RPSBLAST alignment for GI: 254780871 and conserved domain: cd03231
>gnl|CDD|72990 cd03231, ABC_CcmA_heme_exporter, CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.. Length = 201
Score = 66.5 bits (162), Expect = 5e-12
Identities = 44/198 (22%), Positives = 82/198 (41%), Gaps = 17/198 (8%)
Query: 25 VLENVHLSLKKGEIVALVSPSGTGKSTILHIAGLLEVPDQGNVIIANQLCNKLSDDKKSF 84
+ + +L GE + + P+G+GK+T+L I L P G V++ + D
Sbjct: 15 LFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQRDSIAR- 73
Query: 85 LRCSKIGFVYQEHRLLMD--FSVIENIIFPQIIAGINHKTAYQRAMDLLSYMDMSQYANR 142
G +Y H + SV+EN+ F + + A+ + ++ + +R
Sbjct: 74 ------GLLYLGHAPGIKTTLSVLENLRF---WHADHSDEQVEEALA---RVGLNGFEDR 121
Query: 143 RSSDISGGEQQRVAICRAIANKPLIILADEPTGNLDLKTAQQVFSILKYLVVRSGLAALI 202
+ +S G+Q+RVA+ R + + + + DEPT LD + + R G ++
Sbjct: 122 PVAQLSAGQQRRVALARLLLSGRPLWILDEPTTALDKAGVARFAEAMAGHCARGG-MVVL 180
Query: 203 ATHNHDLASQMDRQITIR 220
TH DL +
Sbjct: 181 TTH-QDLGLSEAGARELD 197