RPSBLAST alignment for GI: 254780871 and conserved domain: cd03224

>gnl|CDD|72983 cd03224, ABC_TM1139_LivF_branched, LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.. Length = 222
 Score =  105 bits (264), Expect = 9e-24
 Identities = 58/223 (26%), Positives = 112/223 (50%), Gaps = 16/223 (7%)

Query: 7   LLLQNVKHSYRQVGKPFPVLENVHLSLKKGEIVALVSPSGTGKSTILH-IAGLLEVPDQG 65
           L ++N+   Y +      +L  V L++ +GEIVAL+  +G GK+T+L  I GLL  P  G
Sbjct: 1   LEVENLNAGYGK----SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLP-PRSG 55

Query: 66  NVIIANQLCNKLSDDKKSFLRCSKIGFVYQEHRLLMDFSVIENIIFPQIIAGINHKTAYQ 125
           ++    +    L   +++      IG+V +  R+  + +V EN+    + A    +   +
Sbjct: 56  SIRFDGRDITGLPPHERARA---GIGYVPEGRRIFPELTVEENL---LLGAYARRRAKRK 109

Query: 126 RAMDLLSYM--DMSQYANRRSSDISGGEQQRVAICRAIANKPLIILADEPTGNLDLKTAQ 183
             ++ +  +   + +   + +  +SGGEQQ +AI RA+ ++P ++L DEP+  L  K  +
Sbjct: 110 ARLERVYELFPRLKERRKQLAGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVE 169

Query: 184 QVFSILKYLVVRSGLAALIATHNHDLASQM-DRQITIRDGMIA 225
           ++F  ++ L    G+  L+   N   A ++ DR   +  G + 
Sbjct: 170 EIFEAIREL-RDEGVTILLVEQNARFALEIADRAYVLERGRVV 211