>gnl|CDD|72991 cd03232, ABC_PDR_domain2, The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 192

Score = 62.9 bits (153), Expect = 7e-11 Identities = 56/225 (24%), Positives = 95/225 (42%), Gaps = 50/225 (22%) Query: 6 VLLLQNVKHSYRQVGKPFPVLENVHLSLKKGEIVALVSPSGTGKSTILHI------AGLL 59 VL +N+ ++ G +L N+ +K G + AL+ SG GK+T+L + AG++ Sbjct: 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVI 62 Query: 60 EVPDQGNVIIANQLCNKLSDDKKSFLRCSKIGFVYQEHRLLMDFSVIENIIFPQIIAGIN 119 G ++I + K+F R G+V Q+ + +V E + F ++ G+ Sbjct: 63 T----GEILINGRP------LDKNFQR--STGYVEQQDVHSPNLTVREALRFSALLRGL- 109 Query: 120 HKTAYQRAMDLLSYMDMSQYANRRSSDISGGEQQRVAICRAIANKPLIILADEPTGNLDL 179 + QR +R+ I +A KP I+ DEPT LD Sbjct: 110 --SVEQR--------------------------KRLTIGVELAAKPSILFLDEPTSGLDS 141 Query: 180 KTAQQVFSILKYLVVRSGLAALIATH--NHDLASQMDRQITIRDG 222 + A + LK L SG A L H + + + DR + ++ G Sbjct: 142 QAAYNIVRFLKKL-ADSGQAILCTIHQPSASIFEKFDRLLLLKRG 185

RPSBLAST alignment for GI: 254780871 and conserved domain: cd03232