RPSBLAST alignment for GI: 254780871 and conserved domain: cd03279

>gnl|CDD|73038 cd03279, ABC_sbcCD, SbcCD and other Mre11/Rad50 (MR) complexes are implicated in the metabolism of DNA ends. They cleave ends sealed by hairpin structures and are thought to play a role in removing protein bound to DNA termini.. Length = 213

 Score = 40.2 bits (94), Expect = 5e-04
 Identities = 36/201 (17%), Positives = 73/201 (36%), Gaps = 30/201 (14%)

Query: 32  SLKKGEIVALVSPSGTGKSTILHIAGLLEVPDQGNVIIANQLCNKLSDDKKSFLRCSKIG 91
            L    +  +  P+G GKSTIL               I   L  K     +     S   
Sbjct: 24  GLDNNGLFLICGPTGAGKSTILD-------------AITYALYGKTPRYGRQENLRSVFA 70

Query: 92  FVYQEHRLLMDFSVIENIIFPQII--AGINHKTAYQRAMDLLSYMDMSQYANRRSSDISG 149
                  +   F +       ++    G+++   + R + LL   +  ++  R  S +SG
Sbjct: 71  PGEDTAEVSFTFQL--GGKKYRVERSRGLDYDQ-FTRIV-LLPQGEFDRFLARPVSTLSG 126

Query: 150 GEQQRVAICRAIANKPLI----------ILADEPTGNLDLKTAQQVFSILKYLVVRSGLA 199
           GE    ++  A+A   ++          +  DE  G LD +  + V + L+ L+      
Sbjct: 127 GETFLASLSLALALSEVLQNRGGARLEALFIDEGFGTLDPEALEAVATALE-LIRTENRM 185

Query: 200 ALIATHNHDLASQMDRQITIR 220
             + +H  +L  ++ +++ + 
Sbjct: 186 VGVISHVEELKERIPQRLEVI 206