RPSBLAST alignment for GI: 254780871 and conserved domain: cd03228
>gnl|CDD|72987 cd03228, ABCC_MRP_Like, The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 171
Score = 112 bits (283), Expect = 6e-26
Identities = 63/215 (29%), Positives = 94/215 (43%), Gaps = 48/215 (22%)
Query: 9 LQNVKHSYRQVGKPFPVLENVHLSLKKGEIVALVSPSGTGKSTILH-IAGLLEVPDQGNV 67
+NV SY G+P PVL++V L++K GE VA+V PSG+GKST+L + L + P G +
Sbjct: 3 FKNVSFSYP--GRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYD-PTSGEI 59
Query: 68 IIANQLCNKLSDDKKSFLRCSKIGFVYQEHRLLMDFSVIENIIFPQIIAGINHKTAYQRA 127
+I L + I +V Q+ L ++ ENI
Sbjct: 60 LIDGVDLRDLDLES----LRKNIAYVPQDP-FLFSGTIRENI------------------ 96
Query: 128 MDLLSYMDMSQYANRRSSDISGGEQQRVAICRAIANKPLIILADEPTGNLDLKTAQQVFS 187
+SGG++QR+AI RA+ P I++ DE T LD +T +
Sbjct: 97 -------------------LSGGQRQRIAIARALLRDPPILILDEATSALDPETEALILE 137
Query: 188 ILKYLVVRSGLAALIATHNHDLASQMDRQITIRDG 222
L+ L G ++ H DR I + DG
Sbjct: 138 ALRAL--AKGKTVIVIAHRLSTIRDADRIIVLDDG 170