RPSBLAST alignment for GI: 254780870 and conserved domain: cd00861
>gnl|CDD|29801 cd00861, ProRS_anticodon_short, ProRS Prolyl-anticodon binding domain, short version found predominantly in bacteria. ProRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.. Length = 94
Score = 102 bits (255), Expect = 3e-22
Identities = 37/92 (40%), Positives = 60/92 (65%)
Query: 346 PFKISLINIKAHDQVCRDACEKIYARLSKVGCDVFWDDMGEQIGSQFAVADLLGFPLQVI 405
PF + +I + D+V ++ EK+YA L G DV DD E+ G +FA ADL+G P +++
Sbjct: 1 PFDVVIIPMNMKDEVQQELAEKLYAELQAAGVDVLLDDRNERPGVKFADADLIGIPYRIV 60
Query: 406 VGSKFVSDSKVEIKHRLTGIREDMSLEEVINY 437
VG K ++ VEIK R TG +E++S++E++ +
Sbjct: 61 VGKKSAAEGIVEIKVRKTGEKEEISIDELLEF 92