RPSBLAST alignment for GI: 254780871 and conserved domain: cd03219
>gnl|CDD|72978 cd03219, ABC_Mj1267_LivG_branched, The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).. Length = 236
Score = 102 bits (257), Expect = 7e-23
Identities = 59/217 (27%), Positives = 113/217 (52%), Gaps = 19/217 (8%)
Query: 17 RQVGKPF---PVLENVHLSLKKGEIVALVSPSGTGKSTILH-IAGLLEVPDQGNVIIANQ 72
R + K F L++V S++ GEI L+ P+G GK+T+ + I+G L P G+V+ +
Sbjct: 4 RGLTKRFGGLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR-PTSGSVLFDGE 62
Query: 73 LCNKLSDDKKSFLRCSKIGFVYQEHRLLMDFSVIENII----------FPQIIAGINHKT 122
L + + L IG +Q RL + +V+EN++ A +
Sbjct: 63 DITGLPPHEIARL---GIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREERE 119
Query: 123 AYQRAMDLLSYMDMSQYANRRSSDISGGEQQRVAICRAIANKPLIILADEPTGNLDLKTA 182
A +RA +LL + ++ A+R + ++S G+Q+R+ I RA+A P ++L DEP L+ +
Sbjct: 120 ARERAEELLERVGLADLADRPAGELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEET 179
Query: 183 QQVFSILKYLVVRSGLAALIATHNHDLASQMDRQITI 219
+++ +++ L G+ L+ H+ D+ + ++T+
Sbjct: 180 EELAELIREL-RERGITVLLVEHDMDVVMSLADRVTV 215