RPSBLAST alignment for GI: 254780871 and conserved domain: cd03233
>gnl|CDD|72992 cd03233, ABC_PDR_domain1, The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 202
Score = 59.8 bits (145), Expect = 6e-10
Identities = 44/223 (19%), Positives = 87/223 (39%), Gaps = 32/223 (14%)
Query: 5 EVLLLQNVKHSYRQVGKP-FPVLENVHLSLKKGEIVALVSPSGTGKSTIL-HIAGLLEVP 62
L G+ P+L++ +K GE+V ++ G+G ST+L +A E
Sbjct: 1 ASTLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTE-- 58
Query: 63 DQGNVIIANQLCNKLSDDKKSFLRC-SKIGFVYQEHRLLMDFSVIENIIFPQIIAGINHK 121
GNV + + K+ + +I +V +E +V E + F G
Sbjct: 59 --GNVSVEGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCKG---- 112
Query: 122 TAYQRAMDLLSYMDMSQYANRRSSDISGGEQQRVAICRAIANKPLIILADEPTGNLDLKT 181
N ISGGE++RV+I A+ ++ ++ D T LD T
Sbjct: 113 -------------------NEFVRGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSST 153
Query: 182 AQQVFSILKYLVVRSGLAALIATH--NHDLASQMDRQITIRDG 222
A ++ ++ + ++ + + ++ D+ + + +G
Sbjct: 154 ALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEG 196