207 bits (526), Expect = 4e-51, Method: Composition-based stats. Identities = 74/449 (16%), Positives = 151/449 (33%), Gaps = 44/449 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 127 KLLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNTLMEFIRSE 184 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + + P + +F Sbjct: 185 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSF-EVEKEQFALKPMNCPGHCLMFDH 243 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 244 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 302 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E A+ Sbjct: 303 FLRTVYSVFGFSFKLN-LSTRPEKFLGDIEIWNQAEK-----------------QLENSL 344 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 345 NEFGEKWELNPGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 393 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 394 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 449 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ + D D G + + A L + ++VG K + V Sbjct: 450 --TCDEYAQKVRQQFHDAKFMADTDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTV 507 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 I+ R + + ++EE + Sbjct: 508 NIRTRDNKVHGERTVEETVRRLQQLKQTR 536 >gi|47479652|gb|AAH69346.1| TARSL2 protein [Homo sapiens] gi|47480952|gb|AAH69811.1| TARSL2 protein [Homo sapiens] Length = 466 Score = 207 bits (526), Expect = 4e-51, Method: Composition-based stats. Identities = 74/447 (16%), Positives = 150/447 (33%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + + + +E RD + L H S G +LP G + + IREE Sbjct: 49 KMMRDWEKFQEEAKNRDHRKIGKEQELF--FFHDLSPGSCFFLPRGAFIYNTLTDFIREE 106 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ E+ P + ++ LW SG + Y + M D P + +F Sbjct: 107 YHKRDFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIEKDT-FALKPMNCPGHCLMFAH 165 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R +P F + R+EL G+ R R F DA+ F + + Sbjct: 166 RPRSWREMPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQ-IEEEIKGCLQ 224 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G F + T + + Sbjct: 225 FLQSVYSTFGFS------------------FQLNLSTRPENFLGEIEMWNEAEKQLQNSL 266 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D + A Y D+ K+ D++ + + ++ F +++L Sbjct: 267 MDFGEPWKMNPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRFNLTYV 319 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K V + +G++ + A++ + G WP ++P ++ +I + Sbjct: 320 SK--DGDDKKRPVIIHRAILGSVERMIAILS---ENYGGKWPFWLSPRQVMVIPVGP--- 371 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C ++ + + G D D + + A L + ++VG K D+ V + Sbjct: 372 TCEKYALQVSSEFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNV 431 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R I ++ + I+ + Sbjct: 432 RTRDNKIHGEILVTSAIDKLKNLRKTR 458 >gi|33519811|ref|NP_878643.1| threonyl-tRNA synthetase [Candidatus Blochmannia floridanus] gi|33504156|emb|CAD83418.1| threonyl-tRNA synthetase [Candidatus Blochmannia floridanus] Length = 410 Score = 207 bits (526), Expect = 4e-51, Method: Composition-based stats. Identities = 73/435 (16%), Positives = 139/435 (31%), Gaps = 38/435 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + D SH+L L + + + G+ W G + IR++ + E+ Sbjct: 6 KIKKYDHRNLSHQLDLY--HLQEDAPGMVFWHVNGWTIFQELKNFIRKKLQQYQYQEVKS 63 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 PT+ LW ++G +D+Y E + D ++ P + IF +K+Y++LP Sbjct: 64 PTMIDRVLWKKTGHWDNYY-EHIFTTDSENRKYCIKPMNCPGHIQIFNHGLKTYKDLPIR 122 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + R+EL G+MR REF DA+ F + Y+ + + Y Sbjct: 123 MAEFGSCHRNELSGSLHGLMRIREFTQDDAHIFCALTQIPNELYHCIKMMYDIYHVFNF- 181 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + IV T + D + + Sbjct: 182 -----------------KKIIVKLSTRPKKRIGEDSVWDVAEQYLSDVLKQNNIEFTYQP 224 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y + L DSL + + ++ +KY + Sbjct: 225 NDGAFYGPKIEFI---LLDSLKRSWQCGTIQLDFTLPKLLESKY-------IDNNNSYQT 274 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V + +G++ VI + G W + +++ ++ Sbjct: 275 PVIIHRAVLGSIERFIGVITEEYLGFFPTWLAPIQIIIMNVT------DGQISYVIELAK 328 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +LS V D E I + + P +I G+ ++ V I+ ++ Sbjct: 329 KLSNKNFRVKIDLRNETISFKIRSHIIHRIPYMLICGNAEMNQKTVSIRTFRGKNFKNYK 388 Query: 431 LEEVINYASHRFSNN 445 ++ I H N Sbjct: 389 IDIFIEKLQHEIYNY 403 >gi|220926910|ref|YP_002502212.1| threonyl-tRNA synthetase [Methylobacterium nodulans ORS 2060] gi|219951517|gb|ACL61909.1| threonyl-tRNA synthetase [Methylobacterium nodulans ORS 2060] Length = 670 Score = 207 bits (526), Expect = 4e-51, Method: Composition-based stats. Identities = 74/438 (16%), Positives = 138/438 (31%), Gaps = 35/438 (7%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E R D ++ L + G+ W P G + A +R + Sbjct: 232 YLHRLEEAERRDHRRLGREMDLF--HFQEEGPGVVFWHPKGWTLFQELIAYMRRRL-KGD 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E++ P + LW SG +D Y + M +++ P + IF+ +KSY Sbjct: 289 YREVNAPQILDKALWETSGHWDWYRENMFVTKTEDERVFAIKPMNCPGHVQIFKHGLKSY 348 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R E G+MR R F DA+ F + + L Sbjct: 349 RDLPLRLAEFGAVSRYEPSGALHGLMRVRAFTQDDAHVFCTEDQLAAECLKIN-DLILST 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G I ++ + P S A+ E + T + Sbjct: 408 YADFGFDEIVVKLSTRPEKRVGSDALWDHAE--EVMTRVLAQIEEQSGGRIRTAIN---- 461 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y + L D++ + + ++ FG A + Sbjct: 462 -----PGEGAFYGPKFEY---VLRDAIGRDWQCGTTQVDFNLPERFG--------AFYVD 505 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ADG+ + G+M A ++ G +W + ++ Sbjct: 506 ADGQKKTPVMVHRAICGSMERFAGILIEHFAGHFPLWLAPLQVVVATIT------SDADL 559 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 ++ A G D E+I + P+ ++VG + + V I+ + Sbjct: 560 YAREVLAAAEAAGLRAELDLRNEKINYKVREHSHAKVPVMLVVGRREGEEGTVSIRRLGS 619 Query: 424 GIREDMSLEEVINYASHR 441 L++ + Sbjct: 620 QQTRTAPLDQALAELVAE 637 >gi|302036852|ref|YP_003797174.1| prolyl-tRNA synthetase [Candidatus Nitrospira defluvii] gi|190343267|gb|ACE75655.1| prolyl-tRNA synthetase [Candidatus Nitrospira defluvii] gi|300604916|emb|CBK41249.1| Prolyl-tRNA synthetase [Candidatus Nitrospira defluvii] Length = 543 Score = 207 bits (526), Expect = 4e-51, Method: Composition-based stats. Identities = 116/257 (45%), Positives = 166/257 (64%), Gaps = 1/257 (0%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 MLR G+I + + GIY++LPLG + L + I+REE NR GA E+ +P A+LW E+GR Sbjct: 1 MLRAGLIRKVAAGIYTYLPLGLRVLRKIERIVREEMNRAGAQELLMPVASPAELWRETGR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 +D YGKE+LR DR+++ GPTHEEV+TD+FR ++SYR +P FYQIQ KFRDE+RP Sbjct: 61 WDFYGKELLRFKDRHERDFCLGPTHEEVITDLFRREVRSYRQMPLNFYQIQTKFRDEIRP 120 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 RFG+MR REF+MKDAYSFD G++ +Y KM+ +Y RIF R GL P+ A++G IGG Sbjct: 121 RFGLMRGREFIMKDAYSFDRDEAGARLNYQKMYDAYNRIFTRCGLTFRPVEADTGLIGGT 180 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 SHEF+VLA+TGE + S+D + E + + ++ ++ AP + + E Sbjct: 181 SSHEFMVLAETGEETIVYSEDGT-YAANVERAEVLPPDTADTSAQRPLAPVSTPNRRTVE 239 Query: 266 KLFDSLPENKRVSARGI 282 ++ L R + + Sbjct: 240 EVTAFLKIEPRQLVKTL 256 Score = 162 bits (411), Expect = 7e-38, Method: Composition-based stats. Identities = 77/230 (33%), Positives = 120/230 (52%), Gaps = 10/230 (4%) Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE-- 273 G+ V +F+ ++ D + V+Q+ D+ N + DS P Sbjct: 319 IGDWAVKAMANFVVGANQADTHFVDANWERDFKVDQFA-------DLRNARAGDSSPRKD 371 Query: 274 NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 +A+GIEVGH+F GTKYS M ATF A G++ MG YGIG R AA +E +H Sbjct: 372 GTLKTAKGIEVGHVFMLGTKYSQAMKATFLDAQGQEQLAVMGCYGIGVSRTAAASVEQNH 431 Query: 334 DGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 D KGI WP +APF ++L+ + + Q E +Y + + G +V WDD E+ G +F Sbjct: 432 DAKGIKWPVPIAPFHVTLLPL-SQSQPVTQLAETLYRAMQEAGIEVLWDDRDERAGVKFN 490 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 ADL+G P +++G K ++ +VE+K R TG + ++ ++V+ S Sbjct: 491 DADLIGAPYHLVIGEKGLAQGQVELKLRHTGETQKVAPDQVVALLSSFLK 540 >gi|312077291|ref|XP_003141239.1| threonyl-tRNA synthetase [Loa loa] gi|307763596|gb|EFO22830.1| threonyl-tRNA synthetase [Loa loa] Length = 681 Score = 207 bits (526), Expect = 4e-51, Method: Composition-based stats. Identities = 60/432 (13%), Positives = 135/432 (31%), Gaps = 45/432 (10%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD L H S G W P G +++ IR+E + G E+ Sbjct: 276 EEAAKRDHRKIGRDQELY--FFHPLSPGSAFWYPKGAHIYNSLCNFIRKEYRKRGFTEVI 333 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + ++ LW +SG ++ Y M + D + P + ++ +++ LP Sbjct: 334 SPNMYNSKLWEQSGHWEHYSDNMFK-IDIEKETFGLKPMNCPGHCLMYSHMPRTHNELPL 392 Query: 131 TFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + + R + ++ F DA+ F + + ++ + Sbjct: 393 RYADFGVLHRKKTVEEITII----FQQDDAHIFCRQDQVVEE-IMNCIDFLKYAYNDVFG 447 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + + + P E + + + + Sbjct: 448 FTFKLNLSTRP----------------EVGYLGDIETWNSAEDKLKEALNASGHKWELNP 491 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D+ + D+L + + ++ F ++ ++ + + Sbjct: 492 GDGAFYGPKIDI---TIQDALRRLHQCATIQLD----FQLPIRFD----LSYFDENSERQ 540 Query: 311 YVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 M + R+ A + E+ A + D + Sbjct: 541 RPVMIHRALLGSIERMTAILAENYGGKWPFWLSPRQAKVITV-------HESQNDYGRVV 593 Query: 369 YARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 ++ + G +V +D D + + Q A L F ++VG + V ++ R +R Sbjct: 594 QRKIYEAGFEVEFDADSSDTLNKQIRNAQLAQFNFILVVGPTEARNGTVNVRTRDNAVRG 653 Query: 428 DMSLEEVINYAS 439 ++ LE++I Sbjct: 654 EIKLEDLIEKFK 665 >gi|152990768|ref|YP_001356490.1| prolyl-tRNA synthetase [Nitratiruptor sp. SB155-2] gi|166980135|sp|A6Q3S4|SYP_NITSB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|151422629|dbj|BAF70133.1| prolyl-tRNA synthetase [Nitratiruptor sp. SB155-2] Length = 569 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 110/266 (41%), Positives = 159/266 (59%), Gaps = 1/266 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK F+P ++ENP+DA + SH ++R G I Q + GIY++LP+G+K LD + AI++EE Sbjct: 1 MRFSKTFIPTMKENPKDAVLPSHIYLVRGGFITQVASGIYNFLPIGKKVLDKIRAIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G E+S+ + +LW ESGR YGKE+LR DR + + GPTHEE+M D+ R+ Sbjct: 61 LDKAGCQEVSLGFVTPCELWEESGRLGKYGKELLRFKDRKENCFVLGPTHEEMMVDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQI KFRDE RPRFG++R REFLMKD YSF E + Y+ M + Sbjct: 121 RVTSYKQLPLNLYQINWKFRDEARPRFGLLRGREFLMKDGYSFHADEEDMRREYDLMEKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSENTDF 239 Y IF RLGL+ + A+ G IGG+ S EF+VLA++GE + C++ + + Sbjct: 181 YRNIFGRLGLRFRAVEADVGAIGGNASKEFMVLAESGEDTIAICTECEYAANVEAAKRKK 240 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNE 265 + + Y +E Sbjct: 241 TKAPAEAPEFSNFEPFYTPNLSSIDE 266 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 71/191 (37%), Positives = 102/191 (53%), Gaps = 3/191 (1%) Query: 257 AATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A D+ K D P+ +GIEVGHIF GT+YS M+ATF DGK M Sbjct: 380 ALFVDIAQVKEGDLCPKCGAVMKLTKGIEVGHIFQLGTRYSAAMNATFLDKDGKAKPFVM 439 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G+YGIG R+VAA IE +HD +G IWP +APF++ +I D+ E++Y +L Sbjct: 440 GTYGIGVSRLVAASIEQNHDERGCIWPLQIAPFEVDIIVSNIKDEEQIAFGEELYEQLKN 499 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV DD E+ G + +L+GFP +IVG K + + V+I R T + ++ E+V Sbjct: 500 AGVDVILDDRPERFGPKIKDFELIGFPYGIIVG-KGLKEGTVQIVQRETLDKVEIPKEDV 558 Query: 435 INYASHRFSNN 445 + + Sbjct: 559 FKTILEKVQAS 569 >gi|26326983|dbj|BAC27235.1| unnamed protein product [Mus musculus] Length = 722 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 74/449 (16%), Positives = 150/449 (33%), Gaps = 44/449 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 305 KLLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNTLMEFIRSE 362 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M ++ P + +F Sbjct: 363 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEQ-FALKPMNCPGHCLMFDH 421 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 422 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 480 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E A+ Sbjct: 481 FLRTVYSVFGFSFKLN-LSTRPEKFLGDIEIWNQAEK-----------------QLENSL 522 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + + F ++ + Sbjct: 523 NEFGEKWELNPGDGAFYGPKIDI---QIKDAIGRYHQCATIQLY----FQLPIRF----N 571 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 572 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 627 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ + D D G + + A L + ++VG K + V Sbjct: 628 --TCDEYAQKVRQQFHDAKFMADTDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTV 685 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 I+ R + + ++EE + Sbjct: 686 NIRTRDNKVHGERTVEETVRRLQQLKQTR 714 >gi|327308738|ref|XP_003239060.1| threonyl-tRNA synthetase [Trichophyton rubrum CBS 118892] gi|326459316|gb|EGD84769.1| threonyl-tRNA synthetase [Trichophyton rubrum CBS 118892] Length = 764 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 81/474 (17%), Positives = 144/474 (30%), Gaps = 53/474 (11%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + + L L+E R+ + L + S G LP G K + + ++R E Sbjct: 310 KLLQEHLKFLEEAEKRNHLKIGKEQELF--FFDEVSPGCPFLLPNGTKIFNALQKLLRTE 367 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + +W +SG + Y +M +L D + P + +F Sbjct: 368 YRKRGYQEVQSPNMYDVGIWRQSGHWAHYKDDMFKL-DVEKRDWALKPMNCPGHCIMFGH 426 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SYR LP + R+E G+ R R+F D + F + + +F Sbjct: 427 RERSYRELPLRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTDNQIMEE-IEGLFD 485 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 I+ G ++ + P E A+ + D Sbjct: 486 FLRAIYGLFGFSF-KLKLSTRPEKYLGKLETWDFAEAQLREALTKFKGAD---------- 534 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY----- 294 I E A Y D+ + D+L + + ++ F +Y Sbjct: 535 ------WEIDEGDGAFYGPKIDI---TISDALKREHQCATIQLDYQLPLNFKLEYMTGET 585 Query: 295 -----------SLPMSATFKGADGKDHYVQMGSYGIGAMRV---VAAVIESSHDGKGIIW 340 + A + + G G R A+I S GI+ Sbjct: 586 VPKSAAPATSKAEAKPAEGDSNPAQAQPSDSSTPGPGRARPVVIHRAIIGSFERFFGILI 645 Query: 341 PDSVAPFKISLIN----IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 + L I D E++ L +V D G + + Sbjct: 646 EHFGGKWPFWLSPRQILIVPVMASANDYVEELQEILRGDKLNVDIDLSGHTMQKKIRNGQ 705 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED----MSLEEVINYASHRFSNNR 446 L + +VG++ V I++R + + LEE R Sbjct: 706 LAQYNFIFVVGAQEKESRSVNIRNRDDPSSQTKGSLVPLEEARAKLRALRKERR 759 >gi|302656156|ref|XP_003019834.1| hypothetical protein TRV_06122 [Trichophyton verrucosum HKI 0517] gi|291183606|gb|EFE39210.1| hypothetical protein TRV_06122 [Trichophyton verrucosum HKI 0517] Length = 764 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 81/474 (17%), Positives = 144/474 (30%), Gaps = 53/474 (11%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + + L L+E R+ + L + S G LP G K + + ++R E Sbjct: 310 KLLQEHLKFLEEAEKRNHLKIGKEQELF--FFDEVSPGCPFLLPNGTKIFNALQKLLRTE 367 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + +W +SG + Y +M +L D + P + +F Sbjct: 368 YRKRGYQEVQSPNMYDVGIWRQSGHWAHYKDDMFKL-DVEKRDWALKPMNCPGHCIMFGH 426 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SYR LP + R+E G+ R R+F D + F + + +F Sbjct: 427 RERSYRELPLRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTDNQIMEE-IEGLFD 485 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 I+ G ++ + P E A+ + D Sbjct: 486 FLRAIYGLFGFSF-KLKLSTRPEKYLGKLETWDFAEAQLREALTKFKGAD---------- 534 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY----- 294 I E A Y D+ + D+L + + ++ F +Y Sbjct: 535 ------WEIDEGDGAFYGPKIDI---TISDALKREHQCATIQLDYQLPLNFKLEYMTGET 585 Query: 295 -----------SLPMSATFKGADGKDHYVQMGSYGIGAMRV---VAAVIESSHDGKGIIW 340 + A + + G G R A+I S GI+ Sbjct: 586 VPKSAAPATSKAEAKPAEGDSNPAQAQPSDSSTPGPGRARPVVIHRAIIGSFERFFGILI 645 Query: 341 PDSVAPFKISLIN----IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 + L I D E++ L +V D G + + Sbjct: 646 EHFGGKWPFWLSPRQILIVPVMASANDYVEELQEILRGDKLNVDIDLSGHTMQKKIRNGQ 705 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED----MSLEEVINYASHRFSNNR 446 L + +VG++ V I++R + + LEE R Sbjct: 706 LAQYNFIFVVGAQEKESRSVNIRNRDDPSSQTKGSLVPLEEARAKLRALRKERR 759 >gi|302497531|ref|XP_003010766.1| hypothetical protein ARB_03468 [Arthroderma benhamiae CBS 112371] gi|291174309|gb|EFE30126.1| hypothetical protein ARB_03468 [Arthroderma benhamiae CBS 112371] Length = 764 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 81/474 (17%), Positives = 144/474 (30%), Gaps = 53/474 (11%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + + L L+E R+ + L + S G LP G K + + ++R E Sbjct: 310 KLLQEHLKFLEEAEKRNHLKIGKEQELF--FFDEVSPGCPFLLPNGTKIFNALQKLLRTE 367 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + +W +SG + Y +M +L D + P + +F Sbjct: 368 YRKRGYQEVQSPNMYDVGIWRQSGHWAHYKDDMFKL-DVEKRDWALKPMNCPGHCIMFGH 426 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SYR LP + R+E G+ R R+F D + F + + +F Sbjct: 427 RERSYRELPLRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTDNQIMEE-IEGLFD 485 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 I+ G ++ + P E A+ + D Sbjct: 486 FLRAIYGLFGFSF-KLKLSTRPEKYLGKLETWDFAEAQLREALTKFKGAD---------- 534 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY----- 294 I E A Y D+ + D+L + + ++ F +Y Sbjct: 535 ------WEIDEGDGAFYGPKIDI---TISDALKREHQCATIQLDYQLPLNFKLEYMTGEA 585 Query: 295 -----------SLPMSATFKGADGKDHYVQMGSYGIGAMRV---VAAVIESSHDGKGIIW 340 + A + + G G R A+I S GI+ Sbjct: 586 VPKSAAPATSKAEAKPAEGDSNPAQAQPSDSSTPGPGRARPVVIHRAIIGSFERFFGILI 645 Query: 341 PDSVAPFKISLIN----IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 + L I D E++ L +V D G + + Sbjct: 646 EHFGGKWPFWLSPRQILIVPVMASANDYVEELQEILRGDKLNVDIDLSGHTMQKKIRNGQ 705 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED----MSLEEVINYASHRFSNNR 446 L + +VG++ V I++R + + LEE R Sbjct: 706 LAQYNFIFVVGAQEKESRSVNIRNRDDPSSQTKGSLVPLEEARAKLRALRKERR 759 >gi|332821648|ref|XP_003310808.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic [Pan troglodytes] Length = 756 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 147/445 (33%), Gaps = 44/445 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 339 KMLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNALIEFIRSE 396 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + P + +F Sbjct: 397 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEL-FALKPMNCPGHCLMFDH 455 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 456 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 514 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E D Sbjct: 515 FLRTVYSVFGFSFKLN-LSTRPEKFLGDIE-----------------VWDQAEKQLENSL 556 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 557 NEFGEKWELNSGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 605 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 606 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 661 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ + D D G + + A L + ++VG K V Sbjct: 662 --TCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTV 719 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 I+ R + + ++ E I Sbjct: 720 NIRTRDNKVHGERTISETIERLQQL 744 >gi|224283879|ref|ZP_03647201.1| prolyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171] gi|310287860|ref|YP_003939118.1| prolyl-tRNA synthetase [Bifidobacterium bifidum S17] gi|309251796|gb|ADO53544.1| prolyl-tRNA synthetase [Bifidobacterium bifidum S17] Length = 599 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 99/236 (41%), Positives = 143/236 (60%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S FL L+E+P DA+ S KL+LR G + + + GI++WLPLG K L+ + AI+REE + Sbjct: 1 MSTMFLRTLREDPADADTDSAKLLLRAGYVRKAAPGIWTWLPLGLKVLNKIEAIVREEID 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 GA E+ P L + + + R++ YG+ + RL DR++ + PTHEE+ T + + Sbjct: 61 GIGAQEVHFPALLPREPYEATHRWEEYGENLFRLKDRHEADYLLAPTHEEMFTLLVKDMY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG K +Y +Y Sbjct: 121 SSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTIDEEGMKKAYYDERGAYE 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 RIF RL LK +P+ A SGP+GG S EF+ GE + + + + T Sbjct: 181 RIFQRLDLKYVPVFAMSGPMGGSASEEFLAPMAIGEDTFALAPSGKAWNVEALTTP 236 Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 58/234 (24%), Positives = 94/234 (40%), Gaps = 4/234 (1%) Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 A E F + + V T + + D P+ Sbjct: 363 AGVAEPVRFFIDAHVAEGTEWIIGGDEAGKHRFHAVYGRDFKADGTVEAVEVRHGDMSPD 422 Query: 274 N--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 RG+E+G +F G KYS + +GK V MG YGIG RV+A + E+ Sbjct: 423 GSGPLSFERGVEIGQVFQLGLKYSKALDLKVLDQNGKTVPVWMGCYGIGVSRVLACIAET 482 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGS 390 HD +G+ W +V + D DA EK+ A L + G +V +DD + G Sbjct: 483 HHDERGLAW-PAVIAPAQVHVVATGKDAAAFDAAEKLVAELEERGIEVIYDDRKKVSPGV 541 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +F A+L+G PL + G V++ +EI++R + + + + + R Sbjct: 542 KFKDAELIGVPLIAVAGRDTVNNGTIEIRNRDSSDSVAVPVADAAQTLASRLDT 595 >gi|197301753|ref|ZP_03166823.1| hypothetical protein RUMLAC_00479 [Ruminococcus lactaris ATCC 29176] gi|197299193|gb|EDY33723.1| hypothetical protein RUMLAC_00479 [Ruminococcus lactaris ATCC 29176] Length = 655 Score = 206 bits (525), Expect = 5e-51, Method: Composition-based stats. Identities = 73/447 (16%), Positives = 160/447 (35%), Gaps = 37/447 (8%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 +L L++ R D ++ L T + +G+ + P G K + + I + +++ Sbjct: 227 NAYLEKLEDAKRRDHNKLGREMELFTT-VDVIGQGLPLFPPKGTKMIMKLQRWIEDLEDK 285 Query: 64 T-GAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRS 120 G + P + +DL+ SG +D Y + M +++ + P ++++ Sbjct: 286 EWGYVRTRTPLMAKSDLYKISGHWDHYKEGMFVLGDEEKDKEVFALRPMTCPFQYYVYKN 345 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 KSYR+LP+ + FR E G+ R R+F + +A++ + + N + Sbjct: 346 TQKSYRDLPYRMSETSTLFRSEDSGEMHGLTRVRQFTITEAHNVIRPDQAEEELKNCFDL 405 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 +Y + + D+++ + + +D+ + + Sbjct: 406 AY-------------YVLSTLGLQDDVTYRLSKWDPANKKKYLGDEDYWNRTQEALREVL 452 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + A Y D+ + ++ K + I + Sbjct: 453 REKGVPFVEADGEAAFYGPKIDIQAKNVY-----GKEDTMITI------QLDCAIAENFD 501 Query: 300 ATFKGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + +G + +G A + + +P + P ++ ++ I Sbjct: 502 LYYIDQNGDKVRPYIIHRTSMGCYERTLAWLI---EKYAGKFPTWLCPEQVRVLPI---S 555 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + + K+ A L K DV D+ E+IG + A L P ++VG + +D V + Sbjct: 556 EKYEEYANKVCAELKKNDIDVTVDNRSEKIGFKIREARLDKLPYMLVVGQQEEADGTVSV 615 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R G SL+E I+ Sbjct: 616 RSRFAGNEGTKSLDEFIDAICKEIRTK 642 >gi|145348306|ref|XP_001418593.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578823|gb|ABO96886.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 564 Score = 206 bits (525), Expect = 5e-51, Method: Composition-based stats. Identities = 68/429 (15%), Positives = 142/429 (33%), Gaps = 36/429 (8%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD L L + G+ W P G + ++ G + Sbjct: 161 EAKRRDHRTIGKDLGLFSLQQDNAGGGLVFWHPKGAHMRHMIETYWKDLHLARGYELLYS 220 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + +LW SG D Y + M + D+ P + +++ SY++LP Sbjct: 221 PHVARQELWKTSGHSDFYSENMYQPIKVEDEMYQLKPMNCPFHIVVYQDGYYSYKDLPIR 280 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + ++ +R E G+ R R F DA+ F L + + + I G Sbjct: 281 WAELGTVYRYERSGTMHGLFRVRGFTQDDAHIFCLPDQITDE-IKSVLDLTEEILSTFG- 338 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 EF V T + D + + + Sbjct: 339 ----------------FKEFEVNLSTRPEKSVGDDKIWDTAEGALKDALQMKGWDYIVDD 382 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D+ K+ D++ + S ++ F ++ L + K Sbjct: 383 GGGAFYGPKIDI---KILDAIGRKWQCSTVQLD----FNLPERFDLSY---VDRENAKQR 432 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + + G++ ++ + +P +AP ++ L+ + D E + Sbjct: 433 PIMIHRAIFGSLERFFGILT---ENYAGEFPLWLAPIQVRLLPVT---DEVSDYTEGVAK 486 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +L G V G+++ A+ P+ +VG + ++ + ++ G +S Sbjct: 487 KLRDAGVRVEI-CTGQRLAKLVRTAEKAKIPVMAVVGREEAENNTLAVRTFKDGDVGTLS 545 Query: 431 LEEVINYAS 439 ++EV++ + Sbjct: 546 VDEVLSRVT 554 >gi|221056250|ref|XP_002259263.1| threonine--trna ligase [Plasmodium knowlesi strain H] gi|193809334|emb|CAQ40036.1| threonine--trna ligase, putative [Plasmodium knowlesi strain H] Length = 888 Score = 206 bits (525), Expect = 5e-51, Method: Composition-based stats. Identities = 89/481 (18%), Positives = 142/481 (29%), Gaps = 74/481 (15%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E RD KL S G WLP G K + + IR E Sbjct: 419 YLNFLEEAKKRDHRNVGKKLHFF-FFDKDTSPGSCFWLPHGAKIYNKLVDFIRREYRIRM 477 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + S DLW SG Y +Y M + + K P + +F+ SY Sbjct: 478 YDEVITPNVFSCDLWRTSGHYQNYKDCMF-IFNVEQKEWGMKPMNCPGHCIMFKQLNASY 536 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E+ G+ R R F D++ F T + K I Sbjct: 537 RSLPIRLADFGVLHRNEISGSLSGLTRVRRFQQDDSHIFC-TFDQIKEEVLNTLHFIFFI 595 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G K + P + + DF + Sbjct: 596 YDLFGFKYELF-LSTRP-----------------KKFIGNISTWDFAEQGLKDALNSANI 637 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTKYSLPMSATF 302 I E A Y D+ L DS+ + ++ F K + Sbjct: 638 SWKINEGDGAFYGPKIDIL---LRDSINRTHQCGTIQLDFQLPCRFNLQYKNKDFGALNE 694 Query: 303 KG---------------------------------------ADGKDHYVQMGSYGIGAMR 323 G D V + +G++ Sbjct: 695 GDNAESGTMKREEVAEKGEGNQPSQNKGSDTNLPTDTAEQLKKGFDRPVIIHRAILGSVE 754 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 A++ GK W + D +Y L+ DV D Sbjct: 755 RFVAILIEHTAGKLPFW------ISPRQAIVLPVSDKFNDYANYVYQTLNNHFFDVEIDT 808 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM-SLEEVINYASHRF 442 + + A L F ++VG K ++ + V +++R ++ SLEE+I Sbjct: 809 SLNTLNKKIREAQLNQFNFILVVGEKELTTNTVTVRNRDDQNNHEVCSLEELIARFRKLL 868 Query: 443 S 443 Sbjct: 869 D 869 >gi|33519754|ref|NP_878586.1| prolyl-tRNA synthetase [Candidatus Blochmannia floridanus] gi|81836111|sp|Q7VRC8|SYP_BLOFL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|33504099|emb|CAD83360.1| prolyl-tRNA synthetase [Candidatus Blochmannia floridanus] Length = 581 Score = 206 bits (525), Expect = 5e-51, Method: Composition-based stats. Identities = 105/266 (39%), Positives = 159/266 (59%), Gaps = 2/266 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++Y L ++E P+ E SH+LMLR+GM+ Q S G+Y+WLP G + L + II EE Sbjct: 1 MRTTQYLLATIKEIPKSCEPISHQLMLRSGMVRQISSGVYTWLPTGLRVLKKIENIIHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ G +E+ +P Q A+LW +SGR+ YG E+LR +R ++ + GPTHEE++TD+ + Sbjct: 61 MNKIGFLEIFMPITQPANLWKQSGRWSEYGLELLRFKNRTNQKFVLGPTHEEMITDLVCN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I S++ P YQI K+RDE RP+FGV+RS+EF+MKD YSF + + + +Y ++ Sbjct: 121 EILSHKQFPIKLYQINTKYRDEARPQFGVIRSKEFIMKDGYSFHIHQKSLEDTYYNIYQQ 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA--DTGETQVFCSKDFMDFPIPSENTD 238 Y IF R+GLK ++A+ G IGG +SHEF ET +F D + + Sbjct: 181 YHIIFKRIGLKFCVVQADPGNIGGIVSHEFQAYYNNTQNETAIFTETFNKDMSNINTRKN 240 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHN 264 D +I+ I+ ++D HN Sbjct: 241 NDIVINNIHILNTIQTIKLTSADFHN 266 Score = 126 bits (316), Expect = 8e-27, Method: Composition-based stats. Identities = 63/189 (33%), Positives = 104/189 (55%), Gaps = 4/189 (2%) Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIG 320 + + +K+ + IE+GHIF G KYS +++ + + + + MG YGIG Sbjct: 393 ESNIKKINTNQIRKLLPIRNTIEIGHIFQLGKKYSNCINSCIQKKNKDNLNITMGCYGIG 452 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD-QVCRDACEKIYARLSKV---G 376 R+V VIE HD GIIWP+ +APFK+++I I + ++ E++Y +LS + G Sbjct: 453 ITRIVPMVIEQHHDKHGIIWPNEIAPFKLAIIPINMYRFINVQNTAEELYTQLSSIPVIG 512 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D+ DD E G F DLLG P +I+ + +++ +VE K+R TGI + + L +I Sbjct: 513 FDILLDDRKENPGIMFTDIDLLGIPHILIISERNLNNQEVEYKYRKTGIIQKIKLNLIIQ 572 Query: 437 YASHRFSNN 445 + + + NN Sbjct: 573 FLTEKLMNN 581 >gi|90424612|ref|YP_532982.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris BisB18] gi|90106626|gb|ABD88663.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris BisB18] Length = 679 Score = 206 bits (525), Expect = 5e-51, Method: Composition-based stats. Identities = 80/443 (18%), Positives = 139/443 (31%), Gaps = 39/443 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y I + RD +L L + G+ W G + A +R Sbjct: 256 YLKQIEEAEKRDHRKLGRELDLF--HFQEEGPGVVFWHAKGWTIFQALIAYMRRRL-SGD 312 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-----KAMIYGPTHEEVMTDIFRS 120 E++ P + LW SG ++ Y + M D + P + IF+ Sbjct: 313 YDEVNAPQILDKALWEISGHWEWYRENMFAAQSAGDEAEDKRWFALKPMNCPGHVQIFKH 372 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +KSYR+LP + + R E G+MR R F DA+ F + ++ Sbjct: 373 GLKSYRDLPLRMAEFGIVHRYEPSGAMHGLMRVRGFTQDDAHVFCTEAQLAEECLKIN-E 431 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 L + G I ++ + P + E A+ V +E Sbjct: 432 LILSTYSDFGFGDIVVKLSTRPEKRVGTDEMWDHAERVMATVL-----------AEIEAA 480 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 SI A Y + L D++ + + ++ FG Sbjct: 481 SGGRIKTSINPGEGAFYGPKFEY---VLRDAIGRDWQCGTTQVDFNLPERFG-------- 529 Query: 300 ATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 A + ADG V + G+M ++ G +W V ++ Sbjct: 530 AFYIDADGSKKAPVMVHRAICGSMERFIGILIEHFAGSFPLWLAPVQVVVTTIT------ 583 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D + + A + G V D E+I + L P ++VG K +V + Sbjct: 584 SEGDDYAKVVAAAARRAGLRVELDLRNEKINYKVREHSLAKIPAMLVVGKKEAESHQVSV 643 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + + + + E I Sbjct: 644 RRLGSEGQTVLPTNEAIAALVEE 666 >gi|194374367|dbj|BAG57079.1| unnamed protein product [Homo sapiens] Length = 756 Score = 206 bits (525), Expect = 5e-51, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 147/445 (33%), Gaps = 44/445 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 339 KMLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNALIEFIRSE 396 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + P + +F Sbjct: 397 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEL-FALKPMNCPGHCLMFDH 455 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 456 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 514 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E D Sbjct: 515 FLRTVYSVFGFSFKLN-LSTRPEKFLGDIE-----------------VWDQAEKQLENSL 556 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 557 NEFGEKWELNSGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 605 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 606 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 661 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ + D D G + + A L + ++VG K V Sbjct: 662 --TCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTV 719 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 I+ R + + ++ E I Sbjct: 720 NIRTRDNKVHGERTISETIERLQQL 744 >gi|227833256|ref|YP_002834963.1| Threonyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] gi|262184240|ref|ZP_06043661.1| threonyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] gi|254783518|sp|C3PGS1|SYT_CORA7 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|227454272|gb|ACP33025.1| Threonyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] Length = 687 Score = 206 bits (525), Expect = 5e-51, Method: Composition-based stats. Identities = 67/448 (14%), Positives = 131/448 (29%), Gaps = 47/448 (10%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD +L L + + G + P G + R G +S Sbjct: 260 EEAEKRDHRRLGAELDLFS-FPDEIGSGFPVFHPNGATVRMEMEEHSRRRHIADGYSFVS 318 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRND------------KAMIYGPTHEEVMTDIF 118 P L DL+ +SG D Y M + + P + + IF Sbjct: 319 TPHLTKGDLFKKSGHLDFYADGMFPPMQLDGEWDADGYCTKQPQDYYAKPMNCPMHNLIF 378 Query: 119 RSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 S +SYR LP ++ +R E G+ R+R F D++ + TPE + K+ Sbjct: 379 ASRGRSYRELPLRLFEFGTVYRYEKSGVIHGLTRARGFTQDDSHIYC-TPEQLEEELTKV 437 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 + + GL + + + S + + + Sbjct: 438 LEFIISLLKDYGLDDFYLELST----------------KDPNKYVGSDEIWERSTAILQS 481 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 + A Y + + D++ ++S ++ F ++ L Sbjct: 482 VAEKSGLELVPDPAGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FNLPERFELE 534 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 +A+ K + + G++ V+ + G W I + Sbjct: 535 YTAS---DGSKQRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVVGIPVA----- 586 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 EK+ A L G D +++ + P ++ G + V V Sbjct: 587 -DTFAPHLEKVCAELRSRGLRADVDTSDDRMQKKIRNHTTGKVPFMLLAGERDVEADAVS 645 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 + + +E +N Sbjct: 646 FRFLDGTQVNGVPVEAAVNVIEAWVRER 673 >gi|162452628|ref|YP_001614995.1| hypothetical protein sce4352 [Sorangium cellulosum 'So ce 56'] gi|161163210|emb|CAN94515.1| thrS [Sorangium cellulosum 'So ce 56'] Length = 753 Score = 206 bits (525), Expect = 5e-51, Method: Composition-based stats. Identities = 68/414 (16%), Positives = 130/414 (31%), Gaps = 39/414 (9%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 + + G+ WLP G + R+ G + P + ADLW SG +D Y Sbjct: 369 FVEEIGAGLVMWLPKGGLLRTIIEDQWRKMHLEEGYDIVYSPHIAKADLWKTSGHWDFYR 428 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGV 149 + M + P + + +S +SYR P ++ +R E G+ Sbjct: 429 EGMFSPMSVDGHDYCCKPMNCPFHILMVKSRTRSYREFPMRLAELGTVYRYEAAGVMHGL 488 Query: 150 MRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE 209 MR R F DA+ F + + +++ L++ G + + + P E Sbjct: 489 MRVRGFTQDDAHLFCRADQVEQE-IHRVLRFILKMLRTFGFEQFDINLSTRPEKYVGGLE 547 Query: 210 FIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFD 269 A++ + + ++ A Y D+ KL D Sbjct: 548 DWAKAES-----------------TLAGALKALGLEYTVDPGGGAFYGPKIDI---KLVD 587 Query: 270 SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI--GAMRVVAA 327 +L + S + + + F A G+ M + R + Sbjct: 588 ALDRRWQCSTLQYDFNNP--------ERFTLGFVNAKGELEQPIMLHRALLGSIERFIGV 639 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++E A D E++ L G + E+ Sbjct: 640 LLEHHAGALPAWLSPEQARVVTV-------SDKHNDHAEQVTQALRAHGIRASFVRSSEK 692 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 +G++ A + P +++G K V ++ R R M E + + + Sbjct: 693 LGAKIREAQVEKIPHMLVIGDKEVEAKGATVRLRDGSDRGFMKTEALAEFLREQ 746 >gi|224419073|ref|ZP_03657079.1| prolyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|313142583|ref|ZP_07804776.1| prolyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|313131614|gb|EFR49231.1| prolyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] Length = 573 Score = 206 bits (525), Expect = 5e-51, Method: Composition-based stats. Identities = 108/258 (41%), Positives = 153/258 (59%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK+F+P +E P+D + SH+ +LR G I Q GIY++LPLG+K LD ++ I++ + Sbjct: 1 MRFSKFFIPTFKEVPKDVILKSHEYLLRGGFIQQIGSGIYNFLPLGKKVLDKISRIVKNK 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ + + A LW SGRYD YGKE+LR DR + ++GPTHEE +T++ ++ Sbjct: 61 MDEAGANEVLLGCVTPASLWQASGRYDRYGKELLRFKDRKENEFVFGPTHEETITELAKT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ LP FYQIQ KFRDE+RPRFG+MR REF+MKD YSF E K ++ M + Sbjct: 121 YIKSYKQLPLHFYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHSNYEDLKREFDVMEKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF LGL + A+SG IGG S EF+VLA++GE + Sbjct: 181 YSAIFLELGLDFRAVEADSGAIGGSGSKEFMVLAESGEDTICVCDSCSYAANLEAANRLP 240 Query: 241 DIISLNSIVEQWTAPYAA 258 + + + Sbjct: 241 KMPLTTPPEANFAKFHTP 258 Score = 157 bits (396), Expect = 5e-36, Method: Composition-based stats. Identities = 63/180 (35%), Positives = 94/180 (52%), Gaps = 1/180 (0%) Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIG 320 +V + K +GIEVGHIF G KYS M ATF +GK MG YGIG Sbjct: 393 EVKEGDYCKECHKGKLYFTKGIEVGHIFQLGEKYSQAMEATFLDEEGKAKPFVMGCYGIG 452 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 R++AA+IE +HD KG+ W + APF + ++ D+ + EKIY LS G + Sbjct: 453 ISRLLAAIIEQNHDEKGMKWTATTAPFLLDIVVSNIKDENQSELAEKIYHALSANGIECL 512 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 DD E+ G++ A +L+G P +IVG K V + K+E+ R + ++ + + + Sbjct: 513 LDDRKERYGAKMADFELIGIPYALIVG-KGVEEGKIELVCRKNLEKINLEIADFESLIEK 571 >gi|25028341|ref|NP_738395.1| threonyl-tRNA synthetase [Corynebacterium efficiens YS-314] gi|23493626|dbj|BAC18595.1| putative threonyl-tRNA synthetase [Corynebacterium efficiens YS-314] Length = 720 Score = 206 bits (525), Expect = 5e-51, Method: Composition-based stats. Identities = 60/458 (13%), Positives = 133/458 (29%), Gaps = 49/458 (10%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + +Y + + RD +L L + + G+ + P G + R Sbjct: 284 KLDEYQTMLAEAEKRDHRRLGTELDLFS-FPDEIGSGLPVFHPNGAIVRLEMEEHSRRRH 342 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL------------ADRNDKAMIYGPT 109 + G ++ P +DL+ +SG Y + M + + P Sbjct: 343 IQAGYSFVNTPHATKSDLFEKSGHLGFYKEGMFPPLQLDAEYDAEGNQTKPGQDYYLKPM 402 Query: 110 HEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPE 168 + + IF S +SYR LP ++ +R E G+ R+R F DA+ + T + Sbjct: 403 NCPMHNLIFDSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYC-TED 461 Query: 169 GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFM 228 + + + + GL + + + + Sbjct: 462 QLEEELTSVLEFIISLLKDYGLDDFYLELST----------------KDPKKFVGDDEIW 505 Query: 229 DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIF 288 + + + A Y + + D++ ++S ++ F Sbjct: 506 ERSTEILQRVATNSGLDLVPDPEGAAFYGPKI---SVQAKDAIGRTWQMSTVQLD----F 558 Query: 289 YFGTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 ++ + DG + G++ V+ + G W Sbjct: 559 NLPERF----ELEYTSPDGSKQRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVV 614 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 I + + EK+ +L G D +++ + P ++ G Sbjct: 615 GIPVA------EDFIPHLEKVVDKLRARGFRAEVDTSDDRMQKKIRTHTTGKIPFMLLAG 668 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 + V V + + ++E + S Sbjct: 669 GRDVEADAVSFRFLDGTQVNGVPVDEAVELISTWILER 706 >gi|253828011|ref|ZP_04870896.1| prolyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|253511417|gb|EES90076.1| prolyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] Length = 578 Score = 206 bits (525), Expect = 5e-51, Method: Composition-based stats. Identities = 108/258 (41%), Positives = 153/258 (59%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK+F+P +E P+D + SH+ +LR G I Q GIY++LPLG+K LD ++ I++ + Sbjct: 1 MRFSKFFIPTFKEVPKDVILKSHEYLLRGGFIQQIGSGIYNFLPLGKKVLDKISRIVKNK 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ + + A LW SGRYD YGKE+LR DR + ++GPTHEE +T++ ++ Sbjct: 61 MDEAGANEVLLGCVTPASLWQASGRYDRYGKELLRFKDRKENEFVFGPTHEETITELAKT 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ LP FYQIQ KFRDE+RPRFG+MR REF+MKD YSF E K ++ M + Sbjct: 121 YIKSYKQLPLHFYQIQTKFRDEIRPRFGLMRGREFIMKDGYSFHSNYEDLKREFDVMEKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF LGL + A+SG IGG S EF+VLA++GE + Sbjct: 181 YSAIFLELGLDFRAVEADSGAIGGSGSKEFMVLAESGEDTICVCDSCSYAANLEAANRLP 240 Query: 241 DIISLNSIVEQWTAPYAA 258 + + + Sbjct: 241 KMPLTTPPEANFAKFHTP 258 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 64/184 (34%), Positives = 95/184 (51%), Gaps = 1/184 (0%) Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIG 320 +V + K +GIEVGHIF G KYS M ATF +GK MG YGIG Sbjct: 393 EVKEGDYCKECHKGKLYFTKGIEVGHIFQLGEKYSQAMEATFLDEEGKAKPFVMGCYGIG 452 Query: 321 AMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 R++AA+IE +HD KG+ W + APF + ++ D+ + EKIY LS G + Sbjct: 453 ISRLLAAIIEQNHDEKGMKWTATTAPFLLDIVVSNIKDENQSELAEKIYHALSANGIECL 512 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 DD E+ G++ A +L+G P +IVG K V + K+E+ R + ++ + + + Sbjct: 513 LDDRKERYGAKMADFELIGIPYALIVG-KGVEEGKIELVCRKNLEKINLEIADFESLIEK 571 Query: 441 RFSN 444 N Sbjct: 572 IKQN 575 >gi|319956647|ref|YP_004167910.1| prolyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511] gi|319419051|gb|ADV46161.1| prolyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511] Length = 571 Score = 206 bits (525), Expect = 5e-51, Method: Composition-based stats. Identities = 108/235 (45%), Positives = 150/235 (63%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK +P +E P DA + SH +LR G I G+Y++LPLG+++LD V +++EE Sbjct: 1 MRFSKLLIPTAKEAPSDAVLPSHIYLLRAGFIQSVGAGLYNFLPLGKRSLDRVRQVVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ + + A+LW ESGR++ YGKE+LR DR + + GPTHEE+M ++ R Sbjct: 61 LDAAGCQEVDLAFVTPAELWRESGRFEKYGKELLRFTDRKENEFVLGPTHEEMMVNLVRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQI+ KFRDE+RPRFG+MR REFLM+D YSF E K ++ M + Sbjct: 121 SVKSYKQLPLHLYQIKTKFRDEIRPRFGLMRGREFLMEDGYSFHKDEEDMKREFDHMEAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y RIF RLGL + A+SG IGG S EF+VLAD+GE + + D+ E Sbjct: 181 YSRIFTRLGLDFRVVEADSGAIGGSGSKEFMVLADSGEDTIVVCEGC-DYGANIE 234 Score = 159 bits (403), Expect = 7e-37, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 105/208 (50%), Gaps = 2/208 (0%) Query: 235 ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY 294 + +D + V + +A V + +GIEVGHIF GT+Y Sbjct: 366 MGANKEDYHLIGVTVPDYGDFFADLVAVQEGDRCAKCG-GRLHYTKGIEVGHIFQLGTRY 424 Query: 295 SLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 S P++ATF +GK MG+YGIG R++AA+IE HD +G IW APF + +I Sbjct: 425 SEPLNATFLDENGKRRPFVMGTYGIGVSRLLAAIIEQHHDDRGCIWTRESAPFDVEIIVS 484 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 + R+A E++Y L G +V DD E+ G + +L+G PL ++VG K ++D Sbjct: 485 NIANDAEREAAEELYRLLKSKGVEVLLDDRKERFGFKMKDFELIGIPLGIVVGKK-LADG 543 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRF 442 +VE+ R R D+ LE V + R Sbjct: 544 QVELIVRDGLERIDLPLERVADEVLERV 571 >gi|50306435|ref|XP_453191.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49642325|emb|CAH00287.1| KLLA0D02772p [Kluyveromyces lactis] Length = 461 Score = 206 bits (525), Expect = 5e-51, Method: Composition-based stats. Identities = 74/448 (16%), Positives = 153/448 (34%), Gaps = 48/448 (10%) Query: 18 AEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIR-EEQNRTGAIEMSVPTLQ 75 E+++ + + I S G +LP G K + + + ++ ++QN+ G E+ P + Sbjct: 43 HEVSTKQEL----YITDPISPGSIFFLPNGTKIFNKLVSFMKLQQQNKYGFQEVVTPLIY 98 Query: 76 SADLWVESGRYDSYGKEMLRLA--DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 LW +SG +++Y +M R+ D + + P + +F+ +SY LP F Sbjct: 99 RKTLWEQSGHWENYKDDMFRVEGNDVSKEEYGLKPMNCPGHCVVFKRFDRSYNELPLRFS 158 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 R+E G+ R R+F D + F + + K + ++ S Sbjct: 159 DFSPLHRNEASGALSGLTRVRKFHQDDGHIFCTPDQVRQE-IQKCLELVDMCYTKVFPIS 217 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 + + + E + + D + E Sbjct: 218 GDSKQAAYSLTLSTRPE----------KYVGDIEVWDHAEDVLKDTLQSWGQPWTTNEGD 267 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + D ++ +V+ ++ F ++ FK D Sbjct: 268 GAFYGPKIDIL---VNDHTGKSHQVATIQLD----FQLPERFD----LQFKDKDNSYKRP 316 Query: 313 -QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 + G++ A++ D WP + P + +I +K D+ + K Sbjct: 317 IMIHRAVFGSVERFMAILI---DSSKGKWPFWLNPNQCMVIPVKTEDEKIMELAFKTVNS 373 Query: 372 LSKVG-------------CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 L V D E + + A + +++G K V KV I Sbjct: 374 LRGENSDPKSPIPLNSFHFSVDMDARDESVSKRIREAIKKHYSYIIMIGDKEVEAGKVAI 433 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNNR 446 + R + + +++++V N + Sbjct: 434 RTRESKKVDLLTIDDVFERFVDLEKNYK 461 >gi|183982102|ref|YP_001850393.1| threonyl-tRNA synthetase ThrS [Mycobacterium marinum M] gi|238690929|sp|B2HM74|SYT_MYCMM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|183175428|gb|ACC40538.1| threonyl-tRNA synthetase ThrS [Mycobacterium marinum M] Length = 691 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 67/450 (14%), Positives = 130/450 (28%), Gaps = 49/450 (10%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 I + RD +L L + + G+ + P G + R + G + Sbjct: 261 IEEAQRRDHRKLGVELDLFS-FPDEIGSGLAVFHPKGGIVRRELEDYSRRKHTEAGYQFV 319 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDI 117 + P + A L+ SG D Y M + + P + + I Sbjct: 320 NSPHITKAQLFHTSGHLDWYADGMFPPMQIDAEYNADGTVRKPGQDYYLKPMNCPMHCLI 379 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 FR+ +SYR LP ++ +R E G+ R R M DA+ F + Sbjct: 380 FRARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDAHIFCTREQMRDEL-RS 438 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + L + GL + + + S + + Sbjct: 439 LLRFVLDLLSDYGLTDFYLELST----------------KDPDKFVGSDEVWEEATNVLA 482 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + A Y + ++ D+L ++S ++ F F ++ Sbjct: 483 EVGAESGLELVPDPGGAAFYGPKI---SVQVKDALGRTWQMSTIQLD----FNFPERF-- 533 Query: 297 PMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 + ADG + G++ ++ + G W V I + Sbjct: 534 --GLEYTAADGTRQRPVMIHRALFGSIERFFGILTEHYAGAFPAWLAPVQAVGIPVA--- 588 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 E++ A+L G V D +++ + P ++ G + V Sbjct: 589 ---DEHVAYLEQVAAQLKSHGVRVEVDTSDDRMAKKIVHHTNQKVPFMLLAGDRDVQADA 645 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + + E + S Sbjct: 646 VSFRFGDRTQINGVPREAAVAAIVDWISRR 675 >gi|50959620|gb|AAH74887.1| TARSL2 protein [Homo sapiens] Length = 441 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 74/447 (16%), Positives = 150/447 (33%), Gaps = 40/447 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + + + +E RD + L H S G +LP G + + IREE Sbjct: 24 KMMRDWEKFQEEAKNRDHRKIGKEQELF--FFHDLSPGSCFFLPRGAFIYNTLTDFIREE 81 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ E+ P + ++ LW SG + Y + M D P + +F Sbjct: 82 YHKRDFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIEKDT-FALKPMNCPGHCLMFAH 140 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R +P F + R+EL G+ R R F DA+ F + + Sbjct: 141 RPRSWREMPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQ-IEEEIKGCLQ 199 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G F + T + + Sbjct: 200 FLQSVYSTFGFS------------------FQLNLSTRPENFLGEIEMWNEAEKQLQNSL 241 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D + A Y D+ K+ D++ + + ++ F +++L Sbjct: 242 MDFGEPWKMNPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRFNLTYV 294 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K V + +G++ + A++ + G WP ++P ++ +I + Sbjct: 295 SK--DGDDKKRPVIIHRAILGSVERMIAILS---ENYGGKWPFWLSPRQVMVIPVGP--- 346 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C ++ + + G D D + + A L + ++VG K D+ V + Sbjct: 347 TCEKYALQVSSEFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNV 406 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R I ++ + I+ + Sbjct: 407 RTRDNKIHGEILVTSAIDKLKNLRKTR 433 >gi|29829100|ref|NP_823734.1| prolyl-tRNA synthetase [Streptomyces avermitilis MA-4680] gi|81838439|sp|Q82K46|SYP1_STRAW RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA ligase 1; Short=ProRS 1 gi|29606206|dbj|BAC70269.1| putative prolyl-tRNA synthetase [Streptomyces avermitilis MA-4680] Length = 564 Score = 206 bits (524), Expect = 6e-51, Method: Composition-based stats. Identities = 104/263 (39%), Positives = 151/263 (57%), Gaps = 4/263 (1%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+ + L+++P DAE +HKL++R + + + GI+SWLPLG+K L+NV ++REE Sbjct: 6 RMSRLMVKTLRDDPADAETLNHKLLVRADYVRRTAAGIWSWLPLGKKVLENVARVVREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G E+ +P L + + +GR++ YG E+ RL DR + GPTHEE+ T + + Sbjct: 66 DAMGGQEVLLPALLPKEPYEATGRWEEYGPELFRLKDRKGAEYLLGPTHEEIFTQLVKDQ 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP YQIQ K+RDE RPR G++R REFLMKD+YSFD EG SY +Y Sbjct: 126 CSSYKDLPVILYQIQAKYRDEARPRAGILRGREFLMKDSYSFDTADEGLAQSYALHREAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++IF+RLGL + A SG +GG S EF+ A GE F D+ +E F Sbjct: 186 IKIFNRLGLDHRIVSAVSGAMGGSASEEFLAPAPAGE-DTFVDCPACDYAANTEAVTFVA 244 Query: 242 II---SLNSIVEQWTAPYAATSD 261 + VE+ P T + Sbjct: 245 PAVESVEHPAVEELDTPDTPTIE 267 Score = 136 bits (343), Expect = 6e-30, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 86/177 (48%), Gaps = 6/177 (3%) Query: 266 KLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 + D P R IE+GHIF G KY+ G +GK V MGSYGIG R Sbjct: 390 EEGDPCPSCGTGLRLDRAIEIGHIFQLGRKYADAFQLDVLGKEGKPVRVTMGSYGIGVSR 449 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 VAA+ E + D +G+ WP +AP + + A + + + +L G V DD Sbjct: 450 AVAALAEQTADEQGLCWPKEIAPADVH--VVAAGKALQTELALDVAEKLGAAGVRVLVDD 507 Query: 384 M-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYAS 439 G G +F A+L+G P ++ G + +E+K R TG RE++++EE I S Sbjct: 508 RAGVSPGVKFTDAELIGVPQILVAGRRSAE-GVLELKDRKTGEREELTVEEAIARLS 563 >gi|315122407|ref|YP_004062896.1| threonyl-tRNA synthetase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495809|gb|ADR52408.1| threonyl-tRNA synthetase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 653 Score = 206 bits (524), Expect = 6e-51, Method: Composition-based stats. Identities = 69/445 (15%), Positives = 153/445 (34%), Gaps = 37/445 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y I++ RD + ++ L + G+ W G K + + +R + Sbjct: 231 LTQYLDFIVESEKRDHRKIAREMDLF--HTAEDGSGVIFWHQKGWKTFQTLISYMRRKI- 287 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-----KAMIYGPTHEEVMTDI 117 + E++ P + +LW +SG +D Y M + ++ ++ P + +I Sbjct: 288 KDDYEEINTPQVLDQNLWKQSGHWDWYRANMFAVQCADETIKDLRSFALKPMNCPGHVEI 347 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 F+ +KSYR LP + +R+E G+MR R F DA+ F + + Sbjct: 348 FKHGLKSYRELPVRLAEFGSVYRNEPSGSLHGLMRVRGFTQDDAHVFCTKEQMFEECLKI 407 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + I+ G ++I ++ + P S A++ V + Sbjct: 408 H-NLIVSIYKDFGFENITVKLSTRPEKRVGSDALWDDAESIMQTVLNTIKTSSQS----- 461 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 I+ A Y + L D++ + I+ F Sbjct: 462 ------KINTGILPGEGAFYGPKFEYI---LKDAIGREWQCGTTQIDFNLPHRF------ 506 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 +A + + + + M + + I + P ++P + + I + Sbjct: 507 --NAFYINSQSEKCHPVMIHRAV--FGSIERFIGIMIENFKGHLPLWLSPVQAVVTTITS 562 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + +++ A L + D E+I + PL +I G K + + Sbjct: 563 SS---IEYAQEVTALLKSNDLSIETDFRNEKINYKIREHSSKKIPLIIICGDKETQERSI 619 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 I+ + + +++ + + + Sbjct: 620 VIRRLGSKTSQSLNILDAVQMITQE 644 >gi|196012975|ref|XP_002116349.1| hypothetical protein TRIADDRAFT_50865 [Trichoplax adhaerens] gi|190580940|gb|EDV21019.1| hypothetical protein TRIADDRAFT_50865 [Trichoplax adhaerens] Length = 680 Score = 206 bits (524), Expect = 6e-51, Method: Composition-based stats. Identities = 79/440 (17%), Positives = 160/440 (36%), Gaps = 44/440 (10%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD L + S G +LP G + ++R++ + G E+ Sbjct: 275 EEAAKRDHRKIGRDQELF--FFSELSPGSCFFLPRGAHIYGILMQLMRDQYRKRGFHEVL 332 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + S+ LW+ SG + Y +M D P + +F +S+R LP Sbjct: 333 SPNIYSSKLWMTSGHWQHYKDDMFTF-DVEKDQFGLKPMNCPGHCVMFSHRPRSWRELPL 391 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + + + R+EL G+ R R F DA+ F + I+ LG Sbjct: 392 RYAEFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCRDDQVKDE-IKGCLDFLKYIYDTLG 450 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + + + P EF+ D D+ + Sbjct: 451 FQ-LKLFLSTRP------DEFM-----------GEIATWDRAEQQLRESLDEFGLKWGLK 492 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 E+ A Y D+ ++ D+L + + ++ F T++ + T+ G +G D Sbjct: 493 EKDGAFYGPKIDI---QVLDALRRPHQCATIQLD----FQLPTRF----NLTYVGKNGDD 541 Query: 310 --HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 V + +G++ + AV+ + WP ++P + +I + A + + Sbjct: 542 TLRPVIIHRAILGSVERMIAVL---CENFAGKWPFWLSPRQAMVIPVAAK---FDEYALQ 595 Query: 368 IYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR 426 + +L G V D G+ + + A L + ++VG K + V ++ R + Sbjct: 596 VRDQLHSAGFYVDVDLAPGDTMNKKVRNAQLAQYNFSMVVGQKECENKSVNVRSRNNQVY 655 Query: 427 EDMSLEEVINYASHRFSNNR 446 + ++ +VI + ++ Sbjct: 656 GEQTIVKVIERF-EELNKSK 674 >gi|255710799|ref|XP_002551683.1| KLTH0A05192p [Lachancea thermotolerans] gi|238933060|emb|CAR21241.1| KLTH0A05192p [Lachancea thermotolerans] Length = 740 Score = 206 bits (524), Expect = 6e-51, Method: Composition-based stats. Identities = 69/441 (15%), Positives = 156/441 (35%), Gaps = 41/441 (9%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + + RD + L ++ S G WLP G + +N+ ++R E + G E+ Sbjct: 329 EASMRDHRKIGREQELF--YFNEMSPGSCFWLPHGTRIYNNLVDLMRAEYRKRGFDEVIT 386 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + ++ LW SG + +Y + M + P + +F+S +SY+ LP+ Sbjct: 387 PNMYNSKLWETSGHWGNYKENMFTFEVEKET-FGLKPMNCPGHCILFKSRERSYKELPWR 445 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + R+E G+ R R F DA+ F + F ++ G Sbjct: 446 VADFGVIHRNEFSGALTGLTRVRRFQQDDAHIFCA-QNQIEQEIENCFSFLQYVYGVFG- 503 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 EF + T + + + + + Sbjct: 504 -----------------FEFKMELSTRPEKFVGEIETWNNAEAKLESALRKWGGNWELNP 546 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD-GKD 309 A Y D+ K+ D+L + + ++ F ++ L + + + Sbjct: 547 GDGAFYGPKIDI---KISDALRRWHQCATIQLD----FQLPNRFELEFKSKDNQENENYE 599 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + +G++ + A++ + WP ++P ++ ++ + ++ +++ Sbjct: 600 RPVMIHRAILGSVERMTAILT---EHFAGKWPFWLSPRQVLVVPVGVK---YQEYAQEVR 653 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE-- 427 +L + D G + + +L + IVG + +++ V I++R ++ Sbjct: 654 DKLCEQDFYADVDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMTEKSVNIRNRDVIEQQGK 713 Query: 428 --DMSLEEVINYASHRFSNNR 446 ++ E V+ R Sbjct: 714 NATIAFETVLQQLKKLKEEKR 734 >gi|197294184|ref|YP_001798725.1| threonyl-tRNA synthetase [Candidatus Phytoplasma australiense] gi|226701405|sp|B1V8W6|SYT_PHYAS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|171853511|emb|CAM11353.1| Threonyl-tRNA synthetase [Candidatus Phytoplasma australiense] Length = 641 Score = 206 bits (524), Expect = 6e-51, Method: Composition-based stats. Identities = 66/445 (14%), Positives = 146/445 (32%), Gaps = 37/445 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +L+E RD + + KL L + G+ WLP G V I +++ Sbjct: 229 YLKLLEERKERDHKRLNKKLDLFM-FSQEVGLGLPFWLPKGATLRRIVERYIVDKELSHQ 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHIKS 124 + P + + +L+ SG + Y + M + +K ++ P + I++ +S Sbjct: 288 YHHVYTPIMANVELYRTSGHLEHYSQNMFPVMQLENKEKIVLRPMNCPHHMMIYKKSPRS 347 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 Y+ LP ++ + R E ++ + + + P+ + K+ L + Sbjct: 348 YKELPLRIAELGMMHRFEKSGAVSGLQRVREMNLNDAHNFVRPDQIEEEIKKIINLILEV 407 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMD-FPIPSENTDFDDII 243 + + R D + + + D M ++ Sbjct: 408 YRDFKITKYEFRLS--------------YRDPQDKEKYFPDDNMWQHAENILKKTIQELN 453 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 A Y DV ++ +L + +S ++ F K+ TF Sbjct: 454 LPFREAIGDAAFYGPKLDV---QVLTALGNEETLSTIQLD----FLLPQKFD----LTFI 502 Query: 304 GADGKDHYVQMGSYGIGAM--RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 A+ K + I + R ++ +IE + + ++ Sbjct: 503 DANNKHCRPVVIHRAIVSTLERFLSHLIEENKGVFPLWLAPVQILLIPVSSSVNLK---- 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 ++I L G + +G + A L P Q++VG ++ + + + Sbjct: 559 --YTQEIKELLLSQGLRAEINSKEATLGYKIREAQELKIPYQIVVGDNEIAKNLITFRKY 616 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + ++E I+ + R Sbjct: 617 GQKNQTTTNIETFISSLNQEIMEKR 641 >gi|167589762|ref|ZP_02382150.1| tRNA synthetase, class II (G, H, P and S) [Burkholderia ubonensis Bu] Length = 406 Score = 206 bits (524), Expect = 6e-51, Method: Composition-based stats. Identities = 78/428 (18%), Positives = 134/428 (31%), Gaps = 41/428 (9%) Query: 17 DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS 76 D + +KL L S G W P G V IRE + G E+ P + S Sbjct: 5 DHRVLGNKLDLF--HQQDESPGAVFWHPRGMALYRVVEEYIRERMRQAGFAEVRTPQIAS 62 Query: 77 ADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 LW +SG ++ +G+ M L D + + P +F+ +SYR+LP + + Sbjct: 63 RALWEQSGHWEKFGRNMFSL-DSDGQPFCLKPMSCPCHVQVFKRGSRSYRDLPVRYSEFG 121 Query: 137 LKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 R E G+MR+R F DA+ + + + + I+ G + Sbjct: 122 AVHRAEPSGSLHGLMRARAFTQDDAHVLCM-EDQVEAEVARFCRLLKTIYADFGFDRFDV 180 Query: 196 RAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP 255 + P D I + A Sbjct: 181 ALSTRPSVR-----------------AGDDALWDRSESMLALAARSAGLHFEIQQGEGAF 223 Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD-HYVQM 314 Y + H L D + ++ G AT+ G V + Sbjct: 224 YGPKLEFH---LLDRQGRKWQCGTIQLDFVLPERLG--------ATYVSESGAKATPVML 272 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 +G++ ++ H+G W ++ R + Sbjct: 273 HHAVLGSLERFIGILLEHHEGWLPTWLAPDQIVVANIG------DEARPFADSAALAFET 326 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +GC V D E++ + A L P+ + G K V ++ R G R +S+ + Sbjct: 327 IGCRVLRDFRPERLPRKIFDARELAAPIFAVAGPKEAQSGAVSLRLR-NGERHALSIGDA 385 Query: 435 INYASHRF 442 + Y R Sbjct: 386 LAYLEKRV 393 >gi|326477787|gb|EGE01797.1| threonyl-tRNA synthetase [Trichophyton equinum CBS 127.97] Length = 763 Score = 206 bits (524), Expect = 6e-51, Method: Composition-based stats. Identities = 80/473 (16%), Positives = 140/473 (29%), Gaps = 52/473 (10%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + + L L+E R+ + L + S G LP G K + + ++R E Sbjct: 310 KLLQEHLKFLEEAEKRNHLKIGKEQELF--FFDEVSPGCPFLLPNGTKIFNALQKLLRTE 367 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + +W +SG + Y +M +L D + P + +F Sbjct: 368 YRKRGYQEVQSPNMYDVGIWRQSGHWAHYKDDMFKL-DVEKRDWALKPMNCPGHCIMFGH 426 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SYR LP + R+E G+ R R+F D + F + + +F Sbjct: 427 RERSYRELPLRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTDNQIMEE-IEGLFD 485 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 I+ G ++ + P E A+ + D Sbjct: 486 FLRAIYGLFGFSF-KLKLSTRPEKYLGKLETWDFAEAQLREALTKFKGAD---------- 534 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL--- 296 I E A Y D+ + D+L + + ++ F +Y Sbjct: 535 ------WEIDEGDGAFYGPKIDI---TISDALKREHQCATIQLDYQLPLNFKLEYMTGET 585 Query: 297 ----------PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP----- 341 A +G S G R VI + G + Sbjct: 586 IPKSAAPANPKAEAKPEGDSNPTQAQPSDSSTPGPGRARPVVIHRAIIGSFERFFGILIE 645 Query: 342 ----DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 I I D E++ L +V D G + + L Sbjct: 646 HFGGKWPFWLSPRQILIVPVMASANDYVEELQEILRGDKLNVDIDLSGHTMQKKIRNGQL 705 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIRED----MSLEEVINYASHRFSNNR 446 + +VG++ V I++R + + LEE R Sbjct: 706 AQYNFIFVVGAQEKESRSVNIRNRDDPSSQTKGSLIPLEEARAKLRALRKERR 758 >gi|262341223|ref|YP_003284078.1| threonine--tRNA ligase [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272560|gb|ACY40468.1| threonine--tRNA ligase [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 424 Score = 206 bits (524), Expect = 7e-51, Method: Composition-based stats. Identities = 76/437 (17%), Positives = 148/437 (33%), Gaps = 38/437 (8%) Query: 11 LQENPR--DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 L+E+P D KL + G+ WLP G +N+ + + Q ++G Sbjct: 9 LKEDPNTIDHRKIGKKLKFFI-FSDKVGSGLPLWLPRGTILRNNLEEFLTDIQKKSGYEM 67 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 + P + L+++SG + YGK+ + R ++ + P + +++RS SYR Sbjct: 68 VVTPHIGHKKLYIQSGHWRKYGKDNFKPIQTPREEEEFLLKPMNCPHHCEVYRSQEWSYR 127 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP F + +R E G+ R R F DA+ F T + + K+ +F Sbjct: 128 DLPKRFAEFGTVYRYEQSGELHGLTRVRSFTQDDAHIFC-TYDQVLEEFKKVINLVFYVF 186 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 LG +R + S+ + + + Sbjct: 187 RCLGFSEYTVRISLRD-------------TSKIDNYIGSEKNWEKAEKAILNAVKEEKIK 233 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 SI A Y D + DSL + ++ ++ +KG Sbjct: 234 ASINYGEAAFYGPKLDFL---IKDSLGRSWQLGTIQVDYNLP--------ERFDLYYKGK 282 Query: 306 DGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + + + G++ + A++ G +W + I Sbjct: 283 NNEKCRPVMIHRAPFGSLERMIAIVIEHTKGNLPLW------LAPNQGVILPISDKYIVY 336 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 +KI + VF D E+I + ++ P +I+G K + + ++ G Sbjct: 337 AKKILNLMLNYNIRVFVDSRNEKINKKIRDSEEKKIPYMIILGEKEEKNEMISLRRHGLG 396 Query: 425 IREDMSLEEVINYASHR 441 S+ + I + Sbjct: 397 HIGTFSISKGIETIFNE 413 >gi|326476791|gb|EGE00801.1| threonyl-tRNA synthetase [Trichophyton tonsurans CBS 112818] Length = 753 Score = 206 bits (524), Expect = 7e-51, Method: Composition-based stats. Identities = 80/473 (16%), Positives = 140/473 (29%), Gaps = 52/473 (10%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + + L L+E R+ + L + S G LP G K + + ++R E Sbjct: 300 KLLQEHLKFLEEAEKRNHLKIGKEQELF--FFDEVSPGCPFLLPNGTKIFNALQKLLRTE 357 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + +W +SG + Y +M +L D + P + +F Sbjct: 358 YRKRGYQEVQSPNMYDVGIWRQSGHWAHYKDDMFKL-DVEKRDWALKPMNCPGHCIMFGH 416 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SYR LP + R+E G+ R R+F D + F + + +F Sbjct: 417 RERSYRELPLRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTDNQIMEE-IEGLFD 475 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 I+ G ++ + P E A+ + D Sbjct: 476 FLRAIYGLFGFSF-KLKLSTRPEKYLGKLETWDFAEAQLREALTKFKGAD---------- 524 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL--- 296 I E A Y D+ + D+L + + ++ F +Y Sbjct: 525 ------WEIDEGDGAFYGPKIDI---TISDALKREHQCATIQLDYQLPLNFKLEYMTGET 575 Query: 297 ----------PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP----- 341 A +G S G R VI + G + Sbjct: 576 IPKSAAPANPKAEAKPEGDSNPTQAQPSDSSTPGPGRARPVVIHRAIIGSFERFFGILIE 635 Query: 342 ----DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 I I D E++ L +V D G + + L Sbjct: 636 HFGGKWPFWLSPRQILIVPVMASANDYVEELQEILRGDKLNVDIDLSGHTMQKKIRNGQL 695 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIRED----MSLEEVINYASHRFSNNR 446 + +VG++ V I++R + + LEE R Sbjct: 696 AQYNFIFVVGAQEKESRSVNIRNRDDPSSQTKGSLIPLEEARAKLRALRKERR 748 >gi|257068556|ref|YP_003154811.1| threonyl-tRNA synthetase [Brachybacterium faecium DSM 4810] gi|256559374|gb|ACU85221.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Brachybacterium faecium DSM 4810] Length = 666 Score = 206 bits (524), Expect = 7e-51, Method: Composition-based stats. Identities = 61/454 (13%), Positives = 130/454 (28%), Gaps = 49/454 (10%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 I + RD +L L + + G+ + P G + R G Sbjct: 248 RIAEAERRDHRRLGSELDLFS-FPDEIGSGLPVFHPKGAMVKMEMEDYSRRRHVEAGYSF 306 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTD 116 +S P + +L+ S + Y + M R + P + + Sbjct: 307 VSSPHITKKNLFETSRHLEWYAEGMYPPMHVDEERDDEGNITRQGQDYYLKPMNCPMHNL 366 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 ++RS +SYR LP ++ +R E G+ R+R F DA+ + + + Sbjct: 367 VYRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYTTREQMKEEL-T 425 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 + L + GL + + + E D + Sbjct: 426 SLLGFVLDLLRDYGLDDFYLELSTRDPEKSVGDE----------------TTWDEATRTL 469 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 + A Y + + D++ ++S ++ Sbjct: 470 EEVATESGLELVPDPGGAAFYGPKI---SVQAKDAIGRTWQLSTIQLDF--------FEP 518 Query: 296 LPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + DG + G++ V+ + G +W V + + Sbjct: 519 ELFELEYTAPDGSRQRPVMIHRALFGSIERFFGVLLEHYAGAFPVWLAPVQVVGVPVA-- 576 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 E++ A+L G V D +++ + P +I G + + Sbjct: 577 ----AEYVPYLEEVAAKLRAHGVRVEVDSSDDRMQKKIRTHTKEKVPYLLIAGGEDQAHG 632 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 V + R + ++ ++ + V Sbjct: 633 AVSFRMRDGSQDNGIDVDAAVDRIVTAIRDKAQV 666 >gi|257869604|ref|ZP_05649257.1| prolyl-tRNA synthetase [Enterococcus gallinarum EG2] gi|257803768|gb|EEV32590.1| prolyl-tRNA synthetase [Enterococcus gallinarum EG2] Length = 575 Score = 206 bits (524), Expect = 7e-51, Method: Composition-based stats. Identities = 97/234 (41%), Positives = 146/234 (62%), Gaps = 1/234 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK F+P L+E P DAE SH+L++R G I Q + GIY +LPL Q+ L+ + ++REE Sbjct: 9 MKQSKLFIPTLREIPSDAETLSHQLLVRAGYIRQVAAGIYMYLPLAQRVLEKIKKLMREE 68 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM++P L +LW +GR YG+ + +L DRN++ + GPTHEE T++ +S Sbjct: 69 LAKIDAVEMTMPVLLPLELWQSTGRDGLYGRSLYQLTDRNEREYVLGPTHEEPFTELIKS 128 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP + YQIQ K+RDE RPRFG++RSREF+M+D YSF +Y + + Sbjct: 129 EISSYKRLPISLYQIQSKYRDEQRPRFGLIRSREFIMQDGYSFHADESSLDTTYRRYEAA 188 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS 234 Y I R GL+ + ++G +GG S EF+ L+ GE ++ C D+ Sbjct: 189 YHAILQRCGLEYRAVIGDNGLMGGHDSKEFMALSQIGE-ELICYSTESDYVANW 241 Score = 146 bits (367), Expect = 9e-33, Method: Composition-based stats. Identities = 67/187 (35%), Positives = 102/187 (54%), Gaps = 3/187 (1%) Query: 258 ATSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 A +D + D P+ K V RGIEVGHIF GTKYS + AT +G++ V MG Sbjct: 386 AFADFRLVQEGDPSPDGKGVLTFTRGIEVGHIFKLGTKYSERLGATVVDENGQETPVMMG 445 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R+++ ++E + +GI WP +AP+ I +I D CE++ + V Sbjct: 446 CYGIGVSRLLSTIVEQHGNEEGIDWPKEIAPYDIHIIQTTMEDSYQTALCEEVEQAMLAV 505 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD E+ G +FA ADL+G P+++ +G+K ++ VEIK + T ++ EEV Sbjct: 506 GYEVLVDDRNERAGVKFADADLIGCPIRLTIGNK-ATEGIVEIKIKHTNATVEVRKEEVA 564 Query: 436 NYASHRF 442 + Sbjct: 565 TTLTILL 571 >gi|268608298|ref|ZP_06142025.1| threonyl-tRNA synthetase [Ruminococcus flavefaciens FD-1] Length = 646 Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 79/441 (17%), Positives = 148/441 (33%), Gaps = 40/441 (9%) Query: 2 RRSKY--FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR 58 + S+ +L +++E RD + + L M + G+ WLP G K + + R Sbjct: 225 KASQLDEYLKMIEEAKLRDHKKLGKEQALF--MFDHTAPGMPYWLPRGWKLFNALLEYWR 282 Query: 59 EEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDI 117 G E+S P L +LWV SG +D Y M + D P + + Sbjct: 283 GVHEDHGYTEISGPVLSKKELWVTSGHWDHYQDGMFVIPAEEDNEVYCAKPMNCPNAIKV 342 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 + + +SY+ LP F Q+ + R E G+ R ++F DA+ + + N Sbjct: 343 YMNRQRSYKELPLKFNQVDVIHRKEKSGELNGLFRVQQFRQDDAHILVTEEQIASE-IND 401 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + I++ GL+ + P A+ + K D Sbjct: 402 IMDIATEIYNTFGLEY-KAELSTRPDDYMGDINVWNKAEADLKAILEDKYGPD------- 453 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + E A Y D+ K+ D++ ++ ++ F + + Sbjct: 454 --------GYELNEGDGAFYGPKIDL---KMKDAIGREWQMGTIQLD----FQLPLNFKM 498 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 A+ + V + G+ +I + G W + I Sbjct: 499 KYIAS---DGSEKQPVMIHRAIFGSFERFIGIITENFAGAFPFW------LSPMQVGIVP 549 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D +K+ A L K D + + ++ P VI+G + +V Sbjct: 550 IRTEHNDYAKKVAALLKKNHIRAEADYTDDNMKNKIRKFKDFKDPYVVIIGDSEAENEQV 609 Query: 417 EIKHRLTGIREDMSLEEVINY 437 I R +++ L++ I Sbjct: 610 SINIRGNKQLKNVPLDKFIEM 630 >gi|297279894|ref|XP_002808285.1| PREDICTED: LOW QUALITY PROTEIN: threonyl-tRNA synthetase, mitochondrial-like [Macaca mulatta] Length = 669 Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 86/457 (18%), Positives = 144/457 (31%), Gaps = 57/457 (12%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + RD + L H+ S G +LP G + + + A IR E R G E+ Sbjct: 245 REEAELRDHRRIGKEQELF--FFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEV 302 Query: 70 SVPTLQSADLWVESGRYDSYGKEML----------------RLADRNDKAMIYGPTHEEV 113 PTL S LW +SG ++ Y ++M + P + Sbjct: 303 KTPTLFSTKLWEQSGHWEHYQEDMFAVQPSGSDRPASSQSDDSTRHTTDILALKPMNCPA 362 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 +F +S+R LP R E G+ R R F DA+ F T + Sbjct: 363 HCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAE 422 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 ++ LG + P G D Sbjct: 423 -IQSCLDFLRSVYAVLGFSFRLA-LSTRPSGF-----------------LGDPCLWDQAE 463 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y DVH L D+L + ++ F Sbjct: 464 QVLQRALKEFGEPWDLNSGDGAFYGPKIDVH---LHDALGRPHQCGTIQLD----FQLPL 516 Query: 293 KYSLPMSATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 ++ +KG G + V + +G++ + V+ + G WP ++PF++ + Sbjct: 517 RFD----LQYKGQAGALERPVLIHRAVLGSVERLLGVLA---ESCGGKWPLWLSPFQVVV 569 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKF 410 I + + + + L G D D G + + A L + Q +VG K Sbjct: 570 IPVGTEQE---EYAREAQQSLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQFVVGQKE 626 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 S V I+ R + L E + + P Sbjct: 627 QSKRTVNIRTRDNRRLGEWDLPEAVQRLVELQNMRVP 663 >gi|145224420|ref|YP_001135098.1| threonyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK] gi|189083613|sp|A4TD09|SYT_MYCGI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|145216906|gb|ABP46310.1| Ser-tRNA(Thr) hydrolase [Mycobacterium gilvum PYR-GCK] Length = 695 Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 63/450 (14%), Positives = 132/450 (29%), Gaps = 49/450 (10%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 I + RD +L L + + G+ + P G + R + G + Sbjct: 256 IEEAQRRDHRKLGVELDLFS-FPDELGSGLPVFHPKGGVVRRELEEYSRRKHIEAGYEFV 314 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDI 117 + P + L++ SG + Y M + + P + + I Sbjct: 315 NTPHITKEQLYITSGHLEWYADGMFPPMQIDAEYNEDGTVRKPGQDYYLKPMNCPMHHLI 374 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 +RS +SYR LP ++ +R E G+ R R DA+ + E + Sbjct: 375 YRSRGRSYRELPLRLFEFGSVYRYEKSGVIHGLTRVRGMTQDDAHIYCTREEMRDEL-AR 433 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + L + GL + + + S D + + Sbjct: 434 LLQFVLDLLADYGLDDFYLELST----------------KDPDKFVGSDDLWEEATETLR 477 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + A Y + ++ D+L N ++S ++ F ++ Sbjct: 478 EVAESSGLALVPDPGGAAFYGPKI---SVQVRDALGRNWQMSTIQLD----FNMPDRF-- 528 Query: 297 PMSATFKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 + +DG + G++ V+ + G +W V I + Sbjct: 529 --ELEYTSSDGTRRRPVLIHRALFGSIERFFGVLTEHYAGAFPVWLAPVQVVGIPVA--- 583 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + + A L + G V D +++ + P ++ G K V Sbjct: 584 ---DAHAGYLDGVAAELRRRGIRVEVDASDDRMAKKIVNHTNQKVPFMLLAGDKDVEAGA 640 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + + ++ + + Sbjct: 641 VSFRFGDRTQINGVPRDQAVEAIVDWVNRR 670 >gi|221480967|gb|EEE19381.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii GT1] gi|221501688|gb|EEE27452.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii VEG] Length = 844 Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 83/466 (17%), Positives = 148/466 (31%), Gaps = 65/466 (13%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L L S G WLP G K + + +REE G E+ Sbjct: 390 EEAKKRDHRVLGQNLHLF-FFDTNVSPGSCFWLPDGAKVYNKLCMFMREEYRFRGFQEVI 448 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + S DLW SG Y +Y + M L D K P + +F+ SYR LP Sbjct: 449 SPNIFSCDLWKVSGHYQNYKENM-YLFDVEGKEWGLKPMNCPGHCIMFKHLAPSYRQLPL 507 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + + ++ + G Sbjct: 508 RLADFGVLHRNELSGSLTGLTRVRRFQQDDAHIFCRLDQVKEE-VADALNFLFFVYDQFG 566 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 F + T + + D + ++ + Sbjct: 567 FS------------------FELFLSTRPKKALGERAVWDSAEAALKAALEETGRPWQLN 608 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTKYSLPMSATFKGA-- 305 A Y D+ L+D+L + ++ F + A + Sbjct: 609 PGDGAFYGPKIDIR---LWDALKRPHQCGTIQLDFQLPIRFNLQYRTQDEAVAGARDKAK 665 Query: 306 -----------------------------DGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 G V + +G++ + AV+ GK Sbjct: 666 EDKETGEKRTDSEHEQKEEEAFGVELPLRPGMARPVIIHRAILGSIERMCAVVIEHTGGK 725 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 W ++P + ++ I D + L G +V D + + A Sbjct: 726 LPFW---LSPKQCIVLPISDK---VNDYAASVRDVLHSCGYEVGLDVSNNTVNKKIREAQ 779 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGI-REDMSLEEVINYASHR 441 L + ++VG K +D V ++ R ++ +S+E+++ + Sbjct: 780 LQQWNYLLVVGEKERADKTVTVRDRADPEHQKVLSMEDLLTLFEKQ 825 >gi|284044947|ref|YP_003395287.1| prolyl-tRNA synthetase [Conexibacter woesei DSM 14684] gi|283949168|gb|ADB51912.1| prolyl-tRNA synthetase [Conexibacter woesei DSM 14684] Length = 560 Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 95/221 (42%), Positives = 133/221 (60%), Gaps = 2/221 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S Y LP ++ P DAE SH+LM+R G+I Q G++++LP G + V IIREE Sbjct: 3 RLSSYLLPTEKQAPADAEAISHQLMVRAGLIRQLGAGLWTYLPAGWRVHRRVEQIIREEM 62 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 + G EM +P L A+ W +GR + E+ +L DR M+ THEE++T Sbjct: 63 DAIGGQEMLMPLLNPAEPWRRTGRIE--IDEIFKLEDRKGTEMVLAMTHEEIVTTHVAQV 120 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 ++SYR+LP YQIQ+K RDE RPR GV+R+REF MKD+YSFD G + SY K V+Y Sbjct: 121 VRSYRDLPQILYQIQVKERDEPRPRAGVLRTREFRMKDSYSFDRDEAGLEESYAKHIVAY 180 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF 222 RIF R GL+ + ++ G +GG +HE++ GE +V Sbjct: 181 DRIFERTGLEWYRVESDVGMMGGTAAHEYMAPCAAGEDEVA 221 Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 96/193 (49%) Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 VE +DV + D++ + + IEVG+IF GT+YS + A+F G Sbjct: 363 VEPGRDFPFERADVRAVEPGDTVGGHPIRIEKAIEVGNIFKLGTRYSSALGASFLDESGA 422 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 V MG YGIG R+VAA +E D GI WP ++APF L+ I + R +++ Sbjct: 423 QQLVTMGCYGIGPARIVAAAVEQYADDAGIAWPRALAPFDAELVVISRGESEERAFADRL 482 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 Y L G DV +DD G +FA A+LLG PL+V VG + ++ ++E++ R R Sbjct: 483 YEELKATGLDVLYDDRDAGPGEKFADAELLGAPLRVTVGKRTLAAGELEVQLRRGRERRS 542 Query: 429 MSLEEVINYASHR 441 + LE Sbjct: 543 VPLEGAAEAVHEL 555 >gi|21672515|ref|NP_660582.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25009415|sp|Q8K9S2|SYP_BUCAP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|21623136|gb|AAM67793.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 571 Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 103/226 (45%), Positives = 152/226 (67%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY L+E P A+I SH+LML++GMI + S GIY WLP G + L+ + II+ E Sbjct: 1 MRASKYLFSTLKETPHHAKIISHQLMLKSGMIRKLSSGIYIWLPTGIRVLNKIKDIIKNE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+E+ +P +Q LW SGR YG+E+ + DR ++ I GPT+EEV+T+ R+ Sbjct: 61 MRKINALEVLMPVVQPKKLWENSGRLSIYGEELFQFYDRRNQKFILGPTNEEVVTNFIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I S++ LP YQIQ KFRDE+RPRFG++RSREF+MKDAYSF + + +YN + S Sbjct: 121 EINSFKELPLIIYQIQTKFRDEIRPRFGIVRSREFIMKDAYSFHINKHCLEKTYNDFYQS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 Y+ IF+++ ++ + A+SG +GG +SHEF L++ GE ++ SK+ Sbjct: 181 YINIFNKIKIQFRAVNADSGSMGGSISHEFQALSENGEDEIVFSKN 226 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 3/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P D+ N D + + IE+GHIF G +YS M+ + ++ Sbjct: 378 PIPIIKDIRNITKKDISSDGSKSLEIKKSIEIGHIFQLGKEYSKKMNVLVQEQHNNYKHI 437 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYAR 371 MG YGIG R+VA+VIE ++D GIIWPDS+APF++ ++ + + ++ E +Y Sbjct: 438 HMGCYGIGITRIVASVIEQNYDDNGIIWPDSIAPFQVVILPLNTKNCIKIKEITENLYKI 497 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L K DV D E+ G F DL+G P Q+I+ + ++++KVE + R + + Sbjct: 498 LKKEKIDVILYDRNERPGIMFNQIDLIGIPHQIIISPRHINENKVEYRERKNNKSTLIKV 557 Query: 432 EEVINYASHRFS 443 +E+ + + + Sbjct: 558 KEITYFLKKKLN 569 >gi|238504300|ref|XP_002383381.1| threonyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357] gi|317138130|ref|XP_001816697.2| threonyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40] gi|220690852|gb|EED47201.1| threonyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357] Length = 721 Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 78/461 (16%), Positives = 142/461 (30%), Gaps = 41/461 (8%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ + L L+E R+ + L + S G LP G K + + ++R E Sbjct: 281 KQMQEHLKFLEEAEKRNHVKIGKEQELF--FFDEVSPGCPFLLPNGTKIFNALQTLLRSE 338 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + +W SG + Y +M +L D + P + +F Sbjct: 339 YRKRGYQEVQTPNMYDVGIWKTSGHWAHYKDDMFKL-DVEKREWALKPMNCPGHFVLFGH 397 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SYR LP + R+E G+ R R+F D + F + + +F Sbjct: 398 RERSYRELPLRLADFGVLHRNEASGALSGLTRVRKFQQDDTHIFCTQDQITSE-IEGLFD 456 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 I+ G ++ + P + + ++ Sbjct: 457 FLQSIYGLFGFTF-KLKLSTRP-----------------EKYLGELETWNYAEEQLKAAM 498 Query: 240 DDIISLNSIV-EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + + E A Y D+ + D+L + + ++ F +Y Sbjct: 499 TKFKGDDWTIDEGDGAFYGPKIDI---TIADALKREFQCATIQLDYQAPINFKLEYMSNE 555 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW---------PDSVAPFKI 349 A A + + S G R VI + G + Sbjct: 556 KADKSQAAAESAEGENKSSEPGPGRARPVVIHRAIIGSFERFLGILTEHFGGKWPFWISP 615 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 I I D E++ L +V D G + + L + +VG++ Sbjct: 616 RQILIVPVMPAVNDYVEELQTILRGDKLNVDIDISGNTMQKKIRTGQLAQYNFIFVVGAQ 675 Query: 410 FVSDSKVEIKHRL---TGIREDM-SLEEVINYASHRFSNNR 446 V I++R T + M LEE R Sbjct: 676 EKEARTVNIRNRDDPATQKQGVMIPLEEAREKLRALRKERR 716 >gi|197097988|ref|NP_001125825.1| threonyl-tRNA synthetase, cytoplasmic [Pongo abelii] gi|55729334|emb|CAH91401.1| hypothetical protein [Pongo abelii] Length = 563 Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 75/449 (16%), Positives = 149/449 (33%), Gaps = 44/449 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 146 KMLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNALIEFIRSE 203 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + P + +F Sbjct: 204 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEL-FALKPMNCPGHCLMFDH 262 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 263 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 321 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E D Sbjct: 322 FLRTVYSVFGFSFKLN-LSTRPEKFLGDIE-----------------VWDQAEKQLENSL 363 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 364 NEFGEKWELNSGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 412 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 413 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 468 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ + D D G + + A L + L ++VG K V Sbjct: 469 --TCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNLILVVGEKEKISGTV 526 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 I+ R + + ++ E I + Sbjct: 527 NIRTRDNKVHGERTISETIERLQQLKESR 555 >gi|302404307|ref|XP_002999991.1| threonyl-tRNA synthetase [Verticillium albo-atrum VaMs.102] gi|261361173|gb|EEY23601.1| threonyl-tRNA synthetase [Verticillium albo-atrum VaMs.102] Length = 790 Score = 206 bits (523), Expect = 8e-51, Method: Composition-based stats. Identities = 79/473 (16%), Positives = 148/473 (31%), Gaps = 64/473 (13%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD + L H+ S G WLP G + + + A I+E+ + E+ Sbjct: 326 LEEAAARDHRKLGEQQQLF--FFHELSPGSAMWLPHGARIYNTLMAYIKEQYFKRDYHEV 383 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P + ++DLW SG + Y +M + D + + P + +F K+Y LP Sbjct: 384 ITPNMYNSDLWKVSGHWAHYKDDMF-VMDVDKEQFALKPMNCPGHCLMFGHAPKAYHQLP 442 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 + + R+E G+ R R F DA+ F + + +F ++ L Sbjct: 443 WRVADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCREDQIGQE-ITNLFDFLRSMYSLL 501 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 G +R + P +F+ T + K +D +E ++ Sbjct: 502 GFTYK-LRLSTRP------DKFMGERATWDRAEDMLKVALDEFAATEGGVAWEL------ 548 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY-------------- 294 E A Y D+ K+ D L + + ++ FG +Y Sbjct: 549 NEGDGAFYGPKIDI---KILDCLNREWQCATIQLDFQLPINFGLEYVTADSAAKTKEDAA 605 Query: 295 -------SLPMSATFK-----------GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 + A + S + R +IE Sbjct: 606 IKGPEVKAKEPEAVVESAAAAAAPAAADGKEPAKKQLRMSKPLTWKRPPRILIEHFGGKW 665 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 + + E++ G V D GE + + A Sbjct: 666 PMWLSPRQIQIIPVGR-------GFFEYAEEVQKIFKDAGFWVDVDLSGETLQKKVRRAQ 718 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED----MSLEEVINYASHRFSNN 445 L + IVG + + +V +++R +D + + E I + Sbjct: 719 LAQYNFVFIVGDEEMKGRQVNVRYRDDTSSQDRGKPVDVNEAITKLKELRDSR 771 >gi|237844903|ref|XP_002371749.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii ME49] gi|211969413|gb|EEB04609.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii ME49] Length = 844 Score = 206 bits (523), Expect = 8e-51, Method: Composition-based stats. Identities = 83/466 (17%), Positives = 148/466 (31%), Gaps = 65/466 (13%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L L S G WLP G K + + +REE G E+ Sbjct: 390 EEAKKRDHRVLGQNLHLF-FFDTNVSPGSCFWLPDGAKVYNKLCMFMREEYRFRGFQEVI 448 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + S DLW SG Y +Y + M L D K P + +F+ SYR LP Sbjct: 449 SPNIFSCDLWKVSGHYQNYKENM-YLFDVEGKEWGLKPMNCPGHCIMFKHLAPSYRQLPL 507 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + + ++ + G Sbjct: 508 RLADFGVLHRNELSGSLTGLTRVRRFQQDDAHIFCRLDQVKEE-VADALNFLFFVYDQFG 566 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 F + T + + D + ++ + Sbjct: 567 FS------------------FELFLSTRPKKALGERAVWDSAEAALKAALEETGRPWQLN 608 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTKYSLPMSATFKGA-- 305 A Y D+ L+D+L + ++ F + A + Sbjct: 609 PGDGAFYGPKIDIR---LWDALKRPHQCGTIQLDFQLPIRFNLQYRTQDEAVAGARDKAK 665 Query: 306 -----------------------------DGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 G V + +G++ + AV+ GK Sbjct: 666 EDKETGEKRTDSEHEQKEEEAFGVELPLRPGMARPVIIHRAILGSIERMCAVVIEHTGGK 725 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 W ++P + ++ I D + L G +V D + + A Sbjct: 726 LPFW---LSPKQCIVLPISDK---VNDYAASVRDVLHSCGYEVGLDVSNNTVNKKIREAQ 779 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGI-REDMSLEEVINYASHR 441 L + ++VG K +D V ++ R ++ +S+E+++ + Sbjct: 780 LQQWNYLLVVGEKERADKTVTVRDRADPEHQKVLSMEDLLTLFEKQ 825 >gi|315444753|ref|YP_004077632.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Mycobacterium sp. Spyr1] gi|315263056|gb|ADT99797.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Mycobacterium sp. Spyr1] Length = 695 Score = 206 bits (523), Expect = 8e-51, Method: Composition-based stats. Identities = 64/450 (14%), Positives = 133/450 (29%), Gaps = 49/450 (10%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 I + RD +L L + + G+ + P G + R + G + Sbjct: 256 IEEAQRRDHRKLGVELDLFS-FPDELGSGLPVFHPKGGVVRRELEEYSRRKHIEAGYEFV 314 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDI 117 + P + L++ SG + Y M + + P + + I Sbjct: 315 NTPHITKEQLYITSGHLEWYADGMFPPMQIDAEYNEDGTVRKPGQDYYLKPMNCPMHHLI 374 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 +RS +SYR LP ++ +R E G+ R R DA+ + E + Sbjct: 375 YRSRGRSYRELPLRLFEFGSVYRYEKSGVIHGLTRVRGMTQDDAHIYCTREEMRDEL-AR 433 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + L + GL + + + S D + + Sbjct: 434 LLQFVLDLLADYGLDDFYLELST----------------KDPDKFVGSDDLWEEATETLR 477 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + A Y + ++ D+L N ++S ++ F ++ Sbjct: 478 EVAESSGLALVPDPGGAAFYGPKI---SVQVRDALGRNWQMSTIQLD----FNMPDRF-- 528 Query: 297 PMSATFKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 + +DG + G++ V+ + G +W V I + Sbjct: 529 --ELEYTSSDGTRRRPVLIHRALFGSIERFFGVLTEHYAGAFPVWLAPVQVVGIPVAVAH 586 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 A + + A L + G V D +++ + P ++ G K V Sbjct: 587 AG------YLDGVAAELRRRGIRVEVDASDDRMAKKIVNHTNQKVPFMLLAGDKDVEAGA 640 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + + ++ + + Sbjct: 641 VSFRFGDRTQINGVPRDQAVEAIVDWVNRR 670 >gi|87302633|ref|ZP_01085450.1| prolyl-tRNA synthetase [Synechococcus sp. WH 5701] gi|87282977|gb|EAQ74934.1| prolyl-tRNA synthetase [Synechococcus sp. WH 5701] Length = 610 Score = 206 bits (523), Expect = 8e-51, Method: Composition-based stats. Identities = 110/241 (45%), Positives = 154/241 (63%), Gaps = 4/241 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L+++P +AEI SHKL+LR G + + + G+Y++LPL + L ++AI+R+E Sbjct: 1 MRVSRLMLVTLRDDPAEAEIPSHKLLLRGGYMRRVASGVYAYLPLLWRVLSKISAIVRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + TGA+E +P LQ A LW SGR+ Y M L DR ++++ GPTHEEV+T + Sbjct: 61 MDATGALETLLPALQPASLWERSGRWQGYTAGEGIMFHLVDRQERSLGLGPTHEEVITAL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP T YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + +Y +M Sbjct: 121 AADLLRSYRQLPVTLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADEADLRLTYQRM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y RIF R GL+++ + A+SG IGG S EF+V AD GE + S D + E Sbjct: 181 DQAYRRIFSRCGLRTVAVEADSGAIGGSASQEFMVTADAGEDLILSSADGR-YAANQERA 239 Query: 238 D 238 Sbjct: 240 C 240 Score = 156 bits (394), Expect = 7e-36, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 108/210 (51%), Gaps = 4/210 (1%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSL---PENKRVSARGIEVGHIFYFGTKYSL 296 D + + A +D+ + + + P + ++RGIEVGHIF G KYS Sbjct: 393 PDTHLVGARWPALGAGLPGVADLRSAQPGERCLQDPSQRLEASRGIEVGHIFQLGRKYSQ 452 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + ATF G D + MG YGIG R+ A +E HD +GI WP ++APF++ ++ A Sbjct: 453 ALEATFTNEQGLDEPLWMGCYGIGVSRLAQAAVEQHHDQQGICWPVAIAPFEVIVLVASA 512 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D V E+++ L + G +V DD E+ G +F ADL+G P +V+VG + + ++V Sbjct: 513 QDPVQVALGEQLHDELEQAGLEVLLDDRSERAGVKFKDADLIGIPWRVVVG-RGAASAQV 571 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNNR 446 E+ R G + D++ V+ + R Sbjct: 572 ELVERAGGAKRDVAAGAVVALLQDHIAAAR 601 >gi|78185232|ref|YP_377667.1| prolyl-tRNA synthetase [Synechococcus sp. CC9902] gi|114152270|sp|Q3AWR9|SYP_SYNS9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|78169526|gb|ABB26623.1| Prolyl-tRNA synthetase [Synechococcus sp. CC9902] Length = 593 Score = 206 bits (523), Expect = 8e-51, Method: Composition-based stats. Identities = 109/240 (45%), Positives = 147/240 (61%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P +AEIASH+L+LR G I + GIY +LPL K + + AI+R+E Sbjct: 1 MRVSRLLLVTLRDVPAEAEIASHQLLLRGGYIRRIGSGIYGYLPLMWKVIQRITAIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N GA E +P L A+LW SGR+ Y M L DR + + GPTHEEV+T + Sbjct: 61 LNTAGAQETLLPQLHPAELWQRSGRWQGYTAGEGIMFHLEDRQGRELGLGPTHEEVVTSL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SY+ LP YQ+Q KFRDE+RPRFG+MR REF+MKDAYSF +++Y +M Sbjct: 121 AGELLQSYKQLPVNLYQVQTKFRDEIRPRFGLMRGREFIMKDAYSFHANEADLQNTYLEM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y RIF R GL ++P+ A+SG IGG S EF+V AD GE + S D + E Sbjct: 181 DQAYRRIFERCGLAAVPVDADSGAIGGAASQEFMVTADAGEDLILLSDDGT-YAANQEKA 239 Score = 162 bits (411), Expect = 8e-38, Method: Composition-based stats. Identities = 63/176 (35%), Positives = 88/176 (50%), Gaps = 4/176 (2%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 PE + RGIEVGHIF G KYS M + F GK + MG YGIG R+ A +E Sbjct: 422 PEAHLIEKRGIEVGHIFQLGRKYSEAMDSRFTNEAGKTEHFWMGCYGIGISRLAQAAVEQ 481 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 HD GI WP ++AP++ ++ DQ + E +Y +L G D +DD E+ G + Sbjct: 482 HHDDAGICWPAAIAPYEAIVVVANMQDQTQAELGESLYKQLLAAGVDALFDDRKERAGVK 541 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 F ADL+G P +V+VG + SD VE+ R + + + RP Sbjct: 542 FKDADLIGIPWRVVVG-RDASDGVVELVERANRAVQKLPHADA---LKELLRTLRP 593 >gi|311897171|dbj|BAJ29579.1| putative prolyl-tRNA synthetase [Kitasatospora setae KM-6054] Length = 586 Score = 206 bits (523), Expect = 9e-51, Method: Composition-based stats. Identities = 114/285 (40%), Positives = 158/285 (55%), Gaps = 3/285 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ ++P L+E+P DA+ ASH+L++R G + Q + G YS LPL + + A++REE Sbjct: 1 MRWSQLYVPTLREDPADADAASHRLLVRAGYVRQLAAGHYSLLPLAARVRARIVAVVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 R GA E +P L A+LW +GR++S G+EM RL DR G THEEV + Sbjct: 61 MERIGAQEFLLPALHPAELWRRTGRWESMGEEMFRLTDRKGAEQALGMTHEEVFAHLAE- 119 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP T+YQ Q KFRDE RPR G++R REF MKD+YSFDL G S+ ++ Sbjct: 120 ELRSYRQLPQTWYQFQTKFRDEARPRSGLLRVREFTMKDSYSFDLDEAGMARSFEAHRLA 179 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPSENTDF 239 YLRIF RLGL + +RA SG +GG S EF+ + GE V C + Sbjct: 180 YLRIFERLGLPAFGVRASSGAMGGSGSVEFMSPSAAGEDLVVRCPGCGYAANTEKALSAL 239 Query: 240 DDIISLNSIVEQWT-APYAATSDVHNEKLFDSLPENKRVSARGIE 283 + E+ A +D ++ ++ E ARGIE Sbjct: 240 PAVADPAERTERTGPAEQTERTDRSDQAGTFAVEEFATPGARGIE 284 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 2/193 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 +D+ + E R IEVGHIF G +Y+ + G G+ Sbjct: 392 GRDVRVTRWADLREVTAGEPCAECGAALEVLRTIEVGHIFQLGRRYTEALGVAVAGPAGE 451 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 MGSYGIG R++AA++E+ HD +GI WP +VAPF + L + +A E++ Sbjct: 452 RVVPLMGSYGIGVERLLAALVEAHHDERGIRWPAAVAPFDLVLTVLPDRGGAVAEAAERL 511 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 L G V DD E+ G +FA A+L+G P ++ +G++ ++ E+ R G + Sbjct: 512 CGELGAAGVRVLLDDRAERPGVKFADAELIGVPWRLTLGARGLAAGTAELTARADGSTRE 571 Query: 429 MSLEEVINYASHR 441 + L+ + Sbjct: 572 LGLDAAVPELRAL 584 >gi|83764551|dbj|BAE54695.1| unnamed protein product [Aspergillus oryzae] Length = 717 Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats. Identities = 78/461 (16%), Positives = 142/461 (30%), Gaps = 41/461 (8%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ + L L+E R+ + L + S G LP G K + + ++R E Sbjct: 277 KQMQEHLKFLEEAEKRNHVKIGKEQELF--FFDEVSPGCPFLLPNGTKIFNALQTLLRSE 334 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + +W SG + Y +M +L D + P + +F Sbjct: 335 YRKRGYQEVQTPNMYDVGIWKTSGHWAHYKDDMFKL-DVEKREWALKPMNCPGHFVLFGH 393 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SYR LP + R+E G+ R R+F D + F + + +F Sbjct: 394 RERSYRELPLRLADFGVLHRNEASGALSGLTRVRKFQQDDTHIFCTQDQITSE-IEGLFD 452 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 I+ G ++ + P + + ++ Sbjct: 453 FLQSIYGLFGFTF-KLKLSTRP-----------------EKYLGELETWNYAEEQLKAAM 494 Query: 240 DDIISLNSIV-EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + + E A Y D+ + D+L + + ++ F +Y Sbjct: 495 TKFKGDDWTIDEGDGAFYGPKIDI---TIADALKREFQCATIQLDYQAPINFKLEYMSNE 551 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW---------PDSVAPFKI 349 A A + + S G R VI + G + Sbjct: 552 KADKSQAAAESAEGENKSSEPGPGRARPVVIHRAIIGSFERFLGILTEHFGGKWPFWISP 611 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 I I D E++ L +V D G + + L + +VG++ Sbjct: 612 RQILIVPVMPAVNDYVEELQTILRGDKLNVDIDISGNTMQKKIRTGQLAQYNFIFVVGAQ 671 Query: 410 FVSDSKVEIKHRL---TGIREDM-SLEEVINYASHRFSNNR 446 V I++R T + M LEE R Sbjct: 672 EKEARTVNIRNRDDPATQKQGVMIPLEEAREKLRALRKERR 712 >gi|73919784|sp|Q8FPJ3|SYT_COREF RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS Length = 694 Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats. Identities = 60/458 (13%), Positives = 133/458 (29%), Gaps = 49/458 (10%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + +Y + + RD +L L + + G+ + P G + R Sbjct: 258 KLDEYQTMLAEAEKRDHRRLGTELDLFS-FPDEIGSGLPVFHPNGAIVRLEMEEHSRRRH 316 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL------------ADRNDKAMIYGPT 109 + G ++ P +DL+ +SG Y + M + + P Sbjct: 317 IQAGYSFVNTPHATKSDLFEKSGHLGFYKEGMFPPLQLDAEYDAEGNQTKPGQDYYLKPM 376 Query: 110 HEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPE 168 + + IF S +SYR LP ++ +R E G+ R+R F DA+ + T + Sbjct: 377 NCPMHNLIFDSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYC-TED 435 Query: 169 GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFM 228 + + + + GL + + + + Sbjct: 436 QLEEELTSVLEFIISLLKDYGLDDFYLELST----------------KDPKKFVGDDEIW 479 Query: 229 DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIF 288 + + + A Y + + D++ ++S ++ F Sbjct: 480 ERSTEILQRVATNSGLDLVPDPEGAAFYGPKI---SVQAKDAIGRTWQMSTVQLD----F 532 Query: 289 YFGTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 ++ + DG + G++ V+ + G W Sbjct: 533 NLPERF----ELEYTSPDGSKQRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVV 588 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 I + + EK+ +L G D +++ + P ++ G Sbjct: 589 GIPVA------EDFIPHLEKVVDKLRARGFRAEVDTSDDRMQKKIRTHTTGKIPFMLLAG 642 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 + V V + + ++E + S Sbjct: 643 GRDVEADAVSFRFLDGTQVNGVPVDEAVELISTWILER 680 >gi|148508028|gb|ABQ75826.1| threonine--tRNA ligase [uncultured haloarchaeon] Length = 643 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 83/444 (18%), Positives = 149/444 (33%), Gaps = 44/444 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRT 64 Y + RD +L L + I G+ + P G+K L+ +++ Sbjct: 231 YLERREKAKERDHRKIGQELELFS--IPDVTGPGLPLYHPNGKKILNELSSYAESLNVDA 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P L +LW SG Y++Y +M L D +D P + IF S Sbjct: 289 GYEPVETPHLFKTELWKVSGHYENYVDDMF-LLDVSDDEYGLKPMNCPGHATIFNQQSWS 347 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP +Y+ +R E R G+ R F + D + F TPE + ++ S Sbjct: 348 YRDLPVRYYEDGKVYRKEQRGELSGLSRVWAFTIDDGHLFC-TPEQIEQEVTQVIESIQE 406 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + + GL + A + P S E A++ T Sbjct: 407 VLNTFGLDAEVALA-TRPEKSVGSDEIWQQAES-----------------QLETVLTSRG 448 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y D E D+L N ++ F ++ ++ Sbjct: 449 INYDLEPGDGAFYGPKIDFAFE---DALGRNWDGPTVQLD----FNMPDRFD----LSYT 497 Query: 304 GADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G D +DH + G+ V+ DGK +W I I Sbjct: 498 GEDNQDHQPVMIHRALYGSYERFFMVLIEHFDGKFPLW------LAPEQIRILPISDDQL 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 ++ + V DD + + P +I+GS + ++ R Sbjct: 552 GYAHRVKNQFDD--FRVEIDDQTRTLSRKIRAGQDDRIPYMIILGSDEEEAGTISVRDRF 609 Query: 423 TGIREDMSLEEVINYASHRFSNNR 446 ++D++++ ++ + N + Sbjct: 610 ENEKQDVNIDAFRSHVNAERRNRQ 633 >gi|198425233|ref|XP_002123203.1| PREDICTED: similar to novel prtoein similar to vertebrate threonyl-tRNA synthetase (TARS, zgc:92586) [Ciona intestinalis] Length = 630 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 71/450 (15%), Positives = 145/450 (32%), Gaps = 43/450 (9%) Query: 1 MRRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 M++ + +E RD + L H+ S G + P G + + + I+E Sbjct: 203 MKQ---WQKFQEEAKQRDHRKIGKEQELF--FFHELSPGSCFFFPRGAFIYNTLISFIKE 257 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 E + G E+ P + ++ LW+ SG + Y + M + + P + +F Sbjct: 258 EYRKRGFEEVVSPNIYNSKLWMTSGHWQHYDQNMFSFSVEKET-FALKPMNCPGHCLMFS 316 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 +S+R LP F + R+EL G+ R R F DA+ F + Sbjct: 317 HRSRSWRELPIRFADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRPEQIKDEM-RGAL 375 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 ++ G F + T + D Sbjct: 376 NFLKAVYDTFGFS------------------FKLFLSTRPEKFLGDPGMWDDAEKQLEEC 417 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + + A Y D+ ++ D+L + + ++ F +++L Sbjct: 418 LVEFDHPWKLNPGDGAFYGPKIDI---QIMDALRRPHQCATIQLD----FQLPIRFNLNY 470 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + + G R++A + E+ + Sbjct: 471 VTGEGDEKKRPVIIHRAILGS-VERMIAILTENYGGKWPLWLSPRQVMILAV-------S 522 Query: 359 QVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + E + R+ + G V + D G + + A L + ++VG K ++ V Sbjct: 523 SKYDEYAESVRLRMHEAGIQVDLEKDPGLTLNKKIRTAQLEQYNFILVVGEKEETNGTVN 582 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNNRP 447 I+ R + +++++ VI+ H Sbjct: 583 IRTRDNKVHGELTVQAVIDRLLHLVKIRHQ 612 >gi|57167588|ref|ZP_00366728.1| prolyl-tRNA synthetase [Campylobacter coli RM2228] gi|57020710|gb|EAL57374.1| prolyl-tRNA synthetase [Campylobacter coli RM2228] Length = 569 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 109/271 (40%), Positives = 161/271 (59%), Gaps = 4/271 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 2 MKFSKLYAPSLKEAPKDATLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIRTIVKEE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 62 MDKAGAQEVNLSFVTPATLWQESGRYNVFGKELLRFKDRKENDFVLGPTHEEAMLSLVKN 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E ++ M+ + Sbjct: 122 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLTREFDLMYKT 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I R+GL+ + A+SG IGG S EF+VLA GE + ++ D+ E Sbjct: 182 YSQILQRMGLEFRAVDADSGAIGGSGSKEFMVLAKNGEDDILICENC-DYAANVEAAI-- 238 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 + E+ A YA+ + K ++L Sbjct: 239 -RANKTCEEERPEANYASKFHTPDVKTIEAL 268 Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 6/224 (2%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATS---DVHNEKLFDSLPEN--KRVSA 279 ++D + E + + + D+ K D + K + Sbjct: 347 DFYLDKELEGEKQMIMGANEKDYHLIGIDVVNLSKDRFKDLAEVKENDCCAKCGGKLKLS 406 Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF G KYS M+A F +GK MG YGIG R++A IE++HD KG I Sbjct: 407 KGIEVGHIFKLGQKYSKAMNANFLDENGKSKPFYMGCYGIGVSRLLAVAIEANHDEKGCI 466 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W ++APF + +I D+ + K+Y LS G +V DD E+ G + +L+G Sbjct: 467 WNKTLAPFTLEIIISNIKDEKSLEFATKLYEDLSNAGIEVLLDDRNERFGVKMNDFELMG 526 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 FP ++VG K + ++E R T ++ +S +E ++ Sbjct: 527 FPYALVVG-KGLEKDELEFIDRKTLEKKIISSKEAFDFIKKSIE 569 >gi|259507396|ref|ZP_05750296.1| threonine--tRNA ligase [Corynebacterium efficiens YS-314] gi|259165021|gb|EEW49575.1| threonine--tRNA ligase [Corynebacterium efficiens YS-314] Length = 699 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 60/458 (13%), Positives = 133/458 (29%), Gaps = 49/458 (10%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 + +Y + + RD +L L + + G+ + P G + R Sbjct: 263 KLDEYQTMLAEAEKRDHRRLGTELDLFS-FPDEIGSGLPVFHPNGAIVRLEMEEHSRRRH 321 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL------------ADRNDKAMIYGPT 109 + G ++ P +DL+ +SG Y + M + + P Sbjct: 322 IQAGYSFVNTPHATKSDLFEKSGHLGFYKEGMFPPLQLDAEYDAEGNQTKPGQDYYLKPM 381 Query: 110 HEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPE 168 + + IF S +SYR LP ++ +R E G+ R+R F DA+ + T + Sbjct: 382 NCPMHNLIFDSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYC-TED 440 Query: 169 GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFM 228 + + + + GL + + + + Sbjct: 441 QLEEELTSVLEFIISLLKDYGLDDFYLELST----------------KDPKKFVGDDEIW 484 Query: 229 DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIF 288 + + + A Y + + D++ ++S ++ F Sbjct: 485 ERSTEILQRVATNSGLDLVPDPEGAAFYGPKI---SVQAKDAIGRTWQMSTVQLD----F 537 Query: 289 YFGTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 ++ + DG + G++ V+ + G W Sbjct: 538 NLPERF----ELEYTSPDGSKQRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVV 593 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 I + + EK+ +L G D +++ + P ++ G Sbjct: 594 GIPVA------EDFIPHLEKVVDKLRARGFRAEVDTSDDRMQKKIRTHTTGKIPFMLLAG 647 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 + V V + + ++E + S Sbjct: 648 GRDVEADAVSFRFLDGTQVNGVPVDEAVELISTWILER 685 >gi|296271847|ref|YP_003654478.1| threonyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299] gi|296096022|gb|ADG91972.1| threonyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299] Length = 602 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 68/437 (15%), Positives = 147/437 (33%), Gaps = 41/437 (9%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 ++ +L+E RD +L L T G+ WLP G + + I+ + G Sbjct: 197 YVKMLEEAKKRDHRKLGTELELFT-FSDDVGAGLPMWLPNGARLRSKLEHILYKAHRVRG 255 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 + P + + +W SG +Y + M +++ P + IF++ + SY Sbjct: 256 YEPVRGPEILKSKMWDISGHNANYSQNMYYTT-IDEQQYAMKPMNCVGHIQIFKNSLVSY 314 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 ++LP ++ + R E+ G+ R REF D++ F + + + Sbjct: 315 KDLPKKLFEYGVVHRHEMSGAMHGLFRVREFTQDDSHIFCTQDQMKDVIFEVL------- 367 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 ++ D +E V T + F + D+ Sbjct: 368 ----------EFVDAVLKLFDFKYEIEV--STKPEKAIGDDMFWEKTTKGIMDALDEKNI 415 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 I E A Y D+ K+ D++ + +++ F A + Sbjct: 416 TYGIDEGGGAFYGPKIDI---KILDAIGRKWQCGTVQVDMNLPSRF--------EAEYIN 464 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 G+ + +G+ ++ G+ + + + Sbjct: 465 EKGEKEQPVMIHRAILGSFERFIGILTEHCAGEFPFVIAPTQVIFVPIA------DTHNE 518 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ L + D +M E + + +A+ P+ V++G + V + V ++ R Sbjct: 519 YAKELQNELLQNSMDSKIFNMNESLNKRIRMAEKQRVPMIVVIGDEEVENKTVALRDRRK 578 Query: 424 GIREDMSLEEVINYASH 440 + +M E I + Sbjct: 579 REQSNMGKTEFIQMLNE 595 >gi|15674109|ref|NP_268284.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] gi|81856528|sp|Q9CDT4|SYP_LACLA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|12725184|gb|AAK06225.1|AE006441_3 prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] Length = 616 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 111/282 (39%), Positives = 163/282 (57%), Gaps = 11/282 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH L++R G + Q S GIY++LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALLMRAGYVRQVSAGIYAYLPLANRVLEKLKNIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ P+L +ADLW ESGRYD+YG+++ +L +R++ I GPTHEE MT + R Sbjct: 61 FDEIGAVELLAPSLLTADLWRESGRYDTYGEDLYKLKNRDNSDFILGPTHEETMTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI KFRDE RPR+G++R REFLMKD YS+ + +YN + Sbjct: 121 EITSYKKLPLNVYQIAPKFRDEKRPRYGLLRGREFLMKDGYSYHADQDSLDETYNDYKKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT----GETQVFCSKDFMDFPIPS-- 234 Y +IF R GL P+ A++G +GG S EFI + D + V IP Sbjct: 181 YEKIFERAGLNFKPIIADAGAMGGKDSQEFIAITDDRINLEKWLVLSKNITSIEEIPESV 240 Query: 235 -----ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 E I ++IV YAA ++ + + ++ Sbjct: 241 LSEIKEELGKWLIAGEDTIVYAEGGDYAANIEMASSQFEPNV 282 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 14/188 (7%) Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 NE ARGIE+GHIF GT+Y+ M+A A+G+ + MG YGIG R Sbjct: 425 NEGEISPDGRGTLKFARGIEIGHIFKLGTRYTEAMNANILDANGRSIPMLMGCYGIGVSR 484 Query: 324 VVAAVIESSHD-------------GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 +++A++E I +P +APF I L+ + D+ + ++ Sbjct: 485 LLSAILEQFARIYVEKTPREEFKFSWSINFPKELAPFDIHLVPVNVKDEAAMELTSELEE 544 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +L G V DD E+ G +FA +DL+G P++V +G K ++ VE+K R TG +++ Sbjct: 545 KLRGKGYQVLVDDRNERAGVKFADSDLIGLPVRVTIGKK-AAEGVVEVKIRATGEVVEIN 603 Query: 431 LEEVINYA 438 +E++N Sbjct: 604 KDELVNTI 611 >gi|118471368|ref|YP_887250.1| threonyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155] gi|166225464|sp|A0QWG2|SYT_MYCS2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|118172655|gb|ABK73551.1| threonyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155] Length = 684 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 64/449 (14%), Positives = 134/449 (29%), Gaps = 47/449 (10%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 I + RD +L L + + G+ + P G + R + G + Sbjct: 254 IEEAQRRDHRKLGVELDLFS-FPDELGSGLPVFHPRGGVVRRELEDYSRRKHLEAGYEFV 312 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDI 117 + P + L+V SG + Y M + + P + + I Sbjct: 313 NTPHITKEQLYVTSGHLEWYADGMFPAMHIDAEYDADGQVRKPGQNYYLKPMNCPMHHLI 372 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 FRS +SYR LP ++ +R E G+ R R DA+ + + + Sbjct: 373 FRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYTTREQMRDEL-TR 431 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + L + GL + + + S + + + Sbjct: 432 LLEFVLSLLKDYGLDDYYLELST----------------KDPEKYVGSDEIWEEATETLR 475 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + A Y + ++ D+L + ++S ++ F ++ L Sbjct: 476 EVAEASGLDLVPDPGGAAFYGPKI---SVQVKDALGRSWQMSTIQLD----FNMPDRFEL 528 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 +A + V + G++ V+ + G W V I + Sbjct: 529 EYTAA---DGSRRRPVLIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPVA---- 581 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 E++ A+L G V D +++ + + P ++ G K V Sbjct: 582 --DAHTPYLEEVAAQLKSRGVRVEVDSSDDRMAKKIVNHTNMKVPFMLLAGDKDAEAGAV 639 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 + + +E + ++ Sbjct: 640 SFRFGDRTQINGVPRDEAVEMIVRWIADR 668 >gi|301767961|ref|XP_002919352.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial-like [Ailuropoda melanoleuca] Length = 718 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 87/451 (19%), Positives = 145/451 (32%), Gaps = 57/451 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD L H+ S G +LP G + + + A IR E R G E+ PTL Sbjct: 300 RDHRRIGKAQELF--FFHELSPGSCFFLPRGTRVYNTLVAFIRAEYTRRGFSEVKTPTLF 357 Query: 76 SADLWVESGRYDSYGKEMLR----------------LADRNDKAMIYGPTHEEVMTDIFR 119 SA LW SG ++ Y ++M + P + +F Sbjct: 358 SAKLWELSGHWEHYQEDMFTLQPPGSDRLASSPSDHPTSHPTDTLALKPMNCPAHCLMFA 417 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 +S+R LP R E G+ R R F DA+ F P+ + Sbjct: 418 HRPRSWRELPLRLADFGALHRAEASGSLGGLTRLRCFQQDDAHIFCA-PDQLEAEIRSCL 476 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 ++ LG + P G D Sbjct: 477 DFLRSVYAVLGFSFRLA-LSTRPSGF-----------------LGEPCVWDQAEQVLQRA 518 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 ++ + A Y DVH L D+L + ++ F ++ Sbjct: 519 LEEFGEPWDLNPGDGAFYGPKIDVH---LRDALGRPHQCGTIQLD----FQLPLRF---- 567 Query: 299 SATFKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 +KG G + +G++ + V+ + G WP ++PF++ +I + Sbjct: 568 GLQYKGQAGVPERPVLIHRAVLGSVERMLGVLA---ESCGGKWPLWLSPFQVVVIPVGTE 624 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + ++ RL G D D+G + + A L + Q +VG K S V Sbjct: 625 QE---EYAREVQQRLQAAGLVCDLDADLGLTLSRRVRRAQLTHYNFQFVVGQKEQSKRTV 681 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 I+ R + L E + + P Sbjct: 682 NIRTRDNHRLGERDLTEAVQRLLELQNTRVP 712 >gi|281352894|gb|EFB28478.1| hypothetical protein PANDA_008019 [Ailuropoda melanoleuca] Length = 718 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 87/451 (19%), Positives = 145/451 (32%), Gaps = 57/451 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD L H+ S G +LP G + + + A IR E R G E+ PTL Sbjct: 300 RDHRRIGKAQELF--FFHELSPGSCFFLPRGTRVYNTLVAFIRAEYTRRGFSEVKTPTLF 357 Query: 76 SADLWVESGRYDSYGKEMLR----------------LADRNDKAMIYGPTHEEVMTDIFR 119 SA LW SG ++ Y ++M + P + +F Sbjct: 358 SAKLWELSGHWEHYQEDMFTLQPPGSDRLASSPSDHPTSHPTDTLALKPMNCPAHCLMFA 417 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 +S+R LP R E G+ R R F DA+ F P+ + Sbjct: 418 HRPRSWRELPLRLADFGALHRAEASGSLGGLTRLRCFQQDDAHIFCA-PDQLEAEIRSCL 476 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 ++ LG + P G D Sbjct: 477 DFLRSVYAVLGFSFRLA-LSTRPSGF-----------------LGEPCVWDQAEQVLQRA 518 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 ++ + A Y DVH L D+L + ++ F ++ Sbjct: 519 LEEFGEPWDLNPGDGAFYGPKIDVH---LRDALGRPHQCGTIQLD----FQLPLRF---- 567 Query: 299 SATFKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 +KG G + +G++ + V+ + G WP ++PF++ +I + Sbjct: 568 GLQYKGQAGVPERPVLIHRAVLGSVERMLGVLA---ESCGGKWPLWLSPFQVVVIPVGTE 624 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + ++ RL G D D+G + + A L + Q +VG K S V Sbjct: 625 QE---EYAREVQQRLQAAGLVCDLDADLGLTLSRRVRRAQLTHYNFQFVVGQKEQSKRTV 681 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 I+ R + L E + + P Sbjct: 682 NIRTRDNHRLGERDLTEAVQRLLELQNTRVP 712 >gi|195953061|ref|YP_002121351.1| prolyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1] gi|226701299|sp|B4U8B2|SYP_HYDS0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|195932673|gb|ACG57373.1| prolyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1] Length = 565 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 100/227 (44%), Positives = 145/227 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YFL +E P + E ASH+ + + G I Q + GIY P+ + L + I+R+E Sbjct: 1 MRWSRYFLYTTKEEPSETEAASHRFLTKAGFIKQVASGIYELTPIAFRVLKKIENIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+ + L A+LW E+GR+D YG E+ +L DR+D+ GPTHEE +TD+ R Sbjct: 61 MDKAGAQELLLTILNPAELWKETGRWDYYGNELFKLKDRSDRDYCLGPTHEEEITDLVRK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQI KFRDE RPR+G++R REF+MKDAYSFD E +K+SY+ M + Sbjct: 121 TVRSYKQLPLNLYQIHTKFRDEKRPRYGLIRGREFIMKDAYSFDTDEESAKNSYDIMVKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 Y IF RL L + ++A+ G IGG SHEF+ + GE + ++ Sbjct: 181 YKNIFKRLNLNILMVKADVGQIGGKSSHEFVAITKYGEALIAYCENC 227 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 71/221 (32%), Positives = 112/221 (50%), Gaps = 3/221 (1%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN--KRVSARGI 282 + +D + + + + + + DV + D PE A+G+ Sbjct: 342 EIIVDNSLYNASNMVVAFNKPHYHYKNANIDFENFVDVAQVEENDPCPECGSPLKVAQGL 401 Query: 283 EVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 E+GH F GT+YSLPM A F DG + V MG YGIG R++AA++E HD KGI WP Sbjct: 402 ELGHTFLLGTRYSLPMKAFFTDKDGVEKPVVMGCYGIGISRLIAALVEQYHDEKGIKWPL 461 Query: 343 SVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPL 402 VAPF++ + + D + E +Y L++ G +V +DD G +F ADL+G P Sbjct: 462 PVAPFQVLISCVNTSDDIQYSTSEHLYKSLTQEGIEVLFDDRDVSPGVKFNDADLIGIPY 521 Query: 403 QVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 +++VG K D VE+ R T D+ +++V++Y + Sbjct: 522 RIVVGKK-AKDGLVEVVDRHTLKAVDVPIDKVLDYIKDILN 561 >gi|313126275|ref|YP_004036545.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Halogeometricum borinquense DSM 11551] gi|312292640|gb|ADQ67100.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Halogeometricum borinquense DSM 11551] Length = 641 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 70/439 (15%), Positives = 134/439 (30%), Gaps = 46/439 (10%) Query: 12 QENPRDAEIASHKLMLRTGMIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD ++ L + I + G+ + P G++ L ++ + Sbjct: 237 EAEERDHRKIGREMDLFS--IPEVTGPGLPLYHPNGKRILSELSEFAESLNLDADYEPVE 294 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P L +LW +SG YD+Y +M L D ND+ P + IF + SYR+LP Sbjct: 295 TPHLFRTELWKKSGHYDNYVDDMF-LLDVNDEEYGLKPMNCPGHATIFDQNSWSYRDLPV 353 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 +++ +R E R G+ R F + D + F + + M Y Sbjct: 354 RYFEDGKVYRKEQRGELSGLSRVWSFTIDDGHLFCRPEQIEQEIRQVMNSIYEV------ 407 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 ++ + E V T + S + + + ++ + Sbjct: 408 -------LDTFGL------EAHVALATRPEKSVGSDEIWEQSESQLRSVLENQNIDYDLE 454 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D E D+L ++ T+ G D ++ Sbjct: 455 PGDGAFYGPKIDFSFE---DALGRKWDGPTVQVDFNMP--------ERFDLTYTGEDNEE 503 Query: 310 HYV-QMGSYGIGAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 H + G+ R +IE + + Sbjct: 504 HRPVMIHRALYGSYERFFMVLIEHFNGKFPFWLAPEQVRILPI-------SDDQLGYAHR 556 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + L V +D +G + P +IVG + ++ R + Sbjct: 557 VKNELGD--FRVSVEDRSWTLGRKIREGQEDNVPYMLIVGENEEESGTISVRDRQEREEQ 614 Query: 428 DMSLEEVINYASHRFSNNR 446 D+S++ + + R Sbjct: 615 DVSIDAFREHLEAEYDEKR 633 >gi|88807669|ref|ZP_01123181.1| prolyl-tRNA synthetase [Synechococcus sp. WH 7805] gi|88788883|gb|EAR20038.1| prolyl-tRNA synthetase [Synechococcus sp. WH 7805] Length = 598 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 110/246 (44%), Positives = 154/246 (62%), Gaps = 3/246 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P DAEI SH+L++R G I + GIY++LP+ + L +NAI+R+E Sbjct: 1 MRVSRLMLVTLRDVPADAEIPSHQLLVRGGYIRRIGAGIYAYLPMMWRVLRKINAIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + GA+E +P LQ ADLW SGR+ Y M L DR ++ + GPTHEEV+T++ Sbjct: 61 LDSLGALETLLPQLQPADLWERSGRWQGYTAGEGIMFHLEDRQNRQLGLGPTHEEVITEL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP T YQIQ KFRDE+RPRFG+MR REF+MKDAYSF + + +Y M Sbjct: 121 AGDLLRSYRQLPVTLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHANQDDLEGTYQAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y RIF R GL+++ + A+SG IGG S E++V A+ GE + S D + + T Sbjct: 181 AAAYARIFKRCGLEAVAVDADSGAIGGAASQEYMVTAEAGEDLILTSSDGLYAANQEKAT 240 Query: 238 DFDDII 243 I Sbjct: 241 SLPPIA 246 Score = 147 bits (371), Expect = 4e-33, Method: Composition-based stats. Identities = 60/179 (33%), Positives = 86/179 (48%), Gaps = 2/179 (1%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P + RGIEVGHIF G KYS + A F + G+ + MG YGIG R+ A +E Sbjct: 421 PSQTLSACRGIEVGHIFQLGRKYSEALDARFTNSAGQQEALLMGCYGIGISRLAQAAVEQ 480 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 HD GI WP +APF++ ++ K D E +Y G D DD E+ G + Sbjct: 481 HHDDAGICWPVGIAPFQVIVVIAKMKDSNQVALGEGLYQSFLDAGIDALLDDRDERAGVK 540 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH-RFSNNRPVL 449 F ADL+G P +++VG + D +VE+ R M ++ + RP + Sbjct: 541 FKDADLIGIPWRIVVG-RDAGDGEVEVVERSACKSTTMDHQKAYRQVKESILNTLRPEI 598 >gi|114600738|ref|XP_517835.2| PREDICTED: threonyl-tRNA synthetase isoform 10 [Pan troglodytes] gi|114600740|ref|XP_001153787.1| PREDICTED: threonyl-tRNA synthetase isoform 6 [Pan troglodytes] gi|114600742|ref|XP_001153971.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic isoform 9 [Pan troglodytes] Length = 723 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 147/445 (33%), Gaps = 44/445 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 306 KMLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNALIEFIRSE 363 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + P + +F Sbjct: 364 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEL-FALKPMNCPGHCLMFDH 422 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 423 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 481 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E D Sbjct: 482 FLRTVYSVFGFSFKLN-LSTRPEKFLGDIE-----------------VWDQAEKQLENSL 523 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 524 NEFGEKWELNSGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 572 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 573 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 628 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ + D D G + + A L + ++VG K V Sbjct: 629 --TCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTV 686 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 I+ R + + ++ E I Sbjct: 687 NIRTRDNKVHGERTISETIERLQQL 711 >gi|62897167|dbj|BAD96524.1| threonyl-tRNA synthetase variant [Homo sapiens] Length = 723 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 147/445 (33%), Gaps = 44/445 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 306 KMLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNALIEFIRSE 363 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + P + +F Sbjct: 364 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEL-FALKPMNCPGHCLMFDH 422 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 423 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 481 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E D Sbjct: 482 FLRTVYSVFGFSFKLN-LSTRPEKFLGDIE-----------------VWDQAEKQLENSL 523 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 524 NEFGEKWELNSGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 572 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 573 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 628 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ + D D G + + A L + ++VG K V Sbjct: 629 --TCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTV 686 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 I+ R + + ++ E I Sbjct: 687 NIRTRDNKVHGERTISETIERLQQL 711 >gi|38202255|ref|NP_689508.3| threonyl-tRNA synthetase, cytoplasmic [Homo sapiens] gi|60267755|sp|P26639|SYTC_HUMAN RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|33875537|gb|AAH00517.2| Threonyl-tRNA synthetase [Homo sapiens] gi|119631209|gb|EAX10804.1| threonyl-tRNA synthetase, isoform CRA_b [Homo sapiens] gi|158258124|dbj|BAF85035.1| unnamed protein product [Homo sapiens] gi|168277378|dbj|BAG10667.1| threonyl-tRNA synthetase [synthetic construct] gi|190690713|gb|ACE87131.1| threonyl-tRNA synthetase protein [synthetic construct] Length = 723 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 147/445 (33%), Gaps = 44/445 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 306 KMLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNALIEFIRSE 363 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + P + +F Sbjct: 364 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEL-FALKPMNCPGHCLMFDH 422 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 423 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 481 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E D Sbjct: 482 FLRTVYSVFGFSFKLN-LSTRPEKFLGDIE-----------------VWDQAEKQLENSL 523 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 524 NEFGEKWELNSGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 572 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 573 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 628 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ + D D G + + A L + ++VG K V Sbjct: 629 --TCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTV 686 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 I+ R + + ++ E I Sbjct: 687 NIRTRDNKVHGERTISETIERLQQL 711 >gi|326407711|gb|ADZ64782.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56] Length = 616 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 111/282 (39%), Positives = 163/282 (57%), Gaps = 11/282 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH L++R G + Q S GIY++LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALLMRAGYVRQVSAGIYAYLPLANRVLEKLKNIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ P+L +ADLW ESGRYD+YG+++ +L +R++ I GPTHEE MT + R Sbjct: 61 FDEIGAVELLAPSLLTADLWRESGRYDTYGEDLYKLKNRDNSDFILGPTHEETMTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI KFRDE RPR+G++R REFLMKD YS+ + +YN + Sbjct: 121 EITSYKKLPLNVYQIAPKFRDEKRPRYGLLRGREFLMKDGYSYHADQDSLDETYNDYKKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT----GETQVFCSKDFMDFPIPS-- 234 Y +IF R GL P+ A++G +GG S EFI + D + V IP Sbjct: 181 YEKIFERAGLNFKPIIADAGAMGGKDSQEFIAITDDRINLEKWLVLSKNITSIEEIPESV 240 Query: 235 -----ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 E I ++IV YAA ++ + + ++ Sbjct: 241 LSEIKEELGKWLIAGEDTIVYAEGGDYAANIEMASSQFEPNV 282 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 14/188 (7%) Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 NE ARGIE+GHIF GT+Y+ M+A A+G+ + MG YGIG R Sbjct: 425 NEGEISPDGRGTLKFARGIEIGHIFKLGTRYTEAMNANILDANGRSIPMLMGCYGIGVSR 484 Query: 324 VVAAVIESSHD-------------GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 +++A++E I +P +APF I L+ + D+ + ++ Sbjct: 485 LLSAILEQFARIYVEKTPREEFKFSWSINFPKELAPFDIHLVPVNVKDEAAMELTSELEE 544 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +L G V DD E+ G +FA +DL+G P++V +G K ++ VE+K R TG +++ Sbjct: 545 KLRGKGYQVLVDDRNERAGVKFADSDLIGLPVRVTIGKK-AAEGVVEVKIRATGEVVEIN 603 Query: 431 LEEVINYA 438 +E++N Sbjct: 604 KDELVNTI 611 >gi|255714212|ref|XP_002553388.1| KLTH0D15620p [Lachancea thermotolerans] gi|238934768|emb|CAR22950.1| KLTH0D15620p [Lachancea thermotolerans] Length = 453 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 75/447 (16%), Positives = 156/447 (34%), Gaps = 46/447 (10%) Query: 18 AEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIR-EEQNRTGAIEMSVPTLQS 76 ++++ + + M S G +LP G K + + ++ ++QN+ G E+ P + Sbjct: 35 HDVSAKQQL---FMTDPVSPGSVFFLPNGTKIFNKLVNFMKLQQQNKFGFQEVITPLIYR 91 Query: 77 ADLWVESGRYDSYGKEMLRLA--DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQ 134 LW +SG +++Y ++M R+ D + P + +F+ +SY LP + Sbjct: 92 KSLWEQSGHWENYKEDMFRVEGQDLQKEEYGLKPMNCPGHCMVFKRFARSYNELPLRYSD 151 Query: 135 IQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSI 193 R+E G+ R R+F D + F + + K + ++ Sbjct: 152 FSPLHRNEASGALSGLTRVRKFHQDDGHIFCIPEQVESE-ITKCIKMLDLCYTKVFPLGR 210 Query: 194 PMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT 253 G+ ++ + T + + + SI Sbjct: 211 ----------GNTPTDYELRLSTRPEHYVGDVSVWNHAEAILEGILNKSGKVWSINAGDG 260 Query: 254 APYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV- 312 A Y DV L D + +V+ ++ F ++ +K D Sbjct: 261 AFYGPKIDVL---LADHNNKQHQVATIQLD----FQLPERFD----LKYKDKDNTFKRPI 309 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 + G++ A++ D WP + P + ++ + ++ + L Sbjct: 310 MIHRAVFGSVERFMAMLI---DSNEGKWPFWLNPHQCMIVPLNTKNEALVHKANDLARAL 366 Query: 373 S-------------KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +V DD E G + A + ++VG+K + K I+ Sbjct: 367 RGEDTPADEPVKLNSFHFNVDIDDRAEPTGYRIKEAIEKNYSFLIMVGTKEIESGKYAIR 426 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 R + E ++L+E+I S+ SN + Sbjct: 427 TRESRDLEHLTLDEIIQKFSNLESNFK 453 >gi|154175003|ref|YP_001408388.1| prolyl-tRNA synthetase [Campylobacter curvus 525.92] gi|166980112|sp|A7GYU6|SYP_CAMC5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|112802606|gb|EAT99950.1| prolyl-tRNA synthetase [Campylobacter curvus 525.92] Length = 567 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 99/260 (38%), Positives = 143/260 (55%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK++ P +E P+DA + SH ++R G + Q G+Y++LPLG+ LD + +++EE Sbjct: 1 MRFSKFYAPTTKEAPKDASLPSHIFLVRGGFVEQIGSGLYNFLPLGKMMLDKITKVVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G +E+S + S +LW +SGR++ +GKE+LR DR + + PT+EE + R Sbjct: 61 MDAAGVLEVSFSVVTSGELWKQSGRFNVFGKELLRFKDRKENDFVLSPTNEEAAVALVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQI KFRDE RPRFG++R REF MKDAYSF K ++ M + Sbjct: 121 KVTSYKQLPLNIYQINTKFRDEARPRFGLLRGREFTMKDAYSFHANEADMKREFDLMEAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF RLGL + A+SG IGG S EF+VLA GE + C Sbjct: 181 YSKIFTRLGLNFRAVEADSGAIGGSGSKEFMVLAKNGEDDILCCDSCKYAANVEAAKRAK 240 Query: 241 DIISLNSIVEQWTAPYAATS 260 + T Y + Sbjct: 241 KTSDAPAPQADATKFYTPDA 260 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 3/184 (1%) Query: 261 DVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ + + D P+ K ++GIEVGHIF G KYS M ATF +GK MG YG Sbjct: 384 DLVSVQAGDICPKCGGKLELSKGIEVGHIFQLGYKYSSAMGATFLDENGKARPFLMGCYG 443 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R++A ++E+SHD +G +W PF+ ++ D+ K+Y L +G Sbjct: 444 IGVSRLIAVMVEASHDDRGCVWKKECTPFECEIVISNLKDEAGVKFATKLYENLRNLGLC 503 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G + +LLGFP +IVG K + + +VE+ R ++E + +E+++ Sbjct: 504 VLLDDRNERFGVKMNDFELLGFPYAIIVG-KGLENGEVELITRDGLVKEVVKKDEILSVL 562 Query: 439 SHRF 442 + Sbjct: 563 KEKL 566 >gi|296117779|ref|ZP_06836362.1| threonine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306] gi|295969010|gb|EFG82252.1| threonine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306] Length = 691 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 59/449 (13%), Positives = 136/449 (30%), Gaps = 47/449 (10%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD +L L + G+ + P G + R G + Sbjct: 259 MEEAEKRDHRRLGAELDLFS-FPDDLGSGLPVFHPNGGIVRTEMEEHSRRRHIEAGYSFV 317 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDI 117 + P + DL+ SG Y M + + P + + I Sbjct: 318 NTPHITKQDLFERSGHLGFYKDGMFPPMHVDAEYDAEGNETKPGQDYYLKPMNCPMHNLI 377 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 F + +SYR LP ++ +R E G+ R+R F DA+ + T + + Sbjct: 378 FDTRGRSYRELPLRLFEFGNVYRYEKSGVIHGLTRARGFTQDDAHIYC-TEDQLEEELTS 436 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + + + GL + + S++ + Sbjct: 437 VLDFIISLLQDYGLDDFYLELSTRDPNKS----------------VGSEEIWERSTAILA 480 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + + A Y + + D++ ++S ++ F +++L Sbjct: 481 RVAEKSGLELVPDPEGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FNMPERFNL 533 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 +A+ K + + G++ V+ + G W I + Sbjct: 534 EYTAS---DGSKKQPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVVGIPV----- 585 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + E++ A+L K G D +++ + P ++ G++ + V Sbjct: 586 -SEDNVGHLEQVIAKLCKKGIRADVDTSDDRMQKKIRNHTTGKVPFMLLAGARDAEANAV 644 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 + + ++E + ++ + Sbjct: 645 SFRFLDGSQANGIDVDEAVELIANWVAQR 673 >gi|281492788|ref|YP_003354768.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147] gi|281376440|gb|ADA65926.1| Prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147] Length = 616 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 111/282 (39%), Positives = 163/282 (57%), Gaps = 11/282 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH L++R G + Q S GIY++LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALLMRAGYVRQVSAGIYAYLPLANRVLEKLKNIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ P+L +ADLW ESGRYD+YG+++ +L +R++ I GPTHEE MT + R Sbjct: 61 FDEIGAVELLAPSLLTADLWRESGRYDTYGEDLYKLKNRDNSDFILGPTHEETMTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI KFRDE RPR+G++R REFLMKD YS+ + +YN + Sbjct: 121 EITSYKKLPLNVYQIAPKFRDEKRPRYGLLRGREFLMKDGYSYHADQDSLDETYNDYKKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT----GETQVFCSKDFMDFPIPS-- 234 Y +IF R GL P+ A++G +GG S EFI + D + V IP Sbjct: 181 YEKIFERAGLNFKPIIADAGAMGGKDSQEFIAITDDRINLEKWLVLSKNITSIEEIPESV 240 Query: 235 -----ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 E I ++IV YAA ++ + + ++ Sbjct: 241 LSEIKEELGKWLIAGEDTIVYAEGGDYAANIEMASSQFEPNV 282 Score = 147 bits (372), Expect = 3e-33, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 14/188 (7%) Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 NE ARGIE+GHIF GT+Y+ M+A A+G+ + MG YGIG R Sbjct: 425 NEGEISPDGRGTLKFARGIEIGHIFKLGTRYTEAMNANILDANGRSIPMLMGCYGIGVSR 484 Query: 324 VVAAVIESSHD-------------GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 +++A++E I +P +APF I L+ + D+ + ++ Sbjct: 485 LLSAILEQFARIYVEKTPREEFKFSWSINFPKELAPFDIHLVPVNVKDEAAMELTSELEE 544 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +L G V DD E+ G +FA +DL+G P++V +G K ++ VE+K R TG +++ Sbjct: 545 KLRGKGYQVLVDDRNERAGVKFADSDLIGLPVRVTIGKK-AAEGVVEVKIRATGEVVEIN 603 Query: 431 LEEVINYA 438 +E++N Sbjct: 604 KDELVNTI 611 >gi|237752688|ref|ZP_04583168.1| prolyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430] gi|229376177|gb|EEO26268.1| prolyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430] Length = 582 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 110/260 (42%), Positives = 162/260 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK F+P +E P+D + SH+ ++R G I Q GIY++LPLG++ LD + +I++EE Sbjct: 1 MRFSKIFIPTFKEAPKDVVLKSHEYLIRGGFIQQIGSGIYNFLPLGKRVLDKIKSIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+++ + A+LW +SGR++ YGKE+LR DR D A + GPTHEEV+T++ ++ Sbjct: 61 MDNAGANEVTLGFVTPANLWQKSGRFERYGKELLRFNDRKDNAFVLGPTHEEVITELVKA 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ LP YQI LKFRDE+RPRFG+MR+REF+MKD YSF E K ++ M + Sbjct: 121 NVKSYKQLPLHLYQINLKFRDEMRPRFGLMRAREFIMKDGYSFHSNFEDLKREFDLMEQT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF RLGL + A+SG IGG S EF+VLA++GE + T Sbjct: 181 YSKIFTRLGLDFRAVFADSGAIGGSGSKEFMVLANSGEDTICVCDTCYYGANLEAATRIK 240 Query: 241 DIISLNSIVEQWTAPYAATS 260 S + ++ + Sbjct: 241 AAPSFQAPQAEFAKFHTPNV 260 Score = 153 bits (387), Expect = 5e-35, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 96/189 (50%), Gaps = 4/189 (2%) Query: 256 YAATSDVHNEKLFDSLPE---NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 Y +V L E K +GIE GHIF GTKYS M ATF GK Sbjct: 387 YKDLVEVQAGDLCPLCGESKGGKLYFTKGIEAGHIFQLGTKYSSAMDATFLDESGKAQPF 446 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R+++A+IE HD KG+IW + APF + ++ D + EKIY L Sbjct: 447 IMGCYGIGVSRLLSAIIEQHHDKKGMIWTQATAPFDVDIMVSNIKDSAQLEMGEKIYTAL 506 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 +K G + DD E+ G++ A +L+GFP +I+G K + ++E+ R RE + + Sbjct: 507 NKEGIECLLDDRAERYGAKIADFELIGFPFGIIIG-KGLEKGEIELVRRKDLSREVLKVS 565 Query: 433 EVINYASHR 441 + + + Sbjct: 566 DFMALIAEL 574 >gi|123981026|gb|ABM82342.1| threonyl-tRNA synthetase [synthetic construct] gi|123995829|gb|ABM85516.1| threonyl-tRNA synthetase [synthetic construct] Length = 711 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 147/445 (33%), Gaps = 44/445 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 294 KMLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNALIEFIRSE 351 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + P + +F Sbjct: 352 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEL-FALKPMNCPGHCLMFDH 410 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 411 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 469 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E D Sbjct: 470 FLRTVYSVFGFSFKLN-LSTRPEKFLGDIE-----------------VWDQAEKQLENSL 511 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 512 NEFGEKWELNSGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 560 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 561 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 616 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ + D D G + + A L + ++VG K V Sbjct: 617 --TCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTV 674 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 I+ R + + ++ E I Sbjct: 675 NIRTRDNKVHGERTISETIERLQQL 699 >gi|114600748|ref|XP_001153418.1| PREDICTED: threonyl-tRNA synthetase isoform 2 [Pan troglodytes] gi|114600750|ref|XP_001153486.1| PREDICTED: threonyl-tRNA synthetase isoform 3 [Pan troglodytes] gi|114600752|ref|XP_001153550.1| PREDICTED: threonyl-tRNA synthetase isoform 4 [Pan troglodytes] Length = 664 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 147/445 (33%), Gaps = 44/445 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 247 KMLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNALIEFIRSE 304 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + P + +F Sbjct: 305 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEL-FALKPMNCPGHCLMFDH 363 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 364 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 422 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E D Sbjct: 423 FLRTVYSVFGFSFKLN-LSTRPEKFLGDIE-----------------VWDQAEKQLENSL 464 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 465 NEFGEKWELNSGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 513 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 514 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 569 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ + D D G + + A L + ++VG K V Sbjct: 570 --TCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTV 627 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 I+ R + + ++ E I Sbjct: 628 NIRTRDNKVHGERTISETIERLQQL 652 >gi|118474251|ref|YP_891864.1| prolyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40] gi|152016592|sp|A0RNT1|SYP_CAMFF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|118413477|gb|ABK81897.1| prolyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40] Length = 567 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 163/288 (56%), Gaps = 5/288 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ +K ++P +E P+DA + SH+ ++R G + Q G+Y++LPLG++ L V I+R+E Sbjct: 1 MKFTKLYVPTTKEAPKDATLPSHQFLIRAGFVAQIGSGLYNFLPLGKRVLRKVENIVRDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + +LW +S RY +GKE+LRL DR D + PTHEE + D+ R Sbjct: 61 MDKAGANEVALSFVVPGELWKQSRRYFKFGKELLRLKDRKDNDFLLAPTHEESIVDLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQI LKFRDE RPRFG++R REF+MKD YSF + K ++ M + Sbjct: 121 KVTSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFIMKDGYSFHASEADLKREFDLMETT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-----SKDFMDFPIPSE 235 Y +IF RLGL + A+SG IGG S EF+VLA GE + ++ ++ Sbjct: 181 YTKIFSRLGLNFRAVEADSGAIGGSGSKEFMVLAKNGEDDILISDASNYAANIEAAKRAK 240 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 + NS+ + +T ++ + V D K V + I Sbjct: 241 RVCKAERPQSNSMQKFFTPGCSSIAKVTEFFKVDPFYTIKAVMKKAIY 288 Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats. Identities = 76/269 (28%), Positives = 113/269 (42%), Gaps = 15/269 (5%) Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLAD--TGETQVFCSKDFMDFPIPSENTDFDDII 243 + A S D S E ++ A G + +DF I +E ++ Sbjct: 302 DDELQEVKACNACSALELSDASEEEVIAAGLVPGYCGPVGLHENIDFYIDNELE--NEKE 359 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENK----------RVSARGIEVGHIFYFGTK 293 + E+ N+ F L E K +GIEVGHIF G + Sbjct: 360 MICGANEKDYHAIGVNIINFNKDRFKDLAEVKAGDKALDGGVLSVTKGIEVGHIFQLGVR 419 Query: 294 YSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 YS M ATF +GK MG YGIG R+VA ++E+SHD KG IW APF + +I Sbjct: 420 YSETMGATFLDENGKSKPFFMGCYGIGVSRLVAVMVEASHDEKGCIWKKECAPFMVHIIV 479 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 D + + L G +V DD E+ G + A +L+G P V+VG K + + Sbjct: 480 SNIKDTEQMQFALNLESNLESSGVEVLLDDRNERFGVKMADFELIGVPFGVVVG-KGLQN 538 Query: 414 SKVEIKHRLTGIREDMSLEEVINYASHRF 442 ++VE R + +S +E++ Sbjct: 539 AEVEFIKRDGLEKVKVSSDEILGKLKEII 567 >gi|257867713|ref|ZP_05647366.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257874040|ref|ZP_05653693.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC10] gi|257876619|ref|ZP_05656272.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC20] gi|257801796|gb|EEV30699.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257808204|gb|EEV37026.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC10] gi|257810785|gb|EEV39605.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC20] Length = 569 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 98/234 (41%), Positives = 148/234 (63%), Gaps = 1/234 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE SH+L++R G I Q + GIY +LPL Q+ L+ + +IREE Sbjct: 1 MKQSKCLIPTLRETPSDAETLSHQLLVRAGYIRQVAAGIYVYLPLAQRVLEKIKRVIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+EM++P+L + W ESGR YG+ + RL DRN++ ++ GPTHEE T + ++ Sbjct: 61 LAQIDAVEMAMPSLLPYEPWKESGRASLYGESLYRLTDRNEREIVLGPTHEEPFTTLIKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP + YQIQ K+RDE RPRFG++RSREF+M+D YSF +YN+ ++ Sbjct: 121 EITSYKRLPLSLYQIQTKYRDEQRPRFGLIRSREFIMQDGYSFHADEASLDQTYNRYEMA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS 234 Y I R G++ + ++G +GG S EF+ L+ GE ++ C D+ Sbjct: 181 YHAILKRCGIEYRAVVGDNGLMGGRDSKEFLALSGIGE-ELICYSTESDYVANW 233 Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 100/189 (52%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 A +D + D P+ K RGIEVGHIF GTKYS AT +G + + MG Sbjct: 380 AFADFRLVQEGDPSPDGKGTLTFTRGIEVGHIFKLGTKYSEAQEATVVDENGDEQPIIMG 439 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YG+G R+++ ++E + GI WP +APF + +I D E++ +++V Sbjct: 440 CYGLGVSRLLSTIVEQYGNEFGIDWPQEIAPFDVHIIQTSIEDSYQNALSEEVEEMMNQV 499 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G V DD E+ G +FA ADL+G P+++ +G K V VEIK + TG ++ EEV Sbjct: 500 GYQVLVDDRNERAGVKFADADLIGCPIRLTIGKKAVE-GIVEIKIKHTGATVEVRKEEVA 558 Query: 436 NYASHRFSN 444 + + +N Sbjct: 559 STLTILLAN 567 >gi|269958355|ref|YP_003328142.1| threonyl-tRNA synthetase [Anaplasma centrale str. Israel] gi|269848184|gb|ACZ48828.1| threonyl-tRNA synthetase [Anaplasma centrale str. Israel] Length = 636 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 73/438 (16%), Positives = 144/438 (32%), Gaps = 40/438 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 + Y + + RD + L I + G W G + IR + Sbjct: 230 LASYIHNMQEAEKRDHRKIAKDLGWF--HIQNEALGQVFWHDKGWVIYRTIEEYIRCKLE 287 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G +E+ P + LW +SG ++ + + M + + + K + P + IF+S I Sbjct: 288 KHGYLEVKTPIMLDRKLWEKSGHWEKFKENMF-VVENDKKELAIKPMNCPCHVQIFKSKI 346 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY+ LP + + R+E +G+MR R F DA+ F + + + Sbjct: 347 RSYKELPIRMAEFGMCHRNEPSGSLYGLMRVRGFTQDDAHIFCTHEQVRDE-VLRFYELL 405 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ G S+ ++ P S E D S + Sbjct: 406 MEVYKDFGFDSVTVKLSDRPENRIGSDE-----------------IWDRSEQSLMEPMNA 448 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + +I + A Y + L DS+ + ++ G A Sbjct: 449 LGVQYTINKGEGAFYGPKLEF---TLKDSIGREWQCGTVQLDFVLPDRLG--------AY 497 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G DGK H + +G + ++ + G +W + I Sbjct: 498 YIGEDGKKHIPVIIHRAILGTIERFIGILIEHYAGNIPVW------LAPVQLEILTVSGE 551 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + + + V + E I + A P+ +VG D V ++ Sbjct: 552 VEEYARGLMEMALQKNVRVELNSTEENISHKIRKAIFNKVPIVWVVGKSEAGDGCVSVRR 611 Query: 421 RLTGIREDMSLEEVINYA 438 +G M+ ++ + Sbjct: 612 YGSGETCRMAADKALKTL 629 >gi|317057674|ref|YP_004106141.1| threonyl-tRNA synthetase [Ruminococcus albus 7] gi|315449943|gb|ADU23507.1| threonyl-tRNA synthetase [Ruminococcus albus 7] Length = 648 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 76/445 (17%), Positives = 142/445 (31%), Gaps = 38/445 (8%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L ++E RD +L T + +G+ LP G K + + I +E+ + G Sbjct: 233 LKQMEEAKLRDHNKLGRELEYFTT-VDYIGQGLPILLPKGAKVIQTLQRWIEDEEYKRGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEML---RLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 P + +L+ SG +D Y M D + P +F + + Sbjct: 292 QLTKTPFMSKRELYKISGHWDHYRDGMFILGDPDDETKECFALRPMTCPFQYQVFLNRKR 351 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + FR+E G++R R+F + + + L PE + + Sbjct: 352 SYRDLPMRLGETSTLFRNEDSGEMHGLIRVRQFTISEGH-LILRPEQLEEEFKGCLDLAK 410 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPSENTDFDD 241 E+ + D+S+ F + + + + + DD Sbjct: 411 YC------------LETIGLAEDVSYRFSQWDPANPNNKYEGTAEQWEEAQGAMKKILDD 458 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I I A Y D+ + +F + + I++ + + Sbjct: 459 IGLDYEIGIDEAAFYGPKLDIQIKNVF---GKEDTLITIQIDM--------QIAKKFGME 507 Query: 302 FKGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + DGK + +G A++ + G +W + + Sbjct: 508 YVDKDGKMKMPYIIHRTSVGCYERTLALLIEKYAGVLPLWLAPEQVRILPIKP------E 561 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D + + +G V D + IG + A P I+G V D V ++ Sbjct: 562 HNDYAYDLAEEMRDLGMRVEVDAEDDNIGPKIKQARFDRVPYMFIIGDNEVKDGTVTVRS 621 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R G M + I Sbjct: 622 RKEGELPAMPAADAIAKLKEEIDTK 646 >gi|52632425|gb|AAH10578.2| Threonyl-tRNA synthetase [Homo sapiens] Length = 723 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 148/445 (33%), Gaps = 44/445 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 306 KMLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNALIEFIRSE 363 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + P + +F Sbjct: 364 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEL-FALKPMNCPGHCLMFDH 422 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G++R R F DA+ F + Sbjct: 423 RPRSWRELPLRLADFGVLHRNELSGALTGLIRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 481 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E D Sbjct: 482 FLRTVYSVFGFSFKLN-LSTRPEKFLGDIE-----------------VWDQAEKQLENSL 523 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 524 NEFGEKWELNSGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 572 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 573 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 628 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ + D D G + + A L + ++VG K V Sbjct: 629 --TCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTV 686 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 I+ R + + ++ E I Sbjct: 687 NIRTRDNKVHGERTISETIERLQQL 711 >gi|237785631|ref|YP_002906336.1| threonyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385] gi|237758543|gb|ACR17793.1| Threonyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385] Length = 663 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 63/460 (13%), Positives = 135/460 (29%), Gaps = 52/460 (11%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD +L L + + G + P G + + R Sbjct: 228 EYQQRMEEAERRDHRRLGAELNLFS-FPDEIGSGFPVFHPDGGIVRNEMEQHSRRRHIEA 286 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND------------KAMIYGPTHEE 112 G + P L DL+ +SG D Y M ++ + P + Sbjct: 287 GYSFVYTPHLTKGDLFQKSGHLDFYKDGMFPPMKLDEERDAEGNITKPAQDYYAKPMNCP 346 Query: 113 VMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSK 171 + IF S +SYR LP ++ +R E G+ R+R F DA+ + T + + Sbjct: 347 MHNLIFASKGRSYRELPLRLFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYC-TEDQLE 405 Query: 172 HSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 + + + + + GL + + + S + + Sbjct: 406 NELSTVLDFIISLLKDYGLDDFYLELST----------------KDPNKFVGSDEIWERS 449 Query: 232 IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 D A Y + + D++ ++S ++ F Sbjct: 450 TEILRRVADKSGLDLVPDPGGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FNLP 502 Query: 292 TKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 ++ + DG + G++ V+ + G W I Sbjct: 503 ERF----ELEYTAPDGSKQRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVVGIP 558 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 + ++ +L G D +++ + P ++ G + Sbjct: 559 VA------DEFSPYLGEVVDKLRARGVRAEVDISDDRMQKKIRNHTTHKAPFMLLAGGRD 612 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYAS---HRFSNNRP 447 V + + +E+ ++ S +N +P Sbjct: 613 AEAGAVSFRFLDGSQVNGVPVEKAVDVISTWVEEHNNEQP 652 >gi|195440008|ref|XP_002067851.1| GK12501 [Drosophila willistoni] gi|194163936|gb|EDW78837.1| GK12501 [Drosophila willistoni] Length = 461 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 142/466 (30%), Positives = 223/466 (47%), Gaps = 47/466 (10%) Query: 2 RRSKYFLPILQENPRDAEI-------ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVN 54 R SK F P+L P+DA I S KL+ G+I S G Y +P+ Q++LD Sbjct: 3 RASKIFWPML-VKPKDAVIKQTEQLSRSQKLLTELGLIKSGSNGTYQIMPIAQRSLDKCI 61 Query: 55 AIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM 114 ++++ G ++++P L S LW +SGR + E + DR+ K + PTHEE + Sbjct: 62 NLVQQNMVEAGGQKITLPVLTSTALWKKSGRLEGDISEFYMVRDRSGKQFLMSPTHEEAV 121 Query: 115 T-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 T + + SYR LP YQI KFRDEL+ RFG+MR++EFLMKD Y+FDL+ E +K + Sbjct: 122 TAMLATAAPISYRQLPLRLYQIGPKFRDELKSRFGMMRAKEFLMKDMYTFDLSQETAKDT 181 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y+ + +Y R F +L + + + AE+G +GG LSHE+ ++ GE + + Sbjct: 182 YDIITKAYDRFFQQLEVPFVKVNAETGIMGGSLSHEYHYISSVGEDTLVKCESC------ 235 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE-NKRVSARGIEVGHIFYFGT 292 H + + + G+EV H F G Sbjct: 236 --------------------GFAGNAEVFHQSSNCPNCQKADNLSQVHGVEVAHTFLLGD 275 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 KYS P+ ATF GK + MG YGIG RV+AA +E + + WP +AP+ + +I Sbjct: 276 KYSKPLGATFLNTSGKPQSLIMGCYGIGLSRVLAASLEVLSTDQELRWPKLLAPYDVCVI 335 Query: 353 NIKAHDQVCRDACEKI-YARLSKVG-C----DVFWDDM-GEQIGSQFAVADLLGFPLQVI 405 K + E++ Y L +G +V DD IG + LG P ++ Sbjct: 336 GPKQGSKEQT-LAERVEYNLLEHLGDICGSDEVLHDDRKDLTIGKRLLDGKRLGHPFIIV 394 Query: 406 VGSKFV--SDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 G+K V D ++E+ G + +++L E + + S + ++ Sbjct: 395 AGAKSVLPEDPRLELHS-SDGNKMELNLNEALQMVNQYVSQKKHLI 439 >gi|291398043|ref|XP_002715638.1| PREDICTED: threonyl-tRNA synthetase 2, mitochondrial [Oryctolagus cuniculus] Length = 718 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 84/451 (18%), Positives = 146/451 (32%), Gaps = 57/451 (12%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD + L H+ S G +LP G + + + A IR E G E+ PTL Sbjct: 300 RDHRRIGKEQELF--FFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEVKTPTLF 357 Query: 76 SADLWVESGRYDSYGKEML----------------RLADRNDKAMIYGPTHEEVMTDIFR 119 S LW +SG ++ Y ++M + + P + +F Sbjct: 358 STKLWEKSGHWEHYKEDMFALQPSDSDSSACSQSDHPTSQPPDTLALKPMNCPAHCLMFA 417 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 +S+R LP R E G+ R R F DA+ F + Y Sbjct: 418 HRPRSWRELPLRLADFGALHRAEASGSLGGLTRLRCFQQDDAHIFCAPDQLEAEIY-GCL 476 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 ++ LG F + T + D Sbjct: 477 DFLRSVYAVLGFS------------------FHLALSTRPSGFLGEPCLWDQAEQLLQQS 518 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + + A Y DVH L D+L + ++ F ++ Sbjct: 519 LEAFGEPWDLSPGDGAFYGPKIDVH---LRDALGRPHQCGTIQLD----FQLPLRFD--- 568 Query: 299 SATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 +KG G + V + +G++ + V+ + G WP ++PF++++I + Sbjct: 569 -LQYKGQAGNLERPVLIHRAVLGSVERLLGVLA---ESCGGKWPLWLSPFQVAVIPVGTE 624 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + + ++ L G D D G + + A L + Q +VG K S+ V Sbjct: 625 QE---EYAREVQQTLQAAGLASDLDADPGLTLSRRVRRAQLAHYNFQFVVGRKEQSNRTV 681 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 ++ R + L E + P Sbjct: 682 NVRTRDNQRLGERGLAEATRRLLELQNTRVP 712 >gi|76363445|sp|Q4J9C4|SYT_SULAC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS Length = 549 Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats. Identities = 79/431 (18%), Positives = 155/431 (35%), Gaps = 36/431 (8%) Query: 17 DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS 76 D I +L L + + G+ + P GQ + + E + G E+ + Sbjct: 142 DHRIIGDRLDLFS-FPEEAPPGVVLFHPNGQIIRKEMMRFMEEINDSMGYKEVYTSHVYR 200 Query: 77 ADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 + LW SG YD Y +ML ND+ + P + I++S ++SY++LP F + Sbjct: 201 SLLWKISGHYDYYKDKMLLFEIDNDEELGIKPMNCPAHILIYKSKVRSYKDLPIRFSEFG 260 Query: 137 LKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 +R E + +G++R R F D + F + M + Sbjct: 261 HVYRWEKKGELYGLLRVRGFTQDDGHIFLREDQIKDEIKLLMKKT--------------- 305 Query: 196 RAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP 255 + I G + V T + + + + + + +++ + E+ A Sbjct: 306 -LDVLAIFGFKGDDVRVNLSTRPDESIGTDEQWNKATDALISALNELNIKYEVKEKEGAF 364 Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV-QM 314 Y D + DSL ++S ++ F ++ + DG + Sbjct: 365 YGPKIDFD---IRDSLSRWWQLSTIQVD----FNLPERF----KLEYVDKDGSKKRPVMV 413 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G++ A++ GK W ++P ++ ++ I D + A+L + Sbjct: 414 HRAIYGSIDRFMAILLEHFRGKLPTW---LSPIQVRVLPIT---DEIEDYGNSLMAKLRE 467 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 V D E + + A G P +IVG K + KV ++ R +++E+ Sbjct: 468 NKIRVDMDSGEETLSKRIKKAYDDGVPYLIIVGRKEKDEGKVTVRARGNIEIRGINVEKF 527 Query: 435 INYASHRFSNN 445 + N Sbjct: 528 VQALVEEIRNK 538 >gi|257066241|ref|YP_003152497.1| prolyl-tRNA synthetase [Anaerococcus prevotii DSM 20548] gi|256798121|gb|ACV28776.1| prolyl-tRNA synthetase [Anaerococcus prevotii DSM 20548] Length = 572 Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 107/246 (43%), Positives = 155/246 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY++P L+E+P DAE ASHK + R I + + G+YS+LPLG+K ++ + AI+RE Sbjct: 1 MRLSKYYMPTLREDPVDAETASHKFLTRGAFIRKQASGVYSFLPLGKKVINKIEAIVREA 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +IE+S LQ+ ++W SGR++++G EM +L DR+D+ GPT EE T + + Sbjct: 61 MENHDSIEVSTSILQAREIWEASGRWETFGPEMFKLKDRHDREYCLGPTAEEAFTALVKD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQI KFRDE RPRFG+ RSR+FLMKDAYSFD EG + SY KM+ + Sbjct: 121 ELNSYKQLPLNIYQIVDKFRDEKRPRFGINRSRDFLMKDAYSFDADIEGLEISYQKMWDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ F ++GL + +SG +GG SHEFI L++TGE + + D + Sbjct: 181 YVEAFDKMGLDYKIVEGDSGTMGGKKSHEFIALSETGEGVILYTDDSDYAATDEKARFKM 240 Query: 241 DIISLN 246 D + + Sbjct: 241 DFVKED 246 Score = 153 bits (387), Expect = 5e-35, Method: Composition-based stats. Identities = 70/174 (40%), Positives = 92/174 (52%), Gaps = 1/174 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 +ARGIEVG+IF GTKYS + A F +GK MGSYGIG R V+A++E Sbjct: 396 GSGMLKAARGIEVGNIFQLGTKYSESLEAYFLDENGKQKPFIMGSYGIGISRSVSAIVEQ 455 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 HD KGI+WP SVAPF+ + I + ++ EKIY RL + DV DD E+ G + Sbjct: 456 YHDDKGIVWPTSVAPFEAIVTIININKDEQKELGEKIYQRLREERIDVILDDRKERAGVK 515 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 F DL+G P ++ VG K +D VE R E +S E I + Sbjct: 516 FNDRDLIGIPYRITVG-KDAADDIVEYSTRKDMENEKISSSEAIEKIVDSIKKD 568 >gi|70607029|ref|YP_255899.1| threonyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639] gi|68567677|gb|AAY80606.1| threonine-tRNA synthetase [Sulfolobus acidocaldarius DSM 639] Length = 552 Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 79/431 (18%), Positives = 155/431 (35%), Gaps = 36/431 (8%) Query: 17 DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS 76 D I +L L + + G+ + P GQ + + E + G E+ + Sbjct: 145 DHRIIGDRLDLFS-FPEEAPPGVVLFHPNGQIIRKEMMRFMEEINDSMGYKEVYTSHVYR 203 Query: 77 ADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 + LW SG YD Y +ML ND+ + P + I++S ++SY++LP F + Sbjct: 204 SLLWKISGHYDYYKDKMLLFEIDNDEELGIKPMNCPAHILIYKSKVRSYKDLPIRFSEFG 263 Query: 137 LKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 +R E + +G++R R F D + F + M + Sbjct: 264 HVYRWEKKGELYGLLRVRGFTQDDGHIFLREDQIKDEIKLLMKKT--------------- 308 Query: 196 RAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP 255 + I G + V T + + + + + + +++ + E+ A Sbjct: 309 -LDVLAIFGFKGDDVRVNLSTRPDESIGTDEQWNKATDALISALNELNIKYEVKEKEGAF 367 Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV-QM 314 Y D + DSL ++S ++ F ++ + DG + Sbjct: 368 YGPKIDFD---IRDSLSRWWQLSTIQVD----FNLPERF----KLEYVDKDGSKKRPVMV 416 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G++ A++ GK W ++P ++ ++ I D + A+L + Sbjct: 417 HRAIYGSIDRFMAILLEHFRGKLPTW---LSPIQVRVLPIT---DEIEDYGNSLMAKLRE 470 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 V D E + + A G P +IVG K + KV ++ R +++E+ Sbjct: 471 NKIRVDMDSGEETLSKRIKKAYDDGVPYLIIVGRKEKDEGKVTVRARGNIEIRGINVEKF 530 Query: 435 INYASHRFSNN 445 + N Sbjct: 531 VQALVEEIRNK 541 >gi|325571083|ref|ZP_08146655.1| proline--tRNA ligase [Enterococcus casseliflavus ATCC 12755] gi|325156168|gb|EGC68354.1| proline--tRNA ligase [Enterococcus casseliflavus ATCC 12755] Length = 569 Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 98/234 (41%), Positives = 147/234 (62%), Gaps = 1/234 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DAE SH+L++R G I Q + GIY +LPL Q+ L+ + +IREE Sbjct: 1 MKQSKCLIPTLRETPSDAETLSHQLLVRAGYIRQVAAGIYVYLPLAQRVLEKIKRVIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A+EM++P+L + W ESGR YG+ + RL DRN++ ++ GPTHEE T + ++ Sbjct: 61 LAEIDAVEMAMPSLLPYEPWKESGRASLYGESLYRLTDRNEREIVLGPTHEEPFTTLIKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP + YQIQ K+RDE RPRFG++RSREF+M+D YSF +YN+ ++ Sbjct: 121 EITSYKRLPLSLYQIQTKYRDEQRPRFGLIRSREFIMQDGYSFHADEASLDQTYNRYEMA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS 234 Y I R G++ + ++G +GG S EF+ L+ GE ++ C D+ Sbjct: 181 YHAILKRCGIEYRAVVGDNGLMGGRDSKEFLALSGIGE-ELICYSTESDYVANW 233 Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 100/189 (52%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 A +D + D P+ K RGIEVGHIF GTKYS AT +G + + MG Sbjct: 380 AFADFRLVQEGDPSPDGKGTLTFTRGIEVGHIFKLGTKYSEAQEATVVDENGDEQPIIMG 439 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YG+G R+++ ++E + GI WP +APF + +I D E++ +++V Sbjct: 440 CYGLGVSRLLSTIVEQYGNEFGIDWPQEIAPFDVHIIQTSIEDSYQNALSEEVEEMMNQV 499 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G V DD E+ G +FA ADL+G P+++ +G K V VEIK + TG ++ EEV Sbjct: 500 GYQVLVDDRNERAGVKFADADLIGCPIRLTIGKKAVE-GIVEIKIKHTGATVEVRKEEVA 558 Query: 436 NYASHRFSN 444 + + +N Sbjct: 559 STLTILLAN 567 >gi|37522094|ref|NP_925471.1| prolyl-tRNA synthetase [Gloeobacter violaceus PCC 7421] gi|81834313|sp|Q7NHL0|SYP_GLOVI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|35213093|dbj|BAC90466.1| prolyl-tRNA synthetase [Gloeobacter violaceus PCC 7421] Length = 589 Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 103/243 (42%), Positives = 136/243 (55%), Gaps = 8/243 (3%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHS--KGIYSWLPLGQKALDNVNAIIRE 59 R S F L+E P +A SHKL+LR G I + G+Y++ PL Q+ L V I+RE Sbjct: 3 RLSSSFFFTLREAPAEAVAVSHKLLLRAGFIRPLAGTAGLYAYGPLMQRVLQKVGRIVRE 62 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKE--MLRLADRND---KAMIYGPTHEEVM 114 E + TGA E LQ A++W ESGR+ Y ++ M L D + GPTHEE + Sbjct: 63 EMDATGAQEALFCQLQPAEIWKESGRWTVYTQDGTMFTLKDGQGEQAREYGLGPTHEEAV 122 Query: 115 TDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSY 174 D R+ + SY+ LPF YQ+Q KFR+E RPRFG+MR REF+MKD YSF TPE +Y Sbjct: 123 CDFVRASLNSYKQLPFHLYQVQTKFRNEKRPRFGLMRGREFIMKDGYSFHATPESLDETY 182 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS 234 M+ +Y +F R GL + A+SG IGG SHEF+ L D GE + + Sbjct: 183 RAMYRAYTNMFRRCGLDFRAVEADSGAIGGSGSHEFMALCDIGEDTILYCD-AAGYAANV 241 Query: 235 ENT 237 E Sbjct: 242 EKA 244 Score = 163 bits (412), Expect = 6e-38, Method: Composition-based stats. Identities = 71/189 (37%), Positives = 100/189 (52%), Gaps = 4/189 (2%) Query: 258 ATSDVHNEKLFDSL---PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 +D+ + D PE SARG+E+GHIF GTKYS PM F G+ M Sbjct: 393 EVADLDTAQAGDHCHLAPEATLQSARGVELGHIFKLGTKYSRPMQVLFADEAGELQPALM 452 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G YG+G R+ AAV+E SHD GI+WP ++AP+++ L+ + R A E++Y L+ Sbjct: 453 GCYGVGVSRLPAAVVEQSHDNDGILWPIAIAPYQVVLVPANVAVEAQRQAAEELYRSLTA 512 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G D DD E+ G +F ADL+G PL+V +G + + VEIK R G E + L E Sbjct: 513 AGIDTLLDDRPERAGVKFKDADLIGIPLRVTLG-RDLEAGLVEIKVRGGGAAEKVPLAEA 571 Query: 435 INYASHRFS 443 + Sbjct: 572 LAQIKGLIE 580 >gi|159903050|ref|YP_001550394.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211] gi|226701318|sp|A9BED0|SYP_PROM4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|159888226|gb|ABX08440.1| Prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211] Length = 600 Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 111/240 (46%), Positives = 150/240 (62%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P DAEI SH+L++R G I + + GIY++LPL + + +N IIREE Sbjct: 1 MRVSRLMLVTLRDAPADAEIISHQLLIRGGFIKRITSGIYAYLPLMWRVIQKINCIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N G +E +P L +DLW ++GR++ Y M L DR + + GPTHEE++T I Sbjct: 61 LNAKGCLEALLPQLHPSDLWKKTGRWEGYTAGEGIMFNLKDRQGRELGLGPTHEEIITQI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + SY+ LP YQIQ KFRDE+RPRFG+MRSREF+MKDAYSF E K SY M Sbjct: 121 AGESLHSYKQLPVNLYQIQTKFRDEIRPRFGLMRSREFIMKDAYSFHANEEDLKTSYASM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y +IF R G+K++ + A+SG IGG S EF+V AD GE + SKD + E Sbjct: 181 DDAYRKIFERCGIKTVAVEADSGAIGGAASQEFMVTADAGEDLILISKDG-KYAANQEKA 239 Score = 153 bits (386), Expect = 6e-35, Method: Composition-based stats. Identities = 69/191 (36%), Positives = 94/191 (49%), Gaps = 4/191 (2%) Query: 259 TSDVHNEKLFDSL---PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 D+ K D + + RGIEVGHIF G KYS + A F G MG Sbjct: 406 VVDIRKAKPGDQCFYDNKQFLIEKRGIEVGHIFQLGRKYSSSLEANFTNEKGSSEPFWMG 465 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R+ A +E SHD GIIWP S++PF++ ++ D+V E IY +L Sbjct: 466 CYGIGVSRIAQAAVEQSHDQSGIIWPLSISPFEVIIVIANIKDEVQNRLGEDIYKQLRHK 525 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G +F ADL+G P +V+VG + S KVE+ R + + E V+ Sbjct: 526 GIDVLLDDRDERAGVKFKDADLIGIPWRVVVG-RDSSSGKVELLKRSDRSVKLIESEIVV 584 Query: 436 NYASHRFSNNR 446 S + Sbjct: 585 KELIAEISRKK 595 >gi|269956448|ref|YP_003326237.1| threonyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894] gi|269305129|gb|ACZ30679.1| threonyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894] Length = 672 Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 62/447 (13%), Positives = 125/447 (27%), Gaps = 42/447 (9%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD + L + G+ + P G + +R+ G + Sbjct: 258 EAERRDHRRIGVEQDLFSFH-ENVGSGLPLFHPKGGVIKRVMEDYVRQRHIEEGFSYVGT 316 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKA--------MIYGPTHEEVMTDIFRSHIK 123 P + DL+ SG YG M + +D + + I+ S + Sbjct: 317 PHISKEDLFYTSGHLPYYGDTMFPSMEFHDDDHPDAPALKYRLKAMNCPMHNLIYSSRGR 376 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP ++ +R E G+ R R D++S+ + + L Sbjct: 377 SYRELPIRLFEFGSVYRYEKGGVVQGLTRVRGLTQDDSHSYVTQEQAPGE-VTHLLDFML 435 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + GL + + D+ + S + D Sbjct: 436 SVLKDFGLNDFYLELSTRD-------------DSKPDKFVGSDEEWAKATAILEQVGRDS 482 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y + + D++ ++ + FG + Sbjct: 483 GLELVPDPGGAAFYGPKI---SVQAKDAIGRTWQMGTVQYDFNQPARFG--------LEY 531 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 DG + S G++ V+ + G W V + + + Sbjct: 532 TAPDGTRQQPVMIHSAKFGSIERFMGVLIEHYAGSFPAWLAPVQVLAVPVA------EAF 585 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + A+L+ G D ++ + A P +I G + V ++R Sbjct: 586 DGYLKDVVAQLTARGIRAEVDLSDDRFAKKIRNASKEKVPFVLIAGGEDADAGAVSFRYR 645 Query: 422 LTGIREDMSLEEVINYASHRFSNNRPV 448 + + E + + V Sbjct: 646 DGRQDNGVPVAEAVERIVAAVRDRVQV 672 >gi|309808806|ref|ZP_07702691.1| proline--tRNA ligase [Lactobacillus iners LactinV 01V1-a] gi|308167932|gb|EFO70065.1| proline--tRNA ligase [Lactobacillus iners LactinV 01V1-a] Length = 472 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 109/273 (39%), Positives = 143/273 (52%), Gaps = 3/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DA SH+LMLR G I Q + G+Y++LPL L II EE Sbjct: 1 MRQSILFIPTLKEVPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLAYLVLRKAEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 EM +P A LW ESGR YG EM RL DR+ + + GPTHEE T+I Sbjct: 61 MENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKDRHGRESLLGPTHEETFTEIIGK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NIKSYKQMPIALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDKQFDDQKHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R G++ P+ A SG +GG S EF A GE + ++ D Sbjct: 181 YKKIFKRCGVEVYPVIANSGTMGGKNSTEFQAPAAIGEDVIATNETGTYSANLEMARSID 240 Query: 241 DI---ISLNSIVEQWTAPYAATSDVHNEKLFDS 270 +E+ P AT + +E L Sbjct: 241 TFSPEKEELKPLEKVATPDCATIEQLSEFLHVP 273 Score = 45.9 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 42/97 (43%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A N D + IEVGHIF GT Y+ M+A F +GK Sbjct: 376 DFKVNEFADLRTANAGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTNSMNAKFLDQNGKTQ 435 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 + MGSYGIG R+++A++E GI F Sbjct: 436 PIIMGSYGIGVTRMLSAIVEQHSTDNGIFLAKRSCSF 472 >gi|309807201|ref|ZP_07701175.1| proline--tRNA ligase [Lactobacillus iners LactinV 03V1-b] gi|308166422|gb|EFO68627.1| proline--tRNA ligase [Lactobacillus iners LactinV 03V1-b] Length = 472 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 109/273 (39%), Positives = 143/273 (52%), Gaps = 3/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DA SH+LMLR G I Q + G+Y++LPL L II EE Sbjct: 1 MRQSILFIPTLKEVPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLAYLVLRKAEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 EM +P A LW ESGR YG EM RL DR+ + + GPTHEE T+I Sbjct: 61 MENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKDRHGRESLLGPTHEETFTEIIGK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NIKSYKQMPIALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDKQFDDQKHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R G++ P+ A SG +GG S EF A GE + ++ D Sbjct: 181 YKKIFKRCGVEVYPVIANSGTMGGKNSTEFQAPAAIGEDVIATNETGTYSANLEMARSID 240 Query: 241 DI---ISLNSIVEQWTAPYAATSDVHNEKLFDS 270 +E+ P AT + +E L Sbjct: 241 TFSPEKEELKPLEKVATPDCATIEQLSEFLHVP 273 Score = 45.9 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 42/97 (43%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A N D + IEVGHIF GT Y+ M+A F +GK Sbjct: 376 DFKVNEFADLRTANAGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTNSMNAKFLDQNGKTQ 435 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 + MGSYGIG R+++A++E GI F Sbjct: 436 PIIMGSYGIGVTRMLSAIVEQHSTDNGIFLAKRSCSF 472 >gi|300120854|emb|CBK21096.2| unnamed protein product [Blastocystis hominis] Length = 767 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 81/439 (18%), Positives = 139/439 (31%), Gaps = 41/439 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + D + L H+ S G +LP G + + IR E + G E+ Sbjct: 367 EEAKKNDHRRLGEQQDLF--FFHELSPGSCFFLPKGAYIYNKLIEFIRHEYHERGYTEVV 424 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + + +LW SG Y M L + +D P + +F+ + SYR LP Sbjct: 425 SPNVYNLELWNISGHASHYRDSMF-LFNCDDTEYGLKPMNCPGHCLMFKHAMHSYRELPI 483 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 F + R+EL G+ R R F DA+ F + + + + ++ G Sbjct: 484 RFADFGVLHRNELSGALNGLTRVRRFQQDDAHIFCRPDQIKQE-VSGVLDFMRHVYGIFG 542 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + + P A+ T+ + Sbjct: 543 MSF-NLELSTRPKKAMGDLALWQQAEASLTESLNEFIGE---------------GNWKVN 586 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ K+ D+L + + ++ F ++ +K ADG Sbjct: 587 PGDGAFYGPKIDI---KVMDALHRVHQTATIQLD----FQLPIRF----ELEYKKADGSM 635 Query: 310 HYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 M I R A ++E A + C + +K Sbjct: 636 ERPVMVHRAILGSVERSFAILLEHFKGKWPFWLSPRQAIVIPV-------NATCMEYAQK 688 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 + RL DD G + A L F ++VG+K V I+ R I Sbjct: 689 VRQRLWDNYFQAEVDDTGRTLNKMVREAQLAQFNYILVVGNKEAETDTVTIRSRSNEIIG 748 Query: 428 DMSLEEVINYASHRFSNNR 446 +++E I N + Sbjct: 749 TKTVDECIAMFKEMEKNYQ 767 >gi|194384006|dbj|BAG59361.1| unnamed protein product [Homo sapiens] Length = 602 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 147/445 (33%), Gaps = 44/445 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 185 KMLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNALIEFIRSE 242 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + P + +F Sbjct: 243 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEL-FALKPMNCPGHCLMFDH 301 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 302 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 360 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E D Sbjct: 361 FLRTVYSVFGFSFKLN-LSTRPEKFLGDIE-----------------VWDQAEKQLENSL 402 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 403 NEFGEKWELNSGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 451 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 452 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 507 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ + D D G + + A L + ++VG K V Sbjct: 508 --TCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTV 565 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 I+ R + + ++ E I Sbjct: 566 NIRTRDNKVHGERTISETIERLQQL 590 >gi|281357583|ref|ZP_06244070.1| prolyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548] gi|281315840|gb|EFA99866.1| prolyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548] Length = 575 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 108/261 (41%), Positives = 152/261 (58%), Gaps = 2/261 (0%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 SK ++E+P+DA+ SHK ++R G + S GIYS LPLG++ ++ + AIIREE N Sbjct: 1 MSKLVGRRIKEDPKDAKTVSHKFLVRGGYVRPVSAGIYSLLPLGKRIVEKIEAIIREEMN 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 R E+ +P + ADLW ESGRY+S G E+LR DRNDK MI THEE + + R+ + Sbjct: 61 RIEGQEVLMPVVLPADLWKESGRYESVGAELLRFRDRNDKPMILAMTHEEGIVHLVRTEL 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY+ LP YQIQ K+RDE RPR G++R REF MKDAYSF + Y + +Y Sbjct: 121 NSYKQLPVMLYQIQTKYRDEARPRAGLIRVREFTMKDAYSFHTDQADLEKYYYRCHEAYE 180 Query: 183 RIFHRLGLKSI-PMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF R+G+K++ + A SG +GG +SHEF+ + D GE V + D+ Sbjct: 181 RIFRRVGMKNVLSIEANSGMMGGKVSHEFMAICDCGEDTVITNADYSYRANREIAVAAWK 240 Query: 242 I-ISLNSIVEQWTAPYAATSD 261 +E+ + P T + Sbjct: 241 FDKGEPLPLEKVSTPGTKTIE 261 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 73/174 (41%), Positives = 103/174 (59%), Gaps = 2/174 (1%) Query: 261 DVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ + D P + +RGIEVG+IF GTKY+ M + DGK H + MG YG Sbjct: 384 DIACVREGDPCPLTGQPLIFSRGIEVGNIFQLGTKYTESMHCDYLDRDGKSHPMIMGCYG 443 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R +AAVIE S D G IWP S+AP+++ L I +ACEK+YA L+ G + Sbjct: 444 IGVGRAMAAVIEQSCDEYGPIWPMSIAPYQVELCAINPDKAGVGEACEKLYADLTAAGIE 503 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 V +DD GE+ GS F+ ADL+G PL+++V K ++D+ VE K R + E + + Sbjct: 504 VLYDDRGEKAGSMFSDADLIGIPLRLVVSPKTLADNAVEFKVRGSRDAEKLEIS 557 >gi|12845562|dbj|BAB26799.1| unnamed protein product [Mus musculus] Length = 722 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 74/449 (16%), Positives = 151/449 (33%), Gaps = 44/449 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 305 KLLKEWEKFQEEAKNRDHGKIGRDQELY--FFHELSPGSCFFLPKGAYIYNTLMEFIRSE 362 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + + P + +F Sbjct: 363 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSF-EVEKEQFALKPMNCPGHCLMFDH 421 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 422 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 480 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E A+ Sbjct: 481 FLRTVYSVFGFSFKLN-LSTRPEKFLGDIEIWNQAEK-----------------QLENSL 522 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 523 NEFGEKWELNPGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 571 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 572 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 627 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ + D D G + + A L + ++VG K + V Sbjct: 628 --TCDEYAQKVRQQFHDAKFMADTDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTV 685 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 I+ R + + ++EE + Sbjct: 686 NIRTRDNKVHGERTVEETVRRLQQLKQTR 714 >gi|229817161|ref|ZP_04447443.1| hypothetical protein BIFANG_02420 [Bifidobacterium angulatum DSM 20098] gi|229784950|gb|EEP21064.1| hypothetical protein BIFANG_02420 [Bifidobacterium angulatum DSM 20098] Length = 637 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 119/427 (27%), Positives = 181/427 (42%), Gaps = 20/427 (4%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DA++ S KL+ R G + + + GI++WLPLG L+ + IIREE Sbjct: 37 RMSTMFLRTLREDPADADVVSDKLLQRAGYLRKAAPGIWTWLPLGLNVLNKIENIIREEM 96 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 A E+ L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 97 ASINAQEVHFSGLLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDL 156 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF L EG +Y +Y Sbjct: 157 YSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTLDKEGLVKAYMDERGAY 216 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF RL L +P+ A +GP+GG S EF+ + GE S + + + T Sbjct: 217 ERIFKRLDLDYVPVHAMAGPMGGFESEEFLAPMEIGEDTFAQSPSGKAWNVEALTTPEPP 276 Query: 242 IISLNSIVE--QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL--- 296 I ++ + P AAT D E + P + ++ K++ Sbjct: 277 AIDYSNTPAATKRPTPDAATIDKMVEFANVNHPRTDGREWQASDILKNVVIVVKHAEDEN 336 Query: 297 ----PMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 G G + A E ++ Sbjct: 337 HDEPWRELVVVGVPGDRVVDMKRLEAQFAPAEIEEATEEDLKKHPELVKGYIGPMVLGPQ 396 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQ-VIVGSKF 410 + + E + D + + F AD G ++ G F Sbjct: 397 ARDGKKAENADETGEAL---------RYLLDAHIARGSAWFTGADEAGVDYYDLVYGRDF 447 Query: 411 VSDSKVE 417 +D VE Sbjct: 448 EADGTVE 454 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 4/188 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ RG+E+G +F G KYS + +GK V MG Sbjct: 451 GTVEAVEVRHGDMSPDGSGPLSFERGVEIGQVFQLGLKYSNALGLKVLDQNGKTVPVWMG 510 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG RV+A + E+ HD +G+ W S + D+ + E++ A L Sbjct: 511 SYGIGVSRVMACIAETHHDERGLAW-PSCIAPAQVHVVATGKDEKAFEGAEQLIAELEAK 569 Query: 376 GCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD + G +F A+L+G P +VG +V+D +EI+ R + + E Sbjct: 570 GVEVIFDDRKKVSPGVKFKDAELIGVPQIAVVGRDYVNDGTIEIRDRNGDNKVIVPAAEA 629 Query: 435 INYASHRF 442 + R Sbjct: 630 VETLLARI 637 >gi|13435498|gb|AAH04621.1| Tars protein [Mus musculus] Length = 457 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 151/445 (33%), Gaps = 44/445 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 40 KLLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNTLMEFIRSE 97 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + + P + +F Sbjct: 98 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSF-EVEKEQFALKPMNCPGHCLMFDH 156 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 157 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 215 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E A+ Sbjct: 216 FLRTVYSVFGFSFKLN-LSTRPEKFLGDIEIWNQAEK-----------------QLENSL 257 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 258 NEFGEKWELNPGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 306 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 307 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 362 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ + D D G + + A L + ++VG K + V Sbjct: 363 --TCDEYAQKVRQQFHDAKFMADTDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTV 420 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 I+ R + + ++EE + Sbjct: 421 NIRTRDNKVHGERTVEETVRRLQQL 445 >gi|62078811|ref|NP_001014062.1| threonyl-tRNA synthetase, mitochondrial precursor [Rattus norvegicus] gi|81884372|sp|Q68FW7|SYTM_RAT RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName: Full=Threonine--tRNA ligase; Short=ThrRS; AltName: Full=Threonyl-tRNA synthetase-like 1; Flags: Precursor gi|51259375|gb|AAH79154.1| Threonyl-tRNA synthetase 2, mitochondrial (putative) [Rattus norvegicus] Length = 723 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 85/458 (18%), Positives = 146/458 (31%), Gaps = 57/458 (12%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + RD + L H+ S G +LP G + + + A IR E R G E Sbjct: 298 RREEAELRDHRRIGKEQELF--FFHELSPGSCFFLPRGTRIYNALVAFIRAEYARRGFSE 355 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLAD----------------RNDKAMIYGPTHEE 112 + PTL S LW +SG ++ Y M L + P + Sbjct: 356 VKTPTLFSTKLWEQSGHWEHYRAHMFSLKPPGTDGVDSSQSGHPARCPKDTLALKPMNCP 415 Query: 113 VMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSK 171 +F +S+R LP + R E G+ R F DA+ F P + Sbjct: 416 AHCLMFAHRPRSWRELPVRLADFGVLHRAEASGSLGGLTRLWRFQQDDAHIFCA-PSQLE 474 Query: 172 HSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 ++ LG F + T D Sbjct: 475 AEIRGCLDFLRSVYSVLGFS------------------FHLALSTRPPGFLGEPHLWDQA 516 Query: 232 IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 ++ ++ A Y DVH L D+L + ++ F Sbjct: 517 EKVLQQALEEFGEPWNLNPGDGAFYGPKIDVH---LHDALGRPHQCGTIQLD----FQLP 569 Query: 292 TKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 ++ +KG G + V + +G++ + V+ + G WP ++PF++ Sbjct: 570 LRFD----LQYKGPAGAPECPVLIHRAVLGSVERLLGVLA---ESCGGRWPLWLSPFQVV 622 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSK 409 +I ++ + D ++ L G D D G + + A L + Q +VG + Sbjct: 623 VIPVRTEQE---DYARQVQQCLQAAGLVSDLDADCGLTLSRRVRRAQLAHYNFQFVVGQR 679 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 S V ++ R + L E + P Sbjct: 680 EQSQMSVNVRTRDNRQLGERGLAESVQRLLELQDARVP 717 >gi|309805512|ref|ZP_07699557.1| proline--tRNA ligase [Lactobacillus iners LactinV 09V1-c] gi|308165163|gb|EFO67401.1| proline--tRNA ligase [Lactobacillus iners LactinV 09V1-c] Length = 472 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 109/273 (39%), Positives = 143/273 (52%), Gaps = 3/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DA SH+LMLR G I Q + G+Y++LPL L II EE Sbjct: 1 MRQSILFIPTLKEVPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLAYLVLRKAEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 EM +P A LW ESGR YG EM RL DR+ + + GPTHEE T+I Sbjct: 61 MENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKDRHGRESLLGPTHEETFTEIIGK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NIKSYKQMPIALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDKQFDDQKHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R G++ P+ A SG +GG S EF A GE + ++ D Sbjct: 181 YKKIFKRCGVEVYPVIANSGTMGGKNSTEFQAPAAIGEDVIATNETGTYSANLEMARSID 240 Query: 241 DI---ISLNSIVEQWTAPYAATSDVHNEKLFDS 270 +E+ P AT + +E L Sbjct: 241 TFSPEKEELKPLEKVATPDCATIEQLSEFLHVP 273 Score = 45.9 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 42/97 (43%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A N D + IEVGHIF GT Y+ M+A F +GK Sbjct: 376 DFKVNEFADLRTANAGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTNSMNAKFLDQNGKTQ 435 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 + MGSYGIG R+++A++E GI F Sbjct: 436 PIIMGSYGIGVTRMLSAIVEQHSTDNGIFLAKRSCSF 472 >gi|291571004|dbj|BAI93276.1| threonyl-tRNA synthetase [Arthrospira platensis NIES-39] Length = 604 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 61/436 (13%), Positives = 136/436 (31%), Gaps = 33/436 (7%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD +L L Q G+ W P G + ++ EQ R G + Sbjct: 196 EEALRRDHRRLGKELGLFI-FSDQVGPGLPLWTPKGTILRTTLEDFLKREQVRRGYQPVV 254 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHIKSYRNLP 129 P L +L+ SG + Y +++ + ++ + + I++S ++SYR LP Sbjct: 255 TPHLGRVNLFKTSGHWQKYREDLFPMMGESEDEGFVLKAMNCPFHVQIYKSSLRSYRELP 314 Query: 130 FTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + +R E G + +D +TPE + K+ + +L Sbjct: 315 IRLAEFGTVYRYEQSGELGGLTRVRGFTQDDAHLFVTPEQLDDEFLKVVDLIQSVLKKL- 373 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + + D + S + + + + Sbjct: 374 ------KLDQSFKAR------LSFRDPNSDKYIGSDQAWEKAENAIRRAVETLGMNYFEG 421 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D + D+L ++ ++ + DG Sbjct: 422 IGEAAFYGPKLDFI---VQDALEREWQLGTVQVDYNLP--------ERFDLEYVAEDGTR 470 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + G++ + ++ + G +W ++ + E + Sbjct: 471 QRPVMIHRAPFGSLERLIGILIEEYTGDFPLW------LAPVMVRLLPVSDEFLPFVESV 524 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 + + D +++G A+ P+ +VG+K V + + I+ R G Sbjct: 525 AEKWRSLDIRAEADHSHDRLGKMIRNAEKAKVPVMAVVGAKEVESNSLSIRTRALGELGT 584 Query: 429 MSLEEVINYASHRFSN 444 +++ E + +N Sbjct: 585 LTVAETQSRLQFALAN 600 >gi|119631208|gb|EAX10803.1| threonyl-tRNA synthetase, isoform CRA_a [Homo sapiens] Length = 619 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 147/445 (33%), Gaps = 44/445 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 202 KMLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNALIEFIRSE 259 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + P + +F Sbjct: 260 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEL-FALKPMNCPGHCLMFDH 318 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 319 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 377 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E D Sbjct: 378 FLRTVYSVFGFSFKLN-LSTRPEKFLGDIE-----------------VWDQAEKQLENSL 419 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 420 NEFGEKWELNSGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 468 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 469 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 524 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ + D D G + + A L + ++VG K V Sbjct: 525 --TCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTV 582 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 I+ R + + ++ E I Sbjct: 583 NIRTRDNKVHGERTISETIERLQQL 607 >gi|114600754|ref|XP_001153291.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic isoform 1 [Pan troglodytes] Length = 619 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 147/445 (33%), Gaps = 44/445 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 202 KMLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNALIEFIRSE 259 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + P + +F Sbjct: 260 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEL-FALKPMNCPGHCLMFDH 318 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 319 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 377 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E D Sbjct: 378 FLRTVYSVFGFSFKLN-LSTRPEKFLGDIE-----------------VWDQAEKQLENSL 419 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 420 NEFGEKWELNSGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 468 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 469 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 524 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ + D D G + + A L + ++VG K V Sbjct: 525 --TCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTV 582 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 I+ R + + ++ E I Sbjct: 583 NIRTRDNKVHGERTISETIERLQQL 607 >gi|326792022|ref|YP_004309843.1| threonyl-tRNA synthetase [Clostridium lentocellum DSM 5427] gi|326542786|gb|ADZ84645.1| threonyl-tRNA synthetase [Clostridium lentocellum DSM 5427] Length = 657 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 76/441 (17%), Positives = 154/441 (34%), Gaps = 36/441 (8%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD +L L T + +G+ +P G + + + + +E+ + G + Sbjct: 235 LEEAKKRDHNKLGRELKLFTT-DEKVGQGLPLLMPKGARIVQTLQRFVEDEEEKRGYVLT 293 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 P + +DL+ SG +D Y M +++ + P ++ + SYR+ Sbjct: 294 KTPLMAKSDLYKMSGHWDHYKDGMFVLGDEEKDKEVFALRPMTCPFQFTVYNAEQHSYRD 353 Query: 128 LPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFH 186 LP + + FR+E G++R R+F + + + TPE + + + + Sbjct: 354 LPIRYGETSTLFRNESSGEMHGLIRVRQFTISEGH-LVCTPEQLEDEFRGVIELINYMMA 412 Query: 187 RLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLN 246 LG I D+S+ F + + + D + Sbjct: 413 TLG------------IENDISYRFSKWDPANTGKYINDPEAWERTEGLMRNILDHLQINY 460 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 A Y D+ + + + + I+ G T+ AD Sbjct: 461 EEAVGEAAFYGPKLDIQFKNVH---GKEDTIITVQIDFALGERLG--------MTYIDAD 509 Query: 307 GKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 G+ H + + IG A++ + +P +AP + ++ + D Sbjct: 510 GEKKHPLIIHRTSIGCYERTLAMLI---EKYAGQFPTWLAPVAVKVLPLSDK---YADYA 563 Query: 366 EKIYARLSKVGC-DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ G V D E+IG + A + P V+VG++ + + V ++ R G Sbjct: 564 AEVVKAFKDHGILKVEADYRTEKIGYKIREARMERIPYIVVVGAEEMENKTVSVRSRQKG 623 Query: 425 IREDMSLEEVINYASHRFSNN 445 SLE +N Sbjct: 624 DEGVQSLESFVNRVDEEIKTK 644 >gi|315500848|ref|YP_004079735.1| prolyl-tRNA synthetase [Micromonospora sp. L5] gi|315407467|gb|ADU05584.1| prolyl-tRNA synthetase [Micromonospora sp. L5] Length = 589 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 99/236 (41%), Positives = 137/236 (58%), Gaps = 1/236 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S L L+E+P DAE+ SH+L+LR G + + + G Y+WLPLG+ LD + AI+R+E Sbjct: 4 RMSTLLLRTLREDPADAEVPSHRLLLRAGYVRRAAPGGYTWLPLGKLVLDRITAIVRDEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G E+ P L A+ + SGR+ YG ++ LADR + PTHEE+ + + Sbjct: 64 TGIGDQEVHFPALLPAEPYRTSGRWTEYGDDIFTLADRKGAEHLLAPTHEELAALLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+ P T +QIQ KFRDE RPR G++R REFLMKDAYSFDL G + +Y++ +Y Sbjct: 124 FTSYRDFPVTLFQIQTKFRDEARPRAGLLRGREFLMKDAYSFDLDEAGLQAAYDRHRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 R+F RLGL + A SG +GG S EF+ GE D+ +E Sbjct: 184 ERVFTRLGLDFTTVHAMSGAMGGSASEEFLAATPVGEDTFVGCTAC-DYAANTEAV 238 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 63/188 (33%), Positives = 94/188 (50%), Gaps = 7/188 (3%) Query: 258 ATSDVHNEKLFDSLP---ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 T + + DS P + + RGIE+GHIF G +Y+ + G +GK M Sbjct: 396 GTIEAAEVRPGDSCPACADGELTIRRGIEIGHIFQLGRRYTDAFAVDVLGPEGKPVRPTM 455 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G YGIG R VAAV E HD +G++WP +VAP + LI DA + RL+ Sbjct: 456 GCYGIGVSRAVAAVAEQHHDDRGLVWPAAVAPCDVHLIAAGKG--PQLDAALDLGGRLAA 513 Query: 375 VGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G V DD G +F A+L+G P V+VG + +++ VE++ R TG R ++ +E Sbjct: 514 AGLRVLVDDRTHVSAGVKFTDAELIGIPRAVVVGRR-LAEGYVELRDRATGERTELPVEA 572 Query: 434 VINYASHR 441 ++ Sbjct: 573 IVERLRDE 580 >gi|302864555|ref|YP_003833192.1| prolyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029] gi|302567414|gb|ADL43616.1| prolyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029] Length = 589 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 99/236 (41%), Positives = 137/236 (58%), Gaps = 1/236 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S L L+E+P DAE+ SH+L+LR G + + + G Y+WLPLG+ LD + AI+R+E Sbjct: 4 RMSTLLLRTLREDPADAEVPSHRLLLRAGYVRRAAPGGYTWLPLGKLVLDRITAIVRDEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G E+ P L A+ + SGR+ YG ++ LADR + PTHEE+ + + Sbjct: 64 TGIGDQEVHFPALLPAEPYRTSGRWTEYGDDIFTLADRKGAEHLLAPTHEELAALLVKDL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+ P T +QIQ KFRDE RPR G++R REFLMKDAYSFDL G + +Y++ +Y Sbjct: 124 FTSYRDFPVTLFQIQTKFRDEARPRAGLLRGREFLMKDAYSFDLDEAGLQAAYDRHRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 R+F RLGL + A SG +GG S EF+ GE D+ +E Sbjct: 184 ERVFTRLGLDFTTVHAMSGAMGGSASEEFLAATPVGEDTFVGCTAC-DYAANTEAV 238 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 63/188 (33%), Positives = 94/188 (50%), Gaps = 7/188 (3%) Query: 258 ATSDVHNEKLFDSLP---ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 T + + DS P + + RGIE+GHIF G +Y+ + G +GK M Sbjct: 396 GTIEAAEVRPGDSCPACADGELTIRRGIEIGHIFQLGRRYTDAFAVDVLGPEGKPVRPTM 455 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G YGIG R VAAV E HD +G++WP +VAP + LI DA + RL+ Sbjct: 456 GCYGIGVSRAVAAVAEQHHDDRGLVWPAAVAPCDVHLIAAGKG--PQLDAALDLGGRLAA 513 Query: 375 VGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G V DD G +F A+L+G P V+VG + +++ VE++ R TG R ++ +E Sbjct: 514 AGLRVLVDDRTHVSAGVKFTDAELIGIPRAVVVGRR-LAEGYVELRDRATGERTELPVEA 572 Query: 434 VINYASHR 441 ++ Sbjct: 573 IVERLRDE 580 >gi|55379994|ref|YP_137844.1| threonyl-tRNA synthetase [Haloarcula marismortui ATCC 43049] gi|55232719|gb|AAV48138.1| threonyl-tRNA synthetase [Haloarcula marismortui ATCC 43049] Length = 672 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 148/445 (33%), Gaps = 44/445 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNR 63 ++ + RD ++ L + I + G+ + P G+K L+ ++ + Sbjct: 260 EFLEQRRKAEERDHRKIGQEMDLFS--IDETTGPGLPLYEPNGKKILNELSDYVAGLNRD 317 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + +LW +SG Y++Y +M L D ND+ P + IF + Sbjct: 318 AGYDEVETPHVFRTELWKKSGHYENYVDDMF-LLDVNDEEYGLKPMNCPGHATIFEQNSW 376 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP +++ +R E R G+ R+ F + D + + P+ + L Sbjct: 377 SYRDLPVRYFEDGKVYRKEQRGELSGLSRTWAFTIDDGH-LFVRPDQIEEEVLATVDIIL 435 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 L A T + + + + ++ Sbjct: 436 DTLDTFNLDYTVQFA------------------TRPEKSVGGDEIWEKAESQLESVLEEQ 477 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + E A Y D E D+L + G ++ Sbjct: 478 DIDYVVEEGDGAFYGPKIDFAFE---DALGRHW--------DGPTVQLDFNMPERFDLSY 526 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G D ++H + G+ V+ + +P +AP +I L+ + + Sbjct: 527 TGEDNEEHRPVMIHRALYGSYERFFMVLT---EHYNGKFPPWLAPEQIRLLPVSDDN--- 580 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 CE+I L V +D +G + A P ++G + ++ R Sbjct: 581 ITYCEEIQDELDD--FRVTIEDRSWTVGKKIQQAHDDRVPYMCVIGDNEEEAGTISVRDR 638 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 +D+ + E ++ R Sbjct: 639 KEREEKDIDIAEFRDHLETEVEQQR 663 >gi|15616855|ref|NP_240068.1| prolyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11134948|sp|P57333|SYP_BUCAI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|25293219|pir||B84958 proline-tRNA ligase (EC 6.1.1.15) [imported] - Buchnera sp. (strain APS) gi|10038919|dbj|BAB12954.1| prolyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 572 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 113/292 (38%), Positives = 167/292 (57%), Gaps = 7/292 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M S+Y L ++ P DA+I SH+LM+R+GMI + S G+Y WLP G + L + II E Sbjct: 1 MLTSQYLLSTSKDIPYDAKIISHQLMIRSGMIRKTSSGLYVWLPTGMRVLKKIKNIITTE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A+E+ +P +Q LW ES R + YG+E+LR DR I GPT+EEV+T+ S Sbjct: 61 MEKINALEILMPIIQPEYLWKESRRLNLYGEELLRFLDRRKNQFILGPTNEEVVTNFIGS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP T YQIQ KFRDE+RPRFG++R+REF MKDAYSF + +++YNK + S Sbjct: 121 EIHSYKQLPLTVYQIQTKFRDEIRPRFGIIRTREFTMKDAYSFHINQSCLENTYNKFYDS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC-----SKDFMDFPIPSE 235 Y+ IF ++ L ++A+SG +GG++SHEF + GE ++ M+ E Sbjct: 181 YINIFKKMNLNFCAVKADSGSMGGNISHEFQAFSQNGEDEIVFSNDKLYSSNMNMAESIE 240 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 DF + +++ T S + +EKL L + ++ I Sbjct: 241 TIDFFKKKYSSCLIKNKTN--TKKSIIMSEKLNTPLINQIQTFLIQTKINDI 290 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 93/193 (48%), Gaps = 3/193 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSARG--IEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 P D+ D P IE+GHIF G KYS + + K +G + Sbjct: 380 PMPIFKDIRKVTKNDLSPNGSGYLNIKQSIEIGHIFQLGQKYSRKIQQSVKIKNGNLKNL 439 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R+ AAVIE HD GIIWPDS+APF++ ++ I D + +Y + Sbjct: 440 YMGCYGIGITRIAAAVIEQHHDKNGIIWPDSIAPFEVVILPINMKKDNKIKIIAHFLYKK 499 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 K G DV DD E+ G F DL+G P Q+I+ + ++ VE + R +++ Sbjct: 500 FKKTGIDVILDDRDERPGVMFNEVDLIGIPHQIIISKRSINYDNVEYRERKNKENILINI 559 Query: 432 EEVINYASHRFSN 444 +++ N+ + Sbjct: 560 KDIKNFIIQKLKK 572 >gi|296394216|ref|YP_003659100.1| threonyl-tRNA synthetase [Segniliparus rotundus DSM 44985] gi|296181363|gb|ADG98269.1| threonyl-tRNA synthetase [Segniliparus rotundus DSM 44985] Length = 683 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 63/437 (14%), Positives = 129/437 (29%), Gaps = 49/437 (11%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + G+ + P G + R + G ++ Sbjct: 257 EAERRDHRKLGAELDLFS-FPDELGSGLPVFHPKGGVLRKELEDYSRAKHIEAGYEFVNT 315 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDIFR 119 P + + L+ SG D Y M + + P + + IFR Sbjct: 316 PHITKSHLYEVSGHLDWYADGMFPPMHVDEELHEDGSVRKPGQDYYLKPMNCPMHNLIFR 375 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 S +SYR LP ++ +R E G+ R R DA+ + + + Sbjct: 376 SRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTRAQMKDEL-STTL 434 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L + GL + + E + + + + + Sbjct: 435 QFVLDLLRDYGLDDFYLELST----------------KDEQKFVGADEIWAEATRTLSEV 478 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + A Y + + D+L ++S ++ F ++ Sbjct: 479 AEASGLTLVPDPGGAAFYGPKI---SVQAKDALGRTWQMSTIQLD----FNLPERFD--- 528 Query: 299 SATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + G G + G++ V+ + G +W +AP ++ I + Sbjct: 529 -LEYTGPSGHKERPVMIHRALFGSIERFIGVLVEHYAGAFPMW---LAPVQVMGIPV--- 581 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + + L G D +++ + P V+ G + V V Sbjct: 582 SEDHVPHLREFVDSLRAGGVRAHIDSSDDRMQKKIFTHTAQKIPFLVLAGGRDVEAQTVS 641 Query: 418 IKHRLTGIREDMSLEEV 434 + R R + + E Sbjct: 642 FRFRDGSQRNAVPVAEA 658 >gi|229828744|ref|ZP_04454813.1| hypothetical protein GCWU000342_00810 [Shuttleworthia satelles DSM 14600] gi|229793338|gb|EEP29452.1| hypothetical protein GCWU000342_00810 [Shuttleworthia satelles DSM 14600] Length = 597 Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats. Identities = 73/448 (16%), Positives = 141/448 (31%), Gaps = 49/448 (10%) Query: 9 PILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 +L+E RD + L L M H+ + G+ WLP G K + + R R + Sbjct: 174 RLLREAKERDHKKLGPALELF--MFHESAPGMPYWLPRGWKLFNALLDYWRSVHERHNYL 231 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA---MIYGPTHEEVMTDIFRSHIKS 124 E++ P + + LW SG + Y + M + + P + +++ ++S Sbjct: 232 EIAAPVINNQKLWATSGHWGHYKENMFIIPGEKEDESDYYAAKPMNCPNAIMFYKNGLRS 291 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LPF Q+ + R E G+ R + F DA+ + + +S Sbjct: 292 YRDLPFRVSQVDVIHRKEKSGELNGLFRVQMFRQDDAHILVTEDQIASE--IADIMSIAD 349 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + S + P A+ ++ + Sbjct: 350 EIYSTFGLSFRAELSTRPDDFMGDIATWDKAEAELREILDNMYGE--------------- 394 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D+ ++ D+L ++ ++ FG KY+ + Sbjct: 395 GNYDVNEGDGAFYGPKIDL---QMKDALGREWQMGTIQLDFQLPLNFGLKYAA------Q 445 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 K + + R + +IE+ Sbjct: 446 DGSEKQPVLIHRAIFGSMERFIGILIENFKGSFPFWVSPYQVGIVPIRT-------SHNA 498 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 EKI L +G V D + + + L P +++G K V + V + R Sbjct: 499 YAEKIQEELRSMGIRVEADYADKNMNEKIKRFRTLRDPYTLVIGDKEVENGTVSVTVRGQ 558 Query: 424 GIR-EDMSLEEV--------INYASHRF 442 + D+ L + + + Sbjct: 559 KQQIHDLPLADFCAMCRKLQVEHLKDLL 586 >gi|255560023|ref|XP_002521030.1| threonyl-tRNA synthetase, putative [Ricinus communis] gi|223539867|gb|EEF41447.1| threonyl-tRNA synthetase, putative [Ricinus communis] Length = 691 Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats. Identities = 74/417 (17%), Positives = 144/417 (34%), Gaps = 38/417 (9%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R +Y + + D + K L HQ S G + +LP G + + + IR + Sbjct: 306 RLKEYIQQLEEAKKYDHRLLGTKQELF--FCHQLSPGSWFFLPHGTRIYNKLMDFIRVQY 363 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G E+ P + + LW SG +Y + M L + + P + IF+ Sbjct: 364 RERGYEEVKSPNIYNMKLWETSGHAANYKENMF-LLEIEKQEFGLKPMNCPGHCVIFQHR 422 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SYR LP + R+E G+ R R F DA+ F K + Sbjct: 423 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCR-ETQIKDEVTGVLNF 481 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + G ++ + P + + S + D Sbjct: 482 IDYAYKIFGFTY-DLKLSTRP-----------------EKYLGDLATWEKAESSLKSALD 523 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D I E A Y D+ + D+L + + ++ F ++ L SA Sbjct: 524 DFGKPWQINEGDGAFYGPKIDI---SVSDALNRKFQCATLQLD----FQLPDRFELEYSA 576 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 ++ V + +G++ + A++ + WP ++P + + + Q Sbjct: 577 E--DEAKRERPVMIHRAILGSVERMFAILL---EHYKGKWPFWLSPRQAIVCPVSEKSQ- 630 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + ++ ++ K G + D +I + A L + ++VG + +V Sbjct: 631 --EYAVQVQDQIHKAGYYIDVDLTDRKIQKKVREAQLAQYNYILVVGEEEAKTGQVA 685 >gi|46190981|ref|ZP_00120791.2| COG0442: Prolyl-tRNA synthetase [Bifidobacterium longum DJO10A] gi|317482435|ref|ZP_07941452.1| prolyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA] gi|316916095|gb|EFV37500.1| prolyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA] Length = 594 Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats. Identities = 105/280 (37%), Positives = 154/280 (55%), Gaps = 2/280 (0%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 FL L+E+P DA++ S KL+ R G I + + GI++WLPLG + L+ + AIIREE N G Sbjct: 1 MFLRTLREDPADADVDSAKLLQRAGYIRKAAPGIWTWLPLGLRVLNKIEAIIREEINGIG 60 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 A E+ P L + + + R++ YG + RL DR++ + PTHEE+ T + + SY Sbjct: 61 AQEVHFPALLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDMYSSY 120 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 ++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG + +Y +Y RIF Sbjct: 121 KDLPVTLYQIQTKYRDEFRPRAGLIRGREFVMKDAYSFTIDEEGMRKAYYDERGAYERIF 180 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF--DDII 243 RL LK +P+ A SGP+GG S EF+ GE + + + + +T + Sbjct: 181 QRLDLKYVPVFAMSGPMGGSASEEFLAPMPIGEDTFALAPSGKAWNVEALSTPELPEIDA 240 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 S + P A T D E+ P + + Sbjct: 241 STTPAASKEATPDAKTIDNMIERANADHPRTDGREWQASD 280 Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 4/191 (2%) Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLP 297 ++ + ++V + + D P+ RG+E+G +F G KYS Sbjct: 386 ENEVDYYNLVYGRDFKADGVVEAVEVRHGDMSPDGSGPLSFERGVEIGQVFQLGLKYSKA 445 Query: 298 MSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + +GK V MG YGIG RV+A + E+ HD G+ W SV + Sbjct: 446 LDLKVLDQNGKAVPVWMGCYGIGVSRVLACIAETHHDEAGLAW-PSVIAPAAVHVVATGK 504 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D V + EK+ A L G +V +DD + G +F A+L+G PL +VG +V+D + Sbjct: 505 DAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFKDAELIGVPLVAVVGRDYVNDGTI 564 Query: 417 EIKHRLTGIRE 427 E++ R + Sbjct: 565 ELRDRNGENKV 575 >gi|256832610|ref|YP_003161337.1| threonyl-tRNA synthetase [Jonesia denitrificans DSM 20603] gi|256686141|gb|ACV09034.1| threonyl-tRNA synthetase [Jonesia denitrificans DSM 20603] Length = 673 Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats. Identities = 68/459 (14%), Positives = 132/459 (28%), Gaps = 47/459 (10%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +++ + + RD ++ L + + G+ + P G + R Sbjct: 249 LTEHLTRLAEAERRDHRRLGVEMDLFS-FPDEMGSGLAVFHPRGGVVRLEMEEYSRRRHI 307 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTH 110 G ++ P + L+ SG D Y + M + + P + Sbjct: 308 EAGYSFVNSPHITKGRLYEVSGHLDWYREGMYPAMHMDEERDADGTLRKQGQDYYLKPMN 367 Query: 111 EEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEG 169 + IF + +SYR LP ++ +R E G+ R+R F DA+ + + Sbjct: 368 CPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYCTKEQM 427 Query: 170 SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMD 229 L + GL + + + + D Sbjct: 428 KDEL-TNALTFVLDLLKDYGLDDFYLELSTRDPEKS----------------VGTDEIWD 470 Query: 230 FPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY 289 + D A Y + + D++ ++S ++ F Sbjct: 471 EATRTLEEVAQDSGLELVPDPGGAAFYGPKI---SVQAKDAIGRTWQMSTIQLD----FN 523 Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 K+ L A + V + G++ AV+ + G+ +W V + Sbjct: 524 LPEKFDLEYQAA---DGTRQRPVMIHRALFGSIERFFAVLLEHYAGQFPVWLAPVQVLAV 580 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 + D A L G DD ++ + A P VI G + Sbjct: 581 PVA------DAFNDYLGDFVAELRTRGVRAELDDSSDRFPKKVRNASTSKVPFTVIAGGE 634 Query: 410 FVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPV 448 V ++R + E+ I S V Sbjct: 635 DEQAGAVSFRYRDGSQENGIPREQAITRILESISTRAQV 673 >gi|300781050|ref|ZP_07090904.1| threonine--tRNA ligase [Corynebacterium genitalium ATCC 33030] gi|300532757|gb|EFK53818.1| threonine--tRNA ligase [Corynebacterium genitalium ATCC 33030] Length = 701 Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats. Identities = 64/459 (13%), Positives = 137/459 (29%), Gaps = 53/459 (11%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + +L+E RD ++ L + + G+ + P G + R+ G Sbjct: 268 YQHMLEEAEKRDHRRLGAEMDLFS-FPDEVGSGLPVFHPDGGIVRMEMENHSRKRHLEAG 326 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK------------AMIYGPTHEEV 113 ++ P + DL+ +SG D Y M + + P + Sbjct: 327 YSFVNTPHVTKGDLFQQSGHLDWYADGMFPPMQLDGEWDEDGNCVKQPVDYYAKPMNCPF 386 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKH 172 IF S +SYR LP ++ +R E G+ R+R F DA+ + T + + Sbjct: 387 HNLIFDSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYC-TEDQLEQ 445 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 + + + GL + + + D + Sbjct: 446 ELTDVLEFIISLLQDYGLDDFYLELST----------------KDPEKYIGDDDIWERST 489 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + A Y + + D++ ++S ++ F Sbjct: 490 NILESVATRSGLELVPDPAGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FNLPD 542 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 ++ + + +DG + G++ V+ + G W I + Sbjct: 543 RF----NLEYTSSDGTKQRPVMIHRALFGSIERFFGVLLEHYAGAFPAWLAPRQVVGIPV 598 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + + +L K G D +++ + P ++ G++ V Sbjct: 599 A------DEFAPHLDAVTDKLRKRGIRASVDHSDDRMQKKIRNHTTGKVPFMLLAGARDV 652 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHRF---SNNRP 447 V + + ++E I S +N +P Sbjct: 653 EADAVSFRFLDGSQVNGVPVDEAIELISQWVDGQNNEQP 691 >gi|224373093|ref|YP_002607465.1| prolyl-tRNA synthetase [Nautilia profundicola AmH] gi|254782910|sp|B9LA07|SYP_NAUPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|223588823|gb|ACM92559.1| prolyl-tRNA synthetase [Nautilia profundicola AmH] Length = 574 Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats. Identities = 115/291 (39%), Positives = 165/291 (56%), Gaps = 1/291 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++F +E P+DA +ASHK ++R G I Q + GIY + PLG+ LDN+ II++E Sbjct: 1 MRWSRFFAYTQKEAPKDAVVASHKYLVRGGYIKQVAAGIYDFAPLGKMVLDNIRDIIKKE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + +GA E+ + + +LW E+GR YGKE+LR+ DR D++ + PT+EE + D+ R Sbjct: 61 MDASGAQEVMLTFVTPNELWEETGRAKKYGKELLRIKDRKDQSFVLAPTNEESVVDLVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI LKFRDE RPRFG++R REF+MKDAYSF T E +N M + Sbjct: 121 TIKSYKQLPVNLYQINLKFRDEARPRFGLLRGREFIMKDAYSFHATEEDLDREFNLMEET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF +LGL + A+SG IGG S EF+VLADTGE + + D+ E Sbjct: 181 YKNIFTKLGLDFRAVWADSGAIGGSGSKEFMVLADTGEDDIVVCSEC-DYAANIEVATRK 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 N + + E + + + + S + + I+ G Sbjct: 240 HEKRENPVKTEVIEEVHTPDMKSIEDVCNFIGVDPYFSIKAVVKKAIYDDG 290 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 73/220 (33%), Positives = 105/220 (47%), Gaps = 3/220 (1%) Query: 227 FMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEV 284 + + N I + D+ K D P+ +GIEV Sbjct: 356 MAEELVCGANKKDYHIKGAGLLDANLLGNLTVYRDIAAVKEGDKCPKCGAPLKITKGIEV 415 Query: 285 GHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSV 344 GHIF GT YS PM+ATF +GK MG YGIG R+++A IE +HD KGIIWP + Sbjct: 416 GHIFKLGTVYSEPMNATFLDENGKAKPFIMGCYGIGVSRLISAAIEQNHDDKGIIWPKQI 475 Query: 345 APFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQV 404 APF + +I E +Y +L+ G DD E+ G + A +L+GFP+ V Sbjct: 476 APFVVDIIVGDVKKDEQLIFAEDLYDKLTSAGVKTILDDRAERFGPKIADFELVGFPVCV 535 Query: 405 IVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 IVG K + D KVE++ R TG + ++ + + +N Sbjct: 536 IVGKK-LKDGKVEVRDRRTGEKFEVEKDMALEKVMEIINN 574 >gi|300711550|ref|YP_003737364.1| threonyl-tRNA synthetase [Halalkalicoccus jeotgali B3] gi|299125233|gb|ADJ15572.1| threonyl-tRNA synthetase [Halalkalicoccus jeotgali B3] Length = 640 Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats. Identities = 75/446 (16%), Positives = 134/446 (30%), Gaps = 45/446 (10%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 ++ Q RD ++ L + + HS G + P G + IR + + Sbjct: 229 EFLDRREQAKERDHRKIGREMDLFS--VPDHSPGCPHYHPNGMTIRRELEEYIRTQNDAL 286 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL-ADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L +LW ESG D +G E + N+ P + I+ ++ Sbjct: 287 GYEEVRTPELNKKELWEESGHLDFFGSEGEFFLWEENETEYGLKPMNCANHAYIYDQQVR 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP F + +R+E G++R R D ++F + + V Sbjct: 347 SYRDLPVRFSEFGNVYRNEQSGELSGLLRVRGMTQDDGHAFIRRDQIQTEITETLRVI-- 404 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 I E + +T S + + + Sbjct: 405 -----------------EEIYEQFDFEVLYKLETKGDHAVGSDEVWAEATEALRNALEAE 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + E + Y + D+L + ++ + ++ Sbjct: 448 GLEYDVEEGEASFYGPKIGLD---ARDTLGREWTIGTVQLDFNIP--------ERLDLSY 496 Query: 303 KGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G D ++H M + R + +IE + Sbjct: 497 TGEDNEEHRPVMVHRALLGSFERFMGVMIEHFNGKFPTWLAPEQVRILPI-------SDD 549 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 E+I LS V +D IG + A P +IVG + + ++ Sbjct: 550 NVAYAEEIREVLSD--FRVGIEDRSWTIGKKIQTAHDDRVPYMLIVGGNEEAAGTISVRD 607 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R R D+S EE R Sbjct: 608 RFERERGDVSPEEFRTALETEVEEKR 633 >gi|289674658|ref|ZP_06495548.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5] Length = 172 Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats. Identities = 90/168 (53%), Positives = 123/168 (73%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S++ L +E P DA + SH+LMLR GMI + + G+Y+WLP+G + L V AI+REE Sbjct: 1 MRTSQFLLATQKETPSDAVVVSHQLMLRAGMIRKLASGLYTWLPMGLRVLRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ +P +Q A+LW ESGR++ YG E++RL DR+++ GPTHEEV+TD+ R+ Sbjct: 61 MDAAGALEILMPGIQPAELWQESGRWEQYGPELMRLVDRHNREFCLGPTHEEVITDLARN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPE 168 + SY+ LP YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E Sbjct: 121 ELNSYKQLPINLYQIQTKFRDEIRPRFGLMRGREFVMKDAYSFHADHE 168 >gi|315653428|ref|ZP_07906350.1| proline--tRNA ligase [Lactobacillus iners ATCC 55195] gi|315489353|gb|EFU78993.1| proline--tRNA ligase [Lactobacillus iners ATCC 55195] Length = 487 Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats. Identities = 109/273 (39%), Positives = 143/273 (52%), Gaps = 3/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DA SH+LMLR G I Q + G+Y++LPL L II EE Sbjct: 16 MRQSILFIPTLKEVPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLAYLVLRKAEKIIEEE 75 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 EM +P A LW ESGR YG EM RL DR+ + + GPTHEE T+I Sbjct: 76 MENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKDRHGRESLLGPTHEETFTEIIGK 135 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 136 NIKSYKQMPIALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDKQFDDQKHA 195 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R G++ P+ A SG +GG S EF A GE + ++ D Sbjct: 196 YKKIFKRCGVEVYPVIANSGTMGGKNSTEFQAPAAIGEDVIATNETGTYSANLEMARSID 255 Query: 241 DI---ISLNSIVEQWTAPYAATSDVHNEKLFDS 270 +E+ P AT + +E L Sbjct: 256 TFSPEKEELKPLEKVATPDCATIEQLSEFLHVP 288 Score = 45.9 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 42/97 (43%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A N D + IEVGHIF GT Y+ M+A F +GK Sbjct: 391 DFKVNEFADLRTANAGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTNSMNAKFLDQNGKTQ 450 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 + MGSYGIG R+++A++E GI F Sbjct: 451 PIIMGSYGIGVTRMLSAIVEQHSTDNGIFLAKRSCSF 487 >gi|38233973|ref|NP_939740.1| threonyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129] gi|73919783|sp|Q6NGW2|SYT_CORDI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|38200235|emb|CAE49919.1| threonyl-tRNA synthetase [Corynebacterium diphtheriae] Length = 687 Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats. Identities = 64/455 (14%), Positives = 137/455 (30%), Gaps = 49/455 (10%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y L + + RD +L L + + G + P G + R Sbjct: 254 EYQLMMAEAEKRDHRRLGAELDLFS-FPDEIGSGFPVFHPNGGIVRLEMEEHSRRRHINA 312 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND------------KAMIYGPTHEE 112 G ++ P + DL+ +SG D Y M + + P + Sbjct: 313 GYSFVNTPHITKGDLFKKSGHLDFYADGMFPPMQLDGEVDEEGNVVKQAQDYYAKPMNCP 372 Query: 113 VMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSK 171 + IF S +SYR LP ++ +R E G+ R+R F DA+ + T + + Sbjct: 373 MHNLIFASRGRSYRELPLRLFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYC-TEDQLE 431 Query: 172 HSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFP 231 + + + GL + + + S + + Sbjct: 432 QELTSVLDFIISLLRDYGLDDFYLELST----------------KDPNKFVGSDEIWEKS 475 Query: 232 IPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG 291 A Y + + D++ ++S ++ F Sbjct: 476 TSILQRVATKSGLELVPDPAGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FNLP 528 Query: 292 TKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 ++ + + +DG K + + G++ V+ + G W I Sbjct: 529 ERF----NLEYTSSDGSKKRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVIGIP 584 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 + + EK+ L G D +++ + P ++ G++ Sbjct: 585 VA------DSFSEHLEKVTGMLRDNGVRASVDTSDDRMQKKIRNHTTGKVPFMLLAGARD 638 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + V + + +++ I + S+ Sbjct: 639 VEANAVSFRFLDGTQINGVPVDKAIGVITQWISSR 673 >gi|300858607|ref|YP_003783590.1| threonyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41] gi|300686061|gb|ADK28983.1| Threonyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41] gi|302206319|gb|ADL10661.1| Threonyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231] gi|302330876|gb|ADL21070.1| Threonyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002] gi|308276561|gb|ADO26460.1| Threonyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19] Length = 689 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 63/448 (14%), Positives = 130/448 (29%), Gaps = 49/448 (10%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + G + P G + R G ++ Sbjct: 261 EAEKRDHRRLGAELDLFS-FPDEIGSGFPVFHPNGGVVRLEMEEHSRRRHIAAGYSFVNT 319 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRND------------KAMIYGPTHEEVMTDIFR 119 P + DL+ +SG D Y M + + P + + IF Sbjct: 320 PHITKGDLFKKSGHLDFYADGMFPPMQLDGEIDEDGNVTKQAQDYYAKPMNCPMHNLIFA 379 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 S +SYR LP ++ +R E G+ R+R F DA+ + T + + + Sbjct: 380 SRGRSYRELPLRLFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYC-TEDQLEAELTSVL 438 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 + + GL + + + S + D Sbjct: 439 DFIISLLKDYGLDDFYLELST----------------KDPNKFVGSDEIWDLSTSILERV 482 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 A Y + + D++ ++S ++ F ++ Sbjct: 483 ATQSGLELVPDPAGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FNLPERF---- 531 Query: 299 SATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + + DG + G++ V+ + G W I + Sbjct: 532 NLEYTAPDGSKRRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVIGIPVA----- 586 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D E++ A+L + G D +++ + P V+ G++ V V Sbjct: 587 -DAFVDHLEEMMAQLRQRGIRADVDTSDDRMQKKIRNHTTGKVPFMVLAGARDVEAGAVS 645 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 + + +E+ + + Sbjct: 646 FRFLDGTQVNGVPVEKAVEIIDQWIRSR 673 >gi|189055088|dbj|BAG38072.1| unnamed protein product [Homo sapiens] Length = 711 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 147/445 (33%), Gaps = 44/445 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 294 KMLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNALIEFIRSE 351 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + P + +F Sbjct: 352 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEL-FALKPMNCPGHCLMFDH 410 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 411 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 469 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E D Sbjct: 470 FLRAVYSVFGFSFKLN-LSTRPEKFLGDIE-----------------VWDQAEKQLENSL 511 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 512 NEFGEKWELNSGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 560 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 561 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 616 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ + D D G + + A L + ++VG K V Sbjct: 617 --TCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFTLVVGEKEKISGTV 674 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 I+ R + + ++ E I Sbjct: 675 NIRTRDNKVHGERTISETIERLQQL 699 >gi|134292577|ref|YP_001116313.1| threonyl-tRNA synthetase [Burkholderia vietnamiensis G4] gi|134135734|gb|ABO56848.1| threonyl-tRNA synthetase [Burkholderia vietnamiensis G4] Length = 402 Score = 203 bits (517), Expect = 4e-50, Method: Composition-based stats. Identities = 76/426 (17%), Positives = 137/426 (32%), Gaps = 41/426 (9%) Query: 17 DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS 76 D + +KL L S G W P G + IR + G E+ P + S Sbjct: 5 DHRVLGNKLDLF--HQQDESPGGIFWHPRGMVLYRVIEEYIRVRMRQAGFSEVRTPQILS 62 Query: 77 ADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 DLW SG ++ +G M L + + P IF+ +SYR+LP + + Sbjct: 63 RDLWERSGHWEKFGPNMFSL-ESDRNPYCLKPMSCPCHVQIFKKGSRSYRDLPIRYCEFG 121 Query: 137 LKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 R E G+MR+R F DA+ L P+ + + I+ G + Sbjct: 122 AVHRAEPSGALHGLMRARAFTQDDAHVLCL-PDQIEDEVARFCKLLKAIYADFGFGECDV 180 Query: 196 RAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP 255 + P D + +I+ A Sbjct: 181 ALSTRPPVR-----------------AGDDAVWDRSEAMLASAARAAGLEFAILAGEGAF 223 Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD-HYVQM 314 Y + H L D + ++ G A++ DG V + Sbjct: 224 YGPKLEFH---LVDRQGRKWQCGTIQLDFVLPERLG--------ASYVAEDGAKATPVML 272 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 +G++ ++ ++G W ++ R ++ + Sbjct: 273 HHAVLGSLERFIGILLEHYEGWLPTWLAPDQIVVANIG------DDHRAFADRAASAFED 326 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +GC V D E++ + A L P+ I G K +V ++ R G + M+++ Sbjct: 327 IGCRVLRDFRAERLPRKIFDATELAAPIVAIAGRKEALAGEVSLRMRG-GEQHVMTIDAA 385 Query: 435 INYASH 440 + + Sbjct: 386 LAFLKQ 391 >gi|260940036|ref|XP_002614318.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] gi|238852212|gb|EEQ41676.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] Length = 722 Score = 203 bits (517), Expect = 4e-50, Method: Composition-based stats. Identities = 78/452 (17%), Positives = 159/452 (35%), Gaps = 42/452 (9%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E RD + L ++ S G WLP G + + + ++REE + G Sbjct: 303 LKFLKEASERDHRKIGKEQELF--YFNEVSPGSAFWLPHGTRIYNTLVDMLREEYRQRGY 360 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + + LW SG + +Y + M D P + +F+S +SYR Sbjct: 361 EEVITPNMYNTKLWEISGHWGNYKENMFSFEVEKDT-FGLKPMNCPGHCVLFKSRERSYR 419 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP+ + R+E G+ R R F DA+ F + + +F +++ Sbjct: 420 ELPWRVADFGVVHRNEFSGALSGLTRVRRFQQDDAHIFCEQDQIEQE-IAGVFDFLQKVY 478 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G + + P E A+ + N + Sbjct: 479 GTFGFEFKM-ELSTRPEKYVGDLETWNGAEKNL-------------ENALNKFMGE--GK 522 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + A Y D+ K+ D+L + + ++ F +Y ++ Sbjct: 523 WELNPGDGAFYGPKIDI---KISDALRRWFQCATIQLDFQMPQRFELEYKRDSNSK---E 576 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 + V + +G++ + A++ + WP ++P +I ++ + + Sbjct: 577 NSMARPVMIHRAILGSVERMTAILT---EHYKGKWPFWLSPRQILVVPVGVK---YFEYA 630 Query: 366 EKIYARL-SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 E++ L K D G + + +L + IVG + ++ V I++R Sbjct: 631 EQLKDELVKKHKFYADVDLSGNTLQKKVRNGQMLKYNFIFIVGEQEQAEHSVNIRNRDIQ 690 Query: 425 IRE----DMSLEEVIN---YASHRFSNNRPVL 449 + + EEV+ ++ ++ Sbjct: 691 EEQGKNATVKFEEVVAQLTKLKEELRSDNKLI 722 >gi|325679048|ref|ZP_08158642.1| threonine--tRNA ligase [Ruminococcus albus 8] gi|324109172|gb|EGC03394.1| threonine--tRNA ligase [Ruminococcus albus 8] Length = 648 Score = 203 bits (517), Expect = 4e-50, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 141/445 (31%), Gaps = 38/445 (8%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L ++E RD +L T + +G+ LP G K + + I +E+ R G Sbjct: 233 LKQMEEAKLRDHNKLGRELDYFTT-VDYIGQGLPILLPKGAKVIQTLQRWIEDEEYRRGY 291 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEML---RLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 P + +L+ SG +D Y M D + P +F + + Sbjct: 292 QLTKTPFMSKRELYKISGHWDHYRDGMFILGDPDDETKECFALRPMTCPFQYQVFLNRKR 351 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + FR E G++R R+F + + + + Sbjct: 352 SYRDLPMRLGETSTLFRKEDSGEMHGLIRVRQFTISEGHLIIRPEQLEDEF--------- 402 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPSENTDFDD 241 + L E+ + D+S+ F + + + + + DD Sbjct: 403 ----KGCLALAKYCLETIGLAEDVSYRFSQWDPANPNNKYEGTAEQWEEAQGAMKKILDD 458 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I I A Y D+ + +F + + I++ + + Sbjct: 459 IGLDYEIGIDEAAFYGPKLDIQIKNVF---GKEDTLITIQIDM--------QIAKKFGME 507 Query: 302 FKGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + DGK + +G A++ + G +W + + Sbjct: 508 YVDKDGKMKMPYIIHRTSVGCYERTLALLIEKYAGVLPLWLAPEQVRILPIKP------E 561 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ + +G V D + IG + A P I+G V D V ++ Sbjct: 562 HNDYAYELAEEMRDLGMRVEVDGEDDNIGPKIKQARFDRVPYMFIIGDNEVKDRTVTVRS 621 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R G M + + I Sbjct: 622 RKEGELPAMPVADAIAKLKEEIDTK 646 >gi|259503119|ref|ZP_05746021.1| proline-tRNA ligase [Lactobacillus antri DSM 16041] gi|259168985|gb|EEW53480.1| proline-tRNA ligase [Lactobacillus antri DSM 16041] Length = 578 Score = 203 bits (517), Expect = 4e-50, Method: Composition-based stats. Identities = 109/263 (41%), Positives = 151/263 (57%), Gaps = 2/263 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P +ENP DAE SH +M R G I+Q S G++++LPL + + V II+EE Sbjct: 1 MKQSKLLIPTKKENPSDAEALSHIMMERAGYIYQISAGVWAYLPLAYRVIRKVKGIIQEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA EM P++ ADLW ++GRY++YG + + D ND+ I GPT EE MT+I R Sbjct: 61 MEKAGAYEMETPSMLPADLWRQTGRYEAYGDTLYKFKDHNDREYILGPTDEEAMTEILRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQI KFR+E RPR+GV+R +EF M DAYSF EG +Y + Sbjct: 121 SVKSYKKLPLVVYQITDKFRNEPRPRYGVLRGKEFSMLDAYSFAADEEGLDEAYQAQAKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG IGGD S EF A+ GE + + + FD Sbjct: 181 YHNIFDRAGLHYKVILADSGTIGGDNSQEFSAPAEIGEDVIVYTDGGYAANLEKATAKFD 240 Query: 241 DI--ISLNSIVEQWTAPYAATSD 261 + + +E+ P A T D Sbjct: 241 AVQQTAEPGKLEKKATPGAHTVD 263 Score = 160 bits (404), Expect = 5e-37, Method: Composition-based stats. Identities = 65/179 (36%), Positives = 99/179 (55%), Gaps = 2/179 (1%) Query: 261 DVHNEKLFDSLPEN-KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 D N + + P+ GIE+GHIF GT YS + A +G+ + MG YGI Sbjct: 387 DFRNVQEGEIAPDGYPIKFTNGIEIGHIFKLGTGYSKKLGAQVLDKNGRLVDMIMGCYGI 446 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G R+++AV E + D G++WPDS+APF + +I + A ++ +L+ G +V Sbjct: 447 GVTRMLSAVAEQNADENGLVWPDSIAPFDVHVIPVNAKKDEQMAMANELEQQLTAAGYEV 506 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 DD E+ G +FA +DL+G PL+V VG K +D VE+K R TG ++ EE++N Sbjct: 507 LVDDRKERAGVKFADSDLIGIPLRVTVGKK-AADGIVEVKIRKTGETLEVKQEELVNTV 564 >gi|253580110|ref|ZP_04857377.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251848629|gb|EES76592.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 653 Score = 203 bits (517), Expect = 4e-50, Method: Composition-based stats. Identities = 66/448 (14%), Positives = 152/448 (33%), Gaps = 37/448 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++ + + RD ++ + T + +G+ +P G + + I +E+ Sbjct: 226 LKEHLEQMEEAKKRDHNKLGREMKIFTT-VDVIGQGLPLIMPNGVIMMQELQRWIEDEET 284 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRS 120 + G I P + +DL+ SG +D Y + M + + + P ++++ Sbjct: 285 KRGYIRTKTPLMAKSDLYKISGHWDHYKEGMFVLGDEETDKEVFALRPMTCPFQYYVYKA 344 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 SYR+LP + + FR+E G+ R R+F + + + + K + Sbjct: 345 EQHSYRDLPLRYGETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVRPDQMVKE-FKDCIA 403 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTD 238 LG++ + D + + + + Sbjct: 404 LAQYCLQVLGVEEDVTY-------------HLSKWDPNNREKYIGDAEVWNQTEAHIRQM 450 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 +++ + A Y D++ + ++ + + + F Sbjct: 451 LEELNIPFTEDVGEAAFYGPKVDINAKNVY---GKEDTMITIQWDALLAEQFD------- 500 Query: 299 SATFKGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + +G+ + +G A + + ++P + P ++ +I I Sbjct: 501 -MYYIDENGEKQRPYIIHRTSMGCYERTLAWLI---EKYAGMFPTWLCPEQVRVIPI--- 553 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + + K+ A+L + G D E++G + A L P +IVG+K + KV Sbjct: 554 SEKFHNYAAKVEAQLKENGIRCSVDQRSEKMGYKIREARLARVPYMLIVGAKEEEEGKVS 613 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ R G L + + N Sbjct: 614 VRSRYLGDEGMKDLGDFLAAIKEEIKNK 641 >gi|225021291|ref|ZP_03710483.1| hypothetical protein CORMATOL_01310 [Corynebacterium matruchotii ATCC 33806] gi|224946024|gb|EEG27233.1| hypothetical protein CORMATOL_01310 [Corynebacterium matruchotii ATCC 33806] Length = 700 Score = 203 bits (517), Expect = 4e-50, Method: Composition-based stats. Identities = 59/458 (12%), Positives = 124/458 (27%), Gaps = 51/458 (11%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD +L L + + G + P G + R Sbjct: 265 LAEYQHKMAEAEKRDHRRLGQELDLFS-FPDEIGSGFPVFHPNGGIVRLEMEEHSRRRHI 323 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK------------AMIYGPTH 110 G ++ P L +L+ +SG D Y M + + P + Sbjct: 324 AAGYSFVNTPHLTKGELFEKSGHLDFYADGMFPPMKLDGEVDADGNVTKPAVDYYVKPMN 383 Query: 111 EEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEG 169 + IF S +SYR LP ++ +R E G+ R+R F DA+ + T + Sbjct: 384 CPMHNLIFASRGRSYRELPLRLFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYC-TEDQ 442 Query: 170 SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMD 229 + + + + GL + + + S + + Sbjct: 443 LEAELTSVLDFVISLLRDYGLDDFYLELST----------------KDPEKFVGSDEIWE 486 Query: 230 FPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY 289 D A Y + + D++ ++S ++ F Sbjct: 487 KSTAILQRVADKSGLDLVPDPGGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FN 539 Query: 290 FGTKYSLPMSATFKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPF 347 ++ + DG M + R ++E Sbjct: 540 LPDRF----HLEYTAPDGTKKQPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPQQVMG 595 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 H + L G D +++ + P ++ G Sbjct: 596 IPVADTFVPHLESVI-------NELQARGVRASVDTSDDRMQKKIRTYTQAKVPFMLLAG 648 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ V V + + + + I+ + Sbjct: 649 ARDVEAQAVSFRFLDGSQLNGVPVAQAISLIDEWVRSR 686 >gi|157127485|ref|XP_001655003.1| prolyl-tRNA synthetase [Aedes aegypti] gi|108872928|gb|EAT37153.1| prolyl-tRNA synthetase [Aedes aegypti] Length = 435 Score = 203 bits (517), Expect = 4e-50, Method: Composition-based stats. Identities = 142/454 (31%), Positives = 222/454 (48%), Gaps = 43/454 (9%) Query: 2 RRSKYFLPIL---QEN---PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNA 55 + SK F P L + +D S +LML G++ Q G + LPL Q+++ Sbjct: 3 KLSKIFQPSLIIPKNAIVKNQDITSKSQRLMLEQGLMRQAGNGTFYILPLLQRSVQKAID 62 Query: 56 IIREEQNR-TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM 114 ++ GA ++++P L SADLW +SGR ++ G E++ DR+ K I GPTHEE + Sbjct: 63 LVDHHMQHFAGAEKLTLPILTSADLWRKSGRLETAGGELMSTTDRHGKRQILGPTHEESI 122 Query: 115 T-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 T + SYR P YQI KFRDE++PRFG+MR++EFLMKD Y+FD+ ++ + Sbjct: 123 TALLAAISPVSYRQFPLRLYQISTKFRDEMKPRFGLMRAKEFLMKDLYTFDVGLAEARQT 182 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y + +Y R+F +G+ + +R ++G +GG SHE+ ++ GE Q+ C Sbjct: 183 YEVVNEAYRRLFEAVGVPFVKVRGDTGVMGGSTSHEYHFPSEVGEDQLVCCSVC------ 236 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 + E + EK + + GIEVGH F K Sbjct: 237 ----------GMGCNQEMFDG----------EKACERCNNSNIGRQAGIEVGHAFILEDK 276 Query: 294 YSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 YS + A F +GK +QMG YGIG R++AA +E K I WP ++APFK+ LI Sbjct: 277 YSKALGAMFLNQNGKPEALQMGCYGIGITRLIAAGVEVLSSEKEIRWPRALAPFKVCLIP 336 Query: 354 IKA--HDQVCRD----ACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIV 406 K ++ + E ++LS VG +V DD IG + A G+P+ V++ Sbjct: 337 PKKGSKEESLVEPWLHRLEDEVSKLSSVGSEVVVDDRTSLTIGKRLLDAKKTGYPVVVVI 396 Query: 407 GSKFVSDSK--VEIKHRLTGIREDMSLEEVINYA 438 G K + E+ ++ ++ + E + Sbjct: 397 GPKAADEGAELFEVHNQTDETQKLLGFSETVKEI 430 >gi|209526622|ref|ZP_03275147.1| threonyl-tRNA synthetase [Arthrospira maxima CS-328] gi|209492990|gb|EDZ93320.1| threonyl-tRNA synthetase [Arthrospira maxima CS-328] Length = 604 Score = 203 bits (517), Expect = 4e-50, Method: Composition-based stats. Identities = 61/436 (13%), Positives = 136/436 (31%), Gaps = 33/436 (7%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD +L L Q G+ W P G + ++ EQ R G + Sbjct: 196 EEALRRDHRRLGKELGLFI-FSDQVGPGLPLWTPKGTILRTTLEDFLKREQVRRGYQPVV 254 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHIKSYRNLP 129 P L +L+ SG + Y +++ + ++ + + I++S ++SYR LP Sbjct: 255 TPHLGRVNLFKTSGHWQKYREDLFPMMGESEDEGFVLKAMNCPFHVQIYKSSLRSYRELP 314 Query: 130 FTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + +R E G + +D +TPE + K+ + +L Sbjct: 315 IRLAEFGTVYRYEQSGELGGLTRVRGFTQDDAHLFVTPEQLDDEFLKVVDLIQSVLKKL- 373 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + + + D + S + + + + Sbjct: 374 ------KLDQSFKAR------LSFRDPNSDKYIGSDQAWEKAENAIRRAVETLGMNYFEG 421 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D + D+L ++ ++ + DG Sbjct: 422 IGEAAFYGPKLDFI---VQDALEREWQLGTVQVDYNLP--------ERFDLEYVAEDGTR 470 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + G++ + ++ + G +W ++ + E + Sbjct: 471 QRPVMIHRAPFGSLERLIGILIEEYTGDFPLW------LAPVMVRLLPVSDEFFPFVESV 524 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 + + D +++G A+ P+ +VG+K V + + I+ R G Sbjct: 525 AEKWRSLDIRAEADHSHDRLGKMIRNAEKAKVPVMAVVGAKEVESNSLSIRTRALGELGT 584 Query: 429 MSLEEVINYASHRFSN 444 +++ E + +N Sbjct: 585 LTVAETQSRLQFALAN 600 >gi|320590732|gb|EFX03175.1| threonyl-tRNA synthetase [Grosmannia clavigera kw1407] Length = 752 Score = 203 bits (517), Expect = 4e-50, Method: Composition-based stats. Identities = 85/480 (17%), Positives = 161/480 (33%), Gaps = 64/480 (13%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S Y + + +D L H+ S G +LP G + + + I E + Sbjct: 287 LSDYMKFLEEAAKKDHRRIGQDQELF--FFHKLSPGSPFFLPHGMRIFNALKEFILSEYH 344 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + +E+ P + +ADLW SG ++ Y ++M L + + P + IF S Sbjct: 345 KRDYVEVMSPNMFNADLWRTSGHWEHYQEDMFTL-EVEKQQWALKPMNCPGHCVIFGSRE 403 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR LP + + R+E G+ R R F+ D++ F + +F Sbjct: 404 RSYRELPLRMAEFGILHRNEASGALSGLTRVRRFIQDDSHIFCEEDQIGSE-IRDLFDFL 462 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 ++ +LG+K ++ + P + E A+ + + Sbjct: 463 RTVYGKLGMKF-RLKLSTRPEKYLGNLETWDKAEATLQH-------------ALEEFTKE 508 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFG---------- 291 + S+ A Y D+ ++ D+L + + ++ F Sbjct: 509 SGAEWSLNPGDGAFYGPKIDI---QIMDALRRWHQCATLQLDFQLPQQFNLSYMTAASSN 565 Query: 292 --------TKYSLPMSATFKG----------------ADGKDHYVQMGSYGIGAMRVVAA 327 T + P+ A K A G V + +G+ A Sbjct: 566 SDGKAEAKTVETKPVEAETKDGKDDSKAVTASAAQTLAPGYSRPVMIHRAVLGSFERFIA 625 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 + GK W + ++ D ++ L G V D Sbjct: 626 TLSEHFAGKWPFWLSPRQILLVPVM------ADAEDYVREVQKVLKARGFYVDSDLGANT 679 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT-GIREDMSLEEVINYASHRFSNNR 446 + + +L + ++GSK + D V I+ R + G +SL+ V+ S R + Sbjct: 680 MNKKIRNGQVLQYNFIFVLGSKEMQDRSVSIRVRDSKGDLTTLSLDVVVERLS-RLRETK 738 >gi|242791014|ref|XP_002481676.1| threonyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC 10500] gi|218718264|gb|EED17684.1| threonyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC 10500] Length = 724 Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats. Identities = 73/461 (15%), Positives = 141/461 (30%), Gaps = 54/461 (11%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E R+ + + L S G LP G K + + ++R E + G Sbjct: 291 LKFLEEAEKRNHQKIGKEQELF--FFDDVSPGCPFLLPHGTKIFNALQKLLRAEYRKRGY 348 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + +W SG + Y +M +L D + P + +F +SYR Sbjct: 349 QEVQTPNMYDVGIWKTSGHWAHYSDDMFKL-DVEKREWALKPMNCPGHFMLFGHRERSYR 407 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP + R+E G+ R R+F D++ F + + + +F ++ Sbjct: 408 ELPLRIADFGVLHRNEASGALHGLTRVRKFQQDDSHIFCTSEQITSE-IEGIFDFLKSVY 466 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G ++ + P E ++ ++ Sbjct: 467 GLFGFTF-KLKLSTRPEKYMGELE-----------------AWNYAEEQLRQALNNFKGD 508 Query: 246 NSIV-EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY---------- 294 + + E A Y D+ + D+L + + + ++ F +Y Sbjct: 509 DWEINEGDGAFYGPKIDI---TISDALKRDFQCATIQLDYQAPINFKLEYITNEKQAGSD 565 Query: 295 -----SLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKI 349 A A+ V + R + +IE Sbjct: 566 AKANKDDTEKAKESNANRARPVVIHRAIIGSFERFLGILIEHFAGKWPFWLSPRQILIVP 625 Query: 350 SLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 + + D +++ L +V D G + + L + +VG++ Sbjct: 626 VMPALN-------DYAKELQENLLADKFNVDVDVSGNTLQKKIRTGQLAQYNFIFVVGAQ 678 Query: 410 FVSDSKVEIKHRLTGIR----EDMSLEEVINYASHRFSNNR 446 V I++R E +SLEE R Sbjct: 679 EKESRSVNIRNRDDPSSHAKGELISLEEARVKLKALRKERR 719 >gi|328779973|ref|XP_001122171.2| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like [Apis mellifera] Length = 428 Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats. Identities = 114/418 (27%), Positives = 200/418 (47%), Gaps = 46/418 (11%) Query: 2 RRSKYFLP------ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNA 55 + S+ F P ++ + S++ +L+ G+I Q + G+Y+ LPLG + + + A Sbjct: 11 KLSQLFQPVTATIATTKQT--EIRSKSYENLLKYGLIKQVTTGMYAILPLGLRIFNKLTA 68 Query: 56 IIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMT 115 ++ E + GA ++ +P L LW ++ R ++ E+ ++ DR + I PTHEE + Sbjct: 69 LVDNEMQKIGAQKLLLPALTPTHLWKKTDRLNNV-TELFKIQDRAQRQYILSPTHEESIC 127 Query: 116 DIFRS-HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSY 174 + + I S + LP YQI K+RDE++PRFG +RSREF+MKD Y+FD+ ++ +Y Sbjct: 128 SVMSTIGILSPKMLPLKLYQISNKWRDEIKPRFGFLRSREFMMKDLYTFDINLNNAQETY 187 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS 234 + +Y IF ++G+ I + G IG +SHE+ ++D GE + C + I Sbjct: 188 ALVCNAYENIFKKIGITYIKSIGDPGLIGDSISHEYHYISDIGE-DIVCICPSCQYSIN- 245 Query: 235 ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR--GIEVGHIFYFGT 292 T + P+ K EVGH F T Sbjct: 246 -KTICKES---------------------------YCPKCKNAFNEKSAAEVGHTFLLNT 277 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 KY++P+ K + + + MG +G+G R+ + E + + WP ++AP+ + LI Sbjct: 278 KYTIPLEVKIK-INNESIPLVMGCFGLGLSRIFTVMTELLSTKEELRWPKNLAPYTVCLI 336 Query: 353 NIKA--HDQVCRDACEKIYARLSKVGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVG 407 KA ++ +++ L+++ D DD IG +F A + GFP +I+ Sbjct: 337 PPKAGSKEENKSQYVKEVMEILNQLNIDTILDDRTNLTIGKRFMHARITGFPYVIIID 394 >gi|289620774|emb|CBI52508.1| unnamed protein product [Sordaria macrospora] Length = 792 Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats. Identities = 79/478 (16%), Positives = 152/478 (31%), Gaps = 69/478 (14%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD + + L + S G WLP G + + + I+EE + G E+ Sbjct: 314 LEEAAKRDHRLIGKQQELF--YFEECSPGSAMWLPHGMRINNAIMEYIKEEYWKRGYDEV 371 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P + + LW +SG Y +M L D + + P + +FR +S++ LP Sbjct: 372 MTPNMFNTSLWEQSGHLAHYKDDMFIL-DVDKEQFGLKPMNCPAHAMMFRHRDRSHKELP 430 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 + R+E G+ R R F DA+ F + K +F + L Sbjct: 431 LRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCR-EDQIKAEVADLFDFMKSFYGML 489 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 GL ++ + P E A+ + + N + Sbjct: 490 GLTFK-LKLSTRPEKYMGEIETWDRAEARLKE-------------ALNEFTASTGGTWEL 535 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA--- 305 E A Y D+ + D L + + ++ F +Y + + Sbjct: 536 NEGDGAFYGPKIDI---AVLDCLNRPWQCATIQLDFQQPINFSLEYMTAETQAKQDESKL 592 Query: 306 ----------------------------------DGKDHYVQMGSYGIGAMRVVAAVIES 331 G V + G++ A++ Sbjct: 593 APKAPEPEAPKEEEAPKEGEDKKKKPLLVKKPLAPGCARPVMIHRAMAGSIERFTAILA- 651 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 + WP ++P ++ +I + D +++ L K V D G + + Sbjct: 652 --EHFAGKWPFWMSPRQVMVIPVGMG---FLDYAKEVALTLKKEKIHVDVDSSGNTLQKK 706 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED----MSLEEVINYASHRFSNN 445 A L + +VG ++ KV I++R + L E ++ ++ Sbjct: 707 IRSAQLAQYNFIFVVGDDEKTNRKVNIRYRDDTSTQARDVPYPLSEAVDKLRALKADR 764 >gi|305681479|ref|ZP_07404286.1| threonine--tRNA ligase [Corynebacterium matruchotii ATCC 14266] gi|305659684|gb|EFM49184.1| threonine--tRNA ligase [Corynebacterium matruchotii ATCC 14266] Length = 687 Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats. Identities = 62/457 (13%), Positives = 131/457 (28%), Gaps = 49/457 (10%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD +L L + + G + P G + R Sbjct: 252 LAEYQHKMAEAEKRDHRRLGQELDLFS-FPDEIGSGFPVFHPNGGIVRLEMEEHSRRRHI 310 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK------------AMIYGPTH 110 G ++ P L +L+ +SG D Y M + + P + Sbjct: 311 AAGYSFVNTPHLTKGELFEKSGHLDFYADGMFPPMKLDGEVDADGNVTKPAVDYYTKPMN 370 Query: 111 EEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEG 169 + IF S +SYR LP ++ +R E G+ R+R F DA+ + T + Sbjct: 371 CPMHNLIFASRGRSYRELPLRLFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYC-TEDQ 429 Query: 170 SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMD 229 + + + + GL + + + S + + Sbjct: 430 LEAELTSVLDFVISLLRDYGLDDFYLELST----------------KDPEKFVGSDEIWE 473 Query: 230 FPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY 289 D A Y + + D++ ++S ++ F Sbjct: 474 KSTAILQRVADKSGLDLVPDPGGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FN 526 Query: 290 FGTKYSLPMSATFKGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFK 348 ++ + DG K + + G++ V+ + G W Sbjct: 527 LPDRF----HLEYTAPDGTKKQPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPQQVMG 582 Query: 349 ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGS 408 I + E + L G D +++ + P ++ G+ Sbjct: 583 IPVA------DTFIPHLESVINELQARGVRASVDTSDDRMQKKIRTYTQAKVPFMLLAGA 636 Query: 409 KFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 + V V + + + + I+ + Sbjct: 637 RDVEAQAVSFRFLDGSQLNGVPVAQAISLIDEWVRSR 673 >gi|153812461|ref|ZP_01965129.1| hypothetical protein RUMOBE_02860 [Ruminococcus obeum ATCC 29174] gi|149831386|gb|EDM86474.1| hypothetical protein RUMOBE_02860 [Ruminococcus obeum ATCC 29174] Length = 657 Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats. Identities = 65/448 (14%), Positives = 151/448 (33%), Gaps = 37/448 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++ + + RD ++ + T + +G+ +P G + + I +E+ Sbjct: 226 LKEHLEQMEEAKKRDHNKLGREMKIFTT-VDVIGQGLPLIMPNGVIMMQELQRWIEDEET 284 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRS 120 + G + P + +DL+ SG +D Y M + + + P ++++ Sbjct: 285 KRGYVRTKTPLMAKSDLYKISGHWDHYKDGMFVLGDEETDKEVFALRPMTCPFQYYVYKA 344 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 SYR+LP + + FR+E G+ R R+F + + + + K + Sbjct: 345 EQHSYRDLPLRYGETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVRPDQMVKE-FKDCIA 403 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTD 238 LG++ + D + + + + + Sbjct: 404 LAQYCLQVLGVEEDVTY-------------HLSKWDPNNREKYIGEPEVWNETEEDIRQM 450 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 +++ + A Y D++ + ++ + + + F Sbjct: 451 LEELNIPFTEDVGEAAFYGPKVDINAKNVY---GKEDTMITIQWDALLAEQFD------- 500 Query: 299 SATFKGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + +G + +G A + + ++P + P ++ +I I Sbjct: 501 -MYYIDENGDKKRPCIIHRTSMGCYERTLAWLI---EKYAGMFPTWLCPEQVRVIPI--- 553 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + +K+ A++ + G D E++G + A L P ++VG+K + KV Sbjct: 554 SEKFNAYADKVEAQMKEAGIRCSVDRRSEKMGYKIREARLERVPYMLVVGAKEEEEGKVS 613 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ R G L E I N Sbjct: 614 VRSRYLGDEGMKDLGEFIAAIKEEIKNK 641 >gi|154300294|ref|XP_001550563.1| hypothetical protein BC1G_11336 [Botryotinia fuckeliana B05.10] gi|150856659|gb|EDN31851.1| hypothetical protein BC1G_11336 [Botryotinia fuckeliana B05.10] Length = 787 Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats. Identities = 79/474 (16%), Positives = 150/474 (31%), Gaps = 63/474 (13%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD L H+ S G WLP G + + + + +RE+ G E+ Sbjct: 320 LEEAAKRDHRKLGKDQELF--FFHEMSPGSAMWLPHGARIYNTIMSFLREQYWTRGYEEV 377 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P + +++LW SG + Y +M D P + +F +S+R LP Sbjct: 378 ITPNMYNSELWKTSGHWAYYKDDMFTFPVEKDT-FALKPMNCPGHCLMFGHRERSHRELP 436 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 + + R+E G+ R R F DA+ F + +F I+ L Sbjct: 437 WRVADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCREDQIKDE-ITGLFDFLKAIYGLL 495 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 G + P E +A+ + D + Sbjct: 496 GFTFKLN-LSTRPEKYLGKLETWDMAEEKLRSAL------------DEFAATDGGVPWVL 542 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA--- 305 E A Y D+ + D L + + ++ FG +Y+ T K Sbjct: 543 NEGDGAFYGPKIDI---TICDVLKREWQCATIQLDFQLPQNFGLEYNTGDVPTKKDEEAV 599 Query: 306 -----------------------------DGKDHYVQMGSYGIGAMRVVAAVIESSHDGK 336 G V + G++ A++ + Sbjct: 600 KEPVVKPKKTTEPEDPNAPPKERVYKPLTPGCARPVMIHRAMAGSIERFTAILI---EHF 656 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVAD 396 WP ++P +I +I + + +++ + K + D G + + Sbjct: 657 AGKWPFWLSPRQILVIPVGVG---YFEYAKEVQSIFHKQQMFIDVDLSGNTLQKKIRTGQ 713 Query: 397 LLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED----MSLEEVINYASHRFSNNR 446 L + +VG + +V +++R +D +SL+E I + R Sbjct: 714 LAQYNFIFVVGDTEMKGREVNVRNRDDTSSQDRGKPVSLQEAIEKLTALRDERR 767 >gi|284929738|ref|YP_003422260.1| prolyl-tRNA synthetase, family II [cyanobacterium UCYN-A] gi|284810182|gb|ADB95879.1| prolyl-tRNA synthetase, family II [cyanobacterium UCYN-A] Length = 606 Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats. Identities = 112/240 (46%), Positives = 150/240 (62%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK L+E+P +AEI SHKL+LR+ I + S GIYS+LPL + L + IIREE Sbjct: 1 MQLSKVLFVTLREDPAEAEIISHKLLLRSCYIRRVSSGIYSYLPLMWRVLRKTSQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N G E +P LQ +DLW ESGR+ +Y + M L DR ++ + GPTHEEV+T I Sbjct: 61 MNSIGGQECLLPQLQISDLWEESGRWKTYTEAEGIMFSLIDRQNRELALGPTHEEVVTSI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 R + SY+ +P YQIQ KFRDE+RPRFG+MRSREF+MKDAYSFD E + +Y+ + Sbjct: 121 VRDMVVSYKQMPLNLYQIQTKFRDEIRPRFGLMRSREFIMKDAYSFDENLENLQKNYDMV 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y I R GL + A+SG IGG S EF+VL D GE ++ ++D + E Sbjct: 181 SQAYCNILKRCGLSFKVVEADSGTIGGLASQEFMVLTDVGEDEILYTEDNS-YAANVEKA 239 Score = 156 bits (393), Expect = 8e-36, Method: Composition-based stats. Identities = 70/189 (37%), Positives = 109/189 (57%), Gaps = 4/189 (2%) Query: 261 DVHNEKLFDSLPEN---KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 DV K D + EN + +S +G+EVGH+F GTKYS M ATF +G++ + MG Y Sbjct: 413 DVRRAKEGDKISENSQERLISKKGVEVGHVFQLGTKYSKKMKATFTDKNGEEKPIVMGCY 472 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+V + +E +HD GIIWP ++AP+ +I ++ + EKIY L+ +G Sbjct: 473 GIGVSRLVQSAVEQNHDKHGIIWPLAIAPYHAIIIVPNVKEKQQMEIAEKIYYDLNSIGI 532 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 + DD E+IGS+F A+L+G P Q++ G + + KVE+ R T +++ +EE+ Sbjct: 533 ETILDDRTERIGSKFKDAELIGIPYQIVTG-RTLKFGKVEVVDRKTKNSQEVIIEELPKL 591 Query: 438 ASHRFSNNR 446 F N + Sbjct: 592 FHEFFKNIK 600 >gi|325479231|gb|EGC82327.1| proline--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13] Length = 572 Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats. Identities = 113/283 (39%), Positives = 173/283 (61%), Gaps = 3/283 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SKY++P L+E+P DAE ASHK + R I + + G+YS+LPLG+K ++ + AI+RE Sbjct: 1 MRLSKYYMPTLREDPVDAETASHKYLTRGAFIRKQASGVYSFLPLGKKVINKIEAIVRES 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +IE+S LQ+ ++W SGR++++G EM +L DR+++ GPT EE TD+ ++ Sbjct: 61 MENHDSIEVSTSILQAKEIWETSGRWETFGPEMFKLEDRHNRQYCLGPTAEEAFTDLIKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQI KFRDE RPRFG+ RSR+FLMKDAYSFD + EG + SY KM+ + Sbjct: 121 ELNSYKQLPLNIYQIVDKFRDEKRPRFGINRSRDFLMKDAYSFDASYEGLELSYQKMWDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y+ F ++GL+ + +SG +GG SHEFI L++TGE + + D+ E F Sbjct: 181 YVEAFDKMGLEYKIVEGDSGSMGGRKSHEFIALSETGEGVILYTDS-SDYAATDEKARFK 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 + E + + E++ L E+ + A+ ++ Sbjct: 240 QEFVDEAEKELELVETVGKTTI--EEVSSYLSEDPKHFAKAVD 280 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 67/174 (38%), Positives = 94/174 (54%), Gaps = 1/174 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 +ARGIEVG+IF GTKYS + A F +GK MGSYGIG R V+A++E Sbjct: 396 GSGILKAARGIEVGNIFQLGTKYSESLEAYFLDENGKQQPFIMGSYGIGISRSVSAIVEQ 455 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 HD KGI+WP SVAPF+ + I + + ++ E+IY +L + DV DD E+ G + Sbjct: 456 YHDDKGILWPTSVAPFEAIVTIINPNKEDQKELGEEIYNKLKEERIDVLLDDRKERAGVK 515 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 F DL+G P ++ VG K SD VE R E ++++ I + Sbjct: 516 FNDRDLIGIPYRITVG-KDASDEIVEYSTRREMENEKITVDTAIEKIISSVKKD 568 >gi|315651290|ref|ZP_07904318.1| threonine--tRNA ligase [Eubacterium saburreum DSM 3986] gi|315486442|gb|EFU76796.1| threonine--tRNA ligase [Eubacterium saburreum DSM 3986] Length = 651 Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats. Identities = 72/447 (16%), Positives = 154/447 (34%), Gaps = 37/447 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE-EQN 62 + +L L++ RD ++ L T + +G+ LP G K + + I + E N Sbjct: 227 EAYLKHLEDIKLRDHNKLGREMELFTT-VDVVGQGLPLMLPKGTKMIQKLQRWIEDLEDN 285 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD--RNDKAMIYGPTHEEVMTDIFRS 120 G + P + +DL+ SG +D Y M L D + + + P ++++ Sbjct: 286 EWGYVRTKTPLMAKSDLYKISGHWDHYQDGMFILGDPQHDGEILALRPMTCPFQYYVYKN 345 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 KSYR+LP+ + FR+E G+ R R+F + + ++ + + N + + Sbjct: 346 TQKSYRDLPYRMGETSTLFRNEDSGEMHGLTRVRQFTISEGHNVIRPDQAEEELQNCLNL 405 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 + E+ + D++ + + + + + + Sbjct: 406 AI-------------YVLETLGLRDDVTFRLSKWDKNNKEKYLGDEAYWEGTQAALRNIL 452 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + + A Y D+ + ++ K + I + Sbjct: 453 VEKGLPFTEADGEAAFYGPKIDIQAKNVY-----GKEDTMITI------QLDAAIAENFD 501 Query: 300 ATFKGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + +G + +G A + + +P + P ++ ++ I Sbjct: 502 LYYIDQNGAKVRPYIVHRTSLGCYERTLAWLI---EKYAGKFPTWLCPEQVRILPISDK- 557 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D + L K G D D E+IG + A L P ++VG K ++ V + Sbjct: 558 --YADYANSVLKELKKNGVDATVDTRTEKIGFKIRDARLSRLPYMLVVGEKEEAEGSVSV 615 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R G L + ++ Sbjct: 616 RSRFAGDEGSKKLSDFVDMICKEIRTK 642 >gi|108799209|ref|YP_639406.1| threonyl-tRNA synthetase [Mycobacterium sp. MCS] gi|119868325|ref|YP_938277.1| threonyl-tRNA synthetase [Mycobacterium sp. KMS] gi|126434867|ref|YP_001070558.1| threonyl-tRNA synthetase [Mycobacterium sp. JLS] gi|122977050|sp|Q1B9T4|SYT_MYCSS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166225465|sp|A3PYU0|SYT_MYCSJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166225466|sp|A1UF79|SYT_MYCSK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|108769628|gb|ABG08350.1| Ser-tRNA(Thr) hydrolase [Mycobacterium sp. MCS] gi|119694414|gb|ABL91487.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Mycobacterium sp. KMS] gi|126234667|gb|ABN98067.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Mycobacterium sp. JLS] Length = 684 Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats. Identities = 66/451 (14%), Positives = 129/451 (28%), Gaps = 49/451 (10%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 I + RD +L L + + G+ + P G + R + + G + Sbjct: 254 IEEAQRRDHRKLGVELDLFS-FPDELGSGLPVFHPKGGIVRKELEDYSRAKHLQAGYEFV 312 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDI 117 + P + L+V SG + Y M + + P + + I Sbjct: 313 NTPHITKEQLYVTSGHLEWYADGMFPAMHIDAEYDADGAVRKPGQNYYLKPMNCPMHHLI 372 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 +RS +SYR LP ++ +R E G+ R R DA+ + + Sbjct: 373 YRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYATREQMRDEL-TS 431 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + L + GL + + + S + D + Sbjct: 432 LLQFVLDLLSDYGLDEYYLELST----------------KDPDKYVGSDEIWDEATETLR 475 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + A Y + ++ D+L N ++S ++ Sbjct: 476 EVAEASGLDLVPDPGGAAFYGPKI---SVQVKDALGRNWQMSTIQLDFNMP--------E 524 Query: 297 PMSATFKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 + ADG + G++ V+ + G W V I + Sbjct: 525 RFELEYTAADGSRQRPVLIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPVA--- 581 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 E + A+L G V D +++ + P ++ G K V+ Sbjct: 582 ---DAHIPYLEDVAAQLRSRGVRVEIDGSDDRMAKKIVNHTNQRVPFMLLAGDKDVAAGA 638 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 V + + +E + R Sbjct: 639 VSFRFGDRTQINGVPRDEAVEAIVGWIVERR 669 >gi|291550699|emb|CBL26961.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Ruminococcus torques L2-14] Length = 650 Score = 203 bits (516), Expect = 6e-50, Method: Composition-based stats. Identities = 70/448 (15%), Positives = 150/448 (33%), Gaps = 37/448 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++ + + RD ++ L T + +G+ +P G + + I +E+ Sbjct: 226 LKEHLTQLEEAKKRDHNKLGREMKLFTT-VDVIGQGLPLIMPNGVIIMQELQRWIEDEEA 284 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRS 120 + G I P + +DL+ SG +D Y + M +++ + P ++++ Sbjct: 285 KRGYIRTKTPLMAKSDLYKISGHWDHYKEGMFVLGDEEKDKEVFALRPMTCPFQYYVYKA 344 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 SYR+LP + + FR+E G+ R R+F + + + + K + Sbjct: 345 EQHSYRDLPLRYGETSTLFRNEDSGEMHGLTRVRQFTISEGHLVVRPDQMVKE-FKDCIA 403 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NTD 238 LG++ + D +T+ + + T Sbjct: 404 LAQYCLQVLGVEEDVTY-------------HLSKWDPTDTKKYIGAPEVWEETEGHIRTM 450 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 ++ A Y D++ + ++ + + + F Sbjct: 451 LQELNIPFVEDVGEAAFYGPKVDINAKNVY---GKEDTMITIQWDALLAEQFD------- 500 Query: 299 SATFKGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + +G + +G A + + ++P + P ++ +I I Sbjct: 501 -MYYIDENGDKQRPYIIHRTSVGCYERTLAWLI---EKYAGMFPTWLCPEQVRVIPISDK 556 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 D K+ A+L + D E++G + A L P +IVG+K + KV Sbjct: 557 ---YNDYAAKVEAQLKEANIRCSVDGRSEKMGYKIREARLNRVPYLLIVGAKEEEEQKVS 613 Query: 418 IKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ R G L E I + Sbjct: 614 VRSRYLGDEGSKDLGEFIEAIKDEIAKK 641 >gi|149173541|ref|ZP_01852171.1| threonyl-tRNA synthetase [Planctomyces maris DSM 8797] gi|148847723|gb|EDL62056.1| threonyl-tRNA synthetase [Planctomyces maris DSM 8797] Length = 726 Score = 203 bits (516), Expect = 6e-50, Method: Composition-based stats. Identities = 78/507 (15%), Positives = 149/507 (29%), Gaps = 99/507 (19%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIRE 59 M+ +Y + + RD + KL L + I+ + +G+ WLP G + I+ Sbjct: 234 MK--QYLEQVEEAKRRDHRVLGKKLGLFS--INPEVGQGLCLWLPKGATIRAVLEDFIKV 289 Query: 60 EQNRTGAIEMSVPTL--------------------------------------------- 74 E R G + P + Sbjct: 290 ELTRLGYQPVYSPHIGRVELYETSGHFPYYRDSQFAPLFGHDAGQLVDFWVRKLEEDSLS 349 Query: 75 -QSADLWVESGRYDSYGKEML------------RLADRNDKAMIYGPTHEEVMTDIFRSH 121 + +L+ +S R + E + + + + P + ++++S Sbjct: 350 AEDEELFFKSSRVMNCDFEFPPGASREEKLKILKAWEHKHERYLLKPMNCPHHAEMYKSM 409 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SYR+LP + +R E G++R R DA+ F TPE + + Sbjct: 410 PRSYRDLPVRLAEFGTVYRHEQTGELNGMLRVRGLTQDDAHIFC-TPEQVEEEFRATLEL 468 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + +GL + ++ + G + S++ S + Sbjct: 469 VKFVLASVGLDNFRVQLSLR--------------EPGSDKYVGSEENWQHAENSLRKVLE 514 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 S E A Y +D + D + ++ ++ Sbjct: 515 ASGMSYSECEGEAAFYGPKADFM---VSDCIGREWQLGTVQLDYNLP--------ERFKL 563 Query: 301 TFKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + G+D + H M R +IE + Sbjct: 564 EYTGSDNQPHRPVMIHRAPFGSMERFTGMLIEHFAGAFPLWLAPEQIRVLPV-------S 616 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 D ++ A+L K G V D ++ ++ A L P IVG K + V + Sbjct: 617 DKTLDYANEVVAQLRKNGFRVSIDTRSSKVNAKIRDAQLELIPYMFIVGPKEAEQTAVAV 676 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R+ G M L + I Sbjct: 677 RDRIDGDLGPMPLADAIAKLKQEADER 703 >gi|225574947|ref|ZP_03783557.1| hypothetical protein RUMHYD_03026 [Blautia hydrogenotrophica DSM 10507] gi|225037794|gb|EEG48040.1| hypothetical protein RUMHYD_03026 [Blautia hydrogenotrophica DSM 10507] Length = 667 Score = 203 bits (515), Expect = 6e-50, Method: Composition-based stats. Identities = 68/445 (15%), Positives = 151/445 (33%), Gaps = 36/445 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE-EQNRT 64 Y + + RD ++ L T + +G+ +P G L + I + E N Sbjct: 245 YLEQLEEAKKRDHNKLGREMELFTT-VDVIGQGLPLLMPKGVIILKELQRWIEDLEDNEW 303 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHI 122 G I P + +DL+ SG +D Y M +++ + P ++++ Sbjct: 304 GYIRTKTPLMAKSDLYKISGHWDHYKDGMFVLGDEEKDKEVYALRPMTCPFQYYVYKASQ 363 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR LP + + FR+E G+ R R+F + +A+ + + Sbjct: 364 HSYRELPLRYSETSTLFRNEDSGEMHGLTRVRQFTITEAHLITRPDQIDEEF-------- 415 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ + + D+++ + + + ++ Sbjct: 416 -----KKCVQLAKFVLTTLGLQDDVTYRLSKWDPNNTEKYIGDAQYWETSQNKMRELLNE 470 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + + A Y D+ + ++ K + I + Sbjct: 471 LELDFVEADGEAAFYGPKLDIQAKNVY-----GKEDTMITI------QLDFALAEQFHMY 519 Query: 302 FKGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +G+ + +G A + + ++P + P ++ ++ I + Sbjct: 520 YIDENGEKKMPFIIHRTSMGCYERTLAWLI---EKYAGLFPTWLCPEQVRVLPI---SEK 573 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 D ++ A+L G DD E+IG + + L P ++VG+K + KV ++ Sbjct: 574 YLDYANQVNAQLKANGIRSSVDDRSEKIGYKIRESRLQKVPYMLVVGAKEEQEEKVSVRS 633 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R G L+ I++ Sbjct: 634 RYLGDEGMKDLKSFIDHICEEIRTK 658 >gi|322379566|ref|ZP_08053903.1| prolyl-tRNA synthetase [Helicobacter suis HS1] gi|321147960|gb|EFX42523.1| prolyl-tRNA synthetase [Helicobacter suis HS1] Length = 576 Score = 203 bits (515), Expect = 6e-50, Method: Composition-based stats. Identities = 104/255 (40%), Positives = 146/255 (57%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S F P L+E P+DA + SH+ +++ G I Q GIYS+LPLGQK L + II+EE Sbjct: 1 MRYSTLFAPSLKEPPKDAVLKSHQFLIQAGFIKQIGSGIYSFLPLGQKVLSKIKNIIKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E + A LW +S R YG+E+L DR + + GPTHEEV ++ + Sbjct: 61 MDKHGAQECMFNFITPASLWEQSKRLHKYGQELLVFKDRKNYPFVLGPTHEEVAVEVVKG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQI KFRDE+RPRFG+MR+REF+MKD YSF ++ + + +N M Sbjct: 121 FVQSYKQLPLHLYQIHTKFRDEIRPRFGLMRAREFIMKDGYSFHVSTQDLEREFNAMEQV 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF RLGL ++A+SG IGG+ S EF+VLA+ GE + + Sbjct: 181 YSRIFTRLGLNFRAVQADSGAIGGNKSKEFVVLAECGEDSIIACTNCSYAANIEIARRAR 240 Query: 241 DIISLNSIVEQWTAP 255 N + Sbjct: 241 RCEPDNVPKASFAKF 255 Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 4/226 (1%) Query: 218 ETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN--K 275 + ++ S ++ V+ T D+ ++ D PE Sbjct: 353 PDALVIFDCDLEEA-NSLICGANEKEMHFVGVDLATFEGLNYQDIAAVRVQDLCPECQGN 411 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 + IEVGHIF G Y+ + A F +G+ + +MG YGIG R++ A++E D Sbjct: 412 LEQHKSIEVGHIFQLGNTYAKNLGANFLNTEGEATFFEMGCYGIGVSRLLPAILEQKSDS 471 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 KG +W APF++ L+ + D + +Y L + G DV DD + G++ Sbjct: 472 KGCVWSLESAPFEVVLVVANSKDTELIALAQTLYQELLEAGVDVLLDDRNLRFGAKMIDF 531 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 + +G +I+G K +E+ R ++ + ++I+ R Sbjct: 532 ERIGSSYALIIG-KEAKSGHLELIKREGLSKQIVERVQLIDILKAR 576 >gi|193788250|dbj|BAG53144.1| unnamed protein product [Homo sapiens] Length = 619 Score = 203 bits (515), Expect = 6e-50, Method: Composition-based stats. Identities = 73/445 (16%), Positives = 147/445 (33%), Gaps = 44/445 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 202 KMLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNALIEFIRSE 259 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + P + +F Sbjct: 260 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEL-FALKPMNCPGHCLMFDH 318 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 319 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 377 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E D Sbjct: 378 FLRTVYSVFGFSFKLN-LSTRPEKFLGDIE-----------------VWDQAEKQLENSL 419 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 420 NEFGEKWELNSGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 468 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 469 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 524 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ + D D G + + A L + ++VG K + Sbjct: 525 --TCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTI 582 Query: 417 EIKHRLTGIREDMSLEEVINYASHR 441 I+ R + + ++ E I Sbjct: 583 NIRTRDNKVHGERTISETIERLQQL 607 >gi|168070814|ref|XP_001786949.1| predicted protein [Physcomitrella patens subsp. patens] gi|162660100|gb|EDQ48237.1| predicted protein [Physcomitrella patens subsp. patens] Length = 375 Score = 203 bits (515), Expect = 6e-50, Method: Composition-based stats. Identities = 78/394 (19%), Positives = 138/394 (35%), Gaps = 40/394 (10%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +L L M + + G+ +LP G + RE Q + G Sbjct: 20 LHMLEEAKKRDHRKLGKELELF--MFSEEAPGMPFYLPKGMTVRTELEQFSRELQLQEGY 77 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + + LW +SG ++ Y M ++ +D P + IF++ + SYR Sbjct: 78 QEVRTPLMMNNRLWEQSGHWEHYKDNM-YFSEVDDATFALKPMNCPGHMLIFKNTLHSYR 136 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP + R E G+MR R F DA+ + + + +S + Sbjct: 137 ELPIRMMEFGQVHRHEFSGALNGMMRVRTFCQDDAHLYVMPEQIEDE--INQAISLIGRM 194 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + + + + P S E A+ V D Sbjct: 195 YDIFGFEYKIELSTRPEDSMGSEELWDQAERALQNVL-----------------DRRGVQ 237 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 I E A Y D H + D+L + + ++ F K+ T+ G Sbjct: 238 YRINEGDGAFYGPKIDFH---ILDALKRSWQCGTIQLD----FQMPEKFD----LTYIGE 286 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 D H + I + I + +P +AP ++ L+ + H D Sbjct: 287 DSLKHRPVVIHRAI--YGSIDRFIGILTEHYAGAFPLWLAPVQVKLLPVSDH---YADYA 341 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 ++ ++L G V D E++G + A + Sbjct: 342 LQVQSQLRAAGIRVETDLRSEKLGYKIREAQMEK 375 >gi|116513081|ref|YP_811988.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11] gi|123025108|sp|Q02VZ7|SYP_LACLS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116108735|gb|ABJ73875.1| Prolyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11] Length = 616 Score = 203 bits (515), Expect = 7e-50, Method: Composition-based stats. Identities = 109/282 (38%), Positives = 161/282 (57%), Gaps = 11/282 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH L++R G + Q S GIY++LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALLMRAGYVRQVSAGIYAYLPLANRVLEKLKNIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ P+L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE MT + R Sbjct: 61 FDEIGAVELLAPSLLTADLWRESGRYETYGEDLYKLKNRDSSDFILGPTHEETMTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI KFRDE RPR+G++R REFLMKD YS+ + +Y S Sbjct: 121 EITSYKKLPLNVYQIATKFRDEKRPRYGLLRGREFLMKDGYSYHADQDSLDETYLDYKKS 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTG---ETQVFCSKDFMD-------- 229 Y +IF R GL P+ A++G +GG S EFI + D E + SK+ Sbjct: 181 YEKIFERAGLNFKPIIADAGAMGGKDSQEFIAITDDRINLEKWLVLSKNITSIDEIPESV 240 Query: 230 FPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 E + ++IV YAA ++ + ++ Sbjct: 241 LSEIQEELGKWLVAGEDTIVYAEGGDYAANIEMATSQFEPNV 282 Score = 147 bits (372), Expect = 3e-33, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 14/188 (7%) Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 NE ARGIE+GHIF GT+Y+ M+A A+G+ + MG YGIG R Sbjct: 425 NEGEISPDGRGTLKFARGIEIGHIFKLGTRYTEAMNANILDANGRSIPMLMGCYGIGVSR 484 Query: 324 VVAAVIESSHD-------------GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 +++A++E I +P +APF I L+ + D+ + ++ Sbjct: 485 LLSAILEQFARIYVEKTPREEFKFSWSINFPKELAPFDIHLVPVNVKDEAAMELTSELEE 544 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +L G V DD E+ G +FA +DL+G P++V +G K ++ VE+K R TG +++ Sbjct: 545 KLRGKGYQVLVDDRNERAGVKFADSDLIGLPVRVTIGKK-AAEGIVEVKIRATGEVVEIN 603 Query: 431 LEEVINYA 438 +E++N Sbjct: 604 KDELVNTI 611 >gi|223938078|ref|ZP_03629976.1| threonyl-tRNA synthetase [bacterium Ellin514] gi|223893292|gb|EEF59755.1| threonyl-tRNA synthetase [bacterium Ellin514] Length = 618 Score = 203 bits (515), Expect = 7e-50, Method: Composition-based stats. Identities = 70/452 (15%), Positives = 139/452 (30%), Gaps = 39/452 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 YF + + RD ++ L G+ WLP G ++ + + +E + G Sbjct: 194 YFTMLEEAKKRDHRKIGQEMGLFAIDTEYVGPGLPLWLPKGTMIVEELENLAKETEFAAG 253 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK---------AMIYGPTHEEVMTD 116 + + P L ++ SG Y + M + +K + Sbjct: 254 YVRVKTPHLAKEKMYKTSGHLPYYAESMFPPMELKEKGGDSNEEAERYYLKAMNCPHHHR 313 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYN 175 IF + SYR+LP + +R E FG+MR R M DA+ + + + +N Sbjct: 314 IFAAEPHSYRDLPLRLAEYGTCYRYEQSGELFGLMRVRSLNMNDAHIYCTEEQFADE-FN 372 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 + YL+ F GL+ MR + + + Sbjct: 373 AVNEMYLKYFKIFGLEKYQMRFSTHDPKRLG------------DKFVNEPELWKKTEDMV 420 Query: 236 NTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS 295 V A Y DV +++ ++ ++ ++ FG Sbjct: 421 RNVLVKNNINFVEVPNEAAFYGPKIDV---QVWSAIGREFTIATNQVDFAVPAKFG---- 473 Query: 296 LPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 T++ D + + +G + + G +W +++ Sbjct: 474 ----LTYRDRDNTEKTPLCIHRAPLGTHERFIGFLIEHYAGNFPLWLAPDQVRVLTI--- 526 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 D+ + + I L D + I ++ A A+ +++G + + Sbjct: 527 -GDDEALVNYAKLIANELRANMVRCETDFRTDPIKAKIAEAEQTKVHTMLVIGPRDMEAG 585 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 V ++ G EVI R Sbjct: 586 NVSVRLHGKGSLGAKPKGEVIADILASIKERR 617 >gi|154482657|ref|ZP_02025105.1| hypothetical protein EUBVEN_00330 [Eubacterium ventriosum ATCC 27560] gi|149736433|gb|EDM52319.1| hypothetical protein EUBVEN_00330 [Eubacterium ventriosum ATCC 27560] Length = 667 Score = 203 bits (515), Expect = 7e-50, Method: Composition-based stats. Identities = 74/446 (16%), Positives = 158/446 (35%), Gaps = 39/446 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE-EQNRT 64 +L L++ RD ++ L T + +G+ +P GQ+ + + I + E N Sbjct: 243 YLEELEDAKNRDHNKLGREMELFTT-VDVIGQGLPLLMPKGQRMIQKLQRWIEDLEDNEW 301 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHI 122 G + P + +DL+ SG +D Y M +++ + P ++++ Sbjct: 302 GYVRTKTPLMAKSDLYKISGHWDHYKDGMFVLGDEEKDKEVFALRPMTCPFQYYVYKASQ 361 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + + FR+E G+ R R+F + + + + + + Sbjct: 362 KSYRDLPCRYGETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVRPDQMVEE-FKNCIALA 420 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 LGL+ + D + + + + + + + Sbjct: 421 QYCLQTLGLEEDVTY-------------HLSKWDPENREKYIGEPEVWNETEQDIRNVLN 467 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 +++ + + A Y D++ + ++ + + + F Sbjct: 468 ELNIPFVEDIGEAAFYGPKVDINAKNVY---GKEDTMITIQWDALLAEQFD--------M 516 Query: 301 TFKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + +G+ + IG A + + +P + P ++ ++ I Sbjct: 517 YYIDENGEKKRPYIIHRTSIGCYERTLAWLI---EKYAGKFPTWLCPEQVRVLPISDK-- 571 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + +K+ A L K G DV D E+IG + A L P ++VG + +D V ++ Sbjct: 572 -YVEYADKVAAELKKNGIDVTVDSRSEKIGYKIREARLDKLPYMLVVGQQEEADETVSVR 630 Query: 420 HRLTGIREDMSLEEVINYASHRFSNN 445 R G L+E I Sbjct: 631 SRFAGDEGVKPLDEFIEQICKEIRTK 656 >gi|302820128|ref|XP_002991732.1| hypothetical protein SELMODRAFT_134156 [Selaginella moellendorffii] gi|300140413|gb|EFJ07136.1| hypothetical protein SELMODRAFT_134156 [Selaginella moellendorffii] Length = 647 Score = 202 bits (514), Expect = 8e-50, Method: Composition-based stats. Identities = 66/412 (16%), Positives = 134/412 (32%), Gaps = 38/412 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + RD + L H+ S G +LP G + + IR E + G Sbjct: 266 YMTKYEEAKKRDHRLLGKNQQLF--FFHELSPGSAFFLPKGTIVYNKLLQFIRSEYRKRG 323 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW +SG Y + M + + + P + +F+ ++SY Sbjct: 324 FDEVVTPNIYNMKLWEQSGHAAHYKENMF-VFEIEKQEFGLKPMNCPGHCLLFQHRVRSY 382 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+EL G+ R R F DA+ F + + + Sbjct: 383 RELPLRIADFGVLHRNELSGALTGLTRVRRFSQDDAHIFCMESQVYDE-VKGCLDFLDYV 441 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++ + P D + + Sbjct: 442 YTIFGFTY-DLKLSTRPENF-----------------LGESALWDRAEGALADALNAHAK 483 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D+ ++ D+L + + ++ F ++ L SA Sbjct: 484 PWQMNEGDGAFYGPKIDI---QVSDALNRKFQCATIQLD----FQSPIRFKLSYSAE--D 534 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + V + +G++ + A++ + + +D Sbjct: 535 EAKIERPVIIHRAILGSVERMFAILL------EDNVGKWPFWLSPRQAIVLTISEKFKDY 588 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 E++ A+L G +V D ++ + A + + ++VG+ +V Sbjct: 589 AEEVRAKLHAAGFEVDVDVSDRKVDKKVREAQMAHYNYLLVVGAMEQEKGEV 640 >gi|322368472|ref|ZP_08043041.1| threonyl-tRNA synthetase [Haladaptatus paucihalophilus DX253] gi|320552488|gb|EFW94133.1| threonyl-tRNA synthetase [Haladaptatus paucihalophilus DX253] Length = 640 Score = 202 bits (514), Expect = 8e-50, Method: Composition-based stats. Identities = 79/443 (17%), Positives = 141/443 (31%), Gaps = 42/443 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNR 63 +Y + + RD +L L + I + G+ + P G+ L ++ E Sbjct: 230 QYLERMEEAEERDHRKLGKELDLFS--IDETTGPGLPLYHPHGKTILRELSDYAGELNRG 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L +LW +SG YD+Y +M L D ND+ P + IF H Sbjct: 288 AGYDEVETPHLFRTELWKKSGHYDNYVDDMF-LLDVNDEEYGLKPMNCPGHATIFDQHSW 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP +++ +R E R G+ R F + D + F + + ++ Sbjct: 347 SYRDLPIRYFENGKVYRKEQRGELSGLSRVWSFTIDDGHLFVRPDQIERE-IRQVMDLIF 405 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + L A T + S + + + + Sbjct: 406 EVIETFDLDVEVALA------------------TRPEKSVGSDELWEHAEEQLRSVLEST 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I A Y D E D+L ++ F ++ L Sbjct: 448 GIDYDIEAGDGAFYGPKIDFGFE---DALGRVWDGPTVQLD----FNMPERFDLTY---V 497 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + ++ V + G+ V+ DGK +W + + Sbjct: 498 TEENEEERPVMIHRALYGSYERFFMVLIEHFDGKFPLW------LSPEQVRVLPVSDDNL 551 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 ++ L V +D +G + A P +IVG + ++ RL Sbjct: 552 GYAHRVANELDD--FRVEVEDRSWTVGRKIQQAHDDRVPYMIIVGGDEEEAGTISVRDRL 609 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 +D+SLE + Sbjct: 610 EREEKDVSLEAFREHLEAERDEK 632 >gi|125625170|ref|YP_001033653.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363] gi|152112925|sp|A2RNT2|SYP_LACLM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|124493978|emb|CAL98976.1| ProS protein [Lactococcus lactis subsp. cremoris MG1363] gi|300071979|gb|ADJ61379.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000] Length = 616 Score = 202 bits (514), Expect = 8e-50, Method: Composition-based stats. Identities = 108/282 (38%), Positives = 161/282 (57%), Gaps = 11/282 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH L++R G + Q S GIY++LPL + L+ + I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALLMRAGYVRQVSAGIYAYLPLANRVLEKLKNIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+E+ P+L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE MT + R Sbjct: 61 FDEIGAVELLAPSLLTADLWRESGRYETYGEDLYKLKNRDSSDFILGPTHEETMTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI KFRDE RPR+G++R REFLMKD YS+ + +Y + Sbjct: 121 EITSYKKLPLNVYQIATKFRDEKRPRYGLLRGREFLMKDGYSYHADQDSLDETYLDYKKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTG---ETQVFCSKDFMD-------- 229 Y +IF R GL P+ A++G +GG S EFI + D E + SK+ Sbjct: 181 YEKIFERAGLNFKPIIADAGAMGGKDSQEFIAITDDRINLEKWLVLSKNITSIDEIPESV 240 Query: 230 FPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSL 271 E + ++IV YAA ++ + ++ Sbjct: 241 LSEIQEELGKWLVAGEDTIVYAEGGDYAANIEMATSQFEPNV 282 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 14/188 (7%) Query: 264 NEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMR 323 NE ARGIE+GHIF GT+Y+ M+A A+G+ + MG YGIG R Sbjct: 425 NEGEISPDGRGTLKFARGIEIGHIFKLGTRYTEAMNANILDANGRSIPMLMGCYGIGVSR 484 Query: 324 VVAAVIESSHD-------------GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 +++A++E I +P +APF I L+ + D+ + ++ Sbjct: 485 LLSAILEQFARIYVEKTPREEFKFSWSINFPKELAPFDIHLVPVNVKDEAAMELTSELEE 544 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +L G V DD E+ G +FA +DL+G P++V +G K ++ VE+K R TG +++ Sbjct: 545 KLRGKGYQVLVDDRNERAGVKFADSDLIGLPVRVTIGKK-AAEGIVEVKIRATGEVVEIN 603 Query: 431 LEEVINYA 438 +E++N Sbjct: 604 KDELVNTI 611 >gi|290579880|ref|YP_003484272.1| putative prolyl-tRNA synthetase [Streptococcus mutans NN2025] gi|254996779|dbj|BAH87380.1| putative prolyl-tRNA synthetase [Streptococcus mutans NN2025] Length = 616 Score = 202 bits (514), Expect = 8e-50, Method: Composition-based stats. Identities = 101/253 (39%), Positives = 150/253 (59%), Gaps = 3/253 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S +P L+E P DA++ SH LM+R G + Q S GIYS+LPL + ++ + I+REE Sbjct: 1 MKQSNMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYSYLPLAHRVIEKIKEIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T++ R Sbjct: 61 FDKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDQSDFILGPTHEETFTNLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y + Sbjct: 121 AVKSYKQLPLNLYQIQAKYRDEKRPRNGLLRTREFIMKDGYSFHADYDSLDATYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS-ENTDF 239 Y IF R+GL + + G +GG S EF+ + + +D I S E Sbjct: 181 YEAIFTRVGLDFKAIIGDGGAMGGKDSQEFMAVTP--DRTDLEHWLVLDKAIGSIEEIPA 238 Query: 240 DDIISLNSIVEQW 252 D + + + W Sbjct: 239 DVLKEIKQELSSW 251 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 104/204 (50%), Gaps = 16/204 (7%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 AA D+ ++ P+ K V RGIE+GHIF GT+YS M + +G+ + Sbjct: 414 FEAAYVDIREVCEGEASPDGKGVLKFARGIEIGHIFKLGTRYSESMGSNILDENGRSIPI 473 Query: 313 QMGSYGIGAMRVVAAVIES-------------SHDGKGIIWPDSVAPFKISLINIKAHDQ 359 MGSYGIG R+++AVIE G+ +P ++APF + LI + D+ Sbjct: 474 IMGSYGIGVSRILSAVIEQNARIFVNKTPKGAYRFSWGVNFPKTLAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 V + K+ L V D+ E+IGS+F+ +DL+G P++V VG K SD VE+K Sbjct: 534 VSQQLTAKVEESLVDAHYSVLTDNRNERIGSKFSDSDLIGLPIRVTVGKK-ASDGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFS 443 + TG +++ E ++ S Sbjct: 593 IKSTGDTIEVNAENLLETLSILID 616 >gi|73919796|sp|Q5UX65|SYT_HALMA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS Length = 642 Score = 202 bits (514), Expect = 8e-50, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 148/445 (33%), Gaps = 44/445 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNR 63 ++ + RD ++ L + I + G+ + P G+K L+ ++ + Sbjct: 230 EFLEQRRKAEERDHRKIGQEMDLFS--IDETTGPGLPLYEPNGKKILNELSDYVAGLNRD 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + +LW +SG Y++Y +M L D ND+ P + IF + Sbjct: 288 AGYDEVETPHVFRTELWKKSGHYENYVDDMF-LLDVNDEEYGLKPMNCPGHATIFEQNSW 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP +++ +R E R G+ R+ F + D + + P+ + L Sbjct: 347 SYRDLPVRYFEDGKVYRKEQRGELSGLSRTWAFTIDDGH-LFVRPDQIEEEVLATVDIIL 405 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 L A T + + + + ++ Sbjct: 406 DTLDTFNLDYTVQFA------------------TRPEKSVGGDEIWEKAESQLESVLEEQ 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + E A Y D E D+L + G ++ Sbjct: 448 DIDYVVEEGDGAFYGPKIDFAFE---DALGRHW--------DGPTVQLDFNMPERFDLSY 496 Query: 303 KGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G D ++H + G+ V+ + +P +AP +I L+ + + Sbjct: 497 TGEDNEEHRPVMIHRALYGSYERFFMVLT---EHYNGKFPPWLAPEQIRLLPVSDDN--- 550 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 CE+I L V +D +G + A P ++G + ++ R Sbjct: 551 ITYCEEIQDELDD--FRVTIEDRSWTVGKKIQQAHDDRVPYMCVIGDNEEEAGTISVRDR 608 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 +D+ + E ++ R Sbjct: 609 KEREEKDIDIAEFRDHLETEVEQQR 633 >gi|270002317|gb|EEZ98764.1| hypothetical protein TcasGA2_TC001328 [Tribolium castaneum] Length = 351 Score = 202 bits (514), Expect = 8e-50, Method: Composition-based stats. Identities = 132/361 (36%), Positives = 200/361 (55%), Gaps = 34/361 (9%) Query: 2 RRSKYFLPIL-----QENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNA 55 R S+ F P+ E R D S +LML G+I Q S G + +LPLG K+L+ + Sbjct: 8 RLSRLFQPVSVVPKNAEVKRHDITSKSQRLMLELGIIRQASPGCFHFLPLGVKSLEKLTR 67 Query: 56 IIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMT 115 ++ EE + G ++ PTL +A LW ++GR ++ E+ ++ DR+D++ I PTHEE + Sbjct: 68 LVDEEMKKIGGQKIIFPTLTNAKLWEKTGRLETVSSELFQIKDRHDQSYILSPTHEEAAS 127 Query: 116 DIFRSH-IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSY 174 ++ S SY++LP YQI K+RDE++PRFG+MR ++FLMKD YSFD E +KH+Y Sbjct: 128 NLLASLAPISYKHLPLKLYQITSKYRDEMKPRFGLMRGKQFLMKDMYSFDTDLETAKHTY 187 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPS 234 +++ SY RIF R+G+ + + SG +GG+LSHE+ AD GE ++ Sbjct: 188 DEICKSYDRIFRRIGIDFVKVVGCSGHMGGELSHEYHYKADVGEDKILTCNKCN------ 241 Query: 235 ENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY 294 Y+A ++V E+ + GIEVGH F G KY Sbjct: 242 ---------------------YSANTEVSGEEKCPNCGNTSVKIHLGIEVGHTFLLGEKY 280 Query: 295 SLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 S P++ATF GK +QMGSYG+G R++AAVIE + I WP ++P+ + ++ Sbjct: 281 SKPLNATFLNNHGKPDVLQMGSYGLGLSRILAAVIEVMSSEQEIRWPQILSPYSVIILPP 340 Query: 355 K 355 K Sbjct: 341 K 341 >gi|291059576|gb|ADD72311.1| prolyl-tRNA synthetase [Treponema pallidum subsp. pallidum str. Chicago] Length = 619 Score = 202 bits (514), Expect = 8e-50, Method: Composition-based stats. Identities = 92/237 (38%), Positives = 136/237 (57%), Gaps = 1/237 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S +F P L+ P DA IASH+L++R G + + + G++++LPLG + + AIIREE Sbjct: 1 MKMSAFFAPTLRSAPADATIASHQLLMRAGYVRKIANGLFAYLPLGLRVRHKIEAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 G +E + P + A+LW ESGR+ G E+LR +R D +++ PT EE T + R Sbjct: 61 LEAIGCLECTAPVVTPAELWKESGRWYRMGAELLRAKNRLDHELLFSPTAEESFTALVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++ P + YQI K+RDE+RPR+G+MR+REF M DAYSF +Y K + Sbjct: 121 DCTSYKHFPLSLYQINAKYRDEIRPRYGLMRAREFTMADAYSFHTDCACLARTYEKFAHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 Y IF R+GL I + A G +GG S EF+V + G+ + + E Sbjct: 181 YRAIFRRIGLSVIAVHAHLGAMGGQESEEFMVESAVGDNTLLLCPHCT-YAANCEKA 236 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 62/188 (32%), Positives = 95/188 (50%), Gaps = 5/188 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 A +D+ + D +G E+GH+F G KY+ M TF G + MG Sbjct: 427 AVADLMLVRAGDRCIHCGAPLYEKKGNELGHLFKLGDKYTRSMHLTFTDEQGVRQFPLMG 486 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R +A+V+E+ HD +GI WP +++P+ + LI I H Q A E +Y +L Sbjct: 487 CYGIGLDRTLASVVENHHDTRGISWPLAISPYAVVLIPI-PHTQAPYAAAEALYVQLRTR 545 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V +DD E+ G +FA ADL+G PL+V++ +K + VE R + EE Sbjct: 546 GVEVLFDDRAERPGVKFADADLIGIPLRVVLSAKTLPR--VECTTRCGAHTYFFTQEEAS 603 Query: 436 NYASHRFS 443 + + Sbjct: 604 EHIARLLE 611 >gi|157165397|ref|YP_001466693.1| prolyl-tRNA synthetase [Campylobacter concisus 13826] gi|171855061|sp|A7ZD35|SYP_CAMC1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|112800481|gb|EAT97825.1| prolyl-tRNA synthetase [Campylobacter concisus 13826] Length = 566 Score = 202 bits (514), Expect = 9e-50, Method: Composition-based stats. Identities = 101/274 (36%), Positives = 151/274 (55%), Gaps = 1/274 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK++ P +E P+DA + SH+ ++R G + Q G+Y++LPLG+ D ++ +++EE Sbjct: 1 MKFSKFYAPTTKEAPKDASLPSHQFLIRGGFVEQIGSGLYNYLPLGKIMHDKISRVVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GA+E+S + S +LW +SGRY+ +GKE+LR DR D + PT+EE + R Sbjct: 61 MNEAGALEVSFSVVTSGELWKQSGRYNVFGKELLRFKDRKDNDFVISPTNEEAAVALVRG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQI KFRDE RPRFG++R REF MKD YSF + E K ++ M + Sbjct: 121 KVTSYKQLPLNLYQINTKFRDEARPRFGLLRGREFTMKDGYSFHSSKEDLKREFDLMEAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF RLGL + A+SG IGG S EF+VLA GE + C + Sbjct: 181 YSKIFTRLGLNFRAVEADSGAIGGSGSKEFMVLASNGEDDILCCEACRYAANVEAARRKP 240 Query: 241 DIISLNSIVEQWTAPYAATS-DVHNEKLFDSLPE 273 + + + + + F + E Sbjct: 241 RVSEAEAPEADAAKFLTPNAKTIKDVAEFFKVSE 274 Score = 154 bits (388), Expect = 4e-35, Method: Composition-based stats. Identities = 64/184 (34%), Positives = 90/184 (48%), Gaps = 3/184 (1%) Query: 261 DVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ K D P ++GIEVGHIF G KYS M+AT+ +GK MG YG Sbjct: 384 DLVKVKEGDKCPVCGGNLKLSKGIEVGHIFQLGDKYSAAMNATYLDENGKVKPFLMGCYG 443 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R++A +IE+SHD KG IW APF + +I D+ ++Y L K G Sbjct: 444 IGISRLIAVMIEASHDEKGCIWKKECAPFDVEIIISNLKDEAGVKFAFELYESLKKAGVS 503 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD E+ G + +L+GFP ++VG K ++ KVE R +E + + Sbjct: 504 VIIDDRNERFGVKMNDFELIGFPYALLVG-KEFANGKVEFITRDGLSKETIEANDAFRKI 562 Query: 439 SHRF 442 Sbjct: 563 KESL 566 >gi|302816171|ref|XP_002989765.1| hypothetical protein SELMODRAFT_130418 [Selaginella moellendorffii] gi|300142542|gb|EFJ09242.1| hypothetical protein SELMODRAFT_130418 [Selaginella moellendorffii] Length = 647 Score = 202 bits (514), Expect = 9e-50, Method: Composition-based stats. Identities = 69/412 (16%), Positives = 140/412 (33%), Gaps = 38/412 (9%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + RD + L H+ S G +LP G + + IR E + G Sbjct: 266 YMTKYEEAKKRDHRLLGKNQQLF--FFHELSPGSAFFLPKGTIVYNKLLQFIRSEYRKRG 323 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + + LW +SG Y + M + + + P + +F+ ++SY Sbjct: 324 FDEVVTPNIYNMKLWEQSGHAAHYKENMF-VFEIEKQEFGLKPMNCPGHCLLFQHRVRSY 382 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP + R+EL G+ R R F DA+ F + + + Sbjct: 383 RELPLRIADFGVLHRNELSGALTGLTRVRRFSQDDAHIFCMESQVYDE-VKGCLDFLDYV 441 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + G ++ + P D + + Sbjct: 442 YTIFGFTY-DLKLSTRPENF-----------------LGESSLWDRAEGALADALNAHAK 483 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + E A Y D+ ++ D+L + + ++ F ++ L SA Sbjct: 484 PWQMNEGDGAFYGPKIDI---QVSDALNRKFQCATIQLD----FQSPIRFKLSYSAE--D 534 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + V + +G++ + A++ + GK W +++ + +D Sbjct: 535 EAKIERPVIIHRAILGSIERMFAILLEDNAGKWPFWLSPRQAIVLTI------SEKFKDY 588 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 E++ A+L G +V D ++ + A + + ++VG+ +V Sbjct: 589 AEEVRAKLHAAGFEVDVDVSDRKVDKKVREAQMAHYNYLLVVGAMEQEKGEV 640 >gi|313141032|ref|ZP_07803225.1| prolyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171] gi|313133542|gb|EFR51159.1| prolyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171] Length = 596 Score = 202 bits (514), Expect = 9e-50, Method: Composition-based stats. Identities = 98/233 (42%), Positives = 142/233 (60%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 FL L+E+P DA+ S KL+LR G + + + GI++WLPLG K L+ + AI+REE + G Sbjct: 1 MFLRTLREDPADADTDSAKLLLRAGYVRKAAPGIWTWLPLGLKVLNKIEAIVREEIDGIG 60 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 A E+ P L + + + R++ YG+ + RL DR++ + PTHEE+ T + + SY Sbjct: 61 AQEVHFPALLPREPYEATHRWEEYGENLFRLKDRHEADYLLAPTHEEMFTLLVKDMYSSY 120 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 ++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF + EG K +Y +Y RIF Sbjct: 121 KDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTIDEEGMKKAYYDERGAYERIF 180 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 RL LK +P+ A SGP+GG S EF+ GE + + + + T Sbjct: 181 QRLDLKYVPVFAMSGPMGGSASEEFLAPMAIGEDTFALAPSGKAWNVEALTTP 233 Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 58/234 (24%), Positives = 94/234 (40%), Gaps = 4/234 (1%) Query: 214 ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 A E F + + V T + + D P+ Sbjct: 360 AGVAEPVRFFIDAHVAEGTEWIIGGDEAGKHRFHAVYGRDFKADGTVEAVEVRHGDMSPD 419 Query: 274 N--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 RG+E+G +F G KYS + +GK V MG YGIG RV+A + E+ Sbjct: 420 GSGPLSFERGVEIGQVFQLGLKYSKALDLKVLDQNGKTVPVWMGCYGIGVSRVLACIAET 479 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGS 390 HD +G+ W +V + D DA EK+ A L + G +V +DD + G Sbjct: 480 HHDERGLAW-PAVIAPAQVHVVATGKDAAAFDAAEKLVAELEERGIEVIYDDRKKVSPGV 538 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +F A+L+G PL + G V++ +EI++R + + + + + R Sbjct: 539 KFKDAELIGVPLIAVAGRDTVNNGTIEIRNRDSSDSVAVPVADAAQTLASRLDT 592 >gi|146420108|ref|XP_001486012.1| hypothetical protein PGUG_01683 [Meyerozyma guilliermondii ATCC 6260] gi|146389427|gb|EDK37585.1| hypothetical protein PGUG_01683 [Meyerozyma guilliermondii ATCC 6260] Length = 719 Score = 202 bits (514), Expect = 9e-50, Method: Composition-based stats. Identities = 82/446 (18%), Positives = 155/446 (34%), Gaps = 43/446 (9%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E RD + L ++ S G WLP G + + + ++R E + Sbjct: 304 LKFLKEAADRDHRKIGREQELF--FFNEMSPGSAFWLPHGTRIYNRLVDLMRSEYIQRDF 361 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + ++ LW SG + +Y + M D + P + IF+S +SYR Sbjct: 362 QEVITPNMYNSKLWETSGHWGNYKENMFTF-DVEKDSFGLKPMNCPGHCLIFKSRERSYR 420 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP+ + R+E G+ R R F DA+ F T E + F +++ Sbjct: 421 ELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFC-TEEQIEDEIAGCFDFLQKVY 479 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G + + P E A+ + N + Sbjct: 480 GIFGFEFKM-ELSTRPEKYVGELETWNNAEAKL-------------ESALNKFLGE--GK 523 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + A Y D+ + D+L + + + ++ F ++ L A Sbjct: 524 WELNPGDGAFYGPKIDIM---ISDALKRSFQCATIQLD----FQLPNRFELEFKAE---T 573 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 V + +G++ +AA++ + WP ++P +I ++ + D Sbjct: 574 SSHARPVMIHRAILGSVERMAAILT---EHFKGRWPFWLSPRQILVVPVGVK---YNDYA 627 Query: 366 EKIYARL-SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL-- 422 + I +L D G + + LL + IVG + ++ V I++R Sbjct: 628 QSIQQKLSKDHAFYADVDLSGNTLQKKVRSGQLLQYNFIFIVGEQEQAEQSVNIRNRDIQ 687 Query: 423 --TGIREDMSLEEVINYASHRFSNNR 446 G E + +V+ R Sbjct: 688 SEQGKNETVKFGDVVKQLKSLRDELR 713 >gi|312871363|ref|ZP_07731459.1| proline--tRNA ligase [Lactobacillus iners LEAF 3008A-a] gi|312872484|ref|ZP_07732553.1| proline--tRNA ligase [Lactobacillus iners LEAF 2062A-h1] gi|312873339|ref|ZP_07733392.1| proline--tRNA ligase [Lactobacillus iners LEAF 2052A-d] gi|311091129|gb|EFQ49520.1| proline--tRNA ligase [Lactobacillus iners LEAF 2052A-d] gi|311092066|gb|EFQ50441.1| proline--tRNA ligase [Lactobacillus iners LEAF 2062A-h1] gi|311093115|gb|EFQ51463.1| proline--tRNA ligase [Lactobacillus iners LEAF 3008A-a] Length = 566 Score = 202 bits (514), Expect = 1e-49, Method: Composition-based stats. Identities = 109/273 (39%), Positives = 143/273 (52%), Gaps = 3/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DA SH+LMLR G I Q + G+Y++LPL L II EE Sbjct: 1 MRQSILFIPTLKEVPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLAYLVLRKAEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 EM +P A LW ESGR YG EM RL DR+ + + GPTHEE T+I Sbjct: 61 MENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKDRHGRESLLGPTHEETFTEIIGK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NIKSYKQMPIALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDKQFDDQKHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R G++ P+ A SG +GG S EF A GE + ++ D Sbjct: 181 YKKIFKRCGVEVYPVIANSGTMGGKNSTEFQAPASIGEDVIATNETGTYSANLEMARSID 240 Query: 241 DI---ISLNSIVEQWTAPYAATSDVHNEKLFDS 270 +E+ P AT + +E L Sbjct: 241 TFSPEKEELKPLEKVATPDCATIEQLSEFLHVP 273 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 94/193 (48%), Gaps = 2/193 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A N D + IEVGHIF GT Y+ M+A F +GK Sbjct: 376 DFKVNEFADLRTANAGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTNSMNAKFLDQNGKTQ 435 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + MGSYGIG R+++A++E I WP VAPF+I +I + + +K+ Sbjct: 436 PIIMGSYGIGVTRMLSAIVEQHSTDNSIFWPKEVAPFEIHIIQMNMKNDEQTVVSKKLEE 495 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 S DV +DD E+ G +F ADL+G P+++IVG + VS+ VE+K +MS Sbjct: 496 IFSDK-YDVLYDDRNERPGVKFNDADLIGAPIRIIVGRR-VSEQIVEVKKSTEQESVEMS 553 Query: 431 LEEVINYASHRFS 443 L+ + Y S Sbjct: 554 LDSLTEYISKELR 566 >gi|310796349|gb|EFQ31810.1| threonyl-tRNA synthetase [Glomerella graminicola M1.001] Length = 791 Score = 202 bits (514), Expect = 1e-49, Method: Composition-based stats. Identities = 82/481 (17%), Positives = 154/481 (32%), Gaps = 71/481 (14%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD L H+ S G WLP G + + + A I+E+ + E+ Sbjct: 318 LEEAAARDHRKLGQDQQLF--FFHELSPGSAMWLPHGARIYNTLLAYIKEQYFKRDYHEV 375 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P + +A+LW SG +D Y +M + D + + P + +F K+Y LP Sbjct: 376 ISPNMYNAELWKISGHWDHYKDDMF-VIDVDKEKFGLKPMNCPGHCLMFAHTPKAYHQLP 434 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 + + R+E G+ R R F DA+ F + + +F ++ L Sbjct: 435 WRVADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCREDQIKSE-ISNLFDFLREMYGLL 493 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 G +R + P E A+ Q + + ++ Sbjct: 494 GFTFK-LRLSTRPEKYLGELETWNRAEDMLKQAL------------DEFALTEAGVPWTL 540 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS------------- 295 E A Y D+ K+ D L + + ++ FG +Y Sbjct: 541 NEGDGAFYGPKIDI---KIMDVLNREWQCATIQLDFQLPQNFGLEYVSADAPAKSKEEAP 597 Query: 296 ---LPMSATFKGAD------------------------GKDHYVQMGSYGIGAMRVVAAV 328 K G V + G++ + Sbjct: 598 AAPKAPEVKVKDPQAIIDSAAGVGEEKEKKRTIKPLTNGCQRPVIIHRAMAGSIERFTGI 657 Query: 329 IESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQI 388 + + WP ++P +I +I + + E++ A K G V D G + Sbjct: 658 LI---EHFAGKWPFWLSPRQIMVIPVGKG---FVEYAEEVQATFKKQGMWVDVDLSGNTL 711 Query: 389 GSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED----MSLEEVINYASHRFSN 444 + A L + +VG + + +V I++R +D + + E + Sbjct: 712 PKKIRSAQLSQYNFIFVVGDEEMKHKQVNIRYRDDTSSQDRGKPVDVIEAVERLKKLREE 771 Query: 445 N 445 Sbjct: 772 R 772 >gi|312869026|ref|ZP_07729203.1| proline--tRNA ligase [Lactobacillus oris PB013-T2-3] gi|311095452|gb|EFQ53719.1| proline--tRNA ligase [Lactobacillus oris PB013-T2-3] Length = 578 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 105/303 (34%), Positives = 156/303 (51%), Gaps = 11/303 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P +ENP DAE SH +M R G I+Q S G++++LPL + + ++ I+ EE Sbjct: 1 MKQSKLLIPTKKENPSDAEALSHIMMERAGYIYQISAGVWAYLPLAYRVIRKIHQIMHEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA +M P++ ADLW ++GRY++YG + + D ND+ I GPT EE MT+I R Sbjct: 61 MEKAGAFQMETPSMLPADLWKQTGRYEAYGDTLYKFKDHNDREYILGPTDEEAMTEILRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQI KFR+E RPR+GV+R +EF M DAYSF EG +Y + Sbjct: 121 SVKSYKKLPLVVYQITDKFRNEPRPRYGVLRGKEFSMLDAYSFAADEEGLDEAYQAQAQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + A+SG IGGD S EF A+ GE + + + + FD Sbjct: 181 YRNIFDRAGLSYKVILADSGTIGGDNSQEFSAPAEIGEDVIVYTDGGYAANLEKATSKFD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 + E V ++ G++ G + + Sbjct: 241 AVQQTAEPKELEKKATPGAHTVDEA-----------CASLGVDQGQMIKSMLYMAKMGED 289 Query: 301 TFK 303 ++ Sbjct: 290 DYQ 292 Score = 159 bits (402), Expect = 9e-37, Method: Composition-based stats. Identities = 64/179 (35%), Positives = 99/179 (55%), Gaps = 2/179 (1%) Query: 261 DVHNEKLFDSLPEN-KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 D N + + P+ GIE+GHIF GT YS + A +G+ + MG YGI Sbjct: 387 DFRNVQEGEIAPDGYPIKFTNGIEIGHIFKLGTGYSKKLGAQVLDKNGRLVDMIMGCYGI 446 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G R+++AV E + D G++WPDS+APF + +I + A ++ +L+ G +V Sbjct: 447 GVTRMLSAVAEQNADENGLVWPDSIAPFDVHVIPVNAKKDEQMTMANELEQQLTAAGYEV 506 Query: 380 FWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 DD E+ G +FA +DL+G PL+V +G K +D VE+K R TG ++ EE++N Sbjct: 507 LVDDRKERAGVKFADSDLIGIPLRVTIGKK-AADGIVEVKIRKTGETLEVKQEELVNTV 564 >gi|121708695|ref|XP_001272218.1| threonyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1] gi|119400366|gb|EAW10792.1| threonyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1] Length = 743 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 76/459 (16%), Positives = 143/459 (31%), Gaps = 41/459 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S++ + + R+ L + S G LP G K + + A++R E Sbjct: 306 MSEHLKFLEEAEKRNHLRIGKDQELF--FFDEVSPGCPFLLPNGTKIFNALQALLRSEYR 363 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G E+ P + +W SG + Y +M +L D + P + +F Sbjct: 364 KRGYQEVQTPNMYDVGVWKTSGHWAHYKDDMFKL-DVEKREWALKPMNCPGHFVLFGHRE 422 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR LP + R+E G+ R R+F D + F + S +F Sbjct: 423 RSYRELPLRIADFGVLHRNEASGALSGLTRVRKFQQDDTHIFCTQDQISSE-IEGLFDFL 481 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I+ G ++ + P + D ++ + Sbjct: 482 QSIYGLFGFTF-KLKLSTRP-----------------EKYLGDLDTWNYAEEQLKSAMTK 523 Query: 242 IISLNSIV-EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTKYSLPM 298 + + E A Y D+ + D+L + + ++ F + Sbjct: 524 FKGADWTIDEGDGAFYGPKIDI---TIADALKREFQCATIQLDYQAPINFKLEYMTNEKG 580 Query: 299 SATFKGADGKDHYVQMGSYGIGAMRV---VAAVIESSHDGKGIIWPDSVAPFKISLIN-- 353 A K+ + G G R A+I S GI+ + + Sbjct: 581 QA-VMEESKKEGETKSNEPGPGRARPVVIHRAIIGSFERFLGILIEHFGGKWPFWISPRQ 639 Query: 354 --IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 I D E++ L +V D G + + L + +VG++ Sbjct: 640 ILIVPVMPAVNDYVEELQQILRGDKLNVDIDISGNTMQKKIRTGQLAQYNFIFVVGAQEK 699 Query: 412 SDSKVEIKHRLTGIRED----MSLEEVINYASHRFSNNR 446 V I++R ++ + LEE + Sbjct: 700 ESRSVNIRNRDDPATQNKGVMVPLEEAREKLRILRKERK 738 >gi|118618602|ref|YP_906934.1| threonyl-tRNA synthetase [Mycobacterium ulcerans Agy99] gi|166225468|sp|A0PSZ4|SYT_MYCUA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|118570712|gb|ABL05463.1| threonyl-tRNA synthetase ThrS [Mycobacterium ulcerans Agy99] Length = 691 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 66/450 (14%), Positives = 129/450 (28%), Gaps = 49/450 (10%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 I + RD +L L + + G+ + P G + R + G + Sbjct: 261 IEEAQRRDHRKLGVELDLFS-FPDEIGSGLAVFHPKGGIVRRELEDYSRRKHTEAGYQFV 319 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDI 117 + P + A L+ SG D Y M + + P + + I Sbjct: 320 NSPHITKAQLFHTSGHLDWYADGMFPPMQIDAEYNTDGTVRKPGQDYYLKPMNCPMHCLI 379 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 FR+ +SYR LP ++ +R E G+ R R M DA+ F + Sbjct: 380 FRARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDAHIFCTREQMRDEL-RS 438 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + L + GL + + + S + + Sbjct: 439 LLRFVLDLLSDYGLTDFYLELST----------------KDPDKFVGSDEVWEEATNVLA 482 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + A Y + ++ D+L ++S ++ F F ++ Sbjct: 483 EVGAESSLELVPDPGGAAFYGPKI---SVQVKDALGRTWQMSTIQLD----FNFPERF-- 533 Query: 297 PMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 + ADG + G++ ++ + G W V I + Sbjct: 534 --GLEYTAADGTRQRPVMIHRALFGSIERFFGILTEHYAGAFPAWLAPVQAVGIPVA--- 588 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 ++ A+L G V D +++ + P ++ G + V Sbjct: 589 ---DEHIAYLGQVAAQLKSHGVRVEVDTSDDRMAKKIVHHTNQKVPFMLLAGDRDVQADA 645 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + + E + S Sbjct: 646 VSFRFGDRTQINGVPREAAVAAIVDWISRR 675 >gi|114600744|ref|XP_001153847.1| PREDICTED: threonyl-tRNA synthetase isoform 7 [Pan troglodytes] Length = 715 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 71/443 (16%), Positives = 143/443 (32%), Gaps = 48/443 (10%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 306 KMLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGAYIYNALIEFIRSE 363 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + P + +F Sbjct: 364 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEL-FALKPMNCPGHCLMFDH 422 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 423 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 481 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E D Sbjct: 482 FLRTVYSVFGFSFKLN-LSTRPEKFLGDIE-----------------VWDQAEKQLENSL 523 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F +++L Sbjct: 524 NEFGEKWELNSGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRFNLT-- 574 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 575 --------YKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP--- 620 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C + +K+ + D D G + + A L + ++VG K V I Sbjct: 621 TCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNI 680 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + R + + ++ E I Sbjct: 681 RTRDNKVHGERTISETIERLQQL 703 >gi|315612430|ref|ZP_07887343.1| proline--tRNA ligase [Streptococcus sanguinis ATCC 49296] gi|315315411|gb|EFU63450.1| proline--tRNA ligase [Streptococcus sanguinis ATCC 49296] Length = 617 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 109/279 (39%), Positives = 155/279 (55%), Gaps = 4/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 + L +V +T + L + E K Sbjct: 241 QEEIKAELLKWMVSGEDTIAYSTESSYAANLEMATNEYK 279 Score = 142 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E G+ +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGVNFPKELAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + ++ + + Sbjct: 593 IKATGDTIEVHADNLLETL--EILSKK 617 >gi|227549145|ref|ZP_03979194.1| threonyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291] gi|227078786|gb|EEI16749.1| threonyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291] Length = 884 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 62/453 (13%), Positives = 137/453 (30%), Gaps = 50/453 (11%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L +L+E RD +++ L + + G+ + P G + R G Sbjct: 254 LHMLREAEKRDHRRLGNEMDLFS-FPDELGSGLPVFHPDGGIIRLAMEDHSRRRHIEAGY 312 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND------------KAMIYGPTHEEVM 114 ++ P + L+ +SG D Y M + + P + + Sbjct: 313 SFVNTPHVTKGSLFSKSGHLDWYADGMFPPMKLDGEIDDDGNVVKQPQDYYVKPMNCPMH 372 Query: 115 TDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHS 173 IF S +SYR LP ++ +R E G+ R+R F DA+ + T + + Sbjct: 373 NLIFDSRGRSYRELPLRLFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYC-TEDQLEAE 431 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 + + + GL + + + + Sbjct: 432 LTSVLEFIISLLKDYGLNDFYLELST----------------KDPQKYIGDDEIWQRSTD 475 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 + + A Y + + D++ ++S ++ F + Sbjct: 476 ILQSVAEKSGLELVPDPAGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FNLPER 528 Query: 294 YSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 + T+ DG + G++ V+ + +P +AP ++ I Sbjct: 529 FD----LTYTAPDGTKKRPVMIHRALFGSIERFFGVLL---EHYAGAFPAWLAPHQVVGI 581 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 + D + +L + G D +++ + P ++ G++ V Sbjct: 582 PVADDFAGHLD---SVTQKLRERGIRAEVDHSDDRMQKKIRNHTTSKVPFMLLAGARDVE 638 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V + + + E ++ S Sbjct: 639 ADAVSFRFLDGTQVNGVPVAEAVDIIDAWVSER 671 >gi|159901383|ref|YP_001547630.1| prolyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779] gi|159894422|gb|ABX07502.1| prolyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779] Length = 570 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 102/227 (44%), Positives = 141/227 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK +E P DAE+ SH L++R G + Q S GIYS LPL ++ ++ IIREE Sbjct: 1 MRMSKLATSTTKEAPNDAELISHSLLVRAGYVKQQSAGIYSLLPLCVRSTQKISQIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + E+ +P + SADLW E+GRY+ +E+LR DRN+K M+ THEEV+TDI R Sbjct: 61 MDAIDGQELLMPVVTSADLWRETGRYEGVTEELLRFKDRNNKDMVLNMTHEEVVTDIMRR 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSYR +P YQIQ K+RDE RPR G++R REF MKDAYSF T E Y ++ + Sbjct: 121 YIKSYRQMPVMVYQIQTKYRDEARPRGGIIRLREFTMKDAYSFHATIEDLDQYYEQVLNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 Y RI+ R GL ++++ G +GG ++HEF+ + GE + Sbjct: 181 YKRIYQRCGLPVEVVQSDPGMMGGKIAHEFMAVTPAGEDTLILCPSC 227 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 98/187 (52%), Gaps = 3/187 (1%) Query: 255 PYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 D+ + AR IEVG+IF GTKYS M F G+ Sbjct: 372 FTGEVVDLTDVLEGQPCSRCGAPLTIARAIEVGNIFKLGTKYSAAMKCVFANEKGEMQPA 431 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK-AHDQVCRDACEKIYAR 371 MG YGIG R++A++IE +D +G++ P +VAP+++ ++ + + +++Y+ Sbjct: 432 IMGCYGIGVQRILASLIEKFNDARGMMLPITVAPYQVHVVGTDYQSNAETKSVADQLYSD 491 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L G V DD G++F ADL+G P+QVI+GS+ + + + E+K R TG ++L Sbjct: 492 LQAQGVTVLLDDRDVNAGNKFGDADLIGNPIQVIIGSRGLKNGQAEVKIRSTGETTMVAL 551 Query: 432 EEVINYA 438 +++++ Sbjct: 552 ADLLSHV 558 >gi|311246798|ref|XP_003122346.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like [Sus scrofa] Length = 801 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 70/432 (16%), Positives = 141/432 (32%), Gaps = 42/432 (9%) Query: 9 PILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 + +E RD + L H S G +LP G + + IREE ++ Sbjct: 391 KLQEEAKTRDHRKIGKEQELF--FFHDLSPGSCFFLPRGAFIYNALMDFIREEYHQRSFT 448 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 E+ P + S+ LW SG + Y + M D + P + +F +S+R Sbjct: 449 EVLSPNMYSSKLWEASGHWQHYRENMFTF-DVDKDTFALKPMNCPGHCLMFAHRPRSWRE 507 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 +P F + R+EL + +D T E + ++ Sbjct: 508 MPIRFADFGVLHRNELSETLSSLTHVRRFQQDDAHIFCTVEQIEEEIKGCLKFLQSVYST 567 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 G F + T D + Sbjct: 568 FGFS------------------FQLNLSTRPEDFLGEVAIWDEAEKQLQNSLVEFGKPWK 609 Query: 248 IVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADG 307 + A Y D+ K+ D++ + + ++ F ++ + T+ +G Sbjct: 610 MKPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRF----NLTYVSKEG 658 Query: 308 KD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 D + V + +G++ + A++ +++GK W I + C Sbjct: 659 DDKKNPVIIHRAILGSVERMIAILSENYEGKWPFWLSPRQVIVIPVGP------ACEKYA 712 Query: 366 EKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++ + G D D + + A L + ++VG K +++ V ++ R Sbjct: 713 LQVSNEFLEEGFMADVDLDHSCTLNKKIQNAQLAQYNFILVVGEKEKANNAVSVQTRDNK 772 Query: 425 IREDMSLEEVIN 436 I ++S+ I+ Sbjct: 773 IHGEISVTSAID 784 >gi|182414299|ref|YP_001819365.1| threonyl-tRNA synthetase [Opitutus terrae PB90-1] gi|177841513|gb|ACB75765.1| threonyl-tRNA synthetase [Opitutus terrae PB90-1] Length = 637 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 78/497 (15%), Positives = 144/497 (28%), Gaps = 88/497 (17%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQ 61 ++Y Q RD L L I + +G+ W P G + I EE Sbjct: 167 LAQYLERQEQAKARDHRKLGKDLKLF--HIDEDVGQGLVLWTPNGAVIRQELQNFISEEL 224 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEML--------------------------- 94 + G ++ P + +L+ SG + Y Sbjct: 225 RKQGYQQVFTPHIGKLELYKTSGHFPYYKDSQFSPIFETDSLAKAIGENCSCAEAFARLE 284 Query: 95 ------------------------RLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 R D+ + P + IF S SYR+LP Sbjct: 285 AVSANLAAQINARTGKESIAPDRVRPDDQLLSGFMLKPMNCPHHIKIFASQPHSYRDLPV 344 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + +R E G+ R R F DA+ F + + I LG Sbjct: 345 RLAEFGTVYRWEQSGELNGMTRVRGFTQDDAHLFCTEEQVAAE-VLGCLSLVKIILSTLG 403 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + +R + L D + D + + + Sbjct: 404 MADYRVR--------------VGLRDPDSNKYTGDAANWDKAENACREAAKTLGVPFTEE 449 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D + D + ++ ++ F ++ GAD + Sbjct: 450 PGEAAFYGPKIDF---VIKDVIGREWQLGTVQVDYNLPVRFD--------LSYIGADNQP 498 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 H + G+M V+ + +P +AP ++ L+ I D + Sbjct: 499 HRPVMIHRAPFGSMERFCGVLI---EHFAGDFPAWLAPEQVRLVPISDK---VADYARAL 552 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 RL D+ +++G++ A++ P +++G K + V ++ R G Sbjct: 553 LGRLKAENFRATLDEHSDKLGAKIRRAEIDKVPYTLVIGQKEAEANSVSVRSRARGDEGV 612 Query: 429 MSLEEVINYASHRFSNN 445 M+ + I + Sbjct: 613 MTADAYIAKLKTEIATR 629 >gi|33286920|gb|AAH55371.1| Threonyl-tRNA synthetase [Mus musculus] Length = 722 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 74/449 (16%), Positives = 151/449 (33%), Gaps = 44/449 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 305 KLLKEWEKFQEEAKNRDYRKTGRDQELY--FFHELSPGSCFFLPKGAYIYNTLMEFIRSE 362 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + + P + +F Sbjct: 363 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSF-EVEKEQFALKPMNCPGHCLMFDH 421 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP + R+EL G+ R R F DA+ F + Sbjct: 422 RPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 480 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E A+ Sbjct: 481 FLRTVYSVFGFSFKLN-LSTRPEKFLGDIEIWNQAEK-----------------QLENSL 522 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 523 NEFGEKWELNPGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 571 Query: 300 ATFKGADGKD--HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 T+ DG D V + +G++ + A++ + G WP ++P ++ ++ + Sbjct: 572 LTYVSHDGDDKKRPVIVHRAILGSVERMIAILT---ENYGGKWPFWLSPRQVMVVPVGP- 627 Query: 358 DQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 C + +K+ + D D G + + A L + ++VG K + V Sbjct: 628 --TCDEYAQKVRQQFHDAKFMADTDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTV 685 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 I+ R + + ++EE + Sbjct: 686 NIRTRDNKVHGERTVEETVRRLQQLKQTR 714 >gi|325911837|ref|ZP_08174241.1| proline--tRNA ligase [Lactobacillus iners UPII 143-D] gi|325476343|gb|EGC79505.1| proline--tRNA ligase [Lactobacillus iners UPII 143-D] Length = 566 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 109/273 (39%), Positives = 143/273 (52%), Gaps = 3/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DA SH+LMLR G I Q + G+Y++LPL L II EE Sbjct: 1 MRQSILFIPTLKEVPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLAYLVLRKAEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 EM +P A LW ESGR YG EM RL DR+ + + GPTHEE T+I Sbjct: 61 MENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKDRHGRESLLGPTHEETFTEIIGK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NIKSYKQMPIALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDKQFDDQKHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R G++ P+ A SG +GG S EF A GE + ++ D Sbjct: 181 YKKIFKRCGVEVYPVIANSGTMGGKNSTEFQAPAAIGEDVIATNETGTYSANLEMARSID 240 Query: 241 DI---ISLNSIVEQWTAPYAATSDVHNEKLFDS 270 +E+ P AT + +E L Sbjct: 241 TFSPEKEELKPLEKVATPDCATIEQLSEFLHVP 273 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 94/193 (48%), Gaps = 2/193 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A N D + IEVGHIF GT Y+ M+A F +GK Sbjct: 376 DFKVNEFADLRTANAGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTNSMNAKFLDQNGKTQ 435 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + MGSYGIG R+++A++E I WP VAPF+I +I + + +K+ Sbjct: 436 PIIMGSYGIGVTRMLSAIVEQHSTDNSIFWPKEVAPFEIHIIQMNMKNDEQTVVSKKLEE 495 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 S DV +DD E+ G +F ADL+G P+++IVG + VS+ VE+K +MS Sbjct: 496 IFSDK-YDVLYDDRNERPGVKFNDADLIGAPIRIIVGRR-VSEQIVEVKKSTEQESVEMS 553 Query: 431 LEEVINYASHRFS 443 L+ + Y S Sbjct: 554 LDSLTEYISKELR 566 >gi|222475619|ref|YP_002564036.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Florida] gi|255003612|ref|ZP_05278576.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Puerto Rico] gi|254783506|sp|B9KH76|SYT_ANAMF RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|222419757|gb|ACM49780.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Florida] Length = 636 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 75/438 (17%), Positives = 143/438 (32%), Gaps = 40/438 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 + Y + + RD + L I + G W G + IR + Sbjct: 230 LASYIHNMQEAEKRDHRKIAKDLGWF--HIQNEALGQVFWHDKGWVIYRIIEEYIRCKLK 287 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G +E+ P + LW +SG ++ + + M + D + K + P + IF+S I Sbjct: 288 KHGYLEVKTPIMLDRKLWEKSGHWEKFKENMFVVED-DKKELAIKPMNCPCHVQIFKSKI 346 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY+ LP + + R+E +G+MR R F DA+ F + + + Sbjct: 347 RSYKELPIRMAEFGMCHRNEPSGSLYGLMRVRGFTQDDAHIFCTHEQVRDE-VLRFYELL 405 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ G S+ ++ P S E D S + Sbjct: 406 MEVYKDFGFDSVTVKLSDRPENRIGSDE-----------------IWDRSEQSLMEPMNA 448 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + +I + A Y + L DS+ + ++ G A Sbjct: 449 LGVQYTINKGEGAFYGPKLEF---TLKDSIGREWQCGTVQLDFVLPDRLG--------AY 497 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G DGK H + +G + ++ + G W + I Sbjct: 498 YIGEDGKKHIPVIIHRAVLGTIERFIGILIEHYAGNIPAW------LAPVQLEILTVSGE 551 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + + S+ V + E I + A P+ +VG D V ++ Sbjct: 552 VAEYARDLAEMASQENVRVELNAAEENISHKIRKAIFNKVPIVWVVGKSEAGDRCVSVRR 611 Query: 421 RLTGIREDMSLEEVINYA 438 +G M+ + + Sbjct: 612 YGSGETCRMAAGKALKTL 629 >gi|312966332|ref|ZP_07780558.1| prolyl-tRNA synthetase [Escherichia coli 2362-75] gi|312289575|gb|EFR17469.1| prolyl-tRNA synthetase [Escherichia coli 2362-75] gi|323190405|gb|EFZ75680.1| prolyl-tRNA synthetase [Escherichia coli RN587/1] Length = 547 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 111/210 (52%), Positives = 148/210 (70%), Gaps = 1/210 (0%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 MLR GMI + + G+Y+WLP G + L V I+REE N GAIE+ +P +Q ++LW ESGR Sbjct: 1 MLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSELWQESGR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 ++ YG E+LR+ADR D+ + GPTHEEV+TD+ R+ + SY+ LP FYQIQ KFRDE+RP Sbjct: 61 WEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRP 120 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 RFGVMRSREFLMKDAYSF + E + +Y+ M+ +Y +IF R+GL ++A++G IGG Sbjct: 121 RFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGGS 180 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 SHEF VLA +GE V S D+ E Sbjct: 181 ASHEFQVLAQSGEDDVVFSDT-SDYAANIE 209 Score = 174 bits (440), Expect = 4e-41, Method: Composition-based stats. Identities = 66/187 (35%), Positives = 113/187 (60%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 360 ADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 419 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 420 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 479 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++++ Sbjct: 480 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVD 539 Query: 437 YASHRFS 443 Y + Sbjct: 540 YLVKQIK 546 >gi|255004741|ref|ZP_05279542.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Virginia] Length = 636 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 75/438 (17%), Positives = 143/438 (32%), Gaps = 40/438 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 + Y + + RD + L I + G W G + IR + Sbjct: 230 LASYIHNMQEAEKRDHRKIAKDLGWF--HIQNEALGQVFWHDKGWVIYRIIEEYIRCKLK 287 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G +E+ P + LW +SG ++ + + M + D + K + P + IF+S I Sbjct: 288 KHGYLEVKTPIMLDRKLWEKSGHWEKFKENMFVVED-DKKELAIKPMNCPCHVQIFKSKI 346 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY+ LP + + R+E +G+MR R F DA+ F + + + Sbjct: 347 RSYKELPIRMAEFGMCHRNEPSGSLYGLMRVRGFTQDDAHIFCTHEQVRDE-VLRFYELL 405 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ G S+ ++ P S E D S + Sbjct: 406 MEVYKDFGFDSVTVKLSDRPENRIGSDE-----------------IWDRSEQSLMEPMNA 448 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + +I + A Y + L DS+ + ++ G A Sbjct: 449 LGVQYTINKGEGAFYGPKLEF---TLKDSIGREWQCGTVQLDFVLPDRLG--------AY 497 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G DGK H + +G + ++ + G W + I Sbjct: 498 YIGEDGKKHIPVIIHRAVLGTIERFIGILIEHYAGNIPAW------LAPVQLEILTVSGE 551 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + + S+ V + E I + A P+ +VG D V ++ Sbjct: 552 VAEYARDLAEMASQENVRVELNAAEENISHKIRKAIFNKVPIVWVVGKSEAGDRCVSVRR 611 Query: 421 RLTGIREDMSLEEVINYA 438 +G M+ + + Sbjct: 612 YGSGETCRMAAGKALKTL 629 >gi|120403545|ref|YP_953374.1| threonyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1] gi|166225469|sp|A1T868|SYT_MYCVP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|119956363|gb|ABM13368.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Mycobacterium vanbaalenii PYR-1] Length = 691 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 63/445 (14%), Positives = 130/445 (29%), Gaps = 49/445 (11%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 I + RD +L L + + G+ + P G + R + G + Sbjct: 258 IEEAQKRDHRKLGVELDLFS-FPDELGSGLPVFHPKGGVVRRELEEYSRRKHIEAGYEFV 316 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDI 117 + P + L++ SG + Y M + + P + + I Sbjct: 317 NTPHITKEHLYITSGHLEWYADGMFPAMHIDAEYNDDGTVRKPGQDYYLKPMNCPMHHLI 376 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 +RS +SYR LP ++ +R E G+ R R DA+ + E + Sbjct: 377 YRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTREEMRDEL-AR 435 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + L + GL + + + S D + + Sbjct: 436 LLQFVLDLLADYGLDDFYLELST----------------KDPDKFVGSDDMWEEATETLR 479 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + A Y + ++ D+L N ++S ++ F ++ Sbjct: 480 EVAESSGLHLVPDPGGAAFYGPKI---SVQVRDALGRNWQMSTIQLD----FNMPDRF-- 530 Query: 297 PMSATFKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 + ADG + G++ V+ + G W V I + Sbjct: 531 --ELEYTAADGTRKRPVLIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPVA--- 585 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 + + A+L +G D +++ + P ++ G + V Sbjct: 586 ---DDHIRYLDGLVAQLRALGIRAEVDTSDDRMAKKIVNHTNQKVPFMLLAGDRDVEAEA 642 Query: 416 VEIKHRLTGIREDMSLEEVINYASH 440 V + + E+ + Sbjct: 643 VSFRFGDRTQVNGVPREQAVAAIVD 667 >gi|254995424|ref|ZP_05277614.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Mississippi] Length = 636 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 75/438 (17%), Positives = 142/438 (32%), Gaps = 40/438 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 + Y + + RD + L I + G W G + IR + Sbjct: 230 LASYIHNMQEAEKRDHRKIAKDLGWF--HIQNEALGQVFWHDKGWVIYRIIEEYIRCKLK 287 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G E+ P + LW +SG ++ + + M + D + K + P + IF+S I Sbjct: 288 KHGYHEVKTPIMLDRKLWEKSGHWEKFKENMFVVED-DKKELAIKPMNCPCHVQIFKSKI 346 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY+ LP + + R+E +G+MR R F DA+ F + + + Sbjct: 347 RSYKELPIRMAEFGMCHRNEPSGSLYGLMRVRGFTQDDAHIFCTHEQVRDE-VLRFYELL 405 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ G S+ ++ P S E D S + Sbjct: 406 MEVYKDFGFDSVTVKLSDRPENRIGSDE-----------------IWDRSEQSLMEPMNA 448 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + +I + A Y + L DS+ + ++ G A Sbjct: 449 LGVQYTINKGEGAFYGPKLEF---TLKDSIGREWQCGTVQLDFVLPDRLG--------AY 497 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G DGK H + +G + ++ + G W + I Sbjct: 498 YIGEDGKKHIPVIIHRAILGTIERFIGILIEHYAGNIPAW------LAPVQLEILTVSGE 551 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + + S+ V + E I + A P+ +VG D V ++ Sbjct: 552 VAEYARDLAEMASQENVRVELNAAEENISHKIRKAIFNKVPIVWVVGKSEAGDRCVSVRR 611 Query: 421 RLTGIREDMSLEEVINYA 438 +G M+ + + Sbjct: 612 YGSGETCRMAAGKALKTL 629 >gi|289548806|ref|YP_003473794.1| prolyl-tRNA synthetase [Thermocrinis albus DSM 14484] gi|289182423|gb|ADC89667.1| prolyl-tRNA synthetase [Thermocrinis albus DSM 14484] Length = 570 Score = 201 bits (512), Expect = 2e-49, Method: Composition-based stats. Identities = 108/239 (45%), Positives = 155/239 (64%), Gaps = 1/239 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+YF +++P D E SHK +++ G I Q + G+Y + P + L + +I+R+E Sbjct: 1 MRWSRYFWYTSKDDPADVEAPSHKYLVKGGFIKQIASGVYQYTPPALRVLRKIESIVRKE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +RTGA E+ + L A+LW E+GR+D YG+E+ L DR+ + GPTHEE +TD+FRS Sbjct: 61 MDRTGAQEVLLTVLNPAELWRETGRWDLYGRELFTLKDRHGRDYCLGPTHEEEVTDLFRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++ SYR LP YQIQ+KFRDE RPRFG++R+REF+MKDAYSFDL + SY M + Sbjct: 121 YVTSYRQLPLILYQIQVKFRDEKRPRFGLIRAREFIMKDAYSFDLDEFSAIMSYEAMKFA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 Y RIF ++ LK++ + A G IGG SHEF+VL D GE +V ++ + +E Sbjct: 181 YDRIFKKMRLKTLMVEASVGAIGGKSSHEFVVLTDYGEARVAYCENCS-YAANAEIVPL 238 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 79/194 (40%), Positives = 110/194 (56%), Gaps = 3/194 (1%) Query: 255 PYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 Y DV + D P+ RG+EVGHIF GT+YS PM A K ++GKD V Sbjct: 377 HYGDMVDVCQVEEGDPCPKCGAPLKVNRGLEVGHIFLLGTRYSEPMKAFVKDSEGKDVPV 436 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG YGIG R ++A++E HD KGI WP VAPF++ ++ + D+ R EK+Y Sbjct: 437 VMGCYGIGISRCMSAIVEQHHDEKGIKWPTPVAPFELDIVCVNISDEEQRAVAEKLYTTA 496 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 ++G +V +DD E GS+FA ADL GFP +++VG K V + KVE++ R TG R D +E Sbjct: 497 QEMGVEVLYDDRDESPGSKFADADLCGFPYRIVVGKK-VKEGKVEVQSRHTGERWDAPIE 555 Query: 433 EVINYASHRFSNNR 446 E + + Sbjct: 556 EAVGQVKELIHQEK 569 >gi|322374996|ref|ZP_08049510.1| proline--tRNA ligase [Streptococcus sp. C300] gi|321280496|gb|EFX57535.1| proline--tRNA ligase [Streptococcus sp. C300] Length = 617 Score = 201 bits (512), Expect = 2e-49, Method: Composition-based stats. Identities = 105/257 (40%), Positives = 148/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L +V Sbjct: 241 QEEIKTELLKWMVSGED 257 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E G+ +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGVNFPKELAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + +K+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTDKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + ++ + + Sbjct: 593 IKATGDTIEVHADNLLETL--EILSKK 617 >gi|312864390|ref|ZP_07724623.1| proline--tRNA ligase [Streptococcus downei F0415] gi|311100111|gb|EFQ58322.1| proline--tRNA ligase [Streptococcus downei F0415] Length = 633 Score = 201 bits (512), Expect = 2e-49, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 162/305 (53%), Gaps = 3/305 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P L+E P DA++ SH LM+R G + Q + G+YS+LPL + ++ I+REE Sbjct: 15 MKQSQMLIPTLREMPSDAQVISHALMVRAGYVRQVTAGVYSYLPLANRVIEKFKTIMREE 74 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L +ADLW ESGRY++YG ++ +L +R+ I GPTHEE T + R Sbjct: 75 FDKIGAVEMLAPALLTADLWKESGRYETYGDDLYKLKNRDQAEFILGPTHEETFTALVRD 134 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y + Sbjct: 135 SIKSYKQLPMNLYQIQAKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDEAYEAYRQA 194 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + + G +GG S EF+ + + +D I S + + Sbjct: 195 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAVTP--DRTDLDHWVVLDKSISSLDEIPE 252 Query: 241 DI-ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D+ + + +W T ++ + + E + + TK S P Sbjct: 253 DVLAQIKDELNKWLVSGEDTIAYSDQSGYAANLEMATSLYKPSQAATTQEELTKVSTPDC 312 Query: 300 ATFKG 304 T Sbjct: 313 KTIDD 317 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 104/195 (53%), Gaps = 16/195 (8%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ K + P+ + ARGIE+GHIF GT+YS M A +G+ + MG Y Sbjct: 434 VDIREVKEGEPSPDGQGTLKFARGIEIGHIFKLGTRYSDSMGANILDENGRSIPIIMGCY 493 Query: 318 GIGAMRVVAAVIESSHD-------------GKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 GIG R+++AVIE GI +P +APF + LI + DQV +D Sbjct: 494 GIGVSRILSAVIEQHARLFVNKTPKGAYRFSWGINFPKELAPFDVHLITVNTKDQVAQDL 553 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + ++L K G V DD E++GS+F+ +DL+G P++V VG K ++ VE+K + TG Sbjct: 554 TANLESQLVKAGYQVLTDDRNERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATG 612 Query: 425 IREDMSLEEVINYAS 439 +++ + ++ + Sbjct: 613 DTIEVNAQNLLETLT 627 >gi|303557|dbj|BAA03654.1| DrpA protein [Escherichia coli W3110] Length = 155 Score = 201 bits (512), Expect = 2e-49, Method: Composition-based stats. Identities = 91/155 (58%), Positives = 116/155 (74%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y L L+E P DAE+ SH+LMLR GMI + + G+Y+WLP G + L V I+REE Sbjct: 1 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N GAIE+S+P +Q ADLW ESGR++ YG E+LR DR ++ + GPTHEEV+TD+ R+ Sbjct: 61 MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREF 155 + SY+ LP FYQIQ KFRDE+RPRFGVMRSREF Sbjct: 121 ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREF 155 >gi|325913484|ref|ZP_08175850.1| proline--tRNA ligase [Lactobacillus iners UPII 60-B] gi|325477253|gb|EGC80399.1| proline--tRNA ligase [Lactobacillus iners UPII 60-B] Length = 566 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 109/273 (39%), Positives = 143/273 (52%), Gaps = 3/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DA SH+LMLR G I Q + G+Y++LPL L II EE Sbjct: 1 MRQSILFIPTLKEVPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLAYLVLRKAEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 EM +P A LW ESGR YG EM RL DR+ + + GPTHEE T+I Sbjct: 61 MENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKDRHGRESLLGPTHEETFTEIIGK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NIKSYKQMPIALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDKQFDDQKHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R G++ P+ A SG +GG S EF A GE + ++ D Sbjct: 181 YKKIFKRCGVEVYPVIANSGTMGGKNSTEFQAPAAIGEDVIATNETGTYSANLEMARSID 240 Query: 241 DI---ISLNSIVEQWTAPYAATSDVHNEKLFDS 270 +E+ P AT + +E L Sbjct: 241 TFSPEKEELKPLEKVATPDCATIEQLSEFLHVP 273 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 95/193 (49%), Gaps = 2/193 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A N D + IEVGHIF GT Y+ M+A F +GK Sbjct: 376 DFKVNEFADLRTANAGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTNSMNAKFLDQNGKTQ 435 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + MGSYGIG R+++A++E GI WP VAPF+I +I + + +K+ Sbjct: 436 PIIMGSYGIGVTRMLSAIVEQHSTDNGIFWPKEVAPFEIHIIQMNMKNDEQTVVSKKLEE 495 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 S DV +DD E+ G +F ADL+G P+++IVG + VS+ VE+K +MS Sbjct: 496 IFSDK-YDVLYDDRNERPGVKFNDADLIGAPIRIIVGRR-VSEQIVEVKKSTEQESVEMS 553 Query: 431 LEEVINYASHRFS 443 L+ + Y S Sbjct: 554 LDSLTEYISKELR 566 >gi|329919866|ref|ZP_08276804.1| proline--tRNA ligase [Lactobacillus iners SPIN 1401G] gi|328936956|gb|EGG33386.1| proline--tRNA ligase [Lactobacillus iners SPIN 1401G] Length = 566 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 109/273 (39%), Positives = 143/273 (52%), Gaps = 3/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DA SH+LMLR G I Q + G+Y++LPL L II EE Sbjct: 1 MRQSILFIPTLKEVPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLAYLVLRKAEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 EM +P A LW ESGR YG EM RL DR+ + + GPTHEE T+I Sbjct: 61 MENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKDRHGRESLLGPTHEETFTEIIGK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NIKSYKQMPIALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDKQFDDQKHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R G++ P+ A SG +GG S EF A GE + ++ D Sbjct: 181 YKKIFKRCGVEVYPVIANSGTMGGKNSTEFQAPAAIGEDVIATNETGTYSANLEMARSID 240 Query: 241 DI---ISLNSIVEQWTAPYAATSDVHNEKLFDS 270 +E+ P AT + +E L Sbjct: 241 TFSPEKEELKPLEKVATPDCATIEQLSEFLHVP 273 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 95/193 (49%), Gaps = 2/193 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A N D + IEVGHIF GT Y+ M+A F +GK Sbjct: 376 DFKVNEFADLRTANAGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTNSMNAKFLDQNGKTQ 435 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + MGSYGIG R+++A++E GI WP VAPF+I +I + + +K+ Sbjct: 436 PIIMGSYGIGVTRMLSAIVEQHSTDNGIFWPKEVAPFEIHIIQMNMKNDEQTVVSKKLEE 495 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 S DV +DD E+ G +F ADL+G P+++IVG + VS+ VE+K +MS Sbjct: 496 IFSDK-YDVLYDDRNERPGVKFNDADLIGAPIRIIVGRR-VSEQIVEVKKSTEQESVEMS 553 Query: 431 LEEVINYASHRFS 443 L+ + Y S Sbjct: 554 LDSLTEYISKELR 566 >gi|309809554|ref|ZP_07703412.1| proline--tRNA ligase [Lactobacillus iners SPIN 2503V10-D] gi|308170226|gb|EFO72261.1| proline--tRNA ligase [Lactobacillus iners SPIN 2503V10-D] Length = 483 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 110/273 (40%), Positives = 144/273 (52%), Gaps = 3/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DA SH+LMLR G I Q + G+Y++LPL L N II EE Sbjct: 1 MRQSILFIPTLKEVPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLAYLVLRNAEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 EM +P A LW ESGR YG EM RL DR+ + + GPTHEE T+I Sbjct: 61 MENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKDRHGRESLLGPTHEETFTEIIGK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NIKSYKQMPIALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDKQFDDQKHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R G++ P+ A SG +GG S EF A GE + ++ D Sbjct: 181 YKKIFKRCGVEVYPVIANSGTMGGKNSTEFQAPAAIGEDVIATNETGTYSANLEMARSID 240 Query: 241 DI---ISLNSIVEQWTAPYAATSDVHNEKLFDS 270 +E+ P AT + +E L Sbjct: 241 TFSPEKEELKPLEKIATPDCATIEQLSEFLHVP 273 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 38/108 (35%), Positives = 52/108 (48%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A N D + IEVGHIF GT Y+ M+A F +GK Sbjct: 376 DFKVNEFADLRTANAGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTNSMNAKFLDQNGKTQ 435 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + MGSYGIG R+++A++E GI WP VAPF+I +I + Sbjct: 436 PIIMGSYGIGVTRMLSAIVEQHSTDNGIFWPKEVAPFEIHIIQMNMKK 483 >gi|171741061|ref|ZP_02916868.1| hypothetical protein BIFDEN_00127 [Bifidobacterium dentium ATCC 27678] gi|171276675|gb|EDT44336.1| hypothetical protein BIFDEN_00127 [Bifidobacterium dentium ATCC 27678] Length = 611 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 104/284 (36%), Positives = 153/284 (53%), Gaps = 2/284 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DA++ S KL+ R + + + GI++WLPLG L+ + IIREE Sbjct: 6 RMSTMFLRTLREDPADADVVSDKLLQRACYLRKAAPGIWTWLPLGLTVLNKIENIIREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 A E+ L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 66 ASIDAQEVHFSGLLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDL 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF L EG +Y +Y Sbjct: 126 YSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTLDKEGLVKAYMDERGAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF RL LK +P+ A +GP+GG S EF+ + GE S + + + T + Sbjct: 186 ERIFDRLDLKYVPVHAMAGPMGGFESEEFLAPMEIGEDTFAQSPSGKAWNVEALTTPEPE 245 Query: 242 IISLNSI--VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 I E+ P AAT D E + P + + + + Sbjct: 246 AIDCTDTPAAEKRPTPDAATIDKMVEFANANHPRSDGRAWQASD 289 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 4/189 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ RG+E+G +F G KYS + +GK V MG Sbjct: 420 GTVEAVEVRHGDMSPDGSGPLSFERGVEIGQVFQLGLKYSNALGLKVLDQNGKTVPVWMG 479 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG RV+A + E+ HD KG+ W +V + D +A E++ A L Sbjct: 480 SYGIGVSRVMACIAETHHDDKGLAW-PAVIAPAQVHVVATGKDAAAFEAAEQLIAELEAK 538 Query: 376 GCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD + G +F A+L+G PL + G V++ +E++ R E + + + Sbjct: 539 GIEVIFDDRKKVSPGVKFKDAELIGVPLIAVAGRDTVNNGTIEVRDRNGENAEAVPVADA 598 Query: 435 INYASHRFS 443 + R + Sbjct: 599 AQVIADRVA 607 >gi|182414610|ref|YP_001819676.1| prolyl-tRNA synthetase [Opitutus terrae PB90-1] gi|177841824|gb|ACB76076.1| prolyl-tRNA synthetase [Opitutus terrae PB90-1] Length = 590 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 169/290 (58%), Gaps = 16/290 (5%) Query: 1 MR-RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 M+ S+YF+P L+E+P DAEIASHKL++R G++ + G+Y++LPLG + + + + RE Sbjct: 1 MKLWSQYFVPTLKESPADAEIASHKLLIRAGLVRKLGGGLYTYLPLGLRVMQKLTQLCRE 60 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR-------LADRNDKAMIYGPTHEE 112 E R GAIE+ +P + +LW + R+ + + M R + + GPTHEE Sbjct: 61 ELERAGAIELWMPHVHPVELWQQGPRWAAAREIMFRADSAGDGKHGPREPEFVLGPTHEE 120 Query: 113 VMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKH 172 ++T + ++ I SYR+LP F+QI KFR+E+RPRFG+MR+REF+M DAYSFD+ + + Sbjct: 121 IVTPLVKAEITSYRDLPKNFFQIATKFRNEIRPRFGLMRAREFVMMDAYSFDVDDDRAIK 180 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 SY M +Y F R+G+++I + A++G +GG SHEF+V A+ G+ V ++ + Sbjct: 181 SYQAMKAAYEAFFRRIGVQAIAVEADTGVMGGSFSHEFMVPAEVGDDDVIYNE-ASGYAA 239 Query: 233 PSENTDFDDI------ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 E + + VE++ P + E S+P +++ Sbjct: 240 NREKARSALVPADLSDAAPVGAVEEFATP-GVVTIAALEAAPYSVPADRQ 288 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 61/157 (38%), Positives = 83/157 (52%) Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 RGIEVGHIF GTKYS A + + H + MGSYGIG R + A+IE SHD Sbjct: 414 PLQVRRGIEVGHIFKLGTKYSEKSGAVYTDDQKQSHLMVMGSYGIGISRTLQAIIEQSHD 473 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 GI+WP + APF + + + D K+ A K G +V DD E+ G +F Sbjct: 474 ADGIVWPWNSAPFHVLICVLDPQLAEAVDLARKLAAAAEKAGAEVLVDDRAERPGVKFKD 533 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 ADL+G PL++ +G K + + VE+K R + L Sbjct: 534 ADLVGIPLRLTIGGKGLKEGVVELKWRHQKDVAKVPL 570 >gi|194477323|ref|YP_002049502.1| prolyl-tRNA synthetase [Paulinella chromatophora] gi|171192330|gb|ACB43292.1| prolyl-tRNA synthetase [Paulinella chromatophora] Length = 604 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 112/248 (45%), Positives = 153/248 (61%), Gaps = 3/248 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S L L+++P +AE+ SHKL+LR G I + + GIY++LPL + L +++ +REE Sbjct: 1 MRVSHLMLVTLRDDPAEAEVISHKLLLRAGYIRRVTIGIYAYLPLLWRVLKKISSCVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 GAIE+ +P LQ AD+W S R+ Y + M L DR + + GPTHEEV+T++ Sbjct: 61 MTSAGAIELLMPQLQPADIWQLSKRWAGYTQGEGIMFNLKDRQGRELALGPTHEEVVTNL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 + IKSYR LP T YQIQ KFRDE+RPRFG+MRSREF+MKDAYSF + K SY++M Sbjct: 121 VDNLIKSYRQLPCTLYQIQTKFRDEIRPRFGLMRSREFVMKDAYSFHSSEIDLKVSYDRM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 + Y IF R GL + + A+SG IGG S EF+V A+ GE + S+D Sbjct: 181 DLGYRNIFRRCGLNVVAVEADSGSIGGAASQEFMVTAEAGEDLILISEDKSYAANQERAI 240 Query: 238 DFDDIISL 245 I + Sbjct: 241 SLPKIAFI 248 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 60/187 (32%), Positives = 96/187 (51%), Gaps = 4/187 (2%) Query: 260 SDVHNEKLFDSLPENK---RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 D+ + D N RGIEVGHIF G KYS+ ++A + G MG Sbjct: 410 VDLRAAQANDQCIHNPIYTLTENRGIEVGHIFRLGHKYSIALNANYTNEIGNQEPFWMGC 469 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R+ A +E HD KGI WP S+APF++ ++ + D++ R E +Y+ + Sbjct: 470 YGIGISRLSQAAVEQHHDQKGICWPLSIAPFEVIIVIVSIQDEIQRTLGEALYSIMKAAR 529 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD ++ G +F ADL+G P Q+++G + ++++E+ R+T E + ++ Sbjct: 530 VDVLIDDRQDRAGVKFKDADLIGIPWQIVIG-RGAINNQIELVERITSRSEQLDAGYLVK 588 Query: 437 YASHRFS 443 Y Sbjct: 589 YFLQYLE 595 >gi|309804213|ref|ZP_07698290.1| proline--tRNA ligase [Lactobacillus iners LactinV 11V1-d] gi|312875784|ref|ZP_07735776.1| proline--tRNA ligase [Lactobacillus iners LEAF 2053A-b] gi|308163616|gb|EFO65886.1| proline--tRNA ligase [Lactobacillus iners LactinV 11V1-d] gi|311088688|gb|EFQ47140.1| proline--tRNA ligase [Lactobacillus iners LEAF 2053A-b] Length = 566 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 109/273 (39%), Positives = 143/273 (52%), Gaps = 3/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DA SH+LMLR G I Q + G+Y++LPL L II EE Sbjct: 1 MRQSILFIPTLKEVPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLAYLVLRKAEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 EM +P A LW ESGR YG EM RL DR+ + + GPTHEE T+I Sbjct: 61 MENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKDRHGRESLLGPTHEETFTEIIGK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NIKSYKQMPIALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDKQFDDQKHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R G++ P+ A SG +GG S EF A GE + ++ D Sbjct: 181 YKKIFKRCGVEVYPVIANSGTMGGKNSTEFQAPAAIGEDVIATNETGTYSANLEMARSID 240 Query: 241 DI---ISLNSIVEQWTAPYAATSDVHNEKLFDS 270 +E+ P AT + +E L Sbjct: 241 TFSPEKEELKPLEKIATPDCATIEQLSEFLHVP 273 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 95/193 (49%), Gaps = 2/193 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A N D + IEVGHIF GT Y+ M+A F +GK Sbjct: 376 DFKVNEFADLRTANAGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTNSMNAKFLDQNGKTQ 435 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + MGSYGIG R+++A++E GI WP VAPF+I +I + + +K+ Sbjct: 436 PIIMGSYGIGVTRMLSAIVEQHSTDNGIFWPKEVAPFEIHIIQMNMKNDEQTVVSKKLEE 495 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 S DV +DD E+ G +F ADL+G P+++IVG + VS+ VE+K +MS Sbjct: 496 IFSDK-YDVLYDDRNERPGVKFNDADLIGAPIRIIVGRR-VSEQIVEVKKSTEQESVEMS 553 Query: 431 LEEVINYASHRFS 443 L+ + Y S Sbjct: 554 LDSLTEYISKELR 566 >gi|62126444|gb|AAX64147.1| proline tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] Length = 547 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 111/210 (52%), Positives = 148/210 (70%), Gaps = 1/210 (0%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 MLR GMI + + G+Y+WLP G + L V I+REE N GAIE+S+P +Q ADLW ESGR Sbjct: 1 MLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 ++ YG E+LR DR ++ + GPTHEEV+TD+ R+ + SY+ LP F+QIQ KFRDE+RP Sbjct: 61 WEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRNELSSYKQLPLNFFQIQTKFRDEVRP 120 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 RFGVMRSREFLMKDAYSF + E + +Y+ M+ +Y RIF R+GL ++A++G IGG+ Sbjct: 121 RFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAAYSRIFSRMGLDFRAVQADTGSIGGN 180 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 SHEF VLA +GE + S D+ E Sbjct: 181 ASHEFQVLAQSGEDDIVFSD-VSDYAANIE 209 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 358 VVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 417 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE + D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 418 CYGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 477 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R +G + + ++ Sbjct: 478 QGIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGKKSLIKTGDI 537 Query: 435 INYASHRFS 443 ++Y Sbjct: 538 VDYLVKAIK 546 >gi|331267089|ref|YP_004326719.1| prolyl-tRNA synthetase [Streptococcus oralis Uo5] gi|326683761|emb|CBZ01379.1| prolyl-tRNA synthetase [Streptococcus oralis Uo5] Length = 617 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 105/257 (40%), Positives = 148/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L +V Sbjct: 241 QEEIKAELLKWMVSGED 257 Score = 143 bits (360), Expect = 7e-32, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E G+ +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGVNFPKELAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + ++ + + Sbjct: 593 IKATGDTIEVHADNLLETL--EILSKK 617 >gi|315638151|ref|ZP_07893333.1| proline--tRNA ligase [Campylobacter upsaliensis JV21] gi|315481687|gb|EFU72309.1| proline--tRNA ligase [Campylobacter upsaliensis JV21] Length = 568 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 114/358 (31%), Positives = 169/358 (47%), Gaps = 14/358 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+++ P +E P+DA + SH + R G I Q+ G+Y++LPLG+ + +II+EE Sbjct: 1 MKFSQFYAPTFKEAPKDATLPSHIFLTRAGFIEQNGSGLYNFLPLGKMVYSKIESIIKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+E S+ A W ESGRY+ +GKE+LR DR + + GPTHEE M ++ ++ Sbjct: 61 MDKAGALETSLSFTTPASFWRESGRYNVFGKELLRFKDRKENDFVLGPTHEEAMLNVVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQ+ LKFRDE RPRFG++R REF+MKDAYSF E + M + Sbjct: 121 KITSYKQLPLNLYQVGLKFRDEARPRFGLLRCREFVMKDAYSFHKDEEDLTREFENMQGT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I RLGL + A+SG IGG S EF+VLA GE + D+ E Sbjct: 181 YSKILKRLGLDFRVVEADSGAIGGSGSKEFMVLAQNGEDDILLCSHC-DYAANIEAA--- 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 E+ A +A+ + K L E I F T ++ A Sbjct: 237 KRAKKTCEKERPEANFASKFHTPDVKTIKGL----------AEFFKIDSFYTIKAVVKKA 286 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 ++ + G + + A + I + Sbjct: 287 LYEDEARLVAFFVRGCDDLQETKAQNACKALELVDADEEELKEAGLKPGFIGFINLKN 344 Score = 140 bits (353), Expect = 5e-31, Method: Composition-based stats. Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 6/232 (2%) Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTA---PYAATSDVHNEKLFDSLP 272 G + ++D + E ++ D+ K D Sbjct: 337 IGFINLKNVDFYIDNELKDEKQMIMGANEIDYHFVGIDVVNLNEERFKDLVEVKEGDCCA 396 Query: 273 EN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 + K ++GIEVGHIF GTKYS M ATF +GK MG YG+G R+VA +E Sbjct: 397 KCGAKLTKSKGIEVGHIFKLGTKYSAAMQATFLDENGKAKPFVMGCYGMGVSRLVAVAVE 456 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 +S D +GI+W ++++PFK+ +I D+ + +Y L K+G DV DD E+ G Sbjct: 457 ASFDERGIVWQEALSPFKLVIILSNIKDEKALNLGISLYEDLRKLGIDVLLDDRNERYGV 516 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 + +L+GF +I+G K + ++++E+ R + + + + Sbjct: 517 KMNDFELMGFNYALIIG-KGLENNELELVKRKDLGKIKLKADTALTELKKVL 567 >gi|164658475|ref|XP_001730363.1| hypothetical protein MGL_2745 [Malassezia globosa CBS 7966] gi|159104258|gb|EDP43149.1| hypothetical protein MGL_2745 [Malassezia globosa CBS 7966] Length = 509 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 131/479 (27%), Positives = 204/479 (42%), Gaps = 69/479 (14%) Query: 2 RRSKYFLPILQENPRDA-----EIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAI 56 R S+ ++P DA + S + +LR G I Q + G Y++LP+G + L + AI Sbjct: 24 RLSRLYVPT---VSADALGSLDTLESVRRLLRGGYIRQSASGTYTYLPIGLRMLKKLTAI 80 Query: 57 IREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTD 116 I +E ++ A ++ +P L S LW ++GR+++ G E+ RL DR MI PTHEE +T Sbjct: 81 IEDEMHQISASQLELPQLLSPALWHKTGRFEAMGSELFRLKDRRGNDMILAPTHEEEITK 140 Query: 117 IFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 + I S ++LP +QI KFRDE RPR G++R++EFLMKD YSFD++ E ++ +Y Sbjct: 141 LVGMEIDSAKSLPVRVFQIGRKFRDEPRPRAGLLRTKEFLMKDMYSFDVSVEDARITYED 200 Query: 177 MFVSYLRIFHRLG---------LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 + +Y RIF R+ + A+SG +GG LSHEF V GE + Sbjct: 201 VLCAYERIFQRVFCWDQARSSETTWMRATADSGTMGGKLSHEFHVPDPAGEDTLLSCDQC 260 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEK----LFDSLPENKRVSARGIE 283 N + + + E+ + V N S + IE Sbjct: 261 SYTS----NVECAKSLGRGTKQEEQGHQHGRDETVTNAARAGDRCASCTHGTLREHKAIE 316 Query: 284 VGHIFYFGTKYSLPMSATFKGADGKDHYV-----QMGSYGIGAMRVVAAVIESSHDGKGI 338 VGH F GT+YS + QMG YGIG RV+ A+ + + Sbjct: 317 VGHTFLLGTRYSEALGYHVVPRHADPKRPERVPLQMGCYGIGITRVLGALAQRAAREFDA 376 Query: 339 IW--------------------PDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC- 377 + D ++ +L G Sbjct: 377 WHAATAQTSSMPLQRRRPQRVGFFWPCEIAPFRALVLPSTPQHMDIAMRLCTQL-DGGLA 435 Query: 378 ----------------DVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 DV DD +GS+ +DL+G+P+ +I+G + +VE++ Sbjct: 436 VTWADGMQELLHVPNEDVALDDRTHQSLGSRLFDSDLMGYPIVLILGKHYDQTGEVEVR 494 >gi|24380149|ref|NP_722104.1| prolyl-tRNA synthetase [Streptococcus mutans UA159] gi|81845206|sp|Q8DSJ9|SYP_STRMU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|24378150|gb|AAN59410.1|AE015006_3 putative prolyl-tRNA synthetase [Streptococcus mutans UA159] Length = 616 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 108/295 (36%), Positives = 159/295 (53%), Gaps = 14/295 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S +P L+E P DA++ SH LM+R G + Q S GIYS+LPL + ++ + I+REE Sbjct: 1 MKQSNMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYSYLPLAHRVIEKIKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L +ADLW ESGRY +YG+++ +L +R+ I GPTHEE T++ R Sbjct: 61 FDKIGAVEMLAPALLTADLWRESGRYGTYGEDLYKLKNRDQSDFILGPTHEETFTNLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y + Sbjct: 121 AVKSYKQLPLNLYQIQAKYRDEKRPRNGLLRTREFIMKDGYSFHADYDSLDATYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA------DTGETQVFCSKDFMDFPIPS 234 Y IF R+GL + + G +GG S EF+ + + + P Sbjct: 181 YEAIFTRVGLDFKAIIGDGGAMGGKDSQEFMAVTPDRTDLEHWLVLDKAIGSIEEIPADV 240 Query: 235 ENTDFDDIISLNSIVEQWTAP-----YAATSDVHNEKLFDSLPENKRVSARGIEV 284 ++ S E A YAA ++ + P NK VS I+ Sbjct: 241 LKEIKQELSSWLISGEDTIAYSSESDYAANLEMATSEYK---PNNKVVSHEDIQR 292 Score = 136 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 104/204 (50%), Gaps = 16/204 (7%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 AA D+ ++ P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FEAAYVDIREVCEGEASPDGRGVLKFARGIEIGHIFKLGTRYSESMGANILDENGRSIPI 473 Query: 313 QMGSYGIGAMRVVAAVIES-------------SHDGKGIIWPDSVAPFKISLINIKAHDQ 359 MGSYGIG R+++AVIE G+ +P ++APF + LI + D+ Sbjct: 474 IMGSYGIGVSRILSAVIEQNARIFVNKTPKGAYRFSWGVNFPKTLAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 V + K+ L V D+ E+IGS+F+ +DL+G P++V VG K SD VE+K Sbjct: 534 VSQQLTAKVEESLVDAHYSVLTDNRNERIGSKFSDSDLIGLPIRVTVGKK-ASDGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFS 443 + TG +++ E ++ S Sbjct: 593 IKSTGDTIEVNAENLLETLSILID 616 >gi|315930573|gb|EFV09608.1| Proline-tRNA ligase [Campylobacter jejuni subsp. jejuni 305] Length = 220 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 101/220 (45%), Positives = 142/220 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR +K++ P L+E P+DA + SH + R G + Q G+Y++LPLG++ LD + I++EE Sbjct: 1 MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIKNIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA E+++ + A LW ESGRY+ +GKE+LR DR + + GPTHEE M + ++ Sbjct: 61 MDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEFVLGPTHEEAMLSLVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF E + M+ + Sbjct: 121 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLGREFELMYKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQ 220 Y +I R+GL + A+SG IGG S EF+VLA GE Sbjct: 181 YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDD 220 >gi|148238958|ref|YP_001224345.1| prolyl-tRNA synthetase [Synechococcus sp. WH 7803] gi|166980165|sp|A5GJD3|SYP_SYNPW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|147847497|emb|CAK23048.1| Prolyl-tRNA synthetase [Synechococcus sp. WH 7803] Length = 594 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 113/254 (44%), Positives = 157/254 (61%), Gaps = 3/254 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P DAEI SH+L++R G I + GIY++LP+ K L +NAI+R E Sbjct: 1 MRVSRLMLVTLRDVPADAEIPSHQLLVRGGYIRRIGSGIYAYLPMMWKVLRKINAIVRAE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 N GA+E +P LQ ADLW SGR+ Y + M L DR ++ + GPTHEEV+T++ Sbjct: 61 LNHLGALETLLPQLQPADLWERSGRWQGYTEGEGIMFHLEDRQNRQLGLGPTHEEVITEL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SYR LP T YQIQ KFRDE+RPRFG+MR REF+MKDAYSF E +++Y M Sbjct: 121 AGDLLRSYRQLPVTLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHANQEDLENTYQAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y RIF R GL+++ + A+SG IGG S E++V A GE + S D + + T Sbjct: 181 ATAYARIFERCGLEAVAVDADSGAIGGAASQEYMVTAAAGEDLILTSSDGLYAANQEKAT 240 Query: 238 DFDDIISLNSIVEQ 251 + + E+ Sbjct: 241 SRPPVALPLAAGEE 254 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 95/213 (44%), Gaps = 5/213 (2%) Query: 237 TDFDDIISLNSIVEQWTA-PYAATSDVHNEKLFDSL---PENKRVSARGIEVGHIFYFGT 292 + + W A P +D+ + D P RGIEVGHIF G Sbjct: 382 VCGANSKDQHCWGRTWDAMPAQIKADLRTARAGDQCVHDPSQTLSECRGIEVGHIFQLGR 441 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 KYS + A F + G+ + MG YGIG R+ A +E HD GI WP +APF++ ++ Sbjct: 442 KYSEALDARFTNSAGQQEALLMGCYGIGISRLAQAAVEQHHDEAGISWPLGIAPFQVIVV 501 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 K D E++Y G D DD E+ G +F ADL+G P +++VG + Sbjct: 502 IAKIQDPTQVALAEELYQSFLDAGIDALLDDRDERAGVKFKDADLIGIPWRIVVG-RDAG 560 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 + KVE+ R T + +E S + Sbjct: 561 EGKVEVVERSTRCSTSVPHQEAFQQVKDSISTH 593 >gi|325527705|gb|EGD04994.1| threonyl-tRNA synthetase [Burkholderia sp. TJI49] Length = 406 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 80/426 (18%), Positives = 143/426 (33%), Gaps = 41/426 (9%) Query: 17 DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS 76 D + +KL L S G W P G L V IR + G E+ P + + Sbjct: 5 DHRVLGNKLELF--HQQDESPGAIFWHPRGMVLLRVVEDYIRARMRQAGFSEVRTPQIIA 62 Query: 77 ADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 LW +SG ++ +G+ M L +D+ P IFR ++SYR+LP + + Sbjct: 63 RSLWEQSGHWEKFGRGMFSLQ-SDDRPYCLKPMSCPCHVQIFRKGVRSYRDLPVRYSEFG 121 Query: 137 LKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 R E G+MR+R F DA+ P+ + + + I+ G + Sbjct: 122 AVHRAEPSGALHGLMRARAFTQDDAHVLCR-PDQVEAEVARFCMLLKSIYADFGFGGFDV 180 Query: 196 RAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP 255 + P + D + S+ A Sbjct: 181 ALSTRPAVR-----------------AGDEAVWDRAEAMLASAARAAGLDFSVRAGEGAF 223 Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD-HYVQM 314 Y + H L D + ++ G A + DG V + Sbjct: 224 YGPKLEFH---LLDRQGRQWQCGTIQLDFVLPERLG--------AAYVAEDGARAVPVML 272 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 +G++ V+ ++G W ++ HD+ R +++ + Sbjct: 273 HHAVLGSLERFIGVLLEHYEGWLPTWLAPDQIVVANI----GHDE--RAFADRVASAFEA 326 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +GC V D E++ + A L P+ + G K V ++ R G + +SL + Sbjct: 327 IGCRVLRDFRAERLPRKIFDARALAAPIVAVTGRKEALAGAVSLRMR-NGESQVLSLADA 385 Query: 435 INYASH 440 + + Sbjct: 386 LAHLKQ 391 >gi|168485970|ref|ZP_02710478.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00] gi|183570860|gb|EDT91388.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00] Length = 617 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 106/257 (41%), Positives = 147/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLTPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L IV Sbjct: 241 QEEIKAELLKWIVSGED 257 Score = 142 bits (359), Expect = 8e-32, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + V+ + + Sbjct: 593 IKATGDTIEVHADNVLETL--EILSKK 617 >gi|85093975|ref|XP_959801.1| threonyl-tRNA synthetase [Neurospora crassa OR74A] gi|28921255|gb|EAA30565.1| threonyl-tRNA synthetase [Neurospora crassa OR74A] Length = 788 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 82/479 (17%), Positives = 154/479 (32%), Gaps = 70/479 (14%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD + + L + S G WLP G + + + I+EE + G E+ Sbjct: 314 LEEAAKRDHRLIGKQQELF--YFEECSPGSAMWLPHGMRINNAIMEYIKEEYWKRGYDEV 371 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P + + LW +SG Y +M L D + + P + +FR +S++ LP Sbjct: 372 MTPNMFNVALWEQSGHLAHYKDDMFIL-DVDKEQFGLKPMNCPAHAMMFRHRDRSHKELP 430 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 + R+E G+ R R F DA+ F + K +F + L Sbjct: 431 LRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCR-EDQIKAEVADLFDFMKSFYGML 489 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 GL ++ + P E A+ + + N + Sbjct: 490 GLTFK-LKLSTRPEKYMGEIETWDRAEARLKE-------------ALNEFVAATGGTWEL 535 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD-- 306 E A Y D+ + D L + + ++ F +Y + + D Sbjct: 536 NEGDGAFYGPKIDI---AVLDCLNRPWQCATIQLDFQQPINFSLEYMTADAQAKQDEDKA 592 Query: 307 ------------------------------------GKDHYVQMGSYGIGAMRVVAAVIE 330 G V + G++ A++ Sbjct: 593 ASKAAKPEAPKEEEEAPKEGEEKKKKALLVKKPLTAGCARPVMIHRAMAGSIERFTAILA 652 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 + WP ++P ++ +I + D +++ L K V D G + Sbjct: 653 ---EHFAGKWPFWMSPRQVMVIPVGMG---FLDYAKEVALTLKKEKIHVDVDSSGNTLQK 706 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED----MSLEEVINYASHRFSNN 445 + A L + +VG ++ KV I++R + SLEE + ++ Sbjct: 707 KIRSAQLAQYNFIFVVGDDEKTNRKVNIRYRDDTSTQARDVPYSLEEAVEKLRALKADR 765 >gi|306825925|ref|ZP_07459263.1| proline--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431857|gb|EFM34835.1| proline--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 617 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 105/257 (40%), Positives = 147/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYNSLDVTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L +V Sbjct: 241 QEEIKAELLKWMVSGED 257 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE G+ +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVIEQHARLFVNKTPKGEYRYAWGVNFPKELAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L + G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEASLMEAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + ++ + + Sbjct: 593 IKATGDTIEVHADNLLETL--EILSKK 617 >gi|302191444|ref|ZP_07267698.1| prolyl-tRNA synthetase [Lactobacillus iners AB-1] Length = 566 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 109/273 (39%), Positives = 144/273 (52%), Gaps = 3/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DA SH+LMLR G I Q + G+Y++LPL L II EE Sbjct: 1 MRQSILFIPTLKEVPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLAYLVLRKAEKIIEEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 EM +P A LW ESGR YG EM RL DR+ + + GPTHEE T+I Sbjct: 61 MENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKDRHGRESLLGPTHEETFTEIIGK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 121 NIKSYKQMPIALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDKQFDDQKHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R G++ P+ A SG +GG S EF A GE + ++ D Sbjct: 181 YKKIFKRCGVEVYPVIANSGTMGGKNSTEFQAPAAIGEDVIATNETGTYSANLEMARSID 240 Query: 241 DI---ISLNSIVEQWTAPYAATSDVHNEKLFDS 270 +E+ + P AT + +E L Sbjct: 241 TFSPEKEELKPLEKVSTPDCATIEQLSEFLHVP 273 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 95/193 (49%), Gaps = 2/193 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A N D + IEVGHIF GT Y+ M+A F +GK Sbjct: 376 DFKVNEFADLRTANAGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTNSMNAKFLDQNGKTQ 435 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + MGSYGIG R+++A++E GI WP VAPF+I +I + + +K+ Sbjct: 436 PIIMGSYGIGVTRMLSAIVEQHSTDNGIFWPKEVAPFEIHIIQMNMKNDEQTVVSKKLEE 495 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 S DV +DD E+ G +F ADL+G P+++IVG + VS+ VE+K +MS Sbjct: 496 IFSDK-YDVLYDDRNERPGVKFNDADLIGAPIRIIVGRR-VSEQIVEVKKSTEQESVEMS 553 Query: 431 LEEVINYASHRFS 443 L+ + Y S Sbjct: 554 LDSLTEYISKELR 566 >gi|293364306|ref|ZP_06611032.1| proline--tRNA ligase [Streptococcus oralis ATCC 35037] gi|307702728|ref|ZP_07639680.1| prolyl-tRNA synthetase [Streptococcus oralis ATCC 35037] gi|291317152|gb|EFE57579.1| proline--tRNA ligase [Streptococcus oralis ATCC 35037] gi|307623844|gb|EFO02829.1| prolyl-tRNA synthetase [Streptococcus oralis ATCC 35037] Length = 617 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 105/257 (40%), Positives = 148/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L +V Sbjct: 241 QEEIKAELLKWMVSGED 257 Score = 146 bits (368), Expect = 8e-33, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E G+ +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGVNFPKELAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E+IG +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQTLTEKLEASLMGAGYEVLTDDRNERIGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ ++ ++ + + Sbjct: 593 IKATGDTIEVHVDNLLETL--EILSKK 617 >gi|126642843|ref|YP_001085827.1| prolyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978] Length = 546 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 115/228 (50%), Positives = 156/228 (68%), Gaps = 1/228 (0%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 MLR GMI + + G+Y+WLP+G + L V+AI+REE NR+GA+E+ +P Q A LW ESGR Sbjct: 1 MLRAGMIRKLASGLYTWLPMGTRVLKKVDAIVREEMNRSGAMEVFMPVTQPASLWEESGR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 Y+ YG E+LR DR+D + GPTHEEV+TD+ R+ +KSY+ LP FYQIQ KFRDE+RP Sbjct: 61 YEQYGPELLRFKDRHDNPFVLGPTHEEVITDLARNELKSYKQLPVNFYQIQTKFRDEIRP 120 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 RFGVMRSREF+MKDAYSF T E + +Y+ M+ +Y RIF RLGL P++A++G IGG Sbjct: 121 RFGVMRSREFIMKDAYSFHATQESLQETYDVMYDTYSRIFTRLGLDFRPVQADTGSIGGS 180 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT 253 SHEF VLA +GE + D+ E + + + +++ Sbjct: 181 ASHEFHVLAASGEDDIAF-STESDYAANVEMAEAVLVGERAAPTQEFK 227 Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats. Identities = 73/192 (38%), Positives = 104/192 (54%), Gaps = 3/192 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 + A D+ N D P+ K RGIEVGHIF GTKYS + G DGK Sbjct: 354 ERDAQITEVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGTKYSEALGCKVLGEDGK 413 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEK 367 V MG YGIG RVVAA IE ++D KGIIWP ++APF+I+++ + A +A E Sbjct: 414 PFTVTMGCYGIGVTRVVAAAIEQNYDDKGIIWPQAIAPFEIAIVPMNAHKSPRTLEAAEA 473 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 +YA L G DV DD E+ G +F+ +L+G P ++++G K + E K R Sbjct: 474 LYAELQAQGFDVLLDDRNERPGVKFSDLELMGIPHRIVIGEKGLDAGTFEYKGRRDAEAS 533 Query: 428 DMSLEEVINYAS 439 +++ EE++ + Sbjct: 534 NLTKEELLAKLA 545 >gi|187736219|ref|YP_001878331.1| threonyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835] gi|187426271|gb|ACD05550.1| threonyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835] Length = 630 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 78/463 (16%), Positives = 150/463 (32%), Gaps = 59/463 (12%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIE 68 + + RD +L L + +G+ W P G ++ I EE ++ G + Sbjct: 195 RLEEARRRDHRKLGRELGLF-CIDESVGQGLILWKPKGALIRRSLQDFITEELDKLGYSQ 253 Query: 69 MSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA------------------------M 104 + P + DL+ SG + Y + D Sbjct: 254 VYTPNIGKLDLYRTSGHFPYYQESQYAPIPERDAMEKLSQEGASCAELFNGLATGTIEGY 313 Query: 105 IYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSF 163 + P + I+ + SYR+LP + +R E G+ R R F DA+ F Sbjct: 314 MLKPMNCPHHIKIYANDAHSYRDLPVRLAEFGTVYRWEQSGELGGMTRVRGFTQDDAHIF 373 Query: 164 DLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFC 223 + + + IF LG+ +R + D + Sbjct: 374 CTPDQLAGE-IRQCLGIVKTIFGTLGMTDYRVRLS--------------MRDPESDKYVG 418 Query: 224 SKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 S + D + + + + S A Y D + D++ ++ ++ Sbjct: 419 SPENWDKAEQALREAAEWLGADYSEEAGEAAFYGPKIDFI---VRDAIGREWQLGTVQVD 475 Query: 284 VGHIFYFGTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 + GAD K H + G+M ++ +GK W Sbjct: 476 YNLP--------ERFDLHYTGADNKPHRPVMVHRAPFGSMERFTGLLIEHFEGKFPTW-- 525 Query: 343 SVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPL 402 ++P ++ ++ I D L+ G V D+ ++IG++ A L P Sbjct: 526 -LSPEQVRVLPISDK---VTDVAAAHRTALAARGVRVTVDETPDKIGAKIRNARLDRVPY 581 Query: 403 QVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 +++G + D V ++HR G M E+ + + + Sbjct: 582 MLVLGQREAEDGTVSVRHRDKGDLGAMPFEQFADLVAREIAER 624 >gi|50550793|ref|XP_502869.1| YALI0D15620p [Yarrowia lipolytica] gi|49648737|emb|CAG81057.1| YALI0D15620p [Yarrowia lipolytica] Length = 445 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 142/456 (31%), Positives = 214/456 (46%), Gaps = 50/456 (10%) Query: 2 RRSKYFLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 R S+ L++ P + L+ TG + S G+ + LPLG + + IIR E Sbjct: 4 RLSRLTTRRLKDVTPS---TTASDLLAVTGYVSYPSSGLANLLPLGLRVQRKIENIIRSE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+S+ DLW ++GR ++ E+ R+ D ++ I PTHEE +T++ Sbjct: 61 LDSIGCAEVSLSNFSDPDLWRKTGRINN--GELFRVNDGSEDPPIIAPTHEEEITNLIAQ 118 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I S ++LP +YQI K+R+E RPR G++R +EF MKD YSFD+ + SY+ + + Sbjct: 119 KISSPKDLPILWYQIGKKYRNEARPRGGLLRGKEFTMKDLYSFDVDEPRALESYDLVRKA 178 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPSENTDF 239 Y +IF +LG+ + A+SG IGG SHE+ V+ +GE + CS I Sbjct: 179 YDQIFGKLGVPVKSVAADSGAIGGSHSHEYHVIDASGEDTLVTCSSCDYSANIEVAERAA 238 Query: 240 DDIISLNSIVEQWTAPY------------------------------AATSDVHNEKLFD 269 D ++ + V + + ++ K D Sbjct: 239 GDSETICTEVNGVLVTHESSHAVNPRLVDRALSSYGHDAYKISMLRDGVSHNLTTPKEGD 298 Query: 270 SLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 S P + IEVGH FY GTKYS +S FK ++ K MG YGIG R+VAA Sbjct: 299 SCPNCTSSLKFSNAIEVGHTFYLGTKYSKSLSCDFKNSENKLTPAFMGCYGIGITRLVAA 358 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVGCDVFWDDM-G 385 + E S D G+ WP +VAP++ +I + D ++ A L D DD Sbjct: 359 IAEVSRDQHGLKWPSNVAPYETVVILGGGATESTLLDKASELGALLQ----DAVIDDRPK 414 Query: 386 EQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 IG + A L+GFP V+V D +E+ HR Sbjct: 415 RSIGWKINEAKLMGFPQVVVV----KKDG-IEVIHR 445 >gi|282898730|ref|ZP_06306717.1| Threonyl-tRNA synthetase, class IIa [Cylindrospermopsis raciborskii CS-505] gi|281196257|gb|EFA71167.1| Threonyl-tRNA synthetase, class IIa [Cylindrospermopsis raciborskii CS-505] Length = 610 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 70/442 (15%), Positives = 150/442 (33%), Gaps = 39/442 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD +L L G+ W P G + +++EQ + G + + Sbjct: 198 EEALRRDHRKIGKELGLFI-FSDPVGPGLPLWTPKGTLLRSILEDFLKKEQLKRGYLPVV 256 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKA------MIYGPTHEEVMTDIFRSHIKS 124 P + DL+ SG + Y ++M + N+++ + P + I++S ++S Sbjct: 257 TPHIARVDLFKTSGHWQKYKEDMFPMMAENEESKALDQGFVLKPMNCPFHIQIYKSELRS 316 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR LP + +R E G + D +TPE + + L + Sbjct: 317 YRELPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPEQLDEEFLNVVDLILTV 376 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 F RL LK+ R D + + D + + Sbjct: 377 FRRLQLKNFKARLS--------------FRDPTSDKYIGGDEVWDKAEGAIRRAVQQLGM 422 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y D D L ++ ++ + Sbjct: 423 DHFEGIGEAAFYGPKLDFI---FSDVLEREWQLGTVQVDYNLP--------ERFDLEYVA 471 Query: 305 ADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 DG + G++ + ++ + +P +AP +I L+ + + + Sbjct: 472 EDGSRKRPVMIHRAPFGSLERLIGILI---EEYAGDFPLWLAPIQIRLLPVG---EQQIE 525 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +++ +++++G D G+++ + P+ +VG+K V + + I+ R + Sbjct: 526 FTKEVAGKMTELGIRAQADLSGDRLAKLIRNGEKDKIPVMAVVGAKEVESNSLSIRTRAS 585 Query: 424 GIREDMSLEEVINYASHRFSNN 445 G + +E+V+ N Sbjct: 586 GELGVIPVEKVVEKMQDSIINY 607 >gi|225350874|ref|ZP_03741897.1| hypothetical protein BIFPSEUDO_02448 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158330|gb|EEG71572.1| hypothetical protein BIFPSEUDO_02448 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 611 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 119/427 (27%), Positives = 180/427 (42%), Gaps = 20/427 (4%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DA++ S KL+ R + + + GI++WLPLG L+ + IIREE Sbjct: 6 RMSTMFLRTLREDPADADVVSDKLLQRACYLRKAAPGIWTWLPLGLNVLNKIENIIREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 A E+ L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 66 ASIDAQEVHFSGLLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDL 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF L EG +Y +Y Sbjct: 126 YSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTLDKEGLVKAYMDERGAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF+RL LK +P+ A +GP+GG S EF+ + GE S + + + T + Sbjct: 186 ERIFNRLDLKYVPVHAMAGPMGGFESEEFLAPMEIGEDTFAQSPSGKAWNVEALTTPEPE 245 Query: 242 II--SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEV-------GHIFYFGT 292 I S E+ P A T D E + P + + ++ Sbjct: 246 AIDFSNTPAAEKRPTPNAETIDQMVEFANANHPRSDGRAWEASDILKNVVIAVMHPQDDE 305 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 G G + A E ++ Sbjct: 306 HDEPWRELVVVGVPGDRTVDMKRLEAQFTPAEIEEATDEDLKKHPELVKGYIGPMAFGPQ 365 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQ-VIVGSKF 410 + + E + D + + F AD G ++ G F Sbjct: 366 ARGGEKAENANETGEAL---------RYLIDAHIARGSAWFTGADEAGVDYYDLVYGRDF 416 Query: 411 VSDSKVE 417 +D VE Sbjct: 417 EADGVVE 423 Score = 139 bits (350), Expect = 9e-31, Method: Composition-based stats. Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 2/173 (1%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 RG+E+G +F G KYS + +GK V MGSYGIG RV+A + E+ Sbjct: 436 GSGPLSFERGVEIGQVFQLGLKYSNALGLKVLDQNGKTVPVWMGSYGIGVSRVMACIAET 495 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGS 390 HD KG+ W ++ + D +A E++ A L G +V +DD + G Sbjct: 496 HHDEKGLAW-PAIIAPAQVHVVATGKDAAAFEAAEQLIADLEAKGIEVIFDDRKKVSPGV 554 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 +F A+L+G PL + G V++ +E++ R E + + + + R + Sbjct: 555 KFKDAELIGVPLIAVAGRDTVNNGTIEVRDRNGENAEAVPVADAARVIADRVA 607 >gi|66821029|ref|XP_644046.1| threonyl-tRNA synthetase [Dictyostelium discoideum AX4] gi|75016778|sp|Q8MP20|SYTC2_DICDI RecName: Full=Probable threonyl-tRNA synthetase 2, cytoplasmic; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|21240667|gb|AAM44378.1| hypothetical protein [Dictyostelium discoideum] gi|60472212|gb|EAL70165.1| threonyl-tRNA synthetase [Dictyostelium discoideum AX4] Length = 698 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 67/435 (15%), Positives = 139/435 (31%), Gaps = 35/435 (8%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD + L H S G +LP G K + + +R E + G E+ P + Sbjct: 281 RDHRVIGKDQELF--FFHPFSPGSCFFLPHGTKIYNKLLQFLRLEYRKRGYQEVISPNIY 338 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + LW SG +D+Y M + + P + ++ +SY+ LP Sbjct: 339 NQKLWETSGHWDNYKDNMFSF-ECDHTQYSLKPMNCPGHCLMYAHRARSYKELPMRIADF 397 Query: 136 QLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIP 194 + R+E G+ R R F DA+ F TP+ + + ++ Sbjct: 398 GVLHRNETHGSLSGLTRVRRFQQDDAHIFC-TPDMIREEIKQCLDFMKYVYTIFNFTF-H 455 Query: 195 MRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTA 254 + + P A+T +QV +I A Sbjct: 456 LELSTRPDSYLGELSVWEKAETSLSQVLTEFC----------------GDKWTINHGDGA 499 Query: 255 PYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS-----LPMSATFKGADGKD 309 Y D+H L D+ +N + + ++ F +YS + + Sbjct: 500 FYGPKIDIH---LKDANGKNHQCATIQLDFQLPIRFNLEYSGGLNNNNNNNNNNEEINDN 556 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP-DSVAPFKISLINIKAHDQVCRDACEKI 368 + + + R + +E + ++I Sbjct: 557 NNNNSLNRPVMIHRALFGSVERMMAILMEHTAGKWPFWLSPRQCIVIPVSNKFNQFAQEI 616 Query: 369 YARLSKVGCDVFWDDMGEQ-IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL---TG 424 ++++ G DV D + + + A + + ++VG + + + + ++ R Sbjct: 617 QSKINLAGYDVDVDLNDSKLLSKKIREATVSQYNYIIVVGQEEIDTNILNVRKRDLPEDN 676 Query: 425 IREDMSLEEVINYAS 439 + +SL ++ + Sbjct: 677 KQVKLSLNDLFSEFK 691 >gi|154148423|ref|YP_001406459.1| prolyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381] gi|166980113|sp|A7I1R8|SYP_CAMHC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|153804432|gb|ABS51439.1| prolyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381] Length = 569 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 101/260 (38%), Positives = 150/260 (57%), Gaps = 1/260 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK+F P L+E P+DA + SH ++R G I Q G+Y++LPLG+ ++ + A+I++E Sbjct: 1 MKFSKFFAPTLKEAPKDAILPSHVFLIRAGFIEQLGSGLYNFLPLGEMVIEKIKAVIKDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++TGA++++ + ++ W ESGRY+ YGKE+LR+ DR + + PT+EE + + Sbjct: 61 MDKTGALQVNFSFVTPSEFWQESGRYNVYGKELLRIKDRKENGFVLSPTNEESSVKMIAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI KFRDE RPRFG++R REF+MKD YSF E K ++ M + Sbjct: 121 KITSYKQLPIHIYQINTKFRDEARPRFGLLRGREFIMKDGYSFHANMEDLKREFDVMEKT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQV-FCSKDFMDFPIPSENTDF 239 Y IF RLGL + A+SG IGG S EF+VLA GE + C I + Sbjct: 181 YTNIFSRLGLNFRAVEADSGAIGGSGSKEFMVLAQNGEDDILVCESCKYAANIEAAVRVK 240 Query: 240 DDIISLNSIVEQWTAPYAAT 259 + E+ + Sbjct: 241 REAPCAAPETEKMQKFHTPN 260 Score = 146 bits (368), Expect = 8e-33, Method: Composition-based stats. Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 6/223 (2%) Query: 225 KDFMDFPIPSENTDFDDIISLNSIVEQWTA---PYAATSDVHNEKLFDSLPEN--KRVSA 279 ++D + +E + + + D+ + D P+ K Sbjct: 347 NFYIDKELKNERNLIVGANEKDYHIVGFAVTNFKDERFVDLSQVRAGDCCPKCGAKLDIK 406 Query: 280 RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGII 339 +GIEVGHIF G KYS M+A F +GK MG YGIG R++A +IE+ HD KG I Sbjct: 407 KGIEVGHIFQLGQKYSKAMNAIFLDENGKAVPFFMGCYGIGVSRLLAVMIEAGHDEKGCI 466 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W APFK+ +I + D+ + ++Y + G DD E+ G + +L+G Sbjct: 467 WNTQTAPFKLEIIISNSKDEDASNFAIQLYEKCKNAGISTLLDDRKERFGVKMNDFELIG 526 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 FP V+VG K + D VE+ R ++ +S E+ Sbjct: 527 FPFAVLVG-KGLKDGNVELIERKGLNKKIVSSGEIFETLKGIL 568 >gi|296228691|ref|XP_002759919.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 1 [Callithrix jacchus] Length = 718 Score = 201 bits (510), Expect = 3e-49, Method: Composition-based stats. Identities = 85/457 (18%), Positives = 145/457 (31%), Gaps = 57/457 (12%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + +D + L H+ S G +LP G + + + A IR E R G E+ Sbjct: 294 REKAGLQDHRRIGKEQELF--FFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFFEV 351 Query: 70 SVPTLQSADLWVESGRYDSYGKEML----------------RLADRNDKAMIYGPTHEEV 113 PTL S LW +SG ++ Y ++M + P + Sbjct: 352 KTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPASSQSDHSTRHTTDTLALKPMNCPA 411 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 +F +S+R LP R E G+ R R F DA+ F T + Sbjct: 412 HCLMFAHRPRSWRELPLRLADFGALHRAEASGGLCGLTRLRCFQQDDAHIFCTTDQLEAE 471 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 ++ LG + P G D Sbjct: 472 -IQSCLDFLRSVYAVLGFSFRLA-LSTRPSGF-----------------LGDPCLWDQAE 512 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y DVH L D+L + ++ F Sbjct: 513 QVLQQALKEFGEPWDLNSGDGAFYGPKIDVH---LHDALGRPHQCGTIQLD----FQLPL 565 Query: 293 KYSLPMSATFKGADGK-DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 ++ +KG G + V + +G++ + V+ + WP ++PF++ + Sbjct: 566 RFD----LQYKGQAGALERPVLIHRAVLGSVERLLGVLA---ESCRGKWPLWLSPFQVVV 618 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKF 410 I + + + + L G D D + + A L + Q +VG K Sbjct: 619 IPVGTEQE---EYARETQQSLQAAGLVCDLDADSRLTLSRRIRRAQLAHYNFQFVVGQKE 675 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 S S V I+ R + + SL E + + P Sbjct: 676 QSKSTVNIRTRDNRLLGEWSLPEAVQRLVVLQNTRVP 712 >gi|15827147|ref|NP_301410.1| threonyl-tRNA synthetase [Mycobacterium leprae TN] gi|221229625|ref|YP_002503041.1| threonyl-tRNA synthetase [Mycobacterium leprae Br4923] gi|2501058|sp|O07151|SYT_MYCLE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783529|sp|B8ZUG9|SYT_MYCLB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|2193902|emb|CAB09620.1| ThrS [Mycobacterium leprae] gi|13092695|emb|CAC29964.1| threonyl-tRNA synthetase [Mycobacterium leprae] gi|219932732|emb|CAR70549.1| threonyl-tRNA synthetase [Mycobacterium leprae Br4923] Length = 702 Score = 201 bits (510), Expect = 3e-49, Method: Composition-based stats. Identities = 64/443 (14%), Positives = 142/443 (32%), Gaps = 49/443 (11%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 I + RD +L L + + G+ + P G + R + G + Sbjct: 272 ITEAQRRDHRKLGIELDLFS-FPDEIGSGLAIFHPKGSIVRREMEEYSRRKHIEAGYQFV 330 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDI 117 + P + A L+ SG D Y + + + + P + + T I Sbjct: 331 NTPHITKAQLFHTSGHLDWYAEGIFPPMHLDAEHNDDGTVRKPGQDYYLKPMNCPMHTLI 390 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 F S +SYR LP ++ +R E G+ R+R F M D++ F + Sbjct: 391 FSSRGRSYRELPLRLFEFGTIYRYEKSGVVHGLTRARGFTMDDSHIFCTREQLHCEL-AS 449 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + L + GL+ + + + S++ + + Sbjct: 450 LLRFVLDLLGDYGLEDFYLELST----------------KDPEKFVGSEEIWEEATAALA 493 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 ++ A Y + ++ D+L + ++S ++ F F +++ Sbjct: 494 EVAENSTLPLVPDPGGAAFYGPKI---SVQVRDALGRSWQMSTIQVD----FNFPERFA- 545 Query: 297 PMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 + ADG + G++ ++ + +P +AP ++ I + Sbjct: 546 ---LEYTSADGTRQRPVMIHRALFGSIERFFGILT---EHYAGAFPAWLAPIQVVGIPVT 599 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 E++ A+L G D +++ + P ++ G + V Sbjct: 600 G---EHVSYLEEVAAQLKSCGVRTEVDVSDDRMAKKIVRHTNQKVPFMLLAGDRDVRTGS 656 Query: 416 VEIKHRLTGIREDMSLEEVINYA 438 V + ++ + + Sbjct: 657 VSFRFGDRTQINGVARDSAVEAI 679 >gi|313904501|ref|ZP_07837877.1| threonyl-tRNA synthetase [Eubacterium cellulosolvens 6] gi|313470643|gb|EFR65969.1| threonyl-tRNA synthetase [Eubacterium cellulosolvens 6] Length = 591 Score = 201 bits (510), Expect = 3e-49, Method: Composition-based stats. Identities = 77/439 (17%), Positives = 141/439 (32%), Gaps = 45/439 (10%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 F L+E RD + + L M + + G+ WLP G K +++ + R G Sbjct: 173 FKKFLREAAERDHKKLGPQQELF--MFDETAPGMPYWLPRGWKLFNSLLSFWRGIHEEHG 230 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA---MIYGPTHEEVMTDIFRSHI 122 E+S P L ++ LW SG + Y M + + P + +++S + Sbjct: 231 YQEISGPILSNSKLWQTSGHWGHYKDNMFIIPGEKEDESDYYAAKPMNCPNAILVYKSRL 290 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR+LPF Q+ R E G+ R + F DA+ + + Sbjct: 291 RSYRDLPFRVAQVDNIHRKEKSGELNGLFRVQMFRQDDAHILVTEDQIADE--------I 342 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I G +F+ D S +D Sbjct: 343 KDIMSIATQIYGTFGLSYGAELSTRPDDFM-----------GDIAVWDKAEASLKEILND 391 Query: 242 I--ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + E A Y D+ K+ D+L ++ ++ F + + + Sbjct: 392 VYGEGNYEVNEGDGAFYGPKIDL---KMKDALGREWQMGTIQLD----FQLPLNFDMKYA 444 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A + K + + R + +IE+ Sbjct: 445 A--QDGTVKQPVMIHRAIFGSLERFIGILIENYKASFPFWLSPYQVGVVPIRT------- 495 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + +K+ L G V D + + + P ++VG K S+ V I Sbjct: 496 EHNEYAKKVVDALKAAGIRVEVDYADKNMNEKIKAFKTYHDPYIIVVGDKEASEGTVSIT 555 Query: 420 HRLTGIR-EDMSLEEVINY 437 R + D+SLE+++ Sbjct: 556 VRGQKQQLHDVSLEKLVEM 574 >gi|212716449|ref|ZP_03324577.1| hypothetical protein BIFCAT_01373 [Bifidobacterium catenulatum DSM 16992] gi|212660702|gb|EEB21277.1| hypothetical protein BIFCAT_01373 [Bifidobacterium catenulatum DSM 16992] Length = 611 Score = 201 bits (510), Expect = 3e-49, Method: Composition-based stats. Identities = 118/427 (27%), Positives = 183/427 (42%), Gaps = 20/427 (4%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DA++ S KL+ R + + + GI++WLPLG L+ + IIREE Sbjct: 6 RMSTMFLRTLREDPADADVVSDKLLQRACYLRKAAPGIWTWLPLGLNVLNKIENIIREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 A E+ L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 66 ASIDAQEVHFSGLLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDL 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF L EG +Y +Y Sbjct: 126 YSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTLDKEGLVKAYMDERGAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF+RL LK +P+ A +GP+GG S EF+ + GE S + + + T + Sbjct: 186 ERIFNRLDLKYVPVHAMAGPMGGFESEEFLAPMEIGEDTFAQSPSGKAWNVEALTTPEPE 245 Query: 242 IISLNSI--VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE------VGHIFYFGTK 293 I ++ E+ P A T D E + P + + + + + Sbjct: 246 AIDFSNTPAAEKRPTPNAETIDQMVEFANANHPRSDGRAWEASDILKNVVIAVMHPQDDD 305 Query: 294 YSL-PMSATFKGADGKDHYVQMGSYG-IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + G G + A E ++ Sbjct: 306 HDEPWRELVVVGVPGDRTVDMKRLEAQFTPAEIEEATDEDLKKHPELVKGYIGPMAFGPQ 365 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQ-VIVGSKF 410 + + E + D + + F AD G ++ G F Sbjct: 366 ARGGEKAENANETGEAL---------RYLIDAHIARGSAWFTGADEAGVDYYDLVYGRDF 416 Query: 411 VSDSKVE 417 +D VE Sbjct: 417 EADGVVE 423 Score = 142 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 2/173 (1%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 RG+E+G +F G KYS + +GK V MGSYGIG RV+A + E+ Sbjct: 436 GSGPLSFERGVEIGQVFQLGLKYSNALGLKVLDQNGKTVPVWMGSYGIGVSRVMACIAET 495 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGE-QIGS 390 HD KG+ W ++ + D +A E++ A L G +V +DD + G Sbjct: 496 HHDEKGLAW-PAIIAPAQVHVVATGKDAAAFEAAERLIAELEAKGIEVIFDDRKKVSPGV 554 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 +F A+L+G PL + G V++ +E++ R E + + + + R + Sbjct: 555 KFKDAELIGVPLIAVAGRDTVNNGTIEVRDRNGENAEAVPVADAAQMIAERVA 607 >gi|259501582|ref|ZP_05744484.1| proline-tRNA ligase [Lactobacillus iners DSM 13335] gi|259167100|gb|EEW51595.1| proline-tRNA ligase [Lactobacillus iners DSM 13335] Length = 581 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 109/273 (39%), Positives = 144/273 (52%), Gaps = 3/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR+S F+P L+E P DA SH+LMLR G I Q + G+Y++LPL L II EE Sbjct: 16 MRQSILFIPTLKEVPSDAVAKSHQLMLRGGYIRQVTAGVYAYLPLAYLVLRKAEKIIEEE 75 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 EM +P A LW ESGR YG EM RL DR+ + + GPTHEE T+I Sbjct: 76 MENINVPEMIMPHFLPATLWEESGRLPKYGPEMFRLKDRHGRESLLGPTHEETFTEIIGK 135 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +IKSY+ +P YQIQ KFRDE RPRFG++R REF+M D YSF T E ++ + Sbjct: 136 NIKSYKQMPIALYQIQTKFRDENRPRFGLLRGREFVMLDGYSFAATREQLDKQFDDQKHA 195 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R G++ P+ A SG +GG S EF A GE + ++ D Sbjct: 196 YKKIFKRCGVEVYPVIANSGTMGGKNSTEFQAPAAIGEDVIATNETGTYSANLEMARSID 255 Query: 241 DI---ISLNSIVEQWTAPYAATSDVHNEKLFDS 270 +E+ + P AT + +E L Sbjct: 256 TFSPEKEELKPLEKVSTPDCATIEQLSEFLHVP 288 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 95/193 (49%), Gaps = 2/193 (1%) Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A N D + IEVGHIF GT Y+ M+A F +GK Sbjct: 391 DFKVNEFADLRTANAGEPDPVDHLPLKFTTSIEVGHIFKLGTYYTNSMNAKFLDQNGKTQ 450 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + MGSYGIG R+++A++E GI WP VAPF+I +I + + +K+ Sbjct: 451 PIIMGSYGIGVTRMLSAIVEQHSTDNGIFWPKEVAPFEIHIIQMNMKNDEQTVVSKKLEE 510 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 S DV +DD E+ G +F ADL+G P+++IVG + VS+ VE+K +MS Sbjct: 511 IFSDK-YDVLYDDRNERPGVKFNDADLIGAPIRIIVGRR-VSEQIVEVKKSTEQESVEMS 568 Query: 431 LEEVINYASHRFS 443 L+ + Y S Sbjct: 569 LDSLTEYISKELR 581 >gi|26553728|ref|NP_757662.1| threonyl-tRNA synthetase [Mycoplasma penetrans HF-2] gi|26453735|dbj|BAC44066.1| threonyl-tRNA synthetase [Mycoplasma penetrans HF-2] Length = 566 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 59/437 (13%), Positives = 141/437 (32%), Gaps = 33/437 (7%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD + + + +G+ WLP G+ + + ++ + + Sbjct: 161 MEEIKSRDHRKIGQDMEIF-DFSNDIGQGLPIWLPNGEIIKKEIKKFLWSIFSKEKFLFI 219 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P L S +L+++SG ++ Y + + +++ + P F SY+ LP Sbjct: 220 DTPILGSKELYIKSGHWEHYKENNFPPMEVDNETFMLRPMTCPHHLTYFNLKPHSYKELP 279 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 + + R E G+ R R + D + P+ + ++ + R+ Sbjct: 280 YAICEDSKLHRYESSGGLIGLERVRTMELFDCHII-TKPDQIEDVIRQLNNILKIVHKRM 338 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 +K + + + + Sbjct: 339 NIKIDRVDLSLRD-------------PKDKVKYHDDDKMWKSSEKQLRDILKKLNYKAME 385 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 +E A Y D ++ +L + +S ++ F ++ + + Sbjct: 386 IEGEAAFYGPKIDF---QVKTNLGKIITISTIQLD----FLLPERFD----VEYIDENNT 434 Query: 309 DHYVQMGSYG-IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEK 367 + +G IG A + S G W + + I ++ + D C+K Sbjct: 435 KKRPVLIHFGVIGTYERFIATLLSQTKGLLPFWLA-----PVQISIIPVNNNIHLDYCKK 489 Query: 368 IYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 I + L + V DD E++ + A + P Q+++G + ++++ + Sbjct: 490 IASELEENNIRVKLDDSNERLAKKIREAQISKIPFQLVIGDNEIKNNEITYRKYSEENST 549 Query: 428 DMSLEEVINYASHRFSN 444 + E I++ Sbjct: 550 TLKFNEFIDFIKKLKKE 566 >gi|330836102|ref|YP_004410743.1| Prolyl-tRNA synthetase [Spirochaeta coccoides DSM 17374] gi|329748005|gb|AEC01361.1| Prolyl-tRNA synthetase [Spirochaeta coccoides DSM 17374] Length = 586 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 94/262 (35%), Positives = 141/262 (53%), Gaps = 1/262 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S F L+E P A+ ++L+LR G I Q GI++ LPLG +++ + +IIR+E Sbjct: 1 MRMSALFSKTLREAPSGADAKGYELLLRAGFIRQLGAGIFTMLPLGYRSVKKIESIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ +P + AD+W +GRY S KEM R DR + M+ THEE +TD+ + Sbjct: 61 MDAIGGQEILMPVVNPADIWKSTGRYYSIDKEMSRFQDRVGRDMVLAMTHEEAVTDVAKG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQ+Q K+RD+ RPR G++R REF MKD+YSFD G + Y + + Sbjct: 121 EIDSYKRLPQLVYQLQTKWRDDPRPRAGLIRVREFTMKDSYSFDRDQAGMEKQYRAHYSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y RIF GL + ++SG +GG ++HE++ L+ GE + T Sbjct: 181 YFRIFGHAGLPVTVVGSDSGMMGGKIAHEYMYLSPVGEDTIITCPGCGYTANRQVATFKK 240 Query: 241 D-IISLNSIVEQWTAPYAATSD 261 ++ P A T + Sbjct: 241 TFFPEAPRPRKEVETPEARTIE 262 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 18/224 (8%) Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYF 290 + + +D+ + P ++G+EVG+IF Sbjct: 361 NNLVAGANKPGCHYVDTNHGVDYSGTVADIASAAAGHGCPVCGEPLCVSKGVEVGNIFQL 420 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 GT+YS M ++ DG V MGSYGIG R++A + E HD G+ P +VAP+++ Sbjct: 421 GTRYSEAMGCLYQDEDGVRKPVIMGSYGIGVGRMLACLAEEYHDDSGLALPVTVAPYQVH 480 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 L+++ +Q + IY RL+ G +V +DD E G +FA ADLLG P+++ VG++ Sbjct: 481 LVSLVKDEQ----VGDTIYGRLTHAGIEVLYDDRKESAGVKFADADLLGMPIRITVGNRS 536 Query: 411 VSDSKVEIKHR-----------LTGIREDMSLEEVINY-ASHRF 442 + + KVE+K R +E ++L + + + Sbjct: 537 LKEGKVEVKLRSQPDEIHTFDLADLEKEIIALADSMEKNLKEKI 580 >gi|46108732|ref|XP_381424.1| hypothetical protein FG01248.1 [Gibberella zeae PH-1] Length = 745 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 67/448 (14%), Positives = 135/448 (30%), Gaps = 41/448 (9%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + R+ + + S G +LP G + + + +I+ E + E+ Sbjct: 319 EAAKRNHRKIGQ--DQKLFFFDEASPGSAFFLPHGVRIYNALMDLIKGEYQKRDFEEVMS 376 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + ADLW SG + Y + M +K P + IF +Y++LP+ Sbjct: 377 PNMYKADLWKTSGHWGHYEENMFTFEVEKEK-FGLKPMNCPGHCKIFAHSDVTYKDLPWR 435 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 R+E G+ R R F DA+ F + + F ++ G Sbjct: 436 MADFGTLHRNEFSGALSGLTRVRRFQQDDAHIFCTVDQIREE-IESAFDFLSSVYGIFGF 494 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 ++ + P I D E ++ + + + + Sbjct: 495 TF-KLKLSTRPEKYVGD---IATWDAAEKKL----------EEALESFAEKTGAKWEFNP 540 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY---------SLPMSAT 301 A Y D+ LFD+L + ++ F +Y S + Sbjct: 541 GDGAFYGPKIDI---ALFDALKREHQCGTMQLDFNLPRRFKLRYVANKGETGVSDGSNPE 597 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G V + +G+ + ++ GK W + ++ Sbjct: 598 EDLPAGYARPVMIHRAVLGSFERMFGILTEHFGGKWPFWLSPRQVLVVPVMP------AA 651 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D +++ G D + L F +VG++ + I++R Sbjct: 652 NDYAQEVQKIFKAKGLYSDVDLSSNTFQKKIRKGQLEQFNFIFVVGAEEKESRTLNIRNR 711 Query: 422 LTGIR----EDMSLEEVINYASHRFSNN 445 E ++++E + Sbjct: 712 DDQSTQAKGELVAIDEALEKLLQLKDTR 739 >gi|323181612|gb|EFZ67027.1| prolyl-tRNA synthetase [Escherichia coli 1357] Length = 547 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 112/210 (53%), Positives = 147/210 (70%), Gaps = 1/210 (0%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 MLR GMI + + G+Y+WLP G + L V I+REE N GAIE+S+P +Q ADLW ESGR Sbjct: 1 MLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 ++ YG E+LR DR ++ + GPTHEEV+TD+ R+ + SY+ LP FYQIQ KFRDE+RP Sbjct: 61 WEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRP 120 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 RFGVMRSREFLMKDAYSF + E + +Y+ M+ +Y +IF R+GL ++A++G IGG Sbjct: 121 RFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGGS 180 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 SHEF VLA +GE V S D+ E Sbjct: 181 ASHEFQVLAQSGEDDVVFSDT-SDYAANIE 209 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 66/187 (35%), Positives = 112/187 (59%), Gaps = 3/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Y Sbjct: 360 ADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCY 419 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSKVG 376 GIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L G Sbjct: 420 GIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQG 479 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + +++ Sbjct: 480 IEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVE 539 Query: 437 YASHRFS 443 Y + Sbjct: 540 YLVKQIK 546 >gi|323176512|gb|EFZ62104.1| prolyl-tRNA synthetase [Escherichia coli 1180] Length = 547 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 112/210 (53%), Positives = 147/210 (70%), Gaps = 1/210 (0%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 MLR GMI + + G+Y+WLP G + L V I+REE N GAIE+S+P +Q ADLW ESGR Sbjct: 1 MLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 ++ YG E+LR DR ++ + GPTHEEV+TD+ R+ + SY+ LP FYQIQ KFRDE+RP Sbjct: 61 WEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRP 120 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 RFGVMRSREFLMKDAYSF + E + +Y+ M+ +Y +IF R+GL ++A++G IGG Sbjct: 121 RFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGGS 180 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 SHEF VLA +GE V S D+ E Sbjct: 181 ASHEFQVLAQSGEDDVVFSDT-SDYAANIE 209 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 67/189 (35%), Positives = 112/189 (59%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 358 EVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 417 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 418 CYGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 477 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++ Sbjct: 478 QGIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDI 537 Query: 435 INYASHRFS 443 I Y + Sbjct: 538 IEYLVKQIK 546 >gi|309787126|ref|ZP_07681738.1| prolyl-tRNA synthetase [Shigella dysenteriae 1617] gi|308924704|gb|EFP70199.1| prolyl-tRNA synthetase [Shigella dysenteriae 1617] Length = 547 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 112/210 (53%), Positives = 147/210 (70%), Gaps = 1/210 (0%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 MLR GMI + + G+Y+WLP G + L V I+REE N GAIE+S+P +Q ADLW ESGR Sbjct: 1 MLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 ++ YG E+LR DR ++ + GPTHEEV+TD+ R+ + SY+ LP FYQIQ KFRDE+RP Sbjct: 61 WEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRP 120 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 RFGVMRSREFLMKDAYSF + E + +Y+ M+ +Y +IF R+GL ++A++G IGG Sbjct: 121 RFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGGS 180 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 SHEF VLA +GE V S D+ E Sbjct: 181 ASHEFQVLAQSGEDDVVFSDT-SDYAANIE 209 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 112/189 (59%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 358 EVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 417 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 418 CYGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 477 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++ Sbjct: 478 QGIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDI 537 Query: 435 INYASHRFS 443 + Y + Sbjct: 538 VEYLVKQIK 546 >gi|312970296|ref|ZP_07784478.1| prolyl-tRNA synthetase [Escherichia coli 1827-70] gi|110613794|gb|ABF02461.1| proline tRNA synthetase [Shigella flexneri 5 str. 8401] gi|310337794|gb|EFQ02905.1| prolyl-tRNA synthetase [Escherichia coli 1827-70] gi|313646744|gb|EFS11203.1| prolyl-tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|323160236|gb|EFZ46194.1| prolyl-tRNA synthetase [Escherichia coli E128010] gi|332098769|gb|EGJ03729.1| prolyl-tRNA synthetase [Shigella boydii 3594-74] gi|332762199|gb|EGJ92468.1| prolyl-tRNA synthetase [Shigella flexneri 4343-70] Length = 547 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 112/210 (53%), Positives = 147/210 (70%), Gaps = 1/210 (0%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 MLR GMI + + G+Y+WLP G + L V I+REE N GAIE+S+P +Q ADLW ESGR Sbjct: 1 MLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 ++ YG E+LR DR ++ + GPTHEEV+TD+ R+ + SY+ LP FYQIQ KFRDE+RP Sbjct: 61 WEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRP 120 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 RFGVMRSREFLMKDAYSF + E + +Y+ M+ +Y +IF R+GL ++A++G IGG Sbjct: 121 RFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGGS 180 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 SHEF VLA +GE V S D+ E Sbjct: 181 ASHEFQVLAQSGEDDVVFSDT-SDYAANIE 209 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 112/189 (59%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D P+ + + RGIEVGHIF GTKYS + A+ +G DG++ + MG Sbjct: 358 EVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMG 417 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ-VCRDACEKIYARLSK 374 YGIG RVVAA IE ++D +GI+WPD++APF+++++ + H ++ EK+Y+ L Sbjct: 418 CYGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRA 477 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G FA +L+G P +++G + + + +E K+R G ++ + ++ Sbjct: 478 QGIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDI 537 Query: 435 INYASHRFS 443 + Y + Sbjct: 538 VEYLVKQIK 546 >gi|315054053|ref|XP_003176401.1| threonyl-tRNA synthetase [Arthroderma gypseum CBS 118893] gi|311338247|gb|EFQ97449.1| threonyl-tRNA synthetase [Arthroderma gypseum CBS 118893] Length = 765 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 77/477 (16%), Positives = 140/477 (29%), Gaps = 57/477 (11%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + + L L+E R+ + L + S G LP G K + + ++R E Sbjct: 309 KLLQEHLKFLEEAEKRNHLKIGKEQELF--FFDEVSPGCPFLLPNGTKIFNALQKLLRTE 366 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + +W +SG + Y +M +L D + P + +F Sbjct: 367 YRKRGYQEVQSPNMYDVGIWRQSGHWAHYKDDMFKL-DVEKRDWALKPMNCPGHCIMFGH 425 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SYR LP + R+E G+ R R+F D + F + +F Sbjct: 426 RERSYRELPLRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTDNQIIGE-IEGLFD 484 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 I+ G ++ + P + + DF Sbjct: 485 FLRAIYGLFGFSF-KLKLSTRP-----------------EKYLGKLETWDFAEAQLREAL 526 Query: 240 DDIISLNSIV-EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS--- 295 + E A Y D+ + D+L + + ++ F +Y Sbjct: 527 TKFKGAEWEIDEGDGAFYGPKIDI---TISDALKREHQCATIQLDYQLPLNFKLEYMTGE 583 Query: 296 ------------------LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 P + G + + A+I S G Sbjct: 584 TIPKSAAPAAPQAPQAEAKPEGGSNSSQAQPSDSSNPGPGRARPVMIHRAIIGSFERFFG 643 Query: 338 IIWPDSVAPFKISLIN----IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 I+ + L I D E++ L +V D G + + Sbjct: 644 ILIEHFGGKWPFWLSPRQILIVPVMASANDYVEELQEILRGDKLNVDIDLSGHTMQKKIR 703 Query: 394 VADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED----MSLEEVINYASHRFSNNR 446 L + +VG++ V I++R + + LEE R Sbjct: 704 NGQLAQYNFIFVVGAQEKESRSVNIRNRDDPSSQTKGSLVPLEEARAKLRALRKERR 760 >gi|84394652|ref|ZP_00993343.1| prolyl-tRNA synthetase [Vibrio splendidus 12B01] gi|84374725|gb|EAP91681.1| prolyl-tRNA synthetase [Vibrio splendidus 12B01] Length = 551 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 107/257 (41%), Positives = 153/257 (59%), Gaps = 5/257 (1%) Query: 21 ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLW 80 SH+LMLR GMI + + G+Y+WLP G + L V I+R+E + GA+E+ +P +Q +LW Sbjct: 1 ISHQLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVEILMPVVQPFELW 60 Query: 81 VESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFR 140 E+GR + G E+LR DR+ + + PT EEV+T + R+ I SY+ LP YQIQ KFR Sbjct: 61 EETGRSEKMGPELLRFTDRHSRPFVLSPTAEEVVTSLVRNEISSYKQLPLNLYQIQTKFR 120 Query: 141 DELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESG 200 DE RPRFGVMR+REF M DAYSFD+ EG + SY M +Y + F R+GL+ P+ A+SG Sbjct: 121 DERRPRFGVMRAREFSMMDAYSFDIDKEGLEKSYQAMHDAYCKAFDRMGLEYRPVLADSG 180 Query: 201 PIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN----TDFDDIISLNSIVEQWTAPY 256 IGG S EF VLA++GE + D+ E +++ + +E P Sbjct: 181 AIGGSGSQEFHVLAESGEDLIAF-SSESDYAANIEKAEALAPTEEVAAPTQEMELVDTPN 239 Query: 257 AATSDVHNEKLFDSLPE 273 A T E+ ++ + Sbjct: 240 AKTIAELVEQHGLAIEK 256 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 69/190 (36%), Positives = 109/190 (57%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFD--SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A D+ N D + RGIEVGHIF G YS M+ G DGK ++M Sbjct: 362 AQVEDLRNVIEGDLSPCGQGTIQLKRGIEVGHIFQLGNTYSKAMNCNVLGPDGKSVILEM 421 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVA+ IE +HD GI WPD++APF++++I + + ++A EK+YA L+ Sbjct: 422 GCYGIGVSRVVASAIEQNHDKFGITWPDALAPFQVAIIPMNMHKSERVKEAAEKLYAELT 481 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G +V +DD E+ G F +L+G P +++G + + + E K+R TG +E ++++ Sbjct: 482 AMGIEVLFDDRKERPGVMFKDIELVGIPHTIVIGDRSMDEGNFEYKNRRTGDKEVIAMDT 541 Query: 434 VINYASHRFS 443 VI + + + Sbjct: 542 VIEHLKAQLA 551 >gi|225155152|ref|ZP_03723647.1| threonyl-tRNA synthetase [Opitutaceae bacterium TAV2] gi|224804099|gb|EEG22327.1| threonyl-tRNA synthetase [Opitutaceae bacterium TAV2] Length = 646 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 77/496 (15%), Positives = 134/496 (27%), Gaps = 92/496 (18%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 FL ++ RD L L I + +G+ W P G + I EE + Sbjct: 170 FLERQEQAKLRDHRKLGRDLKLF--HIDEDVGQGLILWTPAGSVVRQELQNFISEELRKQ 227 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLA--------------------------- 97 G ++ P + L+ SG + Y Sbjct: 228 GYSQVFTPHIGKLALYKTSGHFPYYKDAQFPAIIEPDQLAQISAAGCSCADMTARLEAVS 287 Query: 98 ------------------DRNDKA-------MIYGPTHEEVMTDIFRSHIKSYRNLPFTF 132 DR + + P + IF S SYR+LP Sbjct: 288 PAFAAQLNERTGTAMIGADRINPDPTALLDGFLLKPMNCPHHIKIFASQPHSYRDLPVRL 347 Query: 133 YQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLK 191 + +R E G+ R R F DA+ F + ++ + LG+ Sbjct: 348 AEFGTVYRWEQSGELNGMTRVRGFTQDDAHLFCTEEQIAQE-IQGCLSLVKTVLSTLGMA 406 Query: 192 SIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQ 251 +R + L D + + + D + T + + Sbjct: 407 DYRVR--------------VGLRDPDSNKYTGAAENWDKAENACRTAAQTLGVPFTEEPG 452 Query: 252 WTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHY 311 A Y D + D + ++ ++ F ++ GAD + H Sbjct: 453 EAAFYGPKIDF---VIKDVIGREWQLGTVQVDYNLPVRFD--------LSYIGADNQPHR 501 Query: 312 VQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 M R +IE + EK+Y Sbjct: 502 PVMIHRAPFGSMERFCGVLIEHFAGDFPVWLAPEQVRILPI-------SDKVAAYSEKLY 554 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 L + G V D ++IG++ A+L P ++ G K + ++ R G M Sbjct: 555 NELREAGVRVVLDSDSDKIGAKLRRAELSKIPYMIVAGQKEAEAEAISVRSRAKGDEGVM 614 Query: 430 SLEEVINYASHRFSNN 445 + Sbjct: 615 PFADWKARLLEEIRTR 630 >gi|270292053|ref|ZP_06198268.1| proline--tRNA ligase [Streptococcus sp. M143] gi|270279581|gb|EFA25423.1| proline--tRNA ligase [Streptococcus sp. M143] Length = 617 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 105/257 (40%), Positives = 148/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDLTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L +V Sbjct: 241 QEEIKAELLKWMVSGED 257 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E G+ +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGVNFPKELAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L + G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEANLMEAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + ++ + + Sbjct: 593 IKATGDTIEVHADNLLETL--EILSKK 617 >gi|320102238|ref|YP_004177829.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Isosphaera pallida ATCC 43644] gi|319749520|gb|ADV61280.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Isosphaera pallida ATCC 43644] Length = 752 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 67/494 (13%), Positives = 128/494 (25%), Gaps = 75/494 (15%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHS-KGIYSWLPLGQKALDNVNAIIREEQNRTG 65 I + RD L L T I + G+ W+P G + +++E + G Sbjct: 253 LARIEEAKKRDHRRIGKDLHLFT--ISPLAGSGLVLWMPKGAMVRTILQQFLQDELLKRG 310 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGK-EMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 + P + +L+ SG Y Y + L +D A E + + Sbjct: 311 YQPVYTPHIGRVELYKTSGHYPYYSDSQFPTLKLLSDPAKRLVEAIESGEAMDDATACRL 370 Query: 125 YRNLPFTFYQIQLKFRD-------ELRPRFGVMRSREF-LMKDAYSFDLTPEGSKHSYNK 176 + E+ P RE + ++ + Y Sbjct: 371 LSEAGIPPVSVTPGSGSGGARSFTEMSPGERAAYVREHGVAEEYLLKPMNCPHHIEIYKA 430 Query: 177 MFVSYLRIFHRL-----------------------GLKSIPMRAESGPIGGDLSHEFI-- 211 SY + RL + + E + Sbjct: 431 QQRSYRDLPVRLAEFGTVYRYEQSGELSGLTRVRGFTQDDAHLFCTPEQVRSEFAETMRL 490 Query: 212 -----------------VLADTGETQVFCSKDFMDFPIPSE-NTDFDDIISLNSIVEQWT 253 +D + + + + ++ +D+ Sbjct: 491 TQFVLESLGLSDYRVRLSRSDPDDPKFQGADASIWLKAEADIRAVLEDLGLPYDEGIGEA 550 Query: 254 APYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 A Y +D + D L ++ ++ FG + G D H Sbjct: 551 AFYGPKADFL---VRDCLGRQWQLGTVQLDYVLPERFG--------LEYIGPDNAPHRPV 599 Query: 314 MGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 M R + +IE + + + Sbjct: 600 MIHRAPFGSMERFMGILIEHFAGAFPLWLAPEQVRVLPI-------SDKFNEYGRTVLHT 652 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSL 431 L + G D E+IG++ A L P+ ++VG+K V + R+ G R +SL Sbjct: 653 LRQAGLRAELDQRPEKIGAKIRDAQLEKIPVMLVVGAKEAETGTVSYRDRVDGDRGVVSL 712 Query: 432 EEVINYASHRFSNN 445 + + Sbjct: 713 ADAVASLRREVETR 726 >gi|149193855|ref|ZP_01870953.1| prolyl-tRNA synthetase [Caminibacter mediatlanticus TB-2] gi|149135808|gb|EDM24286.1| prolyl-tRNA synthetase [Caminibacter mediatlanticus TB-2] Length = 574 Score = 200 bits (509), Expect = 4e-49, Method: Composition-based stats. Identities = 111/288 (38%), Positives = 162/288 (56%), Gaps = 1/288 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F L+E P+DA SH ++R G I Q + GIY + PLG+ LDN+ II++E Sbjct: 1 MRFSRLFCYTLKEAPKDAVTPSHIYLIRGGYIKQVAAGIYDFAPLGKIVLDNIRDIIKKE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + +GA E+ + + +LW E+GR YG E+LR+ DR + PT+EE + D+ RS Sbjct: 61 MDNSGAQEVMLSFITPYELWEETGRAKKYGDELLRIEDRKGNKFVLSPTNEESIVDLVRS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++KSY+ LP YQI LKFRDE RPRFG++R REF+MKDAYSF E +N M + Sbjct: 121 YVKSYKQLPINLYQINLKFRDEARPRFGLLRGREFIMKDAYSFHKDEEDLDREFNLMEET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF ++GL + A+SG IGG S EF+VLA+TGE + + ++ E Sbjct: 181 YKKIFSKMGLDFRVVEADSGAIGGSGSKEFMVLANTGEDDIVVCSEC-NYAANIEVAKRK 239 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIF 288 I N I + + E++ + L + S + + IF Sbjct: 240 TIKKENPIKTETIEEVYTPNKKTIEEVCEFLGIDPYFSIKAVVKKAIF 287 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 72/221 (32%), Positives = 103/221 (46%), Gaps = 3/221 (1%) Query: 227 FMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEV 284 + + N I + D+ K D P+ +GIEV Sbjct: 355 MAEELVCGANKKDYHIKGAGLLDANLLGNLTIYRDIAAVKEGDLCPKCGKPLKITKGIEV 414 Query: 285 GHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSV 344 GHIF G YS PM+ATF +GK MG YGIG R++AA IE +HD KGIIWP + Sbjct: 415 GHIFKLGDVYSKPMNATFLDENGKAKPFIMGCYGIGVSRLIAAAIEQNHDDKGIIWPKEI 474 Query: 345 APFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQV 404 APF + +I + E +Y +L V DD E+ G + +LLGFP V Sbjct: 475 APFVVDIIIGDVKKENQVKFAENLYEKLKSENIKVLLDDRKERFGVKINDFELLGFPYAV 534 Query: 405 IVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 IVG K + D VEI+ R + + ++ +EV ++ + + Sbjct: 535 IVGKK-LKDGIVEIRDRRSDEKIEVKSDEVFDFLKEKLKKD 574 >gi|294655282|ref|XP_002770111.1| DEHA2B10252p [Debaryomyces hansenii CBS767] gi|199429831|emb|CAR65481.1| DEHA2B10252p [Debaryomyces hansenii] Length = 733 Score = 200 bits (509), Expect = 4e-49, Method: Composition-based stats. Identities = 78/448 (17%), Positives = 156/448 (34%), Gaps = 41/448 (9%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E RD + L T ++ S G WLP G + + + ++R+E + G Sbjct: 314 LKFLKEASERDHRRIGKEQELFT--FNEMSPGSAFWLPHGTRIYNTLTDLMRKEYRQRGY 371 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + ++ LW SG + +Y + M + P + +F+S +SYR Sbjct: 372 DEVITPNMYNSKLWETSGHWGNYKENMFSFEVEKET-FGLKPMNCPGHCLMFKSRERSYR 430 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP+ + R+EL G+ R R F DA+ F + +F +I+ Sbjct: 431 ELPWRVADFGVIHRNELSGALSGLTRVRRFQQDDAHIFCTQEQIESE-IGGVFDFLQKIY 489 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G + + P E A+ + NT Sbjct: 490 GVFGFEFKM-ELSTRPEKYVGDIETWNNAEANL-------------ENALNTFLG--KGK 533 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 + A Y D+ + D+L + + ++ F ++ L A Sbjct: 534 WELNPGDGAFYGPKIDIM---ISDALKRWFQCATIQLD----FQLPNRFELEYKAETNDK 586 Query: 306 DGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 V + +G++ + A++ + WP ++P +I ++ + + Sbjct: 587 SNTIGRPVMIHRAILGSVERMTAILT---EHYKGKWPFWLSPRQILVVPVGVK---YFEY 640 Query: 365 CEKIYARLSKV-GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL- 422 + + +L+K G D G + + + + IVG + V +++R Sbjct: 641 AQSLQNKLNKEYGFYADVDVSGNTLQKKVRTGQVYKYNFIFIVGEQEQEQQGVNVRNRDI 700 Query: 423 ---TGIREDMSLEEVINYASHRFSNNRP 447 G + + ++V+ R Sbjct: 701 QEEQGKNDMVKFDDVVQQLIKLREEMRQ 728 >gi|56417255|ref|YP_154329.1| threonyl-tRNA synthetase [Anaplasma marginale str. St. Maries] gi|73919765|sp|Q5P9F6|SYT_ANAMM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56388487|gb|AAV87074.1| threonyl-tRNA synthetase [Anaplasma marginale str. St. Maries] Length = 636 Score = 200 bits (509), Expect = 4e-49, Method: Composition-based stats. Identities = 75/438 (17%), Positives = 142/438 (32%), Gaps = 40/438 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 + Y + + RD + L I + G W G + IR + Sbjct: 230 LASYIHNMQEAEKRDHRKIAKDLGWF--HIQNEALGQVFWHDKGWVIYRIIEEYIRCKLK 287 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G E+ P + LW +SG ++ + + M + D + K + P + IF+S I Sbjct: 288 KHGYHEVKTPIMLDRKLWEKSGHWEKFKENMFVVED-DKKELAIKPMNCPCHVQIFKSKI 346 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY+ LP + + R+E +G+MR R F DA+ F + + + Sbjct: 347 RSYKELPIRMAEFGMCHRNEPSGSLYGLMRVRGFTQDDAHIFCTHEQVRDE-VLRFYELL 405 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ G S+ ++ P S E D S + Sbjct: 406 MEVYKDFGFDSVTVKLSDRPENRIGSDE-----------------IWDRSEQSLMEPMNA 448 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + +I + A Y + L DS+ + ++ G A Sbjct: 449 LGVQYTINKGEGAFYGPKLEF---TLKDSIGREWQCGTVQLDFVLPDRLG--------AY 497 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + G DGK H + +G + ++ + G W + I Sbjct: 498 YIGEDGKKHIPVIIHRAILGTIERFIGILIEHYAGNIPAW------LAPVQLEILTVSGE 551 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + + S+ V + E I + A P+ +VG D V ++ Sbjct: 552 VAEYARDLAEMASQENVRVELNAAEENISHKIRKAIFNKVPIVWVVGKSEAGDRGVSVRR 611 Query: 421 RLTGIREDMSLEEVINYA 438 +G M+ + + Sbjct: 612 YGSGETCRMAAGKALKTL 629 >gi|325109306|ref|YP_004270374.1| prolyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305] gi|324969574|gb|ADY60352.1| Prolyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305] Length = 578 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 112/228 (49%), Positives = 153/228 (67%), Gaps = 3/228 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR ++ +P ++E P DAE+ SH+LMLR G+I Q G Y++LPLG +++ AIIREE Sbjct: 1 MRWTQSLIPTMKETPADAEVPSHQLMLRAGLIRQLMAGAYTYLPLGWRSVQKAAAIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK---AMIYGPTHEEVMTDI 117 R GA E+ +P LQ +L+ +GR +++G +++ + GPTHEEV+TD+ Sbjct: 61 MERAGACELHMPALQPIELFERTGRINAFGSVLMKFDVPRGDRKVPVALGPTHEEVVTDL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 HI SYR LP T YQIQ KFR+E RPRFGV+R+ EFLMKDAYSF + E +Y+ M Sbjct: 121 ISRHISSYRQLPLTVYQIQTKFRNEERPRFGVLRTSEFLMKDAYSFASSLEQLNTTYDAM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSK 225 + +Y R+F R GL+ IP+ AESGPIGGD SHEF++ AD GE Q+ K Sbjct: 181 YDAYCRVFKRCGLEFIPVEAESGPIGGDASHEFMIPADNGEDQIVYCK 228 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 105/193 (54%), Gaps = 2/193 (1%) Query: 259 TSDVHNEKLFDSLPE--NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 T D+ N D P+ GIEVGH+F GTKYS +SA + K H + MG Sbjct: 384 THDLRNAAAGDPCPKSGEPMDLVHGIEVGHVFKLGTKYSESLSAMYLDEHEKRHPIIMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R+VA + E+ HD KG++WP S+AP+++ +I +K D+ A IYA L + G Sbjct: 444 YGIGVNRIVAGLAETRHDDKGLLWPISIAPYEVLIIPLKTDDEELMSAANSIYAELKEQG 503 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV DD + G +F ADL+G P ++++G K + + E+K R E + L++V+ Sbjct: 504 VDVLMDDRSARPGVKFNDADLIGIPYRIVIGGKGLKEGVAEVKARTDADAEKVPLDQVVA 563 Query: 437 YASHRFSNNRPVL 449 + S + L Sbjct: 564 NVTSLVSAAKEAL 576 >gi|291165911|gb|EFE27958.1| threonine--tRNA ligase [Filifactor alocis ATCC 35896] Length = 655 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 70/445 (15%), Positives = 155/445 (34%), Gaps = 36/445 (8%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT- 64 Y + + + RD ++ L T + +G+ LP G K + + I + ++R Sbjct: 230 YLVYLEEIKKRDHNKLGREMELFTT-VDVIGQGLPLLLPKGTKMVMKLQRWIEDLEDREW 288 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADR--NDKAMIYGPTHEEVMTDIFRSHI 122 G + P + +DL+ SG +D Y + M L D + + P ++++ Sbjct: 289 GYVRTKTPLMAKSDLYRISGHWDHYKEGMFVLGDEEVDKEVFALRPMTCPFQYYVYKNTQ 348 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP+ + FR+E G+ R R+F + + ++ + + N + ++ Sbjct: 349 KSYRDLPYRMGETSTLFRNEDSGEMHGLTRVRQFTISEGHNVVRPDQAEEELQNCLNLAV 408 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + + D++ + + + + + + Sbjct: 409 -------------YVLTTLGLQDDVTFRLSKWDPNNREKYLGDESYWETTQEALRNILVE 455 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y D+ ++ K + I + Sbjct: 456 KGLPFKEADGEAAFYGPKIDIQARNVY-----GKEDTMITI------QLDCAIAENFDMY 504 Query: 302 FKGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + +G+ + +G A + + +P + P ++ ++ I Sbjct: 505 YIDQNGEKKRPYIIHRTSLGCYERTLAWLI---EKYAGKFPTWLCPEQVRILPISDK--- 558 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + E++ L++ G DV D E+IG + A L P ++VG K SD V ++ Sbjct: 559 YAEYAEEVKQELARNGVDVTVDHRSEKIGFKIRDARLNRLPYMLVVGEKEASDRTVSVRS 618 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R G +++ ++ Sbjct: 619 RYAGDEGIEAVDSFVDRICKEIRTK 643 >gi|115389848|ref|XP_001212429.1| threonyl-tRNA synthetase [Aspergillus terreus NIH2624] gi|114194825|gb|EAU36525.1| threonyl-tRNA synthetase [Aspergillus terreus NIH2624] Length = 713 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 77/462 (16%), Positives = 140/462 (30%), Gaps = 49/462 (10%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ + L L+E R+ L S G LP G K + + ++R E Sbjct: 279 KQMQEHLKFLEEAEKRNHLRIGKDQELF--FFDDVSPGCAFLLPNGTKIFNALQTLLRSE 336 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + +W SG + Y +M +L D + P + +F Sbjct: 337 YRKRGYQEVQTPNMYDVGIWKTSGHWAHYKDDMFKL-DVEKREWALKPMNCPGHFVLFGH 395 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SYR LP + R+E G+ R R+F D + F + +F Sbjct: 396 RERSYRELPLRIADFGVLHRNEASGALSGLTRVRKFQQDDTHIFCTQDQIMSE-IEGLFD 454 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 I+ G ++ + P + + ++ Sbjct: 455 FLQSIYGLFGFTF-KLKLSTRP-----------------EKYLGELETWNYAEEQLKAAM 496 Query: 240 DDIISLNSIV-EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 + + E A Y D+ + D+L + + ++ F +Y Sbjct: 497 TKFKGDDWTIDEGDGAFYGPKIDI---TIADALKREFQCATIQLDYQAPLNFKLEYMTHE 553 Query: 299 SATFKG---------ADGKDHYVQMGSYGIGAM-RVVAAVIESSHDGKGIIWPDSVAPFK 348 A K G+ V + IG+ R + +IE Sbjct: 554 RADVKDGETAKPGEPGPGRARPVVIHRAIIGSFERFLGILIEHFGGKWPFWISPRQILIV 613 Query: 349 ISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGS 408 + + D E++ L +V D G + + L + +VG+ Sbjct: 614 PVMPAVN-------DYVEELQTILRGDKLNVDIDISGNTMQKKIRNGQLAQYNFIFVVGA 666 Query: 409 KFVSDSKVEIKHRL---TGIREDM-SLEEVINYASHRFSNNR 446 V I++R T + M LEE R Sbjct: 667 SEKESRSVNIRNRDDPATQKQGVMIPLEEAREKLRVLRKERR 708 >gi|306828825|ref|ZP_07462017.1| proline--tRNA ligase [Streptococcus mitis ATCC 6249] gi|304429003|gb|EFM32091.1| proline--tRNA ligase [Streptococcus mitis ATCC 6249] Length = 617 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 105/257 (40%), Positives = 147/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWVVLDKSVASFDEIPEEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L +V Sbjct: 241 QEEIKAELLKWMVSGED 257 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E G+ +P +APF + LI + A D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGVNFPKELAPFDVHLITVNAKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEANLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + ++ + + Sbjct: 593 IKATGDTIEVHADNLLETL--EILSKK 617 >gi|307720827|ref|YP_003891967.1| prolyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294] gi|306978920|gb|ADN08955.1| prolyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294] Length = 568 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 108/265 (40%), Positives = 153/265 (57%), Gaps = 5/265 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MRRSK F+P +E P DA + SH + R G I Q + G+Y++LPL ++ + + II EE Sbjct: 1 MRRSKAFIPTTKEAPSDATLPSHIFLSRAGFITQVAAGLYNYLPLAKRVIKKIENIINEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ + + A+LW ESGR + +GKE+LR DR + + GPTHEE+M D+ R+ Sbjct: 61 MTKIGAQEVELSFVTPAELWQESGRIEKFGKELLRFHDRKNNLFVLGPTHEEMMVDVVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+NLP YQI+ KFRDE RPRFG+MR REF+MKD YSF T E ++ + + Sbjct: 121 RVTSYKNLPLNLYQIKTKFRDEARPRFGLMRGREFIMKDGYSFHATTEDLDREFDTVEEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I RLGL + A+SG IGG S E +VLAD+GE + ++ E Sbjct: 181 YKKILTRLGLDFRIVEADSGAIGGSGSKELMVLADSGEDTIAVCSKC-EYGANIEAASRS 239 Query: 241 DIISLNSIVE----QWTAPYAATSD 261 + E ++ P T D Sbjct: 240 KRSHIPEAPEVTFNKFKTPDVKTID 264 Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 68/228 (29%), Positives = 108/228 (47%), Gaps = 1/228 (0%) Query: 215 DTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN 274 D + + I N I ++ V A + ++V+ + E Sbjct: 342 DKAKHVIDSDLKDAKDMICGANEAGYHYIGVDLSVLSDVAYFEDIAEVNEGDICPHCEEG 401 Query: 275 KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD 334 +GIEVGHIF GT YS + A F +GK MG+YG+G R+VAAVIE HD Sbjct: 402 TLSFTKGIEVGHIFKLGTTYSEALKAEFLDENGKAQPFIMGTYGMGVSRMVAAVIEQHHD 461 Query: 335 GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAV 394 G IW + AP+ ++++ D+ A EK+Y +L +V DD E+ G + Sbjct: 462 DNGCIWTKATAPYMVNIMISNIKDEAQVQAGEKLYKQLQDADVEVMLDDRKERFGFKMKD 521 Query: 395 ADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 A+L+GFP +++G K + + ++I R+T + D+ EE+ N Sbjct: 522 AELIGFPYTIVIG-KELVNGHMQIFERVTKEKTDIKSEEIFNKIMELV 568 >gi|312867906|ref|ZP_07728110.1| proline--tRNA ligase [Streptococcus parasanguinis F0405] gi|311096310|gb|EFQ54550.1| proline--tRNA ligase [Streptococcus parasanguinis F0405] Length = 616 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 106/257 (41%), Positives = 147/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKGIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SADLW ESGRYD+YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSADLWRESGRYDTYGEDLYKLKNREGSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV----LADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPTRTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L +V Sbjct: 241 QEEIKAELLKWMVSGED 257 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 98/200 (49%), Gaps = 16/200 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ K V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGKGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLIPVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +I L G +V DD E+ G +F+ +DL+G P++V VG K ++ VE+K Sbjct: 534 ASLALTNRIEEALVNKGYEVLVDDRNERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYAS 439 + TG ++ + ++ S Sbjct: 593 IKATGDTIEVHADNLLETLS 612 >gi|212534744|ref|XP_002147528.1| threonyl-tRNA synthetase, putative [Penicillium marneffei ATCC 18224] gi|210069927|gb|EEA24017.1| threonyl-tRNA synthetase, putative [Penicillium marneffei ATCC 18224] Length = 724 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 77/460 (16%), Positives = 136/460 (29%), Gaps = 52/460 (11%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E R+ + + L S G LP G K + + ++R E + G Sbjct: 291 LKFLEEAEKRNHQKIGKEQELF--FFDDVSPGCPFLLPNGTKIFNALQKLLRSEYRKRGY 348 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + +W SG + Y +M +L D + P + +F +SYR Sbjct: 349 QEVQTPNMYDVSIWKTSGHWAHYSDDMFKL-DVEKREWALKPMNCPGHFMLFGHRERSYR 407 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP + R+E G+ R R+F D + F + S +F I+ Sbjct: 408 ELPLRIADFGVLHRNEASGALSGLTRVRKFQQDDTHIFCTAEQISSE-IEGLFDFLKSIY 466 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G ++ + P E A+ Q D+ I Sbjct: 467 GLFGFTF-KLKLSTRPEKYMGELEAWNYAEDQLRQALNKFMGDDWEIN------------ 513 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTKYSLPM----- 298 E A Y D+ + D+L + + ++ F + Sbjct: 514 ----EGDGAFYGPKIDI---TIADALKREFQCATIQLDYQAPINFKLEYITNEKQASADP 566 Query: 299 --------SATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 A + V + R + +IE Sbjct: 567 KANNDGAEKAKETNVNRARPVVIHRAIIGSFERFLGILIEHFAGKWPFWISPRQILIVPV 626 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 + + D +++ L +V D G + + L + +VG++ Sbjct: 627 MPALN-------DYAKELQQILLADKLNVDVDVSGNTLQKKIRTGQLAQYNFIFVVGAQE 679 Query: 411 VSDSKVEIKHRLTGIR----EDMSLEEVINYASHRFSNNR 446 V I++R E +SLEE R Sbjct: 680 RDSRSVNIRNRDDPASHAKGELISLEEARVKLRALRKERR 719 >gi|330464914|ref|YP_004402657.1| prolyl-tRNA synthetase [Verrucosispora maris AB-18-032] gi|328807885|gb|AEB42057.1| prolyl-tRNA synthetase [Verrucosispora maris AB-18-032] Length = 583 Score = 200 bits (508), Expect = 5e-49, Method: Composition-based stats. Identities = 102/239 (42%), Positives = 138/239 (57%), Gaps = 1/239 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S L L+++P DAE+ SH+L+LR G + + + G Y+WLPLG+ LD V+ I+R E Sbjct: 4 RMSTTLLRTLRDDPADAEVPSHRLLLRAGYLRRAAPGGYTWLPLGKLVLDRVSEIVRAEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G E+ P L A+ + SGR+ YG ++ LADR + PTHEE+ + + Sbjct: 64 AAIGGQEVHFPALLPAEPYRTSGRWTEYGDDIFTLADRRGAEHLLAPTHEEMAALLVKEL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+LP T +QIQ KFRDE RPR G++R REFLMKDAYSFDL EG + +Y + +Y Sbjct: 124 FTSYRDLPVTLFQIQTKFRDEARPRAGLLRGREFLMKDAYSFDLDDEGLRAAYGRHRAAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 +IF RLGL + A SG +GG S EF+ A GE D D +E Sbjct: 184 QKIFDRLGLDYTVVHAVSGAMGGSASEEFLATAAVGEDTYVGCTDC-DHAANTEAVTTP 241 Score = 136 bits (343), Expect = 6e-30, Method: Composition-based stats. Identities = 64/186 (34%), Positives = 97/186 (52%), Gaps = 7/186 (3%) Query: 258 ATSDVHNEKLFDSLP---ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 T + + D P + + RGIE+GHIF G +Y+ + G GK + M Sbjct: 396 GTVEAAEVRPGDPCPACAQGRLTMRRGIEIGHIFQLGRRYTDAFAVDVLGPQGKPVRLTM 455 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G YGIG R VAA+ E HD +G++WP SVAP + L+ DA + A+L+ Sbjct: 456 GCYGIGVSRAVAAIAEQHHDERGLVWPTSVAPCDVHLVAAGKG--PQLDAAVDLGAQLAA 513 Query: 375 VGCDVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G V DD G G +F A+L+G P V+VG + ++D VE++ R TG R ++SL + Sbjct: 514 AGLRVLVDDRVGVSAGVKFTDAELIGIPRTVVVGRR-LADGYVELRDRATGERVELSLPD 572 Query: 434 VINYAS 439 ++ + Sbjct: 573 LLAQLA 578 >gi|319945653|ref|ZP_08019905.1| proline--tRNA ligase [Streptococcus australis ATCC 700641] gi|319748252|gb|EFW00494.1| proline--tRNA ligase [Streptococcus australis ATCC 700641] Length = 616 Score = 200 bits (508), Expect = 5e-49, Method: Composition-based stats. Identities = 105/257 (40%), Positives = 148/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV----LADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPSRTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L +V Sbjct: 241 QEEIKAELLKWMVSGED 257 Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 16/200 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLIPVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + KI +L K G +V DD E+ G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 ASLELTSKIEDQLVKAGYEVLVDDRNERAGVKFSDSDLIGLPIRITVGKK-AADGVVEVK 592 Query: 420 HRLTGIREDMSLEEVINYAS 439 + +G ++ + ++ S Sbjct: 593 IKASGDTIEVHADNLLETLS 612 >gi|86158405|ref|YP_465190.1| threonyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C] gi|123736663|sp|Q2IJC0|SYT_ANADE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|85774916|gb|ABC81753.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C] Length = 650 Score = 200 bits (508), Expect = 5e-49, Method: Composition-based stats. Identities = 79/446 (17%), Positives = 141/446 (31%), Gaps = 49/446 (10%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 + + RD +L L T H+++ G WLP G + + +R + G Sbjct: 238 LAKLEEVKKRDHRRLGPQLGLFT--FHEYAPGAPFWLPAGTVLYNVLEDAMRRLVLKNGY 295 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLAD---------RNDKAMIYGPTHEEVMTDI 117 E+ P L + LW SG + Y + M + D + + P + I Sbjct: 296 QEVKTPLLFNKRLWETSGHWGKYRENMFLVVDSESDPALALEDRCSFSLKPMNCPSHHLI 355 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 +R +SYR LP ++ R+E G+ R R+F DA+ + + + + Sbjct: 356 YRMDKRSYRELPVRYFTTDALHRNEASGSLGGLTRVRQFEQDDAHIYLREEQVTDE-VLR 414 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 +F ++ GL F T Q D Sbjct: 415 IFELMKVVYGAFGLG------------------FEATFSTRPEQRIGDDALWDRAEALLR 456 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 D ++ A Y D+ + DSL + ++ Sbjct: 457 KSLDATGLKWTLNPGDGAFYGPKIDML---VTDSLGRRWQTCTIQLDYAAP--------E 505 Query: 297 PMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 TF G D K+H + G+ A++ + +P +AP + ++ + Sbjct: 506 RFDLTFVGEDNKEHRPVVIHRAIYGSFERFIAILT---EHYAGAFPAWLAPVQARVVTVS 562 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 G V D +++G++ A L P ++VG K V Sbjct: 563 DRFDAWAREAAAALQA---RGWRVEVDGSSDKLGAKIRNAQLAKIPFTLVVGEKEVEARG 619 Query: 416 VEIKHRLTGIREDMSLEEVINYASHR 441 V + + M LE + Sbjct: 620 VSPRRHGGEDLKTMPLETFAELMARE 645 >gi|157736649|ref|YP_001489332.1| prolyl-tRNA synthetase [Arcobacter butzleri RM4018] gi|166980098|sp|A8ERT9|SYP_ARCB4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157698503|gb|ABV66663.1| prolyl-tRNA synthetase [Arcobacter butzleri RM4018] Length = 568 Score = 200 bits (508), Expect = 5e-49, Method: Composition-based stats. Identities = 100/235 (42%), Positives = 141/235 (60%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK F+P +E P DA + SH+ ++R G I Q GIY ++PLG+ L+ + AI++EE Sbjct: 1 MKFSKMFIPTTKETPNDATLPSHQYLVRGGFIAQTGAGIYDFMPLGKIVLEKIRAIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ + LW ESGR + G EMLR DR + + PT+EE + ++ ++ Sbjct: 61 MDEAGANEVQFGFVTPLTLWQESGRATTMGAEMLRFKDRKNGEFVLSPTNEEAVVNMVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP YQI KFRDE RPRFG+MR REFLMKD YSF + E +N M + Sbjct: 121 RITSYKDLPLHLYQINTKFRDEARPRFGLMRGREFLMKDGYSFHSSEEDLVREFNLMETT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +I+ +LGL + A+SG IGG S EF V+AD+GE + D+ E Sbjct: 181 YKKIYTKLGLDFRVVAADSGAIGGSGSKEFHVIADSGEDTLVVCDSC-DYGANIE 234 Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats. Identities = 67/180 (37%), Positives = 95/180 (52%), Gaps = 2/180 (1%) Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRV 324 E + K +GIE GHIF GTKYS M+A F +GK MG YGIG R+ Sbjct: 390 EGDICACCGGKLSYTKGIEAGHIFQLGTKYSSAMNANFLDENGKAKPFIMGCYGIGVSRL 449 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 VAAVIE +HD KG IW + APF + +I + + E++Y++L + G DD Sbjct: 450 VAAVIEQNHDDKGCIWTKATAPFMVDIIVSNSKKEEEAKVGEELYSKLKQAGISTILDDR 509 Query: 385 -GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 + G + + +LLGFP V++G K + D VEI R T + D+ ++EVI+ Sbjct: 510 INARFGFKMSDFELLGFPYAVVIGKK-LEDGLVEIVDRKTLEKIDVKVDEVISKILELVK 568 >gi|32491346|ref|NP_871600.1| prolyl-tRNA synthetase [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|81844435|sp|Q8D1V9|SYP_WIGBR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|25166553|dbj|BAC24743.1| proS [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 561 Score = 200 bits (508), Expect = 5e-49, Method: Composition-based stats. Identities = 113/288 (39%), Positives = 165/288 (57%), Gaps = 2/288 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+Y+L L+++P + E SH+LM+R+GMI + S G+Y+WLP G + L + IIR E Sbjct: 1 MRTSQYYLATLKDSPSETEGISHRLMIRSGMIRKLSSGLYAWLPTGFRVLKKIENIIRHE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ GAIE+ +P +Q + +W SGRY+ YG E+L+ DR K + PTHEEV++ I Sbjct: 61 MNKIGAIEILMPIIQPSLIWKNSGRYEEYGLELLKFYDRKKKQFVLAPTHEEVISKIILK 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I + P FYQI KFRDE RPR G MRS+EF+MKD+YSF L + + +Y+ M + Sbjct: 121 EINFNKVFPINFYQIYSKFRDEARPRCGTMRSKEFVMKDSYSFHLNEKSLEKTYHIMQET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF+RL L +RA++G IGG +SHEF + + + K D + F Sbjct: 181 YKKIFNRLNLDYFVIRAKTGKIGGFISHEFHAYYNKSDVLINSYKKIFDK--NNIINKFK 238 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIF 288 I + +++E TSD+ + D K + IE H F Sbjct: 239 KKIEIKNLIEINAEDILLTSDLAKKFNIDIKQIIKILLVHSIEKNHPF 286 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 53/160 (33%), Positives = 91/160 (56%), Gaps = 2/160 (1%) Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 IE+GHIF G KYS P++ + K G YGIG R+V+ IE ++D GIIW Sbjct: 396 IEIGHIFQLGDKYSKPLNYSLLKDYNKKKIFM-GCYGIGISRLVSTYIEQNYDSNGIIWN 454 Query: 342 DSVAPFKISLINIKAH-DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGF 400 + +APFK+++I I + ++ E+IY +L + DV + D E+ G F+ +L+G Sbjct: 455 EEIAPFKVAIIPININFSIKVKNFSEEIYYKLCNLKIDVLFYDNVERPGIMFSNIELIGI 514 Query: 401 PLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASH 440 P +I+ K + +S +E K+R+TG + ++ + + ++ Sbjct: 515 PHILIISDKNLKNSIIEYKNRITGDKLMINYKYIFDFLLQ 554 >gi|160878906|ref|YP_001557874.1| threonyl-tRNA synthetase [Clostridium phytofermentans ISDg] gi|160427572|gb|ABX41135.1| threonyl-tRNA synthetase [Clostridium phytofermentans ISDg] Length = 652 Score = 200 bits (508), Expect = 5e-49, Method: Composition-based stats. Identities = 73/446 (16%), Positives = 145/446 (32%), Gaps = 39/446 (8%) Query: 7 FLPILQE-NPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 FL L++ RD ++ L + +G+ +P G K + + I +E+ R G Sbjct: 229 FLNHLEDIKKRDHNKLGREMELFAT-VDVIGQGLPLLMPKGAKMIQTLQRWIEDEEERRG 287 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA---MIYGPTHEEVMTDIFRSHI 122 + P L DL+ S ++ Y + M L D D+ P +++ Sbjct: 288 YMRTKTPLLAKKDLYEISDHWNHYKEGMFVLGDEEDENAEVFALRPMTCPFQYYVYKQSQ 347 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 KSYR+LP + + FR+E G+ R R+F + + + TPE + + Sbjct: 348 KSYRDLPCRYGETSTLFRNEDSGEMHGLTRVRQFTISEGHLIV-TPEQLEEEFKGCVDLA 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 LGL D+++ + + +++ + + Sbjct: 407 KYCLTTLGLAD------------DVTYRLSKWDPNNQGKYLGNEETWNKVQNMMRDILNH 454 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I + + A Y D+ + ++ K + I + T Sbjct: 455 IGLDFTEEDGEAAFYGPKLDIQAKNVY-----GKEDTMITI------QLDMFLADRFDMT 503 Query: 302 FKGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHD-GKGIIWPDSVAPFKISLINIKAHDQ 359 + A+G+ + +G A + + + Sbjct: 504 YIDANGEKKRPYIIHRTSMGCYERTLAWLIEKYAGKFPTWLCPEQVRILPI-------SE 556 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D + + L G V D+ E+IG + A L P ++VG K + V ++ Sbjct: 557 KYSDYAKMVEKELLDNGVLVTVDNRAEKIGYKIREARLDRVPYMLVVGQKEAEEGLVSVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSNN 445 R G + + ++ Sbjct: 617 SRYLGDEGQKKVSDFVDAICKEIRTK 642 >gi|296272187|ref|YP_003654818.1| prolyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299] gi|296096362|gb|ADG92312.1| prolyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299] Length = 572 Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 102/248 (41%), Positives = 150/248 (60%), Gaps = 1/248 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ F+P +E P DA +ASH+ ++R G I Q G+Y++LPLG+ LD + A+++EE Sbjct: 1 MKFSQMFMPTTKETPNDATLASHQYLIRGGFITQTGSGLYNFLPLGKIVLDKIRAVVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + TGA E+ + + +LW +SGR G E+L+ DR + PT+EE + DI ++ Sbjct: 61 MDNTGANELLMSFVTPLELWEQSGRASVMGPELLKFKDRKGAGFVLSPTNEETVVDIVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP Y I KFRDE RPRFG+MR REFLMKDAYSF T E ++ M + Sbjct: 121 RITSYKDLPINLYHINTKFRDEARPRFGLMRGREFLMKDAYSFHATHEDLVREFHVMEDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I+ RLGL+ + A+SG IGG S EF+VLA++GE + +D ++ E Sbjct: 181 YKKIYERLGLEYRVVAADSGAIGGSGSKEFMVLANSGEDTIVVCEDC-EYGANIEAAVRA 239 Query: 241 DIISLNSI 248 + N Sbjct: 240 KKETKNWY 247 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 73/178 (41%), Positives = 97/178 (54%), Gaps = 2/178 (1%) Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRV 324 E S K + +GIE GHIF GTKYS M ATF +GK MG YGIG R+ Sbjct: 395 EGDTCSCCGGKLIHTKGIEAGHIFQLGTKYSSAMDATFLDNNGKAQPFIMGCYGIGVSRL 454 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 VAAVIE +HD KG IW APF + +I A + +A +KIY L G DD Sbjct: 455 VAAVIEQNHDDKGCIWTKETAPFMVDVIVSNAKKEEELNAGKKIYNDLKIAGISTILDDR 514 Query: 385 -GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 + G + + +L+GFP V+VG K + + VEI +R T +E++SL+EV+N Sbjct: 515 VNARFGFKMSDFELIGFPYAVVVGKK-LPEGIVEIVNRKTLEKEEVSLDEVVNKLKKL 571 >gi|322390835|ref|ZP_08064345.1| proline--tRNA ligase [Streptococcus parasanguinis ATCC 903] gi|321142505|gb|EFX37973.1| proline--tRNA ligase [Streptococcus parasanguinis ATCC 903] Length = 616 Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 107/279 (38%), Positives = 154/279 (55%), Gaps = 4/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKGIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREGSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R G+ + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGIDYKAIIGDGGAMGGKDSQEFMAVTPARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 + L +V ++ + L + E K Sbjct: 241 QEEIKAELLKWMVSGEDTIAYSSESTYAANLEMATNEYK 279 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 16/200 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ K V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGKGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLIPVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ++I L G +V DD E+ G +F+ +DL+G P++V VG K ++ VE+K Sbjct: 534 ASLALTDRIEEALVNKGYEVLVDDRNERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYAS 439 + TG ++ + ++ S Sbjct: 593 IKATGDTIEVHADNLLETLS 612 >gi|70993228|ref|XP_751461.1| threonyl-tRNA synthetase [Aspergillus fumigatus Af293] gi|66849095|gb|EAL89423.1| threonyl-tRNA synthetase, putative [Aspergillus fumigatus Af293] gi|159125604|gb|EDP50721.1| threonyl-tRNA synthetase, putative [Aspergillus fumigatus A1163] Length = 737 Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 74/467 (15%), Positives = 144/467 (30%), Gaps = 54/467 (11%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ + L L+E R+ L + S G LP G K + + A++R E Sbjct: 298 KQMQEHLKFLEEAEKRNHLRIGKDQELF--FFDEVSPGCPFLLPNGTKIFNALQALLRAE 355 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + +W SG + Y +M +L D + P + +F Sbjct: 356 YRKRGYQEVQTPNMYDVGIWKRSGHWAHYKDDMFKL-DVEKREWALKPMNCPGHFVLFGH 414 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SYR LP + R+E G+ R R+F D + F + + +F Sbjct: 415 RERSYRELPLRIADFGVLHRNEASGALSGLTRVRKFQQDDTHIFCTQDQIASE-IEGLFD 473 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 I+ G ++ + P + + ++ + Sbjct: 474 FLQSIYGLFGFTF-KLKLSTRP-----------------EKYLGDLETWNYAEEQLKSAM 515 Query: 240 DDIISLNSIV-EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTKYSL 296 + + E A Y D+ + D+L + + ++ F + Sbjct: 516 TKFKGKDWTIDEGDGAFYGPKIDI---TIADALKREFQCATIQLDYQAPINFKLEYMTNE 572 Query: 297 PMSATFKGA------------DGKDHYVQMGSYGIGAM-RVVAAVIESSHDGKGIIWPDS 343 A + + G+ V + IG+ R + +IE Sbjct: 573 KGQAVMEDSKNEGETKSNEPGPGRARPVVIHRAIIGSFERFLGILIEHFGGKWPFWISPR 632 Query: 344 VAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQ 403 + + D E++ L +V D G + + L + Sbjct: 633 QILIVPVMPAVN-------DYVEELQQILRGDKLNVDIDISGNTMQKKIRTGQLAQYNFI 685 Query: 404 VIVGSKFVSDSKVEIKHRLTGIRE----DMSLEEVINYASHRFSNNR 446 +VG++ V I++R + + LEE R Sbjct: 686 FVVGAQEKESRSVNIRNRDDPATQHKGVMVPLEEARQKLRALRKERR 732 >gi|296877243|ref|ZP_06901283.1| proline--tRNA ligase [Streptococcus parasanguinis ATCC 15912] gi|296431763|gb|EFH17570.1| proline--tRNA ligase [Streptococcus parasanguinis ATCC 15912] Length = 616 Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 107/279 (38%), Positives = 154/279 (55%), Gaps = 4/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKGIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREGSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R G+ + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGIDFKAIIGDGGAMGGKDSQEFMAVTPARTDLDRWVVLDKSVPSFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 + L +V ++ + L + E K Sbjct: 241 QEEIKAELLKWMVSGEDTIAYSSESTYAANLEMATNEYK 279 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 98/200 (49%), Gaps = 16/200 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ K V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGKGVLKFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLIPVNIKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +I L G +V DD E+ G +F+ +DL+G P++V VG K ++ VE+K Sbjct: 534 ASLALTNQIEESLVNKGYEVLVDDRNERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYAS 439 + TG ++ + ++ S Sbjct: 593 IKATGDTIEVHADNLLETLS 612 >gi|328907347|gb|EGG27113.1| threonine--tRNA ligase [Propionibacterium sp. P08] Length = 684 Score = 199 bits (507), Expect = 6e-49, Method: Composition-based stats. Identities = 68/455 (14%), Positives = 135/455 (29%), Gaps = 45/455 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + ++E R D +L L + + G+ + P G + + G Sbjct: 245 YQQRIKEAERRDHRKLGAELDLFS-FPEEIGPGLVVFHPKGAMLRHLIEEHVVARHMEAG 303 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHEEV 113 + + P + L+ SG Y M R + + + Sbjct: 304 FVFVHTPEITKGGLFHTSGHLPYYADTMFPPMLVDEERDEQGNVTRTGQEYYLKAMNCPM 363 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IFRS +SYR LP F+++ +R E G+ R R F D++++ + Sbjct: 364 HNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGE 423 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 K +L I GL + + G +FI + Sbjct: 424 -IKKQIEFFLSILADFGLNDFYLELSTREGGSAKEEKFIGSDED-----------WQAAT 471 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + + A Y + ++ D++ ++S + Sbjct: 472 DTLDQVCRNTGLQLVSDPGGAAFYGPKV---SVQVKDAIGRTWQMSTIQYDFNQP----- 523 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + ADG + S +G++ V+ + G +W Sbjct: 524 ---ERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW------LSPVQ 574 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + + + D K L G V D ++ G + A P +I G + Sbjct: 575 VRLVPVAEAFNDYVTKFAEVLESRGIRVETDLSSDRFGKKIRNASKEKVPFVLIAGGEDA 634 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 V + R ++ +E + + +R Sbjct: 635 EAGAVSFRLRDGSQVNGVARDETVRIIAAWNDEHR 669 >gi|325972766|ref|YP_004248957.1| prolyl-tRNA synthetase [Spirochaeta sp. Buddy] gi|324028004|gb|ADY14763.1| Prolyl-tRNA synthetase [Spirochaeta sp. Buddy] Length = 588 Score = 199 bits (507), Expect = 6e-49, Method: Composition-based stats. Identities = 99/227 (43%), Positives = 135/227 (59%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F L+E P A+ ++ +LR G I Q GI+S LP G A + IIR+E Sbjct: 1 MRMSRLFSKTLREAPNGADSKGYEYLLRAGFIRQLGAGIFSLLPFGFNATKKIEQIIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N G E+ +P + AD+W E+GRY S KEM R +DR + M+ THEE +TD+ R Sbjct: 61 MNAIGGQEILMPLVNPADIWKETGRYYSIDKEMSRFSDRVGRDMVLAMTHEEAVTDLARG 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQIQ K+RD+ RPR G++R REF MKD+YSFD+ EG Y + + Sbjct: 121 EIDSYKRLPLLVYQIQTKWRDDPRPRAGLIRVREFTMKDSYSFDVDQEGLDAQYAAHYKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 Y RIF R GL I + A+SG +GG +SHE++ L+ GE + Sbjct: 181 YFRIFSRCGLPVIVVGADSGMMGGKISHEYMYLSSIGEDTIITCPSC 227 Score = 146 bits (368), Expect = 7e-33, Method: Composition-based stats. Identities = 61/191 (31%), Positives = 102/191 (53%), Gaps = 7/191 (3%) Query: 257 AATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 +D+ + S PE S++G+EVG+IF T+YS M+ +++ G V M Sbjct: 385 GQVADIASAAAGYSCPECSKPLSSSKGVEVGNIFQLNTRYSESMNCSYQDEGGLRKPVIM 444 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 GSYGIG R++A + E+ D +G+ P SVAP ++ L+++ + E+IY +LS Sbjct: 445 GSYGIGVGRLLACLAENYSDEQGLSLPISVAPMQVHLVSLVKD----AEIGEQIYNKLSD 500 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT-GIREDMSLEE 433 G +V +DD E G +FA ADL+G P+++ +G++ + + KVE+K R L Sbjct: 501 AGIEVLYDDRKESAGVKFADADLIGLPIRITLGNRSLKEGKVEVKLRRNLEESFSFELAS 560 Query: 434 VINYASHRFSN 444 V+ + Sbjct: 561 VVEETKALIAK 571 >gi|313837083|gb|EFS74797.1| threonyl-tRNA synthetase [Propionibacterium acnes HL037PA2] gi|314927888|gb|EFS91719.1| threonyl-tRNA synthetase [Propionibacterium acnes HL044PA1] gi|314971856|gb|EFT15954.1| threonyl-tRNA synthetase [Propionibacterium acnes HL037PA3] Length = 689 Score = 199 bits (507), Expect = 6e-49, Method: Composition-based stats. Identities = 68/455 (14%), Positives = 135/455 (29%), Gaps = 45/455 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + ++E R D +L L + + G+ + P G + + G Sbjct: 250 YQQRIKEAERRDHRKLGAELDLFS-FPEEIGPGLVVFHPKGAMLRHLIEEHVVARHMEAG 308 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHEEV 113 + + P + L+ SG Y M R + + + Sbjct: 309 FVFVHTPEITKGGLFHTSGHLPYYADTMFPPMLVDEERDEQGNVTRTGQEYYLKAMNCPM 368 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IFRS +SYR LP F+++ +R E G+ R R F D++++ + Sbjct: 369 HNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGE 428 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 K +L I GL + + G +FI + Sbjct: 429 -IKKQIEFFLSILADFGLNDFYLELSTREGGSAKEEKFIGSDED-----------WQAAT 476 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + + A Y + ++ D++ ++S + Sbjct: 477 DTLDQVCRNTGLQLVSDPGGAAFYGPKV---SVQVKDAIGRTWQMSTIQYDFNQP----- 528 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + ADG + S +G++ V+ + G +W Sbjct: 529 ---ERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW------LSPVQ 579 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + + + D K L G V D ++ G + A P +I G + Sbjct: 580 VRLVPVAEAFNDYVTKFAEVLESRGIRVETDLSSDRFGKKIRNASKEKVPFVLIAGGEDA 639 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 V + R ++ +E + + +R Sbjct: 640 EAGAVSFRLRDGSQVNGVARDETVRIIAAWNDEHR 674 >gi|322697146|gb|EFY88929.1| threonyl-tRNA synthetase, putative [Metarhizium acridum CQMa 102] Length = 759 Score = 199 bits (507), Expect = 6e-49, Method: Composition-based stats. Identities = 78/500 (15%), Positives = 159/500 (31%), Gaps = 86/500 (17%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + + RD ++ L S G +LP G + + + A++RE+ Sbjct: 287 MK--EWLTYLEEAKKRDHQLIGKNQKLFW--FSPLSPGSPFFLPHGTRIFNAIQAMLREQ 342 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR------------------------- 95 G E+ P + A LW SG +D Y ++M R Sbjct: 343 YWMRGYDEVHSPLMYDAQLWKTSGHWDHYQEDMFRVPLKHTHGAAPDASAASGPDASKDA 402 Query: 96 ----LADRNDKA---------MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDE 142 D + P + +F S +SYR+LP+ + R+E Sbjct: 403 NKPADKDGENAEVAKLEQERLFALKPMNCPGHALMFASEERSYRSLPWRVADFSVLHRNE 462 Query: 143 LRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 G+ R R+F DA+ F + + + ++ + + ++ + P Sbjct: 463 ASGALTGLTRVRKFQQDDAHIFCTIDQVTDE--LRGLFKFMTHVYTMFGFPFKLKLSTRP 520 Query: 202 IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV-EQWTAPYAATS 260 D + + ++ A Y Sbjct: 521 -----------------DSYMGKLSDWDAAEDRLKKALQEFKGDDWVINPGDGAFYGPKI 563 Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFG----TKYSLPMSATFKGAD------GKDH 310 DV + D+L + + ++ F T S A +G + G Sbjct: 564 DV---TVHDALGREFQCATIQLDFQLPQNFNLLYRTNESTADRAKGEGEEEGDIPSGMAR 620 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V + IG+ ++ + WP ++P ++ +I I + D ++ Sbjct: 621 PVMIHRAVIGSFERFMGILI---EHFAGKWPFWLSPRQVMVIPIMKDAE---DYAREVRD 674 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE--- 427 L D G + + A L + ++VG++ + V I++R + Sbjct: 675 ILHDAKLYADVDVSGNTLQKKIRAAQLAQYNFVMVVGAEEIEKRAVNIRNRDDPSSQQKG 734 Query: 428 -DMSLEEVINYASHRFSNNR 446 + L++V+ + R Sbjct: 735 AMIDLDDVVKRLVELKAERR 754 >gi|319948489|ref|ZP_08022623.1| threonyl-tRNA synthetase [Dietzia cinnamea P4] gi|319437856|gb|EFV92842.1| threonyl-tRNA synthetase [Dietzia cinnamea P4] Length = 699 Score = 199 bits (507), Expect = 6e-49, Method: Composition-based stats. Identities = 60/455 (13%), Positives = 129/455 (28%), Gaps = 49/455 (10%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 Y + + RD +L L + + G + P G + + G Sbjct: 271 YLDRLAEAEKRDHRRLGTELDLFS-FPDEIGSGFPVFHPRGGIIRNEMEQHSLRRHLAAG 329 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHEEV 113 ++ P + DL+ +S Y + M + + P + + Sbjct: 330 YSLVNTPHVTKGDLFRKSQHLSWYSEGMFPPMVLDAEHDADGNETKPGQDYYVKPMNCPM 389 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 +F S +SYR LP ++ +R E G+ R+R F DA+ + + Sbjct: 390 HNLVFDSRGRSYRELPLRMFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYCTEEQMEGE 449 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 + + + GL + + + + + Sbjct: 450 -IASVLSFIISLLRDYGLDDFYLELST----------------KDPEKYVGGDELWERAT 492 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y + + D++ ++S ++ F Sbjct: 493 ETLRRVATNSGLELVPDPGGAAFYGPKI---SVQARDAIGRTWQMSTVQLD----FNLP- 544 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 T+ ADG + G++ AV+ + G W V I + Sbjct: 545 ---ELFDLTYNAADGTKKRPVMIHRALFGSIERFFAVLLEHYAGLFPAWLAPVQVVGIPV 601 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + E + L G D E++ + P ++ G + V Sbjct: 602 A------EAHEKHLEDVIDELRGRGIRAELDTSDERMQKKIRNHTTGKVPFMLLAGDRDV 655 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 V + +S ++ ++ ++ R Sbjct: 656 EAGAVSFRFPDGTQLNGVSRNAAMDKIAYWINSRR 690 >gi|302386675|ref|YP_003822497.1| threonyl-tRNA synthetase [Clostridium saccharolyticum WM1] gi|302197303|gb|ADL04874.1| threonyl-tRNA synthetase [Clostridium saccharolyticum WM1] Length = 653 Score = 199 bits (507), Expect = 6e-49, Method: Composition-based stats. Identities = 70/435 (16%), Positives = 137/435 (31%), Gaps = 37/435 (8%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD L + + +G+ +P G K + + I +E+ + G + P + Sbjct: 239 RDHNKLGRDLEIFAT-VDVIGQGLPLLMPKGAKIVQTLQRWIEDEEEKRGYMRTKTPLMA 297 Query: 76 SADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFY 133 DL++ S +D Y + M + +D+ P +++ KSYR+LP + Sbjct: 298 KKDLYIISDHWDHYKEGMFVLGNEETDDEVFALRPMTCPFQYYVYKQSQKSYRDLPCRYG 357 Query: 134 QIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKS 192 + FR+E G+ R R+F + + + P+ + + LGL+ Sbjct: 358 ETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVR-PDQIEEEFKGCVDLAKYCLTTLGLE- 415 Query: 193 IPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQW 252 GD+++ + + D D I + Sbjct: 416 -----------GDVTYRMSKWDPNNADHYLGTPEMWDEVEDMMRKILDHIGIQYTEAAGE 464 Query: 253 TAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A Y D+ + ++ K + I + +F DG Sbjct: 465 AAFYGPKLDIQAKNVY-----GKEDTMITI------QLDMFLAERFDMSFVDKDGTKKRP 513 Query: 313 QM-GSYGIGAMRVVAAVIESSHD-GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 + +G A + ++ + + K+ A Sbjct: 514 YIIHRTSMGCYERTLAWLIEKYEGAFPTWLCPEQVRILPI-------SEKYHEYAGKVAA 566 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 +L + G D+ E+IG + A L P ++VG K + V ++ R G Sbjct: 567 QLKENGILATVDERAEKIGYKIREARLSKLPYMLVVGQKEEEEGVVSVRSRFNGDEGQHP 626 Query: 431 LEEVINYASHRFSNN 445 L I+ Sbjct: 627 LSGFIDDICREIRTK 641 >gi|302922168|ref|XP_003053410.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256734351|gb|EEU47697.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 741 Score = 199 bits (507), Expect = 6e-49, Method: Composition-based stats. Identities = 67/449 (14%), Positives = 137/449 (30%), Gaps = 41/449 (9%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + R+ + + S G +LP G + + + +++ E + G E+ Sbjct: 315 EAAKRNHRKIGQ--DQKLFFFDEVSPGSTFFLPHGVRIYNALMDLLKGEYRKRGFTEVMS 372 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + +DLW SG + Y + M D + P + IF SY++LP+ Sbjct: 373 PNVYKSDLWKISGHWGHYEENMFTF-DVEKERYGLKPMNCPGHCKIFAHSDVSYKDLPWR 431 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + R+E G+ R R F DA+ F + F ++ G Sbjct: 432 MADFGVLHRNEFSGALSGLTRVRRFQQDDAHIFCTVDQIRDE-IESAFDFLSAVYGLFGF 490 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 ++ + P I D E ++ + + + Sbjct: 491 SF-KLKLSTRPEKYVGD---IATWDIAEQKL----------QEALESFAKKTNAKWEFNP 536 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY---------SLPMSAT 301 A Y D+ L+D+L + + ++ F +Y S + Sbjct: 537 GDGAFYGPKIDI---TLYDALRRDHQCGTIQLDFNLPRRFKLRYVAGKDESGVSDGSDPS 593 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G V + +G+ + V+ GK W + ++ Sbjct: 594 EDLPAGYSRPVMIHRAVLGSFERMFGVLAEHFAGKWPFWLSPRQILVVPVMP------AV 647 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D ++I + + D + L + +VG++ V I++R Sbjct: 648 NDYAKEIQQIFQEKELYIDVDLSSNTFQKKIRTGQLEQYNFIFVVGAEEAKSRTVNIRNR 707 Query: 422 LTGIRED----MSLEEVINYASHRFSNNR 446 + + ++E + R Sbjct: 708 DDQATQTKGELVPIDEALESLVKLKVERR 736 >gi|1464742|gb|AAB04939.1| threonyl-tRNA synthetase [Homo sapiens] Length = 712 Score = 199 bits (507), Expect = 6e-49, Method: Composition-based stats. Identities = 70/443 (15%), Positives = 142/443 (32%), Gaps = 39/443 (8%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H+ S G +LP G + + IR E Sbjct: 294 KMLKEWEKFQEEAKNRDHRKIGRDQELY--FFHELSPGSCFFLPKGVYIYNALIEFIRSE 351 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + ++ LW+ SG + Y + M + P + + +F Sbjct: 352 YRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEL-FALKPMNCPGHSLMFDH 410 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP R+EL G+ R R F DA+ F + Sbjct: 411 RPRSWRELPLRLADFGGLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDE-IKGCLD 469 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G + P E D Sbjct: 470 FLRTVYSVFGFSFKLN-LSTRPEKFLGDIE-----------------VWDQAEKQLENSL 511 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D+ ++ D++ + + ++ F ++ + Sbjct: 512 NEFGEKWELNSGDGAFYGPKIDI---QIKDAIGRYHQCATIQLD----FQLPIRF----N 560 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 T+ DG+D + + V + + + G + P ++P ++ ++ + Sbjct: 561 LTYVSHDGEDKKRPVIVHRAILGSVERMIAILTENYGGKLAPFWLSPRQVMVVPVGP--- 617 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C + + + + D D G + + A L + ++VG K V I Sbjct: 618 TCDEYAQNVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKITGTVNI 677 Query: 419 KHRLTGIREDMSLEEVINYASHR 441 + R + + ++ E I Sbjct: 678 RTRDNKVHGERTISETIERLQQL 700 >gi|322392576|ref|ZP_08066036.1| proline--tRNA ligase [Streptococcus peroris ATCC 700780] gi|321144568|gb|EFX39969.1| proline--tRNA ligase [Streptococcus peroris ATCC 700780] Length = 617 Score = 199 bits (507), Expect = 6e-49, Method: Composition-based stats. Identities = 107/257 (41%), Positives = 151/257 (58%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM VP L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLVPALLSADLWRESGRYETYGEDLYKLKNRESSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG+ S EF+ +D V IPSE Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGEDSQEFMAITPARSDLDRWVVLDKSVASFDEIPSEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L +V Sbjct: 241 QEEIKAELLKWMVSGED 257 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 17/206 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGTDVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLIPVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 I L G +V DD E++G +F+ +DL+G P+++ VG K ++ VE+K Sbjct: 534 ASLALTNHIEEALVNKGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AAEGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNN 445 + TG ++ + ++ +N Sbjct: 593 IKATGDTIEVHADNLLETL-EILANK 617 >gi|315635814|ref|ZP_07891076.1| proline--tRNA ligase [Arcobacter butzleri JV22] gi|315479793|gb|EFU70464.1| proline--tRNA ligase [Arcobacter butzleri JV22] Length = 568 Score = 199 bits (507), Expect = 6e-49, Method: Composition-based stats. Identities = 99/235 (42%), Positives = 140/235 (59%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK F+P +E P DA + SH+ ++R G I Q GIY ++PLG+ L+ + I++EE Sbjct: 1 MKFSKMFIPTTKETPNDATLPSHQYLVRGGFIAQTGAGIYDFMPLGKIVLEKIRTIVKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ + LW ESGR + G EMLR DR + + PT+EE + ++ ++ Sbjct: 61 MDEAGANEVQFGFVTPLTLWQESGRATTMGAEMLRFKDRKNGEFVLSPTNEEAVVNMVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY++LP YQI KFRDE RPRFG+MR REFLMKD YSF + E +N M + Sbjct: 121 RITSYKDLPLHLYQINTKFRDEARPRFGLMRGREFLMKDGYSFHSSEEDLVREFNLMEAT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y +I+ +LGL + A+SG IGG S EF V+AD+GE + D+ E Sbjct: 181 YKKIYTKLGLDFRVVAADSGAIGGSGSKEFHVIADSGEDTLVVCDSC-DYGANIE 234 Score = 159 bits (403), Expect = 7e-37, Method: Composition-based stats. Identities = 66/180 (36%), Positives = 95/180 (52%), Gaps = 2/180 (1%) Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRV 324 E + K +GIE GHIF GTKYS M+A F +GK MG YGIG R+ Sbjct: 390 EGDICACCGGKLSYRKGIEAGHIFQLGTKYSSAMNANFLDENGKAKPFIMGCYGIGVSRL 449 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDM 384 VAAVIE +HD KG +W + APF + +I + + E++Y++L + G DD Sbjct: 450 VAAVIEQNHDDKGCVWTKATAPFMVDIIVSNSKKEEEAKVGEELYSKLKQAGISTILDDR 509 Query: 385 -GEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 + G + + +LLGFP V++G K + D VEI R T + D+ ++EVI+ Sbjct: 510 INARFGFKMSDFELLGFPYAVVIGKK-LEDGLVEIVDRKTLEKIDLKVDEVISKILELVK 568 >gi|154486903|ref|ZP_02028310.1| hypothetical protein BIFADO_00736 [Bifidobacterium adolescentis L2-32] gi|154084766|gb|EDN83811.1| hypothetical protein BIFADO_00736 [Bifidobacterium adolescentis L2-32] Length = 611 Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats. Identities = 104/284 (36%), Positives = 154/284 (54%), Gaps = 2/284 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DA++ S KL+ R + + + GI++WLPLG L+ + IIREE Sbjct: 6 RMSTMFLRTLREDPADADVVSDKLLQRACYLRKAAPGIWTWLPLGLNVLNKIENIIREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 A E+ L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 66 ASIDAQEVHFSGLLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDL 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF L EG +Y +Y Sbjct: 126 YSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTLDKEGLVKAYMDERGAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF+RL LK +P+ A +GP+GG S EF+ + GE S + + + T + Sbjct: 186 ERIFNRLDLKYVPVHAMAGPMGGFESEEFLAPMEIGEDTFAQSPSGKAWNVEALTTPEPE 245 Query: 242 II--SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 I + E+ P AAT D E + P + + + Sbjct: 246 AIDFTATPAAEKRPTPDAATIDKMVEFANANHPRSDGRDWQASD 289 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 4/189 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ RG+E+G +F G KYS + +GK V MG Sbjct: 420 GTVEAVQVRHGDMSPDGSGPLSFERGVEIGQVFQLGLKYSNALGLKVLDQNGKTVPVWMG 479 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG RV+A + E+ HD KG+ W +V + D +A E++ L Sbjct: 480 SYGIGVSRVMACIAETHHDEKGLAW-PAVIAPAQVHVVATGKDAAAFEAAEQLIGELEAK 538 Query: 376 GCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD + G +F A+L+G P+ + G V++ +E++ R E + + + Sbjct: 539 GIEVIFDDRKKVSPGVKFKDAELIGVPIIAVAGRDTVNNGTIEVRDRNGENAEAVPVADA 598 Query: 435 INYASHRFS 443 + R + Sbjct: 599 AQAIADRVA 607 >gi|238924616|ref|YP_002938132.1| threonyl-tRNA synthetase [Eubacterium rectale ATCC 33656] gi|238876291|gb|ACR75998.1| threonyl-tRNA synthetase [Eubacterium rectale ATCC 33656] Length = 676 Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats. Identities = 66/444 (14%), Positives = 148/444 (33%), Gaps = 38/444 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT-GAI 67 + + RD ++ L T + +G+ +P G K + + I + +++ G + Sbjct: 251 RMEEAKKRDHNKLGREMELFTT-VDVIGQGLPLMMPKGTKMIMKLQRWIEDLEDKEWGYV 309 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEML----RLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 P + +DL+ SG +D Y M D ++ M P ++++ Sbjct: 310 RTKTPLMAKSDLYKISGHWDHYLDGMFVLGDPEKDGEEEVMALRPMTCPFQYYVYKAKQH 369 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP+ + FR+E G+ R R+F + + ++ + + Sbjct: 370 SYRDLPYRMGETSTLFRNEDSGEMHGLTRVRQFTISEGHNVIRPDQCEEEL--------- 420 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + + + D+++ + ++ + + Sbjct: 421 ----KACFNLNRYVLKVLGLENDVTYRLSKWDPKNTEKYLGDDEYWNSTQEVLRNILIEE 476 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y D+ + ++ K + I + + Sbjct: 477 NVPFVEADGEAAFYGPKIDIQAKNVY-----GKEDTMVTI------QLDCAIAENFDLYY 525 Query: 303 KGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 +G + +G A + + GK W + P ++ ++ I + Sbjct: 526 IDQNGDKIRPYIIHRTSLGCYERTLAWLIEHYAGKFPTW---LCPEQVRVLPI---SEKY 579 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D +K+ L + DV D+ E+IG + A + P ++VG+ +D V ++ R Sbjct: 580 ADYAKKVADELKRNDVDVTVDNRAEKIGYKIREARMDKLPYMLVVGADEEADGTVSVRSR 639 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 G L + I+ Sbjct: 640 FEGNEGVKPLSDFIDQICKEIRTK 663 >gi|322377188|ref|ZP_08051680.1| proline--tRNA ligase [Streptococcus sp. M334] gi|321281901|gb|EFX58909.1| proline--tRNA ligase [Streptococcus sp. M334] Length = 617 Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats. Identities = 105/257 (40%), Positives = 148/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L +V Sbjct: 241 QEEIKAELLKWMVSGED 257 Score = 143 bits (360), Expect = 7e-32, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + ++ + + Sbjct: 593 IKATGDTIEVHADNLLETL--EILSKK 617 >gi|307709960|ref|ZP_07646407.1| prolyl-tRNA synthetase [Streptococcus mitis SK564] gi|307619331|gb|EFN98460.1| prolyl-tRNA synthetase [Streptococcus mitis SK564] Length = 617 Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats. Identities = 105/257 (40%), Positives = 148/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L +V Sbjct: 241 QEEIKAELLKWMVSGED 257 Score = 143 bits (360), Expect = 7e-32, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + ++ + + Sbjct: 593 IKATGDTIEVHADNLLETL--EILSKK 617 >gi|307708104|ref|ZP_07644572.1| prolyl-tRNA synthetase [Streptococcus mitis NCTC 12261] gi|307615889|gb|EFN95094.1| prolyl-tRNA synthetase [Streptococcus mitis NCTC 12261] Length = 617 Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats. Identities = 105/257 (40%), Positives = 148/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWVVLDKSVTSFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L +V Sbjct: 241 QEEIKAELLKWMVSGED 257 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLITVNVKDD 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + ++ + + Sbjct: 593 IKATGDTIEVHADNLLETL--EILSKK 617 >gi|289168683|ref|YP_003446952.1| prolyl-tRNA synthetase [Streptococcus mitis B6] gi|288908250|emb|CBJ23092.1| prolyl-tRNA synthetase [Streptococcus mitis B6] Length = 617 Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats. Identities = 105/257 (40%), Positives = 148/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L +V Sbjct: 241 QEEIKAELLKWMVSGED 257 Score = 143 bits (360), Expect = 7e-32, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + ++ + + Sbjct: 593 IKATGDTIEVHADNLLETL--EILSKK 617 >gi|296124433|ref|YP_003632211.1| threonyl-tRNA synthetase [Planctomyces limnophilus DSM 3776] gi|296016773|gb|ADG70012.1| threonyl-tRNA synthetase [Planctomyces limnophilus DSM 3776] Length = 736 Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats. Identities = 64/483 (13%), Positives = 119/483 (24%), Gaps = 68/483 (14%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD + +L L + + + G+ WLP G + I+ E + G + Sbjct: 252 EAKRRDHRVLGKQLNLFS-ISPEVGAGLCLWLPKGATVRALLEEFIKGELLKRGYQPVYT 310 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRND----KAMIYGPTHEEVMTDIFRSHIKSYRN 127 P + +L+ SG + Y +D + Sbjct: 311 PHIGRVELYETSGHFPYYRDSQFTPLYGHDGGQLIDFWIRKLQDN-AISEADEKSLLASA 369 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 + + V+R+ E + + Y M SY + R Sbjct: 370 KILGVEIPEYAAASGNPAKIEVLRTWEKQQERYLLKPMNCPHHAQIYKSMQRSYRDLPVR 429 Query: 188 ---LGLKSIPMR-----------------AESGPIGGDLSHEFIVL-------------- 213 G + A + EF Sbjct: 430 LAEFGTVYRHEQSGELNGMLRVRGLTQDDAHLFCTPEQVEEEFRATLQLVQFVLASVGLE 489 Query: 214 --------ADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNE 265 D + S++ S ++ + E A Y +D Sbjct: 490 DYRVQLSLRDPKSDKYVGSEENWQRAEASLRGVLTELNLPFTAREGEAAFYGPKADFM-- 547 Query: 266 KLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI--GAMR 323 + D + ++ ++ + GAD + H M R Sbjct: 548 -VKDCIGREWQLGTVQLDYNLP--------ERFQLEYVGADNQAHRPVMIHRAPFGSMER 598 Query: 324 VVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDD 383 +IE + ++ G V D Sbjct: 599 FTGMLIEHFAGAFPLWLAPEQVRVLSI-------SDKFEGYAREVEREFRAAGFRVTTDL 651 Query: 384 MGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443 G +I + A + P ++VG K + V I+ R+ G + L E I + Sbjct: 652 RGAKINGKIRDAQIELIPYMLVVGGKDQENRTVSIRDRIEGDLGAVPLAEAITRLQQEVT 711 Query: 444 NNR 446 R Sbjct: 712 EKR 714 >gi|307710999|ref|ZP_07647421.1| prolyl-tRNA synthetase [Streptococcus mitis SK321] gi|307616961|gb|EFN96139.1| prolyl-tRNA synthetase [Streptococcus mitis SK321] Length = 617 Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats. Identities = 105/257 (40%), Positives = 148/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L +V Sbjct: 241 QEEIKAELLKWMVSGED 257 Score = 142 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + ++ + + Sbjct: 593 IKATGDTIEVHADNLLETL--EILSKK 617 >gi|307128591|ref|YP_003880621.1| uracil phosphoribosyltransferase [Candidatus Sulcia muelleri CARI] gi|306483053|gb|ADM89923.1| uracil phosphoribosyltransferase [Candidatus Sulcia muelleri CARI] Length = 640 Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats. Identities = 74/442 (16%), Positives = 149/442 (33%), Gaps = 34/442 (7%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 KYFL + RD KL L T + +G+ WLP G + + + Sbjct: 228 KYFLKKKESKKRDHRKIGKKLELFT-FSNIVGQGLPIWLPKGFLLKKKIENFLLNLNQKI 286 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKE--MLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G ++ P + + L+ SG ++ Y + ++ ++ + + +I+ Sbjct: 287 GYEMVTTPHIANKKLYNISGHWEKYYENSFNTFISPNKEEQFLLKSMNCPHHCEIYNYKK 346 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP F + +R E G+ R R F DA+ F + + + Sbjct: 347 FSYKDLPKRFAEFGTVYRYEKSGELHGLTRVRSFTQDDAHIFCTKEQLIEEL-KSVIDMI 405 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + IF +LG + + SK+ + + Sbjct: 406 IFIFQKLGFSKYKAQISLRDKKKK-------------YKYIGSKEHWEKSEKDLIKATKE 452 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I A Y D + D L N ++ ++ F Y+ Sbjct: 453 KKIDTYIKYGEAAFYGPKLDFM---VQDILGRNWQLGTVQVDYNLPERFNLFYTN----- 504 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + + + +G++ A++ + +G +W + I ++ + Sbjct: 505 --NKNKLIRPIMIHRATLGSLERFIAILIENTEGNFPLWLSPIPIRIIPIL------EKN 556 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +KI L ++ F D E + + A++ PL +++G K + V I+ Sbjct: 557 FFYSKKILNLLMQLEIQSFIDSRIESLSKKIIDAEIDKIPLILVLGDKEEKLNSVSIRSY 616 Query: 422 LTGIREDMSLEEVINYASHRFS 443 +SLE IN+ + Sbjct: 617 KEKKIIFLSLERFINFLKKEIN 638 >gi|303310925|ref|XP_003065474.1| threonyl-tRNA synthetase, cytoplasmic, putative [Coccidioides posadasii C735 delta SOWgp] gi|240105136|gb|EER23329.1| threonyl-tRNA synthetase, cytoplasmic, putative [Coccidioides posadasii C735 delta SOWgp] gi|320034634|gb|EFW16577.1| threonyl-tRNA synthetase [Coccidioides posadasii str. Silveira] Length = 757 Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats. Identities = 75/472 (15%), Positives = 134/472 (28%), Gaps = 64/472 (13%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E R+ + L + S G LP G K + + ++R E + G Sbjct: 312 LKFLEEAEKRNHLKIGKEQELF--FFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRKRGY 369 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG ++ Y +M +LA + P + +F +SYR Sbjct: 370 QEVQSPNMYDVGLWRTSGHWNHYKDDMFKLA-VEKREWALKPMNCPGHCIMFNHRERSYR 428 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP + R+E G+ R R+F D + F + ++ +F I+ Sbjct: 429 ELPLRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTEDQITQE-IEGLFDFLRAIY 487 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G ++ + P E A+ + D Sbjct: 488 GLFGFSF-KLKLSTRPEKYLGKLETWDFAEAQLKEALTRFKGSD---------------- 530 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT---- 301 I E A Y D+ + D+L + + ++ F +Y A Sbjct: 531 WEIDEGDGAFYGPKIDI---TIQDALKREFQCATIQLDYQLPQNFKLEYMTNEIAKPKAP 587 Query: 302 -----------------------FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 G + + R +IE Sbjct: 588 EPKKEESGPREGGDSKAADSDDGVPGPGRARPVMIHRAIIGSFERFFGILIEHFGGKWPF 647 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + D E++ L +V D G + + L Sbjct: 648 WLSPRQILIVPVMP-------AVYDYVEELQGILRGDKLNVDIDVSGNTLQKKIRNGQLA 700 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIRED----MSLEEVINYASHRFSNNR 446 + +VG++ V I++R + + L E R Sbjct: 701 QYNFIFVVGAQEKETRTVNIRNRDDPSSQAKGSLVPLNEAREKLRALRKERR 752 >gi|213405351|ref|XP_002173447.1| prolyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275] gi|212001494|gb|EEB07154.1| prolyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275] Length = 418 Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats. Identities = 134/440 (30%), Positives = 213/440 (48%), Gaps = 45/440 (10%) Query: 2 RRSKYFLPILQENPRDAEIASH--KLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE 59 R S+ L+E+ ++ + + L++ G + Q S G++ LPLG + +DN++ I+ + Sbjct: 8 RASQLL---LKESGKNYVVPKNVSSLLIDQGYVQQSSSGVFQLLPLGLRVMDNISNIVHQ 64 Query: 60 EQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFR 119 E GAI +S+ +L + +W +S R++ G EML + DR + PTHEE MT + Sbjct: 65 ELAGLGAIRVSLASLSAKAVWQQSKRWEKMGSEMLHIRDRAQRDYCLCPTHEEEMTRMVA 124 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 + S + LP + YQI K+RDE RPR G++R++EFLM D Y++D T E ++ +Y ++F Sbjct: 125 NVFHSSKQLPISVYQIGSKYRDEARPRGGLLRAKEFLMMDLYTYDATKEAAEKTYERVFQ 184 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 S+ RIF +GL A+ G +GG SHEF L + GE V + Sbjct: 185 SFHRIFRAIGLPYTVAEAQQGTMGGAYSHEFHYLNEVGEDVVLRCPQCL----------- 233 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 A T H + + + IEVGH F G Y+ P Sbjct: 234 ---------------HAANTDAYHGSIDKCVHCGGELLQQKCIEVGHTFNLGQTYTRPFQ 278 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + M SYGIG R++AAV +HD KG++WP ++AP+KI ++ A D Sbjct: 279 LCLSN----GDALYMNSYGIGISRLLAAVAHMTHDEKGLVWPTAIAPWKIIILP--ASDS 332 Query: 360 VCRDACEKIYARLS----KVGCDVFWDDMG-EQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 D E +Y L+ DD G + G + A+L+GFP + VG + D Sbjct: 333 KIPD-AEALYDSLAQTFGANNI--LLDDRGHKSYGRKIRDAELIGFPFIITVGESYTRDG 389 Query: 415 KVEIKHRLTGIREDMSLEEV 434 ++ R + R + ++ Sbjct: 390 SFDVLARASNTRYKLKAAQL 409 >gi|229825871|ref|ZP_04451940.1| hypothetical protein GCWU000182_01235 [Abiotrophia defectiva ATCC 49176] gi|229789891|gb|EEP26005.1| hypothetical protein GCWU000182_01235 [Abiotrophia defectiva ATCC 49176] Length = 604 Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats. Identities = 76/466 (16%), Positives = 152/466 (32%), Gaps = 59/466 (12%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K L +++E RD + KL L M ++ + G+ WLP G + + R+ + Sbjct: 170 KAHLNLIREALERDHKKLGPKLDLF--MFNETAPGMPYWLPRGWRLYQELINFWRKIHVK 227 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEML---------------RLADRNDKAMIYGP 108 G E+S P + + LW+ SG + Y M + +D P Sbjct: 228 HGYQEISAPIINNRKLWLISGHWAHYVNNMFIIPGFDDDLTQRTLQNIELDSDSTFAAKP 287 Query: 109 THEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTP 167 + ++ + SY+ LP + +I + R E + G+ R +EF D ++F + Sbjct: 288 MNCPNAMLTYKRTVHSYKELPIRYNEIDVIHRKEKSGQLNGLFRVQEFRQDDDHTFVM-E 346 Query: 168 EGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 + + +I+ G+ + P E A+ ++ K Sbjct: 347 SQIEEEIADVMEVADQIYSTFGITY-RAELSTRPEDFMGDIEVWDRAEAALKKILDKKYG 405 Query: 228 MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 + E A Y D+ ++ D+L + ++ Sbjct: 406 E---------------GGYEVNEGDGAFYGPKIDL---QMKDALGREWQCGTIQLDFQLP 447 Query: 288 FYFGTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAP 346 F T++ +DG + G+ ++ ++ G+ W Sbjct: 448 HNF--------ELTYQDSDGTIKEPVVIHRAIFGSFERFIGILIENYKGEFPFW------ 493 Query: 347 FKISLINIKAHDQVCRDACEKIYARLSKVGCDVF--WDDMGEQIGSQFAVADLLGFPLQV 404 + I + ++I L ++G V +DD + + L+ P + Sbjct: 494 ISPYQVAIVPIRTEHNEYAKEIEDALYEMGIRVEANYDDKN--MNEKIKGFKLMKDPYII 551 Query: 405 IVGSKFVSDSKVEIKHRLTGIR-EDMSLEEVINYASHRFSNNRPVL 449 +VG K + V I R + + L+ L Sbjct: 552 VVGDKEKEERTVSITVRGQKQQMHGVPLDTFYKMIRKLQDTKAQEL 597 >gi|116495061|ref|YP_806795.1| prolyl-tRNA synthetase [Lactobacillus casei ATCC 334] gi|122263522|sp|Q038L9|SYP_LACC3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116105211|gb|ABJ70353.1| Prolyl-tRNA synthetase [Lactobacillus casei ATCC 334] gi|327382602|gb|AEA54078.1| Prolyl-tRNA synthetase [Lactobacillus casei LC2W] gi|327385800|gb|AEA57274.1| Prolyl-tRNA synthetase [Lactobacillus casei BD-II] Length = 575 Score = 199 bits (506), Expect = 8e-49, Method: Composition-based stats. Identities = 111/281 (39%), Positives = 161/281 (57%), Gaps = 7/281 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ F+P +E P AE SHK+MLR+G + Q G+Y++LPL ++ L + AII +E Sbjct: 1 MKQSRMFIPTEKEVPSSAEAKSHKMMLRSGFVRQIQAGVYAYLPLAERVLARIEAIIDDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A++M +P L A+LW ESGRY++YG + +L +R D+ MI GPTHEE TD+ R+ Sbjct: 61 MTKIDAVKMKMPVLLPAELWEESGRYETYGPNLFKLKNRQDRKMILGPTHEETFTDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ +P YQIQ KFRDE RPR+GV+R REF+M+DAYSF + Y +M + Sbjct: 121 ELKSYKRMPLVLYQIQDKFRDEDRPRYGVLRGREFIMQDAYSFTSNDQDLDTIYRQMEHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL+ + + G +GG S EF +AD GE + S D+ E Sbjct: 181 YTNIFDRLGLRYRSIIGDGGAMGGKDSKEFSAIADIGEDTIVYSDS-SDYAANLE--MAT 237 Query: 241 DIISLNSIVEQWTAPYAAT----SDVHNEKLFDSLPENKRV 277 + VE+ A + F +PE K + Sbjct: 238 SMALPKQGVEEQAALEPVDTKDAKTIAEVAEFLKVPEKKLI 278 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 67/182 (36%), Positives = 100/182 (54%), Gaps = 3/182 (1%) Query: 260 SDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ + P+ + V RGIE+GHIF GT+Y+ M A F +G+ + MGSY Sbjct: 382 ADIRFVTEGEVSPDGQGVLKFTRGIEIGHIFKLGTRYTETMGANFLDENGRSQPIIMGSY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A+ E D G++WP ++APF I LI + + + I L G Sbjct: 442 GIGVSRLLSAIAEQQADEHGLVWPTTIAPFDIHLIPVNLKREEQKSLTASIETMLEVAGY 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 V DD E+ G +FA +DL+G PL+V VG K V + VE+K R TG ++ EE+I+ Sbjct: 502 SVLVDDRNERPGVKFADSDLIGVPLRVTVGKKAVDE-IVELKLRKTGETIEVKKEELISS 560 Query: 438 AS 439 Sbjct: 561 IK 562 >gi|227534928|ref|ZP_03964977.1| prolyl-tRNA synthetase (proline--tRNA ligase) (ProRS) [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187684|gb|EEI67751.1| prolyl-tRNA synthetase (proline--tRNA ligase) (ProRS) [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 575 Score = 199 bits (506), Expect = 8e-49, Method: Composition-based stats. Identities = 109/279 (39%), Positives = 159/279 (56%), Gaps = 3/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ F+P +E P AE SHK+MLR+G + Q G+Y++LPL ++ L + AII +E Sbjct: 1 MKQSRMFIPTEKEVPSSAEAKSHKMMLRSGFVRQIQAGVYAYLPLAERVLARIEAIIDDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A++M +P L A+LW ESGRY++YG + +L +R D+ MI GPTHEE TD+ R+ Sbjct: 61 MTKIDAVKMKMPVLLPAELWEESGRYETYGPNLFKLKNRQDRKMILGPTHEETFTDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ +P YQIQ KFRDE RPR+GV+R REF+M+DAYSF + Y +M + Sbjct: 121 ELKSYKRMPLVLYQIQDKFRDEDRPRYGVLRGREFIMQDAYSFTSNDQDLDTIYRQMEHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL+ + + G +GG S EF +AD GE + S D+ E Sbjct: 181 YTNIFDRLGLRYRSIIGDGGAMGGKDSKEFSAIADIGEDTIVYSDS-SDYAANLEMATSM 239 Query: 241 DIISLNSIVEQWTAPYAATS--DVHNEKLFDSLPENKRV 277 + + P + F +PE K + Sbjct: 240 ALPKQGVEEKAALEPVDTKDAKTIAEVAEFLKVPEKKLI 278 Score = 153 bits (386), Expect = 6e-35, Method: Composition-based stats. Identities = 67/182 (36%), Positives = 100/182 (54%), Gaps = 3/182 (1%) Query: 260 SDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ + P+ + V RGIE+GHIF GT+Y+ M A F +G+ + MGSY Sbjct: 382 ADIRFVTEGEVSPDGQGVLKFTRGIEIGHIFKLGTRYTETMGANFLDENGRSQPIIMGSY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A+ E D G++WP ++APF I LI + + + I L G Sbjct: 442 GIGVSRLLSAIAEQQADEHGLVWPTTIAPFDIHLIPVNLKREEQKSLTASIETMLEVAGY 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 V DD E+ G +FA +DL+G PL+V VG K V + VE+K R TG ++ EE+I+ Sbjct: 502 SVLVDDRNERPGVKFADSDLIGVPLRVTVGKKAVDE-IVELKLRKTGETIEVKKEELISS 560 Query: 438 AS 439 Sbjct: 561 IK 562 >gi|291525280|emb|CBK90867.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Eubacterium rectale DSM 17629] gi|291529262|emb|CBK94848.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Eubacterium rectale M104/1] Length = 657 Score = 199 bits (506), Expect = 8e-49, Method: Composition-based stats. Identities = 64/444 (14%), Positives = 143/444 (32%), Gaps = 38/444 (8%) Query: 9 PILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT-GAI 67 + + RD ++ L T + +G+ +P G K + + I + +++ G + Sbjct: 232 RMEEAKKRDHNKLGREMELFTT-VDVIGQGLPLMMPKGTKMIMKLQRWIEDLEDKEWGYV 290 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEML----RLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 P + +DL+ SG +D Y M D ++ M P ++++ Sbjct: 291 RTKTPLMAKSDLYKISGHWDHYLDGMFVLGDPEKDGEEEVMALRPMTCPFQYYVYKAKQH 350 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP+ + FR+E G+ R R+F + + ++ + + Sbjct: 351 SYRDLPYRMGETSTLFRNEDSGEMHGLTRVRQFTISEGHNVIRPDQCEEEL--------- 401 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + + + D+++ + ++ + + Sbjct: 402 ----KACFNLNRYVLKVLGLENDVTYRLSKWDPKNTEKYLGDDEYWNSTQEVLRNILIEE 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y D+ + ++ K + I + + Sbjct: 458 NVPFVEADGEAAFYGPKIDIQAKNVY-----GKEDTMVTI------QLDCAIAENFDLYY 506 Query: 303 KGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 +G + +G A + + GK W + + + Sbjct: 507 IDQNGDKIRPYIIHRTSLGCYERTLAWLIEHYAGKFPTWLCPEQVRVLPI------SEKY 560 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D +K+ L + DV D+ E+IG + A + P ++VG+ +D V ++ R Sbjct: 561 ADYAKKVADELKRNDVDVTVDNRAEKIGYKIREARMDKLPYMLVVGADEEADGTVSVRSR 620 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 G L + I+ Sbjct: 621 FEGNEGVKPLSDFIDQICKEIRTK 644 >gi|147835149|emb|CAN65674.1| hypothetical protein VITISV_002009 [Vitis vinifera] Length = 1260 Score = 199 bits (506), Expect = 8e-49, Method: Composition-based stats. Identities = 71/416 (17%), Positives = 129/416 (31%), Gaps = 57/416 (13%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L +E R D L L + I + G+ W P G + ++ Sbjct: 269 KAYLHFKEEAKRRDHRRLGQDLDLFS--IQDEAGGGLVFWHPKGAIVRHIIEDSWKKIHI 326 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + P + ADLW SG D Y + M D+ P + I++ + Sbjct: 327 EHXYDLLYTPHVARADLWKTSGHLDFYRENMYSQITIEDELYQLRPMNCPYHILIYKRKL 386 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+ P ++ + EL G+ R R F DA+ F L + + Sbjct: 387 HSYRDFPIRVAELGTVYXYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDE-IRGVLDLT 445 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 I + G + + P + + D + + DD Sbjct: 446 EEILLQFGFSKYEVNLSTRP-----------------EKAVGADDIWEKATSALRDALDD 488 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 I E A Y D+ K+ D+L + S Sbjct: 489 KGWSYRIDEGGGAFYGPKIDL---KIEDALGRKWQCSTIQ-------------------- 525 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 K + + +G++ V+ + +P ++P + ++ + Sbjct: 526 ----AKKQRPIMIHRAVLGSLERFFGVLI---EHYAGDFPLWLSPIQARVLPVT---DTQ 575 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + C ++ +L G GE++ ++ PL +VG K V V Sbjct: 576 LEYCNEVTNKLKANGIRAEV-CHGERLPKLIRNSEKQRIPLMAVVGPKEVETQTVT 630 >gi|119499848|ref|XP_001266681.1| threonyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181] gi|119414846|gb|EAW24784.1| threonyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181] Length = 737 Score = 199 bits (506), Expect = 8e-49, Method: Composition-based stats. Identities = 76/461 (16%), Positives = 144/461 (31%), Gaps = 42/461 (9%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ + L L+E R+ L + S G LP G K + + A++R E Sbjct: 298 KQMQEHLKFLEEAEKRNHLRIGKDQELF--FFDEVSPGCPFLLPNGTKIFNALQALLRAE 355 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + +W SG + Y +M +L D + P + +F Sbjct: 356 YRKRGYQEVQTPNMYDVGIWKRSGHWAHYKDDMFKL-DVEKREWALKPMNCPGHFVLFGH 414 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SYR LP + R+E G+ R R+F D + F + + +F Sbjct: 415 RERSYRELPLRIADFGVLHRNEASGALSGLTRVRKFQQDDTHIFCTQDQIASE-IEGLFD 473 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 I+ G ++ + P + + ++ + Sbjct: 474 FLQSIYGLFGFTF-KLKLSTRP-----------------EKYLGELETWNYAEEQLKSAM 515 Query: 240 DDIISLNSIV-EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTKYSL 296 + + E A Y D+ + D+L + + ++ F + Sbjct: 516 TKFKGKDWTIDEGDGAFYGPKIDI---TIADALKREFQCATIQLDYQAPINFKLEYMTNE 572 Query: 297 PMSATFKGADGKDHYVQMGSYGIGAMRV---VAAVIESSHDGKGIIWPDSVAPFKISLIN 353 A + + G G R A+I S GI+ + + Sbjct: 573 KGQA-VMEESKTEGETKSNEPGPGRARPVVIHRAIIGSFERFLGILIEHFGGKWPFWISP 631 Query: 354 ----IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSK 409 I D E++ L +V D G + + L + +VG++ Sbjct: 632 RQILIVPVMPAVNDYVEELQQILRGDKLNVDIDISGNTMQKKIRTGQLAQYNFIFVVGAQ 691 Query: 410 FVSDSKVEIKHRLTGIRED----MSLEEVINYASHRFSNNR 446 V I++R ++ + LEE R Sbjct: 692 EKESRSVNIRNRDDPATQNKGVMVPLEEARQKLRALRKERR 732 >gi|57242133|ref|ZP_00370073.1| prolyl-tRNA synthetase [Campylobacter upsaliensis RM3195] gi|57017325|gb|EAL54106.1| prolyl-tRNA synthetase [Campylobacter upsaliensis RM3195] Length = 568 Score = 199 bits (506), Expect = 8e-49, Method: Composition-based stats. Identities = 114/358 (31%), Positives = 167/358 (46%), Gaps = 14/358 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+++ P +E P+DA + SH + R G I Q+ G+Y++LPLG+ + II+EE Sbjct: 1 MKFSQFYAPTFKEAPKDATLPSHIFLTRAGFIEQNGSGLYNFLPLGKMVYSKIENIIKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+E S+ A W ESGRY+ +GKE+LR DR + + GPTHEE M ++ ++ Sbjct: 61 MDKAGALETSLSFTTPASFWQESGRYNVFGKELLRFKDRKENDFVLGPTHEEAMLNVVKN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REF+MKDAYSF E + M + Sbjct: 121 KITSYKQLPLNLYQIGLKFRDEARPRFGLLRCREFVMKDAYSFHKDEEDLTREFENMQGT 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I RL L + A+SG IGG S EF+VLA GE + D+ E Sbjct: 181 YSKILKRLELDFRIVEADSGAIGGSGSKEFMVLAQNGEDDILLCSHC-DYAANIEAA--- 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 E+ A +A+ + K L E I F T ++ A Sbjct: 237 KRAKKTCEKERPEANFASKFHTPDVKTIKGL----------AEFFKIDSFYTIKAVVKKA 286 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 ++ + G + + A + I + Sbjct: 287 LYENETKLVAFFVRGCDDLQETKAQNACKALELVDADEEELREAGLKPGFIGFINLKN 344 Score = 137 bits (346), Expect = 3e-30, Method: Composition-based stats. Identities = 62/232 (26%), Positives = 106/232 (45%), Gaps = 6/232 (2%) Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTA---PYAATSDVHNEKLFDSLP 272 G + ++D + E ++ D+ K D Sbjct: 337 IGFINLKNVDFYIDNELKDEKQMIMGANEIDYHFVGIDVVNLNEERFKDLVEVKEGDCCA 396 Query: 273 EN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 + K ++GIEVGHIF GTKYS M ATF +GK MG YG+G R+VA +E Sbjct: 397 KCGAKLTKSKGIEVGHIFKLGTKYSAAMQATFLDENGKAKPFVMGCYGMGVSRLVAVAVE 456 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 +S D +GI+W ++++PFK+ +I D+ + +Y L K+G +V DD E+ G Sbjct: 457 ASFDERGIVWQEALSPFKLVIILSNIKDEKALNLGISLYEDLRKLGINVLLDDRNERYGV 516 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 + +L+GF +I+G K + ++++E+ R + + + + Sbjct: 517 KMNDFELMGFNYALIIG-KSLENNELELVKRKDLSKIKLKADTALIELKKVL 567 >gi|307103531|gb|EFN51790.1| hypothetical protein CHLNCDRAFT_56367 [Chlorella variabilis] Length = 594 Score = 199 bits (506), Expect = 8e-49, Method: Composition-based stats. Identities = 69/438 (15%), Positives = 138/438 (31%), Gaps = 36/438 (8%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + RD +L L + I++ G+ W P G V + + G + Sbjct: 190 EEAALRDHRRLGQELDLFS--INEACGGGLVFWHPKGAMVRHLVEDFWKSIHLQYGYHLL 247 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P + DLW SG +D Y M D P + I++ SYR+LP Sbjct: 248 FTPHIAKVDLWKTSGHFDFYRDSMFNQMD-------LKPMNCPFHITIYKQGYYSYRDLP 300 Query: 130 FTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + ++ +R E L +D P + + + + G Sbjct: 301 IKWAELGTVYRYERSGTMHG------LFRDDAHIFCLPTQIEAEILGVLDLTELLLSQFG 354 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 + P V T + S + D + + Sbjct: 355 FHDFEASCKRKPPPRPC---LQVNLSTRPDKFVGSPEIWDQAEHALKAALQRKGWAFAED 411 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ K+ D++ + S ++ F ++ + A+ K+ Sbjct: 412 VGGGAFYGPKIDI---KICDAIGRKWQCSTVQLD----FNLPERFDMFY---ISDANIKE 461 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + + +G++ ++ + +P +AP + L+ + + Sbjct: 462 RPIMIHRAILGSLERFMGILI---ENYAGAFPLWLAPVQCRLVPVN---DAVMGYVSGVA 515 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM 429 L G V G +G A+ P+ +VG + S V ++ G M Sbjct: 516 QALQAAGLRVEV-SSGLSVGKAIRAAEKDKIPVMCVVGQREASAGTVAVRTYSHGDVGCM 574 Query: 430 SLEEVINYASHRFSNNRP 447 +E+++ + +N +P Sbjct: 575 LVEDLVERMAKASANKQP 592 >gi|301066624|ref|YP_003788647.1| prolyl-tRNA synthetase [Lactobacillus casei str. Zhang] gi|300439031|gb|ADK18797.1| Prolyl-tRNA synthetase [Lactobacillus casei str. Zhang] Length = 575 Score = 199 bits (506), Expect = 8e-49, Method: Composition-based stats. Identities = 111/281 (39%), Positives = 161/281 (57%), Gaps = 7/281 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ F+P +E P AE SHK+MLR+G + Q G+Y++LPL ++ L + AII +E Sbjct: 1 MKQSRMFIPTEKEVPSSAEAKSHKMMLRSGFVRQIQAGVYAYLPLAERVLARIEAIIDDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A++M +P L A+LW ESGRY++YG + +L +R D+ MI GPTHEE TD+ R+ Sbjct: 61 MTKIDAVKMKMPVLLPAELWEESGRYETYGPNLFKLKNRQDRKMILGPTHEETFTDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ +P YQIQ KFRDE RPR+GV+R REF+M+DAYSF + Y +M + Sbjct: 121 ELKSYKRMPLVLYQIQDKFRDEDRPRYGVLRGREFIMQDAYSFTSNDQDLDTIYRQMEHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL+ + + G +GG S EF +AD GE + S D+ E Sbjct: 181 YTNIFDRLGLRYRSIIGDGGAMGGKDSKEFSAIADIGEDTIVYSDS-SDYAANLE--MAT 237 Query: 241 DIISLNSIVEQWTAPYAAT----SDVHNEKLFDSLPENKRV 277 + VE+ A + F +PE K + Sbjct: 238 SMALPKQGVEEQAALEPVDTKDAKTIAEVAEFLKVPEKKLI 278 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 67/182 (36%), Positives = 100/182 (54%), Gaps = 3/182 (1%) Query: 260 SDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ + P+ + V RGIE+GHIF GT+Y+ M A F +G+ + MGSY Sbjct: 382 ADIRFVTEGEVSPDGQGVLKFTRGIEIGHIFKLGTRYTETMGANFLDENGRSQPIIMGSY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A+ E D G++WP ++APF I LI + + + I L G Sbjct: 442 GIGVSRLLSAIAEQQADEHGLVWPTTIAPFDIHLIPVNLKREEQKSLTASIETMLEDAGY 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 V DD E+ G +FA +DL+G PL+V VG K V + VE+K R TG ++ EE+I+ Sbjct: 502 SVLVDDRNERPGVKFADSDLIGVPLRVTVGKKAVDE-IVELKLRKTGETIEVKKEELISS 560 Query: 438 AS 439 Sbjct: 561 IK 562 >gi|119194837|ref|XP_001248022.1| threonyl-tRNA synthetase, cytoplasmic [Coccidioides immitis RS] Length = 757 Score = 199 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 75/472 (15%), Positives = 134/472 (28%), Gaps = 64/472 (13%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E R+ + L + S G LP G K + + ++R E + G Sbjct: 312 LKFLEEAEKRNHLKIGKEQELF--FFDEVSPGCPFLLPNGTKIFNALQKLLRTEYRKRGY 369 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG ++ Y +M +LA + P + +F +SYR Sbjct: 370 QEVQSPNMYDVGLWRTSGHWNHYKDDMFKLA-VEKREWALKPMNCPGHCIMFNHRERSYR 428 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP + R+E G+ R R+F D + F + ++ +F I+ Sbjct: 429 ELPLRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTEDQITQE-IEGLFDFLRAIY 487 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G ++ + P E A+ + D Sbjct: 488 GLFGFSF-KLKLSTRPEKYLGKLETWDFAEAQLKEALTRFKGSD---------------- 530 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT---- 301 I E A Y D+ + D+L + + ++ F +Y A Sbjct: 531 WEIDEGDGAFYGPKIDI---TIQDALKREFQCATIQLDYQLPQNFKLEYMTNEIAKPKAP 587 Query: 302 -----------------------FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 G + + R +IE Sbjct: 588 EPKKEESGPREGGDSKAADSDDGVPGPGRARPVMIHRAIIGSFERFFGILIEHFGGKWPF 647 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + D E++ L +V D G + + L Sbjct: 648 WLSPRQILIVPVMP-------AVYDYVEELQGILRGDKLNVDIDVSGNTLQKKIRNGQLA 700 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIRED----MSLEEVINYASHRFSNNR 446 + +VG++ V I++R + + L E R Sbjct: 701 QYNFIFVVGAQEKETRTVNIRNRDDPSSQAKGSLVPLNEAREKLRALRKERR 752 >gi|328855773|gb|EGG04898.1| hypothetical protein MELLADRAFT_37217 [Melampsora larici-populina 98AG31] Length = 687 Score = 199 bits (505), Expect = 9e-49, Method: Composition-based stats. Identities = 68/445 (15%), Positives = 139/445 (31%), Gaps = 47/445 (10%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD L H+ S G WLP G + + + ++ E + G E+ Sbjct: 276 LEEAAKRDHRKIGKDQELF--FFHEMSPGSCFWLPHGTRIYNTLVEFLKSEYRKRGYDEV 333 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P + ++ LW SG +++Y + M +L + P + IF S +SYR LP Sbjct: 334 ISPNMYNSKLWNTSGHWENYSENMFKLEIEKET-FALKPMNCPGHCLIFGSKDRSYRELP 392 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 + R+E G+ R R F DA+ F T + +F ++ L Sbjct: 393 LRMADFGVVHRNEASGALSGLTRVRRFCQDDAHHFCTTDQIDSE-VAGIFDFLKTVYGML 451 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL--N 246 G ++ + P + ++ D + Sbjct: 452 GFTY-KLKLSTRP-----------------DNYIGDLAVWNEAEKRLSSALDKFVGPGEW 493 Query: 247 SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGAD 306 + A Y D+ + D+L + + ++ F ++ L Sbjct: 494 DVDPGDGAFYGPKIDI---TISDALKRRHQCATIQLD----FQLPERFKLQYR---TDQG 543 Query: 307 GKDHYVQMGSYGIGAMRVVAAVIESSH-DGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 + V + +G++ A++ + Sbjct: 544 ERKRPVMIHRAIMGSVERFTAILTEHFGGKWPFWLSPRQVLVIPVAAT-------HKAYA 596 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT-- 423 +++ +L G D + + ++ + ++VGS+ V V ++ Sbjct: 597 QEVAQKLWDAGLYADADMTDATLPKKIRNGEVSSYNFIIVVGSEEVESRSVNVRSADDVG 656 Query: 424 --GIREDMSLEEVINYASHRFSNNR 446 G + + LEE + R Sbjct: 657 QKGKAQALPLEETLEKFILLKDQRR 681 >gi|255947314|ref|XP_002564424.1| Pc22g03830 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591441|emb|CAP97671.1| Pc22g03830 [Penicillium chrysogenum Wisconsin 54-1255] Length = 741 Score = 199 bits (505), Expect = 9e-49, Method: Composition-based stats. Identities = 76/457 (16%), Positives = 139/457 (30%), Gaps = 49/457 (10%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E R+ + L + S G LP G K + + +++R E + G Sbjct: 311 LKFLEEAEKRNHLRIGKEQELF--FFDEASPGCPFLLPNGTKIFNQLQSLLRSEYRKRGY 368 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + +W SG + Y +M +L D + P + +F +SYR Sbjct: 369 QEVQTPNMYDVGVWKTSGHWAHYKDDMFKL-DVEKREWALKPMNCPGHFILFGHRERSYR 427 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP + R+E G+ R R+F D + + + +F I+ Sbjct: 428 ELPMRIADFGVLHRNEASGALSGLTRCRKFQQDDCHVVLASHQIMSE-VEGLFDFLQSIY 486 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G ++ + P + E A+ + D+ I Sbjct: 487 GLFGFTF-KLKLSTRPEKYMGALETWDHAEDQLKKALTKFKGDDWTIN------------ 533 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTKYSLPMSATFK 303 E A Y D+ + D++ + + ++ F A Sbjct: 534 ----EGDGAFYGPKIDI---TIADAIQREFQCATIQLDYQAPINFKMEYMTKEQSQAEQP 586 Query: 304 GA---------DGKDHYVQMGSYGIGAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 G+ V + IG+ R + +IE + Sbjct: 587 KEGETKGDELAPGRARPVVIHRAIIGSFERFLGILIEHFGGKWPFWISPRQILIVPVMPA 646 Query: 354 IKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD 413 + D E++ L V D G + + L + +VG+ Sbjct: 647 VN-------DYAEELQKILQGDKLSVDIDISGNTMQKKIRTGQLAQYNFIFVVGASERET 699 Query: 414 SKVEIKHRL---TGIRE-DMSLEEVINYASHRFSNNR 446 V +++R T + + LEEV R Sbjct: 700 RSVNVRNRDDPATQKQGVMVPLEEVRIKLKALRKERR 736 >gi|307704119|ref|ZP_07641047.1| prolyl-tRNA synthetase [Streptococcus mitis SK597] gi|307622341|gb|EFO01350.1| prolyl-tRNA synthetase [Streptococcus mitis SK597] Length = 617 Score = 199 bits (505), Expect = 9e-49, Method: Composition-based stats. Identities = 105/257 (40%), Positives = 148/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L +V Sbjct: 241 QEEIKAELLKWMVSGED 257 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLITVNIKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEANLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ ++ ++ + + Sbjct: 593 IKATGDTIEVHVDNLLETL--EILSKK 617 >gi|67538984|ref|XP_663266.1| hypothetical protein AN5662.2 [Aspergillus nidulans FGSC A4] gi|40743565|gb|EAA62755.1| hypothetical protein AN5662.2 [Aspergillus nidulans FGSC A4] gi|259484865|tpe|CBF81451.1| TPA: threonyl-tRNA synthetase, putative (AFU_orthologue; AFUA_4G13700) [Aspergillus nidulans FGSC A4] Length = 722 Score = 199 bits (505), Expect = 9e-49, Method: Composition-based stats. Identities = 75/455 (16%), Positives = 139/455 (30%), Gaps = 42/455 (9%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E R+ + + L S G LP G + + + +++R E + G Sbjct: 289 LKFLEEAEKRNHLRIAKEQELF--FFDDVSPGCPFLLPNGVRIFNALQSLLRSEYRKRGY 346 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + +W SG + Y +M +L D + P + +F +SYR Sbjct: 347 QEVQTPNMYDVGIWKTSGHWAHYKDDMFKL-DVEKREWALKPMNCPGHFVLFGHRERSYR 405 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP + R+E G+ R R+F D + F + +F I+ Sbjct: 406 ELPLRIADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTHDQIESE-IEGLFDFLQSIY 464 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G ++ + P + + ++ Sbjct: 465 GLFGFTF-KLKLSTRP-----------------EKYLGELETWNYAEEQLKKAMTKFKGD 506 Query: 246 NSIV-EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTKYSLPMSATF 302 + + E A Y D+ + D+L + + ++ F AT Sbjct: 507 DWTIDEGDGAFYGPKIDI---TIADALKREFQCATIQLDYQAPLNFKLEYMTGEKTQAT- 562 Query: 303 KGADGKDHYVQMGSYGIGAMRV---VAAVIESSHDGKGIIWPDSVAPFKISLIN----IK 355 + K+ + G R A+I S GII + + I Sbjct: 563 QEEAKKEADPKSNEPAPGRARPVVIHRAIIGSFERFLGIITEHFGGKWPFWISPRQVLIV 622 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 D ++ L V D G + + L + ++VG++ Sbjct: 623 PVMPAVNDYAREVQKILQNDKLYVDVDVTGNTLQKKIRTGQLAQYNFILVVGAEEKESRS 682 Query: 416 VEIKHRLTGIRED----MSLEEVINYASHRFSNNR 446 V I++R + + LEE R Sbjct: 683 VNIRNRDDTSSQSRGVVVPLEEARQKFRALRKERR 717 >gi|261417283|ref|YP_003250966.1| prolyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373739|gb|ACX76484.1| prolyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327884|gb|ADL27085.1| proline--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 564 Score = 199 bits (505), Expect = 9e-49, Method: Composition-based stats. Identities = 99/227 (43%), Positives = 147/227 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SKYF L+E P DA + SH ++R G I S GIYS +P+G + + + IIREE Sbjct: 1 MKLSKYFYVTLRETPSDATMPSHIFLMRGGYIKPVSTGIYSMMPIGYRVIQKIVNIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 N+ G IE+ +P +Q+A+LW ESGRY + G+E+LR DRN+ M+ THEE MTD+ R Sbjct: 61 MNKIGGIEVDLPVVQTAELWSESGRYQAIGEELLRFKDRNNHNMVLAMTHEEAMTDLVRY 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQ + K+RDE R R G++R REFLMKDAYSF + E Y + + + Sbjct: 121 VLNSYKQLPVMLYQFKTKYRDEARARGGLIRVREFLMKDAYSFHTSQEDLDRHYQEEYDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 YLRI+ R+G++ + +++++G +GG ++HEF++ GE + K Sbjct: 181 YLRIYRRVGIEPVVVQSDTGIMGGKVAHEFMLDTPNGEDYLILCKKC 227 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 99/201 (49%), Gaps = 1/201 (0%) Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + + A +E RGIE+G+IF GTK+S M A F Sbjct: 365 KHCNPKRDFPKFEVADIAEASEVCKCPCCGELLTETRGIEMGNIFKLGTKFSESMGAKFL 424 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 A+ MG YGIG R++A+V+E+SHD G IWP S+APF++ ++ I + + Sbjct: 425 TAEKTTAPAIMGCYGIGVGRLMASVVENSHDDFGPIWPKSIAPFQVEIVPIG-KEAELME 483 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 EK L G DV DD E+ G +F ADL G P+++ +G K +++ +VE K R Sbjct: 484 LAEKFEKELEAAGIDVLVDDRDERPGVKFKDADLWGSPVRIAIGKKGLANGEVEWKFRNE 543 Query: 424 GIREDMSLEEVINYASHRFSN 444 + +E+VI A F+ Sbjct: 544 KQFTMVKVEDVIAKAKEYFAE 564 >gi|145348874|ref|XP_001418868.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579098|gb|ABO97161.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 674 Score = 199 bits (505), Expect = 9e-49, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 150/442 (33%), Gaps = 43/442 (9%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ +Y I + RD L H S G + G + +N+ IRE+ Sbjct: 273 MK--EYTTRIEEAKKRDHRTIG--LNQELFFFHHLSPGSCFFQKHGARIYNNLVQFIREK 328 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 E+ P + + DLW SG Y + M + P + +F Sbjct: 329 YWEYEYDEVITPNIYNFDLWKTSGHAAHYKENMFSFNVEKE-EFGLKPMNCPGHCVMFAH 387 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 ++YR LP + R+E G+ R R F DA+ F + + F+ Sbjct: 388 RHRTYRELPMRVADFGVLHRNEFSGALHGLTRVRRFQQDDAHIFCREDQMEQE--LSGFL 445 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 +L + + + M+ + P G E D + + Sbjct: 446 QFLDDVYEVFGLTYEMKLSTRPEGYLGELE-----------------VWDKAEAALKSAL 488 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 D + E A Y D+ +FD+L + + ++ F ++ Sbjct: 489 DRSGREWKLNEGDGAFYGPKIDI---TVFDALKRRFQCATVQLD----FQLPIRFD---- 537 Query: 300 ATFKGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 ++ + + + +G++ + A++ + WP ++P ++ ++ I Sbjct: 538 LSYVDENNSSVRPIIIHRAILGSVERMFAILT---EHFAGKWPYWLSPKQVMIVPI---S 591 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + RD C ++ +L K G D ++ + A L F ++ G ++ V + Sbjct: 592 EASRDYCYEVKRQLRKAGHFAEVDVTDRKMQKKVREAQLDQFNYILVCGESEKANETVNV 651 Query: 419 KHRLTGIREDMSLEEVINYASH 440 + R + + E I Sbjct: 652 RTRDNKVHVIIRGETAITRFRK 673 >gi|255071725|ref|XP_002499537.1| predicted protein [Micromonas sp. RCC299] gi|226514799|gb|ACO60795.1| predicted protein [Micromonas sp. RCC299] Length = 722 Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats. Identities = 78/422 (18%), Positives = 149/422 (35%), Gaps = 39/422 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y L I + RD + L H S G +LP G K + + IRE+ Sbjct: 279 MAEYKLRIEEAKKRDHRLIG--LNQELFFFHTLSPGSCFFLPQGAKIYNKLMEFIREKYW 336 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + + DLW SG Y + M D P + +F + Sbjct: 337 EYEYDEVITPNVYNFDLWKTSGHAAHYKENMFSF-DVEKAEFGLKPMNCPGHCVMFGNRK 395 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +S+R LP + R+E G+ R R F DA+ F + K FV Sbjct: 396 RSFRELPMRLADFGVLHRNEFSGALHGLTRVRRFQQDDAHIFCRQDQMEKE--LAAFVKM 453 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L + + + M+ + P G E + + + Sbjct: 454 LDEIYEVFGLTYEMKLSTRPEGYLGELE-----------------TWNKAEAALEAALNG 496 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + A Y D+ +FD+L + + ++ F +++L Sbjct: 497 TGKEWKLNPGDGAFYGPKIDI---TVFDALKRRFQCATVQLD----FQLPIRFNLSY--- 546 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 A+ + + + +G++ + A++ + WP ++P ++ ++ I + Sbjct: 547 VSEANEPERPIIIHRAILGSVERMFAILT---EHFAGKWPFWLSPRQVMIVPI---SEQS 600 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 RD ++ + L K G DD ++ + A L + ++VG ++ V I+ R Sbjct: 601 RDYAHEVRSVLRKEGFYCEVDDSDRKMQKKVREAQLEQWNYILVVGEGEKTNRTVNIRTR 660 Query: 422 LT 423 Sbjct: 661 DN 662 >gi|170095495|ref|XP_001878968.1| predicted protein [Laccaria bicolor S238N-H82] gi|164646272|gb|EDR10518.1| predicted protein [Laccaria bicolor S238N-H82] Length = 721 Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats. Identities = 68/440 (15%), Positives = 145/440 (32%), Gaps = 44/440 (10%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD L + S G +LP G + +++ ++R E + G E+ Sbjct: 313 EAAKRDHRKIGKDQELF--FFNDLSPGSCFFLPHGTRIYNSLVELMRSEYFKRGYQEVIS 370 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + ++ LW SG + +Y +M L D + P + IF S +SY+ LP Sbjct: 371 PNMYNSKLWETSGHWQNYKDDMF-LLDVEKEKWALKPMNCPGHCLIFDSRDRSYKELPIR 429 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + + R+E G+ R R F+ D + F + P + + +F I+ G Sbjct: 430 MAEFGIIHRNEASGALTGLTRVRRFVQDDTHVFCM-PSQLEEEISMLFDFMQHIYGLFGF 488 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + + P + E A+ + Sbjct: 489 DF-RLELSTRPDNYLGTIETWDQAEAQLKLALEKHY----------------PGKWDLNP 531 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D+ + D+L + + + ++ F +++L + + Sbjct: 532 GDGAFYGPKIDI---TIRDALRRSFQCATIQLD----FQLPERFNLKYR---SAEEAHNR 581 Query: 311 YVQMGSYGIGAMRVVAAVIESSHD-GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + +G++ A+I K + +I Sbjct: 582 PVIIHRAILGSLERFIAIITEHFAGKWPFWISPRQVLVIPVAAPYK-------EYAAEIT 634 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL---TGIR 426 RL+ +G D+ + + ++ + ++VG + + V +++R T + Sbjct: 635 ERLTSLGLFADVDNGENTLPKKIRNGEIAQYNFILVVGQEELDARSVNVRNRDDVGTKAK 694 Query: 427 EDM-SLEEVINYASHRFSNN 445 +M L ++ + Sbjct: 695 GEMVPLNLIVEKLVALKKSR 714 >gi|191638564|ref|YP_001987730.1| prolyl-tRNA synthetase [Lactobacillus casei BL23] gi|190712866|emb|CAQ66872.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) [Lactobacillus casei BL23] Length = 579 Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats. Identities = 111/281 (39%), Positives = 161/281 (57%), Gaps = 7/281 (2%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ F+P +E P AE SHK+MLR+G + Q G+Y++LPL ++ L + AII +E Sbjct: 5 MKQSRMFIPTEKEVPSSAEAKSHKMMLRSGFVRQIQAGVYAYLPLAERVLARIEAIIDDE 64 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A++M +P L A+LW ESGRY++YG + +L +R D+ MI GPTHEE TD+ R+ Sbjct: 65 MTKIDAVKMKMPVLLPAELWEESGRYETYGPNLFKLKNRQDRKMILGPTHEETFTDLVRN 124 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ +P YQIQ KFRDE RPR+GV+R REF+M+DAYSF + Y +M + Sbjct: 125 ELKSYKRMPLVLYQIQDKFRDEDRPRYGVLRGREFIMQDAYSFTSNDQDLDTIYRQMEHA 184 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL+ + + G +GG S EF +AD GE + S D+ E Sbjct: 185 YTNIFDRLGLRYRSIIGDGGAMGGKDSKEFSAIADIGEDTIVYSDS-SDYAANLE--MAT 241 Query: 241 DIISLNSIVEQWTAPYAAT----SDVHNEKLFDSLPENKRV 277 + VE+ A + F +PE K + Sbjct: 242 SMALPKQGVEEQAALEPVDTKDAKTIAEVAEFLKVPEKKLI 282 Score = 153 bits (386), Expect = 7e-35, Method: Composition-based stats. Identities = 67/182 (36%), Positives = 100/182 (54%), Gaps = 3/182 (1%) Query: 260 SDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ + P+ + V RGIE+GHIF GT+Y+ M A F +G+ + MGSY Sbjct: 386 ADIRFVTEGEVSPDGQGVLKFTRGIEIGHIFKLGTRYTETMGANFLDENGRSQPIIMGSY 445 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A+ E D G++WP ++APF I LI + + + I L G Sbjct: 446 GIGVSRLLSAIAEQQADEHGLVWPTTIAPFDIHLIPVNLKREEQKSLTASIETMLEVAGY 505 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 V DD E+ G +FA +DL+G PL+V VG K V + VE+K R TG ++ EE+I+ Sbjct: 506 SVLVDDRNERPGVKFADSDLIGVPLRVTVGKKAVDE-IVELKLRKTGETIEVKKEELISS 564 Query: 438 AS 439 Sbjct: 565 IK 566 >gi|241678425|ref|XP_002412596.1| threonyl-tRNA synthetase, putative [Ixodes scapularis] gi|215506398|gb|EEC15892.1| threonyl-tRNA synthetase, putative [Ixodes scapularis] Length = 692 Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats. Identities = 73/443 (16%), Positives = 147/443 (33%), Gaps = 49/443 (11%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L H+ S G + P G + + +I+ E N+ G E+ Sbjct: 287 EEAAKRDHRKIGREQELF--FFHELSPGSCFFQPNGAYIYNTLVDMIKAEYNKRGFQEVV 344 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + ++ LW+ SG + Y M D + P + +F +S+R LP Sbjct: 345 TPNMYNSKLWLTSGHWQHYQDNMFSF-DVEKETFALKPMNCPGHCLMFDVRPRSWRELPL 403 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+EL G+ R R F DA+ F + + + I+ G Sbjct: 404 RMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCASEQIASEM-KGALEFLKHIYSIFG 462 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 ++ + P G E A+ +D ++ Sbjct: 463 FTF-KLKLSTRPEGFLGDIEVWNDAEK-----------------QLEQSLNDFGYPWTLN 504 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 A Y D+ + D+L + + ++ F ++ + ++ G+ Sbjct: 505 PGDGAFYGPKIDI---TIMDALRRQHQCATIQLD----FQLPIRF----NLSYISETGEK 553 Query: 310 HYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + +G++ + A++ ++ GK W + + + D ++ Sbjct: 554 KRPVIIHRAILGSVERMIAILTENYGGKWPFWLSPRQVTMVPVGPMYD------DYALEV 607 Query: 369 YARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVG---SKFVSDSKVEIKHRLTG 424 +L G D D G + + A L + + G +K V ++ R Sbjct: 608 KRQLCAAGFRCDADLDPGNTMNKKIRNAQLDQYNFIL--GGLPAKT--SGTVNVRTRDNK 663 Query: 425 IREDMSLEEVINYASHRFSNNRP 447 + + S+ +VI S P Sbjct: 664 VHGEFSVADVIERFSRLKREFVP 686 >gi|33239959|ref|NP_874901.1| prolyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|81835850|sp|Q7VD75|SYP_PROMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|33237485|gb|AAP99553.1| Prolyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 603 Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats. Identities = 104/240 (43%), Positives = 149/240 (62%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ L L++ P +AEI SH+L++R G I + + GIY+++PL K + + +I++EE Sbjct: 1 MRVSRLMLVTLRDVPAEAEIVSHQLLIRGGFIKRVTSGIYAYMPLMWKVIKKITSIVQEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKE---MLRLADRNDKAMIYGPTHEEVMTDI 117 + G +E +P L A+LW ESGR+D Y M L+DR + + GPTHEEV+T I Sbjct: 61 LDSKGCLETLLPQLHPAELWKESGRWDGYTAGEGIMFHLSDRQGRELGLGPTHEEVITKI 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 ++SY+ LP YQIQ KFRDE+RPRFG+MRSREF+MKDAYSF K +Y +M Sbjct: 121 ANEFLQSYKQLPVNLYQIQTKFRDEIRPRFGLMRSREFIMKDAYSFHADETNLKETYLEM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +Y +IF R GL+++ + A+SG IGG S EF+V A+ GE + + E Sbjct: 181 NDAYEKIFKRCGLETVAVDADSGAIGGAESREFMVTAEAGEDLIL-LSPDKKYAANQEKA 239 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 69/178 (38%), Positives = 100/178 (56%), Gaps = 1/178 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 P+ K ++ RGIEVGHIF G KYS + A+F G + MG YGIG R+ A +E Sbjct: 422 PKQKLIAKRGIEVGHIFQLGRKYSSCLQASFTNEMGLEEPFWMGCYGIGISRLAQASVEQ 481 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 ++D GIIWP +APF++ +I D + R+ EK+Y++L G DV DD E+ G + Sbjct: 482 NYDQSGIIWPLGIAPFEVIVIVANMKDDLQRELGEKLYSQLKDEGVDVLIDDRKERAGVK 541 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 F ADL+G P ++I G + + VE+ R TGI + + EE I SN + + Sbjct: 542 FKDADLIGIPWKIISG-RDSATGIVELVERSTGISKSLKAEEAIKELLEEISNYKKSI 598 >gi|313891198|ref|ZP_07824817.1| proline--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026] gi|313120561|gb|EFR43681.1| proline--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026] Length = 617 Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats. Identities = 101/242 (41%), Positives = 148/242 (61%), Gaps = 2/242 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S GIY++LPL + ++ + I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGIYAYLPLANRTIEKLKGIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L +ADLW ESGRY++YG+++ +L +R I GPTHEE T + R Sbjct: 61 FDKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRESSDFILGPTHEETFTTLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQAKYRDEKRPRNGLLRTREFIMKDGYSFHQNDEDLDITYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL+ + + G +GG S EF+ + + +D IPS + + Sbjct: 181 YEAIFTRSGLEFKGIIGDGGAMGGKDSQEFMAITP--DRTDLNRWLILDKSIPSLESIPE 238 Query: 241 DI 242 D+ Sbjct: 239 DV 240 Score = 143 bits (361), Expect = 5e-32, Method: Composition-based stats. Identities = 69/238 (28%), Positives = 115/238 (48%), Gaps = 18/238 (7%) Query: 216 TGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 + ++ ++ D + D L E+ +A D+ K + P+ Sbjct: 377 PSDIRIVADRNVQDLANAVTGANKDGYHLLGVNPERD--FHAEYVDIREVKEGEISPDGH 434 Query: 276 RVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSH 333 V RGIE+GHIF GT+YS + AT +G+ + MG YGIG R+++AVIE Sbjct: 435 GVLRFARGIEIGHIFKLGTRYSNSLGATILDENGRAVPIVMGCYGIGVSRILSAVIEQHA 494 Query: 334 D-------------GKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVF 380 GI +P+ +APF + LI + DQ +D K+ L+ G +V Sbjct: 495 RLFVNKTPKGDYRFAWGINFPEELAPFDVHLITVNTKDQEAQDLTSKVEKDLTAKGYEVL 554 Query: 381 WDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 DD E++GS+F+ +DL+G P+++ VG K ++ VEIK + +G ++ + +I Sbjct: 555 TDDRNERVGSKFSDSDLIGLPIRITVGKK-AAEGIVEIKIKASGDSIEVHADNIIETL 611 >gi|283455556|ref|YP_003360120.1| proS Prolyl-tRNA synthetase [Bifidobacterium dentium Bd1] gi|283102190|gb|ADB09296.1| proS Prolyl-tRNA synthetase [Bifidobacterium dentium Bd1] Length = 605 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 103/283 (36%), Positives = 152/283 (53%), Gaps = 2/283 (0%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S FL L+E+P DA++ S KL+ R + + + GI++WLPLG L+ + IIREE Sbjct: 1 MSTMFLRTLREDPADADVVSDKLLQRACYLRKAAPGIWTWLPLGLTVLNKIENIIREEMA 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 A E+ L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 61 SIDAQEVHFSGLLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDLY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF L EG +Y +Y Sbjct: 121 SSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTLDKEGLVKAYMDERGAYE 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RIF RL LK +P+ A +GP+GG S EF+ + GE S + + + T + Sbjct: 181 RIFDRLDLKYVPVHAMAGPMGGFESEEFLAPMEIGEDTFAQSPSGKAWNVEALTTPEPEA 240 Query: 243 ISLNSI--VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 I E+ P AAT D E + P + + + + Sbjct: 241 IDCTDTPAAEKRPTPDAATIDKMVEFANANHPRSDGRAWQASD 283 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 4/189 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ RG+E+G +F G KYS + +GK V MG Sbjct: 414 GTVEAVEVRHGDMSPDGSGPLSFERGVEIGQVFQLGLKYSNALGLKVLDQNGKTVPVWMG 473 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG RV+A + E+ HD KG+ W +V + D +A E++ A L Sbjct: 474 SYGIGVSRVMACIAETHHDDKGLAW-PAVIAPAQVHVVATGKDAAAFEAAEQLIAELEAK 532 Query: 376 GCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD + G +F A+L+G PL + G V++ +E++ R E + + + Sbjct: 533 GIEVIFDDRKKVSPGVKFKDAELIGVPLIAVAGRDTVNNGTIEVRDRNGENAEAVPVADA 592 Query: 435 INYASHRFS 443 + R + Sbjct: 593 AQVIADRVA 601 >gi|225166271|ref|ZP_03727968.1| Proline--tRNA ligase [Opitutaceae bacterium TAV2] gi|224799484|gb|EEG18016.1| Proline--tRNA ligase [Opitutaceae bacterium TAV2] Length = 302 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 109/286 (38%), Positives = 168/286 (58%), Gaps = 11/286 (3%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S+YF+P L+E+P DAEIASHKL++R G++ + S G+Y+++PLG +AL ++ I REE Sbjct: 3 RWSQYFIPTLKESPADAEIASHKLLVRAGLVRKLSGGLYTFMPLGLRALHKISQICREEI 62 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR-------LADRNDKAMIYGPTHEEVM 114 + G IE+ +P L A+LW + R+ + + M R D + GPTHEE++ Sbjct: 63 DAGGGIELWMPHLHPAELWEQGPRWAAAREIMFRADSAGDGKRAPRDPEFVLGPTHEEII 122 Query: 115 TDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSY 174 T + +S I SYR+LP FYQI KFR+E+RPR+G+MR+REF+M DAYSFD+ + + +Y Sbjct: 123 TPLVKSEISSYRDLPKNFYQIATKFRNEIRPRYGLMRAREFVMMDAYSFDVDDDSAVKAY 182 Query: 175 NKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFM----DF 230 M +Y + F RLG+++I + A++G +GG SHEF+V A+ G+ V S + Sbjct: 183 FAMKTAYEKFFARLGVQAIAVEADTGVMGGSYSHEFMVPAEVGDDDVIYSDAGYAANREK 242 Query: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKR 276 + + A T+ H E S+P +K+ Sbjct: 243 ATSALVPAEFAPPPPEAPAPVEFATPGVTTIAHLEDEPYSVPGDKQ 288 >gi|167422088|ref|ZP_02313841.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|166958900|gb|EDR55921.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. MG05-1020] Length = 369 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 64/398 (16%), Positives = 126/398 (31%), Gaps = 38/398 (9%) Query: 50 LDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPT 109 + +R + E+ P + LW ++G +++Y + M ++ P Sbjct: 1 FRELETFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYAEHMFT-TSSENREYCIKPM 59 Query: 110 HEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPE 168 + IF +KSYR+LP + R+E G+MR R F DA+ F + Sbjct: 60 NCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFTQDDAHVFCTEEQ 119 Query: 169 GSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFM 228 N ++ G + I ++ + P S E A+ Sbjct: 120 VRDE-VNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSDELWTRAED------------ 166 Query: 229 DFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIF 288 + A Y + L D L + ++ F Sbjct: 167 -----DLAAALTENGIPFDYQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLD----F 214 Query: 289 YFGTKYSLPMSATFKGADGKDH-YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 + S A++ G + V + +G+M ++ + G W V Sbjct: 215 SLPGRLS----ASYIGENNDRQVPVMIHRAILGSMERFIGILTEEYAGFFPTWLAPVQVV 270 Query: 348 KISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVG 407 +++ D +++ +L G D E+IG + L P ++ G Sbjct: 271 VMNIT------DSQSDYVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCG 324 Query: 408 SKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 K V K+ ++ R + + V++ + Sbjct: 325 DKEVESGKIAVRTRRGKDLGSLDVNVVVDQLLAEIRSR 362 >gi|254365284|ref|ZP_04981329.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis str. Haarlem] gi|134150797|gb|EBA42842.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis str. Haarlem] Length = 692 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 64/438 (14%), Positives = 131/438 (29%), Gaps = 49/438 (11%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 I + RD +L L + + G+ + P G + R + G + Sbjct: 262 IEEAQRRDHRKLGVELDLFS-FPDEIGSGLAVFHPKGGIVRRELEDYSRRKHTEAGYQFV 320 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDI 117 + P + A L+ SG D Y M + + P + + I Sbjct: 321 NSPHITKAQLFHTSGHLDWYADGMFPPMHIDAEYNADGSLRKPGQDYYLKPMNCPMHCLI 380 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 FR+ +SYR LP ++ +R E G+ R R M DA+ F + Sbjct: 381 FRARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDAHIFCTRDQMRDEL-RS 439 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + L + GL + + + +++ + Sbjct: 440 LLRFVLDLLADYGLTDFYLELST----------------KDPEKFVGAEEVWEEATTVLA 483 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + A Y + ++ D+L ++S ++ F F ++ Sbjct: 484 EVGAESGLELVPDPGGAAFYGPKI---SVQVKDALGRTWQMSTIQLD----FNFPERF-- 534 Query: 297 PMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 + ADG H + G++ ++ + G W V I + Sbjct: 535 --GLEYTAADGTRHRPVMIHRALFGSIERFFGILTEHYAGAFPAWLAPVQVVGIPVA--- 589 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 E++ +L G D +++ + P V+ G + V+ Sbjct: 590 ---DEHVAYLEEVATQLKSHGVRAEVDASDDRMAKKIVHHTNHKVPFMVLAGDRDVAAGA 646 Query: 416 VEIKHRLTGIREDMSLEE 433 V + ++ ++ Sbjct: 647 VSFRFGDRTQINGVARDD 664 >gi|254232730|ref|ZP_04926057.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis C] gi|124601789|gb|EAY60799.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis C] Length = 692 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 64/438 (14%), Positives = 131/438 (29%), Gaps = 49/438 (11%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 I + RD +L L + + G+ + P G + R + G + Sbjct: 262 IEEAQRRDHRKLGVELDLFS-FPDEIGSGLAVFHPKGGIVRRELEDYSRRKHTEAGYQFV 320 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDI 117 + P + A L+ SG D Y M + + P + + I Sbjct: 321 NSPHITKAQLFHTSGHLDWYADGMFPPMHIDAECNADGSLRKPGQDYYLKPMNCPMHCLI 380 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 FR+ +SYR LP ++ +R E G+ R R M DA+ F + Sbjct: 381 FRARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDAHIFCTRDQMRDEL-RS 439 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + L + GL + + + +++ + Sbjct: 440 LLRFVLDLLADYGLTDFYLELST----------------KDPEKFVGAEEVWEEATTVLA 483 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + A Y + ++ D+L ++S ++ F F ++ Sbjct: 484 EVGAESGLELVPDPGGAAFYGPKI---SVQVKDALGRTWQMSTIQLD----FNFPERF-- 534 Query: 297 PMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 + ADG H + G++ ++ + G W V I + Sbjct: 535 --GLEYTAADGTRHRPVMIHRALFGSIERFFGILTEHYAGAFPAWLAPVQVVGIPVA--- 589 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 E++ +L G D +++ + P V+ G + V+ Sbjct: 590 ---DEHVAYLEEVATQLKSHGVRAEVDASDDRMAKKIVHHTNHKVPFMVLAGDRDVAAGA 646 Query: 416 VEIKHRLTGIREDMSLEE 433 V + ++ ++ Sbjct: 647 VSFRFGDRTQINGVARDD 664 >gi|308379255|ref|ZP_07485665.2| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu010] gi|308357619|gb|EFP46470.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu010] Length = 697 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 64/438 (14%), Positives = 131/438 (29%), Gaps = 49/438 (11%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 I + RD +L L + + G+ + P G + R + G + Sbjct: 267 IEEAQRRDHRKLGVELDLFS-FPDEIGSGLAVFHPKGGIVRRELEDYSRRKHTEAGYQFV 325 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDI 117 + P + A L+ SG D Y M + + P + + I Sbjct: 326 NSPHITKAQLFHTSGHLDWYADGMFPPMHIDAEYNADGSLRKPGQDYYLKPMNCPMHCLI 385 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 FR+ +SYR LP ++ +R E G+ R R M DA+ F + Sbjct: 386 FRARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDAHIFCTRDQMRDEL-RS 444 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + L + GL + + + +++ + Sbjct: 445 LLRFVLDLLADYGLTDFYLELST----------------KDPEKFVGAEEVWEEATTVLA 488 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + A Y + ++ D+L ++S ++ F F ++ Sbjct: 489 EVGAESGLELVPDPGGAAFYGPKI---SVQVKDALGRTWQMSTIQLD----FNFPERF-- 539 Query: 297 PMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 + ADG H + G++ ++ + G W V I + Sbjct: 540 --GLEYTAADGTRHRPVMIHRALFGSIERFFGILTEHYAGAFPAWLAPVQVVGIPVA--- 594 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 E++ +L G D +++ + P V+ G + V+ Sbjct: 595 ---DEHVAYLEEVATQLKSHGVRAEVDASDDRMAKKIVHHTNHKVPFMVLAGDRDVAAGA 651 Query: 416 VEIKHRLTGIREDMSLEE 433 V + ++ ++ Sbjct: 652 VSFRFGDRTQINGVARDD 669 >gi|15609751|ref|NP_217130.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv] gi|15842154|ref|NP_337191.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551] gi|31793799|ref|NP_856292.1| threonyl-tRNA synthetase [Mycobacterium bovis AF2122/97] gi|121638501|ref|YP_978725.1| threonyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662454|ref|YP_001283977.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] gi|148823808|ref|YP_001288562.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis F11] gi|167968044|ref|ZP_02550321.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] gi|215404564|ref|ZP_03416745.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987] gi|215412399|ref|ZP_03421153.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A] gi|215428017|ref|ZP_03425936.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T92] gi|215431569|ref|ZP_03429488.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis EAS054] gi|218754354|ref|ZP_03533150.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503] gi|219558618|ref|ZP_03537694.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T17] gi|224990995|ref|YP_002645682.1| threonyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|253798303|ref|YP_003031304.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis KZN 1435] gi|254551665|ref|ZP_05142112.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260187628|ref|ZP_05765102.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A] gi|260201742|ref|ZP_05769233.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|260205937|ref|ZP_05773428.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis K85] gi|289444154|ref|ZP_06433898.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|289448265|ref|ZP_06438009.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis CPHL_A] gi|289553596|ref|ZP_06442806.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis KZN 605] gi|289570786|ref|ZP_06451013.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis T17] gi|289575325|ref|ZP_06455552.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis K85] gi|289746408|ref|ZP_06505786.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis 02_1987] gi|289751239|ref|ZP_06510617.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis T92] gi|289754734|ref|ZP_06514112.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis EAS054] gi|289762788|ref|ZP_06522166.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis GM 1503] gi|294994277|ref|ZP_06799968.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis 210] gi|297635225|ref|ZP_06953005.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207] gi|297732218|ref|ZP_06961336.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506] gi|298526090|ref|ZP_07013499.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis 94_M4241A] gi|306776889|ref|ZP_07415226.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu001] gi|306780653|ref|ZP_07418990.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu002] gi|306785417|ref|ZP_07423739.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu003] gi|306790017|ref|ZP_07428339.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu004] gi|306794098|ref|ZP_07432400.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu005] gi|306798512|ref|ZP_07436814.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu006] gi|306804375|ref|ZP_07441043.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu008] gi|306807585|ref|ZP_07444253.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu007] gi|306969787|ref|ZP_07482448.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu009] gi|307080714|ref|ZP_07489884.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu011] gi|307085303|ref|ZP_07494416.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu012] gi|313659553|ref|ZP_07816433.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475] gi|54039692|sp|P67583|SYT_MYCBO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|54042049|sp|P67582|SYT_MYCTU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166225463|sp|A1KLW4|SYT_MYCBP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166225467|sp|A5U5W5|SYT_MYCTA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783528|sp|C1AF85|SYT_MYCBT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|2104299|emb|CAB08628.1| PROBABLE THREONYL-TRNA SYNTHETASE THRS (THREONINE-TRNA SYNTHETASE)(ThrRS) (THREONINE-TRNA LIGASE) [Mycobacterium tuberculosis H37Rv] gi|13882439|gb|AAK47005.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551] gi|31619393|emb|CAD94831.1| PROBABLE THREONYL-TRNA SYNTHETASE THRS (THREONINE-TRNA SYNTHETASE)(ThrRS) (THREONINE-TRNA LIGASE) [Mycobacterium bovis AF2122/97] gi|121494149|emb|CAL72627.1| Probable threonyl-tRNA synthetase thrS [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148506606|gb|ABQ74415.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] gi|148722335|gb|ABR06960.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis F11] gi|224774108|dbj|BAH26914.1| threonyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|253319806|gb|ACT24409.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis KZN 1435] gi|289417073|gb|EFD14313.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|289421223|gb|EFD18424.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis CPHL_A] gi|289438228|gb|EFD20721.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis KZN 605] gi|289539756|gb|EFD44334.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis K85] gi|289544540|gb|EFD48188.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis T17] gi|289686936|gb|EFD54424.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis 02_1987] gi|289691826|gb|EFD59255.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis T92] gi|289695321|gb|EFD62750.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis EAS054] gi|289710294|gb|EFD74310.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis GM 1503] gi|298495884|gb|EFI31178.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis 94_M4241A] gi|308214743|gb|EFO74142.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu001] gi|308326483|gb|EFP15334.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu002] gi|308329935|gb|EFP18786.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu003] gi|308333550|gb|EFP22401.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu004] gi|308337578|gb|EFP26429.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu005] gi|308341244|gb|EFP30095.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu006] gi|308345982|gb|EFP34833.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu007] gi|308349051|gb|EFP37902.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu008] gi|308352705|gb|EFP41556.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu009] gi|308361561|gb|EFP50412.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu011] gi|308365172|gb|EFP54023.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu012] gi|323718811|gb|EGB27968.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis CDC1551A] gi|326904227|gb|EGE51160.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis W-148] gi|328458073|gb|AEB03496.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis KZN 4207] Length = 692 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 64/438 (14%), Positives = 131/438 (29%), Gaps = 49/438 (11%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 I + RD +L L + + G+ + P G + R + G + Sbjct: 262 IEEAQRRDHRKLGVELDLFS-FPDEIGSGLAVFHPKGGIVRRELEDYSRRKHTEAGYQFV 320 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDI 117 + P + A L+ SG D Y M + + P + + I Sbjct: 321 NSPHITKAQLFHTSGHLDWYADGMFPPMHIDAEYNADGSLRKPGQDYYLKPMNCPMHCLI 380 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 FR+ +SYR LP ++ +R E G+ R R M DA+ F + Sbjct: 381 FRARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDAHIFCTRDQMRDEL-RS 439 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + L + GL + + + +++ + Sbjct: 440 LLRFVLDLLADYGLTDFYLELST----------------KDPEKFVGAEEVWEEATTVLA 483 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + A Y + ++ D+L ++S ++ F F ++ Sbjct: 484 EVGAESGLELVPDPGGAAFYGPKI---SVQVKDALGRTWQMSTIQLD----FNFPERF-- 534 Query: 297 PMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 + ADG H + G++ ++ + G W V I + Sbjct: 535 --GLEYTAADGTRHRPVMIHRALFGSIERFFGILTEHYAGAFPAWLAPVQVVGIPVA--- 589 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 E++ +L G D +++ + P V+ G + V+ Sbjct: 590 ---DEHVAYLEEVATQLKSHGVRAEVDASDDRMAKKIVHHTNHKVPFMVLAGDRDVAAGA 646 Query: 416 VEIKHRLTGIREDMSLEE 433 V + ++ ++ Sbjct: 647 VSFRFGDRTQINGVARDD 664 >gi|257456072|ref|ZP_05621275.1| prolyl-tRNA synthetase [Treponema vincentii ATCC 35580] gi|257446530|gb|EEV21570.1| prolyl-tRNA synthetase [Treponema vincentii ATCC 35580] Length = 578 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 89/241 (36%), Positives = 139/241 (57%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+RS+ F+P L+E P +A + SH+L+LR GMI + G++++LPLG + V I+REE Sbjct: 1 MKRSQTFIPTLRETPAEAVVVSHQLLLRAGMIRRLGNGLFNYLPLGLRVFRKVENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G +E + ++W ES R+ + G +LR+ +R + ++ PT+EE T + R Sbjct: 61 IDAIGCLECKASVVAPGEIWQESKRWYTMGDGLLRMKNRLGQDLVVSPTNEESFTALMRY 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY++ P + Y I K+RDE+RPR+G+MR+REF MKDAYSF E +Y + Sbjct: 121 ELGSYKDYPLSVYHINTKYRDEIRPRYGLMRAREFTMKDAYSFHTNAECLDKTYRAFGEA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R GL I +RA+SG +GG S EF+V + G+ + + Sbjct: 181 YEKIFRRFGLSIIRVRADSGSMGGSGSEEFMVESAIGDDTLILCPQCRYSANEEKAACAP 240 Query: 241 D 241 D Sbjct: 241 D 241 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 67/189 (35%), Positives = 102/189 (53%), Gaps = 5/189 (2%) Query: 257 AATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A DV K DS P S +G E+GHIF GTKY+ M+ T+ G+ Y M Sbjct: 385 AMVYDVRVVKAGDSCPLCGTPFYSKKGNELGHIFKLGTKYTKSMNMTYLDESGQQQYPLM 444 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G YGIG R +A++IE HD GIIWP SVAP+ + ++ I ++ + A ++++ L+ Sbjct: 445 GCYGIGIDRALASIIEEHHDSNGIIWPMSVAPYHVGIVPI-QYEGTMKAAADRLHDELTM 503 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V DD E+ G +F DL+G P+++++ K + + VE K R +M L+ V Sbjct: 504 RGIEVLLDDRVERPGVKFKDMDLIGLPIRIVISDKKLPN--VEFKFRSDTDPVNMPLDGV 561 Query: 435 INYASHRFS 443 +Y R Sbjct: 562 ADYVVQRVQ 570 >gi|306823404|ref|ZP_07456779.1| proline--tRNA ligase [Bifidobacterium dentium ATCC 27679] gi|309802595|ref|ZP_07696699.1| proline--tRNA ligase [Bifidobacterium dentium JCVIHMP022] gi|304553111|gb|EFM41023.1| proline--tRNA ligase [Bifidobacterium dentium ATCC 27679] gi|308220659|gb|EFO76967.1| proline--tRNA ligase [Bifidobacterium dentium JCVIHMP022] Length = 611 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 103/284 (36%), Positives = 152/284 (53%), Gaps = 2/284 (0%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+E+P DA++ S KL+ R + + + GI++WLPLG L+ + IIREE Sbjct: 6 RMSTMFLRTLREDPADADVVSDKLLQRACYLRKAAPGIWTWLPLGLTVLNKIENIIREEM 65 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 A E+ L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 66 ASIDAQEVHFSGLLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDL 125 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF L EG +Y +Y Sbjct: 126 YSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTLDKEGLVKAYMDERGAY 185 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 RIF RL LK +P+ A +GP+GG S EF+ + GE S + + + T + Sbjct: 186 ERIFDRLDLKYVPVHAMAGPMGGFESEEFLAPMEIGEDTFAQSPSGKAWNVEALTTPEPE 245 Query: 242 IISLNSI--VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 I E+ P AAT D E + + + + + Sbjct: 246 AIDCTDTPAAEKRPTPDAATIDKMVEFANANHSRSDGRAWQASD 289 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 4/189 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ RG+E+G +F G KYS + +GK V MG Sbjct: 420 GTVEAVEVRHGDMSPDGSGPLSFERGVEIGQVFQLGLKYSNALGLKVLDQNGKTVPVWMG 479 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG RV+A + E+ HD KG+ W +V + D +A E++ A L Sbjct: 480 SYGIGVSRVMACIAETHHDDKGLAW-PAVIAPAQVHVVATGKDAAAFEAAEQLIAELEAK 538 Query: 376 GCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD + G +F A+L+G PL + G V++ +E++ R E + + + Sbjct: 539 GIEVIFDDRKKVSPGVKFKDAELIGVPLIAVAGRDTVNNGTIEVRDRNGENAEAVPVADA 598 Query: 435 INYASHRFS 443 + R + Sbjct: 599 AQVIADRVA 607 >gi|68070445|ref|XP_677134.1| threonine--tRNA ligase [Plasmodium berghei strain ANKA] gi|56497130|emb|CAH95381.1| threonine--tRNA ligase, putative [Plasmodium berghei] Length = 780 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 79/483 (16%), Positives = 144/483 (29%), Gaps = 72/483 (14%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 + Y I + RD L L + S G W G K + + +R+E Sbjct: 313 LTDYIKFIEEAKKRDHRNVGKNLNLF-FFEKETSPGSGFWFAHGAKIYNKLIEFMRKEYR 371 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + S DLW SG Y +Y M + +K P + IF+ Sbjct: 372 IRKYEEVITPNIFSCDLWKTSGHYQNYKNCMFIF-NIENKEWGMKPMNCPGHCLIFKQLN 430 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP + R+E+ G+ R R F DA+ F + Sbjct: 431 ASYKSLPIRLADFGVLHRNEITGSLSGLTRVRRFQQDDAHIFCSLDHIKTE-VVNVLQFI 489 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +++ G K + + P + D +F S + Sbjct: 490 FFVYNLFGFKYD-LYLSTRP-----------------PKYIGDIDTWNFAEKSLKEALEL 531 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTKYSLPMS 299 + E A Y D+ L DSL + + ++ F K Sbjct: 532 ANVEWKLNEGDGAFYGPKIDI---VLKDSLNRSHQCGTVQLDFQLPIRFNLQYKNKEYGV 588 Query: 300 ATFKG--------------------------------------ADGKDHYVQMGSYGIGA 321 G D + + +G+ Sbjct: 589 GQETDSNLVNDSNIDPIEKKEDSTLENIDNNEDAINSQSTAILKKGFDRPIIIHRAILGS 648 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 + A++ GK W + + + + I+ L+ DV Sbjct: 649 VERFVAILVEHTSGKFPFWLSPRQAIVLPI------SDKFNEYAKYIHNVLTNNLFDVDV 702 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT-GIREDMSLEEVINYASH 440 D + + A L + ++VG K +S + V ++ R ++ +++E++N Sbjct: 703 DISVNTLNKKIREAQLKQYNFILVVGEKEISTNTVTVRDRDNPNDQKVYTIQELVNTFKK 762 Query: 441 RFS 443 Sbjct: 763 MLD 765 >gi|221231165|ref|YP_002510317.1| prolyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669] gi|225853864|ref|YP_002735376.1| prolyl-tRNA synthetase [Streptococcus pneumoniae JJA] gi|254782918|sp|B8ZKT3|SYP_STRPJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782920|sp|C1CC55|SYP_STRZJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|220673625|emb|CAR68112.1| prolyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669] gi|225723520|gb|ACO19373.1| prolyl-tRNA synthetase [Streptococcus pneumoniae JJA] gi|332076711|gb|EGI87173.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA17545] Length = 617 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 107/257 (41%), Positives = 148/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM PTL SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPTLLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L IV Sbjct: 241 QEEIKAELLKWIVSGED 257 Score = 142 bits (359), Expect = 8e-32, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + V+ + + Sbjct: 593 IKATGDTIEVHADNVLETL--EILSKK 617 >gi|148994606|ref|ZP_01823748.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68] gi|168489739|ref|ZP_02713938.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP195] gi|147927136|gb|EDK78174.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68] gi|183571778|gb|EDT92306.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP195] gi|332075929|gb|EGI86396.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA17570] Length = 617 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 106/257 (41%), Positives = 147/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L IV Sbjct: 241 QEEIKAELLKWIVSGED 257 Score = 142 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + V+ + + Sbjct: 593 IKATGDTIEVHADNVLETL--EILSKK 617 >gi|215446866|ref|ZP_03433618.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T85] gi|289758745|ref|ZP_06518123.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T85] gi|289714309|gb|EFD78321.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T85] Length = 692 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 65/438 (14%), Positives = 132/438 (30%), Gaps = 49/438 (11%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 I + RD +L L + + G+ + P G + R + G + Sbjct: 262 IEEAQRRDHRKLGVELDLFS-FPDEIGSGLAVFHPKGGIVRRELEDYSRRKHTEAGYQFV 320 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDI 117 + P + A L+ SG D Y M + + P + + I Sbjct: 321 NSPHITKAQLFHTSGHLDWYADGMFPPMHIDAEYNADGSLRKPGQDYYLKPMNCPMHCLI 380 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRP-RFGVMRSREFLMKDAYSFDLTPEGSKHSYNK 176 FR+ +SYR LP ++ +R E G+ R R M DA+ F + S Sbjct: 381 FRARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDAHIFCTRDQMSDEL-RS 439 Query: 177 MFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSEN 236 + L + GL + + + +++ + Sbjct: 440 LLRFVLDLLADYGLTDFYLELST----------------KDPEKFVGAEEVWEEATTVLA 483 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 + A Y + ++ D+L ++S ++ F F ++ Sbjct: 484 EVGAESGLELVPDPGGAAFYGPKI---SVQVKDALGRTWQMSTIQLD----FNFPERF-- 534 Query: 297 PMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK 355 + ADG H + G++ ++ + G W V I + Sbjct: 535 --GLEYTAADGTRHRPVMIHRALFGSIERFFGILTEHYAGAFPAWLAPVQVVGIPVA--- 589 Query: 356 AHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 E++ +L G D +++ + P V+ G + V+ Sbjct: 590 ---DEHVAYLEEVATQLKSHGVRAEVDASDDRMAKKIVHHTNHKVPFMVLAGDRDVAAGA 646 Query: 416 VEIKHRLTGIREDMSLEE 433 V + ++ ++ Sbjct: 647 VSFRFGDRTQINGVARDD 664 >gi|193216931|ref|YP_002000173.1| threonyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1] gi|193002254|gb|ACF07469.1| threonyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1] Length = 579 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 56/441 (12%), Positives = 138/441 (31%), Gaps = 31/441 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +++E RD L + +G WL G K + + + + + G Sbjct: 169 YLALVEERKERDHRKIGKDLNIFAV-SQLSGQGFPIWLEDGMKIHNAIRDYVLKLDRKFG 227 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L+ SG +D Y ++M +++ ++ P ++ +SY Sbjct: 228 FKEVLTPHFGEKKLYEISGHWDHYQEDMFTPIKMDNETLVARPMTCPHHIVLYNMTRRSY 287 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 R+LP + + +R E + + + + K + ++ + Sbjct: 288 RDLPIRYSEQSRLYRYEKSGALSGLERVRSMDLTEGHVFVRKDQIKAEFKHLYNMIQKAL 347 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 ++ + + F + ++ Sbjct: 348 SDFDIQVDHVSLSLRDPNNS-------------VKFFNDDKMWNQAEADLKEVLKELKIE 394 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 A Y D + + L + +S ++ F ++ + Sbjct: 395 YKEFIGEAAFYGPKIDFQVKTV---LNKIITMSTLQLD----FLLPARFEMKY---VDDK 444 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 + V + IG A++ G W + ++ D C Sbjct: 445 EEFQTPVLIHRGLIGTYERFIAILLEQTKGVLPYWLSPRQVTILPIV------DEVNDYC 498 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 +K+Y +G + D E+I + A LL +++G ++++ + ++ + Sbjct: 499 QKLYEEFIDLGINANVDLRSERINKKIREAQLLKTKFIIVIGKNEIANNTLAVRAYGSEE 558 Query: 426 REDMSLEEVINYASHRFSNNR 446 + + EE + + +N + Sbjct: 559 TKTYTKEEFLTMLENLKNNLK 579 >gi|223984654|ref|ZP_03634777.1| hypothetical protein HOLDEFILI_02073 [Holdemania filiformis DSM 12042] gi|223963395|gb|EEF67784.1| hypothetical protein HOLDEFILI_02073 [Holdemania filiformis DSM 12042] Length = 566 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 99/244 (40%), Positives = 145/244 (59%), Gaps = 1/244 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F L+EN +D + S L++R GMI + S G+Y +LPLG K L + I+REE Sbjct: 1 MRLSQSFFTTLRENVKDEDSVSGNLLVRAGMIKKSSAGVYMYLPLGYKVLKKIENIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ G+ E+ +P L +++V SGR D++G M L DR +K+ + GPTHEE+ Sbjct: 61 MDQAGSQELLMPALIPEEVYVASGRRDNFGSSMFSLKDRFNKSYVLGPTHEELFAVAAGM 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I+SY+++PF YQ Q K+RDE RPR+G++R REF+MKDAYSFD G +Y KMF + Sbjct: 121 KIRSYKDMPFNLYQFQTKYRDEARPRYGLIRVREFIMKDAYSFDKDEAGMDVAYQKMFDA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y R F R+ + +RA++G +GG LS EF + + GE + F E Sbjct: 181 YKRAFDRMHMDYKIVRADTGVMGGLLSEEFQAVTEIGEDVLVLCDQCS-FASNLEVAPCK 239 Query: 241 DIIS 244 D + Sbjct: 240 DEGA 243 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 105/208 (50%), Gaps = 3/208 (1%) Query: 237 TDFDDIISLNSIV--EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKY 294 T + V E + A Y A E + K V +GIE+G+ F GTKY Sbjct: 356 TGANKTGYHYIHVNQEDFKADYTADVRQIMEGDTCPICGGKIVFKKGIEIGNTFKLGTKY 415 Query: 295 SLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINI 354 + M + + K + V MGSYGIG R +AA+ E D G+ WP ++AP+ ++++ I Sbjct: 416 AQAMDLEYLDQENKLNPVWMGSYGIGIGRCMAALAEQHSDEHGLCWPINIAPYPVAIVVI 475 Query: 355 KAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDS 414 D+ A E++YA+L G DV DD E+ G +F DL+G P+++ VG K + D Sbjct: 476 AKKDEQQMAAAEQLYAQLQAAGVDVMLDDRDERPGVKFKDMDLIGTPIRLTVGKK-IGDG 534 Query: 415 KVEIKHRLTGIREDMSLEEVINYASHRF 442 VE+K R ED+S++ V+ Sbjct: 535 LVEMKLRKAEKAEDISIDNVVAKVLELI 562 >gi|194397930|ref|YP_002036964.1| prolyl-tRNA synthetase [Streptococcus pneumoniae G54] gi|307126481|ref|YP_003878512.1| prolyl-tRNA synthetase [Streptococcus pneumoniae 670-6B] gi|226701343|sp|B5E6T8|SYP_STRP4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|194357597|gb|ACF56045.1| prolyl-tRNA synthetase [Streptococcus pneumoniae G54] gi|306483543|gb|ADM90412.1| prolyl-tRNA synthetase [Streptococcus pneumoniae 670-6B] Length = 617 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 106/257 (41%), Positives = 147/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L IV Sbjct: 241 QEEIKAELLKWIVSGED 257 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 + D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTSEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + V+ + + Sbjct: 593 IKATGDTIEVHADNVLETL--EILSKK 617 >gi|149011134|ref|ZP_01832439.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75] gi|147764770|gb|EDK71700.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75] Length = 617 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 106/257 (41%), Positives = 147/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L IV Sbjct: 241 QEEIKAELLKWIVSGED 257 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-ATDGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + V+ + + Sbjct: 593 IKATGDTIEVHADNVLETL--EILSKK 617 >gi|148988004|ref|ZP_01819467.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73] gi|148996688|ref|ZP_01824406.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70] gi|149001621|ref|ZP_01826594.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69] gi|168484646|ref|ZP_02709598.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00] gi|168493960|ref|ZP_02718103.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06] gi|168576309|ref|ZP_02722192.1| prolyl-tRNA synthetase [Streptococcus pneumoniae MLV-016] gi|169833273|ref|YP_001693792.1| prolyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6] gi|225860301|ref|YP_002741810.1| prolyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14] gi|237649666|ref|ZP_04523918.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974] gi|237821366|ref|ZP_04597211.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2] gi|298229643|ref|ZP_06963324.1| prolyl-tRNA synthetase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298256044|ref|ZP_06979630.1| prolyl-tRNA synthetase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502082|ref|YP_003724022.1| proline--tRNA ligase [Streptococcus pneumoniae TCH8431/19A] gi|307066942|ref|YP_003875908.1| prolyl-tRNA synthetase [Streptococcus pneumoniae AP200] gi|226701344|sp|B1I8Z1|SYP_STRPI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782922|sp|C1CPD8|SYP_STRZT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|147757263|gb|EDK64302.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70] gi|147760079|gb|EDK67068.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69] gi|147926468|gb|EDK77541.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73] gi|168995775|gb|ACA36387.1| prolyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6] gi|172042164|gb|EDT50210.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00] gi|183576158|gb|EDT96686.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06] gi|183577873|gb|EDT98401.1| prolyl-tRNA synthetase [Streptococcus pneumoniae MLV-016] gi|225727194|gb|ACO23045.1| prolyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14] gi|298237677|gb|ADI68808.1| proline--tRNA ligase [Streptococcus pneumoniae TCH8431/19A] gi|301801205|emb|CBW33879.1| prolyl-tRNA synthetase [Streptococcus pneumoniae INV200] gi|306408479|gb|ADM83906.1| Prolyl-tRNA synthetase [Streptococcus pneumoniae AP200] gi|327390681|gb|EGE89021.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA04375] gi|332077566|gb|EGI88027.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA41301] gi|332202178|gb|EGJ16247.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA41317] gi|332203430|gb|EGJ17497.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA47368] gi|332204272|gb|EGJ18337.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA47901] Length = 617 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 106/257 (41%), Positives = 147/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L IV Sbjct: 241 QEEIKAELLKWIVSGED 257 Score = 142 bits (359), Expect = 8e-32, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + V+ + + Sbjct: 593 IKATGDTIEVHADNVLETL--EILSKK 617 >gi|149179156|ref|ZP_01857725.1| prolyl-tRNA synthetase [Planctomyces maris DSM 8797] gi|148842016|gb|EDL56410.1| prolyl-tRNA synthetase [Planctomyces maris DSM 8797] Length = 584 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 110/240 (45%), Positives = 149/240 (62%), Gaps = 4/240 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S +P ++E P DAEI SH+LMLR G+I Q G Y++LPLG KA+ I+REE Sbjct: 1 MRWSNTLIPTIKEVPADAEIPSHQLMLRAGLIRQLMAGAYTYLPLGWKAIQKAAQIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDK---AMIYGPTHEEVMTDI 117 + GA E+ +P LQ L+ + R +++G +++ M GPTHEEV+TD+ Sbjct: 61 MDAAGAAELHMPALQPIGLFERTQRKEAFGSVLIQFNVPRGNRQIPMALGPTHEEVVTDL 120 Query: 118 FRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKM 177 I SY+ LP T YQIQ KFR+E RPRFGV+R+ EFLMKDAYSF + + Y++M Sbjct: 121 ISHCISSYKQLPLTVYQIQTKFRNEERPRFGVLRTSEFLMKDAYSFSSSVKQLDEIYDRM 180 Query: 178 FVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 + +Y RIF R GLK +P+ AESGPIGGD SHEF++ AD GE + + + E Sbjct: 181 YRAYCRIFARCGLKYLPVEAESGPIGGDASHEFMIPADNGEDSIVYCE-ASGYAANMERA 239 Score = 166 bits (421), Expect = 6e-39, Method: Composition-based stats. Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 2/190 (1%) Query: 259 TSDVHNEKLFDSLPE--NKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 T D+ N + D P+ GIEVGH+F GTKY+ + A F K H + MG Sbjct: 384 TFDLRNAEAGDPCPKSGEPLTIVHGIEVGHVFKLGTKYTEALDANFLDEKEKRHPIIMGC 443 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R+VA + E+ HD G+IWP S+AP+++ +I + D E+ Y L G Sbjct: 444 YGIGVNRIVAGLAETRHDENGLIWPLSIAPYEVLVIPLNVKDDEVMQTAERYYNELKAAG 503 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 DV +DD + G +F ADL+G P +V++G K + ++E K R E ++L+ I Sbjct: 504 VDVLFDDRNARPGVKFKDADLIGIPYRVVIGGKGLQKGEIETKWRTAENAEMIALDAGIR 563 Query: 437 YASHRFSNNR 446 + + Sbjct: 564 PVLEALESRK 573 >gi|115359784|ref|YP_776922.1| tRNA synthetase, class II (G, H, P and S) [Burkholderia ambifaria AMMD] gi|115285072|gb|ABI90588.1| tRNA synthetase, class II (G, H, P and S) [Burkholderia ambifaria AMMD] Length = 402 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 80/426 (18%), Positives = 140/426 (32%), Gaps = 41/426 (9%) Query: 17 DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS 76 D + +KL L S G W P G V IR + E+ P + S Sbjct: 5 DHRVLGNKLDLF--HQQDESPGAIFWHPRGMVLYRVVEEYIRVRMRQAAFAEVRTPQIVS 62 Query: 77 ADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 DLW +SG ++ +G+ M L + ++ P IF+ +SYR+LP + + Sbjct: 63 RDLWEQSGHWEKFGRNMFSL-ESDNNPYCLKPMSCPCHVQIFKKGSRSYRDLPIRYSEFG 121 Query: 137 LKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 R E G+MR+R F DA+ + + + V I+ G + Sbjct: 122 AVHRAEPSGALHGLMRARAFTQDDAHVLCMPDQVEIE-VARFCVLLKTIYADFGFGEFDV 180 Query: 196 RAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP 255 + P ++ +DF I + A Sbjct: 181 ALSTRPAVRAGDDAVWDRSEAM-LASAARAAGLDFAIQA----------------GEGAF 223 Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD-HYVQM 314 Y + H LFD + ++ G A + DG V + Sbjct: 224 YGPKLEFH---LFDRQGRKWQCGTIQLDFVLPERLG--------AAYVAEDGAKATPVML 272 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 +G++ ++ ++G W + NI D R + Sbjct: 273 HHAVLGSLERFIGILLEHYEGWLPTWLAPDQIV---VANIGKDD---RAFADNTAFAFED 326 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 +GC V D E++ + A L P+ I G K +V ++ R G + +++ + Sbjct: 327 IGCRVLRDFRAERLPRKIFDARELAAPIVAIAGRKEALAGEVSLRLRD-GEQHVLTINDA 385 Query: 435 INYASH 440 + Y Sbjct: 386 LAYLKQ 391 >gi|322388633|ref|ZP_08062233.1| proline--tRNA ligase [Streptococcus infantis ATCC 700779] gi|321140553|gb|EFX36058.1| proline--tRNA ligase [Streptococcus infantis ATCC 700779] Length = 617 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 104/257 (40%), Positives = 146/257 (56%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKMGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWVVLDKSVASFDEIPVDV 240 Query: 237 TDFDDIISLNSIVEQWT 253 L +V Sbjct: 241 QKEIKAELLKWMVSGED 257 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLIPVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ++I L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 ASLALTDRIEEALVNKGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + ++ N+ Sbjct: 593 IKATGDTIEVHADSLLETL--EILTNK 617 >gi|331082613|ref|ZP_08331736.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA] gi|330400232|gb|EGG79874.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA] Length = 658 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 67/449 (14%), Positives = 147/449 (32%), Gaps = 38/449 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE-EQ 61 ++Y + + RD ++ L T + +G+ +P G L + I + E Sbjct: 226 LNEYLEQLEEAKKRDHNKLGREMGLFTT-VDVIGQGLPLLMPKGVIMLKELQRWIEDLED 284 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFR 119 N G + P + DL+ SG +D Y + M +++ + P +++ Sbjct: 285 NEWGYVRTKTPLMAKNDLYKISGHWDHYKEGMFVLGDEEKDKEVFALRPMTCPFQYYVYK 344 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 ++ SYR LP + + FR+E G+ R R+F + + + + + + Sbjct: 345 ANQHSYRELPIRYGETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVRPDQMVEE-FKGCL 403 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NT 237 LG+ + D + + + + Sbjct: 404 ALAKHCLETLGVAEDVTY-------------HLSKWDPENKEKYIGEPEVWEETEGHIRN 450 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 ++ A Y D++ + ++ + + + F Sbjct: 451 ILTELGVPFVEDVGEAAFYGPKVDINAKNVY---GKEDTMITIQWDALLAEQFD------ 501 Query: 298 MSATFKGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + +G + +G A + + ++P + P ++ ++ I Sbjct: 502 --MYYIDENGDKKRPYIIHRTSMGCYERTLAWLI---EKYAGLFPTWLCPEQVRVLPI-- 554 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + D ++ +L G D+ E+IG + A L P ++VG+K D V Sbjct: 555 -SEKYGDYANEVQKQLKANGIRSSVDNRSEKIGYKIREARLEKVPYMLVVGAKEEEDKVV 613 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ R G +L E I+ Sbjct: 614 SVRSRYLGDEGQKTLSEFIDAICKEIRTK 642 >gi|149006018|ref|ZP_01829747.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74] gi|147762374|gb|EDK69335.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74] Length = 617 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 106/257 (41%), Positives = 147/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L IV Sbjct: 241 QEEIKAELLKWIVSGED 257 Score = 142 bits (359), Expect = 8e-32, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + V+ + + Sbjct: 593 IKATGDTIEVHADNVLETL--EILSKK 617 >gi|168492219|ref|ZP_02716362.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04] gi|183573637|gb|EDT94165.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04] Length = 617 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 106/257 (41%), Positives = 147/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L IV Sbjct: 241 QEEIKAELLKWIVSGED 257 Score = 142 bits (359), Expect = 8e-32, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + V+ + + Sbjct: 593 IKATGDTIEVHADNVLETL--EILSKK 617 >gi|15900198|ref|NP_344802.1| prolyl-tRNA synthetase [Streptococcus pneumoniae TIGR4] gi|81855097|sp|Q97SR1|SYP_STRPN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|14971734|gb|AAK74442.1| prolyl-tRNA synthetase [Streptococcus pneumoniae TIGR4] Length = 617 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 106/257 (41%), Positives = 147/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L IV Sbjct: 241 QEEIKAELLKWIVSGED 257 Score = 142 bits (359), Expect = 8e-32, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + V+ + + Sbjct: 593 IKATGDTIEVHADNVLETL--EILSKK 617 >gi|303255041|ref|ZP_07341117.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS455] gi|302597871|gb|EFL64941.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS455] Length = 617 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 106/257 (41%), Positives = 147/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L IV Sbjct: 241 QEEIKAELLKWIVSGED 257 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +AP + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPLDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + V+ + + Sbjct: 593 IKATGDTIEVHADNVLETL--EILSKK 617 >gi|327330301|gb|EGE72050.1| threonine--tRNA ligase [Propionibacterium acnes HL097PA1] Length = 689 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 65/448 (14%), Positives = 129/448 (28%), Gaps = 45/448 (10%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + ++E R D +L L + + G+ + P G + + G Sbjct: 250 YQQRIKEAERRDHRKLGAELDLFS-FPEEIGPGLVVFHPKGAMLRHLIEEHVIARHMEAG 308 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHEEV 113 + P + L+ SG Y M R + + + Sbjct: 309 FYFVHTPEITKGGLFHTSGHLPYYAGTMFPPMLVDEERDEEGNVIRAGQEYYLKAMNCPM 368 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IFRS +SYR LP F+++ +R E G+ R R F D++++ + Sbjct: 369 HNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGE 428 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 K +L I GL + + +FI + Sbjct: 429 -IKKQIEFFLSILADFGLNDFYLELSTRESNSAKEEKFIGSDED-----------WQVAT 476 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y + ++ D++ ++S + Sbjct: 477 DTLDQVCRSTGLQLVPDPGGAAFYGPKV---SVQVRDAIGRTWQMSTIQYDFNQP----- 528 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + ADG + S +G++ V+ + +W Sbjct: 529 ---ERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAAAFPVW------LSPVQ 579 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + + + D + L G V D ++ G + A P +I G + Sbjct: 580 VRLVPVAEAFNDYVTEFAEVLGSRGIRVETDLSSDRFGKKIRNASKEKVPFILIAGGEDA 639 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYAS 439 V + R + L+E + + Sbjct: 640 EAGAVSFRLRDGSQVNGVVLDEAVRIIA 667 >gi|148983669|ref|ZP_01816988.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71] gi|147923816|gb|EDK74928.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71] gi|301799407|emb|CBW31944.1| prolyl-tRNA synthetase [Streptococcus pneumoniae OXC141] Length = 617 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 106/257 (41%), Positives = 147/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L IV Sbjct: 241 QEEIKAELLKWIVSGED 257 Score = 142 bits (359), Expect = 9e-32, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + V+ + + Sbjct: 593 IKATGDTIEVHADNVLETL--EILSKK 617 >gi|225858114|ref|YP_002739624.1| prolyl-tRNA synthetase [Streptococcus pneumoniae 70585] gi|254782917|sp|C1CB39|SYP_STRP7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|225721841|gb|ACO17695.1| prolyl-tRNA synthetase [Streptococcus pneumoniae 70585] Length = 617 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 106/257 (41%), Positives = 147/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L IV Sbjct: 241 QEEIKAELLKWIVSGED 257 Score = 142 bits (359), Expect = 9e-32, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + V+ + + Sbjct: 593 IKATGDTIEVHADNVLETL--EILSKK 617 >gi|301793532|emb|CBW35907.1| prolyl-tRNA synthetase [Streptococcus pneumoniae INV104] Length = 617 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 106/257 (41%), Positives = 147/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L IV Sbjct: 241 QEEIKAELLKWIVSGED 257 Score = 139 bits (350), Expect = 9e-31, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALIEKLEASLMGDGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + V+ + + Sbjct: 593 IKATGDTIEVHADNVLETL--EILSKK 617 >gi|229552422|ref|ZP_04441147.1| proline--tRNA ligase [Lactobacillus rhamnosus LMS2-1] gi|258539792|ref|YP_003174291.1| prolyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705] gi|229314159|gb|EEN80132.1| proline--tRNA ligase [Lactobacillus rhamnosus LMS2-1] gi|257151468|emb|CAR90440.1| Prolyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705] Length = 576 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 107/279 (38%), Positives = 157/279 (56%), Gaps = 3/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ F+P +E P AE SHK+MLR+G + Q G+Y++LPL ++ L + AII +E Sbjct: 1 MKQSRMFIPTEKEVPSSAEAKSHKMMLRSGFVRQVQAGVYAYLPLAERVLSRIEAIIDDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A++M +P L A+LW ESGRY++YG + +L +R D+ MI GPTHEE TD+ R+ Sbjct: 61 MTKIDAVKMKMPALLPAELWEESGRYETYGPNLFKLKNRQDRKMILGPTHEETFTDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ +P YQIQ KFRDE RPR+GV+R REF+M+DAYSF + Y +M + Sbjct: 121 ELKSYKRMPLVLYQIQDKFRDEDRPRYGVLRGREFIMQDAYSFTSNDQDLNTIYRQMEHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL+ + + G +GG S EF +A GE + S D+ E Sbjct: 181 YTNIFDRLGLRYRTIIGDGGAMGGKDSKEFSAIASIGEDTIVYSDS-SDYAANLEMATSM 239 Query: 241 DIISLNSIVEQWTAPYAATS--DVHNEKLFDSLPENKRV 277 + + P + +PE K + Sbjct: 240 ALPKQGVEAQAELTPVDTKDAKTIAEVAALLKIPEQKLI 278 Score = 156 bits (393), Expect = 9e-36, Method: Composition-based stats. Identities = 70/182 (38%), Positives = 101/182 (55%), Gaps = 3/182 (1%) Query: 260 SDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K + P+ + V RGIE+GHIF GT+YS M A F +G+ + MGSY Sbjct: 382 ADIRFVKEGEVSPDGQGVLKFTRGIEIGHIFKLGTRYSETMGADFLDENGRSQPIIMGSY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A+ E D G+IWP ++APF I LI + + + I L G Sbjct: 442 GIGVSRLLSAIAEQQADDHGLIWPTTIAPFDIHLIPVNLKREEQKTLTAAIGTMLEDAGY 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 V DD E+ G +FA +DL+G PL+V VG K V + VE+K R TG ++ EE+I+ Sbjct: 502 SVLVDDRNERPGVKFADSDLIGIPLRVTVGKKAVDE-IVELKLRKTGETIEVKKEELISS 560 Query: 438 AS 439 Sbjct: 561 IK 562 >gi|260589197|ref|ZP_05855110.1| threonine--tRNA ligase [Blautia hansenii DSM 20583] gi|260540278|gb|EEX20847.1| threonine--tRNA ligase [Blautia hansenii DSM 20583] Length = 658 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 67/449 (14%), Positives = 148/449 (32%), Gaps = 38/449 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE-EQ 61 ++Y + + RD ++ L T + +G+ +P G L + I + E Sbjct: 226 LNEYLEQLEEAKKRDHNKLGREMGLFTT-VDVIGQGLPLLMPKGVIMLKELQRWIEDLED 284 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFR 119 N G + P + DL+ SG +D Y + M +++ + P +++ Sbjct: 285 NEWGYVRTKTPLMAKNDLYKISGHWDHYKEGMFVLGDEEKDKEVFALRPMTCPFQYYVYK 344 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 ++ SYR LP + + FR+E G+ R R+F + + + + + + Sbjct: 345 ANQHSYRELPIRYGETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVRPDQMVEE-FKGCL 403 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NT 237 LG++ + D + + + + Sbjct: 404 ALAKHCLETLGVEEDVTY-------------HLSKWDPENKEKYIGEPEVWEETEGHIRN 450 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 ++ A Y D++ + ++ + + + F Sbjct: 451 ILTELGVPFVEDVGEAAFYGPKVDINAKNVY---GKEDTMITIQWDALLAEQFD------ 501 Query: 298 MSATFKGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + +G + +G A + + ++P + P ++ ++ I Sbjct: 502 --MYYIDENGDKKRPYIIHRTSMGCYERTLAWLI---EKYAGLFPTWLCPEQVRVLPI-- 554 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 + D ++ +L G D+ E+IG + A L P ++VG+K D V Sbjct: 555 -SEKYGDYANEVQKQLKANGIRSSVDNRSEKIGYKIREARLEKVPYMLVVGAKEEEDKVV 613 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ R G +L E I+ Sbjct: 614 SVRSRYLGDEGQKTLSEFIDAICKEIRTK 642 >gi|258568114|ref|XP_002584801.1| threonyl-tRNA synthetase [Uncinocarpus reesii 1704] gi|237906247|gb|EEP80648.1| threonyl-tRNA synthetase [Uncinocarpus reesii 1704] Length = 756 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 77/472 (16%), Positives = 139/472 (29%), Gaps = 64/472 (13%) Query: 8 LPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 L L+E R+ + L + S G LP G K +++ ++R E + G Sbjct: 311 LKFLEEAEKRNHLKIGKEQELF--FFDEVSPGCPFLLPNGTKIFNSLQKLLRTEYRKRGY 368 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + LW SG ++ Y +M +LA + P + +F +SYR Sbjct: 369 QEVQSPNMYDVGLWRTSGHWNHYKDDMFKLA-VEKREWALKPMNCPGHCIMFNHRERSYR 427 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 LP + R+E G+ R R+F D + F + ++ +F I+ Sbjct: 428 ELPLRMADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTEDQITQE-IEGLFDFLRAIY 486 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 G ++ + P E A+ + D Sbjct: 487 GLFGFSF-KLKLSTRPEKYLGKLETWNFAEAQLKEALTRFKGSD---------------- 529 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTKYSLPMSATFK 303 I E A Y D+ + D+L + + ++ F + Sbjct: 530 WEIDEGDGAFYGPKIDI---TIQDALKREFQCATIQLDYQLPQNFKLEYMTNETGRPKAT 586 Query: 304 GA------------------------DGKDHYVQMGSYGIGAM-RVVAAVIESSHDGKGI 338 A G+ V + IG+ R +IE Sbjct: 587 DAKKDETSPKGDDDNPSPDSDDGTPGPGRARPVMIHRAIIGSFERFFGILIEHFGGKWPF 646 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 + D E++ L +V D G + + L Sbjct: 647 WLSPRQILIVPVMP-------AVYDYVEELQGILRGDKLNVDIDVSGNTLQKKIRNGQLA 699 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIRED----MSLEEVINYASHRFSNNR 446 + +VG++ V I++R + + L+E R Sbjct: 700 QYNFIFVVGAQEKETRTVNIRNRDDPSSQAKGSLIPLDEARAKLHALRKERR 751 >gi|156717366|ref|NP_001096223.1| probable threonyl-tRNA synthetase 2, cytoplasmic [Xenopus (Silurana) tropicalis] gi|123909108|sp|Q0V9S0|SYTC2_XENTR RecName: Full=Probable threonyl-tRNA synthetase 2, cytoplasmic; AltName: Full=Threonine--tRNA ligase; Short=ThrRS; AltName: Full=Threonyl-tRNA synthetase-like protein 2 gi|111307891|gb|AAI21418.1| tarsl2 protein [Xenopus (Silurana) tropicalis] Length = 814 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 73/449 (16%), Positives = 155/449 (34%), Gaps = 42/449 (9%) Query: 2 RRSKYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 + K + +E RD L H S G +LP G + + I+ E Sbjct: 397 KLMKEWEQFQEEAKNRDHRKIGRDQELF--FFHDLSPGSCFFLPRGAHIYNTLTDFIKGE 454 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 E++ P + ++ LW SG + Y + M + P + +F Sbjct: 455 YQIRNFTEVASPNIYNSKLWEMSGHWQHYSENMFSFEVEKET-FALKPMNCPGHCLMFGH 513 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +S+R LP F + R+EL G+ R R F DA+ F + + + Sbjct: 514 RPRSWRELPLRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTMDQIQEEM--NGCL 571 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 +L+ +++ + + + P E + + Sbjct: 572 QFLQSVYKVFGFTFQLHLSTRPENYLGEIE-----------------IWNEAEKQLESSL 614 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + + A Y D+ K+ D++ + + ++ F +++L Sbjct: 615 NQFGEPWKLNPGDGAFYGPKIDI---KIKDAIGRYHQCATIQLD----FQLPIRFNLTYV 667 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D K V + +G++ + A++ + G WP ++P ++ +I + Sbjct: 668 SK--DGDDKKRPVIIHRAILGSVERMIAIL---CENYGGKWPFWLSPRQVMVIPVGPS-- 720 Query: 360 VCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 C + +++ + + G D D + + A L ++VG K +DS V + Sbjct: 721 -CDEYAQQVCKDVFEAGFMAEVDLDHSCTLNKKIRNAQLAQCNFILVVGEKEKTDSAVNV 779 Query: 419 KHRLTGIREDMSLEEVINYAS--HRFSNN 445 + R + ++ L I + + Sbjct: 780 RTRDNKVHGEILLTSAIEKLKTLKKLRSK 808 >gi|295109520|emb|CBL23473.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Ruminococcus obeum A2-162] Length = 653 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 66/447 (14%), Positives = 152/447 (34%), Gaps = 35/447 (7%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++ + + RD ++ + T + +G+ +P G + + I +E+ Sbjct: 226 LKEHLEQMEEAKRRDHNKLGREMKIFTT-VDVIGQGLPLIMPNGVIMMQELQRWIEDEET 284 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA--MIYGPTHEEVMTDIFRS 120 + G + P + +DL+ SG +D Y M L D + P ++++ Sbjct: 285 KRGYVRTKTPLMAKSDLYKISGHWDHYKDGMFVLGDEENDKEVFALRPMTCPFQYYVYKA 344 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 SYR+LP + + FR+E G+ R R+F + + + + K + Sbjct: 345 EQHSYRDLPLRYGETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVRPDQMVKE-FKDCIA 403 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 LG++ D+++ T + + + Sbjct: 404 LAQYCLQVLGVEE------------DVTYHLSKWDPTNREKYIGEPEVWEETEGHIRQML 451 Query: 240 DDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 ++ + A Y D++ + ++ + + + F Sbjct: 452 QELNIPFTEDVGEAAFYGPKVDINAKNVY---GKEDTMITIQWDALLAEQFD-------- 500 Query: 300 ATFKGADGKDHYVQM-GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + +G + +G A + + ++P + P ++ +I I Sbjct: 501 MYYIDENGDKKRPYIIHRTSMGCYERTLAWLI---EKYAGMFPTWLCPEQVRVIPI---S 554 Query: 359 QVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + +K+ A++ + G D E++G + A L P ++VG+K + KV + Sbjct: 555 EKFNAYADKVEAQMKEAGIRCSVDRRSEKMGYKIREARLERVPYMLVVGAKEEEEGKVSV 614 Query: 419 KHRLTGIREDMSLEEVINYASHRFSNN 445 + R G L + ++ N Sbjct: 615 RSRYLGDEGMKDLGDFMSAIKEEIKNK 641 >gi|255582427|ref|XP_002532001.1| threonyl-tRNA synthetase, putative [Ricinus communis] gi|223528332|gb|EEF30374.1| threonyl-tRNA synthetase, putative [Ricinus communis] Length = 658 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 71/445 (15%), Positives = 143/445 (32%), Gaps = 58/445 (13%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIH-QHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L +E R D L L + I + G+ W P G + ++ Sbjct: 265 KAYLHFKEEAKRRDHRRLGQDLDLFS--IQDEAGGGLVFWHPKGAIVRHIIEDSWKKIHI 322 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + P + ADLW SG D Y + M D+ P + +++ + Sbjct: 323 EHDYDLLYTPHVAKADLWKISGHLDFYRENMYDQMKIEDENYQLRPMNCPYHILVYKRKL 382 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+ P ++ +R EL G+ R R F + + ++ Y Sbjct: 383 NSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQCILVLSFIDLQSG--LLFQLIPRY 440 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + P+ + C FPI + D Sbjct: 441 SPVPSFNSHSFFPVCLS--------------------AILVCLWCTARFPICWKLFSLQD 480 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 +++L DV L + ++ F ++ T Sbjct: 481 LLALMHG------------DVEIVLLNHNC---SLKFLMQVD----FNLPQRFD----IT 517 Query: 302 FKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 + ++ + + +G+M V+ + +P ++P ++ ++ + Sbjct: 518 YVDSNSEKKRPIMIHRAVLGSMERFFGVLI---EHYAGDFPLWLSPIQVRVLPVT---DT 571 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + C ++ ++L + G GE++ A+ PL +VG K V V I+ Sbjct: 572 QLEYCREVTSKLKENGIRTEL-FHGERLPKLIRNAEKQKIPLMAVVGPKEVETQSVTIRS 630 Query: 421 RLTGIREDMSLEEVINYASHRFSNN 445 R +G M++++ I+ Sbjct: 631 RFSGELGTMTIDDFISRIKSAIEKR 655 >gi|19746872|ref|NP_608008.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS8232] gi|81847886|sp|Q8NZB4|SYP_STRP8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|19749114|gb|AAL98507.1| putative prolyl-tRNA synthetase [Streptococcus pyogenes MGAS8232] Length = 618 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 109/307 (35%), Positives = 160/307 (52%), Gaps = 19/307 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQSKLLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R++ I GPTHEE T + R+ Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNSDFILGPTHEETFTTLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHHNYEDLDVTYEDYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA------DTGETQVFCSKDFMDFPIPS 234 Y IF R GL + + G +GG S EF+ + D D P Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAITPARTDLDRWVVLDKSIASMDDIPKEV 240 Query: 235 ENTDFDDIISLNSIVEQWTAP-----YAATSDVHN--------EKLFDSLPENKRVSARG 281 ++ + E A YAA ++ D+L E + + Sbjct: 241 LEEIKAELAAWMISGEDTIAYSTESSYAANLEMATNEYKPSSKVAAEDALVEVETPHCKT 300 Query: 282 IEVGHIF 288 I+ F Sbjct: 301 IDEVAAF 307 Score = 142 bits (359), Expect = 9e-32, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 104/199 (52%), Gaps = 16/199 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ V RGIEVGHIF GT+YS M AT +G+ + Sbjct: 414 FQAEYVDIREVKEGEMSPDGHGVLQFARGIEVGHIFKLGTRYSDSMGATILDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P +APF + LI + DQ Sbjct: 474 VMGCYGIGVSRILSAVIEQHARLFVNKTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQ 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 V +D K+ A L G DV DD E++GS+F+ +DL+G P++V VG K ++ VEIK Sbjct: 534 VAQDLTAKLEADLMAKGYDVLTDDRNERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIK 592 Query: 420 HRLTGIREDMSLEEVINYA 438 + TG +++ E +I Sbjct: 593 IKATGDSIEVNAENLIETL 611 >gi|315453026|ref|YP_004073296.1| prolyl-tRNA synthetase [Helicobacter felis ATCC 49179] gi|315132078|emb|CBY82706.1| prolyl-tRNA synthetase [Helicobacter felis ATCC 49179] Length = 577 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 107/259 (41%), Positives = 147/259 (56%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+ F P +E P+DA + SH+ M++ G + Q G+Y +LPLG K L + A+++E Sbjct: 1 MRFSQLFAPTTKEVPKDAVLKSHQFMVQGGYLQQMGSGLYHFLPLGHKVLSKIRAVVKEV 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E ++ + A LW ESGR++ YGKE+L DR + + PTHEE +T I +S Sbjct: 61 MDSYGAQECTLGFVVPASLWQESGRFEQYGKELLSFPDRKNNLCVLSPTHEEAITQIAKS 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 HIKSY+ LP YQI KFRDE+RPRFG+MR+REF+MKDAYSF + E + +M + Sbjct: 121 HIKSYKQLPLNLYQIHTKFRDEIRPRFGLMRAREFVMKDAYSFHASTECLDKEFERMHAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF RLGL + A+SG IGG S EF+VLA GE V + Sbjct: 181 YSEIFSRLGLNFRAVEADSGAIGGSKSKEFVVLAACGEDSVIVCQKCNYAANVEIAKRAK 240 Query: 241 DIISLNSIVEQWTAPYAAT 259 N Q+ + Sbjct: 241 RPEPDNVPKAQFAKFHTPN 259 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 54/182 (29%), Positives = 95/182 (52%), Gaps = 3/182 (1%) Query: 261 DVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ + D+ PE + R IEVGHIF G KYS + A + +G+ Y +MG YG Sbjct: 394 DIAQARPEDACPECQGTLSEQRSIEVGHIFKLGNKYSKSLEARYLDQEGQLQYFEMGCYG 453 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 IG R+++A++E + D KG +W + APF++ ++ + D E++Y L G D Sbjct: 454 IGVSRLMSAILEQNSDEKGCVWSKTSAPFEVVVLVANSKDSALESLGEELYQELKGAGVD 513 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 V DD ++ G++ A +L+G +IVG + + + E+ R + ++ E +++ Sbjct: 514 VLLDDRIDRFGAKMADFELIGCSHALIVGKQALE-GQFELIARQGLSKRVIAREAIVSTL 572 Query: 439 SH 440 Sbjct: 573 LE 574 >gi|321472321|gb|EFX83291.1| hypothetical protein DAPPUDRAFT_127919 [Daphnia pulex] Length = 406 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 123/432 (28%), Positives = 206/432 (47%), Gaps = 40/432 (9%) Query: 23 HKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVE 82 KL+ G++ Q+S G+++ PLG ++L+ + I+ +E G ++ +P L + +LW Sbjct: 5 QKLLNEMGIVRQNSPGLFTLTPLGVRSLEKLVKIVDDELKYVGCQKLQLPILTAGNLWKT 64 Query: 83 SGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH-IKSYRNLPFTFYQIQLKFRD 141 +GR++S G E+L + DR+ + + PTHEE +TD S +++ LP YQI KFRD Sbjct: 65 TGRWESTGSELLTIKDRHARDYVLSPTHEEAITDFVASLPQLTHKQLPLKLYQITSKFRD 124 Query: 142 ELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 E++PRFG++R REF MKD Y+FD T E + +Y+ + +Y RIF RL + + + +G Sbjct: 125 EIKPRFGLLRGREFTMKDLYTFDKTVEAAHETYDLICTAYNRIFQRLNVPFVKVVGSTGN 184 Query: 202 IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSD 261 IGG SHE+ + GE + + ++ Sbjct: 185 IGGLSSHEYHFPSSIGEDDLKICSACNS---------------------------GSNAE 217 Query: 262 VHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGA 321 + + + +GIEV H F GTKYS ++A F DG QMG YGIG Sbjct: 218 IATTDVCSKCG-SPVKQTKGIEVAHTFLLGTKYSQILNALFSAEDGSRSVCQMGCYGIGI 276 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIK--AHDQVCRDACEKIYARLSKVGC-- 377 R++AA +E I WP +AP+ + ++ K + ++ + ++ + Sbjct: 277 SRILAASVEVLGTDSEIRWPKLIAPYSVCVVAPKGGSKEESAIQLAHFLANQIDQ--IQP 334 Query: 378 ---DVFWDDM-GEQIGSQFAVADLLGFPLQVIVGSKFVSD-SKVEIKHRLTGIREDMSLE 432 DV DD +G + A +G+P ++VG K VE+ + ++ Sbjct: 335 FMQDVILDDRMTTTVGKKLMEAKRVGYPYIIVVGKKSSQPVPLVELHDLNQNTQNVYTVA 394 Query: 433 EVINYASHRFSN 444 E+ +Y N Sbjct: 395 ELFDYLKQTVKN 406 >gi|159039093|ref|YP_001538346.1| prolyl-tRNA synthetase [Salinispora arenicola CNS-205] gi|189083509|sp|A8LYE7|SYP_SALAI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157917928|gb|ABV99355.1| prolyl-tRNA synthetase [Salinispora arenicola CNS-205] Length = 584 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 95/226 (42%), Positives = 130/226 (57%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S L L+E+P DAE+ SH+L+LR G + + + G Y+WLPLG+ LD V +IR E Sbjct: 4 RMSTLLLRTLREDPADAEVPSHRLLLRAGYLRRAAPGGYTWLPLGKLVLDRVAEVIRTEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 G E+ P L A+ + SGR+ YG +++ L DR + PTHEE + + Sbjct: 64 LAIGDQEVHFPALLPAEPYRTSGRWTEYGDDLITLVDRRGAEHLLAPTHEEPAALLVKEL 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SYR+ P +QIQ KFRDE RPR G++R REFLMKDAYSFDL G + +Y++ +Y Sbjct: 124 FTSYRDFPVGIFQIQTKFRDEARPRAGLLRGREFLMKDAYSFDLDEAGLQAAYDRHRSAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF 227 +IF RLGL + A SG +GG S EF+ + GE Sbjct: 184 QKIFARLGLDYAVVHAVSGAMGGSASEEFLATSKIGEDVYVGCTAC 229 Score = 127 bits (318), Expect = 5e-27, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 93/191 (48%), Gaps = 7/191 (3%) Query: 258 ATSDVHNEKLFDSLPENK---RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 T + + D P + RGIE+GHIF G +Y+ + G +G+ M Sbjct: 396 GTIEAAEVRPGDPCPACRTGQLTLRRGIEIGHIFQLGRRYTDAFTVDVLGPEGQSVRPTM 455 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G YGIG R VA + E HD +G++WP VAP + L+ + + RL++ Sbjct: 456 GCYGIGVSRAVAVIAEQHHDERGLVWPTEVAPCDVHLVAAGRG--PQVETALGLGNRLAE 513 Query: 375 VGCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G V DD G G +F A+L+G P V+VG + ++D E++ R +G R D+ ++ Sbjct: 514 AGLRVLVDDRGHVSAGVKFTDAELVGIPRTVVVGRR-LADGYAEVRDRPSGKRADVRVDA 572 Query: 434 VINYASHRFSN 444 ++ + + + Sbjct: 573 LVEHLVNEVHS 583 >gi|260437371|ref|ZP_05791187.1| threonine--tRNA ligase [Butyrivibrio crossotus DSM 2876] gi|292810283|gb|EFF69488.1| threonine--tRNA ligase [Butyrivibrio crossotus DSM 2876] Length = 651 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 70/446 (15%), Positives = 152/446 (34%), Gaps = 35/446 (7%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L L++ R D ++ L T + +G+ +P G++ + + I +E++ Sbjct: 227 KAYLEHLEDIKRRDHNKLGREMELFTT-VDVIGQGLPLIMPKGERIIRTLQRWIEDEEDS 285 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFRSH 121 G + P + +DL+ SG +D Y M +++ + P ++++ Sbjct: 286 RGYVRTKTPLMAKSDLYKISGHWDHYKDGMFVLGDEEKDKEVFALRPMTCPFQYYVYKAS 345 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 KSYR+LP + + FR+E G+ R R+F + + + + K + Sbjct: 346 QKSYRDLPLRYGETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVRPDQMVKE-FKDCIAL 404 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 LG++ S A+ G + + + + Sbjct: 405 AQYCLRTLGVEEDVTYHLSR----------WDPANPGN-KYIGKPEVWEDTEQHIRNVLN 453 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 ++ A Y D++ + ++ + + + F Sbjct: 454 ELKIPFVEDIGEAAFYGPKVDINAKNVY---GKEDTMITIQWDALLAEQFD--------M 502 Query: 301 TFKGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G + +G A + + ++P + P ++ ++ I Sbjct: 503 YYIDEKGDKVRPYIIHRTSMGCYERTLAWLI---EKYAGMFPTWLCPEQVRVLPISDK-- 557 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D + + A++ + V D E++G + A L P ++VG K V ++ Sbjct: 558 -YADYADSVAAKIREHKIYVEADHRAEKLGYKIRDARLARVPYILVVGEKEQETGVVSVR 616 Query: 420 HRLTGIREDMSLEEVINYASHRFSNN 445 R G LE+ IN Sbjct: 617 SRFLGDEGQKPLEQFINDICEEIRTK 642 >gi|255514109|gb|EET90372.1| threonyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 560 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 76/433 (17%), Positives = 130/433 (30%), Gaps = 43/433 (9%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD L L + + S + W P G+ + +R + E+S P L Sbjct: 164 RDHRSIGESLDLYS--FQEVSPSMVYWHPNGRIIYQQLIEFMRGMERLYDYKEISTPALA 221 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 + LW SG D Y M + D P + I++S SY+ LPF Sbjct: 222 NIALWHVSGHIDYYKDNMF-IIDDGSSEFGLKPMNCPSTILIYKSRRWSYKELPFRTAIF 280 Query: 136 QLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIP 194 +R E+ G+ R +E D + F K + R++ GLK Sbjct: 281 DKLYRREVSGALSGLFRVQELTQDDGHIFVSAEGVEKE-ITLLLELVKRVYGVFGLKYY- 338 Query: 195 MRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTA 254 + + P E D S + I E+ A Sbjct: 339 AKLSTMPDEHLGDEE-----------------LWDKATESIKRALETNGMKYEIKEKEGA 381 Query: 255 PYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 Y D E DS + + ++ FG + G DGK+H + Sbjct: 382 FYGPKIDFDIE---DSQGRLWQCATIQLDYQLPKRFG--------IVYTGEDGKEHTPVI 430 Query: 315 GSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 I R V ++E + A + E ++ ++ Sbjct: 431 IHRAILGSIERFVGILVEHYQGKLPLWLSPVQARVISI-------SEENNSYAESVFEKI 483 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 G D + + A + P V++G++ + ++ R + LE Sbjct: 484 KLEGIRAEMDGSDHTLEYKIRSAQMQKIPYIVVIGNREREKGSISVRMRSGKQENGIKLE 543 Query: 433 EVINYASHRFSNN 445 ++ S Sbjct: 544 PLLESIKKEISAR 556 >gi|322386937|ref|ZP_08060561.1| proline--tRNA ligase [Streptococcus cristatus ATCC 51100] gi|321269219|gb|EFX52155.1| proline--tRNA ligase [Streptococcus cristatus ATCC 51100] Length = 616 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 110/301 (36%), Positives = 161/301 (53%), Gaps = 14/301 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV----LADTGETQVFCSKDFMDFPIPSEN 236 Y +IF R L + + G +GG S EF+ D V IP+E Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMAITPDRTDLNRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT-------APYAATSDVHNEKLFDS---LPENKRVSARGIEVGH 286 + L +V + YAA ++ + + E + V + Sbjct: 241 QEEIKAELLKWMVSGEDTIAYSSESSYAANLEMATNAYKPNKKVVTEAELVRVETPDCKT 300 Query: 287 I 287 I Sbjct: 301 I 301 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 16/195 (8%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 D+ + + P+ + ARGIE+GHIF GT+YS M+A +G+ + MG Y Sbjct: 419 VDIREVREGEVSPDGQGILKFARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPMIMGCY 478 Query: 318 GIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 GIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 479 GIGVSRLLSAVMEQHARLFVNKTPKGEFRYAWGINFPKELAPFDVHLIPVNVKDEEALAL 538 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 ++I A L G +V DD E+ G +F+ +DL+G P++V VG K ++ VE+K + TG Sbjct: 539 TDQIEANLLSAGYEVLVDDRNERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVKIKATG 597 Query: 425 IREDMSLEEVINYAS 439 ++ + ++ S Sbjct: 598 DTIEVHADNLLETLS 612 >gi|126172877|ref|YP_001049026.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS155] gi|125996082|gb|ABN60157.1| tRNA synthetase, class II (G, H, P and S) [Shewanella baltica OS155] Length = 403 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 65/429 (15%), Positives = 138/429 (32%), Gaps = 40/429 (9%) Query: 18 AEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSA 77 + +L L + G+ W P G ++ +R R G E++ P Sbjct: 4 HREIAEQLDLF--HSEPQAPGMIFWHPNGWALFRDIQEHMRRVYRRNGFEEVNTPVFMKK 61 Query: 78 DLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 +LW SG D + + M + + + P +F+ + S+R+LP ++ Sbjct: 62 ELWQTSGHMDMFAENMFFGGGKENIDEYVLKPMSCPAHILLFKRGVHSHRDLPLRLFEFG 121 Query: 137 LKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 L R+E G +R+R+F DA+ F ++ +++ G ++ + Sbjct: 122 LVHRNESSGSLNGCLRARQFTQDDAHVFCC-WSQAEEEIRGFLQRAKQVYGDYGYHNLDV 180 Query: 196 RAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP 255 + + P S E A C + D + A Sbjct: 181 KISTKPEKSLGSDEQWCRAQK-LLDSACHIEGFDAEYQA----------------GEGAF 223 Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV-QM 314 Y ++ L DS+ + + F ++ + G+ M Sbjct: 224 YGPKIEL---SLTDSMGRRWQCGTIQFD----FNLPERFD----VQYANEQGEFERPVIM 272 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G++ ++ G +W + I + ++ ++ Sbjct: 273 HQAMYGSIERWLGILLEVSQGNLPVW------LHPVPVAIASVNESNSQFVRQLATLCLA 326 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 V D + + P + VG K ++++V +K R G+ + L E+ Sbjct: 327 RDIRVLVDISQNSVARKMKRFHKQKVPYILTVGDKEEAENRVSVKCRKDGVITHVPLAEL 386 Query: 435 INYASHRFS 443 +Y + + Sbjct: 387 ADYLADKLE 395 >gi|222874274|gb|EEF11405.1| predicted protein [Populus trichocarpa] Length = 191 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 97/189 (51%), Positives = 136/189 (71%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S++F+ L+E P DAE+ SHKLM R G+I + GIY+++P+G + + V AI+REE Sbjct: 1 MKASQFFISTLKEAPADAEVVSHKLMTRAGLIKKLGAGIYNYMPMGLRVIRKVEAIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 NR GA+E+++P +Q A++W E+GR++ G E+LR+ DR+ + + PT EEV+TDI R Sbjct: 61 MNRAGAVEVTMPVVQPAEMWEETGRFEKMGPELLRIKDRHGRDFVIQPTSEEVVTDIARQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP FYQIQ KFRDE RPRFG+MR REF+MKDAYSFD + ++ SY M + Sbjct: 121 ELKSYKQLPKNFYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDKDRDTAQISYQTMRAA 180 Query: 181 YLRIFHRLG 189 Y RIF R G Sbjct: 181 YKRIFDRFG 189 >gi|212697111|ref|ZP_03305239.1| hypothetical protein ANHYDRO_01677 [Anaerococcus hydrogenalis DSM 7454] gi|212675886|gb|EEB35493.1| hypothetical protein ANHYDRO_01677 [Anaerococcus hydrogenalis DSM 7454] Length = 447 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 102/232 (43%), Positives = 156/232 (67%), Gaps = 1/232 (0%) Query: 8 LPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 +P L+++P+DAE SHKL++R I + S G+YS+LPLG + ++ + I+R+ + +I Sbjct: 1 MPTLRDDPQDAETQSHKLLVRGAFIRKTSSGVYSYLPLGMRVINKIENIVRKSMEKYDSI 60 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 E+S LQS D+W +SGR+ ++G EM ++ DR+D+ GPT EE T + + + SY+ Sbjct: 61 EVSTSVLQSKDIWEKSGRWQNFGPEMFKIKDRHDREYCLGPTAEEQFTSLIKDELNSYKQ 120 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 LP YQI KFRDE RPRFG+ RSR+F+MKDAYSFD+ EG + SY KM+ +Y+ +F Sbjct: 121 LPLNLYQIVSKFRDEKRPRFGINRSRDFIMKDAYSFDVDMEGLEKSYQKMWDAYVEVFDA 180 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 LGL + +SG +GG+ SHEF+ LA+TGE ++F +++ D+ E+ F Sbjct: 181 LGLDYKIVEGDSGAMGGNTSHEFMALAETGEGEIFYTEN-SDYAATDESAKF 231 Score = 39.0 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 25/44 (56%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 + + ARGIEVG+IF GTKYS + A F +GK + G Sbjct: 390 GKEELKIARGIEVGNIFQLGTKYSESLEAYFLDENGKQKTIYNG 433 >gi|21911224|ref|NP_665492.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS315] gi|28896602|ref|NP_802952.1| prolyl-tRNA synthetase [Streptococcus pyogenes SSI-1] gi|81847409|sp|Q8K5S7|SYP_STRP3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|21905437|gb|AAM80295.1| putative prolyl-tRNA synthetase [Streptococcus pyogenes MGAS315] gi|28811856|dbj|BAC64785.1| putative prolyl-tRNA synthetase [Streptococcus pyogenes SSI-1] Length = 618 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 109/307 (35%), Positives = 160/307 (52%), Gaps = 19/307 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQSKLLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R++ I GPTHEE T + R+ Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNSDFILGPTHEETFTTLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHHNYEDLDVTYEDYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA------DTGETQVFCSKDFMDFPIPS 234 Y IF R GL + + G +GG S EF+ + D D P Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAITPARTDLDRWVVLDKSIASMDDIPKEV 240 Query: 235 ENTDFDDIISLNSIVEQWTAP-----YAATSDVHN--------EKLFDSLPENKRVSARG 281 ++ + E A YAA ++ D+L E + + Sbjct: 241 LEEIKAELAAWMISGEDTIAYSTKSSYAANLEMATNEYKPSSKVAAEDALAEVETPHCKT 300 Query: 282 IEVGHIF 288 I+ F Sbjct: 301 IDEVAAF 307 Score = 142 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 104/199 (52%), Gaps = 16/199 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ V RGIEVGHIF GT+YS M AT +G+ + Sbjct: 414 FQAEYVDIREVKEGEMSPDGHGVLQFARGIEVGHIFKLGTRYSDSMGATILDENGRTVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P +APF + LI + DQ Sbjct: 474 VMGCYGIGVSRILSAVIEQHARLFVNKTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQ 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 V +D K+ A L G DV DD E++GS+F+ +DL+G P++V VG K ++ VEIK Sbjct: 534 VAQDLTAKLEADLMAKGYDVLTDDRNERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIK 592 Query: 420 HRLTGIREDMSLEEVINYA 438 + TG +++ E +I Sbjct: 593 IKATGDSIEVNAENLIETL 611 >gi|225856022|ref|YP_002737533.1| prolyl-tRNA synthetase [Streptococcus pneumoniae P1031] gi|254782921|sp|C1CIE5|SYP_STRZP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|225724634|gb|ACO20486.1| prolyl-tRNA synthetase [Streptococcus pneumoniae P1031] Length = 617 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 106/257 (41%), Positives = 147/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKIPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L IV Sbjct: 241 QEEIKAELLKWIVSGED 257 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 + D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTSEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + V+ + + Sbjct: 593 IKATGDTIEVHADNVLETL--EILSKK 617 >gi|94989304|ref|YP_597405.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS9429] gi|94993193|ref|YP_601292.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS2096] gi|114152260|sp|Q1J9R3|SYP_STRPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|114152261|sp|Q1JJW2|SYP_STRPC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|94542812|gb|ABF32861.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS9429] gi|94546701|gb|ABF36748.1| Prolyl-tRNA synthetase [Streptococcus pyogenes MGAS2096] Length = 618 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 109/307 (35%), Positives = 159/307 (51%), Gaps = 19/307 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQSKLLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R++ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHHNYEDLDVTYEDYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA------DTGETQVFCSKDFMDFPIPS 234 Y IF R GL + + G +GG S EF+ + D D P Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAITPARTDLDRWVVLDKSIASMDDIPKEV 240 Query: 235 ENTDFDDIISLNSIVEQWTAP-----YAATSDVHN--------EKLFDSLPENKRVSARG 281 ++ + E A YAA ++ D+L E + + Sbjct: 241 LEEIKAELAAWMISGEDTIAYSTESSYAANLEMATNEYKPSSKVAAEDALAEVETPHCKT 300 Query: 282 IEVGHIF 288 I+ F Sbjct: 301 IDEVAAF 307 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 105/199 (52%), Gaps = 16/199 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ V RGIEVGHIF GT+YS M AT +G+ + Sbjct: 414 FQAEYVDIREVKEGEMSPDGHGVLQFARGIEVGHIFKLGTRYSDSMGATILDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE G+ +P +APF + LI + DQ Sbjct: 474 VMGCYGIGVSRILSAVIEQHARLFVNKTPKGDYRYAWGVNFPKELAPFDVHLITVNVKDQ 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 V +D K+ A L+ G DV DD E++GS+F+ +DL+G P++V VG K ++ VEIK Sbjct: 534 VAQDLTAKLEADLTAKGYDVLTDDRNERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIK 592 Query: 420 HRLTGIREDMSLEEVINYA 438 + TG +++ E +I Sbjct: 593 IKATGASIEVNAENLIETL 611 >gi|48477666|ref|YP_023372.1| threonyl-tRNA synthetase [Picrophilus torridus DSM 9790] gi|48430314|gb|AAT43179.1| threonyl-tRNA synthetase [Picrophilus torridus DSM 9790] Length = 710 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 76/466 (16%), Positives = 152/466 (32%), Gaps = 44/466 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +++ + RD ++ L + + G+ + P G + + + E Sbjct: 260 LNEFLKNREEAMKRDHRRIGQEMDLFI-FDTERAPGMPFYTPNGAVIRNELIKYMGEINA 318 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 R E+ + +W +SG YD Y +M N + P + IF+ I Sbjct: 319 RNNWQEVWTAHVFRDLIWKQSGHYDKYKNDMFLFQLENGEHYGLKPMNCPGHITIFQRGI 378 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKH------SYN 175 SYR++P + + +R E G+ R R F + D + F + + + Sbjct: 379 YSYRDMPVKYCEPGTVYRYEKSGEMGGLTRPRGFTIDDGHGFLRQDQILEEVSSLLGMIH 438 Query: 176 KMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHE-----FIVLADTGETQVFCSKD---- 226 ++F + L S+ + + F++ A G +++ C K Sbjct: 439 EVFNTILGNVEFSFDLSVMDKNSPENYLIEYKCRNCGNVFMLRA--GSSKIECPKCSSKD 496 Query: 227 ------FMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR 280 D + + A Y DVH + D+L ++S Sbjct: 497 LEMDFSMWDAATENLRKALESRNLNYKEYPGEAAFYGPKIDVH---VKDALNRFWQLSTI 553 Query: 281 GIEVGHIFYFGTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGII 339 ++ F + +DGK + G+ A++ ++GK Sbjct: 554 QLDFFMPINFD--------LYYINSDGKKERPVIIHRAIYGSYERFIAILLEHYNGKLPT 605 Query: 340 WPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLG 399 W + + I + + + E I + K D E I + + + Sbjct: 606 WLSPIQSYVIPV------SENYNEYAESINSLFVKNNIRSKIDLSSETISKKIKMIRKMR 659 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 ++VG K + V I++R +M + E I S+ Sbjct: 660 PSYIIVVGEKEEHNKSVSIRNRKDK-TIEMPVNEFIEKIKDEISSR 704 >gi|225026720|ref|ZP_03715912.1| hypothetical protein EUBHAL_00972 [Eubacterium hallii DSM 3353] gi|224955955|gb|EEG37164.1| hypothetical protein EUBHAL_00972 [Eubacterium hallii DSM 3353] Length = 650 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 74/444 (16%), Positives = 150/444 (33%), Gaps = 37/444 (8%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE-EQNRTG 65 L L+E RD ++ L T + +G+ LP G K + + I + E N G Sbjct: 230 LKYLEEIKLRDHNRLGREMELFTT-VDVIGQGLPLLLPKGAKIIQTLQRWIEDLEDNEWG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA--MIYGPTHEEVMTDIFRSHIK 123 + P + +DL+ SG +D Y + M L D + + P +++ K Sbjct: 289 YVRTKTPLMAKSDLYKISGHWDHYKEGMFVLGDEENDKEVLALRPMTCPFQYYCYKNTQK 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP+ + FR+E G+ R R+F + + + + + Sbjct: 349 SYRDLPYRMSETSTLFRNEDSGEMHGLTRVRQFTISEGHLIIRPDQTNDEL--------- 399 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + L + D+++ + + ++ + + D Sbjct: 400 ----KGCLHLAQYCLGVLGVQDDVTYRLSKWDPNNKEKYLGDDEYWETTQDAIRNILVDQ 455 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 E A Y D+ + ++ K + I + + Sbjct: 456 GVPFVEAEGEAAFYGPKIDIQAKNVY-----GKEDTMITI------QLDCAIAENFDMYY 504 Query: 303 KGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 +G + +G A + + +P + P ++ ++ I + Sbjct: 505 IDQNGDKQRPYVIHRTSMGCYERTLAWLI---EKYAGKFPTWLCPEQVRVLPI---SEKF 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 D E++ L + G D+ E+IG + A L P ++VG++ KV ++ R Sbjct: 559 ADYAEEVNKELKRNGILSTVDNRSEKIGYKIREARLQKLPYMLVVGAQEQETGKVSVRSR 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 G L++ I+ Sbjct: 619 FAGDEGQKDLKDFISAICEEIRTK 642 >gi|148988673|ref|ZP_01820106.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73] gi|147925874|gb|EDK76949.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73] Length = 600 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 68/392 (17%), Positives = 135/392 (34%), Gaps = 33/392 (8%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 K +L + +E RD +L L MI + +G+ WLP G + I ++ Sbjct: 229 KNYLQMREEAKERDHRKLGKELDLF--MISQEVGQGLPFWLPNGATIRRELERYIVNKEL 286 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSH 121 +G + P L S +L+ SG +D Y ++M D D + + P + +F+ H Sbjct: 287 ASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHH 346 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 + SYR LP +I + R E ++ + + +TPE + + + Sbjct: 347 VHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLI 406 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 + ++ L R + D E + D+ Sbjct: 407 IDVYEDFNLTDYRFRLSLRD-----PQDTHKYFDNDEM--------WENAQTMLRAALDE 453 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y D+ ++ +L + + +S ++ F ++ Sbjct: 454 MGVDYFEAEGEAAFYGPKLDI---QIKTALGKEETLSTIQLD----FLLPERFD----LK 502 Query: 302 FKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + GADG+DH M G+ + I + + + I ++ Sbjct: 503 YIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTL----IPVSNEKH 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFA 393 D ++ +L G D+ E++ + Sbjct: 559 VDYAWEVAKKLRDRGVRADVDERNEKMQFKIR 590 >gi|332523321|ref|ZP_08399573.1| proline--tRNA ligase [Streptococcus porcinus str. Jelinkova 176] gi|332314585|gb|EGJ27570.1| proline--tRNA ligase [Streptococcus porcinus str. Jelinkova 176] Length = 617 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 100/242 (41%), Positives = 148/242 (61%), Gaps = 2/242 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S GIY++LPL + ++ + I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGIYAYLPLANRTIEKLKGIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L +ADLW ESGRY++YG+++ +L +R I GPTHEE T + R Sbjct: 61 FDKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRESSDFILGPTHEETFTTLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQAKYRDEKRPRNGLLRTREFIMKDGYSFHQNDEDLDITYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL+ + + G +GG S EF+ + + +D IP+ + + Sbjct: 181 YEAIFTRAGLEFKGIIGDGGAMGGKDSQEFMAITP--DRTDLNRWLVLDKSIPNLESIPE 238 Query: 241 DI 242 D+ Sbjct: 239 DV 240 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 16/217 (7%) Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKY 294 T + V +A D+ K + P+ V RGIE+GHIF GT+Y Sbjct: 396 TGANKDGYHLIGVNPERDFHAEYVDIREVKEGEISPDGHGVLRFARGIEIGHIFKLGTRY 455 Query: 295 SLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHD-------------GKGIIWP 341 S + AT +G+ + MG YGIG R+++AVIE GI +P Sbjct: 456 SKSLGATILDENGRAVPIVMGCYGIGVSRILSAVIEQHARLFVNKTPKGDYRFAWGINFP 515 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 + +APF + LI + DQ +D K+ L G +V DD E++GS+F+ +DL+G P Sbjct: 516 EELAPFDVHLITVNTKDQDAQDLTSKVEHDLMTKGYEVLTDDRNERVGSKFSDSDLIGLP 575 Query: 402 LQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 +++ VG K S+ VEIK + +G ++ + +I Sbjct: 576 IRITVGKK-ASEGIVEIKIKASGDSIEVHADNIIETL 611 >gi|47221603|emb|CAF97868.1| unnamed protein product [Tetraodon nigroviridis] Length = 604 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 76/470 (16%), Positives = 149/470 (31%), Gaps = 41/470 (8%) Query: 4 SKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 SK L ++++ + I ++ + S G +LP G + + I+ E R Sbjct: 142 SKLRLQLIEDQTSGSSITVYRHDQELFFFNDVSPGSCFFLPKGAHIYNTLTDFIKGEYRR 201 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ PTL S LW SG ++ Y M + P + +F ++ Sbjct: 202 RGFTEVVTPTLYSTALWERSGHWEHYSDNMFTVTSEGSHTYALKPMNCPAHCLMFEQRVR 261 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 S++ LP + R+EL G+ R R F DA+ F + + Sbjct: 262 SWKELPLRWADFGALHRNELSGALGGLTRVRRFCQDDAHIFCAPEQLETEIVSC-LDFVR 320 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF------------ 230 ++ G + + P E A+ G Sbjct: 321 HVYQVFGFSFHCL-LSTRPTPCLGEPEQWDNAEQGAAAGEEPAAVWPTLGAEPRRRSLLW 379 Query: 231 ----------PIPSENTDFDDIISLNSIVEQWTAPYAATS---DVHNEKLFDSLPENKRV 277 P P S +S E + + ++ D++ + Sbjct: 380 TKGEQEEDLGPGPGRRRSVGYFTSQSSPDEGEEGRQTRSCVLSPQIDIQIRDAIGRQHQC 439 Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGK 336 + ++ F ++ + G DG+ H + +G++ + A++ + Sbjct: 440 ATIQLD----FQLPLRFD----LQYVGPDGQLHRPVMIHRAVLGSLERMIAILA---ENF 488 Query: 337 GIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVA 395 G WP ++P ++ +I + + + G V + D G + + A Sbjct: 489 GGKWPLWLSPAQVMVIPVGGDSESYSKQVSGVVQEFRHAGFMVDLNSDQGATLNKKIRSA 548 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 L + +VG K V ++ R EEV+ + Sbjct: 549 QLSQYNYIFVVGEKESESRTVSVRSRGGKQLGRRPTEEVLTSLTQLRDAR 598 >gi|254579094|ref|XP_002495533.1| ZYRO0B13596p [Zygosaccharomyces rouxii] gi|238938423|emb|CAR26600.1| ZYRO0B13596p [Zygosaccharomyces rouxii] Length = 454 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 78/451 (17%), Positives = 158/451 (35%), Gaps = 49/451 (10%) Query: 16 RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIR-EEQNRTGAIEMSVPT 73 E+++ + + I S G +LP G K + + ++ ++Q + G E+ P Sbjct: 33 ASHEVSNRQKL----FITDPISPGSIFFLPNGTKIFNKLIQFMKLQQQFKYGFKEVVTPL 88 Query: 74 LQSADLWVESGRYDSYGKEMLRLA--DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 + LW +SG +D+Y ++M R+ D + + P + +F+ +SY LP Sbjct: 89 IYRKSLWEQSGHWDNYKEDMFRVEGHDTSKEEYGLKPMNCPGHCMVFKRFDRSYSELPLR 148 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 R+E G+ R R+F D + F TP+ + K + ++ Sbjct: 149 LSDFSPLHRNEASGALSGLTRVRKFHQDDGHIFC-TPDQVESEIAKCLKLVDMCYTKVFP 207 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 S + E + E D+ + + E Sbjct: 208 LSPELANEVYTLELSTRPE----------HFIGDVKVWDYAETVLKNILNKFGKPWELNE 257 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 A Y D+ K+ D + +V+ ++ F ++ +K D Sbjct: 258 ADGAFYGPKIDI---KVTDHTGKYHQVATIQLD----FQLPERFD----LKYKDRDNTYK 306 Query: 311 YV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + G++ A++ D WP + P + +I + Q DAC+ ++ Sbjct: 307 RPIMIHRAVFGSVERFMAILI---DSNHGKWPFWLNPRQAMIIPVNTKRQGQVDACKDLF 363 Query: 370 ARLSKVG--------------CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSK 415 +L G + D+ E +G + A + + +I+G K V + Sbjct: 364 LKLRGQGNENSTDPIPLNSFHFNADLDERPEPVGYRIKDALMKNYSYLIIIGDKEVETGR 423 Query: 416 VEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 I+ R E ++ +E+ N + + Sbjct: 424 YAIRTREDRQLEHLTDDEIFNKFRELEKHYK 454 >gi|15790739|ref|NP_280563.1| threonyl-tRNA synthetase [Halobacterium sp. NRC-1] gi|10581281|gb|AAG20043.1| threonyl-tRNA synthetase [Halobacterium sp. NRC-1] Length = 650 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 76/446 (17%), Positives = 138/446 (30%), Gaps = 46/446 (10%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNR 63 +Y + RD ++ L + I G+ + P G+ L ++ +R + Sbjct: 240 EYLARREEAKERDHRKLGREMDLFS--IPDVTGPGLPLYHPNGKTVLRELSEYVRGLNSE 297 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L +LW +SG YD+Y +M L D ND+ P + IF Sbjct: 298 MGYDEVETPHLFRTELWKQSGHYDNYVDDMF-LLDVNDEEYGLKPMNCPGHATIFNEGSW 356 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP +++ +R E R G+ R F + D + F + Sbjct: 357 SYRDLPVRYFEDGKVYRKEQRGELSGLSRVWAFTIDDGHVFARADQIEAEV--------- 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 R + +I ++ + ++ V T + S D + D Sbjct: 408 ----RRLMDTITEVLDTFDL------DYEVALATRPEKSVGSDDIWEQSERQLREVLDQQ 457 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y D E D+L + ++ F ++ + Sbjct: 458 GVDYDVEPGDGAFYGPKIDFGFE---DALGRSWDGPTVQLD----FNMPDRFD----LEY 506 Query: 303 KGADGKDHYV-QMGSYGIGAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G+D H + G+ R +IE + Sbjct: 507 TGSDNDAHQPVMIHRALYGSYERFFMVLIEHYNGRFPTWLAPEQVRILPVT-------DD 559 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ++ L V +D +G + A P ++VG V ++ Sbjct: 560 NLGYAHRVKNELGD--YRVEVEDRDWTVGKKIQQAHDDNVPYMLVVGDDEEDADAVSVRD 617 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R + + L E + R Sbjct: 618 RQEREGKGVDLAEFRAHLDSEVDGKR 643 >gi|15902287|ref|NP_357837.1| prolyl-tRNA synthetase [Streptococcus pneumoniae R6] gi|116515963|ref|YP_815764.1| prolyl-tRNA synthetase [Streptococcus pneumoniae D39] gi|81845175|sp|Q8DRB0|SYP_STRR6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|122279350|sp|Q04MI4|SYP_STRP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|15457791|gb|AAK99047.1| Prolyl-tRNA synthetase [Streptococcus pneumoniae R6] gi|116076539|gb|ABJ54259.1| prolyl-tRNA synthetase [Streptococcus pneumoniae D39] Length = 617 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 106/257 (41%), Positives = 146/257 (56%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWVVLDKSVVSFDEIPVEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L IV Sbjct: 241 QEEIKAELLKWIVSGED 257 Score = 142 bits (359), Expect = 8e-32, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + V+ + + Sbjct: 593 IKATGDTIEVHADNVLETL--EILSKK 617 >gi|169236481|ref|YP_001689681.1| threonyl-tRNA synthetase [Halobacterium salinarum R1] gi|73921305|sp|Q9HP27|SYT_HALSA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|229470722|sp|B0R6G6|SYT_HALS3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|167727547|emb|CAP14335.1| threonine--tRNA ligase [Halobacterium salinarum R1] Length = 640 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 76/446 (17%), Positives = 138/446 (30%), Gaps = 46/446 (10%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNR 63 +Y + RD ++ L + I G+ + P G+ L ++ +R + Sbjct: 230 EYLARREEAKERDHRKLGREMDLFS--IPDVTGPGLPLYHPNGKTVLRELSEYVRGLNSE 287 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L +LW +SG YD+Y +M L D ND+ P + IF Sbjct: 288 MGYDEVETPHLFRTELWKQSGHYDNYVDDMF-LLDVNDEEYGLKPMNCPGHATIFNEGSW 346 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP +++ +R E R G+ R F + D + F + Sbjct: 347 SYRDLPVRYFEDGKVYRKEQRGELSGLSRVWAFTIDDGHVFARADQIEAEV--------- 397 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 R + +I ++ + ++ V T + S D + D Sbjct: 398 ----RRLMDTITEVLDTFDL------DYEVALATRPEKSVGSDDIWEQSERQLREVLDQQ 447 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + A Y D E D+L + ++ F ++ + Sbjct: 448 GVDYDVEPGDGAFYGPKIDFGFE---DALGRSWDGPTVQLD----FNMPDRFD----LEY 496 Query: 303 KGADGKDHYV-QMGSYGIGAM-RVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G+D H + G+ R +IE + Sbjct: 497 TGSDNDAHQPVMIHRALYGSYERFFMVLIEHYNGRFPTWLAPEQVRILPVT-------DD 549 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ++ L V +D +G + A P ++VG V ++ Sbjct: 550 NLGYAHRVKNELGD--YRVEVEDRDWTVGKKIQQAHDDNVPYMLVVGDDEEDADAVSVRD 607 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R + + L E + R Sbjct: 608 RQEREGKGVDLAEFRAHLDSEVDGKR 633 >gi|82753545|ref|XP_727721.1| threonyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL] gi|23483702|gb|EAA19286.1| threonyl-tRNA synthetase, putative [Plasmodium yoelii yoelii] Length = 930 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 80/483 (16%), Positives = 144/483 (29%), Gaps = 72/483 (14%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 + Y I + RD L L + S G W G K + + +R+E Sbjct: 463 LTDYIKFIEEAKKRDHRNVGKNLNLF-FFEKETSPGSGFWFSHGAKIYNKLIEFMRKEYR 521 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + S DLW SG Y +Y M + + +K P + IF+ Sbjct: 522 IRKYDEVITPNIFSCDLWKTSGHYQNYKNCMF-IFNIENKEWGMKPMNCPGHCLIFKQLN 580 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++LP + R+E+ G+ R R F DA+ F + Sbjct: 581 ASYKSLPIRLADFGVLHRNEITGSLSGLTRVRRFQQDDAHIFCSLDHIKTE-VVNVLQFI 639 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +++ G K + + P E DF S + Sbjct: 640 FFVYNLFGFKY-DLYLSTRPPKYIGDIE-----------------TWDFAEKSLKEALEL 681 Query: 242 IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTKYSLPMS 299 + E A Y D+ L DSL + + ++ F K Sbjct: 682 ANVKWKLNEGDGAFYGPKIDI---VLRDSLNRSHQCGTVQLDFQLPIRFNLQYKNKEYGV 738 Query: 300 ATFKG--------------------------------------ADGKDHYVQMGSYGIGA 321 G D + + +G+ Sbjct: 739 GQETDSNLVNNSNTDVIEKKEDSTLENIDNNQDPINNQPGGVLKKGFDRPIIIHRAILGS 798 Query: 322 MRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFW 381 + A++ GK W + + + + I+ L+ DV Sbjct: 799 VERFVAILVEHTSGKFPFWLSPRQAIVLPI------SDKFNEYAKYIHTVLTNNLFDVDV 852 Query: 382 DDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT-GIREDMSLEEVINYASH 440 D + + A L + ++VG K +S + V ++ R ++ +++E++N Sbjct: 853 DISVNTLNKKIREAQLKQYNFILVVGEKEISTNTVTVRDRDNPNDQKVYTVQELVNTFKK 912 Query: 441 RFS 443 Sbjct: 913 MLD 915 >gi|313898260|ref|ZP_07831797.1| proline--tRNA ligase [Clostridium sp. HGF2] gi|312956642|gb|EFR38273.1| proline--tRNA ligase [Clostridium sp. HGF2] Length = 564 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 98/243 (40%), Positives = 144/243 (59%), Gaps = 1/243 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK + L+EN +D + S L++R GMI + S GIY +P+G++ L + I+REE Sbjct: 1 MKLSKSYFYTLRENVKDEDSTSGNLLVRAGMIKKSSSGIYMIMPMGKRVLKKIEEIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P + +++ +SGR +++G M L DR K + GPTHEE+ T Sbjct: 61 MDAAGAQELLMPAMIPEEIYEKSGRREAFGSNMFALKDRYQKNYVLGPTHEELFTMAAMM 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++ P+ YQIQ KFRDE RPR+G++R REF+MKDAYSFD+ G + SY KMF + Sbjct: 121 KGSSYKDFPYNLYQIQTKFRDETRPRYGLIRVREFIMKDAYSFDIDEAGLQESYMKMFQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y I R L ++A++G +GG LS EF + + GE V + DF E T+ Sbjct: 181 YKNIMDRCNLNYKIVKADTGAMGGSLSEEFQAITEIGEDVVVTCEGC-DFSSNLEITEVI 239 Query: 241 DII 243 D Sbjct: 240 DTG 242 Score = 163 bits (413), Expect = 5e-38, Method: Composition-based stats. Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 5/229 (2%) Query: 218 ETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN--K 275 E + ++ + + D N ++ +T +D+ D P+ Sbjct: 339 ECPIIMDREVANMKNFIVGANKTDHHIKNVNLKDFTV--ETVADIAQVHEGDICPKCGKP 396 Query: 276 RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDG 335 +GIEVG+ F GTKY+ + ++ + K H V+MG YG G R +AA++E +D Sbjct: 397 LKFCKGIEVGNTFKLGTKYAKALGLEYQDVNNKLHPVEMGCYGFGLERCMAAIVEQHNDA 456 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 GIIWP SVAPF+++++ + + D ++Y L K G DV DD E+ G +F Sbjct: 457 SGIIWPTSVAPFEVAVVVVSSKDDEQMRIGNELYEALKKEGIDVLLDDRKERPGVKFKDM 516 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +L+G P ++ VG + + D VE + R D+SL E+++ Sbjct: 517 ELIGIPYRITVG-RGIKDGNVEFRARTADESSDVSLHEIVDMVKKELQK 564 >gi|68468847|ref|XP_721482.1| hypothetical protein CaO19.2984 [Candida albicans SC5314] gi|68469391|ref|XP_721210.1| hypothetical protein CaO19.10501 [Candida albicans SC5314] gi|46443119|gb|EAL02403.1| hypothetical protein CaO19.10501 [Candida albicans SC5314] gi|46443402|gb|EAL02684.1| hypothetical protein CaO19.2984 [Candida albicans SC5314] Length = 455 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 75/461 (16%), Positives = 153/461 (33%), Gaps = 67/461 (14%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 + I+S +L+ T S G +LP G + L+ + ++ +Q + G E+ P + Sbjct: 32 SNHVISSKQLLYTT---DPTSPGSIFFLPHGTRILNKLIQFMKNQQTKYGFQEVVTPLIF 88 Query: 76 SADLWVESGRYDSYGKEMLR-----------LADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 LW +SG +D+Y +M + + + P + IF +S Sbjct: 89 KTKLWKKSGHWDNYKDDMFKVVGNDITKEEYTDNIEEHEYGLKPMNCPSHCMIFAKFDRS 148 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 Y+ LP + R+E G+ R R F D + F + Sbjct: 149 YQELPVRYSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCSMDQIDGE-IKNTLELIKD 207 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ G+ I + P E + + D + Sbjct: 208 TYNVFGINEIEFYLSTRP----------------EDKFIGEIETWDIAESQLKNVLNSTA 251 Query: 244 SLNSIV--EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 + E A Y DV L D+ + +V ++ F ++ Sbjct: 252 GEGNWATREGDGAFYGPKIDVL---LKDAFNKKHQVGTIQLD----FQLPNRF----ELK 300 Query: 302 FKGADG--KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G DG + + G++ A++ D WP + P + ++ I + Sbjct: 301 YVGEDGKRDHQPILVHRAVFGSLERFFAILL---DHYQGKWPFWINPRQALIVPIN---E 354 Query: 360 VCRDACEKIYARLSKV--------------GCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405 E++ +LS V D GE +G++ A G+ ++ Sbjct: 355 SHVPVAEELQKKLSGNIVSCDNAIAPLTGFNFHVDIDKRGETVGARTKDAIQKGYSYLIM 414 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 +G K +++ ++ R ++M+ +E+ + + Sbjct: 415 IGDKDIANGTFAVRSRDDRKIKNMTSDEIYKMFIALEQSYK 455 >gi|182683244|ref|YP_001834991.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CGSP14] gi|303259373|ref|ZP_07345350.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293] gi|303261128|ref|ZP_07347077.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292] gi|303263456|ref|ZP_07349379.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS397] gi|303265748|ref|ZP_07351646.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS457] gi|303267821|ref|ZP_07353623.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS458] gi|226701345|sp|B2ISI9|SYP_STRPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|182628578|gb|ACB89526.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CGSP14] gi|302637965|gb|EFL68451.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292] gi|302639307|gb|EFL69765.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293] gi|302642517|gb|EFL72862.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS458] gi|302644656|gb|EFL74905.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS457] gi|302647229|gb|EFL77453.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS397] Length = 617 Score = 197 bits (500), Expect = 4e-48, Method: Composition-based stats. Identities = 105/257 (40%), Positives = 147/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADT----GETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ + V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTALDRWVVLDKSVVSFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L IV Sbjct: 241 QEEIKAELLKWIVSGED 257 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-ATDGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + V+ + + Sbjct: 593 IKATGDTIEVHADNVLETL--EILSKK 617 >gi|312218414|emb|CBX98360.1| similar to threonyl-tRNA synthetase [Leptosphaeria maculans] Length = 784 Score = 197 bits (500), Expect = 4e-48, Method: Composition-based stats. Identities = 75/492 (15%), Positives = 139/492 (28%), Gaps = 76/492 (15%) Query: 5 KYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 + L L+E RD L H+ S G +LP GQ + + A +REE Sbjct: 314 QAHLKFLEEAAKRDHRKIGKDQELF--FFHEFSPGSCFFLPHGQIIYNTLQAFLREEYWN 371 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P + ++ LW SG + Y +M D + P + IF+ + Sbjct: 372 RGYQEVGSPNMYNSALWKISGHWQHYADDMFTF-DVEKEKWALKPMNCPGHCLIFKHRER 430 Query: 124 SYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 SYR LP + R+E + +D T + +F Sbjct: 431 SYRELPIRMADFGILHRNEASGALTGLTRVRRFQQDDTHVFCTQDQINEEILALFDFLKA 490 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ + G ++ + P G + A+ + + Sbjct: 491 VYGKFGFTFK-LKLSTRPEGFLGDIDTWNQAEAKL-------------TQALDEFTAGGG 536 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTKYSLPMSAT 301 + A Y D+ + D+L + + ++ F S + Sbjct: 537 GAWELNPGDGAFYGPKIDI---TISDALKREFQCATIQLDFQLPNQFELEYMTSEGAATK 593 Query: 302 FKGA-------------------------------------------DGKDHYVQMGSYG 318 K G V + Sbjct: 594 PKEEKVKAEQQKVEKKAEQPKEKDHIDQKKDNLGGQVAIPKEIRPPQPGYARPVMIHRAI 653 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 G+ A++ G+ W I ++ D +++ A L K Sbjct: 654 YGSFERFIAILTEHFAGRWPFWLSPRQVMVIPVMP------SANDYVKEVQAELRKHHLH 707 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIR----EDMSLEEV 434 D G + + A L + ++VG++ V ++R E + L+E Sbjct: 708 ADIDISGNTMQKKIRTAQLSLYNFIMVVGAEEQKARAVNWRNRDDQETQQRGEIVPLDEA 767 Query: 435 INYASHRFSNNR 446 + R Sbjct: 768 VKKLVQLRDERR 779 >gi|260757797|ref|ZP_05870145.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] gi|260668115|gb|EEX55055.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] Length = 232 Score = 197 bits (500), Expect = 4e-48, Method: Composition-based stats. Identities = 111/231 (48%), Positives = 156/231 (67%) Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 ++LA+TGE+QV+C + ++D +P +TDF + L IV +WT PYAAT ++H+E + Sbjct: 1 MILAETGESQVYCDRAYLDLAVPGADTDFRNDAQLTDIVTRWTTPYAATDEMHDEADWAK 60 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 + +VSARGIEVGHIF+FGTKYS PM A +G DGK+H V MGSYGIG R+VAA IE Sbjct: 61 VKPESQVSARGIEVGHIFHFGTKYSEPMGAKVQGPDGKEHLVSMGSYGIGPSRLVAAAIE 120 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 +SHD GIIWP ++APF ++N+K D+ C EK+Y L+ G D DD E+ G+ Sbjct: 121 ASHDDAGIIWPKTIAPFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDERPGA 180 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 +FA DL+G P QVIVG + V+ +VE+K R TG R+ + ++ IN + + Sbjct: 181 KFATMDLIGLPTQVIVGPRGVAAGEVEVKDRKTGERQSLGIKAAINMLTAQ 231 >gi|313681998|ref|YP_004059736.1| prolyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994] gi|313154858|gb|ADR33536.1| prolyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994] Length = 567 Score = 197 bits (500), Expect = 4e-48, Method: Composition-based stats. Identities = 100/228 (43%), Positives = 142/228 (62%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++P +E P+DA++ SH + R G + Q + G+Y++LP+G++ L + II EE Sbjct: 1 MRFSKAYIPTTKEAPKDAQLPSHIYLSRAGFVTQVAAGLYNFLPMGKRVLRKIETIINEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 A E+ + + A+LW ESGR + +GKE+LR DR D + GPTHEE+M +I R+ Sbjct: 61 MAACDAQEVDLSFVTPAELWEESGRIEKFGKELLRFRDRKDNLFVLGPTHEEMMVNIVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQI+ KFRDE RPRFG+MR REF+MKD YSF + E ++ M + Sbjct: 121 RVTSYKQLPLNLYQIKTKFRDEARPRFGLMRGREFVMKDGYSFHSSNEDLDREFDAMEAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFM 228 Y RI RLGL+ + A+SG IGG S E +VLA +GE + Sbjct: 181 YKRILERLGLEFRIVEADSGAIGGTGSKELMVLAGSGEDTLAICDSCE 228 Score = 157 bits (398), Expect = 3e-36, Method: Composition-based stats. Identities = 65/187 (34%), Positives = 100/187 (53%), Gaps = 3/187 (1%) Query: 257 AATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A +D+ + + D P K + +GIEVGHIF GT YS P+ A F +G+ M Sbjct: 380 AHFADLVSVQEGDGCPHCGGKILHTKGIEVGHIFKLGTVYSAPLKAEFLDENGRSQPFIM 439 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G+YG+G R+VAAVIE HD KG IW + AP+ ++++ ++ E++YA L Sbjct: 440 GTYGMGVSRLVAAVIEQHHDEKGCIWTHATAPYLVNVMVSNIKEESHMAYAEELYASLQS 499 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G + DD E+ G + + A+L+GFP VIVG K + + V+I R T + +V Sbjct: 500 RGIETMLDDRKERFGFKMSDAELIGFPYTVIVG-KELENGSVQIMVRATREMITVDAADV 558 Query: 435 INYASHR 441 ++ Sbjct: 559 LSKIEEL 565 >gi|119025474|ref|YP_909319.1| prolyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703] gi|152112217|sp|A1A0K4|SYP_BIFAA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|118765058|dbj|BAF39237.1| prolyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703] Length = 605 Score = 197 bits (500), Expect = 4e-48, Method: Composition-based stats. Identities = 103/283 (36%), Positives = 153/283 (54%), Gaps = 2/283 (0%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S FL L+E+P DA++ S KL+ R + + + GI++WLPLG L+ + IIREE Sbjct: 1 MSTMFLRTLREDPADADVVSDKLLQRACYLRKAAPGIWTWLPLGLNVLNKIENIIREEMA 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 A E+ L + + + R++ YG + RL DR++ + PTHEE+ T + + Sbjct: 61 SIDAQEVHFSGLLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDLY 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++LP T YQIQ K+RDE RPR G++R REF+MKDAYSF L EG +Y +Y Sbjct: 121 SSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTLDKEGLVKAYMDERGAYE 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 RIF+RL LK +P+ A +GP+GG S EF+ + GE S + + + T + Sbjct: 181 RIFNRLDLKYVPVHAMAGPMGGFESEEFLAPMEIGEDTFAQSPSGKAWNVEALTTPEPEA 240 Query: 243 I--SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 I + E+ P AAT D E + P + + + Sbjct: 241 IDFTATPAAEKRPTPDAATIDKMVEFANANHPRSDGRDWQASD 283 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 4/189 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D P+ RG+E+G +F G KYS + +GK V MG Sbjct: 414 GTVEAVQVRHGDMSPDGSGPLSFERGVEIGQVFQLGLKYSNALGLKVLDQNGKTVPVWMG 473 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYGIG RV+A + E+ HD KG+ W +V + D +A E++ L Sbjct: 474 SYGIGVSRVMACIAETHHDEKGLAW-PAVIAPAQVHVVATGKDAAAFEAAEQLIGELEAK 532 Query: 376 GCDVFWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V +DD + G +F A+L+G P+ + G V++ +E++ R E + + + Sbjct: 533 GIEVIFDDRKKVSPGVKFKDAELIGVPIIAVAGRDTVNNGTIEVRDRNGENAEAVPVADA 592 Query: 435 INYASHRFS 443 + R + Sbjct: 593 AQAIADRVA 601 >gi|326936120|ref|XP_003214106.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial-like, partial [Meleagris gallopavo] Length = 550 Score = 197 bits (500), Expect = 4e-48, Method: Composition-based stats. Identities = 79/434 (18%), Positives = 129/434 (29%), Gaps = 61/434 (14%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 RD + L H S G +LP G + + IR E G E+ P + Sbjct: 170 RDHRRIGKEQELF--FFHALSPGSCFFLPRGAHIYNTLIDFIRSEYQARGFSEVVTPNIF 227 Query: 76 SADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQI 135 S LW SG + Y M + + P + +F +S+R LP Sbjct: 228 SPRLWELSGHWQHYSAHMFSFTAGTET-LSLKPMNCPAHCLMFAHRPRSWRELPLRLADF 286 Query: 136 QLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIP 194 + R+E G+ R R F DA+ F + I+ LG Sbjct: 287 GVLHRNEPPGSLTGLTRVRRFQQDDAHIFCALEQLEAE-IGACLDFVRSIYATLGFSFQM 345 Query: 195 MRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTA 254 A T D D + + A Sbjct: 346 ALA------------------TRPDGFLGDAATWDRAEQQLEKSLQDFGEPWELSQGDGA 387 Query: 255 PYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 Y D+ + D+L + + ++ FG +Y+ A G V + Sbjct: 388 FYGPKIDIR---IQDALGRHHQCGTIQLDFQMPERFGLEYA-------SAAGGTARPVLI 437 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 +G++ + AV+ S GK ++A L + Sbjct: 438 HRAVLGSVERMVAVMAESCGGKWGT---------------------------SVHAMLRR 470 Query: 375 VGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 G D D G +G + A L + Q++VG + V ++ R + SL + Sbjct: 471 DGVMADLDADAGATLGRKIRRAQLTHYNFQLVVGRREQEHGTVSVRTRDNRQLGEHSLGQ 530 Query: 434 VINYASHRFSNNRP 447 V+ P Sbjct: 531 VLQRLRELRDARVP 544 >gi|195125579|ref|XP_002007255.1| GI12837 [Drosophila mojavensis] gi|193918864|gb|EDW17731.1| GI12837 [Drosophila mojavensis] Length = 460 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 142/469 (30%), Positives = 224/469 (47%), Gaps = 52/469 (11%) Query: 2 RRSKYFLPILQENPRDAEI-------ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVN 54 + S+ F P L P++A + S KL+ G++ S G Y +P+ Q+ALD Sbjct: 3 KASRLFCPALI-IPKNAVVKQTEQLSVSQKLLTELGLVKSGSNGTYQIMPIAQRALDKCI 61 Query: 55 AIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM 114 +++ G ++S+P L LW ++GR D E + DR+ K + PTHEE + Sbjct: 62 NLVQRNMQEAGGQKISLPVLTPTQLWKKTGRLDGDISEFYMVRDRSGKQFLMSPTHEEAI 121 Query: 115 T-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 T + + SYR LP YQI KFRDEL+ RFG+MR++EFLMKD Y+FD++ E ++ + Sbjct: 122 TAMLATTAPISYRQLPLLLYQIGPKFRDELKSRFGLMRAKEFLMKDMYTFDVSKEKAELT 181 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y + +Y R F +L + + + A +G +GG LSHE+ ++ GE + Sbjct: 182 YATVSEAYERFFRQLEVPFVKVEAATGIMGGSLSHEYHYISPVGEDTLLNCSSC------ 235 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN---KRVSARGIEVGHIFYF 290 YA ++V E + P + RG+EV H F Sbjct: 236 ---------------------GYAGNAEVFGEDATSTCPNCQSTQLNRVRGVEVAHTFLL 274 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 G KYS P+ AT+ GK + MG YGIG R++AA +E + WP +AP+ + Sbjct: 275 GDKYSKPLGATYLNTSGKPETLVMGCYGIGITRIIAAALEVLSTEHELRWPTLLAPYDVC 334 Query: 351 LINIKAHDQVCRDACEKIYARLSKV-----GCDVFW-DDMGE-QIGSQFAVADLLGFPLQ 403 LI K + E+I + L + G + DD E IG + A LG PL Sbjct: 335 LIGPKQGSKEQVS-GERIESDLLQQLTQVCGAEQLLHDDRKELTIGKRLMEAKRLGHPLT 393 Query: 404 VIVGSKFV--SDSKVEIKHRLTG-IREDMSLEEVINYASHRFSNNRPVL 449 V+VG+K K+E+ +G ++++ EV+ + + + +L Sbjct: 394 VVVGAKATQGEAPKLEL--HASGAETVELNITEVLERVASHVRHKQQLL 440 >gi|322709352|gb|EFZ00928.1| threonyl-tRNA synthetase, putative [Metarhizium anisopliae ARSEF 23] Length = 759 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 78/500 (15%), Positives = 158/500 (31%), Gaps = 86/500 (17%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ ++ + + RD ++ L S G +LP G + + + ++RE+ Sbjct: 287 MK--EWLTYLEEAKKRDHQLIGKNQKLFW--FSPLSPGSPFFLPHGTRIFNAIQTMLREQ 342 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRL------------------------ 96 G E+ P + LW SG +D Y ++M R+ Sbjct: 343 YWMRGYDEVHSPLMYDVQLWKTSGHWDHYQEDMFRVPLKHTHGAAPDAPVASGPDAAKDA 402 Query: 97 --------------ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDE 142 ++ P + +F S +SYR+LP+ + R+E Sbjct: 403 DKPAGKDGENAEVAKLEQERLFALKPMNCPGHALMFASEERSYRSLPWRVADFSVLHRNE 462 Query: 143 LRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGP 201 G+ R R+F DA+ F + + + ++ + + ++ + P Sbjct: 463 ASGALTGLTRVRKFQQDDAHIFCTIDQVTDE--LRGLFKFMTHVYTMFGFPFKLKLSTRP 520 Query: 202 IGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV-EQWTAPYAATS 260 D + + ++ A Y Sbjct: 521 -----------------DSYMGKLSDWDAAEDRLKKALQEFKGDDWVINPGDGAFYGPKI 563 Query: 261 DVHNEKLFDSLPENKRVSARGIEVGHIFYFG----TKYSLPMSATFKG------ADGKDH 310 DV + D+L + + ++ F T S A +G G Sbjct: 564 DV---TVNDALGREFQCATIQLDFQLPQNFNLLYRTNESTADRAKGEGEEEGGIPSGMAR 620 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 V + IG+ +I + G WP ++P ++ +I I + D ++ Sbjct: 621 PVMIHRAVIGSFDRFMGIII---EHFGGKWPFWLSPRQVMVIPIMKDAE---DYAREVRD 674 Query: 371 RLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE--- 427 L D G + + A L + ++VG++ + V I++R + Sbjct: 675 ILHDAKLYADVDVSGNTLQKKIRAAQLAQYNFVMVVGAEEIEKRAVNIRNRDDPSSQQKG 734 Query: 428 -DMSLEEVINYASHRFSNNR 446 + L+EV+ + R Sbjct: 735 AMIDLDEVVKRLVELKAERR 754 >gi|327488783|gb|EGF20582.1| proline--tRNA ligase [Streptococcus sanguinis SK1058] Length = 616 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 138/212 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKRIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDAAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 Y +IF R L + + G +GG S EF+ Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMA 212 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 16/200 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M+A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLKFARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPM 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEFRYAWGINFPKELAPFDVHLIPVNIKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +I A L G +V DD E+ G +F+ +DL+G P++V VG K ++ VE+K Sbjct: 534 EALALTNQIEANLLSAGYEVLVDDRNERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYAS 439 + TG ++ + ++ S Sbjct: 593 IKATGDTIEVHADNLLETLS 612 >gi|288924947|ref|ZP_06418883.1| threonine--tRNA ligase [Prevotella buccae D17] gi|288338137|gb|EFC76487.1| threonine--tRNA ligase [Prevotella buccae D17] Length = 673 Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats. Identities = 76/425 (17%), Positives = 144/425 (33%), Gaps = 38/425 (8%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + + RD ++ L + KG+ WLP G + + ++R Sbjct: 232 EYLVMLEEAKKRDHRKIGKEMELFM-FSERVGKGLPIWLPKGTELRLRLQELLRSMLRPY 290 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHI 122 E+ P + L+V SG Y YGK+ + D+ + P + ++F Sbjct: 291 NYQEVITPGIGGKSLYVTSGHYAHYGKDAFQPIHTPEEDEEYMLKPMNCPHHCEVFARKP 350 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SY++LP + FR E G+ R R F DA+ F P+ K + Sbjct: 351 RSYKDLPLRIAEFGTVFRYEKSGELHGLTRVRTFTQDDAHIFVR-PDQVKAEFETNIDII 409 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 L++F+ G + + D + + + D + + + Sbjct: 410 LKVFNIFGFDNYEAQISLR--------------DPNDKEKYIGSDEVWEESETAIKEACA 455 Query: 242 IISLNSIVE-QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 L + VE A Y D + D++ ++ ++ F Sbjct: 456 EKGLKARVELGEAAFYGPKLDFM---VKDAIGRRWQLGTIQVDYNLPNRF--------KL 504 Query: 301 TFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + D + G++ AV+ G +W + I + Sbjct: 505 EYTAEDNSKKTPVMIHRAPFGSLERFTAVLIEHTAGHFPLW------LTPDQVAILPISE 558 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 D + + VG D+ E+IG + +L P VIVG K ++ V ++ Sbjct: 559 KYNDYAKSVARYFDSVGVRAIIDERNEKIGRKIRDNELKRVPYMVIVGEKESAEGLVSMR 618 Query: 420 HRLTG 424 + G Sbjct: 619 KQGGG 623 >gi|56808720|ref|ZP_00366440.1| COG0442: Prolyl-tRNA synthetase [Streptococcus pyogenes M49 591] gi|94995163|ref|YP_603261.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10750] gi|209560100|ref|YP_002286572.1| prolyl-tRNA synthetase [Streptococcus pyogenes NZ131] gi|114152263|sp|Q1J4L9|SYP_STRPF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701346|sp|B5XIL5|SYP_STRPZ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|94548671|gb|ABF38717.1| Prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10750] gi|209541301|gb|ACI61877.1| Prolyl-tRNA synthetase [Streptococcus pyogenes NZ131] Length = 618 Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats. Identities = 109/307 (35%), Positives = 159/307 (51%), Gaps = 19/307 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQSKLLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R++ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHHNYEDLDVTYEDYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA------DTGETQVFCSKDFMDFPIPS 234 Y IF R GL + + G +GG S EF+ + D D P Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAITPARTDLDRWVVLDKSIASMDDIPKEV 240 Query: 235 ENTDFDDIISLNSIVEQWTAP-----YAATSDVHN--------EKLFDSLPENKRVSARG 281 ++ + E A YAA ++ D+L E + + Sbjct: 241 LEEIKAELAAWMISGEDTIAYSTESSYAANLEMATNEYKPSSKVAAEDALAEVETPHCKT 300 Query: 282 IEVGHIF 288 I+ F Sbjct: 301 IDEVAAF 307 Score = 142 bits (359), Expect = 8e-32, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 104/199 (52%), Gaps = 16/199 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ V RGIEVGHIF GT+YS M AT +G+ + Sbjct: 414 FQAEYVDIREVKEGEMSPDGHGVLQFARGIEVGHIFKLGTRYSDSMGATILDENGRTVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P +APF + LI + DQ Sbjct: 474 VMGCYGIGVSRILSAVIEQHARLFVNKTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQ 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 V +D K+ A L G DV DD E++GS+F+ +DL+G P++V VG K ++ VEIK Sbjct: 534 VAQDLTAKLEADLMAKGYDVLTDDRNERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIK 592 Query: 420 HRLTGIREDMSLEEVINYA 438 + TG +++ E +I Sbjct: 593 IKATGDSIEVNAENLIETL 611 >gi|328754594|gb|EGF68210.1| threonyl-tRNA synthetase [Propionibacterium acnes HL025PA2] Length = 689 Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats. Identities = 66/448 (14%), Positives = 129/448 (28%), Gaps = 45/448 (10%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + ++E R D +L L + + G+ + P G + + G Sbjct: 250 YQQRIKEAERRDHRKLGAELDLFS-FPEEIGPGLVVFHPKGAMLRHLIEEHVIARHMEAG 308 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHEEV 113 + P + L+ SG Y M R + + + Sbjct: 309 FNFVHTPEITKGGLFHTSGHLPYYADTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPM 368 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IFRS +SYR LP F+++ +R E G+ R R F D++++ + Sbjct: 369 HNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGE 428 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 K +L I GL + + +FI + Sbjct: 429 -IKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDED-----------WQVAT 476 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y + ++ D++ ++S + Sbjct: 477 DTLDQVCRSTGLQLVPDPGGAAFYGPKV---SVQVRDAIGRTWQMSTIQYDFNQP----- 528 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + ADG + S +G++ V+ + G +W Sbjct: 529 ---ERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW------LSPVQ 579 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + + + D L G V D ++ G + A P +I G + Sbjct: 580 VRLVPVAEAFNDYVTGFAEVLGSRGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDA 639 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYAS 439 V + R + L+E + + Sbjct: 640 EAGAVSFRLRDGSQVNGVVLDEAVRIIA 667 >gi|315098581|gb|EFT70557.1| threonyl-tRNA synthetase [Propionibacterium acnes HL059PA2] Length = 689 Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats. Identities = 66/448 (14%), Positives = 129/448 (28%), Gaps = 45/448 (10%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + ++E R D +L L + + G+ + P G + + G Sbjct: 250 YQQRIKEAERRDHRKLGAELDLFS-FPEEIGPGLVVFHPKGAMLRHLIEEHVIARHMEAG 308 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHEEV 113 + P + L+ SG Y M R + + + Sbjct: 309 FNFVHTPEITKGGLFHTSGHLPYYADTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPM 368 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IFRS +SYR LP F+++ +R E G+ R R F D++++ + Sbjct: 369 HNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGE 428 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 K +L I GL + + +FI + Sbjct: 429 -IKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDED-----------WQVAT 476 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y + ++ D++ ++S + Sbjct: 477 DTLDQVCRSTGLQLVPDPGGAAFYGPKV---SVQVRDAIGRTWQMSTIQYDFNQP----- 528 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + ADG + S +G++ V+ + G +W Sbjct: 529 ---ERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW------LSPVQ 579 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + + + D L G V D ++ G + A P +I G + Sbjct: 580 VRLVPVAEAFNDYVTGFAEVLGSRGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDA 639 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYAS 439 V + R + L+E + + Sbjct: 640 EAGAVSFRLRDGSQVNGVVLDEAVRIIA 667 >gi|94991250|ref|YP_599350.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10270] gi|114152262|sp|Q1JEV3|SYP_STRPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|94544758|gb|ABF34806.1| Prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10270] Length = 618 Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats. Identities = 109/307 (35%), Positives = 159/307 (51%), Gaps = 19/307 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQSKLLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R++ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHHNYEDLDVTYEDYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y IF R GL + + G +GG S EF+ D V IP E Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAITPARTDLDRWVVLDKSIASMDAIPKEV 240 Query: 237 TDFDDIISLNSIVEQWT-------APYAATSDVHN--------EKLFDSLPENKRVSARG 281 + ++ + YAA ++ D+L E + + Sbjct: 241 LEEIKAELAAWMISGEDTIAYSTESSYAANLEMATNEYKPSSKVAAEDALAEVETPHCKT 300 Query: 282 IEVGHIF 288 I+ F Sbjct: 301 IDEVAAF 307 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 103/199 (51%), Gaps = 16/199 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ V RGIEVGHIF GT+YS M AT + + + Sbjct: 414 FQAEYVDIREVKEGEISPDGHGVLQFARGIEVGHIFKLGTRYSDSMGATILDENSRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P +APF + LI + DQ Sbjct: 474 VMGCYGIGVSRILSAVIEQHARLFVNKTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQ 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 V +D K+ A L G DV DD E++GS+F+ +DL+G P++V VG K ++ VEIK Sbjct: 534 VAQDLTAKLEADLMAKGYDVLTDDRNERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIK 592 Query: 420 HRLTGIREDMSLEEVINYA 438 + TG +++ E +I Sbjct: 593 IKATGDSIEVNAENLIETL 611 >gi|314967879|gb|EFT11978.1| threonyl-tRNA synthetase [Propionibacterium acnes HL037PA1] Length = 689 Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats. Identities = 66/448 (14%), Positives = 129/448 (28%), Gaps = 45/448 (10%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + ++E R D +L L + + G+ + P G + + G Sbjct: 250 YQQRIKEAERRDHRKLGAELDLFS-FPEEIGPGLVVFHPKGAMLRHLIEEHVIARHMEAG 308 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHEEV 113 + P + L+ SG Y M R + + + Sbjct: 309 FNFVHTPEITKGGLFHTSGHLPYYADTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPM 368 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IFRS +SYR LP F+++ +R E G+ R R F D++++ + Sbjct: 369 HNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGE 428 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 K +L I GL + + +FI + Sbjct: 429 -IKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDED-----------WQVAT 476 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y + ++ D++ ++S + Sbjct: 477 DTLDQVCRSTGLQLVPDPGGAAFYGPKV---SVQVRDAIGRTWQMSTIQYDFNQP----- 528 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + ADG + S +G++ V+ + G +W Sbjct: 529 ---ERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW------LSPVQ 579 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + + + D L G V D ++ G + A P +I G + Sbjct: 580 VRLVPVAEAFNDYVTGFAEVLGSRGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDA 639 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYAS 439 V + R + L+E + + Sbjct: 640 EAGAVSFRLRDGSQVNGVVLDEAVRIIA 667 >gi|314981048|gb|EFT25142.1| threonyl-tRNA synthetase [Propionibacterium acnes HL110PA3] gi|315091876|gb|EFT63852.1| threonyl-tRNA synthetase [Propionibacterium acnes HL110PA4] Length = 689 Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats. Identities = 66/448 (14%), Positives = 129/448 (28%), Gaps = 45/448 (10%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + ++E R D +L L + + G+ + P G + + G Sbjct: 250 YQQRIKEAERRDHRKLGAELDLFS-FPEEIGPGLVVFHPKGAMLRHLIEEHVIARHMEAG 308 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHEEV 113 + P + L+ SG Y M R + + + Sbjct: 309 FNFVHTPEITKGGLFHTSGHLPYYAGTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPM 368 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IFRS +SYR LP F+++ +R E G+ R R F D++++ + Sbjct: 369 HNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGE 428 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 K +L I GL + + +FI + Sbjct: 429 -IKKQIEFFLSILADFGLNDFYLELSTRESDSAKEEKFIGSDED-----------WQVAT 476 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y + ++ D++ ++S + Sbjct: 477 DTLDQVCRSTGLQLVPDPGGAAFYGPKV---SVQVRDAIGRTWQMSTIQYDFNQP----- 528 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + ADG + S +G++ V+ + G +W Sbjct: 529 ---ERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW------LSPVQ 579 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + + + D L G V D ++ G + A P +I G + Sbjct: 580 VRLVPVAEAFNDYVTGFAEVLGSHGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDA 639 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYAS 439 V + R + L+E + + Sbjct: 640 EAGAVSFRLRDGSQINGVVLDEAVRIIT 667 >gi|282853974|ref|ZP_06263311.1| threonine--tRNA ligase [Propionibacterium acnes J139] gi|282583427|gb|EFB88807.1| threonine--tRNA ligase [Propionibacterium acnes J139] Length = 684 Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats. Identities = 66/448 (14%), Positives = 129/448 (28%), Gaps = 45/448 (10%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + ++E R D +L L + + G+ + P G + + G Sbjct: 245 YQQRIKEAERRDHRKLGAELDLFS-FPEEIGPGLVVFHPKGAMLRHLIEEHVIARHMEAG 303 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHEEV 113 + P + L+ SG Y M R + + + Sbjct: 304 FNFVHTPEITKGGLFHTSGHLPYYAGTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPM 363 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IFRS +SYR LP F+++ +R E G+ R R F D++++ + Sbjct: 364 HNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGE 423 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 K +L I GL + + +FI + Sbjct: 424 -IKKQIEFFLSILADFGLNDFYLELSTRESDSAKEEKFIGSDED-----------WQVAT 471 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y + ++ D++ ++S + Sbjct: 472 DTLDQVCRSTGLQLVPDPGGAAFYGPKV---SVQVRDAIGRTWQMSTIQYDFNQP----- 523 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + ADG + S +G++ V+ + G +W Sbjct: 524 ---ERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW------LSPVQ 574 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + + + D L G V D ++ G + A P +I G + Sbjct: 575 VRLVPVAEAFNDYVTGFAEVLGSHGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDA 634 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYAS 439 V + R + L+E + + Sbjct: 635 EAGAVSFRLRDGSQINGVVLDEAVRIIT 662 >gi|327331893|gb|EGE73630.1| threonine--tRNA ligase [Propionibacterium acnes HL096PA3] Length = 689 Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats. Identities = 66/448 (14%), Positives = 129/448 (28%), Gaps = 45/448 (10%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + ++E R D +L L + + G+ + P G + + G Sbjct: 250 YQQRIKEAERRDHRKLGAELDLFS-FPEEIGPGLVVFHPKGAMLRHLIEEHVIARHMEAG 308 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHEEV 113 + P + L+ SG Y M R + + + Sbjct: 309 FNFVHTPEITKGGLFHTSGHLPYYADTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPM 368 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IFRS +SYR LP F+++ +R E G+ R R F D++++ + Sbjct: 369 HNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGE 428 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 K +L I GL + + +FI + Sbjct: 429 -IKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDED-----------WQVAT 476 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y + ++ D++ ++S + Sbjct: 477 DTLDQVCRSTGLQLVPDPGGAAFYGPKV---SVQVRDAIGRTWQMSTIQYDFNQP----- 528 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + ADG + S +G++ V+ + G +W Sbjct: 529 ---ERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW------LSPVQ 579 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + + + D L G V D ++ G + A P +I G + Sbjct: 580 VRLVPVAEAFNDYVTGFAEVLGSRGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDA 639 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYAS 439 V + R + L+E + + Sbjct: 640 EAGAVSFRLRDGSQVNGVVLDEAVRIIA 667 >gi|317008889|gb|ADU79469.1| prolyl-tRNA synthetase [Helicobacter pylori India7] Length = 577 Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats. Identities = 100/235 (42%), Positives = 135/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDEEFLNTQNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I LGL + A+SG IGG S EF+VL + GE + K+ D+ E Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKNC-DYAANIE 234 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 90/187 (48%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P + + +EVGHIF G Y+ + A+F +GK+ + +MG Y Sbjct: 390 ADIVQVKESDHCPNCQGALEYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++ ++E D G +W + APF + ++ D+ + ++Y RL + G Sbjct: 450 GIGISRLLSTILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D DD + G++ +L+G L +I+G + + + E R ++ + E+ Sbjct: 510 DALLDDRDARFGAKMRDFELIGERLALIIGKQTLESREFECIKRANLEKQTLKDIELEEK 569 Query: 438 ASHRFSN 444 ++ Sbjct: 570 ILEMLAS 576 >gi|157150969|ref|YP_001451117.1| prolyl-tRNA synthetase [Streptococcus gordonii str. Challis substr. CH1] gi|189083519|sp|A8AZA7|SYP_STRGC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157075763|gb|ABV10446.1| prolyl-tRNA synthetase [Streptococcus gordonii str. Challis substr. CH1] Length = 616 Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats. Identities = 110/394 (27%), Positives = 183/394 (46%), Gaps = 19/394 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH L+LR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALLLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SADLW ESGRY++YG ++ +L +R I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLSADLWRESGRYETYGDDLFKLKNREGSDFILGPTHEETFTALVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVTYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV----LADTGETQVFCSKDFMDFPIPSEN 236 Y +IF R + + + G +GG S EF+ D V IP++ Sbjct: 181 YEKIFTRSEIDFKAIIGDGGAMGGKDSQEFMAITPDRTDLDRWLVLDKSVASLDEIPADV 240 Query: 237 TDFDDIISLNSIVEQWT-------APYAATSDVHNEKLFDS--------LPENKRVSARG 281 + N +V + YAA ++ + S L + + + Sbjct: 241 LEAIKAELSNWMVSGEDTIAYSSESSYAANLEMATNEYKPSNRVVAETELVRVETPNCKT 300 Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 I+ F ++ + + + + +G+ + +++ + + Sbjct: 301 IDEVAAFLQVSEEQTIKTLVYIADEKPVVALLVGNDQLNEVKLKNHLGADFFEAATEAEV 360 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 + + + ++ LS Sbjct: 361 QELFGANFGSLGPVNLPEEVTIIADRKVQDLSNA 394 Score = 146 bits (369), Expect = 6e-33, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 16/200 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ V RGIE+GHIF GT+YS M+AT +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGNGVLKFARGIEIGHIFKLGTRYSDSMNATVLDENGRAVPL 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 VMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLIPVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +KI L G +V DD E++G +F+ +DL+G P++V VG K ++ VE+K Sbjct: 534 ESLALTDKIEESLVGAGYEVLVDDRNERVGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYAS 439 + +G ++ + +I S Sbjct: 593 IKASGDTIEVHADNLIETLS 612 >gi|325688976|gb|EGD30984.1| proline--tRNA ligase [Streptococcus sanguinis SK115] Length = 616 Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats. Identities = 101/242 (41%), Positives = 148/242 (61%), Gaps = 2/242 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDAAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +IF R L + + G +GG S EF+ + + +D + S + + Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMAITP--DRTDLNRWMVLDKSVASFDEIPE 238 Query: 241 DI 242 D+ Sbjct: 239 DV 240 Score = 146 bits (369), Expect = 6e-33, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 16/200 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M+A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLKFARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPM 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEFRYAWGINFPKELAPFDVHLIPVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ++I A L G +V DD E+ G +F+ +DL+G P++V VG K ++ VE+K Sbjct: 534 EALTLTDQIEANLLSAGYEVLVDDRNERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYAS 439 + TG ++ + ++ S Sbjct: 593 IKATGDTIEVHADNLLETLS 612 >gi|50842554|ref|YP_055781.1| threonyl-tRNA synthetase [Propionibacterium acnes KPA171202] gi|289426579|ref|ZP_06428319.1| threonine--tRNA ligase [Propionibacterium acnes J165] gi|295130636|ref|YP_003581299.1| threonine--tRNA ligase [Propionibacterium acnes SK137] gi|73919815|sp|Q6A8U3|SYT_PROAC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|50840156|gb|AAT82823.1| threonyl-tRNA synthetase [Propionibacterium acnes KPA171202] gi|289160223|gb|EFD08387.1| threonine--tRNA ligase [Propionibacterium acnes J165] gi|291376551|gb|ADE00406.1| threonine--tRNA ligase [Propionibacterium acnes SK137] gi|332675479|gb|AEE72295.1| threonine--tRNA ligase [Propionibacterium acnes 266] Length = 684 Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats. Identities = 66/448 (14%), Positives = 129/448 (28%), Gaps = 45/448 (10%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + ++E R D +L L + + G+ + P G + + G Sbjct: 245 YQQRIKEAERRDHRKLGAELDLFS-FPEEIGPGLVVFHPKGAMLRHLIEEHVIARHMEAG 303 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHEEV 113 + P + L+ SG Y M R + + + Sbjct: 304 FNFVHTPEITKGGLFHTSGHLPYYADTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPM 363 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IFRS +SYR LP F+++ +R E G+ R R F D++++ + Sbjct: 364 HNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGE 423 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 K +L I GL + + +FI + Sbjct: 424 -IKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDED-----------WQVAT 471 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y + ++ D++ ++S + Sbjct: 472 DTLDQVCRSTGLQLVPDPGGAAFYGPKV---SVQVRDAIGRTWQMSTIQYDFNQP----- 523 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + ADG + S +G++ V+ + G +W Sbjct: 524 ---ERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW------LSPVQ 574 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + + + D L G V D ++ G + A P +I G + Sbjct: 575 VRLVPVAEAFNDYVTGFAEVLGSRGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDA 634 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYAS 439 V + R + L+E + + Sbjct: 635 EAGAVSFRLRDGSQVNGVVLDEAVRIIA 662 >gi|313764410|gb|EFS35774.1| threonyl-tRNA synthetase [Propionibacterium acnes HL013PA1] gi|313772208|gb|EFS38174.1| threonyl-tRNA synthetase [Propionibacterium acnes HL074PA1] gi|313807564|gb|EFS46051.1| threonyl-tRNA synthetase [Propionibacterium acnes HL087PA2] gi|313810073|gb|EFS47794.1| threonyl-tRNA synthetase [Propionibacterium acnes HL083PA1] gi|313815947|gb|EFS53661.1| threonyl-tRNA synthetase [Propionibacterium acnes HL059PA1] gi|313818605|gb|EFS56319.1| threonyl-tRNA synthetase [Propionibacterium acnes HL046PA2] gi|313820374|gb|EFS58088.1| threonyl-tRNA synthetase [Propionibacterium acnes HL036PA1] gi|313822822|gb|EFS60536.1| threonyl-tRNA synthetase [Propionibacterium acnes HL036PA2] gi|313825247|gb|EFS62961.1| threonyl-tRNA synthetase [Propionibacterium acnes HL063PA1] gi|313827535|gb|EFS65249.1| threonyl-tRNA synthetase [Propionibacterium acnes HL063PA2] gi|313830403|gb|EFS68117.1| threonyl-tRNA synthetase [Propionibacterium acnes HL007PA1] gi|313833773|gb|EFS71487.1| threonyl-tRNA synthetase [Propionibacterium acnes HL056PA1] gi|314915402|gb|EFS79233.1| threonyl-tRNA synthetase [Propionibacterium acnes HL005PA4] gi|314918317|gb|EFS82148.1| threonyl-tRNA synthetase [Propionibacterium acnes HL050PA1] gi|314920127|gb|EFS83958.1| threonyl-tRNA synthetase [Propionibacterium acnes HL050PA3] gi|314925261|gb|EFS89092.1| threonyl-tRNA synthetase [Propionibacterium acnes HL036PA3] gi|314931649|gb|EFS95480.1| threonyl-tRNA synthetase [Propionibacterium acnes HL067PA1] gi|314955705|gb|EFT00107.1| threonyl-tRNA synthetase [Propionibacterium acnes HL027PA1] gi|314958104|gb|EFT02207.1| threonyl-tRNA synthetase [Propionibacterium acnes HL002PA1] gi|314959956|gb|EFT04058.1| threonyl-tRNA synthetase [Propionibacterium acnes HL002PA2] gi|314973405|gb|EFT17501.1| threonyl-tRNA synthetase [Propionibacterium acnes HL053PA1] gi|314976084|gb|EFT20179.1| threonyl-tRNA synthetase [Propionibacterium acnes HL045PA1] gi|314978527|gb|EFT22621.1| threonyl-tRNA synthetase [Propionibacterium acnes HL072PA2] gi|314983896|gb|EFT27988.1| threonyl-tRNA synthetase [Propionibacterium acnes HL005PA1] gi|314988078|gb|EFT32169.1| threonyl-tRNA synthetase [Propionibacterium acnes HL005PA2] gi|314989885|gb|EFT33976.1| threonyl-tRNA synthetase [Propionibacterium acnes HL005PA3] gi|315085609|gb|EFT57585.1| threonyl-tRNA synthetase [Propionibacterium acnes HL002PA3] gi|315088339|gb|EFT60315.1| threonyl-tRNA synthetase [Propionibacterium acnes HL072PA1] gi|315095950|gb|EFT67926.1| threonyl-tRNA synthetase [Propionibacterium acnes HL038PA1] gi|315101418|gb|EFT73394.1| threonyl-tRNA synthetase [Propionibacterium acnes HL046PA1] gi|315105605|gb|EFT77581.1| threonyl-tRNA synthetase [Propionibacterium acnes HL030PA1] gi|315108634|gb|EFT80610.1| threonyl-tRNA synthetase [Propionibacterium acnes HL030PA2] gi|327326232|gb|EGE68022.1| threonine--tRNA ligase [Propionibacterium acnes HL096PA2] gi|327443095|gb|EGE89749.1| threonyl-tRNA synthetase [Propionibacterium acnes HL013PA2] gi|327445877|gb|EGE92531.1| threonyl-tRNA synthetase [Propionibacterium acnes HL043PA2] gi|327448141|gb|EGE94795.1| threonyl-tRNA synthetase [Propionibacterium acnes HL043PA1] gi|327450737|gb|EGE97391.1| threonyl-tRNA synthetase [Propionibacterium acnes HL087PA3] gi|327453921|gb|EGF00576.1| threonyl-tRNA synthetase [Propionibacterium acnes HL083PA2] gi|328753425|gb|EGF67041.1| threonyl-tRNA synthetase [Propionibacterium acnes HL020PA1] gi|328754156|gb|EGF67772.1| threonyl-tRNA synthetase [Propionibacterium acnes HL087PA1] gi|328760808|gb|EGF74374.1| threonine--tRNA ligase [Propionibacterium acnes HL099PA1] Length = 689 Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats. Identities = 66/448 (14%), Positives = 129/448 (28%), Gaps = 45/448 (10%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + ++E R D +L L + + G+ + P G + + G Sbjct: 250 YQQRIKEAERRDHRKLGAELDLFS-FPEEIGPGLVVFHPKGAMLRHLIEEHVIARHMEAG 308 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHEEV 113 + P + L+ SG Y M R + + + Sbjct: 309 FNFVHTPEITKGGLFHTSGHLPYYADTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPM 368 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IFRS +SYR LP F+++ +R E G+ R R F D++++ + Sbjct: 369 HNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGE 428 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 K +L I GL + + +FI + Sbjct: 429 -IKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDED-----------WQVAT 476 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y + ++ D++ ++S + Sbjct: 477 DTLDQVCRSTGLQLVPDPGGAAFYGPKV---SVQVRDAIGRTWQMSTIQYDFNQP----- 528 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + ADG + S +G++ V+ + G +W Sbjct: 529 ---ERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW------LSPVQ 579 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + + + D L G V D ++ G + A P +I G + Sbjct: 580 VRLVPVAEAFNDYVTGFAEVLGSRGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDA 639 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYAS 439 V + R + L+E + + Sbjct: 640 EAGAVSFRLRDGSQVNGVVLDEAVRIIA 667 >gi|50915027|ref|YP_060999.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10394] gi|139474448|ref|YP_001129164.1| prolyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo] gi|81822684|sp|Q5X9U7|SYP_STRP6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|152112957|sp|A2RGI4|SYP_STRPG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|50904101|gb|AAT87816.1| Prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10394] gi|134272695|emb|CAM30966.1| prolyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo] Length = 618 Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats. Identities = 109/307 (35%), Positives = 159/307 (51%), Gaps = 19/307 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQSKLLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R++ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHHNYEDLDVTYEDYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA------DTGETQVFCSKDFMDFPIPS 234 Y IF R GL + + G +GG S EF+ + D D P Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAITPARTDLDRWVVLDKSIASMDDIPKEV 240 Query: 235 ENTDFDDIISLNSIVEQWTAP-----YAATSDVHN--------EKLFDSLPENKRVSARG 281 ++ + E A YAA ++ D+L E + + Sbjct: 241 LEEIKAELAAWMISGEDTIAYSTESSYAANLEMATNEYKPSSKVAAEDALAEVETPHCKT 300 Query: 282 IEVGHIF 288 I+ F Sbjct: 301 IDEVAAF 307 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ V RGIEVGHIF GT+YS M A +G+ + Sbjct: 414 FQAEYVDIREVKEGEMSPDGHGVLQFARGIEVGHIFKLGTRYSDSMGAKILDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P +APF + LI + DQ Sbjct: 474 VMGCYGIGVSRILSAVIEQHARLFVNKTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQ 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +D K+ A L G DV DD E++GS+F+ +DL+G P++V VG K ++ VEIK Sbjct: 534 AAQDLTAKLEADLMAKGYDVLTDDRNERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIK 592 Query: 420 HRLTGIREDMSLEEVINYA 438 + TG +++ E +I Sbjct: 593 IKATGDSIEVNAENLIETL 611 >gi|332359971|gb|EGJ37785.1| proline--tRNA ligase [Streptococcus sanguinis SK1056] Length = 616 Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 138/212 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDAAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 Y +IF R L + + G +GG S EF+ Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMA 212 Score = 146 bits (367), Expect = 9e-33, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 16/200 (8%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + ARGIE+GHIF GT+YS M+A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGILKFARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPL 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEFRYAWGINFPKELAPFDVHLIPVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ++I A L G +V DD E+ G +F+ +DL+G P++V VG K ++ VE+K Sbjct: 534 EALTLTDQIEANLLSAGYEVLVDDRNERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYAS 439 + TG ++ + ++ S Sbjct: 593 IKATGDTIEVHADNLLETLS 612 >gi|317012082|gb|ADU82690.1| prolyl-tRNA synthetase [Helicobacter pylori Lithuania75] Length = 577 Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats. Identities = 100/235 (42%), Positives = 135/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I LGL + A+SG IGG S EF+VL + GE + K+ D+ E Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKNC-DYAANIE 234 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 47/173 (27%), Positives = 87/173 (50%), Gaps = 2/173 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P + + +EVGHIF G Y+ + A+F +GK+ + +MG Y Sbjct: 390 ADIVQVKESDHCPNCQGALKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E D G +W + APF + ++ D + ++Y RL + G Sbjct: 450 GIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDGAQKKLAFEVYERLLQKGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 D DD + G++ +L+G L +I+G + + + + E R ++ + Sbjct: 510 DALLDDRDARFGAKMRDFELIGERLALIIGKQTLENKEFECIKRANLEKQTLK 562 >gi|323126466|gb|ADX23763.1| prolyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 618 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 108/307 (35%), Positives = 158/307 (51%), Gaps = 19/307 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG ++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGDDLYKLKNRDKSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y + Sbjct: 121 AVKSYKQLPLNLYQIQAKYRDEKRPRNGLLRTREFIMKDGYSFHPNYDDLDVTYEDYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA------DTGETQVFCSKDFMDFPIPS 234 Y IF R GL + + G +GG S EF+ + D D P Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAITPERTDLDRWVVLDKSIPSLADIPEEV 240 Query: 235 ENTDFDDIISLNSIVEQWTAP-----YAATSDVHN--------EKLFDSLPENKRVSARG 281 ++ + E A YAA ++ D+L E + + + Sbjct: 241 LEEIKAELTAWMISGEDTIAYSSESSYAANLEMATNEYKPSSKVAAEDALTEVETPNCKT 300 Query: 282 IEVGHIF 288 I+ F Sbjct: 301 IDEVADF 307 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ + RGIEVGHIF GT+YS M AT +G+ + Sbjct: 414 FQAEYVDIREVKEGEMSPDGHGILQFARGIEVGHIFKLGTRYSDSMGATILDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P +APF + LI + DQ Sbjct: 474 VMGCYGIGVSRILSAVIEQHARLFVNKTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQ 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +D + A L G DV DD E++GS+F+ +DL+G P++V VG K +D VEIK Sbjct: 534 AAQDLTATLEADLMANGYDVLTDDRNERVGSKFSDSDLIGLPIRVTVGKK-AADGIVEIK 592 Query: 420 HRLTGIREDMSLEEVINYA 438 + TG +++ + +I Sbjct: 593 IKATGDSIEVTADNLIETL 611 >gi|322411037|gb|EFY01945.1| prolyl-tRNA synthetase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 618 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 108/307 (35%), Positives = 158/307 (51%), Gaps = 19/307 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG ++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGDDLYKLKNRDKSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y + Sbjct: 121 AVKSYKQLPLNLYQIQAKYRDEKRPRNGLLRTREFIMKDGYSFHPNYDDLDVTYEDYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA------DTGETQVFCSKDFMDFPIPS 234 Y IF R GL + + G +GG S EF+ + D D P Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAITPERTDLDRWVVLDKSIPSLADIPEEV 240 Query: 235 ENTDFDDIISLNSIVEQWTAP-----YAATSDVHN--------EKLFDSLPENKRVSARG 281 ++ + E A YAA ++ D+L E + + + Sbjct: 241 LEEIKAELTAWMISGEDTIAYSSESSYAANLEMATNEYKPSSKVAAEDALTEVETPNCKT 300 Query: 282 IEVGHIF 288 I+ F Sbjct: 301 IDEVADF 307 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ V RGIEVGHIF GT+YS M AT +G+ + Sbjct: 414 FQAEYVDIREVKEGEMSPDGHGVLQFARGIEVGHIFKLGTRYSDSMGATILDDNGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P +APF + LI + DQ Sbjct: 474 VMGCYGIGVSRILSAVIEQHARLFVNKTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQ 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +D + A L G DV DD E++GS+F+ +DL+G P++V VG K +D VEIK Sbjct: 534 AAQDLTATLEADLMAKGYDVLTDDRNERVGSKFSDSDLIGLPIRVTVGKK-AADGIVEIK 592 Query: 420 HRLTGIREDMSLEEVINYA 438 + TG +++ + +I Sbjct: 593 IKATGDSVEVTADNLIETL 611 >gi|302783999|ref|XP_002973772.1| hypothetical protein SELMODRAFT_442211 [Selaginella moellendorffii] gi|300158810|gb|EFJ25432.1| hypothetical protein SELMODRAFT_442211 [Selaginella moellendorffii] Length = 795 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 68/432 (15%), Positives = 134/432 (31%), Gaps = 72/432 (16%) Query: 5 KYFLPILQENPR-DAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQN 62 K + +E R D L L + I + G+ W P G + ++ Sbjct: 246 KAYQTQKEEAKRRDHRRLGQDLELFS--IQEDAGGGLVFWHPKGALIRHLIEDYWKKVHL 303 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 R G + P + A+LW SG D Y + M ++ P + I++ + Sbjct: 304 RRGYELLYTPHVAKAELWKTSGHLDFYKENMFEQIKIEEEFYQLRPMNCPFHIQIYKDRV 363 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 +SYR LP ++ E + + F +Y Sbjct: 364 RSYRELP--------------------IKFAELEQIRGEIKSVLDLTEEILSQFGFQNYE 403 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + T + S D + D Sbjct: 404 -----------------------------INLSTKPEKAVGSDDIWHKATEALKDAISDK 434 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I E A Y D+ K+ D++ + S ++ F ++ T+ Sbjct: 435 GWTYGIDEGGGAFYGPKIDL---KIEDAIGRTWQCSTIQVD----FNLPERFD----LTY 483 Query: 303 KGADG-KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 + + + G++ ++ + +P +AP + L+ + + Sbjct: 484 VDPSQARKQPIMIHRAIFGSIERFVGILI---ESYAGDFPLWIAPVQARLLPVTDTE--- 537 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 C+++ ARL + GE++ A++ PL +VG K V + ++ R Sbjct: 538 LPYCKQVLARLREKDIRAEI-ACGERLSKLIRNAEVQKIPLMAVVGPKEVEAQTLTVRTR 596 Query: 422 LTGIREDMSLEE 433 G +S++E Sbjct: 597 HGGELGTLSVDE 608 >gi|199597103|ref|ZP_03210535.1| prolyl-tRNA synthetase [Lactobacillus rhamnosus HN001] gi|258508613|ref|YP_003171364.1| prolyl-tRNA synthetase [Lactobacillus rhamnosus GG] gi|199591907|gb|EDY99981.1| prolyl-tRNA synthetase [Lactobacillus rhamnosus HN001] gi|257148540|emb|CAR87513.1| Prolyl-tRNA synthetase [Lactobacillus rhamnosus GG] gi|259649920|dbj|BAI42082.1| prolyl-tRNA synthetase [Lactobacillus rhamnosus GG] Length = 576 Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats. Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ F+P +E P AE SHK+MLR+G + Q G+Y++LPL ++ L + AII +E Sbjct: 1 MKQSRMFIPTEKEVPSSAEAKSHKMMLRSGFVRQVQAGVYAYLPLAERVLSRIEAIIDDE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + A++M +P L A+LW ESGRY++YG + +L +R D+ MI GPTHEE TD+ R+ Sbjct: 61 MTKIDAVKMKMPALLPAELWEESGRYETYGPNLFKLKNRQDRKMILGPTHEETFTDLVRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ +P YQIQ KFRDE RPR+GV+R REF+M+DAYSF + Y +M + Sbjct: 121 ELKSYKRMPLVLYQIQDKFRDEDRPRYGVLRGREFIMQDAYSFTSNDQDLDTIYRQMEHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y IF RLGL+ + + G +GG S EF +A GE + S D+ E Sbjct: 181 YTNIFDRLGLRYRTIIGDGGAMGGKDSKEFSAIASIGEDTIVYSDS-SDYAANLE 234 Score = 156 bits (393), Expect = 9e-36, Method: Composition-based stats. Identities = 70/182 (38%), Positives = 101/182 (55%), Gaps = 3/182 (1%) Query: 260 SDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K + P+ + V RGIE+GHIF GT+YS M A F +G+ + MGSY Sbjct: 382 ADIRFVKEGEVSPDGQGVLKFTRGIEIGHIFKLGTRYSETMGADFLDENGRSQPIIMGSY 441 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A+ E D G+IWP ++APF I LI + + + I L G Sbjct: 442 GIGVSRLLSAIAEQQADDHGLIWPTTIAPFDIHLIPVNLKREEQKTLTASIGTMLEDAGY 501 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 V DD E+ G +FA +DL+G PL+V VG K V + VE+K R TG ++ EE+I+ Sbjct: 502 SVLVDDRNERPGVKFADSDLIGIPLRVTVGKKAVDE-IVELKLRKTGETIEVKKEELISS 560 Query: 438 AS 439 Sbjct: 561 IK 562 >gi|331001642|ref|ZP_08325165.1| threonyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167] gi|330413363|gb|EGG92730.1| threonyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167] Length = 651 Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats. Identities = 71/444 (15%), Positives = 148/444 (33%), Gaps = 37/444 (8%) Query: 8 LPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIRE-EQNRTG 65 L L++ RD ++ L T + +G+ LP G K + + I + E N G Sbjct: 230 LKHLEDIKLRDHNKLGREMELFTT-VDVIGQGLPLMLPKGTKMIQKLQRWIEDLEDNEWG 288 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD--RNDKAMIYGPTHEEVMTDIFRSHIK 123 + P + +DL+ SG +D Y M L D + + + P ++++ K Sbjct: 289 YVRTKTPLMAKSDLYKISGHWDHYQDGMFILGDPQNDGEILALRPMTCPFQYYVYKNTQK 348 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP+ + FR+E G+ R R+F + + ++ + + N + ++ Sbjct: 349 SYRDLPYRMGETSTLFRNEDSGEMHGLTRVRQFTISEGHNVIRPDQAEEELQNCLNLAI- 407 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + + D++ + + + + + + Sbjct: 408 ------------YVLDILGLRDDVTFRLSKWDKNNKGKYLGDDAYWEGTQAALRNILVEK 455 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 + + A Y D+ + ++ K + I + + Sbjct: 456 GLPFTEADGEAAFYGPKIDIQAKNVY-----GKEDTMITI------QLDAAIAENFDLYY 504 Query: 303 KGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G + +G A + + GK W + + ++ I Sbjct: 505 IDQSGAKVRPYIVHRTSLGCYERTLAWLIEKYAGKFPTWLCAEQ---VRILPISDK---Y 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 + + L K G D D E+IG + A L P ++VG K ++ V ++ R Sbjct: 559 AEYANIVLKELKKNGVDATVDTRTEKIGFKIRDARLSRLPYMLVVGEKEEAEGSVSVRSR 618 Query: 422 LTGIREDMSLEEVINYASHRFSNN 445 G L + ++ Sbjct: 619 FAGDEGSKKLSDFVDMICKEIRTK 642 >gi|317010519|gb|ADU84266.1| prolyl-tRNA synthetase [Helicobacter pylori SouthAfrica7] Length = 577 Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats. Identities = 100/235 (42%), Positives = 137/235 (58%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQIGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDEEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I + LGL + A+SG IGG+ S EF+VL + GE + K+ D+ E Sbjct: 181 YKEILNDLGLDFRIVEADSGAIGGNKSKEFVVLTECGEDTIVVCKNC-DYAANIE 234 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P + + +EVGHIF G Y+ + A+F +GK+ + +MG Y Sbjct: 390 ADIIQVKESDCCPNCQGALKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKEQFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E D G +W + APF + ++ D+ + ++Y RL + G Sbjct: 450 GIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNLKDEAQKKLAFEVYERLLQKGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 DV DD + G++ +L+G L +IVG + + + E R ++ + E+ Sbjct: 510 DVLLDDRDARFGAKMRDFELIGERLALIVGKQTLESREFECIKRANLEKQTLKDTELEEK 569 Query: 438 ASHRFSN 444 + Sbjct: 570 ILEILES 576 >gi|309799607|ref|ZP_07693832.1| prolyl-tRNA synthetase [Streptococcus infantis SK1302] gi|308116758|gb|EFO54209.1| prolyl-tRNA synthetase [Streptococcus infantis SK1302] Length = 617 Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats. Identities = 104/257 (40%), Positives = 147/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKMGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP + Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWVVLDKSVASFDEIPDQV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L +V Sbjct: 241 QEEIKAELLKWMVSGED 257 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ K V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGKGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLIPVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +I L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 ASLTLTNRIEEALVNKGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ ++ ++ N+ Sbjct: 593 IKATGDTIEVHVDSLLETL--EILTNK 617 >gi|289425232|ref|ZP_06427009.1| threonine--tRNA ligase [Propionibacterium acnes SK187] gi|289154210|gb|EFD02898.1| threonine--tRNA ligase [Propionibacterium acnes SK187] Length = 684 Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats. Identities = 66/447 (14%), Positives = 132/447 (29%), Gaps = 43/447 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + ++E R D +L L + + G+ + P G + + G Sbjct: 245 YQQRIKEAERRDHRKLGAELDLFS-FPEEIGPGLVVFHPKGAMLRHLIEEHVIARHMEAG 303 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHEEV 113 + P + L+ SG Y M R + + + Sbjct: 304 FNFVHTPEITKGGLFHTSGHLPYYADTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPM 363 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IFRS +SYR LP F+++ +R E G+ R R F D++++ + Sbjct: 364 HNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGE 423 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 K +L I GL + + +FI + Sbjct: 424 -IKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDED-----------WQVAT 471 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y + ++ D++ ++S + F Sbjct: 472 DTLDQVCRSTGLQLVPDPGGAAFYGPKV---SVQVRDAIGRTWQMSTIQYD----FNQPE 524 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 ++ L +A + + S +G++ V+ + G +W + Sbjct: 525 RFDLEYAAA---DSTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW------LSPVQV 575 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 + + D L G V D ++ G + A P +I G + Sbjct: 576 RLVPVAEAFNDYVTGFAEVLGSRGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDAE 635 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYAS 439 V + R + L+E + + Sbjct: 636 AGAVSFRLRDGSQVNGVVLDEAVRIIA 662 >gi|313792096|gb|EFS40197.1| threonyl-tRNA synthetase [Propionibacterium acnes HL110PA1] gi|313801952|gb|EFS43186.1| threonyl-tRNA synthetase [Propionibacterium acnes HL110PA2] gi|313812897|gb|EFS50611.1| threonyl-tRNA synthetase [Propionibacterium acnes HL025PA1] gi|313838778|gb|EFS76492.1| threonyl-tRNA synthetase [Propionibacterium acnes HL086PA1] gi|314962753|gb|EFT06853.1| threonyl-tRNA synthetase [Propionibacterium acnes HL082PA1] gi|315077970|gb|EFT50021.1| threonyl-tRNA synthetase [Propionibacterium acnes HL053PA2] gi|327453186|gb|EGE99840.1| threonyl-tRNA synthetase [Propionibacterium acnes HL092PA1] Length = 689 Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats. Identities = 66/447 (14%), Positives = 132/447 (29%), Gaps = 43/447 (9%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + ++E R D +L L + + G+ + P G + + G Sbjct: 250 YQQRIKEAERRDHRKLGAELDLFS-FPEEIGPGLVVFHPKGAMLRHLIEEHVIARHMEAG 308 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHEEV 113 + P + L+ SG Y M R + + + Sbjct: 309 FNFVHTPEITKGGLFHTSGHLPYYADTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPM 368 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IFRS +SYR LP F+++ +R E G+ R R F D++++ + Sbjct: 369 HNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGE 428 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 K +L I GL + + +FI + Sbjct: 429 -IKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDED-----------WQVAT 476 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y + ++ D++ ++S + F Sbjct: 477 DTLDQVCRSTGLQLVPDPGGAAFYGPKV---SVQVRDAIGRTWQMSTIQYD----FNQPE 529 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 ++ L +A + + S +G++ V+ + G +W + Sbjct: 530 RFDLEYAAA---DSTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW------LSPVQV 580 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVS 412 + + D L G V D ++ G + A P +I G + Sbjct: 581 RLVPVAEAFNDYVTGFAEVLGSRGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDAE 640 Query: 413 DSKVEIKHRLTGIREDMSLEEVINYAS 439 V + R + L+E + + Sbjct: 641 AGAVSFRLRDGSQVNGVVLDEAVRIIA 667 >gi|314923371|gb|EFS87202.1| threonyl-tRNA synthetase [Propionibacterium acnes HL001PA1] gi|315093365|gb|EFT65341.1| threonyl-tRNA synthetase [Propionibacterium acnes HL060PA1] gi|315103379|gb|EFT75355.1| threonyl-tRNA synthetase [Propionibacterium acnes HL050PA2] gi|327327544|gb|EGE69320.1| threonine--tRNA ligase [Propionibacterium acnes HL103PA1] Length = 689 Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats. Identities = 66/448 (14%), Positives = 129/448 (28%), Gaps = 45/448 (10%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + ++E R D +L L + + G+ + P G + + G Sbjct: 250 YQQRIKEAERRDHRKLGAELDLFS-FPEEIGPGLVVFHPKGAMLRHLIEEHVIARHMEAG 308 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHEEV 113 + P + L+ SG Y M R + + + Sbjct: 309 FNFVHTPEITKGGLFHTSGHLPYYAGTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPM 368 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IFRS +SYR LP F+++ +R E G+ R R F D++++ + Sbjct: 369 HNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGE 428 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 K +L I GL + + +FI + Sbjct: 429 -IKKQIEFFLSILADFGLNDFYLELSTRESDSAKEEKFIGSDED-----------WQVAT 476 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y + ++ D++ ++S + Sbjct: 477 DTLDQVCRSTGLQLVPDPGGAAFYGPKV---SVQVRDAIGRTWQMSTIQYDFNQP----- 528 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + ADG + S +G++ V+ + G +W Sbjct: 529 ---ERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW------LSPVQ 579 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + + + D L G V D ++ G + A P +I G + Sbjct: 580 VRLVPVAEAFNDYVTGFAEVLGSRGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDA 639 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYAS 439 V + R + L+E + + Sbjct: 640 EAGAVSFRLRDGSQINGVVLDEAVRIIT 667 >gi|327462766|gb|EGF09088.1| proline--tRNA ligase [Streptococcus sanguinis SK1057] Length = 616 Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 138/212 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKRIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 Y +IF R L + + G +GG S EF+ Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMA 212 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 16/200 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M+A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLKFARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPM 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEFRYAWGINFPKELAPFDVHLIPVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ++I A L G +V DD E+ G +F+ +DL+G P++V VG K ++ VE+K Sbjct: 534 EALALTDQIEANLLSAGYEVLVDDRNERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYAS 439 + TG ++ + ++ S Sbjct: 593 IKATGDTIEVHADNLLETLS 612 >gi|309775936|ref|ZP_07670928.1| proline--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53] gi|308916218|gb|EFP61966.1| proline--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53] Length = 564 Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats. Identities = 97/244 (39%), Positives = 142/244 (58%), Gaps = 1/244 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+EN +D + S L++R GMI + S GIY +P+G++ L + I+REE Sbjct: 1 MKLSNSYFYTLRENVKDEDSTSGNLLVRAGMIKKSSSGIYMIMPMGKRVLKKIEEIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P + +++ +SGR +++G M L DR K + GPTHEE+ T Sbjct: 61 MDAAGAQELLMPAMIPEEIYEKSGRREAFGSNMFALKDRYQKNYVLGPTHEELFTMAAMM 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++ P+ YQIQ KFRDE RPR+G++R REF+MKDAYSFD+ G SY KMF + Sbjct: 121 KGSSYKDFPYNLYQIQTKFRDETRPRYGLIRVREFIMKDAYSFDIDEAGLHESYKKMFHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y I R L ++A++G +GG LS EF + + GE V DF E T+ Sbjct: 181 YENIMERCDLTYKIVKADTGAMGGSLSEEFQAITEIGEDVVVTCDGC-DFSSNLEITEVI 239 Query: 241 DIIS 244 D + Sbjct: 240 DTST 243 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 1/227 (0%) Query: 218 ETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV 277 E + ++ + + D N ++ ++ A +E + Sbjct: 339 ECPIIMDREVANMKNFIVGANKTDHHIKNVNLKDFSVETVADIAQVHEGDICPVCGKPLK 398 Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 +GIEVG+ F GTKY+ + ++ + K H V+MG YG G R +AA++E +D G Sbjct: 399 FCKGIEVGNTFKLGTKYAKALGLEYQDVNNKLHPVEMGCYGFGLERCMAAIVEQHNDASG 458 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP SVAPF+++++ + + D+ ++Y L K G DV DD E+ G +F +L Sbjct: 459 IIWPASVAPFEVAVVVVSSKDEEQMRIGNELYEALKKEGVDVLLDDRKERPGVKFKDMEL 518 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +G P ++ VG + + D VE + R D++L EV+ Sbjct: 519 IGIPYRITVG-RGIKDGNVEFRARTASESSDIALSEVVELVKKELKK 564 >gi|251781674|ref|YP_002995976.1| prolyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390303|dbj|BAH80762.1| prolyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 618 Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats. Identities = 108/307 (35%), Positives = 158/307 (51%), Gaps = 19/307 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG ++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGDDLYKLKNRDKSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y + Sbjct: 121 AVKSYKQLPLNLYQIQAKYRDEKRPRNGLLRTREFIMKDGYSFHPNYDDLDVTYEDYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA------DTGETQVFCSKDFMDFPIPS 234 Y IF R GL + + G +GG S EF+ + D D P Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAITPERTDLDRWVVLDKSIPSLADIPEEV 240 Query: 235 ENTDFDDIISLNSIVEQWTAP-----YAATSDVHN--------EKLFDSLPENKRVSARG 281 ++ + E A YAA ++ D+L E + + + Sbjct: 241 LEEIKAELTAWMISGEDTIAYSSESSYAANLEMATNEYKPSSKVAAEDALTEVETPNCKT 300 Query: 282 IEVGHIF 288 I+ F Sbjct: 301 IDEVADF 307 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 102/199 (51%), Gaps = 16/199 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ + RGIEVGHIF GT+YS M AT +G+ + Sbjct: 414 FQAEYVDIREVKEGEMSPDGHGILQFARGIEVGHIFKLGTRYSDSMGATILDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P +APF + LI + DQ Sbjct: 474 VMGCYGIGVSRILSAVIEQHARLFVNKTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQ 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +D + A L G +V DD E++GS+F+ +DL+G P++V VG K +D VEIK Sbjct: 534 AAQDLTATLEADLMAKGYEVLTDDRNERVGSKFSDSDLIGLPIRVTVGKK-AADGIVEIK 592 Query: 420 HRLTGIREDMSLEEVINYA 438 + TG +++ + +I Sbjct: 593 IKATGDSIEVTADNLIETL 611 >gi|324992477|gb|EGC24398.1| proline--tRNA ligase [Streptococcus sanguinis SK405] gi|324995993|gb|EGC27904.1| proline--tRNA ligase [Streptococcus sanguinis SK678] gi|327460709|gb|EGF07044.1| proline--tRNA ligase [Streptococcus sanguinis SK1] gi|327472430|gb|EGF17861.1| proline--tRNA ligase [Streptococcus sanguinis SK408] Length = 616 Score = 196 bits (498), Expect = 7e-48, Method: Composition-based stats. Identities = 104/257 (40%), Positives = 147/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV----LADTGETQVFCSKDFMDFPIPSEN 236 Y +IF R L + + G +GG S EF+ D V IP E Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMAITPDRTDLNRWVVLDKSVASFDEIPEEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + + +V Sbjct: 241 QEAIRTELTSWMVSGED 257 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 16/200 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M+A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLKFARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPM 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEFRYAWGINFPKELAPFDVHLIPVNIKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +I A L G +V DD E+ G +F+ +DL+G P++V VG K ++ VE+K Sbjct: 534 EALALTNQIEANLLSAGYEVLVDDRNERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYAS 439 + TG ++ + ++ S Sbjct: 593 IKATGDTIEVHADNLLETLS 612 >gi|314966718|gb|EFT10817.1| threonyl-tRNA synthetase [Propionibacterium acnes HL082PA2] Length = 689 Score = 196 bits (498), Expect = 7e-48, Method: Composition-based stats. Identities = 66/448 (14%), Positives = 129/448 (28%), Gaps = 45/448 (10%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + ++E R D +L L + + G+ + P G + + G Sbjct: 250 YQQRIKEAERRDHRKLGAELDLFS-FPEEIGPGLVVFHPKGAMLRHLIEEHVIARHMEAG 308 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHEEV 113 + P + L+ SG Y M R + + + Sbjct: 309 FNFVHTPEITKGGLFHTSGHLPYYAGTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPM 368 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IFRS +SYR LP F+++ +R E G+ R R F D++++ + Sbjct: 369 HNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGE 428 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 K +L I GL + + +FI + Sbjct: 429 -IKKQIEFFLSILADFGLNDFYLELSTRESDSAKEEKFIGSDED-----------WQVAT 476 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y + ++ D++ ++S + Sbjct: 477 DTLDQVCRSTGLRLVPDPGGAAFYGPKV---SVQVRDAIGRTWQMSTIQYDFNQP----- 528 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + ADG + S +G++ V+ + G +W Sbjct: 529 ---ERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW------LSPVQ 579 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + + + D L G V D ++ G + A P +I G + Sbjct: 580 VRLVPVAEAFNDYVTGFAEVLGSRGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDA 639 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYAS 439 V + R + L+E + + Sbjct: 640 EAGAVSFRLRDGSQINGVVLDEAVRIIT 667 >gi|293401596|ref|ZP_06645738.1| proline--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304854|gb|EFE46101.1| proline--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 563 Score = 196 bits (498), Expect = 7e-48, Method: Composition-based stats. Identities = 110/381 (28%), Positives = 173/381 (45%), Gaps = 16/381 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S F ++EN +D + S L++R GMI + S GIY +P+G++ L + I+REE Sbjct: 1 MKLSNSFFYTIRENAKDEDSVSGNLLVRAGMIKKSSSGIYMIMPMGKRVLQKIETIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + TGA E+ +P L +++ +SGR +++G M L DR K + GPTHEE+ T Sbjct: 61 MDATGAQELLMPVLIPEEVYEKSGRREAFGANMFALKDRYQKRYVMGPTHEELFTIAATM 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++ P+ YQIQ KFRDE RPR+G++R REF+MKDAYSFD+ E SY KMF + Sbjct: 121 KGSSYKDFPYNLYQIQTKFRDETRPRYGLIRVREFIMKDAYSFDVDEESMHVSYMKMFHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I RLGL ++A++G +GG LS EF + GE V + +F E T+ Sbjct: 181 YKKIMERLGLTYKIVKADTGAMGGSLSEEFQAITPIGEDVVVGCEHC-NFSSNLEITEVV 239 Query: 241 DIISLN----SIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 D S + +E P A T + + + + ++ + Sbjct: 240 DQASDDTAELRQMEVVKTPDAKTIEEVAAFFQKAADDFVKTLIYKVDGKTYAFLLKGTRE 299 Query: 297 PMSATFK-----------GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 D + G + + +I + Sbjct: 300 LNETKVLKLLQANEMELADFDEVERVTHAKVGFAGPIGIACPIIMDREVTHMKNFIVGAN 359 Query: 346 PFKISLINIKAHDQVCRDACE 366 ++N+ D + Sbjct: 360 QTDHHIVNVNVKDFEVSMIAD 380 Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 98/203 (48%), Gaps = 1/203 (0%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D +N V+ + A E + ++ A+GIEVG+ F GTKY+ + Sbjct: 362 DHHIVNVNVKDFEVSMIADIAQVKEGDICPVCGHRLTFAKGIEVGNTFKLGTKYAESLGL 421 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 ++ K H VQMG YG G R +AA++E +D GIIWP SVAP++++++ + D+ Sbjct: 422 EYQDETNKLHPVQMGCYGFGLGRAMAAIVEQHNDASGIIWPASVAPYQVAIVVVAIKDEE 481 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 +Y LS G DV DD E+ G +F +L+G P ++ VG + D KVE + Sbjct: 482 QMRVATALYEELSAAGIDVVLDDRKERPGVKFKDMELIGIPYRITVG-RGAVDGKVEFRA 540 Query: 421 RLTGIREDMSLEEVINYASHRFS 443 R E+ + E Sbjct: 541 RTASENEEWLISETKAKLMEIVK 563 >gi|125718857|ref|YP_001035990.1| prolyl-tRNA synthetase [Streptococcus sanguinis SK36] gi|152112958|sp|A3CQI5|SYP_STRSV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|125498774|gb|ABN45440.1| Prolyl-tRNA synthetase, putative [Streptococcus sanguinis SK36] Length = 616 Score = 196 bits (498), Expect = 7e-48, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 138/212 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKRIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 Y +IF R L + + G +GG S EF+ Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMA 212 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 16/200 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M+A +G+ + Sbjct: 414 FTAEFVDIREVREGEISPDGQGVLKFARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPM 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEFRYAWGINFPKELAPFDVHLIPVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ++I A L G +V DD E+ G +F+ +DL+G P++V VG K ++ VE+K Sbjct: 534 EALALTDQIEANLLSAGYEVLVDDRNERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYAS 439 + TG ++ + ++ S Sbjct: 593 IKATGDTIEVHADNLLETLS 612 >gi|300870022|ref|YP_003784893.1| prolyl-tRNA synthetase [Brachyspira pilosicoli 95/1000] gi|300687721|gb|ADK30392.1| prolyl-tRNA synthetase [Brachyspira pilosicoli 95/1000] Length = 571 Score = 196 bits (498), Expect = 7e-48, Method: Composition-based stats. Identities = 108/253 (42%), Positives = 157/253 (62%) Query: 8 LPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 +P L+E P DA IAS+KLM+R + + S G+YS+LPLG + L+ ++ IIREE + G+ Sbjct: 1 MPTLKEAPSDAIIASNKLMIRAALARKISNGLYSYLPLGVRVLNKISNIIREEMDAIGSN 60 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 E +P L S +L SGR++ + KE+ RL DRND M GPTHEE T ++ I+SY++ Sbjct: 61 ECIMPILVSKELLTPSGRWERFKKELFRLKDRNDVDMAMGPTHEEAFTITAQNEIQSYKD 120 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 LP T YQI KFRDE+RPRFGV+RS+EF MKDAYSF +T E +YN M +Y +IF R Sbjct: 121 LPVTLYQIHTKFRDEIRPRFGVIRSKEFTMKDAYSFHITKECLDKTYNDMSGAYTKIFKR 180 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNS 247 +GL ++ ++A+SG +GG+ S EF+VL++ GE + + +D + + Sbjct: 181 MGLDTVSVKADSGAMGGEGSEEFMVLSEVGEETIIFCSKCNYRANVEKANVMEDEEAKSY 240 Query: 248 IVEQWTAPYAATS 260 + Y Sbjct: 241 TDKALEEVYTPDI 253 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 64/189 (33%), Positives = 98/189 (51%), Gaps = 2/189 (1%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 D K D PE K +G+E+GHIF G KY+ + T + K MG Sbjct: 374 VWGDFRVAKEGDRCPECGEKLYQKKGLELGHIFKLGDKYTQAFNFTVLDENNKAITPIMG 433 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R +A+VIE ++D KGII+P SVAP++ ++ I + E+IY LS + Sbjct: 434 CYGIGVNRALASVIEQNYDDKGIIFPISVAPYEAIVVAIDKETEESFKKAEEIYKALSAI 493 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G + +DD E++G + DL+G P+++IVG K + VE K R ++ LE+++ Sbjct: 494 GVETMFDDRKERLGVKLNDCDLIGVPMRIIVGKKSLERGVVEFKLRRDLESVEVKLEDIV 553 Query: 436 NYASHRFSN 444 Y + Sbjct: 554 EYVKAKKKE 562 >gi|327468388|gb|EGF13873.1| proline--tRNA ligase [Streptococcus sanguinis SK330] Length = 616 Score = 196 bits (498), Expect = 7e-48, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 138/212 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDAAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 Y +IF R L + + G +GG S EF+ Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMA 212 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 16/200 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M+A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLKFARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPM 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + +I + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEFRYAWGINFPKELAPFDVHMIPVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ++I A L G +V DD E+ G +F+ +DL+G P++V VG K ++ VE+K Sbjct: 534 EALALTDQIEANLLSAGYEVLVDDRNERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYAS 439 + TG ++ + ++ S Sbjct: 593 IKATGDTIEVHADNLLETLS 612 >gi|71904323|ref|YP_281126.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS6180] gi|114152264|sp|Q48R89|SYP_STRPM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|71803418|gb|AAX72771.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS6180] Length = 618 Score = 196 bits (498), Expect = 7e-48, Method: Composition-based stats. Identities = 109/307 (35%), Positives = 159/307 (51%), Gaps = 19/307 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQSKLLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R++ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHHNYEDLDVTYEDYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA------DTGETQVFCSKDFMDFPIPS 234 Y IF R GL + + G +GG S EF+ + D D P Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAVTPARTDLDRWVVLDKSIASMDDIPKEV 240 Query: 235 ENTDFDDIISLNSIVEQWTAP-----YAATSDVHN--------EKLFDSLPENKRVSARG 281 ++ + E A YAA ++ D+L E + + Sbjct: 241 LEDIKAELAAWMISGEDTIAYSTESSYAANLEMATNEYKPSSKVAAEDALAEVETPHCKT 300 Query: 282 IEVGHIF 288 I+ F Sbjct: 301 IDEVAAF 307 Score = 143 bits (360), Expect = 7e-32, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 104/199 (52%), Gaps = 16/199 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ V RGIEVGHIF GT+YS M AT +G+ + Sbjct: 414 FQAEYVDIREVKEGEMSPDGHGVLQFARGIEVGHIFKLGTRYSDSMGATILDENGRTVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P +APF + LI + DQ Sbjct: 474 VMGCYGIGVSRILSAVIEQHARLFVNKTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQ 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 V +D K+ A L G DV DD E++GS+F+ +DL+G P++V VG K ++ VEIK Sbjct: 534 VAQDLTAKLEADLMAKGYDVLTDDRNERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIK 592 Query: 420 HRLTGIREDMSLEEVINYA 438 + TG +++ E +I Sbjct: 593 IKATGDSIEVNAENLIETL 611 >gi|146319615|ref|YP_001199327.1| prolyl-tRNA synthetase [Streptococcus suis 05ZYH33] gi|146321813|ref|YP_001201524.1| prolyl-tRNA synthetase [Streptococcus suis 98HAH33] gi|253752613|ref|YP_003025754.1| prolyl-tRNA synthetase [Streptococcus suis SC84] gi|253754439|ref|YP_003027580.1| prolyl-tRNA synthetase [Streptococcus suis P1/7] gi|253756372|ref|YP_003029512.1| prolyl-tRNA synthetase [Streptococcus suis BM407] gi|166980162|sp|A4W435|SYP_STRS2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|166980163|sp|A4VXT8|SYP_STRSY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|145690421|gb|ABP90927.1| Prolyl-tRNA synthetase [Streptococcus suis 05ZYH33] gi|145692619|gb|ABP93124.1| Prolyl-tRNA synthetase [Streptococcus suis 98HAH33] gi|251816902|emb|CAZ52551.1| prolyl-tRNA synthetase [Streptococcus suis SC84] gi|251818836|emb|CAZ56679.1| prolyl-tRNA synthetase [Streptococcus suis BM407] gi|251820685|emb|CAR47447.1| prolyl-tRNA synthetase [Streptococcus suis P1/7] gi|292559230|gb|ADE32231.1| Prolyl-tRNA synthetase [Streptococcus suis GZ1] Length = 620 Score = 196 bits (498), Expect = 7e-48, Method: Composition-based stats. Identities = 102/257 (39%), Positives = 142/257 (55%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA + SH LMLR G + Q S GIYS+LPL + ++ I+REE Sbjct: 1 MKQSKMIIPTLREMPSDASVISHALMLRAGYVRQISAGIYSYLPLANRVIEKAKNIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ AIE P L SAD+W ESGRY++YG ++ +L +R I GPTHEE +T + R Sbjct: 61 FDKIDAIEFLAPALLSADIWRESGRYETYGDDLYKLKNREGSDFILGPTHEETVTLLARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ K+RDE RPR G++R REF+MKD YSF + E +Y+ + Sbjct: 121 AVQSYKQLPLNIYQIQPKYRDEKRPRNGLLRGREFIMKDGYSFHASYESLDQTYDDYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV----LADTGETQVFCSKDFMDFPIPSEN 236 Y IF R GL+ + + G +GG S EF+ D V IP + Sbjct: 181 YEAIFTRAGLEFKAIIGDGGAMGGKDSQEFMAITPDRTDLDRWVVLDKSVASFEEIPEDV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L V Sbjct: 241 LEAFKAELLAWSVSGED 257 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 16/199 (8%) Query: 256 YAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 D+ K + P+ V RGIE+GHIF GT+YS M+A +G+ + Sbjct: 416 VTEYVDIREVKEGEPSPDGHGVLNFARGIEIGHIFKLGTRYSDSMNANILDENGRSMPII 475 Query: 314 MGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQV 360 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 476 MGCYGIGVSRLLSAVLEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLIPVNVKDEA 535 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + + I A L G +V DD E++G +F+ +DL+G P++V VG K +D VE+K Sbjct: 536 AMELTQSIEASLVGAGYEVLTDDRNERVGVKFSDSDLIGLPIRVTVGKK-AADGIVEVKI 594 Query: 421 RLTGIREDMSLEEVINYAS 439 + TG ++ +++++ Sbjct: 595 KGTGDTVEVHVDQLLETLQ 613 >gi|324989750|gb|EGC21693.1| proline--tRNA ligase [Streptococcus sanguinis SK353] Length = 616 Score = 196 bits (497), Expect = 7e-48, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 138/212 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 Y +IF R L + + G +GG S EF+ Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMA 212 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 16/200 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M+A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLKFARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPM 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEFRYAWGINFPKELAPFDVHLIPVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ++I A L G +V DD E+ G +F+ +DL+G P++V VG K ++ VE+K Sbjct: 534 DAVALTDQIEANLLSAGYEVLVDDRNERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYAS 439 + TG ++ + ++ S Sbjct: 593 IKATGDTIEVHADNLLETLS 612 >gi|291299271|ref|YP_003510549.1| prolyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728] gi|290568491|gb|ADD41456.1| prolyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728] Length = 562 Score = 196 bits (497), Expect = 7e-48, Method: Composition-based stats. Identities = 100/233 (42%), Positives = 138/233 (59%), Gaps = 1/233 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S + P L++ P +AE SH+ ++R G I Q + G YS LPL + + A+IREE Sbjct: 1 MRWSTLYAPTLRDFPAEAEAPSHQRLVRAGFIRQLAAGHYSLLPLAIRVRAKIMAVIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E +P + A++W SGR+D G EM RL DR + G THEE+ T + Sbjct: 61 LDRIGAQEFLLPAMHPAEIWHASGRWDVMGSEMFRLKDRKGAQLALGMTHEEIFT-SIAT 119 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP +YQ Q KFRDE RP+ G++R REF MKD+YSFDL G +++K + Sbjct: 120 ELNSYKQLPQIWYQFQTKFRDEPRPKGGLLRVREFTMKDSYSFDLDAAGLDAAFDKHRGA 179 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 YLRIF RLG+ +IP+ A SG +GG S EF+ A +GE V + Sbjct: 180 YLRIFERLGIPAIPVDASSGTMGGSGSTEFMSPAPSGEDLVMRCGCGYAANVE 232 Score = 157 bits (398), Expect = 3e-36, Method: Composition-based stats. Identities = 68/191 (35%), Positives = 99/191 (51%), Gaps = 4/191 (2%) Query: 256 YAATSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 D+ + ++ PE + R IEVGHIF GTKYS + A A+GK V Sbjct: 374 VGRWLDLRRAQPGEACPECGQPLEEVRTIEVGHIFKLGTKYSEVLDAKVLDANGKAVPVV 433 Query: 314 MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 MGSYGIG R +AA++E+ HD GI WP +VAP+ ++++ + D R A E +Y +LS Sbjct: 434 MGSYGIGVERAIAAIVEAHHDEAGIKWPVNVAPYTVAVVMMSTKDDEVRQAAENLYRQLS 493 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 DV DD + G++ +L+G P +V VG++ + VEI R TG E + + E Sbjct: 494 DT--DVILDDRDARPGAKLTDVELVGIPFRVTVGARGLKTGSVEITSRATGETETVPVAE 551 Query: 434 VINYASHRFSN 444 N Sbjct: 552 AAARVRDLLKN 562 >gi|15639153|ref|NP_218599.1| prolyl-tRNA synthetase [Treponema pallidum subsp. pallidum str. Nichols] gi|189025393|ref|YP_001933165.1| prolyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14] gi|6094411|sp|O83195|SYP_TREPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226701353|sp|B2S2A7|SYP_TREPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|3322426|gb|AAC65149.1| prolyl-tRNA synthetase (proS) [Treponema pallidum subsp. pallidum str. Nichols] gi|189017968|gb|ACD70586.1| prolyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14] Length = 617 Score = 196 bits (497), Expect = 7e-48, Method: Composition-based stats. Identities = 91/235 (38%), Positives = 134/235 (57%), Gaps = 1/235 (0%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 S +F P L+ P DA IASH+L++R G + + + G++++LPLG + + AIIREE Sbjct: 1 MSAFFAPTLRSAPADATIASHQLLMRAGYVRKIANGLFAYLPLGLRVRHKIEAIIREELE 60 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 G +E + P + A+LW ESGR+ G E+LR +R D +++ PT EE T + R Sbjct: 61 AIGCLECTAPVVTPAELWKESGRWYRMGAELLRAKNRLDHELLFSPTAEESFTALVRGDC 120 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY++ P + YQI K+RDE+RPR+G+MR+REF M DAYSF +Y K +Y Sbjct: 121 TSYKHFPLSLYQINAKYRDEIRPRYGLMRAREFTMADAYSFHTDCACLARTYEKFAHAYR 180 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 IF R+GL I + A G +GG S EF+V + G+ + + E Sbjct: 181 AIFRRIGLSVIAVHAHLGAMGGQESEEFMVESAVGDNTLLLCPHCT-YAANCEKA 234 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 62/188 (32%), Positives = 95/188 (50%), Gaps = 5/188 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 A +D+ + D +G E+GH+F G KY+ M TF G + MG Sbjct: 425 AVADLMLVRAGDRCIHCGAPLYEKKGNELGHLFKLGDKYTRSMHLTFTDEQGVRQFPLMG 484 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R +A+V+E+ HD +GI WP +++P+ + LI I H Q A E +Y +L Sbjct: 485 CYGIGLDRTLASVVENHHDTRGISWPLAISPYAVVLIPI-PHTQAPYAAAEALYVQLRTR 543 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V +DD E+ G +FA ADL+G PL+V++ +K + VE R + EE Sbjct: 544 GVEVLFDDRAERPGVKFADADLIGIPLRVVLSAKTLPR--VECTTRCGAHTYFFTQEEAS 601 Query: 436 NYASHRFS 443 + + Sbjct: 602 EHIARLLE 609 >gi|332365812|gb|EGJ43569.1| proline--tRNA ligase [Streptococcus sanguinis SK355] Length = 616 Score = 196 bits (497), Expect = 7e-48, Method: Composition-based stats. Identities = 97/212 (45%), Positives = 137/212 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVHD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 Y +IF R L + + G +GG S EF+ Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMA 212 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 16/200 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M+A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLKFARGIEIGHIFKLGTRYSESMNANVLDENGRAVPM 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEFRYAWGINFPKELAPFDVHLIPVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ++I A L G +V DD E+ G +F+ +DL+G P++V VG K ++ VE+K Sbjct: 534 EALALTDQIEANLLSAGYEVLVDDRNERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYAS 439 + TG ++ + ++ S Sbjct: 593 IKATGDTIEVHSDNLLETLS 612 >gi|171778813|ref|ZP_02919875.1| hypothetical protein STRINF_00734 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282459|gb|EDT47883.1| hypothetical protein STRINF_00734 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 618 Score = 196 bits (497), Expect = 8e-48, Method: Composition-based stats. Identities = 105/279 (37%), Positives = 153/279 (54%), Gaps = 4/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQSQMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLNADLWRESGRYETYGEDLYKLKNRDKSDFILGPTHEETFTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF EG +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHADYEGLDTTYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV----LADTGETQVFCSKDFMDFPIPSEN 236 Y IF R GL + + G +GG S EF+ D V IP++ Sbjct: 181 YEAIFTRAGLDFKAIIGDGGAMGGKDSQEFMAITPDRTDLDRWLVLDKSIASIDEIPADV 240 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 + + +V +T + L + E K Sbjct: 241 LEDIKKELASWLVSGEDTIAYSTESSYAANLEMASNEYK 279 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 16/199 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ K V RGIE+GHIF GT+YS M AT +G+ + Sbjct: 414 FEAEYVDIREVKEGEISPDGKGVLKFARGIEIGHIFKLGTRYSESMGATILDQNGRAIPI 473 Query: 313 QMGSYGIGAMRVVAAVIESSHD-------------GKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P +APF + +I + D+ Sbjct: 474 VMGCYGIGVSRILSAVIEQHARLFVSKTPKGAYRFAWGINFPKELAPFDVHVITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + K+ A L G +V D+ E++GS+F+ +DL+G P++V VG K +D VE+K Sbjct: 534 EAQALTAKVEAELVAKGYEVLVDNRNERVGSKFSDSDLIGLPIRVTVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYA 438 + TG +++ E +I Sbjct: 593 IKATGDTIEVNAENLIETL 611 >gi|153002179|ref|YP_001367860.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS185] gi|151366797|gb|ABS09797.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS185] Length = 398 Score = 196 bits (497), Expect = 8e-48, Method: Composition-based stats. Identities = 66/428 (15%), Positives = 135/428 (31%), Gaps = 40/428 (9%) Query: 18 AEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSA 77 + +L L + G+ W P G ++ IR R G E++ P Sbjct: 4 HREIAEQLDLF--HSEPQAPGMIFWHPNGWALFRDIQEHIRRVYRRNGFEEVNTPVFMKK 61 Query: 78 DLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 +LW SG D + + M + + + P +F+ + S+R+LP ++ Sbjct: 62 ELWQTSGHMDMFAENMFFGGGKENIDEYVLKPMSCPAHILLFKRGVHSHRDLPLRLFEFG 121 Query: 137 LKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 L R+E G +R+R+F DA+ F ++ +++ G ++ + Sbjct: 122 LVHRNESSGSLNGCLRARQFTQDDAHVFCC-WSQAEEEIRGFLQRAKQVYGDYGYHNLDV 180 Query: 196 RAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP 255 + + P S E A C + D + A Sbjct: 181 KISTKPEKALGSDEQWRRAQK-LLDSACYSEGFDAEYQA----------------GEGAF 223 Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV-QM 314 Y ++ L DS+ + + F ++ + G+ M Sbjct: 224 YGPKIEL---SLTDSMGRCWQCGTIQFD----FNLPERFD----VQYTNEQGEFERPVIM 272 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G++ ++ G W + I + ++ ++ Sbjct: 273 HQAMYGSIERWLGILLEVSQGNLPDW------LHPVPVAIASVNESNSQFVRQLATLCLA 326 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 V D + + P + VG K ++ V +K R G+ + L E+ Sbjct: 327 RDMRVLVDISQNSVARKMKRFHKQKVPYILTVGDKEEAEKCVSVKCRKDGVMTHIPLAEL 386 Query: 435 INYASHRF 442 +Y + + Sbjct: 387 ADYLADKL 394 >gi|170290551|ref|YP_001737367.1| threonyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174631|gb|ACB07684.1| threonyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8] Length = 638 Score = 196 bits (497), Expect = 8e-48, Method: Composition-based stats. Identities = 73/439 (16%), Positives = 147/439 (33%), Gaps = 32/439 (7%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 ++ + + RD + +L L + G+ W P G + + + Sbjct: 225 EFLVRREEIRKRDHRVVGPQLDLFSMPSEIIGPGLILWHPKGARVRRIIEDFLVRVHLSR 284 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + + LW SG +Y ++ + + ++ P + I+ S +S Sbjct: 285 GYELVYSPHIAYSTLWKISGHL-NYYRDYMYVFEKEGIEHAVKPMNCPFHILIYNSKRRS 343 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR LP +++ +R E G++R+R F DA+ F + Sbjct: 344 YRELPLRLFELGTVYRFEKSGVLHGLLRARGFTQDDAHIFTTREDLEDEV---------- 393 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 LGL + +L E ++ S + S Sbjct: 394 ----LGLIDLNEYLMRSFGFEELKVEISTWDPRRRSEYMGSDEDWSAAQSSLEGALRRKG 449 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I+E A Y D+ KL DS+ ++S I+ F ++ L K Sbjct: 450 YRYEIMEGEAAFYGPKIDM---KLVDSIGREWQLSTIQID----FNLPRRFDLKY---VK 499 Query: 304 GADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 ++H V + +G++ ++ + G +W + I Q Sbjct: 500 ADGSEEHIVMIHRALLGSIERFFGILLEHYAGNFPLW------IAPIQLRILPVSQAQEG 553 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 E++ A +S G + + ++L P+ I+G + + ++ ++ + Sbjct: 554 RAEELLALMSARGVRADIRKAESTLSYRIRESELEKIPIVAIIGEREMKTGEISVRVKGK 613 Query: 424 GIREDMSLEEVINYASHRF 442 G MSLE+ Sbjct: 614 GNLGSMSLEDFFRTFGKEL 632 >gi|315080595|gb|EFT52571.1| threonyl-tRNA synthetase [Propionibacterium acnes HL078PA1] Length = 689 Score = 196 bits (497), Expect = 8e-48, Method: Composition-based stats. Identities = 67/448 (14%), Positives = 129/448 (28%), Gaps = 45/448 (10%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + ++E R D +L L + + G+ + P G + + G Sbjct: 250 YQQRIKEAERRDHRKLGAELDLFS-FPEEIGPGLVVFHPKGAMLRHLIEEHVIARHMEAG 308 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHEEV 113 + P + L+ SG Y M R + + + Sbjct: 309 FNFVHTPEITKGGLFHTSGHLPYYADTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPM 368 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IFRS +SYR LP F++I +R E G+ R R F D++++ + Sbjct: 369 HNLIFRSRGRSYRELPLRFFEIGHDYRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGE 428 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 K +L I GL + + +FI + Sbjct: 429 -IKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDED-----------WQVAT 476 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y + ++ D++ ++S + Sbjct: 477 DTLDQVCRSTGLQLVPDPGGAAFYGPKV---SVQVRDAIGRTWQMSTIQYDFNQP----- 528 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + ADG + S +G++ V+ + G +W Sbjct: 529 ---ERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW------LSPVQ 579 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + + + D L G V D ++ G + A P +I G + Sbjct: 580 VRLVPVAEAFNDYVTGFAEVLGSRGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDA 639 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYAS 439 V + R + L+E + + Sbjct: 640 EAGAVSFRLRDGSQVNGVVLDEAVRIIA 667 >gi|254730107|ref|ZP_05188685.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] Length = 232 Score = 196 bits (497), Expect = 8e-48, Method: Composition-based stats. Identities = 112/231 (48%), Positives = 156/231 (67%) Query: 211 IVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDS 270 I+LA+TGE+QV+C + ++D +P +TDF + L IV +WT PYAAT ++H+E + Sbjct: 1 IILAETGESQVYCDRAYLDLAVPGADTDFRNDAQLTDIVTRWTTPYAATDEMHDEADWAK 60 Query: 271 LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIE 330 + +VSARGIEVGHIF+FGTKYS PM A +G DGK+H V MGSYGIG R+VAA IE Sbjct: 61 VKPESQVSARGIEVGHIFHFGTKYSEPMGAKVQGPDGKEHLVSMGSYGIGPSRLVAAAIE 120 Query: 331 SSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGS 390 +SHD GIIWP ++APF ++N+K D+ C EK+Y L+ G D DD E+ G+ Sbjct: 121 ASHDDAGIIWPKTIAPFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDERPGA 180 Query: 391 QFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 +FA DL+G P QVIVG + V+ +VE+K R TG R+ + ++ IN + + Sbjct: 181 KFATMDLIGLPTQVIVGPRGVAAGEVEVKDRKTGERQSLGIKAAINMLTAQ 231 >gi|325695492|gb|EGD37392.1| proline--tRNA ligase [Streptococcus sanguinis SK150] Length = 616 Score = 196 bits (497), Expect = 8e-48, Method: Composition-based stats. Identities = 103/257 (40%), Positives = 147/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV----LADTGETQVFCSKDFMDFPIPSEN 236 Y +IF R L + + G +GG S EF+ D V IP + Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMAITPDRTDVNRWVVLDKSVASFDEIPEDA 240 Query: 237 TDFDDIISLNSIVEQWT 253 + + +V Sbjct: 241 QEAIRTELTSWMVSGED 257 Score = 146 bits (368), Expect = 7e-33, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 16/200 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M+A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLKFARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPM 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEFRYAWGINFPKELAPFDVHLIPVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ++I A L G +V DD E+ G +F+ +DL+G P++V VG K ++ VE+K Sbjct: 534 EALTLTDQIEANLLSAGYEVLVDDRNERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYAS 439 + +G ++ + ++ S Sbjct: 593 IKASGDTIEVHADNLLETLS 612 >gi|269986430|gb|EEZ92716.1| threonyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 635 Score = 196 bits (497), Expect = 8e-48, Method: Composition-based stats. Identities = 73/443 (16%), Positives = 147/443 (33%), Gaps = 39/443 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L +++E D + +L L S G + G + + +E + Sbjct: 222 YLKLIEERKEHDHKKIGKELELFE--FSDLSPGSPFFTTKGTIIYNELLKFAKELDKKYD 279 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD-RNDKAMIYGPTHEEVMTDIFRSHIKS 124 E+ P + DLW SG +D Y + M R+ +D+ P + +F+S +S Sbjct: 280 YTEIITPIIAKIDLWKISGHFDKYKENMFRVTPFESDEEYGLKPMNCPFSALLFKSKTRS 339 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP R EL G++R+R D++ + + + L Sbjct: 340 YRDLPMRLSDYGFLHRYELEGTLDGLLRTRLMEQNDSHVYVTEEQIESEIIRMF--NILD 397 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 ++ M + P + D D Sbjct: 398 DTYKPFNFKPIMVLATRPEKR-----------------IGEEALWDKAEGILKGALDKKG 440 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 I E A Y D++ + + VS ++ F ++ A + Sbjct: 441 YKYEIKEGDGAFYGPKIDIYVLDFSGRVEDAYAVSTIQLD----FNLAVRFD----AKYI 492 Query: 304 GADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 G D K+H+ + +G + +I + G+ +W V +++ + Sbjct: 493 GKDNKEHFPIVIHRSIMGTIGRFMGIILENLKGELPVWLAPVQVKVLTIT------ERNN 546 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 + E I +L D + + A L P +++G K + +++R Sbjct: 547 EYAEGIIKKLKDNNIREESDIENGTLDYKIRKAQLEKIPFIIVIGDKEEEKKTIAVRNRK 606 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 R ++ ++E I + +N Sbjct: 607 GKTRYNVDIDEFIKNLLNDINNK 629 >gi|222152444|ref|YP_002561619.1| prolyl-tRNA synthetase [Streptococcus uberis 0140J] gi|254782919|sp|B9DTD1|SYP_STRU0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|222113255|emb|CAR40772.1| prolyl-tRNA synthetase [Streptococcus uberis 0140J] Length = 618 Score = 196 bits (497), Expect = 8e-48, Method: Composition-based stats. Identities = 101/242 (41%), Positives = 147/242 (60%), Gaps = 2/242 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ + I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMMRAGYVRQVSAGIYAYLPLANRTIEKLKTIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L +ADLW ESGRY++YG ++ +L +R I GPTHEE T + R Sbjct: 61 FDKIGAVEMLAPALLTADLWRESGRYETYGDDLYKLKNRESSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQAKYRDEKRPRNGLLRTREFIMKDGYSFHQNYEDLDVTYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL+ + + G +GG S EF+ + E +D IPS + + Sbjct: 181 YEAIFTRSGLEFKGIIGDGGAMGGKDSQEFMAITP--ERTDLNRWLVLDKSIPSLSDIPE 238 Query: 241 DI 242 D+ Sbjct: 239 DV 240 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 102/199 (51%), Gaps = 16/199 (8%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K ++ P+ ARGIEVGHIF GT+YS + A +GK + Sbjct: 414 FKAEFVDIREVKEGEASPDGHGHLQFARGIEVGHIFKLGTRYSDSLGANILDENGKSIPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P +APF I LI + D+ Sbjct: 474 VMGCYGIGVSRILSAVIEQHARLFVSKTPKGEYRYSWGINFPKELAPFDIHLITVNTKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + +K+ L G +V DD E++GS+F+ +DL+G P+++ VG K S+ VEIK Sbjct: 534 EAQTLTDKLEKELMTKGYEVLTDDRNERVGSKFSDSDLIGLPIRITVGKK-ASEGIVEIK 592 Query: 420 HRLTGIREDMSLEEVINYA 438 + +G +++ E VI Sbjct: 593 IKASGDSIEVNAENVIETL 611 >gi|332365115|gb|EGJ42878.1| proline--tRNA ligase [Streptococcus sanguinis SK1059] Length = 616 Score = 196 bits (497), Expect = 8e-48, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 138/212 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 Y +IF R L + + G +GG S EF+ Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMA 212 Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 16/200 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M+A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLKFARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPM 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEFRYAWGINFPKELAPFDVHLIPVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ++I A L G +V DD E+ G +F+ +DL+G P++V VG K ++ VE+K Sbjct: 534 DAVALTDQIEANLLSAGYEVLVDDRNERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYAS 439 + TG ++ + ++ S Sbjct: 593 IKATGDTIEVHADNLLETLS 612 >gi|328944571|gb|EGG38732.1| proline--tRNA ligase [Streptococcus sanguinis SK1087] Length = 616 Score = 196 bits (497), Expect = 8e-48, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 138/212 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 Y +IF R L + + G +GG S EF+ Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMA 212 Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 16/200 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M+A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLKFARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPM 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEFRYAWGINFPKELAPFDVHLIPVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ++I A L G +V DD E+ G +F+ +DL+G P++V VG K ++ VE+K Sbjct: 534 DAVALTDQIEANLLSAGYEVLVDDRNERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYAS 439 + TG ++ + ++ S Sbjct: 593 IKATGDTIEVHADNLLETLS 612 >gi|262283493|ref|ZP_06061259.1| prolyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA] gi|262260984|gb|EEY79684.1| prolyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA] Length = 616 Score = 196 bits (497), Expect = 9e-48, Method: Composition-based stats. Identities = 108/394 (27%), Positives = 181/394 (45%), Gaps = 19/394 (4%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH L+LR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALLLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SADLW ESGRY++YG ++ +L +R I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLSADLWRESGRYETYGDDLFKLKNREGSDFILGPTHEETFTALVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVTYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA------DTGETQVFCSKDFMDFPIPS 234 Y +IF R + + + G +GG S EF+ + D + P Sbjct: 181 YEKIFTRSEIDFKAIIGDGGAMGGKDSQEFMAITPDRTDLDRWLVLDKSVASLDEIPAGV 240 Query: 235 ENTDFDDIISLNSIVEQWTAP-----YAATSDVHNEKLFDS--------LPENKRVSARG 281 ++ + E A YAA ++ + S L + + + Sbjct: 241 LEAIKAELSNWMVSGEDTIAYSSESSYAANLEMATNEYKPSNCVVAETELVRVETPNCKT 300 Query: 282 IEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWP 341 I+ F ++ + + + + +G+ + +++ + + Sbjct: 301 IDEVAAFLQVSEEQTIKTLVYIADEKPVVALLVGNDQLNEVKLKNHLGADFFEAATEAEV 360 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 + + + ++ LS Sbjct: 361 QELFGANFGSLGPVNLPEEVTIIADRKVQDLSNA 394 Score = 146 bits (369), Expect = 6e-33, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 16/200 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ V RGIE+GHIF GT+YS M+AT +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGNGVLKFARGIEIGHIFKLGTRYSDSMNATVLDENGRAVPL 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 VMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLIPVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +KI L G +V DD E++G +F+ +DL+G P++V VG K ++ VE+K Sbjct: 534 ESLALTDKIEESLVGAGYEVLVDDRNERVGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYAS 439 + +G ++ + +I S Sbjct: 593 IKASGDTIEVHADNLIETLS 612 >gi|15675760|ref|NP_269934.1| prolyl-tRNA synthetase [Streptococcus pyogenes M1 GAS] gi|71911486|ref|YP_283036.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS5005] gi|81856026|sp|Q99XY4|SYP_STRP1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|13622982|gb|AAK34655.1| putative prolyl-tRNA synthetase [Streptococcus pyogenes M1 GAS] gi|71854268|gb|AAZ52291.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS5005] Length = 618 Score = 196 bits (497), Expect = 9e-48, Method: Composition-based stats. Identities = 109/307 (35%), Positives = 159/307 (51%), Gaps = 19/307 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQSKLLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R++ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHHNYEDLDVTYEDYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA------DTGETQVFCSKDFMDFPIPS 234 Y IF R GL + + G +GG S EF+ + D D P Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAITPARTDLDRWVVLDKSIASMDDIPKEV 240 Query: 235 ENTDFDDIISLNSIVEQWTAP-----YAATSDVHN--------EKLFDSLPENKRVSARG 281 ++ + E A YAA ++ D+L E + + Sbjct: 241 LEDIKAELAAWMISGEDTIAYSTESSYAANLEMATNEYKPSSKVAAEDALAEVETPHCKT 300 Query: 282 IEVGHIF 288 I+ F Sbjct: 301 IDEVAAF 307 Score = 142 bits (359), Expect = 8e-32, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 104/199 (52%), Gaps = 16/199 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ V RGIEVGHIF GT+YS M AT +G+ + Sbjct: 414 FQAEYVDIREVKEGEMSPDGHGVLQFARGIEVGHIFKLGTRYSDSMGATILDENGRTVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P +APF + LI + DQ Sbjct: 474 VMGCYGIGVSRILSAVIEQHARLFVNKTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQ 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 V +D K+ A L G DV DD E++GS+F+ +DL+G P++V VG K ++ VEIK Sbjct: 534 VAQDLTAKLEADLMAKGYDVLTDDRNERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIK 592 Query: 420 HRLTGIREDMSLEEVINYA 438 + TG +++ E +I Sbjct: 593 IKATGDSIEVNAENLIETL 611 >gi|319940262|ref|ZP_08014614.1| prolyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV] gi|319810564|gb|EFW06900.1| prolyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV] Length = 619 Score = 196 bits (497), Expect = 9e-48, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 136/212 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ V I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQISAGVYSYLPLANRVIEKVKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SADLW ESGRYD+YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSADLWRESGRYDTYGEDLYKLKNREGSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQAKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 Y IF R + + + G +GG S EF+ Sbjct: 181 YENIFTRSEVDFKGIIGDGGAMGGKDSQEFMA 212 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 16/207 (7%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M+AT +G+ V Sbjct: 414 FTAEYVDIREVREREVSPDGQGVLKFARGIEIGHIFKLGTRYSESMNATVLDENGRAVPV 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 VMGCYGIGVSRLLSAVMEQHARLFVNKTPKGDYRYAWGINFPKELAPFDVHLIPVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 E++ A L K G +V DD E+ G +F+ +DL+G P++V +G K +D VE+K Sbjct: 534 EALALTEQLEAELLKAGYEVLTDDRNERAGVKFSDSDLIGLPIRVTIGKK-AADRIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ ++ ++ + ++ Sbjct: 593 IKATGDTIEVHVDNLLETLAILTKEDK 619 >gi|323350534|ref|ZP_08086196.1| proline--tRNA ligase [Streptococcus sanguinis VMC66] gi|322123216|gb|EFX94901.1| proline--tRNA ligase [Streptococcus sanguinis VMC66] Length = 616 Score = 196 bits (497), Expect = 9e-48, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 138/212 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 Y +IF R L + + G +GG S EF+ Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMA 212 Score = 146 bits (368), Expect = 8e-33, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 16/200 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M+A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLKFARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPM 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEFRYAWGINFPKELAPFDVHLIPVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ++I A L G +V DD E+ G +F+ +DL+G P++V VG K ++ VE+K Sbjct: 534 EALALTDQIEANLLSSGYEVLVDDRNERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYAS 439 + TG ++ + ++ S Sbjct: 593 IKATGDTIEVHADNLLETLS 612 >gi|306832697|ref|ZP_07465834.1| proline--tRNA ligase [Streptococcus bovis ATCC 700338] gi|304425153|gb|EFM28282.1| proline--tRNA ligase [Streptococcus bovis ATCC 700338] Length = 618 Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats. Identities = 106/279 (37%), Positives = 154/279 (55%), Gaps = 4/279 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ AI+REE Sbjct: 1 MKQSQMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKAIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLNADLWRESGRYETYGEDLYKLKNRDKSDFILGPTHEETFTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF EG +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHADYEGLDTTYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV----LADTGETQVFCSKDFMDFPIPSEN 236 Y IF R GL + + G +GG S EF+ D V IP++ Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAITPDRTDLDRWLVLDKSIASIDEIPADV 240 Query: 237 TDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENK 275 + + +V +T + L + E K Sbjct: 241 LEDIKKELASWLVSGEDTIAYSTESSYAANLEMASNEYK 279 Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 103/199 (51%), Gaps = 16/199 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ K V RGIE+GHIF GT+YS M AT +G+ + Sbjct: 414 FEAEYVDIREVKEGEISPDGKGVLKFARGIEIGHIFKLGTRYSESMGATILDQNGRAIPI 473 Query: 313 QMGSYGIGAMRVVAAVIESSHD-------------GKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P +APF + +I + D+ Sbjct: 474 IMGCYGIGVSRILSAVIEQHARLFVSKTPKGAYRFAWGINFPKELAPFDVHVITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + K+ A L G +V DD E++GS+F+ +DL+G P++V VG K +D VE+K Sbjct: 534 EAQALTAKVEAELVAKGYEVLVDDRNERVGSKFSDSDLIGLPIRVTVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYA 438 + TG +++ E +I Sbjct: 593 IKATGDTIEVNAENLIETL 611 >gi|261839095|gb|ACX98860.1| prolyl-tRNA synthetase [Helicobacter pylori 52] Length = 577 Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats. Identities = 101/235 (42%), Positives = 136/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + M + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNMQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I LGL + A+SG IGG S EF+VL + GE + K+ D+ E Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKNC-DYAANIE 234 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 89/173 (51%), Gaps = 2/173 (1%) Query: 260 SDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P + + +EVGHIF G Y+ + A+F +GK+ + +MG Y Sbjct: 390 ADIVQVKESDHCPNCQGELKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E D G +W + APF + ++ D+ + ++Y RL + G Sbjct: 450 GIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMS 430 DV DD + G++ +L+G L +I+G + + + + E R ++ + Sbjct: 510 DVLLDDRDARFGAKMRDFELIGERLALIIGKQTLENKEFECIKRANLEKQTLK 562 >gi|332359309|gb|EGJ37130.1| proline--tRNA ligase [Streptococcus sanguinis SK49] Length = 616 Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 138/212 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 Y +IF R L + + G +GG S EF+ Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMA 212 Score = 146 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 16/200 (8%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + ARGIE+GHIF GT+YS M+A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGILKFARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPL 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEFRYAWGINFPKELAPFDVHLIPVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ++I A L G +V DD E+ G +F+ +DL+G P++V VG K ++ VE+K Sbjct: 534 EAVTLTDQIEANLLSAGYEVLVDDRNERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYAS 439 + TG ++ + ++ S Sbjct: 593 IKATGDTIEVHADNLLETLS 612 >gi|325686585|gb|EGD28611.1| proline--tRNA ligase [Streptococcus sanguinis SK72] gi|325697433|gb|EGD39319.1| proline--tRNA ligase [Streptococcus sanguinis SK160] Length = 616 Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 138/212 (65%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKTKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FDKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 Y +IF R L + + G +GG S EF+ Sbjct: 181 YEKIFTRSELDFKAIIGDGGAMGGKDSQEFMA 212 Score = 147 bits (370), Expect = 5e-33, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 16/200 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M+A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLKFARGIEIGHIFKLGTRYSDSMNANVLDENGRAVPM 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEFRYAWGINFPKELAPFDVHLIPVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ++I A L G +V DD E+ G +F+ +DL+G P++V VG K ++ VE+K Sbjct: 534 KALALTDQIEANLLSAGYEVLVDDRNERAGVKFSDSDLIGLPIRVTVGKK-AAEGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYAS 439 + TG ++ + ++ S Sbjct: 593 IKATGDTIEVHADNLLETLS 612 >gi|255730209|ref|XP_002550029.1| threonyl-tRNA synthetase, mitochondrial precursor [Candida tropicalis MYA-3404] gi|240131986|gb|EER31544.1| threonyl-tRNA synthetase, mitochondrial precursor [Candida tropicalis MYA-3404] Length = 455 Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats. Identities = 76/461 (16%), Positives = 152/461 (32%), Gaps = 67/461 (14%) Query: 16 RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQ 75 + I++ +L+ T S G +LP G + L+ + ++ +Q + G E+ P + Sbjct: 32 SNHAISTKQLLYTT---DPVSPGSIFFLPHGTRILNKLIQFMKNQQTKYGFQEVITPLIF 88 Query: 76 SADLWVESGRYDSYGKEMLR-----------LADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 LW +SG +D+Y +M + + + P + IF +S Sbjct: 89 KTKLWKKSGHWDNYKDDMFKVVGNDLSKEEHTDNIEEHEYGLKPMNCPSHCMIFAKFDRS 148 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 Y+ LP + R+E G+ R R F D + F + + Sbjct: 149 YQELPIRYSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCSMSQIDQE-IKNTLTLIKD 207 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + G+ I + P E + + + + Sbjct: 208 TYKVFGIDDIEFYLSTRP----------------EEKYIGDIETWNKAEDQLKNVLNSTA 251 Query: 244 SLNSI--VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSAT 301 E A Y DV L D+ + +V ++ F ++ Sbjct: 252 GEGQWSIREGDGAFYGPKIDVL---LKDAFGKKHQVGTIQLD----FQLPNRF----ELK 300 Query: 302 FKGADGK--DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 + G DG + + G++ A++ D WP + P + +I I + Sbjct: 301 YVGEDGNRDHQPILVHRAVYGSLERFFAILL---DHYQGKWPFWINPRQAIIIPIN---E 354 Query: 360 VCRDACEKIYAR--------------LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405 A E + + L+ V D GE IG++ A G+ ++ Sbjct: 355 SHVQAAESLQQKLGGDLLNSDESIAPLTSYNFYVDIDKRGETIGARTKEAIQKGYSYIIL 414 Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 +G K +++ ++ R ++M+ EE+ + + Sbjct: 415 IGDKEITNGTFAVRTRDDRKVKNMTSEEIYDLFVQLEKTYK 455 >gi|238879230|gb|EEQ42868.1| threonyl-tRNA synthetase, mitochondrial precursor [Candida albicans WO-1] Length = 455 Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats. Identities = 78/475 (16%), Positives = 157/475 (33%), Gaps = 72/475 (15%) Query: 7 FLPI-LQEN----PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 FL +E + I+S +L+ T S G +LP G + L+ + ++ +Q Sbjct: 18 FLSTKTKEAESSTQSNHVISSKQLLYTT---DPTSPGSIFFLPHGTRILNKLIQFMKNQQ 74 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR-----------LADRNDKAMIYGPTH 110 + G E+ P + LW +SG +D+Y +M + + + P + Sbjct: 75 TKYGFQEVVTPLIFKTKLWKKSGHWDNYKDDMFKVVGNDITKEEYTDNIEEHEYGLKPMN 134 Query: 111 EEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEG 169 IF +SY+ LP + R+E G+ R R F D + F + Sbjct: 135 CPSHCMIFAKFDRSYQELPVRYSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCSMDQI 194 Query: 170 SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMD 229 ++ G+ I + P E + + D Sbjct: 195 DGE-IKNTLELIKDTYNVFGINEIEFYLSTRP----------------EDKFIGEIETWD 237 Query: 230 FPIPSENTDFDDIISLNSIV--EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 + + E A Y DV L D+ + +V ++ Sbjct: 238 IAESQLKNVLNSTAGEGNWATREGDGAFYGPKIDVL---LKDAFNKKHQVGTIQLD---- 290 Query: 288 FYFGTKYSLPMSATFKGADG--KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 F ++ + G DG + + G++ A++ D WP + Sbjct: 291 FQLPNRF----ELKYVGEDGKRDHQPILVHRAVFGSLERFFAILL---DHYQGKWPFWIN 343 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLS--------------KVGCDVFWDDMGEQIGSQ 391 P + ++ I + E++ +LS V D GE +G++ Sbjct: 344 PRQALIVPIN---ESHVPVAEELQKKLSGDIVSCDNAIAPLTGFNFHVDIDKRGETVGAR 400 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 A G+ +++G K +++ ++ R ++M+ +E+ + + Sbjct: 401 TKDAIQKGYSYLIMIGDKDIANGTFAVRSRDDRKIKNMTSDEIYKMFIALEQSYK 455 >gi|328773873|gb|EGF83910.1| hypothetical protein BATDEDRAFT_18299 [Batrachochytrium dendrobatidis JAM81] Length = 706 Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats. Identities = 65/440 (14%), Positives = 132/440 (30%), Gaps = 41/440 (9%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 + RD + L + S G +LP G + + + + R E + G E+ Sbjct: 297 EEAEKRDHRKIGTEQELF--FFNDFSPGSAFFLPHGTRIYNTLIDLQRSEYRKRGFHEVV 354 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPF 130 P + + LW SG + +Y ++M D + P + IF++ +SYR LP Sbjct: 355 TPNMYNTKLWERSGHWANYHEDMF-ALDVEKEKFALKPMNCPGHCLIFKNRDRSYRELPL 413 Query: 131 TFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLG 189 + R+E G+ R R F DA+ F + I+ G Sbjct: 414 RLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCRLDQIGTEM-EGCLDFLKHIYSIFG 472 Query: 190 LKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIV 249 ++ + P D + S S+ Sbjct: 473 FTF-ELKLSTRPENF-----------------LGEIATWDQAEKLLEEALNKFGSTWSLN 514 Query: 250 EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKD 309 E A Y D+ + D+L + + ++ F ++ L Sbjct: 515 EGDGAFYGPKIDI---VISDALRRRHQCATIQLD----FQLPDRFELEYRTDDPANQFSR 567 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 + + R++A + E+ + + K+ Sbjct: 568 PVMIHRAILGSVERMIAILTENFAGKWPFWLSPRQVIVVPIAVPFN-------EYATKVA 620 Query: 370 ARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL---TGIR 426 +L G D + + A++ + +VG + V ++R + + Sbjct: 621 NQLYAAGLYAEADVSDLTLKKKIRNAEIAQWNFIFVVGEEEEKSDSVNCRNRDDPLSKNK 680 Query: 427 ED-MSLEEVINYASHRFSNN 445 +S++E+ + Sbjct: 681 GVCVSVQEIQGKLIKIQDSR 700 >gi|308063100|gb|ADO04987.1| prolyl-tRNA synthetase [Helicobacter pylori Sat464] Length = 577 Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats. Identities = 100/235 (42%), Positives = 135/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIASN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I LGL + A+SG IGG S EF+VL + GE + K+ D+ E Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKNC-DYAANIE 234 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P + + +EVGHIF G Y+ + A+F + K+ + +MG Y Sbjct: 390 ADIVQVKESDHCPNCQGALKYHKSLEVGHIFKLGQGYAKSLKASFLDKNAKERFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E D G +W + APF + ++ D + ++Y RL + G Sbjct: 450 GIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDGAQKKLAFEVYERLLQKGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D DD + G++ +L+G L +IVG + + + E R ++ + E+ Sbjct: 510 DALLDDRDARFGAKMRDFELIGERLALIVGKQTLESKEFECIKRANLEKQTLKDIELEEK 569 Query: 438 ASHRFSN 444 + Sbjct: 570 ILEMLES 576 >gi|284931186|gb|ADC31124.1| threonyl-tRNA synthetase [Mycoplasma gallisepticum str. F] Length = 573 Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats. Identities = 73/439 (16%), Positives = 139/439 (31%), Gaps = 34/439 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L I++E RD + L L T G+ WLP GQ + + Q + G Sbjct: 163 YLEIIEEQKQRDHRRINKILELFT-FNQLAGPGMPIWLPNGQIVRQLIGDYVHSVQKKFG 221 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHIKS 124 + ++ P L + DL+ +SG Y+ Y K+M D M+ P ++ + ++ Sbjct: 222 FMAVNTPILGNVDLYKKSGHYNHYAKDMFPELALLDGDKMMLRPMTCPHHCLVYLNKPRN 281 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 Y +LP + L R E G+ R R + D + F + + Sbjct: 282 YYDLPMRLSEDALLHRYEASGGLTGLERVRAMTLLDNHIFCRLDQIKTE-ILNAYQVIKE 340 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + LK + S ++ D+ Sbjct: 341 VIGTFNLKFHRIDLSLHDPNDKQSF-------------IDNEQMWARSENQLEDALKDLG 387 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y D ++ +L + VS ++ F ++ +K Sbjct: 388 LEYTKQVGEAAFYGPKIDF---QVKTALNKIITVSTIQLD----FSLPSE--EKFDIKYK 438 Query: 304 GADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 D V + IG A + G +W + I ++ V Sbjct: 439 TKDNTYEQGVIIHLGIIGTYERFVATLLEQTKGALDLWLA-----PKQAVIIPVNNSVHL 493 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD-SKVEIKHR 421 + C ++ +L V D E++ + + P+Q+IVG + + + + Sbjct: 494 EGCNQLLEKLLAKDLRVTVDSRDERLNKKIRDHQVNKIPVQIIVGDNELKNPDLITYRLY 553 Query: 422 LTGIREDMSLEEVINYASH 440 + L + I Sbjct: 554 GQEDSNQLELTKFIELFKK 572 >gi|325263251|ref|ZP_08129986.1| threonine--tRNA ligase [Clostridium sp. D5] gi|324031644|gb|EGB92924.1| threonine--tRNA ligase [Clostridium sp. D5] Length = 653 Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats. Identities = 70/449 (15%), Positives = 148/449 (32%), Gaps = 38/449 (8%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 ++Y + + RD ++ L T + +G+ +P G K + + I +E++ Sbjct: 226 LNEYLQYLEEVKKRDHNKLGREMELFTT-VDVIGQGLPLLMPKGAKIIQTLQRWIEDEED 284 Query: 63 RT-GAIEMSVPTLQSADLWVESGRYDSYGKEMLR--LADRNDKAMIYGPTHEEVMTDIFR 119 G I P + +DL+ SG +D Y M + N + P +++ Sbjct: 285 NNWGYIRTKTPLMAKSDLYQISGHWDHYKDGMFVLGDEETNKEVFALRPMTCPFQYYVYK 344 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + KSYR+LP + + FR+E G+ R R+F + + + + + + Sbjct: 345 ASQKSYRDLPLRYSETSTLFRNEDSGEMHGLTRVRQFTISEGHLIVRPDQMVEE-FKGCL 403 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE-NT 237 + LGL+ D + D T+ + + Sbjct: 404 ALAKKCLTTLGLQ-------------DDVTYHLSKWDPDNTEKYIGDAEVWNETEGHIRN 450 Query: 238 DFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLP 297 ++ A Y D++ + ++ + + + F Sbjct: 451 ILTELEVPFVEDAGEAAFYGPKVDINAKNVY---GKEDTMITIQWDALLAEQFD------ 501 Query: 298 MSATFKGADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA 356 + +G + IG A + + ++P + P ++ ++ + Sbjct: 502 --MYYIDQNGDKVRPYIIHRTSIGCYERTLAWLI---EKYAGMFPTWLCPEQVRILPVSD 556 Query: 357 HDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKV 416 D +K+ + D E+IG + A L P +IVG K ++ V Sbjct: 557 K---YLDYADKVENEMKANNILCTVDSRSEKIGYKIREARLAKIPYMLIVGEKEEAEGTV 613 Query: 417 EIKHRLTGIREDMSLEEVINYASHRFSNN 445 ++ R G L+ I+ Sbjct: 614 SVRSRFLGDEGAKGLQGFIDDVCREIRTK 642 >gi|317179366|dbj|BAJ57154.1| prolyl-tRNA synthetase [Helicobacter pylori F30] Length = 577 Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats. Identities = 100/235 (42%), Positives = 134/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWERSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I LGL + A+SG IGG S EF+VL + GE + K+ D+ E Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKNC-DYAANIE 234 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P + + +EVGHIF G Y+ + A+F +GK+ + +MG Y Sbjct: 390 ADIVQVKESDHCPNCQGALKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E D G +W + APF + ++ D+ + ++Y RL + G Sbjct: 450 GIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D DD + G++ +L+G L +IVG + + + E R ++ + E+ Sbjct: 510 DALLDDRDARFGAKMRDFELIGERLVLIVGKQTLESKEFECIKRANLEKQVLKDTELEEK 569 Query: 438 ASHRFSN 444 + Sbjct: 570 ILEMLES 576 >gi|189091896|ref|XP_001929781.1| hypothetical protein [Podospora anserina S mat+] gi|27803058|emb|CAD60761.1| unnamed protein product [Podospora anserina] gi|188219301|emb|CAP49281.1| unnamed protein product [Podospora anserina S mat+] Length = 783 Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats. Identities = 81/477 (16%), Positives = 153/477 (32%), Gaps = 65/477 (13%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD + + L + S G WLP G + + + I+EE G E+ Sbjct: 311 LEEAAKRDHRLIGKQQELF--YFEECSPGSAMWLPHGMRIHNAIMDYIKEEYWARGYDEV 368 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P + + LW +SG Y ++M L D + + P + +FR +S++ LP Sbjct: 369 MTPNMFNVSLWEQSGHLAHYKEDMF-LLDVDKEQFGLKPMNCPAHAMMFRHRERSHKELP 427 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 + R+E G+ R R F DA+ F + K +F + + L Sbjct: 428 LRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCR-EDQIKEEVADLFDFMRKFYGIL 486 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 GL ++ + P E A++ + + D + Sbjct: 487 GLTFK-LKLSTRPEKFLGEIETWDRAES----------RLKEALDEFAASDKDGGVSWEL 535 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYS------------- 295 A Y D+ + D L + + ++ F +Y Sbjct: 536 NPGDGAFYGPKIDI---AVLDCLNRPWQCATIQLDFQQPQNFSLEYQTGEAVHKGETKAA 592 Query: 296 -----------------------LPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESS 332 P+ + G V + G++ A++ Sbjct: 593 VEEPAPPAPEAEAEKDKDGKEKKKPLLIKKALSPGCARPVMIHRAMAGSIERFTAILA-- 650 Query: 333 HDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQF 392 + WP ++P ++ +I + D +++ A L K D G + + Sbjct: 651 -EHFAGKWPFWMSPRQVIVIPVGMG---FLDYAKEVAALLKKEKFYADVDSSGNTLQKKI 706 Query: 393 AVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED----MSLEEVINYASHRFSNN 445 L + +VG + + KV I++R + L+E I SN Sbjct: 707 RNGQLAQYNFVFVVGDDEMRNRKVNIRYRDDTSTQARDVPFDLDEAIQKLRQLKSNR 763 >gi|297379463|gb|ADI34350.1| prolyl-tRNA synthetase [Helicobacter pylori v225d] Length = 577 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 100/235 (42%), Positives = 135/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I LGL + A+SG IGG S EF+VL + GE + K+ D+ E Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKNC-DYAANIE 234 Score = 139 bits (351), Expect = 7e-31, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P + + +EVGHIF G Y+ + A+F +GK+ + +MG Y Sbjct: 390 ADIVQVKESDHCPNCQGALKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++ ++E D G +W + APF + ++ D+ + ++Y RL + G Sbjct: 450 GIGISRLLSTILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D DD + G++ +L+G L +IVG + + + E R ++ + E+ Sbjct: 510 DALLDDRDARFGAKMRDFELIGERLALIVGKQTLESKEFECIKRANLEKQTLKDTELEEK 569 Query: 438 ASHRFSN 444 + Sbjct: 570 ILEMLES 576 >gi|108562666|ref|YP_626982.1| prolyl-tRNA synthetase [Helicobacter pylori HPAG1] gi|123373844|sp|Q1CUR4|SYP_HELPH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|107836439|gb|ABF84308.1| prolyl-tRNA synthetase [Helicobacter pylori HPAG1] Length = 577 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 100/235 (42%), Positives = 136/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I + LGL + A+SG IGG S EF+VL + GE + K+ D+ E Sbjct: 181 YKEILNDLGLDFRIVEADSGAIGGSKSKEFVVLTECGEDTIVVCKNC-DYAANIE 234 Score = 140 bits (352), Expect = 6e-31, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 92/187 (49%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P + + +EVGHIF G Y+ + A+F +GK+ + +MG Y Sbjct: 390 ADIVQVKESDHCPNCQGALKYHKSLEVGHIFKLGQGYAKSLRASFLDKNGKEQFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E D G +W + APF + ++ D+ + ++Y RL + G Sbjct: 450 GIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D DD + G++ +L+G L +I+G + + + + E R ++ + E+ Sbjct: 510 DALLDDRDARFGAKMRDFELIGERLALIIGKQTLENKEFECIKRANLEKQTIKDIELEEK 569 Query: 438 ASHRFSN 444 ++ Sbjct: 570 ILEMLAS 576 >gi|307636931|gb|ADN79381.1| prolyl tRNA synthetase [Helicobacter pylori 908] gi|325995521|gb|ADZ50926.1| Prolyl-tRNA synthetase [Helicobacter pylori 2018] gi|325997119|gb|ADZ49327.1| Prolyl-tRNA synthetase [Helicobacter pylori 2017] Length = 577 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 99/235 (42%), Positives = 135/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDTESLDKEFLNTQNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I LGL + A+SG IGG S EF+VL + GE + ++ D+ E Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCQNC-DYAANIE 234 Score = 139 bits (350), Expect = 9e-31, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 92/187 (49%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P + + +EVGHIF G Y+ + A+F +GK+ + +MG Y Sbjct: 390 ADIVQVKESDRCPNCQGALKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E D G +W + APF + ++ D+ + ++Y RL + G Sbjct: 450 GIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNLKDEAQKKLAFEVYERLLQKGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 DV DD + G++ +L+G L +I+G + + + E R ++ + E+ Sbjct: 510 DVLLDDRDARFGAKMRDFELIGERLALIIGKQTLESKEFECIKRANLEKQTIKDIELEEK 569 Query: 438 ASHRFSN 444 ++ Sbjct: 570 ILEMLAS 576 >gi|329117585|ref|ZP_08246302.1| proline--tRNA ligase [Streptococcus parauberis NCFD 2020] gi|326907990|gb|EGE54904.1| proline--tRNA ligase [Streptococcus parauberis NCFD 2020] Length = 618 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 101/242 (41%), Positives = 146/242 (60%), Gaps = 2/242 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L +ADLW ESGRY++YG ++ +L +R+ I GPTHEE T + R Sbjct: 61 FDKIGAVEMLSPALLTADLWRESGRYETYGDDLYKLKNRDQSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHPDYEDLDIAYEDYRRA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL + + G +GG S EF+ + E +D IPS + + Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAITP--ERTDLDRWLVLDKSIPSVDEIPE 238 Query: 241 DI 242 D+ Sbjct: 239 DV 240 Score = 136 bits (342), Expect = 9e-30, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 101/199 (50%), Gaps = 16/199 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ V RGIE+GHIF GT+YS + AT +G+ + Sbjct: 414 FQAEYVDIREVKEGEISPDGHGVLQFARGIEIGHIFKLGTRYSDSLGATILDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESSHD-------------GKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P +APF + LI + DQ Sbjct: 474 VMGCYGIGVSRILSAVIEQHARLFVSKTPKGDYRFAWGINFPKELAPFDVHLITVNTKDQ 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 ++ +I L G +V DD E++GS+F+ +DL+G P++V VG K S+ VEIK Sbjct: 534 EAQELTNRIETDLMAKGYEVLTDDRNERVGSKFSDSDLIGLPIRVTVGKK-ASEGIVEIK 592 Query: 420 HRLTGIREDMSLEEVINYA 438 + +G +++ E + Sbjct: 593 IKSSGASIEVNAENLTETL 611 >gi|222823773|ref|YP_002575347.1| prolyl-tRNA synthetase [Campylobacter lari RM2100] gi|254782892|sp|B9KGB1|SYP_CAMLR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|222538995|gb|ACM64096.1| prolyl-tRNA synthetase [Campylobacter lari RM2100] Length = 565 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 110/273 (40%), Positives = 157/273 (57%), Gaps = 4/273 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ SK++ +ENP+DA + SH +++ I Q G+Y++LPLG++ LD + II+EE Sbjct: 1 MKFSKFYAISTKENPKDATLPSHIFLVKGAFIEQIGSGLYNFLPLGKRVLDKIKNIIKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+E+++ A+LW ESGR++ +GKE+LR DR + + GPTHEE M + R+ Sbjct: 61 MDKAGALEVNLSFNTPAELWKESGRFNVFGKELLRFKDRKENDFVLGPTHEEAMVALIRN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP YQI LKFRDE RPRFG++R REFLMKD YSF + +N M + Sbjct: 121 KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHASEADLDKEFNLMHET 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y +I RLGL + A+SG IGG S EF+VLA GE + + D+ E Sbjct: 181 YSKILTRLGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILLCEHC-DYAANIEAA--- 236 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPE 273 E+ A +A N K + L E Sbjct: 237 KRTKKTCTDERPEADFATQFHTPNVKTIEELAE 269 Score = 143 bits (361), Expect = 5e-32, Method: Composition-based stats. Identities = 64/184 (34%), Positives = 100/184 (54%), Gaps = 5/184 (2%) Query: 261 DVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYG 318 D+ K D P+ K ++GIEVGHIF G KYS M+A++ +GK + MG YG Sbjct: 385 DLAAVKEHDLCPKCQHKLKQSKGIEVGHIFKLGKKYSQAMNASYLDENGKAQFFTMGCYG 444 Query: 319 IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCD 378 +G R+VA IE+SHD KG IW ++APF + +I D + E+IY Sbjct: 445 MGVSRLVAVAIEASHDEKGCIWNKTLAPFVLDIIVSNIKDIKAMEFAEQIYTHFKDKEI- 503 Query: 379 VFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 +DD E+ G + +L+GFP +++G K + + +VE+ HR T ++ + +EVI++ Sbjct: 504 -LFDDRNERFGVKINDFELMGFPYALVIG-KSLENDEVELIHRNTLEKQVLKTQEVISHL 561 Query: 439 SHRF 442 Sbjct: 562 EKIL 565 >gi|315586236|gb|ADU40617.1| proline--tRNA ligase [Helicobacter pylori 35A] Length = 577 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 100/235 (42%), Positives = 135/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I LGL + A+SG IGG S EF+VL + GE + K+ D+ E Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKNC-DYAANIE 234 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P + + +EVGHIF G Y+ + A+F +GK+ + +MG Y Sbjct: 390 ADIVQVKESDHCPNCQGALKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E D G +W + APF + ++ D+ + ++Y RL + G Sbjct: 450 GIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D DD + G++ +L+G L +I+G + + + E R ++ + E+ Sbjct: 510 DALLDDRDARFGAKMRDFELIGERLALIIGKQTLESKEFECIKRANLEKQTLKDTELEEK 569 Query: 438 ASHRFSN 444 + Sbjct: 570 ILEMLES 576 >gi|160876899|ref|YP_001556215.1| tRNA synthetase class II [Shewanella baltica OS195] gi|160862421|gb|ABX50955.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS195] gi|315269103|gb|ADT95956.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS678] Length = 398 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 66/428 (15%), Positives = 136/428 (31%), Gaps = 40/428 (9%) Query: 18 AEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSA 77 + +L L + G+ W P G ++ +R R G E++ P Sbjct: 4 HREIAEQLDLF--HSEPQAPGMIFWHPNGWALFRDIQEHMRRVYRRNGFEEVNTPVFMKK 61 Query: 78 DLWVESGRYDSYGKEMLRLADRNDK-AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 +LW SG D + + M + + + P +F+ + S+R+LP ++ Sbjct: 62 ELWQTSGHMDMFAENMFFGGGKENMGEYVLKPMSCPAHILLFKRGVHSHRDLPLRLFEFG 121 Query: 137 LKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 L R+E G +R+R+F DA+ F ++ +++ G ++ + Sbjct: 122 LVHRNESSGSLNGCLRARQFTQDDAHVFCC-WSQAEEEICGFLQRAKQVYGDYGYHNLDV 180 Query: 196 RAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP 255 + + P S E A C + D + A Sbjct: 181 KISTKPEKALGSDEQWCRAQK-LLDSACQIEGFDAEYQA----------------GEGAF 223 Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV-QM 314 Y ++ L DS+ + + F ++ + G+ M Sbjct: 224 YGPKIEL---SLTDSMGRRWQCGTIQFD----FNLPERFD----VQYTNEQGEFERPVIM 272 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G++ ++ G W + I + ++ ++ A Sbjct: 273 HQAMYGSIERWLGILLEVSQGNLPDW------LHPVPVAIASVNESNSQFVRQLAALCLA 326 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 V D + + P + VG K ++ V +K R G+ + L E+ Sbjct: 327 RDMRVLVDISQNSVARKMKRFHKQKVPYILTVGDKEEAEKCVSVKCRKDGVMTHIPLAEL 386 Query: 435 INYASHRF 442 +Y + + Sbjct: 387 ADYLADKL 394 >gi|317180044|dbj|BAJ57830.1| prolyl-tRNA synthetase [Helicobacter pylori F32] Length = 577 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 100/235 (42%), Positives = 135/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I LGL + A+SG IGG S EF+VL + GE + K+ D+ E Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKNC-DYAANIE 234 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P + + +EVGHIF G Y+ + A+F +GK+ + +MG Y Sbjct: 390 ADIVQVKESDHCPNCQGALKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E D G +W + APF + ++ D+ + ++Y RL + G Sbjct: 450 GIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D DD + G++ +L+G L +IVG + + + E R ++ + E+ Sbjct: 510 DALLDDRDARFGAKMRDFELIGERLALIVGKQTLESKEFECIKRANLEKQTLKDTELEEK 569 Query: 438 ASHRFSN 444 + Sbjct: 570 ILEMLES 576 >gi|149017957|ref|ZP_01834416.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72] gi|147931521|gb|EDK82499.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72] Length = 617 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 106/257 (41%), Positives = 147/257 (57%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E DA++ SH LMLR G + Q S G+YS+LPL + ++ I+R+E Sbjct: 1 MKQSKMPIPTLREMSSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM PTL SA+LW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPTLLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF + Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFI----VLADTGETQVFCSKDFMDFPIPSEN 236 Y RIF R GL + + G +GG S EF+ D V IP+E Sbjct: 181 YERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWVVLDKSVASFDEIPAEV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L IV Sbjct: 241 QEEIKAELLKWIVSGED 257 Score = 142 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 IMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + EK+ A L G +V DD E++G +F+ +DL+G P+++ VG K +D VE+K Sbjct: 534 EAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ + V+ + + Sbjct: 593 IKATGDTIEVHADNVLETL--EILSKK 617 >gi|217033470|ref|ZP_03438900.1| hypothetical protein HP9810_1g84 [Helicobacter pylori 98-10] gi|216944175|gb|EEC23603.1| hypothetical protein HP9810_1g84 [Helicobacter pylori 98-10] Length = 577 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 99/235 (42%), Positives = 134/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ L YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLSVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQNA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I LGL + A+SG IGG S EF+VL + GE + K+ D+ E Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSKEFVVLTECGEDTIVVCKNC-DYAANIE 234 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P + + +EVGHIF G Y+ + A+F +GK+ + +MG Y Sbjct: 390 ADIVQVKESDHCPNCQGELKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E D G +W + APF + ++ D+ + ++Y RL + G Sbjct: 450 GIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D DD + G++ +L+G L +I+G + + + E R ++ + E+ Sbjct: 510 DALLDDRDARFGAKMRDFELIGERLALIIGKQTLESKEFECIKRANLEKQTLKDTELEEK 569 Query: 438 ASHRFSN 444 + Sbjct: 570 ILEMLES 576 >gi|317177054|dbj|BAJ54843.1| prolyl-tRNA synthetase [Helicobacter pylori F16] Length = 577 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 101/235 (42%), Positives = 136/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + M + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNMQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I LGL + A+SG IGG S EF+VL + GE + K+ D+ E Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKNC-DYAANIE 234 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P + + +EVGHIF G Y+ + A+F +GK+ + +MG Y Sbjct: 390 ADIVQVKESDHCPNCQGELKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E D G +W + APF + ++ D+ + ++Y RL + G Sbjct: 450 GIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLHQKGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D DD + G++ +L+G L +IVG + + + E R ++ + E+ Sbjct: 510 DALLDDRDARFGAKMRDFELIGERLALIVGKQTLESKEFECIKRANLEKQTLKDTELEEK 569 Query: 438 ASHRFSN 444 + Sbjct: 570 ILEMLKS 576 >gi|317181547|dbj|BAJ59331.1| prolyl-tRNA synthetase [Helicobacter pylori F57] Length = 577 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 100/235 (42%), Positives = 136/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E ++ + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDTESLDKEFSNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I LGL + A+SG IGG S EF+VL + GE + K+ D+ E Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKNC-DYAANIE 234 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P + + +EVGHIF G Y+ + A+F +GK+ + +MG Y Sbjct: 390 ADIVQVKESDRCPNCQGELKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E D G +W + APF + ++ D+ + ++Y RL + G Sbjct: 450 GIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D DD + G++ +L+G L +IVG + + + E R ++ + E+ Sbjct: 510 DALLDDRDARFGAKMRDFELIGERLALIVGKQTLESKEFECIKRANLEKQTLKDTELEEK 569 Query: 438 ASHRFSN 444 + Sbjct: 570 ILEMLES 576 >gi|332673080|gb|AEE69897.1| proline--tRNA ligase [Helicobacter pylori 83] Length = 577 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 100/235 (42%), Positives = 135/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I LGL + A+SG IGG S EF+VL + GE + K+ D+ E Sbjct: 181 YKEILSDLGLDFRVVEADSGAIGGSKSREFVVLTECGEDTIVVCKNC-DYAANIE 234 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P + + +EVGHIF G Y+ + A+F +GK+ + +MG Y Sbjct: 390 ADIVQVKESDRCPNCQGALKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E D G +W + APF + ++ D+ + ++Y RL + G Sbjct: 450 GIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D DD G++ +L+G L +IVG + + + E R ++ + E+ Sbjct: 510 DALLDDREAHFGAKMRDFELIGERLALIVGKQTLESKEFECIKRANLEKQTLKDTELEEK 569 Query: 438 ASHRFSN 444 + Sbjct: 570 ILEMLES 576 >gi|31544379|ref|NP_852957.1| threonyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)] gi|81572846|sp|Q7NBT5|SYT_MYCGA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|31541223|gb|AAP56525.1| threonyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)] gi|284930421|gb|ADC30360.1| threonyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)] Length = 573 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 72/439 (16%), Positives = 139/439 (31%), Gaps = 34/439 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L I++E RD + L L T G+ WLP GQ + + Q + G Sbjct: 163 YLEIIEEQKQRDHRRINKILELFT-FNQLAGPGMPIWLPNGQIVRQLIGDYVHSVQKKFG 221 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHIKS 124 + ++ P L + DL+ +SG Y+ Y K+M D M+ P ++ + ++ Sbjct: 222 FMAVNTPILGNVDLYKKSGHYNHYAKDMFPELALLDGDKMMLRPMTCPHHCLVYLNKPRN 281 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 Y +LP + L R E G+ R R + D + F + + Sbjct: 282 YYDLPMRLSEDALLHRYEASGGLTGLERVRAMTLLDNHIFCRLDQIKTE-ILNAYQVIKE 340 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + LK + S ++ D+ Sbjct: 341 VIGTFNLKFHRIDLSLHDPNDKQSF-------------IDNEQMWARSENQLEDALKDLG 387 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + A Y D ++ +L + VS ++ F ++ +K Sbjct: 388 LEYTKQVGEAAFYGPKIDF---QVKTALNKIITVSTIQLD----FSLPSE--EKFDIKYK 438 Query: 304 GADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 D V + IG A + G +W + I ++ V Sbjct: 439 TKDNTYEQGVIIHLGIIGTYERFVATLLEQTKGALDLWLA-----PKQAVIIPVNNSVHL 493 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSD-SKVEIKHR 421 + C ++ +L V D E++ + + P+Q+I+G + + + + Sbjct: 494 EGCNQLLEKLLARDLRVTVDSRDERLNKKIRDHQVNKIPVQIIIGDNELKNPDLITYRLY 553 Query: 422 LTGIREDMSLEEVINYASH 440 + L + I Sbjct: 554 GQEDSNQLELTKFIELFKK 572 >gi|162139703|ref|YP_819759.2| prolyl-tRNA synthetase [Streptococcus thermophilus LMD-9] gi|148887037|sp|Q03MK9|SYP_STRTD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS Length = 620 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 102/242 (42%), Positives = 149/242 (61%), Gaps = 2/242 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY+++PL +A++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYMPLANRAIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R++ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNSDFILGPTHEETFTVLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDAYSFHQNYEDLDVTYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL+ + + G +GG S EF+ + E +D I S + + Sbjct: 181 YEAIFTRAGLEFKAIIGDGGAMGGKDSQEFMAVTP--ERTDLNRWVVLDKSIASLDEIPE 238 Query: 241 DI 242 D+ Sbjct: 239 DV 240 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 16/200 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FKAEYVDIRKVKEGEISPDGQGVLQFARGIEIGHIFKLGTRYSESMGANVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P +AP+ + LI + D+ Sbjct: 474 IMGCYGIGVSRILSAVIEQHARLFVNKTPKGQYRYAWGINFPKELAPYDVHLITVNTKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +++ A L+ G DV DD E++GS+F+ +DL+G P++V VG K S+ VE+K Sbjct: 534 EANALTDRLEAALAAEGYDVLIDDRNERVGSKFSDSDLIGLPIRVTVGKK-ASEGVVEVK 592 Query: 420 HRLTGIREDMSLEEVINYAS 439 + TG +++ + +I + Sbjct: 593 IKATGDTIEVNADNLIETLA 612 >gi|225867815|ref|YP_002743763.1| prolyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus] gi|259511619|sp|C0MFA1|SYP_STRS7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|225701091|emb|CAW97925.1| prolyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus] Length = 618 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 110/325 (33%), Positives = 168/325 (51%), Gaps = 19/325 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLAHRTIEKFKTIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FDKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDKSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + + +Y+ + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHQSYDDLDVTYDAYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA------DTGETQVFCSKDFMDFPIPS 234 Y IF R GL + + G +GG S EF+ + D D P Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAITPDRTNLDRWLVLDKSIPSLADIPEEV 240 Query: 235 ENTDFDDIISLNSIVEQWTAP-----YAATSDVHNEKLF--------DSLPENKRVSARG 281 ++ S E A YAA ++ + D L E + + + Sbjct: 241 LEEIKAELASWLVSGEDTIAYSSESSYAANLEMATSEYKPSSKVTALDDLVEIETPNCKT 300 Query: 282 IEVGHIFYFGTKYSLPMSATFKGAD 306 I+ F T++ + + F Sbjct: 301 IDEVAAFLDITEHQVIKTLLFMADH 325 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 105/199 (52%), Gaps = 16/199 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A +D+ K ++ P+ V RGIE+GHIF GT+YS M+A +G+ + Sbjct: 414 FQAEYADIREVKEGETSPDGHGVLQFARGIEIGHIFKLGTRYSDSMAANILDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P +APF + LI + DQ Sbjct: 474 VMGCYGIGVSRILSAVIEQHARLFVSKTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQ 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +D EK+ A L G DV DD E++GS+F+ +DL+G P++V +G K ++ VEIK Sbjct: 534 EAQDLTEKVEASLMAKGYDVLTDDRNERVGSKFSDSDLIGLPIRVTIGKK-AAEGIVEIK 592 Query: 420 HRLTGIREDMSLEEVINYA 438 + TG ++ + +I Sbjct: 593 IKATGDSIEVHADSLIETL 611 >gi|188527045|ref|YP_001909732.1| prolyl-tRNA synthetase [Helicobacter pylori Shi470] gi|226701297|sp|B2US70|SYP_HELPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|188143285|gb|ACD47702.1| prolyl-tRNA synthetase [Helicobacter pylori Shi470] Length = 577 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 100/235 (42%), Positives = 135/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I LGL + A+SG IGG S EF+VL + GE + K+ D+ E Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKNC-DYAANIE 234 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 91/187 (48%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P+ + + +EVGHIF G Y+ + A+F +GK+ + +MG Y Sbjct: 390 ADIVQVKESDHCPDCQGELKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E D G +W + APF + ++ D+ + ++Y RL + G Sbjct: 450 GIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D DD + G++ +L+G L +IVG + + + E R ++ + E+ Sbjct: 510 DALLDDRDARFGAKMRDFELIGERLALIVGKQTLESKEFECIKRANLEKQTLKDTELEEK 569 Query: 438 ASHRFSN 444 + Sbjct: 570 ILEMLKS 576 >gi|298736816|ref|YP_003729346.1| prolyl-tRNA synthetase [Helicobacter pylori B8] gi|298356010|emb|CBI66882.1| prolyl-tRNA synthetase [Helicobacter pylori B8] Length = 577 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 99/235 (42%), Positives = 135/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR + + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKNNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I LGL + A+SG IGG S EF+VL + GE + K+ D+ E Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSKEFVVLTECGEDTIVVCKNC-DYAANIE 234 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 92/187 (49%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P + + +EVGHIF G Y+ + A+F +GK+ + +MG Y Sbjct: 390 ADIVQVKESDHCPNCQGALKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKEQFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E D G +W + APF + ++ D+ + ++Y RL + G Sbjct: 450 GIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D DD + G++ +L+G L +IVG + + + + E R ++ + E+ Sbjct: 510 DALLDDRDARFGAKMRDFELIGERLALIVGKQTLENKEFECVKRANLEKQTIKDIELEEK 569 Query: 438 ASHRFSN 444 ++ Sbjct: 570 ILEILAS 576 >gi|288904427|ref|YP_003429648.1| prolyl-tRNA synthetase [Streptococcus gallolyticus UCN34] gi|306830460|ref|ZP_07463630.1| proline--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325977424|ref|YP_004287140.1| prolyl-tRNA synthetase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731152|emb|CBI12700.1| prolyl-tRNA synthetase [Streptococcus gallolyticus UCN34] gi|304427485|gb|EFM30587.1| proline--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325177352|emb|CBZ47396.1| proS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 618 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 97/212 (45%), Positives = 137/212 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++S+ +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ AI+REE Sbjct: 1 MKQSQMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKAIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLNADLWRESGRYETYGEDLYKLKNRDKSDFILGPTHEETFTSLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF EG +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHADYEGLDTTYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 Y IF R GL + + G +GG S EF+ Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMA 212 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 103/199 (51%), Gaps = 16/199 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ K V RGIE+GHIF GT+YS M AT +G+ + Sbjct: 414 FEAEYVDIREVKEGEISPDGKGVLKFARGIEIGHIFKLGTRYSESMGATILDQNGRAIPI 473 Query: 313 QMGSYGIGAMRVVAAVIESSHD-------------GKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P +APF + +I + D+ Sbjct: 474 VMGCYGIGVSRILSAVIEQHARLFVSKTPKGAYRFAWGINFPKELAPFDVHVITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + K+ A L G +V DD E++GS+F+ +DL+G P++V VG K +D VE+K Sbjct: 534 EAQALTAKVEAELVAKGYEVLVDDRNERVGSKFSDSDLIGLPIRVTVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYA 438 + TG +++ E +I Sbjct: 593 IKATGDTIEVNAENLIETL 611 >gi|218513336|ref|ZP_03510176.1| prolyl-tRNA synthetase [Rhizobium etli 8C-3] Length = 215 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 120/212 (56%), Positives = 160/212 (75%) Query: 227 FMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGH 286 F+DF IP E+TDFD + L +I ++WT+ YAATS++H+E F+++PE +R+SARGIE GH Sbjct: 2 FVDFDIPGESTDFDSVEGLQAIFDKWTSLYAATSEMHDEAAFNAVPEGERLSARGIEAGH 61 Query: 287 IFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAP 346 IFYFGTKYS PM A +G DGK+H+V MGSYGIG R+V A+IE+SHD GIIWP SVAP Sbjct: 62 IFYFGTKYSEPMGAKVQGPDGKEHFVHMGSYGIGPTRLVPAIIEASHDDNGIIWPASVAP 121 Query: 347 FKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIV 406 F + +IN+KA DQ C D CE IYA L+K G DV +DD ++ G++FA ADL+G P+Q+I Sbjct: 122 FDVVVINMKAGDQACDDTCELIYAALTKAGKDVLYDDTDDRAGTKFATADLIGVPVQIIA 181 Query: 407 GSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 G + V++ +VE+K R TG RE M++E IN Sbjct: 182 GPRAVANGEVEVKDRKTGARETMTIEAAINRF 213 >gi|261749266|ref|YP_003256951.1| threonyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497358|gb|ACX83808.1| threonyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 408 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 75/429 (17%), Positives = 143/429 (33%), Gaps = 36/429 (8%) Query: 17 DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS 76 D KL + G+ WLP G N+ + + Q ++G + P + Sbjct: 10 DHRKIGKKLKFFI-FSDRVGTGLPLWLPRGTIFRRNLEEFLTDIQKKSGYEMIMTPHIGH 68 Query: 77 ADLWVESGRYDSYGKEMLRL--ADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQ 134 L+V SG +D YGK+ + +++ + P + +++RS SYR+LP F + Sbjct: 69 KKLYVRSGHWDKYGKDSFKPIQTPHSEEEFLLKPMNCPHHCEVYRSQEWSYRDLPKRFAE 128 Query: 135 IQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSI 193 +R E G+ R R F DA+ F T + + K+ +F RLG Sbjct: 129 FGTVYRYEQSGELHGLTRVRCFTQDDAHIFC-TYDQLLEEFKKVINLVFYVFRRLGFLEY 187 Query: 194 PMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWT 253 +R S + + + S+ Sbjct: 188 TIRVSLRD-------------PKKIHNYIGSDKNWEMAENAIIQAVKEEKLDASLHYGEA 234 Query: 254 APYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV- 312 A Y D + DSL N ++ ++ +KG + + H Sbjct: 235 AFYGPKLDFL---IKDSLDRNWQLGTIQVDYNLP--------ERFDLYYKGKNNERHRPV 283 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 + +G++ + A++ G +W + I +KI + Sbjct: 284 MIHRAPLGSLERLIAILIEHTKGNLPLW------LVPNQAVILPISDKYIIYAKKILNLM 337 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 VF D+ E+I + ++ P +I+G K + + ++ G ++ Sbjct: 338 LNHNIRVFLDERNEKIDKKIRDSEENKIPYMIILGEKEEKNKMISLRRHGLGHIGIFTIS 397 Query: 433 EVINYASHR 441 I+ Sbjct: 398 NGIDAIFKE 406 >gi|308061592|gb|ADO03480.1| prolyl-tRNA synthetase [Helicobacter pylori Cuz20] Length = 577 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 100/235 (42%), Positives = 135/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I LGL + A+SG IGG S EF+VL + GE + K+ D+ E Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKNC-DYAANIE 234 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P+ + + +EVGHIF G Y+ + A+F +GK+ + +MG Y Sbjct: 390 ADIVQVKESDHCPDCQGELKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E D G +W + APF + ++ D+ + ++Y RL + G Sbjct: 450 GIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D DD + G++ +L+G L +IVG + + + E R + + E+ Sbjct: 510 DALLDDRDARFGAKMRDFELIGERLALIVGKQTLESKEFECIKRANLEKRTLKDTELEEK 569 Query: 438 ASHRFSN 444 + Sbjct: 570 ILEMLKS 576 >gi|150865919|ref|XP_001385328.2| threonyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054] gi|149387175|gb|ABN67299.2| threonyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054] Length = 730 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 147/442 (33%), Gaps = 40/442 (9%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD + L ++ S G WLP G + + + IR+E G E+ Sbjct: 316 EAAERDHRRIGKEQELF--FFNEMSPGSAFWLPHGTRIYNALVQFIRDEYQVRGFDEVIT 373 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + + LW SG + +Y + M D + P + IF+S +SYR LP+ Sbjct: 374 PNMFNHKLWETSGHWGNYKENMFTF-DVEKETFGLKPMNCPGHCVIFKSRERSYRELPWR 432 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + R+E G+ R R F DA+ F T + F +++ G Sbjct: 433 VADFGVLHRNEFSGALSGLTRVRRFQQDDAHIFCTTDQIGSE-IKGAFDFLNKVYGTFGF 491 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + + P E A+ K +F + Sbjct: 492 QFKM-ELSTRPEKYVGEIETWNSAEK-----MLEKSLNEFKGEGG----------WELNP 535 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA-DGKD 309 A Y D+ + D+L + + ++ F ++ L A Sbjct: 536 GDGAFYGPKIDIM---ISDALNRWFQCATIQLD----FQLPNRFELEYKAETNDKGSSTS 588 Query: 310 HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIY 369 V + +G++ + A++ + WP ++P +I ++ + + +K+ Sbjct: 589 RPVMIHRAILGSVERMTAILI---EHYKGKWPFWLSPRQILIVPVGPK---YYEYGQKLQ 642 Query: 370 ARLSKV-GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL----TG 424 L+ D G + + L + IVG + + V +++R G Sbjct: 643 KELNDKYSFYADVDVSGNTLPKKIRTGQLYKYNFIFIVGDEEEQSASVNVRNRDIPEEQG 702 Query: 425 IREDMSLEEVINYASHRFSNNR 446 + +EV+ R Sbjct: 703 KNAMVKFDEVVKQLVSLRDEKR 724 >gi|302024530|ref|ZP_07249741.1| prolyl-tRNA synthetase [Streptococcus suis 05HAS68] Length = 620 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 102/257 (39%), Positives = 142/257 (55%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA + SH LMLR G + Q S GIYS+LPL + ++ I+REE Sbjct: 1 MKQSKMIIPTLREMPSDASVISHALMLRAGYVRQISAGIYSYLPLANRVIEKAKNIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ AIE P L SAD+W ESGRY++YG ++ +L +R I GPTHEE +T + R Sbjct: 61 FDKIDAIEFLAPALLSADIWRESGRYETYGDDLYKLKNREGSDFILGPTHEETVTLLARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ K+RDE RPR G++R REF+MKD YSF + E +Y+ + Sbjct: 121 AVQSYKQLPLNIYQIQSKYRDEKRPRNGLLRGREFIMKDGYSFHASYESLDQTYDDYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV----LADTGETQVFCSKDFMDFPIPSEN 236 Y IF R GL+ + + G +GG S EF+ D V IP + Sbjct: 181 YEAIFTRAGLEFKAIIGDGGAMGGKDSQEFMAITPDRTDLDRWVVLDKSVASFEEIPEDV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L V Sbjct: 241 LEAIKEELLAWSVSGED 257 Score = 149 bits (376), Expect = 8e-34, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 16/199 (8%) Query: 256 YAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 D+ K + P+ V RGIE+GHIF GT+YS M+A +G+ + Sbjct: 416 VTEYVDIREVKEGEPSPDGHGVLNFARGIEIGHIFKLGTRYSDSMNANILDENGRSMPII 475 Query: 314 MGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQV 360 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 476 MGCYGIGVSRLLSAVLEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLIPVNVKDEA 535 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + + I A L G +V DD E++G +F+ +DL+G P++V VG K +D VE+K Sbjct: 536 AMELTQSIEASLVGAGYEVLTDDRNERVGVKFSDSDLIGLPIRVTVGKK-AADGIVEVKI 594 Query: 421 RLTGIREDMSLEEVINYAS 439 + TG ++ +++++ Sbjct: 595 KGTGDTVEVHVDQLLETLQ 613 >gi|158291808|ref|XP_313346.3| AGAP003589-PA [Anopheles gambiae str. PEST] gi|157017465|gb|EAA08954.3| AGAP003589-PA [Anopheles gambiae str. PEST] Length = 461 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 146/467 (31%), Positives = 226/467 (48%), Gaps = 49/467 (10%) Query: 2 RRSKYFLPILQENPRDAEIASH-------KLMLRTGMIHQHSKGIYSWLPLGQKALDNVN 54 R SK F P L P++A I S +LML G+I Q G + LPL Q++L Sbjct: 3 RVSKLFQPALI-IPKNATIKSQDITSKSQRLMLEQGLIRQAGNGTFYLLPLLQRSLQKAV 61 Query: 55 AIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG----KEMLRLADRNDKAMIYGPTH 110 +I GA +M +P L SA+LW +SGR E+L+ DR+ K I GPTH Sbjct: 62 DLIDRHMEAVGAQKMVLPLLTSAELWKKSGRLSVTEAGTPTELLQTTDRHGKVQILGPTH 121 Query: 111 EEVMT-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEG 169 EE +T + +YR P YQI KFRDE++PRFG+MR++EFLMKD Y+FD+ G Sbjct: 122 EESITSLLAAIAPVTYRQFPLRLYQISTKFRDEMKPRFGLMRAKEFLMKDLYTFDVDRAG 181 Query: 170 SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMD 229 + +Y+ + +Y R+F +G+ + + + G +GG LSHE+ ++ GE ++ Sbjct: 182 CQETYDSVNEAYGRLFREIGVPFVKVAGDCGTMGGSLSHEYHFPSEVGEDELIRCTRC-- 239 Query: 230 FPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSAR--GIEVGHI 287 +++ E + A + S R GIEV H Sbjct: 240 --------------GMHTNAELFPA---------LSERCKSCETGSDTFERQAGIEVAHA 276 Query: 288 FYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPF 347 F +Y+ + AT A+GK +QMG YGIG R++AA IE K I WP ++AP+ Sbjct: 277 FILEDRYTKALGATCLAANGKPVPLQMGCYGIGVTRLLAASIEVLSSEKEIRWPVALAPY 336 Query: 348 KISLINIKAHDQVCRDA---CEKIYARLSK----VGCDVFWDDMGE-QIGSQFAVADLLG 399 ++ +I KA + A K++ L G DV DD + IG + +G Sbjct: 337 RVCIITPKAGSKEEAQATPWVGKLHDDLQSLANCAG-DVIVDDRTQLTIGKRLLDTRKMG 395 Query: 400 FPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 +P+ V+VG+K S+ K+E+ G + + ++ + + + Sbjct: 396 YPVIVVVGAKAASEKKLELHDVAAGTEVSLPYSDTLSAVAEILTAAK 442 >gi|223933900|ref|ZP_03625863.1| prolyl-tRNA synthetase [Streptococcus suis 89/1591] gi|223897426|gb|EEF63824.1| prolyl-tRNA synthetase [Streptococcus suis 89/1591] Length = 620 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 102/257 (39%), Positives = 142/257 (55%), Gaps = 4/257 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA + SH LMLR G + Q S GIYS+LPL + ++ I+REE Sbjct: 1 MKQSKMIIPTLREMPSDASVISHALMLRAGYVRQISAGIYSYLPLANRVIEKAKNIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ AIE P L SAD+W ESGRY++YG ++ +L +R I GPTHEE +T + R Sbjct: 61 FDKIDAIEFLAPALLSADIWRESGRYETYGDDLYKLKNREGSDFILGPTHEETVTLLARD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 ++SY+ LP YQIQ K+RDE RPR G++R REF+MKD YSF + E +Y+ + Sbjct: 121 AVQSYKQLPLNIYQIQSKYRDEKRPRNGLLRGREFIMKDGYSFHASYESLDQTYDDYKAA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV----LADTGETQVFCSKDFMDFPIPSEN 236 Y IF R GL+ + + G +GG S EF+ D V IP + Sbjct: 181 YEAIFTRAGLEFKAIIGDGGAMGGKDSQEFMAITPDRTDLDRWVVLDKSVASFEEIPEDV 240 Query: 237 TDFDDIISLNSIVEQWT 253 + L V Sbjct: 241 LEAIKEELLAWSVSGED 257 Score = 149 bits (376), Expect = 8e-34, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 16/199 (8%) Query: 256 YAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQ 313 D+ K + P+ V RGIE+GHIF GT+YS M+A +G+ + Sbjct: 416 VTEYVDIREVKEGEPSPDGHGVLNFARGIEIGHIFKLGTRYSDSMNANILDENGRSMPII 475 Query: 314 MGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQV 360 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 476 MGCYGIGVSRLLSAVLEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLIPVNVKDEA 535 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + + I A L G +V DD E++G +F+ +DL+G P++V VG K +D VE+K Sbjct: 536 AMELTQSIEASLVGAGYEVLTDDRNERVGVKFSDSDLIGLPIRVTVGKK-AADGIVEVKI 594 Query: 421 RLTGIREDMSLEEVINYAS 439 + TG ++ +++++ Sbjct: 595 KGTGDTVEVHVDQLLETLQ 613 >gi|210134438|ref|YP_002300877.1| prolyl-tRNA synthetase [Helicobacter pylori P12] gi|226701295|sp|B6JKG9|SYP_HELP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|210132406|gb|ACJ07397.1| prolyl-tRNA synthetase [Helicobacter pylori P12] Length = 577 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 99/235 (42%), Positives = 135/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I LGL + A+SG IGG S EF+VL + GE + ++ D+ E Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCQNC-DYAANIE 234 Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 91/187 (48%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P + + +EVGHIF G Y+ + A+F +GK+ + +MG Y Sbjct: 390 ADIVQVKESDRCPNCQGELKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKEQFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E D G +W + APF + ++ D+ + ++Y RL + G Sbjct: 450 GIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNLKDEAQKKLAFEVYERLLQKGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D DD + G++ +L+G L +IVG + + + E R ++ + E+ Sbjct: 510 DALLDDRDARFGAKMRDFELIGERLALIVGKQTLESKEFECIKRANLEKQTIKDIELEEK 569 Query: 438 ASHRFSN 444 ++ Sbjct: 570 ILEMLAS 576 >gi|116515019|ref|YP_802648.1| hypothetical protein BCc_078 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116256873|gb|ABJ90555.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 642 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 68/431 (15%), Positives = 126/431 (29%), Gaps = 42/431 (9%) Query: 17 DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQS 76 D S +L I + S G+ W G + +R + + IE+ P + Sbjct: 241 DHRKISK--LLSLYHIQKESPGMIFWHKNGYIIFKQLENFLRNKLFQNNYIEVKSPIIID 298 Query: 77 ADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 LW +SG + Y + + + P + IF+ +KSY++LP + Sbjct: 299 KSLWKKSGHWKHYNQSIFT-TKSENNQYCIKPMNCPAHVQIFKYGLKSYKDLPIRMAEFG 357 Query: 137 LKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 R E G+ R R F DA+ F + N ++H G K I + Sbjct: 358 SCHRQETSGSLHGLFRVRGFTQDDAHIFCTKKQIKSEL-NHCIRLLFDLYHTFGFKKIFI 416 Query: 196 RAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP 255 + + P D D A Sbjct: 417 KFSTRPENR-----------------IGKDDIWDQAEKDLELVLKKNNLFFEYQIGEGAF 459 Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 Y ++ L D+L + ++ FY S + A + + + Sbjct: 460 YGPKIEI---ALEDNLKRIWQCGTIQLD----FYL----SKQLDAFYINKNNIKKNPIII 508 Query: 316 SYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLS 373 R + +IE + I + + I + Sbjct: 509 HRAFLGSIERFIGILIEEYNGKLPIWLCPIQVAIINV-------SEKHIFFIKNIEKKFL 561 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 K D I + P +I+G K V ++ + I++R I+ ++ Sbjct: 562 KNNIRFISDISNNSISFKIRFYLEQKVPYIIIIGDKEVKNNYITIRNRFNNIQYKQNINF 621 Query: 434 VINYASHRFSN 444 I + ++ Sbjct: 622 FIKKIINNVNS 632 >gi|308182413|ref|YP_003926540.1| prolyl-tRNA synthetase [Helicobacter pylori PeCan4] gi|308064598|gb|ADO06490.1| prolyl-tRNA synthetase [Helicobacter pylori PeCan4] Length = 577 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 99/235 (42%), Positives = 135/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I LGL + A+SG IGG S EF+VL + GE + ++ D+ E Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCQNC-DYAANIE 234 Score = 140 bits (352), Expect = 6e-31, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P + + +EVGHIF G Y+ + A+F +GK+ + +MG Y Sbjct: 390 ADIVQVKESDCCPNCQGALKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E D G +W + APF + ++ D+ + ++Y RL + G Sbjct: 450 GIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D DD + G++ +L+G L +IVG + + + E R ++ + E+ Sbjct: 510 DALLDDRDARFGAKMRDFELIGERLALIVGKQTLESKEFECIKRANLEKQTIKDIELEEK 569 Query: 438 ASHRFSN 444 + Sbjct: 570 ILEMLES 576 >gi|308189939|ref|YP_003922870.1| threonine--tRNA ligase [Mycoplasma fermentans JER] gi|319777220|ref|YP_004136871.1| threonyl-tRNA synthetase [Mycoplasma fermentans M64] gi|238809889|dbj|BAH69679.1| hypothetical protein [Mycoplasma fermentans PG18] gi|307624681|gb|ADN68986.1| threonine--tRNA ligase [Mycoplasma fermentans JER] gi|318038295|gb|ADV34494.1| Threonyl-tRNA synthetase [Mycoplasma fermentans M64] Length = 582 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 69/443 (15%), Positives = 140/443 (31%), Gaps = 36/443 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +L IL + RD ++ + +H +G WL G + + ++ + + Sbjct: 171 YLAILADRKERDHRKLGKEMKIFA--MHPLCGQGFPIWLEDGMYIHNEIKNLVLKMDRKY 228 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P S DL+ SG Y +M ++ +I P + +S Sbjct: 229 GFTEVLTPHFGSEDLYKTSGHLAHYKDDMFAPLVIENERLIPRPMTCPHHIVCYNLEKRS 288 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR+LP + + +R E + ++ + + + M+ Sbjct: 289 YRDLPIRYSEQSQLYRYEKSGALTGLERVRGMLLTEGHLFVREDQIEQEIKSMYQLIEET 348 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD-FMDFPIPSENTDFDDII 243 + + D + + + + + + DD+ Sbjct: 349 LKIFNIDISYISLSLR--------------DKNDKEKYFNDNKMWNSAEKMLKKALDDMG 394 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + V A Y D+ ++ +L VS ++ T+ Sbjct: 395 VKYTTVVGEAAFYGPKIDI---QIDTALGHEITVSTIQLDFLQP--------KNFDITYT 443 Query: 304 GADGKD-HYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 +GK+ V + IG A++ G W + I + Sbjct: 444 DKNGKEARPVMIHRGLIGTYERFVAILLEQTKGNLPFWLA-----PKQITIIPVNLNENL 498 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D I+ RL V DD E++ + A + QVI+G+ D + + Sbjct: 499 DYSRNIFNRLWNCNFRVKIDDRDERLNKKIREAQMSKSKYQVILGANEEKDKTISYREYG 558 Query: 423 TGIREDMSLEEVINYASHRFSNN 445 + +++EE IN + +N Sbjct: 559 KEDTKTVTVEEFINILTKLRNNY 581 >gi|229491433|ref|ZP_04385257.1| prolyl-tRNA synthetase [Rhodococcus erythropolis SK121] gi|229321718|gb|EEN87515.1| prolyl-tRNA synthetase [Rhodococcus erythropolis SK121] Length = 581 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 124/387 (32%), Positives = 176/387 (45%), Gaps = 30/387 (7%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+++P DAE+ASHKL++R G + + + G+YSWLPLG + L V ++REE Sbjct: 4 RLSHLFLRTLRDDPSDAEVASHKLLVRAGYVRRIAPGVYSWLPLGLRVLREVERVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ +P L D + S R+ YG + RL DR + GPTHEE+ + Sbjct: 64 NAIGGQEILLPALLPRDPYEASNRWTEYGPNLFRLKDRKGNDYMLGPTHEELFALTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQ+Q K+RDE RPR G++R REFLMKD+YSFDLT EG SY +Y Sbjct: 124 YNSYKDFPVTLYQVQTKYRDEERPRAGILRGREFLMKDSYSFDLTDEGLTESYQAHRGAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPSENTDFD 240 +IF RLG+K + + A SG +GG S EF+ ++ GE C + + + T Sbjct: 184 EKIFTRLGVKYVIVSATSGAMGGSASEEFLAESEIGEDTYVRCLESGYAANVEAVKTVVP 243 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D + P A D N D+L + A G ++G Sbjct: 244 DS------IPFDGLPEAKVYDTANTPTIDTLVD----WANGADLGR-------------- 279 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T AD + + G ++ I D + + + I D Sbjct: 280 TVTAADTLKNIMVKTRLPGGEWELL--GIGIPGDREVDEKRLEASLEPAEFVMITETDFK 337 Query: 361 CRDACEKIY---ARLSKVGCDVFWDDM 384 K Y L G D Sbjct: 338 NNPFLAKGYIGPKALQANGVRYLVDPR 364 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 65/188 (34%), Positives = 96/188 (51%), Gaps = 4/188 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D+ P+ VSARGIE+GH+F G KY+ + +GK MG Sbjct: 395 GTIEAAEVRDGDASPDGAGTLVSARGIEIGHVFQLGRKYTDVFTVDVLAENGKPVRPTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R+VA + E HD KG+ WP V+P + L I D+ R+ E + A+L + Sbjct: 455 SYGVGVSRLVAVIAEQHHDEKGLRWPAEVSPADVYL-VIANKDETAREGAEGLAAQLDRA 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD G +F ++L+G PL V+VG + +D KVEI+ R TG ++ I Sbjct: 514 GLEVILDDRKASPGVKFKDSELIGVPLIVVVG-RGWADGKVEIRDRFTGESREIDANSAI 572 Query: 436 NYASHRFS 443 Sbjct: 573 EEIISAVR 580 >gi|15644866|ref|NP_207036.1| prolyl-tRNA synthetase [Helicobacter pylori 26695] gi|2501038|sp|P56124|SYP_HELPY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|2313329|gb|AAD07305.1| prolyl-tRNA synthetase (proS) [Helicobacter pylori 26695] Length = 577 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 99/235 (42%), Positives = 135/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I LGL + A+SG IGG S EF+VL + GE + ++ D+ E Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCQNC-DYAANIE 234 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P + + +EVGHIF G Y+ + A+F +GK+ + +MG Y Sbjct: 390 ADIVQVKESDRCPNCQGALKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKEQFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E D G +W + APF + ++ D+ + ++Y RL + G Sbjct: 450 GIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D DD + G++ +L+G L +I+G + + + E R ++ + E+ Sbjct: 510 DALLDDRDARFGAKMRDFELIGERLALIIGKQTLESKEFECIKRANLEKQTIKDIELEEK 569 Query: 438 ASHRFSN 444 + Sbjct: 570 ILEMLES 576 >gi|208434185|ref|YP_002265851.1| prolyl-tRNA synthetase [Helicobacter pylori G27] gi|226701296|sp|B5ZA05|SYP_HELPG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|208432114|gb|ACI26985.1| prolyl-tRNA synthetase [Helicobacter pylori G27] Length = 577 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 99/235 (42%), Positives = 135/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I LGL + A+SG IGG S EF+VL + GE + ++ D+ E Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCQNC-DYAANIE 234 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 91/187 (48%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P + + +EVGHIF G Y+ + A+F +GK+ + +MG Y Sbjct: 390 ADIVQIKESDHCPNCQGALKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKEQFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E D G +W + APF + ++ D+ + ++Y RL + G Sbjct: 450 GIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D DD + G++ +L+G L +IVG + + + E R ++ + E+ Sbjct: 510 DALLDDRDARFGAKMRDFELIGERLALIVGKQALESKEFECIKRANLEKQTLKDTELEEK 569 Query: 438 ASHRFSN 444 ++ Sbjct: 570 ILEMLAS 576 >gi|254778944|ref|YP_003057049.1| prolyl-tRNA synthetase [Helicobacter pylori B38] gi|254000855|emb|CAX28787.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) (Global RNA synthesis factor) [Helicobacter pylori B38] Length = 577 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 100/235 (42%), Positives = 135/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I LGL + A+SG IGG S EF+VL + GE + K+ D+ E Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCKNC-DYAANIE 234 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P + + +EVGHIF G Y+ + A+F +GK+ + +MG Y Sbjct: 390 ADIVQVKESDCCPNCQGALKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKEQFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R++ A++E D G +W + APF + ++ D+ + ++Y RL + G Sbjct: 450 GIGISRLLGAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D DD + G++ +L+G L +I+G + + + E R ++ + E+ Sbjct: 510 DALLDDRDARFGAKMRDFELIGERLALIIGKQTLESKEFECIKRANLEKQTIKDIELEEK 569 Query: 438 ASHRFSN 444 + Sbjct: 570 ILEMLES 576 >gi|207108695|ref|ZP_03242857.1| prolyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1] Length = 254 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 99/235 (42%), Positives = 135/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I LGL + A+SG IGG S EF+VL + GE + ++ D+ E Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSKEFVVLTECGEDTIVVCQNC-DYAANIE 234 >gi|331087039|ref|ZP_08336114.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA] gi|330409489|gb|EGG88932.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA] Length = 564 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 102/307 (33%), Positives = 158/307 (51%), Gaps = 5/307 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+EN ++ + S L++R GMI + S GIY +P+G++ L + I+REE Sbjct: 1 MKLSNSYFYTLRENVKEEDSTSGNLLVRAGMIKKSSSGIYMIMPMGKRVLKKIEEIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P + +++ +SGR +++G M L DR K + GPTHEE+ T Sbjct: 61 MDAAGAQELLMPAMIPEEIYEKSGRREAFGSNMFALKDRYQKNYVLGPTHEELFTMAAMM 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++ P+ YQIQ KFRDE RPR+G++R REF+MKDAYSFD+ G SY KMF + Sbjct: 121 KGSSYKDFPYNLYQIQTKFRDETRPRYGLIRVREFIMKDAYSFDIDEAGLHESYMKMFHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y I R L ++A++G +GG LS EF + D GE + DF E T+ Sbjct: 181 YQNIMERCKLNYKIVKADTGAMGGSLSEEFQAITDIGEDVIVTCDGC-DFSSNLEITEVI 239 Query: 241 DI----ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 D+ + ++E P A T + S+ E + ++ + + Sbjct: 240 DVSEPSDAEEQVMEVVETPNARTMEEVAAFFHKSVNEFVKTLIYTVDGKTMAFLLKGNRE 299 Query: 297 PMSATFK 303 Sbjct: 300 LNETKVL 306 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 64/227 (28%), Positives = 109/227 (48%), Gaps = 1/227 (0%) Query: 218 ETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV 277 E + ++ + + D +N ++ + A +E + Sbjct: 339 ECPIVMDREVTNMKNFIVGANKTDHHIVNVNLKDFEVEIVADIAQVHEGDVCPVCGKPLK 398 Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 +GIEVG+ F GTKY+ + ++ D K H V+MG YG G R +AA++E +D G Sbjct: 399 FCKGIEVGNTFKLGTKYAKTLGLEYQDVDNKLHPVEMGCYGFGLERCMAAIVEQHNDEAG 458 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP SVAPF+++++ + + D+ ++Y L K G DV DD E+ G +F +L Sbjct: 459 IIWPASVAPFEVAVVVVSSKDEEQMRIGSELYEALKKEGIDVLLDDRKERPGVKFKDMEL 518 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +G P ++ VG + + + KVE + R +++L EVI Sbjct: 519 IGIPYRITVG-RGIQEGKVEFRARTAAENREIALGEVIKLVKEELQK 564 >gi|295664831|ref|XP_002792967.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01] gi|226278488|gb|EEH34054.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01] Length = 764 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 77/469 (16%), Positives = 145/469 (30%), Gaps = 49/469 (10%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ + L L+E R+ + L + S G LP G K ++ + +++R E Sbjct: 316 KQMQEHLKFLEEAEKRNHLRIGKEQDLF--FFDEVSPGCPFLLPNGTKIINALQSLLRAE 373 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + +W +SG + Y +M +L D + P + +F Sbjct: 374 YRKRGYQEVQSPNMYDVGIWRQSGHWAHYKDDMFKL-DVEKREWALKPMNCPGHAVMFGH 432 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SYR LP + R+E G+ R R+F D + F + + + +F Sbjct: 433 RERSYRELPLRIADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTEDQIMQE-IDGLFD 491 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G ++ + P E ++ Sbjct: 492 FLRSVYGLFGFSF-KLKLSTRPEKYMGKLE-----------------TWNYAEEQLRAAL 533 Query: 240 DDIISLNSIV-EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTK--- 293 + V E A Y D+ + D+L + + ++ F Sbjct: 534 TKFKGNDWEVDEGDGAFYGPKIDI---TIQDALKREFQCATIQLDYQMPVNFKLEYMTGE 590 Query: 294 ---YSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIW---------P 341 + P T + A D S G R VI + G + Sbjct: 591 TGAKAKPADKTTEDAANPDAPSTNSSSEPGPGRARPVVIHRAIIGSFERFLGIIIEHFGG 650 Query: 342 DSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFP 401 I I D E++ L +V D G + + + + Sbjct: 651 KWPFWLSPRQILIVPVMPAVNDYVEELREILRGDKLNVDIDISGNTMQKKIRSGQIAQYN 710 Query: 402 LQVIVGSKFVSDSKVEIKHRLTGIRED----MSLEEVINYASHRFSNNR 446 +VG++ + V I++R + + LEE R Sbjct: 711 FIFVVGAQEKATRTVNIRNRDDPSSQAKGSLVPLEEARVKLRALRKERR 759 >gi|241948445|ref|XP_002416945.1| threonyl-trna synthetase, mitochondrial precursor, putative [Candida dubliniensis CD36] gi|223640283|emb|CAX44533.1| threonyl-trna synthetase, mitochondrial precursor, putative [Candida dubliniensis CD36] Length = 455 Score = 194 bits (493), Expect = 3e-47, Method: Composition-based stats. Identities = 78/475 (16%), Positives = 157/475 (33%), Gaps = 72/475 (15%) Query: 7 FLPI-LQEN----PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 FL +E + I+S +L+ T S G +LP G + L+ + ++ +Q Sbjct: 18 FLSTKTKEAESSTQSNHVISSKQLLYTT---DPTSPGSIFFLPHGTRILNKLIQFMKNQQ 74 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR-----------LADRNDKAMIYGPTH 110 + G E+ P + LW +SG +D+Y +M + + + P + Sbjct: 75 TKYGFQEVVTPLIFKTKLWKKSGHWDNYKDDMFKVVGNDITKEEHTDNIEEHEYGLKPMN 134 Query: 111 EEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEG 169 IF +SY+ LP + R+E G+ R R F D + F + Sbjct: 135 CPSHCMIFAKFDRSYQELPVRYSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCSMDQI 194 Query: 170 SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMD 229 ++ G+ I + P E + + D D Sbjct: 195 DGE-IKNTLDLIKDTYNVFGINEIEFYLSTRP----------------EDKFIGNIDTWD 237 Query: 230 FPIPSENTDFDDIISLNSI--VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 + + E A Y DV L D+ + +V ++ Sbjct: 238 IAELQLKNVLNATAGEGNWSIREGDGAFYGPKIDVL---LKDAFNKKHQVGTIQLD---- 290 Query: 288 FYFGTKYSLPMSATFKGADG--KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 F ++ + G DG + + G++ A++ D WP + Sbjct: 291 FQLPNRF----ELKYVGEDGKRDHQPILVHRAVFGSLERFFAILL---DHYQGKWPFWIN 343 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLS--------------KVGCDVFWDDMGEQIGSQ 391 P + ++ I + E++ +LS V D GE +G++ Sbjct: 344 PRQALIVPIN---ESHVPVAEELQKKLSGDIISCDKSIAPLTGFNFHVDVDKRGETVGAR 400 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 A G+ +++G K +++ ++ R +M+ +++ + + Sbjct: 401 TKDAIQKGYSYLIMIGDKDIANGTFAVRSRDDRKIRNMTSDDIYKMFIALEQSYK 455 >gi|210623134|ref|ZP_03293600.1| hypothetical protein CLOHIR_01550 [Clostridium hiranonis DSM 13275] gi|210153811|gb|EEA84817.1| hypothetical protein CLOHIR_01550 [Clostridium hiranonis DSM 13275] Length = 580 Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats. Identities = 107/240 (44%), Positives = 136/240 (56%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK F+P +E P D EI SHKLM+R+GMI + + GIY+ LPLG K + II+EE Sbjct: 17 MRFSKMFIPTKREIPTDVEIESHKLMIRSGMIKKSASGIYNQLPLGLKVERKIENIIKEE 76 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 EM L ++LW ESGR+ G EM RL DR K GPTHEEV TDI R Sbjct: 77 VEDADFREMLCSALIPSELWQESGRWARRGAEMFRLEDRTGKEFCLGPTHEEVFTDIVRQ 136 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQIQ K+RDE +PRFG +R++ F M DAYSFD E SY +M + Sbjct: 137 EVSSYKQLPVKLYQIQSKYRDEKKPRFGAIRTKSFTMFDAYSFDKDEESLNKSYEEMIAA 196 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 + RIF R G+K + AESG G S EF+V ++ GE ++ D Sbjct: 197 FKRIFDRCGVKYSLVEAESGIEGAPSSIEFMVKSEIGEDELAICSDCTYAANRESAECMP 256 Score = 153 bits (387), Expect = 5e-35, Method: Composition-based stats. Identities = 64/212 (30%), Positives = 104/212 (49%), Gaps = 3/212 (1%) Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYF 290 + T + D N + D P+ RGIE+GHIF Sbjct: 369 KNLITGANKTGYHFKNANFGRDFEGTVGDFRNVREGDKCPKCGAPLKIRRGIEIGHIFKA 428 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 G K+S M+A ++ + D Y+ +G Y IG R+ A +IE + D GI+WP SVAPF++ Sbjct: 429 GQKFSENMNAMYRSEEETDEYIHLGCYEIGTERLTATIIEQNFDADGIVWPLSVAPFEVE 488 Query: 351 LINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKF 410 +I + ++ + E+IY L +G DV DD + G++F +DL+G P+++ VG + Sbjct: 489 IIPVNLKNEDVVNTAERIYKELKLMGVDVLIDDRDARPGTKFKDSDLIGIPVRITVG-RD 547 Query: 411 VSDSKVEIKHRLTGIREDMSLEEVINYASHRF 442 + + VE+K R + RE +S + R Sbjct: 548 LKEGLVEMKFRNSEERELISAVDAAEIVRDRL 579 >gi|308184043|ref|YP_003928176.1| prolyl-tRNA synthetase [Helicobacter pylori SJM180] gi|308059963|gb|ADO01859.1| prolyl-tRNA synthetase [Helicobacter pylori SJM180] Length = 577 Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats. Identities = 99/235 (42%), Positives = 135/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I LGL + A+SG IGG S EF+VL + GE + ++ D+ E Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCQNC-DYAANIE 234 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 91/187 (48%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P + + +EVGHIF G Y+ + A+F +GK+ + +MG Y Sbjct: 390 ADIVQVKESDHCPNCQGALKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKEQFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E D G +W + APF + ++ D+ + ++Y RL + G Sbjct: 450 GIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D DD + G++ +L+G L +I+G + + + + E R ++ + E+ Sbjct: 510 DTLLDDRDARFGAKMRDFELIGERLALIIGKQTLENKEFECIKRANLEKQTIKDIELEEK 569 Query: 438 ASHRFSN 444 + Sbjct: 570 ILEMLES 576 >gi|225871275|ref|YP_002747222.1| prolyl-tRNA synthetase [Streptococcus equi subsp. equi 4047] gi|254782916|sp|C0M9E6|SYP_STRE4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|225700679|emb|CAW95268.1| prolyl-tRNA synthetase [Streptococcus equi subsp. equi 4047] Length = 618 Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats. Identities = 108/307 (35%), Positives = 162/307 (52%), Gaps = 19/307 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLAHRTIEKFKTIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 ++ GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FDKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDKSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + + +Y+ + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHQSYDDLDVTYDAYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA------DTGETQVFCSKDFMDFPIPS 234 Y IF R GL + + G +GG S EF+ + D D P Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAITPDRTNLDRWLVLDKSIPSLADIPEEV 240 Query: 235 ENTDFDDIISLNSIVEQWTAP-----YAATSDVHNEKLF--------DSLPENKRVSARG 281 ++ S E A YAA ++ + D L E + + + Sbjct: 241 LEEIKAELASWLVSGEDTIAYSSESSYAANLEMATSEYKSSSKVTALDDLVEIETPNCKT 300 Query: 282 IEVGHIF 288 I+ F Sbjct: 301 IDEVAAF 307 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 105/199 (52%), Gaps = 16/199 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A +D+ K ++ P+ V RGIE+GHIF GT+YS M+A +G+ + Sbjct: 414 FQAEYADIREVKEGETSPDRHGVLQFARGIEIGHIFKLGTRYSDSMAANILDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P +APF + LI + DQ Sbjct: 474 VMGCYGIGVSRILSAVIEQHARLFVSKTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQ 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +D E++ A L G DV DD E++GS+F+ +DL+G P++V +G K ++ VEIK Sbjct: 534 EAQDLTERVEASLMAKGYDVLTDDRNERVGSKFSDSDLIGLPIRVTIGKK-AAEGIVEIK 592 Query: 420 HRLTGIREDMSLEEVINYA 438 + TG ++ + +I Sbjct: 593 IKATGDSIEVHADSLIETL 611 >gi|320547753|ref|ZP_08042037.1| proline--tRNA ligase [Streptococcus equinus ATCC 9812] gi|320447513|gb|EFW88272.1| proline--tRNA ligase [Streptococcus equinus ATCC 9812] Length = 618 Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats. Identities = 95/212 (44%), Positives = 137/212 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++++ +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQTQMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLNADLWRESGRYETYGEDLYKLKNRDKSDFILGPTHEETFTSLIRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF EG +Y + + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHADYEGLDETYEEYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 Y IF R GL + + G +GG S EF+ Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMA 212 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 104/199 (52%), Gaps = 16/199 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ K V RGIE+GHIF GT+YS M AT +G+ + Sbjct: 414 FEAEYVDIREVKEGEISPDGKGVLKFARGIEIGHIFKLGTRYSESMGATILDQNGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESSHD-------------GKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P +APF + +I + D+ Sbjct: 474 IMGCYGIGVSRILSAVIEQHARLFVSKTPKGAYRFAWGINFPKELAPFDVHVITVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 + K+ A L + G +V DD E++GS+F+ +DL+G P++V VG K +D VE+K Sbjct: 534 EAQALTAKVEAELVEKGYEVLVDDRNERVGSKFSDSDLIGLPIRVTVGKK-AADGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYA 438 + TG +++ E +I Sbjct: 593 IKATGDTIEVNAENLIETL 611 >gi|55820298|ref|YP_138740.1| prolyl-tRNA synthetase [Streptococcus thermophilus LMG 18311] gi|55822188|ref|YP_140629.1| prolyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066] gi|81820361|sp|Q5M1N3|SYP_STRT1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|81820523|sp|Q5M674|SYP_STRT2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|55736283|gb|AAV59925.1| prolyl-tRNA synthetase [Streptococcus thermophilus LMG 18311] gi|55738173|gb|AAV61814.1| prolyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066] Length = 620 Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats. Identities = 102/242 (42%), Positives = 148/242 (61%), Gaps = 2/242 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY+++PL +A++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYMPLANRAIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDKSDFILGPTHEETFTVLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDAYSFHQNYEDLDVTYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL+ + + G +GG S EF+ + E +D I S + + Sbjct: 181 YEAIFTRAGLEFKAIIGDGGAMGGKDSQEFMAVTP--ERTDLNRWVVLDKSIASLDEIPE 238 Query: 241 DI 242 D+ Sbjct: 239 DV 240 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 16/200 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FKAEYVDIRKVKEGEISPDGQGVLQFARGIEIGHIFKLGTRYSESMGANVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P +AP+ + LI + D+ Sbjct: 474 IMGCYGIGVSRILSAVIEQHARLFVNKTPKGQYRYAWGINFPKELAPYDVHLITVNTKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +++ A L+ G DV DD E++GS+F+ +DL+G P++V VG K S+ VE+K Sbjct: 534 EANALTDRLEAALAAEGYDVLIDDRNERVGSKFSDSDLIGLPIRVTVGKK-ASEGVVEVK 592 Query: 420 HRLTGIREDMSLEEVINYAS 439 + TG +++ + +I + Sbjct: 593 IKATGDTIEVNADNLIETLA 612 >gi|269114879|ref|YP_003302642.1| threonyl-tRNA synthetase (threonine-tRNAligase, thrRS) [Mycoplasma hominis] gi|268322504|emb|CAX37239.1| Threonyl-tRNA synthetase (Threonine-tRNAligase, ThrRS) [Mycoplasma hominis ATCC 23114] Length = 579 Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats. Identities = 63/441 (14%), Positives = 136/441 (30%), Gaps = 31/441 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L IL+E RD L L T +G WL G K + + + + + G Sbjct: 169 YLDILRERKERDHRKIGRDLNLFT-FNQLGGQGFPFWLEDGMKIHNAIRDYVLKLDKKFG 227 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L+ SG + Y M +++ ++ P +F S +SY Sbjct: 228 FREVLTPHFGEKKLYEISGHWAHYQDTMFAPIKMDNETLVARPMTCPHHIILFNSTRRSY 287 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 ++LP + + +R E + + + P+ + + ++ L+ Sbjct: 288 KDLPIRYSEQSRLYRYEASGALSGLERVRGMDLTEGHIFVRPDQIRSEFKHLYKMILQAL 347 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 ++ + + F + + + ++ Sbjct: 348 KDFNIEIDHISLSLRDPQDT-------------QKFFQNDEMWNKAENDLREVLGELNIK 394 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGA 305 A Y D ++ +L +S ++ F +++ + Sbjct: 395 YKEFIGEAAFYGPKVDF---QVKTALNRIITMSTLQLD----FLLPSRFEMKF---VDSN 444 Query: 306 DGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDAC 365 + V + IG A + G W I + + + Sbjct: 445 EQFVTPVLIHRGLIGTYERFIATLLEQTKGVLPFWLSPRQITIIPI------NDELNEKA 498 Query: 366 EKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGI 425 + +Y +V D E+I + A +L V++G K + + + ++ Sbjct: 499 QDLYNEFLDEDFNVNIDIRPERINKKIRDAQILKTKFIVVIGKKEIETNTLSVREYGKDD 558 Query: 426 REDMSLEEVINYASHRFSNNR 446 + S EE +NY N + Sbjct: 559 SKTYSKEEFVNYLKQLKKNLK 579 >gi|312863998|ref|ZP_07724234.1| proline--tRNA ligase [Streptococcus vestibularis F0396] gi|322517545|ref|ZP_08070414.1| proline--tRNA ligase [Streptococcus vestibularis ATCC 49124] gi|311100411|gb|EFQ58618.1| proline--tRNA ligase [Streptococcus vestibularis F0396] gi|322123805|gb|EFX95379.1| proline--tRNA ligase [Streptococcus vestibularis ATCC 49124] Length = 620 Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats. Identities = 102/242 (42%), Positives = 148/242 (61%), Gaps = 2/242 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY+++PL +A++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYMPLANRAIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDKSDFILGPTHEETFTALVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDAYSFHQNYEDLDVTYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL+ + + G +GG S EF+ + E +D I S + + Sbjct: 181 YEAIFTRAGLEFKGIIGDGGAMGGKDSQEFMAVTP--ERTDLNRWVVLDKSIASLDEIPE 238 Query: 241 DI 242 D+ Sbjct: 239 DV 240 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 16/200 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FKAEYVDIREVKEGEISPDGQGVLQFARGIEIGHIFKLGTRYSESMGANVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P +AP+ + LI + D+ Sbjct: 474 IMGCYGIGVSRILSAVIEQHARLFVNKTPKGQYRYAWGINFPKELAPYDVHLITVNTKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +++ + L+ G DV DD E++GS+F+ +DL+G P++V VG K S+ VE+K Sbjct: 534 EANALTDRLESALAAEGYDVLIDDRNERVGSKFSDSDLIGLPIRVTVGKK-ASEGVVEVK 592 Query: 420 HRLTGIREDMSLEEVINYAS 439 + TG +++ + +I + Sbjct: 593 IKATGDTIEVNADNLIETLA 612 >gi|195016104|ref|XP_001984341.1| GH15069 [Drosophila grimshawi] gi|193897823|gb|EDV96689.1| GH15069 [Drosophila grimshawi] Length = 461 Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats. Identities = 140/468 (29%), Positives = 229/468 (48%), Gaps = 50/468 (10%) Query: 2 RRSKYFLPILQENPRDAEI-------ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVN 54 + S F P L P++A + S KL+ G++ G Y +P+ Q+A+D Sbjct: 3 KASSLFWPAL-VTPKNAIVKQTEQLSRSQKLLTELGLVKPGCNGTYQIMPIAQRAVDKCI 61 Query: 55 AIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM 114 +++ G ++S+P L LW ++GR + E + DR+ K + PTHEE + Sbjct: 62 NLVQRNMQEAGGQKISMPVLTPTQLWKKTGRLEGDISEFYMVRDRSGKQFLMSPTHEEAV 121 Query: 115 T-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 T + + SYR LP YQI KFRDEL+ RFG+MR++EFLMKD Y+FD+T E ++ + Sbjct: 122 TAMLATTAPISYRQLPLRLYQIGPKFRDELKSRFGLMRAKEFLMKDMYTFDVTKEAAEKT 181 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y ++ +Y + F +L + + + A +G +GG LSHE+ ++ GE + + Sbjct: 182 YARISNTYAQFFRQLEVPFVTVEAATGIMGGSLSHEYHYISPVGEDTLLKCNNC------ 235 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPEN---KRVSARGIEVGHIFYF 290 YA +V ++ P + + RG+EV H F Sbjct: 236 ---------------------GYAGNVEVFGNTSANTCPSCQGSQLIPVRGVEVAHTFLL 274 Query: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKIS 350 G KYS P+ ATF GK + MG YGIG RV+AA +E + + WP +AP+ + Sbjct: 275 GDKYSKPLGATFLNTSGKPETLVMGCYGIGITRVIAAALEVLSTEQELRWPKLLAPYDVC 334 Query: 351 LINIKAHDQVCRDACE----KIYARLSKV-GCDVFW-DDMGE-QIGSQFAVADLLGFPLQ 403 LI K + E ++ +L+++ G + DD E IG + A LG PL Sbjct: 335 LIGPKQGSKEQVP-AEGVEIELLQQLTQICGAEELLHDDRKELTIGKRLFDAKRLGHPLT 393 Query: 404 VIVGSKFV--SDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 ++VG+K V + K+E+ H + ++ L EV++ + + + +L Sbjct: 394 IVVGTKAVQKEEPKLEL-HLSGAEKLELELPEVLSLVTAHVRHKQQLL 440 >gi|289580635|ref|YP_003479101.1| threonyl-tRNA synthetase [Natrialba magadii ATCC 43099] gi|289530188|gb|ADD04539.1| threonyl-tRNA synthetase [Natrialba magadii ATCC 43099] Length = 650 Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats. Identities = 69/446 (15%), Positives = 134/446 (30%), Gaps = 46/446 (10%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNR 63 + + RD +++ L + I G+ + P G+ L + + + Sbjct: 239 NFLERKQEAEKRDHRRIGNEMNLFS--IQDVTGPGLPLYHPPGKTVLKELEDFVEDLNKD 296 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G + P + DLW SG Y++Y +M + + D P + IF+ Sbjct: 297 AGYDYVETPHVFKTDLWHRSGHYENYQDDMF-IFNVGDDEFGLKPMNCPGHAAIFQDQSW 355 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR+LP + + +R E R G+ R F + D + + P+ + ++ + Sbjct: 356 SYRDLPIRYAENGKVYRKEQRGELSGLSRVWAFTIDDGH-LFIRPDQIEQEVEEIMDMII 414 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 + L+ A T + S + + T + Sbjct: 415 DVLETFDLEYEMALA------------------TRPEKSVGSDEIWEHAEEQLETVLEKR 456 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 I E A Y D E D++ ++ F ++ ++ Sbjct: 457 NLEYDIEEGDGAFYGPKIDFAFE---DAIGRAWDGPTVQLD----FNMPDRFD----LSY 505 Query: 303 KGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 G D ++H M + R +IE Sbjct: 506 VGEDNEEHEPVMIHRALYGSYERFFMMLIEHYEGKFPFWLAPEQVRVLPI-------SDA 558 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 ++ V DD + + A P Q+IVG D + ++ Sbjct: 559 NLGYAYQVANEFDD--FRVEVDDRDSTLERKIRAAHDDRVPYQIIVGDNEEEDGNISVRD 616 Query: 421 RLTGIREDMSLEEVINYASHRFSNNR 446 R D+ +E+ ++ R Sbjct: 617 RFEDQEYDVEIEDFHDHLVAERDEQR 642 >gi|194749304|ref|XP_001957079.1| GF10245 [Drosophila ananassae] gi|190624361|gb|EDV39885.1| GF10245 [Drosophila ananassae] Length = 458 Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats. Identities = 140/465 (30%), Positives = 221/465 (47%), Gaps = 46/465 (9%) Query: 2 RRSKYFLPILQENPRDAEI-------ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVN 54 + S+ F P L P++A + S KL+ G+I S G Y +P+ Q++LD + Sbjct: 3 KASRLFCPALI-TPKNAVVKQTEQLSRSQKLLTDLGLIKSGSNGTYQIMPIAQRSLDKLI 61 Query: 55 AIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM 114 +++ G ++S+P L + LW ++GR + E + DR+ K + PTHEE + Sbjct: 62 DLVQSNMQLAGGQKISLPILTPSALWKKTGRLEGDISEFYMVRDRSGKQFLMSPTHEEAI 121 Query: 115 T-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 T + + SYR LP YQI KFRDEL+ RFG+MR++EFLMKD YSFD++ E ++ S Sbjct: 122 TAMLATTSPISYRQLPLRLYQIGPKFRDELKSRFGLMRAKEFLMKDMYSFDVSEETARES 181 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y+ + +Y R+F +L + + + A +G +GG LSHE+ ++ GE + Sbjct: 182 YSAVSEAYDRLFQQLEVPFVKVNAATGMMGGSLSHEYHYVSTVGEDSLVQCTSC------ 235 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 + + + S + RG+E+ H F G K Sbjct: 236 --------------------GFAGNSEVLTTPENCPSCQSSNLNEVRGVEIAHTFLLGDK 275 Query: 294 YSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 YS P+ ATF GK V MG YGIG RV+AA +E + + WP +APF + LI Sbjct: 276 YSTPLGATFLNTSGKPQSVIMGCYGIGITRVIAAALEVFSSEQELQWPKLLAPFDVCLIG 335 Query: 354 IKAHDQVCRDACEKIYARLSKV------GCDVFWDDM-GEQIGSQFAVADLLGFPLQVIV 406 K + + E I L ++ DD IG + A LG PL ++V Sbjct: 336 PKQGSKEQQP-AEVIENELLNSVGQLCGPQELLHDDRKDLTIGKRLLEAKRLGHPLTIVV 394 Query: 407 GSKFVSDS--KVEIKHRLTGIREDMSLEEVINYASHRFSNNRPVL 449 G K + K+E+ H G + ++ L E + + + + +L Sbjct: 395 GGKAIQQDSPKLEV-HFNGGDKLELDLSETLKLVAEHSRHKKDLL 438 >gi|260942551|ref|XP_002615574.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] gi|238850864|gb|EEQ40328.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] Length = 453 Score = 193 bits (491), Expect = 4e-47, Method: Composition-based stats. Identities = 74/457 (16%), Positives = 149/457 (32%), Gaps = 67/457 (14%) Query: 16 RDAEIASHKLMLRTGMI-HQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTL 74 + I++ +L+ I + G +LP G + + + ++ +Q + G E+ P + Sbjct: 28 ANHAISNKQLL----YITDPVTPGSIFFLPHGTRIFNKLVHFMKNQQLKYGFQEVITPLI 83 Query: 75 QSADLWVESGRYDSYGKEMLR-----------LADRNDKAMIYGPTHEEVMTDIFRSHIK 123 LW SG +D+Y +M + + + P + IF + Sbjct: 84 YKTKLWEVSGHWDNYKDDMFKVIGNDLTKEKDSEEAHLHEYGLKPMNCPGHCLIFSKFER 143 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SY LP R+E G+ R R F D + F + + Sbjct: 144 SYNELPIRLSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCEMDQIHQE-ITNTINLIK 202 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ G+ D + + T + D + D Sbjct: 203 DTYNVFGI--------------DSTKDVDFFLSTRPEKFIGDAQTWDEAESQLASVLDTT 248 Query: 243 ISLNSI--VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 N E A Y D+ L D+ + +V ++ F ++ Sbjct: 249 AGKNKWSIREGDGAFYGPKIDIL---LTDAFNKKHQVGTIQLD----FQLPARF----EL 297 Query: 301 TFKGADG--KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD 358 + +G + + + G++ A++ D WP + P + +I + Sbjct: 298 KYISRNGDRDNQPIMIHRAVFGSLERFFAILL---DHYQGKWPFWINPRQAIIIPVSDKH 354 Query: 359 QVCRDACEKIYARL--------------SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQV 404 +A EK+ +L + V D E +G++ A G+ + Sbjct: 355 H---EAAEKLQKQLVGDIVNSESSIAPMTGYNFFVDVDRRSETVGNRIKDAVKKGYSYIL 411 Query: 405 IVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHR 441 +VG K + + V I+ R + E+ ++EE+ Sbjct: 412 MVGDKDIENGTVAIRSRDSRKVENKTVEEIYEKFVSL 448 >gi|315084265|gb|EFT56241.1| threonyl-tRNA synthetase [Propionibacterium acnes HL027PA2] Length = 689 Score = 193 bits (491), Expect = 4e-47, Method: Composition-based stats. Identities = 65/448 (14%), Positives = 128/448 (28%), Gaps = 45/448 (10%) Query: 7 FLPILQENPR-DAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + ++E R D +L L + + G+ + P G + + G Sbjct: 250 YQQRIKEAERRDHRKLGAELDLFS-FPEEIGPGLVVFHPKGAMLRHLIEEHVIARHMEAG 308 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLA------------DRNDKAMIYGPTHEEV 113 + P + L+ SG Y M R + + + Sbjct: 309 FNFVHTPEITKGGLFHTSGHLPYYADTMFPPMLVDEERDEEGNVTRAGQEYYLKAMNCPM 368 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 IFRS +SYR LP F+++ +R E G+ R R F D++++ + Sbjct: 369 HNLIFRSRGRSYRELPLRFFEMGHDYRYEKSGVVHGLTRMRGFAQDDSHTYCTREQAPGE 428 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 K +L I GL + + +FI + Sbjct: 429 -IKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDED-----------WQVAT 476 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y + ++ D++ ++S + Sbjct: 477 DTLDQVCRSTGLQLVPDPGGAAFYGPKV---SVQVRDAIGRTWQMSTIQYDFNQP----- 528 Query: 293 KYSLPMSATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISL 351 + ADG + S +G++ V+ + G +W Sbjct: 529 ---ERFDLEYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW------LSPVQ 579 Query: 352 INIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + + + D L G V D ++ G + A P +I G + Sbjct: 580 VRLVPVAEAFNDYVTGFAEVLGSRGIRVETDLSSDRFGKKIRNASKDKVPFILIAGGEDA 639 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYAS 439 V + R + L+ + + Sbjct: 640 EAGAVSFRLRDGSQVNGVVLDGAVRIIA 667 >gi|322373816|ref|ZP_08048351.1| proline--tRNA ligase [Streptococcus sp. C150] gi|321277188|gb|EFX54258.1| proline--tRNA ligase [Streptococcus sp. C150] Length = 620 Score = 193 bits (491), Expect = 4e-47, Method: Composition-based stats. Identities = 102/242 (42%), Positives = 148/242 (61%), Gaps = 2/242 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY+++PL +A++ AI+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYMPLANRAIEKFKAIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDKSDFILGPTHEETFTALVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHQNYEDLDVTYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL+ + + G +GG S EF+ + E +D I S + + Sbjct: 181 YEAIFTRAGLEFKGIIGDGGAMGGKDSQEFMAVTP--ERTDLDRWVVLDKSIASLDEIPE 238 Query: 241 DI 242 D+ Sbjct: 239 DV 240 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 103/200 (51%), Gaps = 16/200 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 414 FKAEYVDIREVKEGEISPDGQGVLKFARGIEIGHIFKLGTRYSESMGANVLDENGRAVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P +AP+ + LI + D+ Sbjct: 474 IMGCYGIGVSRILSAVIEQHARLFVNKTPKGQYRYAWGINFPKDLAPYDVHLITVNTKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 E++ A L G DV DD E++GS+F+ +DL+G P++V VG K S+ VE+K Sbjct: 534 EATALTERLEAALMAEGYDVLTDDRNERVGSKFSDSDLIGLPIRVTVGKK-ASEGVVEVK 592 Query: 420 HRLTGIREDMSLEEVINYAS 439 + TG +++ + +I + Sbjct: 593 IKATGDTIEVNADNLIETLA 612 >gi|254444928|ref|ZP_05058404.1| threonyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235] gi|198259236|gb|EDY83544.1| threonyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235] Length = 610 Score = 193 bits (491), Expect = 4e-47, Method: Composition-based stats. Identities = 73/467 (15%), Positives = 133/467 (28%), Gaps = 59/467 (12%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNR 63 Y I + RD ++ L I + +G+ W P G + I E+ + Sbjct: 171 TYIEQIEESRKRDHRRVGKEMGLF--HIDEAVGQGLILWKPKGAVIRQELQDFISEQLLK 228 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSY-----------------------GKEMLRLADRN 100 ++ P + L+ SG + Y + + Sbjct: 229 QEYTQVFTPHIGKLGLYKTSGHFPYYQESQFPPLIERDSLADLADENATCSTLTNQLETG 288 Query: 101 DKA-MIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMK 158 D + P + + I+ S SYR+LP + +R E G+ R R F Sbjct: 289 DIEGYLLKPMNCPMHIKIYDSEPHSYRDLPVRLAEFGTVYRWEQSGELNGMTRVRGFTQD 348 Query: 159 DAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGE 218 DA+ F + +F LG++ +R D D E Sbjct: 349 DAHIFCTEEQLQGE-IQGCLDLVKIVFGTLGMEDYSVRVSLRDPESDKYVGDPANWDKAE 407 Query: 219 TQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVS 278 + + +D P E E A Y D + D + ++ Sbjct: 408 AAIREAVKTLDVPYVEE--------------EGEAAFYGPKIDF---VVKDVIGREWQLG 450 Query: 279 ARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI 338 ++ F Y+ + + R +IE Sbjct: 451 TVQVDYNLPVRFDINYTG------SDNKPHRPVMVHRAPFGSMERFCGLLIEHFGGDFPT 504 Query: 339 IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLL 398 D + + +L G D +++G++ A+L Sbjct: 505 WLAPEQVRILPI-------SDKVADYAQSLLDQLKANGVRATADFNSDKLGAKIRNAELD 557 Query: 399 GFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 P +IVG + ++KV ++ R + M EE +N Sbjct: 558 KVPNTLIVGEREAEENKVSVRSRFHDGKPTMLFEEFETEVLQLINNR 604 >gi|306826599|ref|ZP_07459905.1| proline--tRNA ligase [Streptococcus pyogenes ATCC 10782] gi|304431207|gb|EFM34210.1| proline--tRNA ligase [Streptococcus pyogenes ATCC 10782] Length = 618 Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats. Identities = 108/307 (35%), Positives = 158/307 (51%), Gaps = 19/307 (6%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E DA++ SH LM+R G + Q S GIY++LPL + ++ I+REE Sbjct: 1 MKQSKLLIPTLREMSSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R++ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDNSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHHNYEDLDVTYEDYRQA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLA------DTGETQVFCSKDFMDFPIPS 234 Y IF R GL + + G +GG S EF+ + D D P Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAITPARTDLDRWVVLDKSIASMDDIPKEV 240 Query: 235 ENTDFDDIISLNSIVEQWTAP-----YAATSDVHN--------EKLFDSLPENKRVSARG 281 ++ + E A YAA ++ D+L E + + Sbjct: 241 LEEIKAELAAWMISGEDTIAYSTESSYAANLEMATNEYKPSSKVAAEDALAEVETPHCKT 300 Query: 282 IEVGHIF 288 I+ F Sbjct: 301 IDEVAAF 307 Score = 143 bits (360), Expect = 7e-32, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 104/199 (52%), Gaps = 16/199 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ V RGIEVGHIF GT+YS M AT +G+ + Sbjct: 414 FQAEYVDIREVKEGEISPDGHGVLQFARGIEVGHIFKLGTRYSDSMGATILDENGRTVPI 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P +APF + LI + DQ Sbjct: 474 VMGCYGIGVSRILSAVIEQHARLFVNKTPKGDYRYAWGINFPKELAPFDVHLITVNVKDQ 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 V +D K+ A L G DV DD E++GS+F+ +DL+G P++V VG K ++ VEIK Sbjct: 534 VAQDLTAKLEADLMAKGYDVLTDDRNERVGSKFSDSDLIGLPIRVTVGKK-AAEGIVEIK 592 Query: 420 HRLTGIREDMSLEEVINYA 438 + TG +++ E +I Sbjct: 593 IKATGDSIEVNAENLIETL 611 >gi|152996743|ref|YP_001341578.1| tRNA synthetase class II (G H P and S) [Marinomonas sp. MWYL1] gi|150837667|gb|ABR71643.1| tRNA synthetase class II (G H P and S) [Marinomonas sp. MWYL1] Length = 395 Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats. Identities = 75/427 (17%), Positives = 150/427 (35%), Gaps = 42/427 (9%) Query: 18 AEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSA 77 + +L L Q + G+ W P G N+ +R + G E+ P L Sbjct: 4 HRELAEQLDLF--HSEQQAPGMLFWHPNGWHLFQNIQEHMRRCYRQYGFKEVRTPQLMKK 61 Query: 78 DLWVESGRYDSYGKEMLR-LADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 +LW SG D Y ++M D+ P +++ + SYR+LP ++ Sbjct: 62 ELWHISGHMDMYAQDMFFGGEQNGDQEYALKPMSCPAHILMYKRGVHSYRDLPLKLFEFG 121 Query: 137 LKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 L R+E G +R R+F DA+ F K + +I++ G +++ + Sbjct: 122 LVHRNESSGSLNGCLRLRQFTQDDAHVFCA-WSQVKQEVGQFLQRAKQIYNDYGYQALEV 180 Query: 196 RAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP 255 + + P A+ D + +EN FD + A Sbjct: 181 KISTQPEKALGDDASWRRAE----------DILKEACQAENVPFDIQV-------GEGAF 223 Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK-DHYVQM 314 Y ++ L D++ + ++ F ++ F GK + + + Sbjct: 224 YGPKIEL---ALQDAVGRIWQCGTIQLD----FNLPDRF----ELEFDNEQGKAEQPIIL 272 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G++ ++ G W + + + + D ++ A L + Sbjct: 273 HQAVYGSIERWIGILLEVSQGVLPEW------IHPQPVALVSVNDSVLDYANQLRAELEQ 326 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G +V + +G + + L P +I+G + K+ I R E ++ EE+ Sbjct: 327 QGINVSCEFGDHSVGRKIKRSFELKIPNIIIIGEQEAQAGKLTI--RRGKHIEIINQEEL 384 Query: 435 INYASHR 441 I++ + Sbjct: 385 ISFLKTK 391 >gi|325663512|ref|ZP_08151922.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA] gi|325470411|gb|EGC73642.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA] Length = 564 Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats. Identities = 102/307 (33%), Positives = 157/307 (51%), Gaps = 5/307 (1%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S + L+EN ++ + S L++R GMI + S GIY +P+G++ L + I+REE Sbjct: 1 MKLSNSYFYTLRENVKEEDSTSGNLLVRAGMIKKSSSGIYMIMPMGKRVLKKIEEIVREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA E+ +P + +++ +SGR +++G M L DR K + GPTHEE+ T Sbjct: 61 MDAAGAQELLMPAMIPEEIYEKSGRREAFGSNMFALKDRYQKNYVLGPTHEELFTMAAMM 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 SY++ P+ YQIQ KFRDE RPR+G++R REF+MKDAYSFD+ G SY KMF + Sbjct: 121 KGSSYKDFPYNLYQIQTKFRDETRPRYGLIRVREFIMKDAYSFDIDEAGLHESYMKMFHA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y I R L ++A++G +GG LS EF + D GE + DF E T+ Sbjct: 181 YQNIMERCKLNYKIVKADTGAMGGSLSEEFQAITDIGEDVIVTCDGC-DFSSNLEITEVI 239 Query: 241 D----IISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSL 296 D + ++E P A T + S+ E + ++ + + Sbjct: 240 DASEPSDAEEQVMEVVETPNARTMEEVAAFFHKSVNEFVKTLIYTVDGKTMAFLLKGNRE 299 Query: 297 PMSATFK 303 Sbjct: 300 LNETKVL 306 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 64/227 (28%), Positives = 110/227 (48%), Gaps = 1/227 (0%) Query: 218 ETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV 277 E + ++ + + D +N ++ + A +E + Sbjct: 339 ECPIVMDREVTNMKNFIVGANKTDHHIVNVNLKDFEVEIVADIAQVHEGDICPVCGKPLK 398 Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKG 337 +GIEVG+ F GTKY+ + ++ D K H V+MG YG G R +AA++E +D G Sbjct: 399 FCKGIEVGNTFKLGTKYAKTLGLEYQDVDNKLHPVEMGCYGFGLERCMAAIVEQHNDEAG 458 Query: 338 IIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADL 397 IIWP SVAPF+++++ + + D+ ++Y L K G DV DD E+ G +F +L Sbjct: 459 IIWPASVAPFEVAVVVVSSKDEEQMRIGNELYEALKKEGIDVLLDDRKERPGVKFKDMEL 518 Query: 398 LGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 +G P ++ VG + + + KVE + R +++L+EVI Sbjct: 519 IGIPYRITVG-RGIQEGKVEFRARTAAENREIALDEVIKLVKEELQK 564 >gi|225016294|ref|ZP_03705486.1| hypothetical protein CLOSTMETH_00197 [Clostridium methylpentosum DSM 5476] gi|224950969|gb|EEG32178.1| hypothetical protein CLOSTMETH_00197 [Clostridium methylpentosum DSM 5476] Length = 574 Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats. Identities = 99/263 (37%), Positives = 141/263 (53%), Gaps = 2/263 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK +E P DA I SH ML+ G I Q GIYS L ++ ++ + IIREE Sbjct: 8 MLLSKLLGERYKEKPADASIPSHIFMLKGGYIRQVGNGIYSMLMPTKRIVNKIENIIREE 67 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + E+ P + +LW ESGRY+S G E++R DR+ + G THEE + R+ Sbjct: 68 MDAIDGQEVLFPVVLPRELWDESGRYESVGSELVRFHDRSGGDYVLGMTHEEAAVHLARN 127 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +SY PF YQIQ KFRDE R R G++R REF MKDAYSF + E + Y+ + Sbjct: 128 EAQSYAKYPFMIYQIQTKFRDEPRSRGGLIRVREFTMKDAYSFHTSQEDLERYYDICHKA 187 Query: 181 YLRIFHRLGLKSIPMR-AESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPSENTD 238 Y RIF R+GL + ++SG +GG ++HEF++L D GE + C + Sbjct: 188 YERIFERVGLPEVISVGSDSGMMGGAVAHEFMLLCDAGEDTIVTCDSCGYKANMEVAEGV 247 Query: 239 FDDIISLNSIVEQWTAPYAATSD 261 D + + + +++ P A T D Sbjct: 248 LDKVEAQPAEIKKVHTPGANTID 270 Score = 144 bits (362), Expect = 4e-32, Method: Composition-based stats. Identities = 65/188 (34%), Positives = 96/188 (51%), Gaps = 2/188 (1%) Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 Y + V + RG+EVG+IF GTKY+ M + DGK MG Sbjct: 386 YIDVAKVKEGAKCCNCG-APLKLNRGVEVGNIFQLGTKYTESMQMVYTDQDGKQQTPIMG 444 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 YGIG R+ A +IES HD G IWP +VAP++I + + + ++Y +LSK Sbjct: 445 CYGIGVGRLAACIIESHHDDYGPIWPYAVAPWQIHICALSNKKMDVQPIARELYDKLSK- 503 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 +V DD G G QFA ADLLG P++++V K + + +VEI R I+ + LE++ Sbjct: 504 NYEVILDDRGANAGVQFADADLLGVPIRIVVSVKNIENGEVEISTRDKSIQTKVKLEDIE 563 Query: 436 NYASHRFS 443 + + Sbjct: 564 AEIAKIVA 571 >gi|226306102|ref|YP_002766062.1| prolyl-tRNA synthetase [Rhodococcus erythropolis PR4] gi|259511615|sp|C0ZY88|SYP_RHOE4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|226185219|dbj|BAH33323.1| prolyl-tRNA synthetase [Rhodococcus erythropolis PR4] Length = 581 Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats. Identities = 123/387 (31%), Positives = 176/387 (45%), Gaps = 30/387 (7%) Query: 2 RRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 R S FL L+++P DAE+ASHKL++R G + + + G+YSWLPLG + L V ++REE Sbjct: 4 RLSHLFLRTLRDDPSDAEVASHKLLVRAGYVRRIAPGVYSWLPLGLRVLREVERVVREEM 63 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSH 121 N G E+ +P L D + S R+ YG + RL DR + GPTHEE+ + Sbjct: 64 NAIGGQEILLPALLPRDPYEASNRWTEYGPNLFRLKDRKGNDYMLGPTHEELFALTVKGE 123 Query: 122 IKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 SY++ P T YQ+Q K+RDE RPR G++R REFLMKD+YSFDL+ EG SY +Y Sbjct: 124 YNSYKDFPVTLYQVQTKYRDEERPRAGILRGREFLMKDSYSFDLSDEGLTESYQAHRGAY 183 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF-CSKDFMDFPIPSENTDFD 240 +IF RLG+K + + A SG +GG S EF+ ++ GE C + + + T Sbjct: 184 EKIFTRLGVKYVIVSATSGAMGGSASEEFLAESEIGEDTYVRCLESGYAANVEAVKTVVP 243 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D + P A D N D+L + A G ++G Sbjct: 244 DS------IPFDGLPEAKVYDTANTPTIDTLVD----WANGADLGR-------------- 279 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 T AD + + G ++ I D + + + I D Sbjct: 280 TITAADTLKNIMVKTRLPGGEWELL--GIGIPGDREVDEKRLEASLEPAEFVMITETDFK 337 Query: 361 CRDACEKIY---ARLSKVGCDVFWDDM 384 K Y L G D Sbjct: 338 NNPFLAKGYIGPKALQANGVRYLVDPR 364 Score = 151 bits (381), Expect = 3e-34, Method: Composition-based stats. Identities = 65/188 (34%), Positives = 97/188 (51%), Gaps = 4/188 (2%) Query: 258 ATSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 T + + D+ P+ VSARGIE+GH+F G KY+ + +GK MG Sbjct: 395 GTIEAAEVRDGDASPDGAGTLVSARGIEIGHVFQLGRKYTDVFTVDVLAENGKPVRPTMG 454 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKV 375 SYG+G R+VA + E HD KG+ WP V+P + L I D+ R+ E + A+L + Sbjct: 455 SYGVGVSRLVAVIAEQHHDEKGLRWPAEVSPADVYL-VIANKDETAREGAEGLAAQLDRA 513 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G +V DD G +F ++L+G PL V+VG + +D KVEI+ R TG ++ + I Sbjct: 514 GLEVILDDRKASPGVKFKDSELIGVPLIVVVG-RGWADGKVEIRDRFTGESREIDADSAI 572 Query: 436 NYASHRFS 443 Sbjct: 573 EAIISAVR 580 >gi|317013684|gb|ADU81120.1| prolyl-tRNA synthetase [Helicobacter pylori Gambia94/24] Length = 577 Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats. Identities = 99/235 (42%), Positives = 136/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + + + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENVTHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + M + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDTESLGEEFLNMQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I LGL + A+SG IGG S EF+VL + GE + ++ D+ E Sbjct: 181 YKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCQNC-DYAANIE 234 Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats. Identities = 49/204 (24%), Positives = 93/204 (45%) Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA 300 D ++ ++ + A E + + +EVGHIF G Y+ + A Sbjct: 373 DFHAVGVDLKGFENLVYADIVQVKESDRCLNCQGALKYHKSLEVGHIFKLGQGYAKSLKA 432 Query: 301 TFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQV 360 +F +GK+ + +MG YGIG R+++A++E D G +W + APF + ++ D+ Sbjct: 433 SFLDKNGKEQFFEMGCYGIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNLKDEA 492 Query: 361 CRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKH 420 + ++Y RL + G DV DD + G++ +L+G L +IVG + + + E Sbjct: 493 QKKLAFEVYERLLQKGVDVLLDDRDARFGAKMRDFELIGERLALIVGKQTLESKEFECIK 552 Query: 421 RLTGIREDMSLEEVINYASHRFSN 444 R ++ + E+ + Sbjct: 553 RANLEKQTIKDTELEEKILEMLES 576 >gi|149198845|ref|ZP_01875887.1| prolyl-tRNA synthetase [Lentisphaera araneosa HTCC2155] gi|149138043|gb|EDM26454.1| prolyl-tRNA synthetase [Lentisphaera araneosa HTCC2155] Length = 577 Score = 193 bits (490), Expect = 6e-47, Method: Composition-based stats. Identities = 104/323 (32%), Positives = 153/323 (47%), Gaps = 17/323 (5%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR SK ++E P+DA+ ASH ++R G I S GIY+ LPL ++ + IIREE Sbjct: 1 MRLSKLVGKRVKEAPKDAQSASHIFLMRGGYIRPVSTGIYTLLPLAKRMTTKIENIIREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 E+ +P + A++W ESGRYDS + +LR DRN K M+ THEE + + R+ Sbjct: 61 MEAVDCQEIMMPVVNPAEIWQESGRYDSVDQSLLRFKDRNQKDMVLAMTHEEAVCHMART 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 I SY+ LP + YQIQ K+RDE R R G++R REF MKDAYSF + + Y+++ + Sbjct: 121 EITSYKQLPASVYQIQTKYRDEARARAGLIRVREFTMKDAYSFHDSEKCLSDYYDRVHQA 180 Query: 181 YLRIFHRLGLKSIPM-RAESGPIGGDLSHEFIVLADTGETQVFCSK-------------- 225 Y RIF R+GL +++G IGG LSHEF+ ++D GE +F S Sbjct: 181 YERIFERVGLSDCVSIESDAGMIGGSLSHEFMAISDIGEDTLFLSPDRQYKANREIATAK 240 Query: 226 --DFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 + E ++ + + + T+ + RG Sbjct: 241 LVYKKEEAQELEKVHTPTQKTIEEVSKFLGVAESDTAKAVFYASASIEDKVILCIIRGDL 300 Query: 284 VGHIFYFGTKYSLPMSATFKGAD 306 + G S Sbjct: 301 EVNETKLGNHLSCGDLVAANDEQ 323 Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 96/196 (48%), Gaps = 6/196 (3%) Query: 257 AATSDVHNEKLFDSLP--ENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A DV + D P +GIEVG+IF GTKYS M + +GK M Sbjct: 382 ADIIDVATVREGDPCPVTGEPLEMLKGIEVGNIFQLGTKYSDSMGVRYLDKNGKAQIPTM 441 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G YGIG R +A+V E +D G +WP S+AP+++ +I + ++ E++Y L K Sbjct: 442 GCYGIGVGRALASVCEQRNDKWGPVWPISIAPYQVHVIALTGGQPEIKEEAEELYKNLQK 501 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE- 433 G +V +DD + G F ADL+G PL++I+ K ++ E K R +E + E Sbjct: 502 EGIEVIFDDRDPKPGFAFNDADLIGVPLRLIISKKSMAQDSYEFKTRDGSEKELIPKAEA 561 Query: 434 ---VINYASHRFSNNR 446 ++N + + Sbjct: 562 FEFIVNRVKAELNKFK 577 >gi|3859700|emb|CAA21975.1| mitochondrial threonyl tRNA synthetase [Candida albicans] Length = 455 Score = 193 bits (490), Expect = 6e-47, Method: Composition-based stats. Identities = 79/477 (16%), Positives = 158/477 (33%), Gaps = 76/477 (15%) Query: 7 FLPI-LQEN----PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQ 61 FL +E + I+S +L+ T S G +LP G + L+ + ++ +Q Sbjct: 18 FLSTKTKEAESSTQSNHVISSKQLLYTT---DPTSPGSIFFLPHGTRILNKLIQFMKNQQ 74 Query: 62 NRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLR-----------LADRNDKAMIYGPTH 110 + G E+ P + LW +SG +D+Y +M + + + P + Sbjct: 75 TKYGFQEVVTPLIFKTKLWKKSGHWDNYKDDMFKVVGNDITKEEYTDNIEEHEYGLKPMN 134 Query: 111 EEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEG 169 IF +SY+ LP + R+E G+ R R F D + F + Sbjct: 135 CPSHCMIFAKFDRSYQELPVRYSDFSSLHRNEASGALSGLTRVRRFHQDDGHIFCSMDQI 194 Query: 170 SKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMD 229 ++ G+ I + P E + + D Sbjct: 195 DGE-IKNTLELIKDTYNVFGINEIEFYLSTRP----------------EDKFIGEIETWD 237 Query: 230 FPIPSENTDFDDIISLNSIV--EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI 287 + + E A Y DV L D+ + +V ++ Sbjct: 238 IAESQLKNVLNSTAGEGNWATREGDGAFYGPKIDVL---LKDAFNKKHQVGTIQLD---- 290 Query: 288 FYFGTKYSLPMSATFKGADG--KDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVA 345 F ++ + G DG + + G++ A++ D WP + Sbjct: 291 FQLPNRF----ELKYVGEDGKRDHQPILVHRAVFGSLERFFAILL---DHYQGKWPFWIN 343 Query: 346 PFKISLINIKAHDQVCRDACEKIYARLSKVG----------------CDVFWDDMGEQIG 389 P + ++ I + E++ +LS G V D GE +G Sbjct: 344 PRQALIVPIN---ESHVPVAEELQKKLS--GDIVSCDNAIAPLTGFTFHVDIDKRGETVG 398 Query: 390 SQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 ++ A G+ +++G K +++ ++ R ++M+ +E+ + + Sbjct: 399 ARTKDAIQKGYSYLIMIGDKDIANGTFAVRSRDDRKIKNMTSDEIYKMFIALEQSYK 455 >gi|328947267|ref|YP_004364604.1| Prolyl-tRNA synthetase [Treponema succinifaciens DSM 2489] gi|328447591|gb|AEB13307.1| Prolyl-tRNA synthetase [Treponema succinifaciens DSM 2489] Length = 603 Score = 193 bits (490), Expect = 6e-47, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 154/289 (53%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M+ S+ L+++P +A I+SH+LM+R +I + G+Y+++P G +A + II+EE Sbjct: 1 MKTSQIPFRTLRDSPSEAIISSHQLMMRADLIRKLGNGLYTYMPFGLRAYRKLEKIIKEE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +GA+E + D+W ESGR+++ G +ML+ +R + M+ PT EE T I R Sbjct: 61 IEASGAMEFKPTVIVPGDIWKESGRWETMGPQMLKAQNRQQQDMVVSPTAEEAYTAIMRQ 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SY+ LP YQI K+RDE+RPR+GVMR REF M D Y+ + E SY + Sbjct: 121 GLTSYKQLPINCYQINTKYRDEIRPRYGVMRGREFNMMDGYTLNADDESLDQSYQAYAKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 YLRIF RLGL I ++A++G +GG S EF+V ++ G+ + K + + D Sbjct: 181 YLRIFKRLGLDVITVKADTGAMGGSGSEEFMVESEIGDDTLILCKCGYAANVEKASCAKD 240 Query: 241 DIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFY 289 + ++ + T N D L + + S + I+ Sbjct: 241 IPVDIDGNPVKATEKSYEPISTPNVGTIDDLEKYLKCSKHQLLKTLIYK 289 Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 71/188 (37%), Positives = 106/188 (56%), Gaps = 5/188 (2%) Query: 259 TSDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 T+D+ K D P + + +G E+GHIF G KY+ M+ T+ +GK MG Sbjct: 412 TADLRTAKAGDICPVCGKPFYTTKGNELGHIFKLGKKYTESMNVTYLDKNGKSAVPTMGC 471 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG RV+A++IE+ HD +GIIWP S AP++++++ IK ++A +KIY L K Sbjct: 472 YGIGVDRVLASIIEAFHDDRGIIWPMSTAPYQVAIVPIKYSG-AMKEAADKIYDELLKAS 530 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 +V DD E+ G +F DL+GFP+++ VG K + + VEIK R + E + LE Sbjct: 531 VEVLLDDRDERPGVKFNDMDLIGFPVRITVGDKNLPN--VEIKMRSSEQAELVPLENAAA 588 Query: 437 YASHRFSN 444 AS Sbjct: 589 KASEIVKT 596 >gi|261837685|gb|ACX97451.1| prolyl-tRNA synthetase [Helicobacter pylori 51] Length = 577 Score = 193 bits (490), Expect = 6e-47, Method: Composition-based stats. Identities = 100/235 (42%), Positives = 135/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQVGSGIYNFLPLAKKVLDKIENATHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR D + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKDNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + M + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNMQST 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I LGL + A+SG IGG S EF+VL + GE + K+ D+ E Sbjct: 181 YKEILSDLGLDFRVVEADSGAIGGSKSKEFVVLTECGEDTIVVCKNC-DYAANIE 234 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P + + +EVGHIF G Y+ + A+F +GK+ + +MG Y Sbjct: 390 ADIVQVKESDRCPNCQGALKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E D G +W + APF + ++ D+ + ++Y RL + G Sbjct: 450 GIGISRLLSAILEQKSDNLGCVWTKNTAPFDVVIVVSNLKDEAQKKLAFEVYERLRQKGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 D DD + G++ +L+G L +IVG + + + E R ++ + E+ Sbjct: 510 DALLDDRDARFGAKMRDFELIGERLALIVGKQTLESKEFECIKRANLEKQTLKDTELEEK 569 Query: 438 ASHRFSN 444 + Sbjct: 570 ILEMLES 576 >gi|77360564|ref|YP_340139.1| prolyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125] gi|76875475|emb|CAI86696.1| prolyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125] Length = 544 Score = 193 bits (490), Expect = 6e-47, Method: Composition-based stats. Identities = 104/207 (50%), Positives = 135/207 (65%), Gaps = 1/207 (0%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 MI + + G+Y+WLP G + L V I+REE N+ AIEM +P +Q ADLW ESGR+D +G Sbjct: 1 MIRRVASGLYTWLPTGLRVLRKVENIVREEMNKANAIEMLMPVIQPADLWEESGRWDEFG 60 Query: 91 KEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVM 150 E++R DR+++ GPTHEEV+TD R I SY+ LP + YQIQ K RDE RPRFGVM Sbjct: 61 PELMRFTDRHNRTFALGPTHEEVITDFVRKEISSYKQLPISLYQIQTKVRDERRPRFGVM 120 Query: 151 RSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEF 210 R+REF MKDAYSF L+ E +Y M +Y IF RL L P+ A++G IGG +SHEF Sbjct: 121 RAREFTMKDAYSFHLSDECLDATYQVMHKAYCNIFERLNLDYRPVIADTGSIGGSVSHEF 180 Query: 211 IVLADTGETQVFCSKDFMDFPIPSENT 237 VLA++GE + S D+ E Sbjct: 181 HVLAESGEDAIAFSD-GSDYAANIEKA 206 Score = 166 bits (421), Expect = 6e-39, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 99/189 (52%), Gaps = 3/189 (1%) Query: 258 ATSDVHNEKLFDS--LPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMG 315 +D+ N D+ + RGIEVGHIF GTKYS M A GK+ + MG Sbjct: 355 EVADIRNIVEGDASPCGQGTLQIKRGIEVGHIFQLGTKYSQAMKAGVLNESGKNQIMTMG 414 Query: 316 SYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLSK 374 YGIG R+VAA IE ++D GIIWP +APF ++++ + D +Y L Sbjct: 415 CYGIGVSRIVAAAIEQNNDQYGIIWPQPIAPFDLAIVPMNMHKSHRIPDIATNLYQGLKD 474 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 G DV +DD E+ G F +L+G P +++G + + ++KVE+K+R TG + + ++ Sbjct: 475 AGLDVLFDDRKERPGVMFNDMELIGVPFTLVIGERNLDENKVELKNRRTGEKLMIDIDTA 534 Query: 435 INYASHRFS 443 I+ Sbjct: 535 IDAIKAAVK 543 >gi|260886940|ref|ZP_05898203.1| proline--tRNA ligase [Selenomonas sputigena ATCC 35185] gi|260863002|gb|EEX77502.1| proline--tRNA ligase [Selenomonas sputigena ATCC 35185] Length = 543 Score = 193 bits (490), Expect = 6e-47, Method: Composition-based stats. Identities = 103/251 (41%), Positives = 152/251 (60%), Gaps = 4/251 (1%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 MLR GMI + + G+Y++LPL + + + IIREE + G E+ +P +Q A++W ESGR Sbjct: 1 MLRAGMIRKAAGGVYTYLPLAWRTIKKIEQIIREEMDAAGGQELCMPIMQPAEIWQESGR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 + +G+EM RL D + + GPTHEE++T + R ++SY+ LP YQIQ K+RDE+RP Sbjct: 61 WSVFGQEMFRLKDCHGREFCLGPTHEEMITTLVRDEVRSYKQLPLLLYQIQNKYRDEIRP 120 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 RFG+MRSREF+MKD YSFD G+ SY KM+ +Y +F R GLK P+ A++G IGG+ Sbjct: 121 RFGLMRSREFIMKDLYSFDKDEAGADISYKKMYDAYTNVFTRCGLKFRPVEADAGAIGGN 180 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF---DDIISLNSIVEQWTAPYAATSDV 262 +HEF VLA GE+++ C D+ E + D +++ P T ++ Sbjct: 181 HTHEFTVLAAAGESEIACCTAC-DYAANVEKAELLPIDASEEEAQPLKKVETPACKTIEL 239 Query: 263 HNEKLFDSLPE 273 + L L Sbjct: 240 VADFLRVPLER 250 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 64/188 (34%), Positives = 99/188 (52%), Gaps = 2/188 (1%) Query: 259 TSDVHNEKLFDSLPEN--KRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 T+D+ D P RGIE G +F GTKYS + ATF +GK+ + MG Sbjct: 355 TADIRLMAAGDPCPHCGAPVEITRGIEAGQVFKLGTKYSEALGATFLDENGKEKALFMGC 414 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG 376 YGIG R +AA IE +D GIIWP ++AP+++ ++ + A E++Y L G Sbjct: 415 YGIGVGRTMAAAIEQHNDEHGIIWPRAIAPYEVVVVPVNAKASEQLALAEEVYEMLLAAG 474 Query: 377 CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVIN 436 D DD ++ G +F ADL+G+PL++ +G K + + K+E+K R +G D + E + Sbjct: 475 VDAILDDRKDRAGVKFKDADLIGYPLRITIGPKALEEGKIELKVRRSGESCDCTKAECLA 534 Query: 437 YASHRFSN 444 + Sbjct: 535 KVQELLKD 542 >gi|226293450|gb|EEH48870.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18] Length = 738 Score = 193 bits (490), Expect = 6e-47, Method: Composition-based stats. Identities = 74/475 (15%), Positives = 146/475 (30%), Gaps = 62/475 (13%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ + L L+E R+ + L + S G LP G K ++ + +++R E Sbjct: 291 KQMQEHLKFLEEAEKRNHLRIGKEQDLF--FFDEVSPGCPFLLPNGTKIINALQSLLRAE 348 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + +W +SG + Y +M +L D + P + +F Sbjct: 349 YRKRGYQEVQSPNMYDVGIWRQSGHWAHYKDDMFKL-DVEKREWALKPMNCPGHAVMFGH 407 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SYR LP + R+E G+ R R+F D + F + + + +F Sbjct: 408 RERSYRELPLRIADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTEDQIMQE-IDGLFD 466 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G ++ + P E ++ Sbjct: 467 FLRSVYGLFGFSF-KLKLSTRPEKYMGKLE-----------------TWNYAEEQLRAAL 508 Query: 240 DDIISLNSIV-EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYF----GT 292 + V E A Y D+ + D+L + + ++ F G Sbjct: 509 TKFKGNDWEVDEGDGAFYGPKIDI---TIQDALKREFQCATIQLDYQMPVNFKLEYMTGE 565 Query: 293 KYSLPMSATFKGA----------------DGKDHYVQMGSYGIGAM-RVVAAVIESSHDG 335 + A G+ V + IG+ R + +IE Sbjct: 566 TGAKAKPADKTTEDAANPDAPSTSSNEPGPGRARPVVIHRAIIGSFERFLGIIIEHFGGK 625 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 + + D E++ L +V D G + + Sbjct: 626 WPFWLSPRQILIVPVMPAVN-------DYVEELREILRGDKLNVDIDISGNTMQKKIRSG 678 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED----MSLEEVINYASHRFSNNR 446 + + +VG++ + V I++R + + LEE R Sbjct: 679 QIAQYNFIFVVGAQEKATRTVNIRNRDDPSSQVKGSLVPLEEARVKLRALRKERR 733 >gi|229820470|ref|YP_002881996.1| threonyl-tRNA synthetase [Beutenbergia cavernae DSM 12333] gi|229566383|gb|ACQ80234.1| threonyl-tRNA synthetase [Beutenbergia cavernae DSM 12333] Length = 671 Score = 193 bits (489), Expect = 6e-47, Method: Composition-based stats. Identities = 59/434 (13%), Positives = 123/434 (28%), Gaps = 49/434 (11%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + RD +L L + + G+ + P G + R G Sbjct: 256 EAERRDHRRLGSELDLFSV-PEEIGSGLAVFHPKGSVIRMEMEDYSRRRHVEAGYDFAYT 314 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLAD------------RNDKAMIYGPTHEEVMTDIFR 119 P + A L+ S + Y M R + P + + +F Sbjct: 315 PHITKAHLFETSRHLEWYADGMYPPMQLDAEHHEDGTLKREGQDYYLKPMNCPMHNLVFA 374 Query: 120 SHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMF 178 + +SYR LP ++ +R E G+ R+R F DA+ + + + Sbjct: 375 ARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTREQMRDEL-ASLL 433 Query: 179 VSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTD 238 L + GL+ + + D + Sbjct: 434 TFVLDLLRDYGLEEFYLELSTRDPEKS----------------VGDDATWDEATATLRDV 477 Query: 239 FDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPM 298 A Y + + D++ + ++S ++ F G Sbjct: 478 ATASGLELVDDPGGAAFYGPKI---SVQARDAIGRSWQLSTIQLDF---FEPGL-----F 526 Query: 299 SATFKGADGKDHYV-QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAH 357 + +DG + G++ A++ + P +AP ++ + + Sbjct: 527 DLEYTASDGSRQQPVMIHRALFGSIERFFAILL---EHYAGAMPPWLAPVQVRAVPVA-- 581 Query: 358 DQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVE 417 + + A+L DD ++ + A P +I G + V Sbjct: 582 -EPFNAYLADVVAQLRAASVRAELDDGDDRFNKKIRTATTQKIPFVLIAGGEDAEAGAVS 640 Query: 418 IKHRLTGIREDMSL 431 ++R R + + Sbjct: 641 FRYRDGTQRNGVPV 654 >gi|217974767|ref|YP_002359518.1| tRNA synthetase class II [Shewanella baltica OS223] gi|217499902|gb|ACK48095.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS223] Length = 398 Score = 193 bits (489), Expect = 7e-47, Method: Composition-based stats. Identities = 66/429 (15%), Positives = 136/429 (31%), Gaps = 40/429 (9%) Query: 18 AEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSA 77 + +L L + G+ W P G ++ +R R G E++ P Sbjct: 4 HREIAEQLDLF--HSEPQAPGMIFWHPNGWVLFRDIQEHMRRVYRRNGFEEVNTPVFMKK 61 Query: 78 DLWVESGRYDSYGKEMLRLADRNDK-AMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 +LW SG D + + M + + + P +F+ + S+R+LP ++ Sbjct: 62 ELWQTSGHMDMFAENMFFGGGKENMDEYVLKPMSCPAHILLFKRGVHSHRDLPLRLFEFG 121 Query: 137 LKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 L R+E G +R+R+F DA+ F ++ +++ G ++ + Sbjct: 122 LVHRNESSGSLNGCLRARQFTQDDAHVFCC-WSQAEEEIRGFLQRAKQVYGDYGYHNLDV 180 Query: 196 RAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP 255 + + P S E A C + D + A Sbjct: 181 KISTKPEKALGSDEQWCRAQK-LLDSACQIEGFDAEYQA----------------GEGAF 223 Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV-QM 314 Y ++ L DS+ + + F ++ + + G+ M Sbjct: 224 YGPKIEL---SLTDSMGRRWQCGTIQFD----FNLPERFDVH----YTNEQGEFERPVIM 272 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G++ ++ G W + I + ++ ++ Sbjct: 273 HQAMYGSIERWLGILLEVSQGNLPDW------LHPVPVAIASVNESNSQFVRQLATLCLA 326 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 V D + + P + VG K ++ V +K R G+ + L E+ Sbjct: 327 RDMRVLVDISQNSVARKMKRFHKQKVPYILTVGDKEEAEKCVSVKCRKDGVMTHIPLAEL 386 Query: 435 INYASHRFS 443 NY + + Sbjct: 387 ANYLADKLE 395 >gi|225684056|gb|EEH22340.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03] Length = 738 Score = 193 bits (489), Expect = 7e-47, Method: Composition-based stats. Identities = 74/475 (15%), Positives = 146/475 (30%), Gaps = 62/475 (13%) Query: 2 RRSKYFLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 ++ + L L+E R+ + L + S G LP G K ++ + +++R E Sbjct: 291 KQMQEHLKFLEEAEKRNHLRIGKEQDLF--FFDEVSPGCPFLLPNGTKIINALQSLLRAE 348 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + G E+ P + +W +SG + Y +M +L D + P + +F Sbjct: 349 YRKRGYQEVQSPNMYDVGIWRQSGHWAHYKDDMFKL-DVEKREWALKPMNCPGHAVMFGH 407 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFV 179 +SYR LP + R+E G+ R R+F D + F + + + +F Sbjct: 408 RERSYRELPLRIADFGVLHRNEASGALHGLTRVRKFQQDDTHIFCTEDQIMQE-IDGLFD 466 Query: 180 SYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDF 239 ++ G ++ + P E ++ Sbjct: 467 FLRSVYGLFGFSF-KLKLSTRPEKYMGKLE-----------------TWNYAEEQLRAAL 508 Query: 240 DDIISLNSIV-EQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYF----GT 292 + V E A Y D+ + D+L + + ++ F G Sbjct: 509 TKFKGNDWEVDEGDGAFYGPKIDI---TIQDALKREFQCATIQLDYQMPVNFKLEYMTGE 565 Query: 293 KYSLPMSATFKGA----------------DGKDHYVQMGSYGIGAM-RVVAAVIESSHDG 335 + A G+ V + IG+ R + +IE Sbjct: 566 TGAKAKPADKTTEDAANPDAPSTSSNEPGPGRARPVVIHRAIIGSFERFLGIIIEHFGGK 625 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 + + D E++ L +V D G + + Sbjct: 626 WPFWLSPRQILIVPVMPAVN-------DYVEELREILRGDKLNVDIDISGNTMQKKIRSG 678 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED----MSLEEVINYASHRFSNNR 446 + + +VG++ + V I++R + + LEE R Sbjct: 679 QIAQYNFIFVVGAQEKATRTVNIRNRDDPSSQVKGSLVPLEEARVKLRALRKERR 733 >gi|304410724|ref|ZP_07392342.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS183] gi|307304819|ref|ZP_07584569.1| tRNA synthetase class II (G H P and S) [Shewanella baltica BA175] gi|304351208|gb|EFM15608.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS183] gi|306912221|gb|EFN42645.1| tRNA synthetase class II (G H P and S) [Shewanella baltica BA175] Length = 403 Score = 193 bits (489), Expect = 7e-47, Method: Composition-based stats. Identities = 66/429 (15%), Positives = 136/429 (31%), Gaps = 40/429 (9%) Query: 18 AEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSA 77 + +L L + G+ W P G ++ +R R G E++ P Sbjct: 4 HREIAEQLDLF--HSEPQAPGMIFWHPNGWALFRDIQEHMRRVYRRNGFEEVNTPVFMKK 61 Query: 78 DLWVESGRYDSYGKEMLRLADRND-KAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQ 136 +LW SG D + + M + + + P +F+ + S+R+LP ++ Sbjct: 62 ELWQTSGHMDMFAENMFFGGGKENIDEYVLKPMSCPAHILLFKRGVHSHRDLPLRLFEFG 121 Query: 137 LKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPM 195 L R+E G +R+R+F DA+ F ++ +++ G ++ + Sbjct: 122 LVHRNESSGSLNGCLRARQFTQDDAHVFCC-WSQAEEEIRGFLQRAKQVYGDYGYHNLDV 180 Query: 196 RAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAP 255 + + P S E A C + D + A Sbjct: 181 KISTKPEKALGSDEQWCRAQK-LLDSACQIEGFDAEYQA----------------GEGAF 223 Query: 256 YAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV-QM 314 Y ++ L DS+ + + F ++ + G+ M Sbjct: 224 YGPKIEL---SLTDSMGRRWQCGTIQFD----FNLPERFD----VQYANEQGEFERPVIM 272 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSK 374 G++ ++ G W + I + ++ ++ A Sbjct: 273 HQAMYGSIERWLGILLEVSQGNLPDW------LHPVPVAIASVNESNSQFVRQLAALCLA 326 Query: 375 VGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEV 434 V D + + P + VG K ++ V +K R G+ + L E+ Sbjct: 327 RDMRVLVDISQNSVARKMKRFHKQKVPYILTVGDKEEAEKCVSVKCRKDGVITHVPLSEL 386 Query: 435 INYASHRFS 443 +Y + + Sbjct: 387 CDYLADKLE 395 >gi|39942942|ref|XP_361008.1| conserved hypothetical protein [Magnaporthe oryzae 70-15] gi|58257459|gb|AAW69351.1| threonyl-tRNA synthetase-like protein [Magnaporthe grisea] gi|145009886|gb|EDJ94542.1| conserved hypothetical protein [Magnaporthe oryzae 70-15] Length = 812 Score = 193 bits (489), Expect = 7e-47, Method: Composition-based stats. Identities = 83/499 (16%), Positives = 164/499 (32%), Gaps = 86/499 (17%) Query: 7 FLPILQEN-PRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 + L+E RD L H +S G WLP G + + + + IRE Sbjct: 321 YQKFLEEAAKRDHRRIGKDQELF--FFHDYSPGSAMWLPHGTRIYNTLLSYIREIYWEKN 378 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + +ADLW +SG + Y +M + D D P + +F +S+ Sbjct: 379 YEEVITPNIYNADLWKQSGHWQFYKDDMFVIKDEKDT-FGLKPMNCPGHALMFAHRERSH 437 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP+ + R+E G+ R R F DA+ F + +F ++ Sbjct: 438 RELPWRVADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCREDQIKDE-ILDLFDFLRKM 496 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 + +GL +R + P + E A+ + +D SE ++ + Sbjct: 497 YTVMGLTF-KLRLSTRPEKYMGAIETWDKAEESL------RQALDEFAASEGGVAWELNA 549 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSA---- 300 A Y D+ + D L + + ++ F +Y A Sbjct: 550 ------GDGAFYGPKIDI---AIMDCLNREWQCATIQLDFVQPQNFNLEYMAGEDAAETK 600 Query: 301 -------------TFKGA------------------------------------DGKDHY 311 K G Sbjct: 601 AKAEGAKITAPKVKVKDPQAIIDSAAAARGETVVEPAGVEGDKKEKEKVIKKLSPGCARP 660 Query: 312 VQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR 371 V + G++ ++ + WP ++P +I ++ + D E++ + Sbjct: 661 VMIHRAMAGSIERFTGIL---CEHYAGKWPLWLSPRQILVVPVGKG---FYDYAEEVRSI 714 Query: 372 LSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED--- 428 K V D G + + L + +VG++ ++ +V +++R +D Sbjct: 715 FKKAKMFVDVDTSGNTLMKKIRTGQLAQYNFIFVVGAEEMNGRQVNVRNRDDPATQDRGQ 774 Query: 429 -MSLEEVINYASHRFSNNR 446 ++LEE + + + +++ Sbjct: 775 PIALEEALEKLA-KLRDDK 792 >gi|114559273|ref|XP_001168878.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 6 [Pan troglodytes] Length = 684 Score = 193 bits (489), Expect = 8e-47, Method: Composition-based stats. Identities = 78/456 (17%), Positives = 130/456 (28%), Gaps = 89/456 (19%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + RD + L H+ S G +LP G + + + A IR E G E+ Sbjct: 294 REEAELRDHRRIGKEQELF--FFHELSPGSCFFLPRGTRVYNALVAFIRAEYAHRGFSEV 351 Query: 70 SVPTLQSADLWVESGRYDSYGKEML----------------RLADRNDKAMIYGPTHEEV 113 PTL S LW +SG ++ Y ++M + P + Sbjct: 352 KTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPA 411 Query: 114 MTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKH 172 +F +S+R LP R E G+ R R F DA+ F T + Sbjct: 412 HCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAE 471 Query: 173 SYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 ++ LG + P G D Sbjct: 472 -IQSCLDFLRSVYAVLGFSFRLA-LSTRPSGF-----------------LGDPCLWDQAE 512 Query: 233 PSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGT 292 + + A Y DVH L D+L + ++ F Sbjct: 513 QVLKQALKEFGEPWDLNSGDGAFYGPKIDVH---LHDALGRPHQCGTIQLD----FQLPL 565 Query: 293 KYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLI 352 ++ +KG ++PF++ +I Sbjct: 566 RFD----LQYKGPL------------------------------------WLSPFQVVVI 585 Query: 353 NIKAHDQVCRDACEKIYARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFV 411 + + + + ++ L G D D G + + A L + Q +VG K Sbjct: 586 PVGSEQE---EYAKEAQQSLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQFVVGQKEQ 642 Query: 412 SDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNRP 447 S V I+ R + L E + + P Sbjct: 643 SKRTVNIRTRDNRRLGEWDLPEAVQRLVELQNTRVP 678 >gi|329943296|ref|ZP_08292070.1| threonyl-tRNA synthetase [Chlamydophila psittaci Cal10] gi|328814843|gb|EGF84833.1| threonyl-tRNA synthetase [Chlamydophila psittaci Cal10] Length = 379 Score = 192 bits (488), Expect = 8e-47, Method: Composition-based stats. Identities = 69/409 (16%), Positives = 129/409 (31%), Gaps = 40/409 (9%) Query: 39 IYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLAD 98 + + P G D + + G E+ P L + LW SG + +Y + M L Sbjct: 1 MPFFHPRGMIIWDALIGYWKRLHQLAGYKEIQTPQLMNRSLWEVSGHWSNYRENMYTLK- 59 Query: 99 RNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLM 157 +D+ P + +++ + SY+ P +I R E+ G+MR R F Sbjct: 60 IDDEDYAIKPMNCPGCMLYYKTRLHSYKQFPLRIAEIGHVHRYEVSGALSGLMRVRAFHQ 119 Query: 158 KDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTG 217 DA+ LTPE + + ++ GL+ + + P Sbjct: 120 DDAH-VFLTPEQVEEETLNILHLVSELYSTFGLEYH-LELSTRP---------------- 161 Query: 218 ETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRV 277 E S + + + + + I A Y D+H K Sbjct: 162 EKATIGSDELWELATAALERALINSNTPFIINPGDGAFYGPKIDIHV----------KDA 211 Query: 278 SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI--GAMRVVAAVIESSHDG 335 R + G I + A G+ M + R + +IE Sbjct: 212 IQRTWQCGTI-QLDMFLPERFELEYTNAQGEKSTPVMLHRALFGSIERFLGILIEHFKGR 270 Query: 336 KGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVA 395 + + +K+ K+G V DD E + + A Sbjct: 271 FPLWLSPEHIRLITVA-------DRHQPRAQKLATAWQKLGLIVTVDDSNESVSKKIRNA 323 Query: 396 DLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSN 444 + V +G + + + + I+ R + DM+ ++ IN ++ Sbjct: 324 QNMQVNYMVTLGDREIEQNTLAIRTRDNRVLNDMTEDKFINTILEEKNS 372 >gi|109947885|ref|YP_665113.1| prolyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba] gi|123173273|sp|Q17W62|SYP_HELAH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|109715106|emb|CAK00114.1| proS [Helicobacter acinonychis str. Sheeba] Length = 577 Score = 192 bits (488), Expect = 8e-47, Method: Composition-based stats. Identities = 97/235 (41%), Positives = 135/235 (57%), Gaps = 1/235 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M SK F P L+E P+DA + SHK + + G I+Q GIY++LPL +K LD + I + Sbjct: 1 MLFSKLFAPTLKEPPKDAVLKSHKHLAQAGYIYQIGSGIYNFLPLAKKVLDKIENITHKR 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 GA + + + A LW +SGR D YGKE+L DR + PT EE +T+I + Sbjct: 61 MQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRKGNDFVLSPTLEENITEIAAN 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 IKSY+ LP YQI KFRDE+RPRFG++R+REF+MKD YSF E + + Sbjct: 121 FIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSE 235 Y I + LGL + A++G IGG S EF+VL + GE + ++ D+ E Sbjct: 181 YKEILNDLGLDFRIVEADNGAIGGSKSKEFVVLTECGEDTIVVCQNC-DYAANIE 234 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 93/187 (49%), Gaps = 2/187 (1%) Query: 260 SDVHNEKLFDSLPENKR--VSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSY 317 +D+ K D P +R + +EVGHIF Y+ + A+F +GK+ + +MG Y Sbjct: 390 ADIIQVKESDCCPNCQRALKYHKSLEVGHIFKLSQGYAKSLKASFLDKNGKEQFFEMGCY 449 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 GIG R+++A++E D G +W + APF + ++ D+V + ++Y RL + G Sbjct: 450 GIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNLKDEVQKKLAFEVYERLLQRGV 509 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 DV DD + G++ +L+G L +IVG + + + + E R ++ + E+ Sbjct: 510 DVLLDDRDVRFGAKMRDFELIGERLALIVGKQTLENKEFECIKRANLEKQTLKDRELEEK 569 Query: 438 ASHRFSN 444 + Sbjct: 570 ILEILES 576 >gi|326431769|gb|EGD77339.1| threonyl-tRNA synthetase isoform 2 [Salpingoeca sp. ATCC 50818] Length = 766 Score = 192 bits (488), Expect = 8e-47, Method: Composition-based stats. Identities = 69/441 (15%), Positives = 139/441 (31%), Gaps = 37/441 (8%) Query: 10 ILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + + RD + L S G + P G + + +RE+ G E+ Sbjct: 318 MEEAAKRDHRKIGREQQLF--FFDDLSPGSCFFEPRGARIYRTLMEFMREQYITRGFEEV 375 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P + + LW SG + Y E + + ++ P + +F +SY+ LP Sbjct: 376 VTPNIFNKRLWETSGHWQHY-AENIFSFEVENETFAMKPMNCPSHCVMFSHRNRSYKELP 434 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 + R+EL G+ R R F DA+ F + ++ Sbjct: 435 LRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCRPEQIEDE-IKGCLAFLNAVYGTF 493 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 G + P E + S D+ + Sbjct: 494 GFTYELN-LSTRPEKFLGDVE-----------------VWERAEASLAKALDEFGHEWKL 535 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A Y D+ + D+L + + + ++ F +++L K Sbjct: 536 NPGDGAFYGPKIDI---TVHDALKRSFQCATIQLD----FQLPIRFNLEYVPARKEEGVV 588 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 V + +G++ + A++ + WP ++P + ++ I E++ Sbjct: 589 YRPVIIHRAILGSVERMFAIL---CEHYAGKWPFWLSPRQAQVVPI---HPEFNKYAEEV 642 Query: 369 YARLSKVGCDVFWD-DMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRE 427 G V D D + + A + + ++VG V ++ R Sbjct: 643 RMFFHTHGFAVDVDADDSLTLQKKVRRACVEQYNFILVVGEAECKKRTVNVRTRDGSRIG 702 Query: 428 DMSLEEVINYASHRFSNNRPV 448 ++SL+E++ PV Sbjct: 703 ELSLDELLCDWKQLRDTRAPV 723 >gi|269127985|ref|YP_003301355.1| prolyl-tRNA synthetase [Thermomonospora curvata DSM 43183] gi|268312943|gb|ACY99317.1| prolyl-tRNA synthetase [Thermomonospora curvata DSM 43183] Length = 565 Score = 192 bits (488), Expect = 9e-47, Method: Composition-based stats. Identities = 94/264 (35%), Positives = 137/264 (51%), Gaps = 10/264 (3%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 MR S+++ P L+++P DAE A H+L++R G I + + G YS LP + + +IR+E Sbjct: 1 MRWSRFYAPTLRQDPADAETAGHRLLVRAGFIRRLAAGHYSLLPPAARVRSKIIEVIRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 +R GA E+ +P LQ A+LW +GR+D+ G+E RL DR G THEEV+ + Sbjct: 61 MDRIGAQEVLLPALQPAELWRRNGRWDASGEETFRLTDRKGAEAALGTTHEEVVA-SLAT 119 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 + SYR LP +YQ Q FRDE RPR G++ REF +KDAYS D + S+ + Sbjct: 120 ELGSYRRLPQLWYQFQTAFRDEARPRSGLLGLREFTLKDAYSLDADEAALEGSFQAHREA 179 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDF---MDFPIPSENT 237 Y RIF RLGL I + G S EF+ ++ G+ V D + Sbjct: 180 YRRIFQRLGLPVIEAQ------GPGGSLEFLCPSEAGDDAVVRCPACGYAADAETAASRL 233 Query: 238 DFDDIISLNSIVEQWTAPYAATSD 261 E++ P+A T + Sbjct: 234 APVTDGPGPEKPERFDTPHAKTIE 257 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 2/192 (1%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSARG--IEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A +D+ + + P + IEV H+ G + + + A G DG + Sbjct: 374 AVTAWADLRRARAGEPCPSCGQALETTPAIEVAHLRKPGRRCTEALGARVLGPDGTEITP 433 Query: 313 QMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARL 372 MG Y IG R +AA+ E+ HD G+ WP +APF +++ + D A E+IY L Sbjct: 434 LMGRYSIGVERAIAAIAETGHDDSGLRWPAGIAPFDVAVTLLDPRDDQVTAAAEQIYTAL 493 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 + G + DD E+ G++FA +L+G P +V VG + + VEIK R TG + + + Sbjct: 494 AAAGVETILDDRDERPGAKFADTELIGIPYRVTVGKRGLKSGTVEIKTRATGRTDTVPIP 553 Query: 433 EVINYASHRFSN 444 E + + Sbjct: 554 EAAARVTALLKS 565 >gi|149238003|ref|XP_001524878.1| threonyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239] gi|146451475|gb|EDK45731.1| threonyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239] Length = 754 Score = 192 bits (488), Expect = 9e-47, Method: Composition-based stats. Identities = 77/452 (17%), Positives = 158/452 (34%), Gaps = 45/452 (9%) Query: 3 RSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQN 62 +++ + + RD + L + ++ S G WLP G + + + +R E Sbjct: 332 MTEHLKFLAEAAERDHRKIGREQELF--IFNEVSPGSAMWLPHGTRIYNTLVDTLRYEYR 389 Query: 63 RTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHI 122 + G E+ P + S LW SG + +Y + M + P + +F+S Sbjct: 390 KRGYEEVITPNMYSTKLWETSGHWQNYKENMFSFEVEKET-FGLKPMNCPGHCVLFKSRE 448 Query: 123 KSYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSY 181 +SYR LP+ + R+E G+ R R F DA+ F T + Sbjct: 449 RSYRELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTTEQ------------- 495 Query: 182 LRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDD 241 +G + + + G EF + T + + + D+ Sbjct: 496 ------IGTEIAGVFDLLKKMYGIFGFEFKMELSTRPEKYVGDLETWNSAEEKLANALDE 549 Query: 242 I--ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMS 299 + A Y D+ + D+L + + ++ F +++ L Sbjct: 550 FLGKGKWELNPGDGAFYGPKIDIM---ISDALKRWFQCATIQLD----FQLPSRFELEYR 602 Query: 300 ATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQ 359 A + V + +G++ + A++ + WP ++P +I ++ + Sbjct: 603 TDSNNA--LERPVMIHRAILGSVERMTAILT---EHYKGKWPFWLSPRQILIVPVGPK-- 655 Query: 360 VCRDACEKIYARLSKVG-CDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 + EK+ L+ D G + + +L + IVG ++ V I Sbjct: 656 -YYEYGEKLQKLLNNEHFFYCDIDVSGNTLPKKVRSGQMLKYNFIFIVGEAEEQNNSVNI 714 Query: 419 KHRL----TGIREDMSLEEVINYASHRFSNNR 446 ++R G E + +++VI + R Sbjct: 715 RNRDIPEEQGKNEMVKVDDVIKQLINLRDEKR 746 >gi|256545377|ref|ZP_05472740.1| proline--tRNA ligase [Anaerococcus vaginalis ATCC 51170] gi|256398938|gb|EEU12552.1| proline--tRNA ligase [Anaerococcus vaginalis ATCC 51170] Length = 565 Score = 192 bits (488), Expect = 9e-47, Method: Composition-based stats. Identities = 100/225 (44%), Positives = 152/225 (67%) Query: 8 LPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 +P L+++P+DAE SHKL++R I + S G+YS+LPLG K ++ + I+R+ + +I Sbjct: 1 MPTLRDDPQDAETQSHKLLVRGAFIRKTSSGVYSYLPLGMKVINKIENIVRKSMEKYDSI 60 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 E+S LQS D+W +SGR+ ++G EM ++ DR+D+ GPT EE T++ + + SY+ Sbjct: 61 EVSTSVLQSKDIWEKSGRWQNFGPEMFKIKDRHDREFCLGPTAEEQFTNLIKDELNSYKQ 120 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 LP YQI KFRDE RPRFG+ RSR+F+MKDAYSFD+ EG K SY KM+ +Y+ +F Sbjct: 121 LPLNLYQIVSKFRDEKRPRFGINRSRDFIMKDAYSFDVDMEGLKKSYQKMWDAYVEVFDA 180 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPI 232 L L + +SG +GG++SHEF+ LA+TGE ++F +++ Sbjct: 181 LDLDYKIVEGDSGAMGGNISHEFMALAETGEGEIFYTENSNYAAT 225 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 66/174 (37%), Positives = 92/174 (52%), Gaps = 1/174 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 + K ARGIEVG+IF GTKYS + A F +GK MGSYGIG R ++A+IE Sbjct: 390 GKEKLQLARGIEVGNIFQLGTKYSESLEAYFLDENGKQKPFIMGSYGIGITRSISAIIEQ 449 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 +D GIIWP VAPF+ + + +++ ++ EKIY +L G +V DD E+ G + Sbjct: 450 HYDENGIIWPTKVAPFEAWITLVNKNNEEQKEIAEKIYNKLLDAGIEVMLDDRKERAGVK 509 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 F DL+G P ++ VG K D VE R M +E I ++ Sbjct: 510 FNDRDLVGVPYRITVG-KDAKDDMVEFSKRSDMENLKMPTDEAIEKIISSIKDD 562 >gi|315222088|ref|ZP_07863998.1| prolyl-tRNA synthetase [Streptococcus anginosus F0211] gi|315188838|gb|EFU22543.1| prolyl-tRNA synthetase [Streptococcus anginosus F0211] Length = 619 Score = 192 bits (488), Expect = 9e-47, Method: Composition-based stats. Identities = 96/212 (45%), Positives = 136/212 (64%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LMLR G + Q S G+YS+LPL + ++ I+REE Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMLRAGYVRQISAGVYSYLPLANRVIEKAKKIMREE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L SADLW ESGRY++YG+++ +L +R I GPTHEE T I R Sbjct: 61 FEKIGAVEMLAPALLSADLWRESGRYETYGEDLYKLKNREGSDFILGPTHEETFTAIVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF + +Y++ + Sbjct: 121 SVKSYKQLPLNLYQIQAKYRDEKRPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKTA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 Y IF R ++ + + G +GG S EF+ Sbjct: 181 YENIFTRSEIEFKGIIGDGGAMGGKDSQEFMA 212 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 16/207 (7%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ + + P+ + V RGIE+GHIF GT+YS M+AT +G+ V Sbjct: 414 FTAEYVDIREVREGEVSPDGQGVLKFARGIEIGHIFKLGTRYSESMNATVLDENGRAVPV 473 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AV+E GI +P +APF + LI + D+ Sbjct: 474 VMGCYGIGVSRLLSAVMEQHARLFVNKTPKGDYRYAWGINFPKELAPFDVHLIPVNVKDE 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 E++ A L K G +V DD E+ G +F+ +DL+G P++V VG K +D VE+K Sbjct: 534 EALVLTEQLEAELVKAGYEVLTDDRNERAGVKFSDSDLIGLPIRVTVGKK-AADRIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + TG ++ ++ ++ + ++ Sbjct: 593 IKATGDTIEVHVDNLLETLAILTKKDK 619 >gi|227486766|ref|ZP_03917082.1| proline--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] gi|227235236|gb|EEI85251.1| proline--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] Length = 563 Score = 192 bits (488), Expect = 1e-46, Method: Composition-based stats. Identities = 96/219 (43%), Positives = 144/219 (65%) Query: 8 LPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAI 67 +P L+E+P DAE ASHKL++R I Q + GIYS+LPLG+K L+ + AI+R+ + GAI Sbjct: 1 MPTLREDPVDAETASHKLLVRGAFIRQQASGIYSFLPLGKKVLNKIEAIVRDAMDSYGAI 60 Query: 68 EMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRN 127 E++ LQ +W +S R++++G EM +L DR+++ GPT EE D+ + + SY+ Sbjct: 61 EVATSILQPRQIWDKSTRWETFGPEMFKLKDRHEREYALGPTAEEAFVDLIKDELNSYKQ 120 Query: 128 LPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHR 187 LP YQI KFRDE RPRFG+ RSR+FLMKDAY+FD G + +Y M+ SY F + Sbjct: 121 LPVNLYQIVDKFRDEKRPRFGINRSRDFLMKDAYTFDEDQAGLEKAYMNMWESYEYAFDK 180 Query: 188 LGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKD 226 + L + ++G +GG SHEFI L+++GE + +++ Sbjct: 181 MKLDYKIVEGDTGAMGGHKSHEFIALSESGEGVILYTEN 219 Score = 149 bits (377), Expect = 7e-34, Method: Composition-based stats. Identities = 72/174 (41%), Positives = 95/174 (54%), Gaps = 1/174 (0%) Query: 272 PENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIES 331 SARGIEVG+IF GTKYS + ATF +G Y +MGSYGIG R ++A++E Sbjct: 388 GSGTYKSARGIEVGNIFQLGTKYSKALDATFLDQNGVSKYFEMGSYGIGISRSISAIVEQ 447 Query: 332 SHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQ 391 HD KGIIWP SVAPF++ + IK +D+ E IY +L DV DD E+ G + Sbjct: 448 YHDDKGIIWPTSVAPFEVIITLIKPNDEDQAKLAEDIYKKLKARRIDVVLDDRKERPGVK 507 Query: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 F DL+G P ++ VG K DS VE R +++ E IN + Sbjct: 508 FNDRDLIGIPYRITVG-KDAKDSIVEYSTRAEMENKNIDANEAINLVCENIQKD 560 >gi|47459403|ref|YP_016265.1| threonyl-tRNA synthetase [Mycoplasma mobile 163K] gi|47458733|gb|AAT28054.1| threonyl-tRNA synthetase [Mycoplasma mobile 163K] Length = 579 Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats. Identities = 64/434 (14%), Positives = 137/434 (31%), Gaps = 30/434 (6%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSK-GIYSWLPLGQKALDNVNAIIREEQNRT 64 +L +L+E RD + L L M S G WL G K + + + E +R Sbjct: 169 YLDLLKERKERDHRTIAKNLDLF--MFSPLSGLGFPIWLENGMKIKNAIMKTVLELDDRY 226 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G E+ P + L+ SG + Y +M ++ +I P IF S + S Sbjct: 227 GFDEVHTPIVGEQKLYETSGHWAHYKDDMYPPIKVENENLILRPMTCPHHILIFNSRLYS 286 Query: 125 YRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 YR+LP F + FR E L + ++ Sbjct: 287 YRDLPKRFSEQSWLFRHEKSGALTGFERVRALQLTEGHIFARKSQIVDEFKHLYKMINEA 346 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 G+K + F + + + + T ++ Sbjct: 347 LSIFGIKIDYVS-------------FSRRDPKDKEKFYQDDKLWETAEKDLETVLKELKI 393 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 + A Y D + L +S ++ F K+ + ++ Sbjct: 394 EYKEMIGEAAFYGPKIDFQVRTV---LNHEITMSTLQLD----FLLPEKFDM----SYVN 442 Query: 305 ADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDA 364 + + + G + + + ++P +AP + ++ + +D++ + Sbjct: 443 ENNEREKPVLIHR--GLIGTYERFLSILLEQNKGVFPFWLAPKQFAIAVVNPNDKMQIEY 500 Query: 365 CEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTG 424 + +Y L V++D+ E++ + A + ++G + + I+ Sbjct: 501 ADSVYKTLKSKKFHVYFDNRDERLSKKIREAQISKTKYIFVIGEEEAKTKTITIRAYGEE 560 Query: 425 IREDMSLEEVINYA 438 ++E + Sbjct: 561 STTTSTIENFLKNL 574 >gi|221124302|ref|XP_002161215.1| PREDICTED: hypothetical protein [Hydra magnipapillata] Length = 587 Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats. Identities = 106/211 (50%), Positives = 141/211 (66%), Gaps = 1/211 (0%) Query: 27 LRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRY 86 +R GMI + GIY+++P+G + + V AI+REE NR GA+E+++P +Q A+LW E+GR+ Sbjct: 1 MRAGMIKKLGAGIYNYMPMGLRVIRKVEAIVREEMNRAGAVELTMPVIQPAELWQETGRF 60 Query: 87 DSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPR 146 D G E+LR+ DR+++ + PT EEV+TDI R IKSY+ LP YQIQ KFRDE RPR Sbjct: 61 DKMGPELLRIKDRHERDYVVQPTSEEVVTDIARQEIKSYKQLPKNLYQIQTKFRDERRPR 120 Query: 147 FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDL 206 FG+MR REF+MKDAYSFD + +K SY M +Y RIF R GL + A+SG IGGDL Sbjct: 121 FGLMRGREFIMKDAYSFDRDQDSAKASYQVMAKAYRRIFDRFGLTYRAVAADSGAIGGDL 180 Query: 207 SHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 S EF V+A TGE + D+ E Sbjct: 181 SEEFQVIAATGEDAIVYCPT-SDYAANMEKA 210 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 75/188 (39%), Positives = 107/188 (56%), Gaps = 3/188 (1%) Query: 259 TSDVHNEKLFDSLPENKRV--SARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGS 316 +D+ N D+ P+ K V RGIEVGH+FY GTKYS M+ATF +GK +++MG Sbjct: 366 VADLRNVVEGDASPDGKGVLAIERGIEVGHVFYLGTKYSKAMNATFLDVNGKPQFMEMGC 425 Query: 317 YGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHD-QVCRDACEKIYARLSKV 375 YGIG R+ AA IE +HD KGIIWPD++APF + L I + A +K+Y L Sbjct: 426 YGIGITRLPAAAIEQNHDDKGIIWPDALAPFTVVLCPINPDRFPDVKAAADKLYEELLSA 485 Query: 376 GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVI 435 G DV DD E+ G+ FA +L+G P +V +G + + + VE +HR + + E+ Sbjct: 486 GVDVILDDRNERPGAMFADWELIGVPHRVNIGDRGLKEGVVEYQHRRESAATSVPVAEIA 545 Query: 436 NYASHRFS 443 + R Sbjct: 546 SLLLGRLK 553 >gi|238061935|ref|ZP_04606644.1| prolyl-tRNA synthetase [Micromonospora sp. ATCC 39149] gi|237883746|gb|EEP72574.1| prolyl-tRNA synthetase [Micromonospora sp. ATCC 39149] Length = 582 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 97/232 (41%), Positives = 132/232 (56%), Gaps = 1/232 (0%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 L L+E+P DAE+ SH+L+LR G I + + G Y+WLPLG+ LD V ++R E G Sbjct: 1 MLLRTLREDPADAEVPSHRLLLRAGYIRRAAPGGYTWLPLGKLVLDRVTDVVRGEMTAIG 60 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L A+ + SGR+ YG ++ LADR + PTHEE+ + + SY Sbjct: 61 DQEVHFPALLPAEPYRTSGRWTEYGDDIFTLADRRGAEHLLAPTHEELAALLVKDLFTSY 120 Query: 126 RNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 R+ P T +Q+Q KFRDE RPR G++R REFLMKDAYSFDL G +Y + +Y RIF Sbjct: 121 RDFPVTLFQVQTKFRDEARPRAGLLRGREFLMKDAYSFDLDDAGLTAAYERHRAAYQRIF 180 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 +LGL+ +RA SG +GG S EF+ GE D +E Sbjct: 181 DQLGLEYAVVRATSGAMGGSASEEFLAATQVGEDTFVGCTAC-DHAANTEAV 231 Score = 136 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 4/183 (2%) Query: 260 SDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGI 319 ++V + RGIEVGHIF G +Y+ + G GK MG YGI Sbjct: 394 AEVRPGDPCSACGVGTLTMRRGIEVGHIFQLGRRYTDAFTVDVLGPAGKPVRPTMGCYGI 453 Query: 320 GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDV 379 G R VAA+ E HD +G++WP +VAP + L+ DA + RL+ G V Sbjct: 454 GVSRAVAAIAEQHHDERGLVWPAAVAPCDVHLVAAGKG--PQLDAALDLGTRLAAAGLRV 511 Query: 380 FWDDMGE-QIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYA 438 DD G +F A+L+G P V+VG + ++D VE++ R TG R ++ + +++ Sbjct: 512 LVDDRTHVSAGVKFTDAELIGLPRAVVVGRR-LADGYVELRDRATGERTELPVAGLVDRL 570 Query: 439 SHR 441 Sbjct: 571 RDE 573 >gi|27820035|gb|AAO25049.1| GM03563p [Drosophila melanogaster] Length = 458 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 133/463 (28%), Positives = 213/463 (46%), Gaps = 48/463 (10%) Query: 2 RRSKYFLPILQENPRDAEI-------ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVN 54 + S+ F P L P++A + S KL+ G + S G Y +P+ Q+++D Sbjct: 3 KASRIFCPALI-TPKNAVVKQTEQLSRSQKLLTELGFVKSGSNGTYQIMPMAQRSVDKCI 61 Query: 55 AIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM 114 +++ + G ++++P L LW ++GR D E + DR+ K + PTHEE + Sbjct: 62 DLVQSNMQQAGGQKITLPILTPTGLWKKTGRLDGDISEFYMVRDRSGKQFLMSPTHEEAV 121 Query: 115 T-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 T + + SYR LP +QI KFRDEL+ RFG+MR++EFLMKD YSFD++ E + + Sbjct: 122 TAMLATTSPISYRQLPLRLFQIGPKFRDELKTRFGLMRAKEFLMKDMYSFDVSEETAMET 181 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y + +Y R+F +L + + + A +G +GG +SHE+ ++ GE + Sbjct: 182 YTVVNAAYDRLFKQLEVPFVKVNAATGIMGGSVSHEYHYVSPVGEDNLLQCSSC------ 235 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 + V S + RG+EV H F G K Sbjct: 236 --------------------GFAGNSEVVKAPASCPSCNSSDLKEVRGVEVAHTFLLGDK 275 Query: 294 YSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 YS P+ ATF GK + MG YGIG RV+AA +E + WP +AP+ + LI Sbjct: 276 YSKPLGATFLNTSGKPQSLVMGCYGIGITRVIAAALEVLSSDHELRWPKLLAPYDVCLIG 335 Query: 354 IKAHDQVCRDACEKIYARLSKVGC-------DVFWDDMGE-QIGSQFAVADLLGFPLQVI 405 K + + E I L + ++ DD E IG + A LG PL ++ Sbjct: 336 PKQGSKEQPE-AEVIENELL-LNVGEICGHQELLHDDRKELTIGKRLLEAKRLGHPLTIV 393 Query: 406 VGSKF--VSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 VG+K + K+E+ G ++ E + + + + Sbjct: 394 VGAKSARLDSPKLEVHT-SKGETYELDFSETLKLVAEHSQHKK 435 >gi|240047776|ref|YP_002961164.1| threonyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581] gi|239985348|emb|CAT05361.1| Threonyl-tRNA synthetase [Mycoplasma conjunctivae] Length = 578 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 73/439 (16%), Positives = 133/439 (30%), Gaps = 33/439 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 FL +L+E RD +L + T G WL G K + + I R Sbjct: 169 NSFLALLEERKERDHRKIGKELKIFT-FTKWFGLGFPVWLENGMKIHNKIKDKILAFDKR 227 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIK 123 G E+ P L+ SG Y +M +I P +F Sbjct: 228 YGFREVLTPHFGEKHLYETSGHLAHYRDDMFEPIKAESDYLIPRPMTCPHHIVLFDKAQC 287 Query: 124 SYRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 SYR LP+ + +R E G+ R R + + + F + + L Sbjct: 288 SYRQLPYRISEQSRLYRFEKSGALTGLERVRSMDLTEGHIFVSRKQIFDECKH------L 341 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 L ++ + + D + + D Sbjct: 342 FTMIEEVLDFFEIKIDYISFSRRDPEDKSKFYD--------DEQMWNDAENDLKKFLDSH 393 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y D ++ +L + +S ++ F + F Sbjct: 394 NVKYVEKIGEAAFYGPKIDF---QIKTALNKEITISTLQLD----FLLP----KKFNIYF 442 Query: 303 KGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCR 362 + + + G + I + + P ++P ++S+I I Sbjct: 443 NNENNEKETPVLIHR--GLIGTYERFISILLEQTKGVLPFWLSPKQVSVIPILPKHD--- 497 Query: 363 DACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRL 422 D E + + L+K +V D E+I + A + Q+I+G V + K+ + Sbjct: 498 DYAEFVRSELAKNNFEVEVDTRDERITKKIREAQIQKVKYQLIIGDSEVENQKITYREYG 557 Query: 423 TGIREDMSLEEVINYASHR 441 SL+E I + + Sbjct: 558 KQESTTTSLDEFIKLLNSQ 576 >gi|195375658|ref|XP_002046617.1| GJ12980 [Drosophila virilis] gi|194153775|gb|EDW68959.1| GJ12980 [Drosophila virilis] Length = 464 Score = 191 bits (486), Expect = 2e-46, Method: Composition-based stats. Identities = 137/460 (29%), Positives = 222/460 (48%), Gaps = 40/460 (8%) Query: 2 RRSKYFLPILQENPRDAEI-------ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVN 54 + S+ F P+L P++A + S KL++ G+I S G Y +P+ Q+ +D Sbjct: 3 KASRLFWPVLI-TPKNAVVKQTEQLSRSQKLLMELGLIKSGSNGTYQIMPIAQRVVDKCI 61 Query: 55 AIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM 114 ++++ G ++S+P L A LW ++GR + E + DR+ K + PTHEE + Sbjct: 62 SLVQRNMQEAGGQKISLPVLTPAQLWKKTGRLEGDISEFYMVRDRSGKQFLMSPTHEEAV 121 Query: 115 T-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 T + + SYR LP YQI KFRDEL+ RFG+MR++EFLMKD Y+FD++ E ++ + Sbjct: 122 TAMLATAAPISYRQLPLRLYQIGPKFRDELKSRFGLMRAKEFLMKDMYTFDVSKEAAECT 181 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y + +Y R F +L + + + A +G +GG LSHE+ ++ GE + + Sbjct: 182 YATVSDAYERFFRQLEVPFVKVEAATGIMGGSLSHEYHYISPVGEDTLLNCSAC-GYAGN 240 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 +E SD S + RG+EV H F G K Sbjct: 241 AEVLG---------------------SDAETASTCPSCQSTQLSRVRGVEVAHTFLLGDK 279 Query: 294 YSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 YS P+ ATF GK +QMG YG+G RV+AA +E + + WP +AP+ + LI Sbjct: 280 YSKPLGATFLNKSGKPETLQMGCYGVGITRVIAAALEVLSTEQELRWPKLLAPYDVCLIG 339 Query: 354 IKAHDQVCRDACEKIYARLSKV-----GCDVFW-DDMGE-QIGSQFAVADLLGFPLQVIV 406 K + E++ L + G + D+ E IG + A LG PL ++V Sbjct: 340 PKQGSKEQAPV-ERLENELLQQLTQICGAEQLLHDERKELTIGKRLLDAKRLGHPLTIVV 398 Query: 407 GSKFVSDSKVEIKHRLTG-IREDMSLEEVINYASHRFSNN 445 G+K +++ +G + ++S EV+ + + Sbjct: 399 GAKAAQQEAPQLELHASGAEKMELSAAEVLRVVATHVQHK 438 >gi|319745866|gb|EFV98156.1| proline--tRNA ligase [Streptococcus agalactiae ATCC 13813] Length = 617 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 95/212 (44%), Positives = 135/212 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDQSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHKDYEDLDVTYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 Y IF R GL + + G +GG S EF+ Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMA 212 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ K ARGIE+GHIF GT+YS M A +G+ + + Sbjct: 414 FTAEYVDIREVKEGEISPDGKGTLKFARGIEIGHIFKLGTRYSDSMGANILDENGRSNPI 473 Query: 313 QMGSYGIGAMRVVAAVIESSHD-------------GKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P+ +APF + LI + DQ Sbjct: 474 VMGCYGIGVSRILSAVIEQHARLFVNKTPKGAYRFAWGINFPEELAPFDVHLITVNVKDQ 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +D EKI A L G +V DD E++GS+F+ +DL+G P++V VG K S+ VE+K Sbjct: 534 ESQDLTEKIEADLMLKGYEVLTDDRNERVGSKFSDSDLIGLPIRVTVGKK-ASEGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + +G ++ + +I + Sbjct: 593 IKASGDTIEVHADNLIETL--EILTKK 617 >gi|302855151|ref|XP_002959075.1| hypothetical protein VOLCADRAFT_70347 [Volvox carteri f. nagariensis] gi|300255572|gb|EFJ39869.1| hypothetical protein VOLCADRAFT_70347 [Volvox carteri f. nagariensis] Length = 563 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 58/422 (13%), Positives = 118/422 (27%), Gaps = 58/422 (13%) Query: 11 LQENPRDAEIASHKLMLRTGMIHQ-HSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEM 69 + RD +L L + I + G+ W P G + +E G + Sbjct: 183 EEAAKRDHRKLGTELNLFS--IQENSGGGLVYWHPKGALVRHLIETFWKELHLSRGYQLV 240 Query: 70 SVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLP 129 P + ADLW SG + Y + M D++ P + +++ SYR+LP Sbjct: 241 YSPHIAKADLWRTSGHLEFYKENMYEQMKVEDESYQLRPMNCPFHISVYKDGYYSYRDLP 300 Query: 130 FTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRL 188 ++ +R E G+ R R F DA+ F L + + + Sbjct: 301 LRLAELGTVYRYERSGTMHGLFRVRGFTQDDAHIFCLPNQITSE-IKGVLDLVEETLGTF 359 Query: 189 GLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSI 248 G + + P + + Sbjct: 360 GFHEYEINLSTRPEKS-----------------VGDDVIWSTAEAALVEALGAKGWNYQV 402 Query: 249 VEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGK 308 A Y D+ K+ D++ + S ++ F + ++ T Sbjct: 403 DAGGGAFYGPKIDI---KIRDAIGRKWQCSTIQLD----FNLPERLVFAVAIT-LTPFSA 454 Query: 309 DHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKI 368 + + + +R V + + + + Sbjct: 455 ETPAFLNCCVLPFVRQVRLLTV---------------------------NDTVAEYARDV 487 Query: 369 YARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIRED 428 A++ + G V +G A+ P+ +VG K + + ++ Sbjct: 488 AAQMKRAGIRVEV-VGEASMGKLIRNAEKAKIPVICVVGVKEADGNSLSVRLYGGKELGA 546 Query: 429 MS 430 + Sbjct: 547 LP 548 >gi|25011939|ref|NP_736334.1| prolyl-tRNA synthetase [Streptococcus agalactiae NEM316] gi|81845546|sp|Q8E362|SYP_STRA3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|24413481|emb|CAD47559.1| prolyl-tRNA synthetase [Streptococcus agalactiae NEM316] Length = 617 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 95/212 (44%), Positives = 135/212 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDQSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHKDYEDLDVTYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 Y IF R GL + + G +GG S EF+ Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMA 212 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ K ARGIE+GHIF GT+YS M A +G+ + + Sbjct: 414 FTAEYVDIREVKEGEISPDGKGTLKFARGIEIGHIFKLGTRYSDSMGANILDENGRSNPI 473 Query: 313 QMGSYGIGAMRVVAAVIESSHD-------------GKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P+ +APF + LI + DQ Sbjct: 474 VMGCYGIGVSRILSAVIEQHARLFVNKTPKGAYRFAWGINFPEELAPFDVHLITVNVKDQ 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +D EKI A L G +V DD E++GS+F+ +DL+G P++V VG K S+ VE+K Sbjct: 534 ESQDLTEKIEADLMLKGYEVLTDDRNERVGSKFSDSDLIGLPIRVTVGKK-ASEGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + +G ++ + +I + Sbjct: 593 IKASGDTIEVHADNLIETL--EILTKK 617 >gi|77405643|ref|ZP_00782731.1| prolyl-tRNA synthetase [Streptococcus agalactiae H36B] gi|161486742|ref|YP_330466.2| prolyl-tRNA synthetase [Streptococcus agalactiae A909] gi|114152259|sp|Q3JZ37|SYP_STRA1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|77175716|gb|EAO78497.1| prolyl-tRNA synthetase [Streptococcus agalactiae H36B] Length = 617 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 95/212 (44%), Positives = 135/212 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDQSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHKDYEDLDVTYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 Y IF R GL + + G +GG S EF+ Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMA 212 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ K +RGIE+GHIF GT+YS M A +G+ + + Sbjct: 414 FTAEYVDIREVKEGEISPDGKGTLKFSRGIEIGHIFKLGTRYSDSMGANILDENGRSNPI 473 Query: 313 QMGSYGIGAMRVVAAVIESSHD-------------GKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P+ +APF + LI + DQ Sbjct: 474 VMGCYGIGVSRILSAVIEQHARLFVNKTPKGAYRFAWGINFPEELAPFDVHLITVNVKDQ 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +D EKI A L G +V DD E++GS+F+ +DL+G P++V VG K S+ VE+K Sbjct: 534 ESQDLTEKIEADLMLKGYEVLTDDRNERVGSKFSDSDLIGLPIRVTVGKK-ASEGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + +G ++ + +I + Sbjct: 593 IKASGDTIEVHADNLIETL--EILTKK 617 >gi|22538051|ref|NP_688902.1| prolyl-tRNA synthetase [Streptococcus agalactiae 2603V/R] gi|76798737|ref|ZP_00780956.1| prolyl-tRNA synthetase [Streptococcus agalactiae 18RS21] gi|77414704|ref|ZP_00790836.1| prolyl-tRNA synthetase [Streptococcus agalactiae 515] gi|81845373|sp|Q8DXD8|SYP_STRA5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|22534955|gb|AAN00775.1|AE014278_2 prolyl-tRNA synthetase [Streptococcus agalactiae 2603V/R] gi|76585916|gb|EAO62455.1| prolyl-tRNA synthetase [Streptococcus agalactiae 18RS21] gi|77159248|gb|EAO70427.1| prolyl-tRNA synthetase [Streptococcus agalactiae 515] Length = 617 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 95/212 (44%), Positives = 135/212 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDQSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHKDYEDLDVTYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 Y IF R GL + + G +GG S EF+ Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMA 212 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ K ARGIE+GHIF GT+YS M A +G+ + + Sbjct: 414 FTAEYVDIREVKEGEISPDGKGTLKFARGIEIGHIFKLGTRYSDSMGANILDENGRSNPI 473 Query: 313 QMGSYGIGAMRVVAAVIESSHD-------------GKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P+ +APF + LI + DQ Sbjct: 474 VMGCYGIGVSRILSAVIEQHARLFVNKTPKGAYRFAWGINFPEELAPFDVHLITVNVKDQ 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +D EKI A L G +V DD E++GS+F+ +DL+G P++V VG K S+ VE+K Sbjct: 534 ESQDLTEKIEADLMLKGYEVLTDDRNERVGSKFSDSDLIGLPIRVTVGKK-ASEGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + +G ++ + +I + Sbjct: 593 IKASGDTIEVHADNLIETL--EILTKK 617 >gi|77412297|ref|ZP_00788612.1| prolyl-tRNA synthetase [Streptococcus agalactiae CJB111] gi|77161644|gb|EAO72640.1| prolyl-tRNA synthetase [Streptococcus agalactiae CJB111] Length = 617 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 95/212 (44%), Positives = 135/212 (63%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK +P L+E P DA++ SH LM+R G + Q S GIY++LPL + ++ I+R+E Sbjct: 1 MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMRQE 60 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 61 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDQSDFILGPTHEETFTTLVRD 120 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKD YSF E +Y + Sbjct: 121 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHKDYEDLDVTYEDYRKA 180 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIV 212 Y IF R GL + + G +GG S EF+ Sbjct: 181 YEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMA 212 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 18/207 (8%) Query: 255 PYAATSDVHNEKLFDSLPENK--RVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ K ARGIE+GHIF GT+YS M A +G+ + + Sbjct: 414 FTAEYVDIREVKEGEISPDGKGTLKFARGIEIGHIFKLGTRYSDSMGANILDENGRSNPI 473 Query: 313 QMGSYGIGAMRVVAAVIESSHD-------------GKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P+ +APF + LI + DQ Sbjct: 474 VMGCYGIGVSRILSAVIEQHARLFVNKTPKGAYRFAWGINFPEELAPFDVHLITVNVKDQ 533 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 +D EKI A L G +V DD E++GS+F+ +DL+G P++V VG K S+ VE+K Sbjct: 534 ESQDLTEKIEADLMLKGYEVLTDDRNERVGSKFSDSDLIGLPIRVTVGKK-ASEGIVEVK 592 Query: 420 HRLTGIREDMSLEEVINYASHRFSNNR 446 + +G ++ + +I + Sbjct: 593 IKASGDTIEVHADNLIETL--EILTKK 617 >gi|13542113|ref|NP_111801.1| threonyl-tRNA synthetase [Thermoplasma volcanium GSS1] gi|22654129|sp|Q978W0|SYT_THEVO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|14325544|dbj|BAB60447.1| tRNA synthetase Thr [Thermoplasma volcanium GSS1] Length = 660 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 77/463 (16%), Positives = 144/463 (31%), Gaps = 43/463 (9%) Query: 5 KYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRT 64 +Y + + RD ++ L + + G + P GQ + + + Sbjct: 213 RYLENLEEAKKRDHRKIIAEMDL-AVFNSEWAPGFPMYTPNGQIIRKELIKYMDYVNGKN 271 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G ++ P + +W +SG Y Y M + + P + IF S Sbjct: 272 GWTDVWTPHVFKDTIWKQSGHYAKYKPNMYLFVLPDGDSYGIKPMNCPGHIAIFARRKYS 331 Query: 125 YRNLPFTFYQIQLKFRDELRPRF-GVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + + +R E G+ R R F D + F + + + Sbjct: 332 YRDLPVKYSEPGTVYRYEKSGEVGGLTRPRAFTQDDGHEFIRMDQIVGEIKTLLGMVRET 391 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFI---VLADTGET----------QVFCSKDF--- 227 G +I M + I + ++ V D G C Sbjct: 392 FTTVFG--NIEMAFDLSVIDKEHPENYLLSYVCKDCGNRVEGLRGTDIECPVCHSHNMDP 449 Query: 228 ----MDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIE 283 D D + A Y DVH + D+L ++S ++ Sbjct: 450 DFSTWDNATEQLRQAMDSMGITYKEYPGEAAFYGPKIDVH---VKDALGRMWQLSTIQVD 506 Query: 284 VGHIFYFGTKYSLPMSATFKGADGKDHY-VQMGSYGIGAMRVVAAVIESSHDGKGIIWPD 342 FG T+ ++GK+ V + G+ A++ GK W Sbjct: 507 FFMPINFG--------LTYTNSEGKEERVVIIHRAIYGSYERFMAILLEHFAGKLPTWLT 558 Query: 343 SVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPL 402 + + I + A + K+ L G DD + + + + Sbjct: 559 PIQTYVIPVGTANA------EYARKVNKSLLDAGIRSVVDDGPDTVSKKIKMIHDQRPSY 612 Query: 403 QVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNN 445 V+VG+K D+ V +++R G + + E + + Sbjct: 613 IVVVGAKEEQDNTVTVRNRA-GKSKTYGMNEFLEIIKNEIEKR 654 >gi|213389878|gb|ACJ46005.1| threonyl tRNA synthetase [Palm lethal yellowing phytoplasma] Length = 641 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 64/445 (14%), Positives = 150/445 (33%), Gaps = 33/445 (7%) Query: 5 KYFLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNR 63 K +L +L+E +D + + + + G WLP G + I ++ Sbjct: 227 KNYLKLLEERKQKDHKNINKEQEFFM-LTPDVGLGFPLWLPKGATIRRIIERYIVNKELE 285 Query: 64 TGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKA-MIYGPTHEEVMTDIFRSHI 122 + P L + +L+ SG Y + M + + ++ P + IF+ + Sbjct: 286 YDYQHVYTPVLANIELYQTSGHLKLYKENMFPIMKLQNDEKIVLRPMNCPHHMMIFKKKL 345 Query: 123 KSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYL 182 +SY++LPF ++ + R E ++ + + +T ++ K+ Sbjct: 346 RSYKDLPFKIAELGMMHRYEHSGAVSGLQRTRAMTLNDAHIFITENQIENEIIKIINFIF 405 Query: 183 RIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDI 242 ++ + + + + F ++ ++ Sbjct: 406 EVYKDFNITEYYFNLSTRDVNNKK-------------KYFENELIWQRSEFILKNILTEL 452 Query: 243 ISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATF 302 A Y D+ ++ +L + +S ++ F + T+ Sbjct: 453 KIPFKESVGDAAFYGPKIDI---QVLTALNNEETLSTVQLD----FLLP----KKFNLTY 501 Query: 303 KGADGKDHYVQ-MGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G+D K+H + I + A + + G +W V I + NIK Sbjct: 502 VGSDNKEHNPILIHRAIISTLERFVAFLIEKNKGFFPLWLAPVQVVLIPINNIK-----Y 556 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 +KI K +D + + + P Q+++G K + +S + + Sbjct: 557 LKYTQKINKIFKKNNFRSEINDKDNSLSYKIRESQKNKIPYQIVIGEKELLNSTLTFREY 616 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 + + + +S+EE I+ + + + Sbjct: 617 RSNLSQTVSIEEFIDIFNKKIKEKK 641 >gi|228476457|ref|ZP_04061147.1| prolyl-tRNA synthetase [Streptococcus salivarius SK126] gi|228251878|gb|EEK10924.1| prolyl-tRNA synthetase [Streptococcus salivarius SK126] Length = 621 Score = 191 bits (484), Expect = 3e-46, Method: Composition-based stats. Identities = 101/242 (41%), Positives = 147/242 (60%), Gaps = 2/242 (0%) Query: 1 MRRSKYFLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREE 60 M++SK + L+E P DA++ SH LM+R G + Q S GIY+++PL +A++ I+REE Sbjct: 2 MKQSKMLISTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYMPLANRAIEKFKTIMREE 61 Query: 61 QNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRS 120 + GA+EM P L +ADLW ESGRY++YG+++ +L +R+ I GPTHEE T + R Sbjct: 62 FEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDKSDFILGPTHEETFTALVRD 121 Query: 121 HIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVS 180 +KSY+ LP YQIQ K+RDE RPR G++R+REF+MKDAYSF E +Y + Sbjct: 122 AVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDAYSFHQNYEDLDVTYEDYRKA 181 Query: 181 YLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFD 240 Y IF R GL+ + + G +GG S EF+ + E +D I S + + Sbjct: 182 YEAIFTRAGLEFKGIIGDGGAMGGKDSQEFMAVTP--ERTNLNRWVVLDKSIASLDEIPE 239 Query: 241 DI 242 D+ Sbjct: 240 DV 241 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 103/200 (51%), Gaps = 16/200 (8%) Query: 255 PYAATSDVHNEKLFDSLPENKRVSA--RGIEVGHIFYFGTKYSLPMSATFKGADGKDHYV 312 A D+ K + P+ + V RGIE+GHIF GT+YS M A +G+ + Sbjct: 415 FKAEYVDIREVKEGEISPDGQGVLQFARGIEIGHIFKLGTRYSESMGANVLDENGRAVPI 474 Query: 313 QMGSYGIGAMRVVAAVIESS-------------HDGKGIIWPDSVAPFKISLINIKAHDQ 359 MG YGIG R+++AVIE GI +P +AP+ + LI + D+ Sbjct: 475 IMGCYGIGVSRILSAVIEQHARLFVNKTPKGQYRYAWGINFPKELAPYDVHLITVNTKDE 534 Query: 360 VCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIK 419 E++ A L G DV DD E++GS+F+ +DL+G P++V VG K S+ VE+K Sbjct: 535 EANALTERLEAALMAEGYDVLTDDRNERVGSKFSDSDLIGLPIRVTVGKK-ASEGVVEVK 593 Query: 420 HRLTGIREDMSLEEVINYAS 439 + TG +++ + +I + Sbjct: 594 IKATGDTIEVNADNLIETLA 613 >gi|320583490|gb|EFW97703.1| Mitochondrial threonyl-tRNA synthetase [Pichia angusta DL-1] Length = 427 Score = 191 bits (484), Expect = 3e-46, Method: Composition-based stats. Identities = 72/434 (16%), Positives = 148/434 (34%), Gaps = 51/434 (11%) Query: 31 MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYG 90 MI S G +LP G + + + ++ +Q + G E+ P + DLW SG +D+Y Sbjct: 27 MIDASSPGSVFFLPHGTRIFNRLVQFMKIQQEKHGFTEVISPLMYKKDLWETSGHWDNYA 86 Query: 91 KEMLRLA-----DRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 ++M R+ ++ + P + IF +S+ LP R+E Sbjct: 87 EDMFRVESNSSSNKLEAVYGLKPMNCPGHCVIFGRFARSHHELPIRLSDWSSLHRNEPSG 146 Query: 146 R-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGG 204 G+ R R F D + F + K + G + M + P Sbjct: 147 ALTGLTRVRRFHQDDGHIFCSKSQVGAE-IGKTLQLIRLCYSVFGFQKYRMMLSTRPETH 205 Query: 205 DLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVEQWTAPYAATSDVHN 264 + E A+ + + +I ++ A Y DV Sbjct: 206 IGTVEEWEEAENELQKALDRHAGPEN---------------WAIRDKDGAFYGPKIDVL- 249 Query: 265 EKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRV 324 + D + + + ++ F ++ ++G G + + + G++ Sbjct: 250 --VTDRTGKEHQAATVQLD----FQLPQRF----QLEYQGEHGPETPIMVHRAVFGSVER 299 Query: 325 VAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYAR------------L 372 A++ D WP ++P + +I + + + I + L Sbjct: 300 FMALL---MDEYEGKWPFWLSPRQAVIIPVN---ETHLEYSRGIQEKLGGQQDLDVACSL 353 Query: 373 SKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLE 432 V V D E +G + A G+ ++VG + V K+ ++ R + M ++ Sbjct: 354 RDVNYYVDVDSRAETVGLRTKDAIQKGYNYIILVGDREVQSGKIAVRSRDNRKVQTMDID 413 Query: 433 EVINYASHRFSNNR 446 E+ + + + Sbjct: 414 ELQTLFADLEKSYK 427 >gi|156098721|ref|XP_001615376.1| threonyl-tRNA synthetase [Plasmodium vivax SaI-1] gi|148804250|gb|EDL45649.1| threonyl-tRNA synthetase, putative [Plasmodium vivax] Length = 912 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 91/482 (18%), Positives = 148/482 (30%), Gaps = 51/482 (10%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 +L L+E RD KL S G WLP G K + + +R E Sbjct: 427 YLNFLEEAKKRDHRNVGKKLHFF-FFDKDTSPGSCFWLPHGAKIYNKLIDFVRREYRIRL 485 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P + S DLW SG Y +Y M + + K P + +F+ SY Sbjct: 486 YDEVITPNVFSCDLWRTSGHYQNYKDCMF-IFNVEQKEWGMKPMNCPGHCVMFKQLNASY 544 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R+LP + R+E+ G+ R R F D++ F T E K I Sbjct: 545 RSLPIRLADFGVLHRNEISGSLSGLTRVRRFQQDDSHIFC-TFEQIKEEVLGTLHFIFFI 603 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVF---------------------- 222 + G K + P + A+ Sbjct: 604 YDLFGFKYELF-LSTRPKKFIGNISTWDFAEQALKDALNSANIPWKLNEGDGAFYGPKID 662 Query: 223 ------------CSKDFMDFPIP---SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKL 267 C +DF +P + D +L + A +V E Sbjct: 663 ILLKDSINRTHQCGTIQLDFQLPCRFNLQYKNRDFGALAEGGDGEGAAAKREEEVGAEVA 722 Query: 268 FDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAA 327 + A G + A G D V + +G++ A Sbjct: 723 AGAEVAAGAAGAADATDAANGANGANTADAAPAAELLKRGFDRPVIIHRAILGSVERFVA 782 Query: 328 VIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQ 387 ++ GK W + D ++ L+ DV D Sbjct: 783 ILIEHTAGKLPFW------ISPRQAIVLPVSDKFNDYAHYVHQTLNNHLFDVEIDTSLNT 836 Query: 388 IGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDM-SLEEVINYASHRFS-NN 445 + + A L F ++VG K ++ + V +++R ++ SLEE+I N+ Sbjct: 837 LNKKIREAQLNQFNFILVVGEKELTTNTVTVRNRDDQNNHEVCSLEELIARFGKLLEVNS 896 Query: 446 RP 447 +P Sbjct: 897 KP 898 >gi|330723715|gb|AEC46085.1| threonyl-tRNA synthetase [Mycoplasma hyorhinis MCLD] Length = 581 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 141/442 (31%), Gaps = 34/442 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 FL ILQE RD +L L T +G WL G K ++ + I + G Sbjct: 170 FLHILQERKERDHRKLGKELKLFT-FNKLFGQGFPIWLEDGMKIVNKIKEKILFYDKKYG 228 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L+ SG + Y ++M + +I P +F + KSY Sbjct: 229 FKEVFTPHFGEQKLYEISGHFAHYKEDMFGALVVEGENLIPRPMTCPHHIILFDTFKKSY 288 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP+ + +R E G+ R R L+ + + F + + ++ + Sbjct: 289 RELPYRISEQSRLYRYEKSGALTGLERVRSMLLTEGHIFVAKTQIVDE-FKHLYQMISEV 347 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 ++ + F + + F + ++ Sbjct: 348 LKFFKIEVNYVS-------------FSKRDPENKEKFFDDDQMWNQAESDLEKVLKELGV 394 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y D + + L +S ++ F +F Sbjct: 395 EYQEKIGEAAFYGPKIDFQIKTV---LNHEITISTLQLD----FLLP----KKFDISFIN 443 Query: 305 ADGKDHYVQMGSYG-IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + G IG +++ G W + I + D Sbjct: 444 QDNAKETPILIHRGLIGTYERFVSILLEQTKGILPFWLS-----PKQFVVIPIENSKHSD 498 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +I +L ++ +V DD E+I + A + Q+IVG + V + + + Sbjct: 499 FALEIAKKLEELNFNVTVDDRNERINKKIREAQMQKTKFQIIVGDQEVENKNITYREYGQ 558 Query: 424 GIREDMSLEEVINYASHRFSNN 445 ++ E++I + + NN Sbjct: 559 QNSNTLNFEDLIKFIKAKIENN 580 >gi|72080917|ref|YP_287975.1| threonyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448] gi|71914041|gb|AAZ53952.1| threonyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448] Length = 579 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 77/437 (17%), Positives = 142/437 (32%), Gaps = 35/437 (8%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 FL ILQE RD KL L T G WL G + + + I E G Sbjct: 170 FLGILQERQERDHRKIGAKLKLFT-FSSYFGLGFPVWLENGMRIYNKIRQKILEFDRNYG 228 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P +L+ SG Y +M + ++ +I P +F + SY Sbjct: 229 FREVLTPHFGHKELYKISGHLLHYRDDMFKGLKIENEELIPRPMTCPHHIILFSQQLFSY 288 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 RNLP+ + +R E G+ R R + + + F + + +F + Sbjct: 289 RNLPYRISEQSRLYRYEKSGALLGLERVRAMDLTEGHIFVSKSQIFSE-ISHLFQMISEV 347 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 ++ + F + + F + D Sbjct: 348 LDFFKVQIFYIS-------------FSKRDPKNKDKFFQDDQMWEQAEADLKQFLDQNKI 394 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y D ++ +L + +S ++ F K+ +F Sbjct: 395 NYIEKIGEAAFYGPKIDF---QVKTALNKELTISTLQLD----FLLPEKF----KISFIN 443 Query: 305 ADGKDHYVQMGSYG-IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 K + G IG A++ G W I + + D Sbjct: 444 EHNKKETPILIHRGLIGTYERFIALLLEQSKGNLPFW------ISPKQIIVIPVAEKHND 497 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +KI+ L +G + D E+I + A+L QVI+G + ++ +++ + + Sbjct: 498 FAQKIHKILFDLGFNSEIDLRSERISRKIREANLEKINFQVIIGDEEIAKNEITYRKFGS 557 Query: 424 GIREDMSLEEVINYASH 440 +SL + ++ + Sbjct: 558 PELFRISLVDFVDLLKN 574 >gi|284166054|ref|YP_003404333.1| threonyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511] gi|284015709|gb|ADB61660.1| threonyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511] Length = 649 Score = 190 bits (483), Expect = 4e-46, Method: Composition-based stats. Identities = 68/445 (15%), Positives = 127/445 (28%), Gaps = 46/445 (10%) Query: 6 YFLPILQENPRDAEIASHKLMLRTGMIHQH-SKGIYSWLPLGQKALDNVNAIIREEQNRT 64 + + RD +++ L + I G+ + P G+ L + + + Sbjct: 239 FLERKQEAEKRDHRRIGNEMNLFS--IQDVTGPGLPLYHPPGKTVLKELEDFVEDLNKDA 296 Query: 65 GAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKS 124 G + P + DLW SG Y++Y +M + D D P + IF+ S Sbjct: 297 GYDYVETPHVFKTDLWHRSGHYENYQDDMF-IFDVGDDEFGLKPMNCPGHAAIFQDQSWS 355 Query: 125 YRNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLR 183 YR+LP + + +R E R G+ R F + D + F + + ++ Sbjct: 356 YRDLPIRYAENGKVYRKEQRGELSGLSRVWAFTIDDGHLFIRPDQIRQE-VEEIMDMITD 414 Query: 184 IFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDII 243 + L+ A T + S + D ++ Sbjct: 415 VLETFDLEYEMALA------------------TRPEKSVGSDEIWDRAEEQLENVLENRA 456 Query: 244 SLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFK 303 + E A Y D E D++ + G + Sbjct: 457 HDYEVEEGDGAFYGPKIDFAFE---DAIGRSW--------DGPTVQLDFNMPERFDLNYV 505 Query: 304 GADGKDHYVQMGSYGI--GAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVC 361 G D ++H M + R +IE + Sbjct: 506 GEDNEEHRPVMIHRALYGSYERFFMMLIEHYEGRFPLWLAPEQVRVLPI-------SDDN 558 Query: 362 RDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHR 421 ++ V D + + A P Q+IVG D + ++ R Sbjct: 559 LGYAHRVANEFDD--FRVEVDGRDSTLERKIRAAHDDRVPYQIIVGDNEEDDGNISVRDR 616 Query: 422 LTGIREDMSLEEVINYASHRFSNNR 446 D+ +E+ + R Sbjct: 617 FEDQEYDVEIEDFKQHLEAEIEEQR 641 >gi|304373385|ref|YP_003856594.1| Threonyl-tRNA synthetase [Mycoplasma hyorhinis HUB-1] gi|304309576|gb|ADM22056.1| Threonyl-tRNA synthetase [Mycoplasma hyorhinis HUB-1] Length = 581 Score = 190 bits (483), Expect = 4e-46, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 141/442 (31%), Gaps = 34/442 (7%) Query: 7 FLPILQENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTG 65 FL ILQE RD +L L T +G WL G K ++ + I + G Sbjct: 170 FLHILQERKERDHRKLGKELKLFT-FNKLFGQGFPIWLEDGMKIVNKIKEKILFYDKKYG 228 Query: 66 AIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSY 125 E+ P L+ SG + Y ++M + +I P +F + KSY Sbjct: 229 FKEVFTPHFGEQKLYEISGHFTHYKEDMFGALVVEGENLIPRPMTCPHHIILFDTFKKSY 288 Query: 126 RNLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRI 184 R LP+ + +R E G+ R R L+ + + F + + ++ + Sbjct: 289 RELPYRISEQSRLYRYEKSGALTGLERVRSMLLTEGHIFVAKTQIVDE-FKHLYQMISEV 347 Query: 185 FHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIIS 244 ++ + F + + F + ++ Sbjct: 348 LKFFKIEVNYVS-------------FSKRDPENKEKFFDDDQMWNQAESDLEKVLKELGV 394 Query: 245 LNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKG 304 A Y D + + L +S ++ F +F Sbjct: 395 EYQEKIGEAAFYGPKIDFQIKTV---LNHEITISTLQLD----FLLP----KKFDISFIN 443 Query: 305 ADGKDHYVQMGSYG-IGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRD 363 D + G IG +++ G W + I + D Sbjct: 444 QDNAKETPILIHRGLIGTYERFVSILLEQTKGILPFWLS-----PKQFVVIPIENSKHSD 498 Query: 364 ACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLT 423 +I +L ++ +V DD E+I + A + Q+IVG + V + + + Sbjct: 499 FALEIAKKLEELNFNVTVDDRNERINKKIREAQMQKTKFQIIVGDQEVENKNITYREYGQ 558 Query: 424 GIREDMSLEEVINYASHRFSNN 445 ++ E++I + + NN Sbjct: 559 QNSNTLNFEDLIKFIKAKIENN 580 >gi|195492914|ref|XP_002094195.1| GE21696 [Drosophila yakuba] gi|194180296|gb|EDW93907.1| GE21696 [Drosophila yakuba] Length = 458 Score = 190 bits (483), Expect = 4e-46, Method: Composition-based stats. Identities = 134/457 (29%), Positives = 213/457 (46%), Gaps = 48/457 (10%) Query: 2 RRSKYFLPILQENPRDAEI-------ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVN 54 + S+ F P L P++A + S KL+ G++ S G Y +P+ Q+++D Sbjct: 3 KASRIFCPALI-TPKNAVVKQTEQLSRSQKLLTELGLVKSGSNGTYQIMPMAQRSVDKFI 61 Query: 55 AIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM 114 +++ G ++++P L LW ++GR + E + DR+ K + PTHEE + Sbjct: 62 DLVQSNMLLAGGQKITLPILTPTALWRKTGRLEGDISEFYMVRDRSGKQFLMSPTHEEAV 121 Query: 115 T-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 T + + SYR LP +QI KFRDEL+ RFG+MR++EFLMKD YSFD+ E ++ + Sbjct: 122 TAMLASTSPISYRQLPLRLFQIGPKFRDELKTRFGLMRAKEFLMKDMYSFDVCEETARET 181 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y+ + +Y R+F +L + + + A++G +GG +SHE+ ++ GE + Sbjct: 182 YSVVNAAYDRLFKQLEVPFVKVNADTGMMGGSVSHEYHYVSAVGEDNLLQCSSC------ 235 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 T V S RG+EV H F G K Sbjct: 236 --------------------GFAGNTEVVKTPASCPSCNSTDLKEVRGVEVAHTFLLGDK 275 Query: 294 YSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 YS P+ ATF GK + MG YGIG RV+AA +E + WP +AP+ + LI Sbjct: 276 YSKPLGATFLNTKGKPQSLVMGCYGIGITRVIAAALEVLSSDHELHWPKLLAPYDVCLIG 335 Query: 354 IKAHDQVCRDACEKIYARLSKVGC-------DVFWDDMGE-QIGSQFAVADLLGFPLQVI 405 K + + E I L + ++ DD E IG + A LG PL ++ Sbjct: 336 PKQGSKEQSE-AEMIENELV-LNVGEICGHQELLHDDRKELTIGKRLLEAKRLGHPLIIV 393 Query: 406 VGSKFV--SDSKVEIKHRLTGIREDMSLEEVINYASH 440 VG+K + K+E+ G ++ L E + + Sbjct: 394 VGAKAIRQDSPKLEVHT-SKGETLELDLSETLKLVAE 429 >gi|24656200|ref|NP_647737.1| Prolyl-tRNA synthetase [Drosophila melanogaster] gi|7292265|gb|AAF47674.1| Prolyl-tRNA synthetase [Drosophila melanogaster] Length = 458 Score = 190 bits (482), Expect = 5e-46, Method: Composition-based stats. Identities = 133/463 (28%), Positives = 214/463 (46%), Gaps = 48/463 (10%) Query: 2 RRSKYFLPILQENPRDAEI-------ASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVN 54 + S+ F P L P++A + S KL+ G++ S G Y +P+ Q+++D Sbjct: 3 KASRIFCPALI-TPKNAVVKQTEQLSRSQKLLTELGLVKSGSNGTYQIMPMAQRSVDKCI 61 Query: 55 AIIREEQNRTGAIEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVM 114 +++ + G ++++P L LW ++GR D E + DR+ K + PTHEE + Sbjct: 62 DLVQSNMQQAGGQKITLPILTPTGLWKKTGRLDGDISEFYMVRDRSGKQFLMSPTHEEAV 121 Query: 115 T-DIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSKHS 173 T + + SYR LP +QI KFRDEL+ RFG+MR++EFLMKD YSFD++ E + + Sbjct: 122 TAMLATTSPISYRQLPLRLFQIGPKFRDELKTRFGLMRAKEFLMKDMYSFDVSEETAMET 181 Query: 174 YNKMFVSYLRIFHRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIP 233 Y + +Y R+F +L + + + A +G +GG +SHE+ ++ GE + Sbjct: 182 YTLVNAAYDRLFKQLEVPFVKVNAATGIMGGSVSHEYHYVSPVGEDNLLQCSSC------ 235 Query: 234 SENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTK 293 + V S + RG+EV H F G K Sbjct: 236 --------------------GFAGNSEVVKAPASCPSCNSSDLKEVRGVEVAHTFLLGDK 275 Query: 294 YSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLIN 353 YS P+ ATF GK + MG YGIG RV+AA +E + WP +AP+ + LI Sbjct: 276 YSKPLGATFLNTTGKPQSLVMGCYGIGITRVIAAALEVLSSDHELRWPKLLAPYDVCLIG 335 Query: 354 IKAHDQVCRDACEKIYARLSKVGC-------DVFWDDMGE-QIGSQFAVADLLGFPLQVI 405 K + + E I L + ++ DD E IG + A LG PL ++ Sbjct: 336 PKQGSKEQPE-AEVIENELL-LNVGEICGHQELLHDDRKELTIGKRLLEAKRLGHPLTIV 393 Query: 406 VGSKF--VSDSKVEIKHRLTGIREDMSLEEVINYASHRFSNNR 446 VG+K + K+E+ G ++ E + + + + Sbjct: 394 VGAKSARLDSPKLEVHT-SKGETYELDFSETLKLVAEHSQHKK 435 >gi|70952361|ref|XP_745354.1| threonine--tRNA ligase [Plasmodium chabaudi chabaudi] gi|56525650|emb|CAH82048.1| threonine--tRNA ligase, putative [Plasmodium chabaudi chabaudi] Length = 505 Score = 190 bits (482), Expect = 5e-46, Method: Composition-based stats. Identities = 75/486 (15%), Positives = 141/486 (29%), Gaps = 79/486 (16%) Query: 7 FLPILQENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGA 66 ++ + E RD L L + G W G + + +R+E Sbjct: 35 YIKFIGEGKRDHRNVGKNLNLF-FFEKETLPGSGFWFTHGANIYNKLIEFMRKEYRIRKY 93 Query: 67 IEMSVPTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYR 126 E+ P + S DLW SG Y +Y M + + +K P + IF+ SY+ Sbjct: 94 EEVITPNIFSCDLWKTSGHYQNYKNCMF-IFNIENKEWGMKPMNCPGHCLIFKQLNASYK 152 Query: 127 NLPFTFYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIF 185 +LP + R+E+ G+ R R F DA+ F + ++ Sbjct: 153 SLPIRLADFGVLHRNEITGSLSGLTRVRRFQQDDAHIFCSLDHIKTE-VINVLQFIFYVY 211 Query: 186 HRLGLKSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISL 245 + G K + + P + + +F S + Sbjct: 212 NLFGFKY-DLYLSTRP-----------------PKYIGDINTWNFAEQSLKEALELANVK 253 Query: 246 NSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHI--FYFGTKYSLPMSATFK 303 + E A Y D+ L DSL + ++ F K Sbjct: 254 WKLNEGDGAFYGPKIDI---VLRDSLNRTHQCGTVQLDFQLPIRFNLQYKNKEYGVGQET 310 Query: 304 G----------------------------------------------ADGKDHYVQMGSY 317 G D + + Sbjct: 311 DSNLVNQSNKDANEKKEDSTMGNAGNNDEQNKLDGENAGNNQPGGELKKGFDRPIIIHRA 370 Query: 318 GIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVGC 377 +G++ A++ GK W + + + + I+ L+ Sbjct: 371 ILGSVERFVAILVEHTSGKFPFWLSPRQAIVLPI------SDKFNEYAKYIHDVLTNNLF 424 Query: 378 DVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437 DV D + + A L + ++VG K +S + V ++ R + +++E++N Sbjct: 425 DVDVDISVNTLNKKIREAQLKQYNFILVVGEKELSTNTVTVRDRDNPNDQKYTIQELVNN 484 Query: 438 ASHRFS 443 Sbjct: 485 FKKMLD 490 >gi|330802268|ref|XP_003289141.1| hypothetical protein DICPUDRAFT_35169 [Dictyostelium purpureum] gi|325080808|gb|EGC34348.1| hypothetical protein DICPUDRAFT_35169 [Dictyostelium purpureum] Length = 679 Score = 189 bits (481), Expect = 6e-46, Method: Composition-based stats. Identities = 68/450 (15%), Positives = 143/450 (31%), Gaps = 54/450 (12%) Query: 12 QENPRDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSV 71 + + RD + L H S G +LP G K + + +R E R G E+ Sbjct: 269 KASLRDHRLIGKNQELF--FFHPFSPGSCFFLPHGTKIYNKLLNFLRSEYRRRGYQEVIT 326 Query: 72 PTLQSADLWVESGRYDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFT 131 P + S LW +SG + +Y M + + P + +F +SY+ LP Sbjct: 327 PNIYSQKLWEQSGHWQNYKDNMFSF-ECDHTHYSLKPMNCPGHCLMFAHRQRSYKELPMR 385 Query: 132 FYQIQLKFRDELRPR-FGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGL 190 + R+E G+ R R F DA+ F TP+ + + ++ Sbjct: 386 IADFGVLHRNESHGSLTGLTRVRRFQQDDAHIFC-TPDMIREEIAQCLDFMKFVYSVFNF 444 Query: 191 KSIPMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDFPIPSENTDFDDIISLNSIVE 250 + + P E A+ +QV + I Sbjct: 445 TF-HLELSTRPDSFLGDIEVWDKAENALSQVLTEFC----------------GNQWKINP 487 Query: 251 QWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDH 310 + A Y D+H L D+ ++ + + ++ F +Y+ + + Sbjct: 488 KDGAFYGPKIDIH---LKDANGKSHQCATIQLDFQLPIRFNLEYNDGKKEETENQQSAVN 544 Query: 311 YVQMGSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKAHDQVCRDACEKIYA 370 M + I H G + + + + +I + Sbjct: 545 RPVMIHRALFGSVERMMAILMEHTG-----GKWPFWLSPRQCIVVSVSKAFNNHALEIQS 599 Query: 371 RLSKV------------GCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEI 418 +L++ I + A L + +++G + + + Sbjct: 600 KLNQSMVDIDVDVDISDNL----------IAKKVFEATHLQYNYIIVIGQEESDSGILSV 649 Query: 419 KHRLTGIRED--MSLEEVINYASHRFSNNR 446 + R + +E+ +S++++++ N + Sbjct: 650 RERDSKSKENRKLSIDDLLSEFKLNLKNFK 679 >gi|86146905|ref|ZP_01065224.1| prolyl-tRNA synthetase [Vibrio sp. MED222] gi|85835357|gb|EAQ53496.1| prolyl-tRNA synthetase [Vibrio sp. MED222] Length = 546 Score = 189 bits (481), Expect = 6e-46, Method: Composition-based stats. Identities = 99/212 (46%), Positives = 135/212 (63%), Gaps = 1/212 (0%) Query: 26 MLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSADLWVESGR 85 MLR GMI + + G+Y+WLP G + L V I+R+E + GA+E+ +P +Q +LW E+GR Sbjct: 1 MLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVEILMPVVQPFELWEETGR 60 Query: 86 YDSYGKEMLRLADRNDKAMIYGPTHEEVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRP 145 + G E+LR DR+ + + PT EEV+T + R+ I SY+ LP YQIQ KFRDE RP Sbjct: 61 SEKMGPELLRFTDRHSRPFVLSPTAEEVVTSLVRNEISSYKQLPLNLYQIQTKFRDERRP 120 Query: 146 RFGVMRSREFLMKDAYSFDLTPEGSKHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIGGD 205 RFGVMR+REF M DAYSFD+ EG + SY M +Y + F R+GL+ P+ A+SG IGG Sbjct: 121 RFGVMRAREFSMMDAYSFDIDKEGLEKSYQAMHDAYCKAFDRMGLEYRPVLADSGAIGGS 180 Query: 206 LSHEFIVLADTGETQVFCSKDFMDFPIPSENT 237 S EF VLA++GE + D+ E Sbjct: 181 GSQEFHVLAESGEDLIAF-SSESDYAANIEKA 211 Score = 167 bits (424), Expect = 3e-39, Method: Composition-based stats. Identities = 68/190 (35%), Positives = 110/190 (57%), Gaps = 3/190 (1%) Query: 257 AATSDVHNEKLFD--SLPENKRVSARGIEVGHIFYFGTKYSLPMSATFKGADGKDHYVQM 314 A D+ N D + RGIEVGHIF G YS M+ G DGK ++M Sbjct: 357 AQVEDLRNVVEGDLSPCGQGTIQLKRGIEVGHIFQLGNTYSKAMNCNVLGPDGKSVILEM 416 Query: 315 GSYGIGAMRVVAAVIESSHDGKGIIWPDSVAPFKISLINIKA-HDQVCRDACEKIYARLS 373 G YGIG RVVA+ IE +HD GI WPD++APF+++++ + + ++A EK+YA L+ Sbjct: 417 GCYGIGVSRVVASAIEQNHDKFGITWPDALAPFQVAIVPMNMHKSERVKEAAEKLYAELT 476 Query: 374 KVGCDVFWDDMGEQIGSQFAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEE 433 +G +V +DD E+ G F +L+G P +++G + + + E K+R TG +E ++++ Sbjct: 477 AMGIEVLFDDRKERPGVMFKDIELVGIPHTIVIGDRSMDEGNFEYKNRRTGDKEAIAMDT 536 Query: 434 VINYASHRFS 443 VI + + + + Sbjct: 537 VIEHLTAQLA 546 >gi|320165002|gb|EFW41901.1| Tarsl2 protein [Capsaspora owczarzaki ATCC 30864] Length = 777 Score = 189 bits (481), Expect = 6e-46, Method: Composition-based stats. Identities = 78/492 (15%), Positives = 149/492 (30%), Gaps = 95/492 (19%) Query: 12 QENP-RDAEIASHKLMLRTGMIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMS 70 +E RD + L M H +S G LP G K + + IR G E+S Sbjct: 321 EEAKLRDHRLIGAAQQLF--MFHPYSPGSAFMLPHGMKIISRLQEYIRLAYIHYGYQEVS 378 Query: 71 VPTLQSADLWVESGRYDSYGKEMLRLA---------------------------DRNDKA 103 P + S +LW SG Y ++M + +D Sbjct: 379 TPIVYSKELWETSGHLQHYAQDMF