>gnl|CDD|72997 cd03238, ABC_UvrA, The excision repair protein UvrA; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep ATP-dependent reaction that requires the UvrA, UvrB, and UvrC proteins. Both UvrA and UvrB are ATPases, with UvrA having two ATP binding sites, which have the characteristic signature of the family of ABC proteins, and UvrB having one ATP binding site that is structurally related to that of helicases.. Length = 176

Score = 47.2 bits (112), Expect = 4e-06 Identities = 43/196 (21%), Positives = 76/196 (38%), Gaps = 47/196 (23%) Query: 26 LENVHLSLKKGEIVALVSPSGTGKSTILHIAGLLEVPDQGNVIIANQLCNKLSDDKKSFL 85 L+N+ +S+ +V + SG+GKST++ N + +L F Sbjct: 11 LQNLDVSIPLNVLVVVTGVSGSGKSTLV------------NEGLYASGKARLISFLPKFS 58 Query: 86 RCSKIGFVYQEHRLLMDFSVIENIIFPQIIAGINHKTAYQRAMDLLSYMDMSQYANRRSS 145 R +K+ F+ Q L I G+ + T ++ S Sbjct: 59 R-NKLIFIDQLQFL--------------IDVGLGYLTL-----------------GQKLS 86 Query: 146 DISGGEQQRVAICRAIAN--KPLIILADEPTGNLDLKTAQQVFSILKYLVVRSGLAALIA 203 +SGGE QRV + + + + + DEP+ L + Q+ ++K L + G ++ Sbjct: 87 TLSGGELQRVKLASELFSEPPGTLFILDEPSTGLHQQDINQLLEVIKGL-IDLGNTVILI 145 Query: 204 THNHDLASQMDRQITI 219 HN D+ S D I Sbjct: 146 EHNLDVLSSADWIIDF 161

RPSBLAST alignment for GI: 254780871 and conserved domain: cd03238