HHsearch alignment for GI: 254780872 and conserved domain: COG0030

>COG0030 KsgA Dimethyladenosine transferase (rRNA methylation) [Translation, ribosomal structure and biogenesis].
Probab=98.16  E-value=3.6e-06  Score=58.93  Aligned_cols=70  Identities=21%  Similarity=0.223  Sum_probs=54.5

Q ss_pred             HCCEEEECCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CHHHHEE
Q ss_conf             1628885698569999997319816995213567788886531011211112210012321115-3013001
Q gi|254780872|r   67 GLRILDLGCGGGLLSEPMAQMGATVTGIDPSTKNIAIAKNHANMKNINIDYRVSCAEEIAETDE-KFDIILN  137 (254)
Q Consensus        67 g~~VLDiGCG~G~~s~~la~~g~~V~giD~S~~~i~~Ak~~a~~~~~~i~~~~~~~~~l~~~~~-~FD~V~~  137 (254)
T Consensus        31 ~d~VlEIGpG~GaLT~~Ll~~~~~v~aiEiD~~l~~~L~~~~~-~~~n~~vi~~DaLk~d~~~l~~~~~vVa  101 (259)
T COG0030          31 GDNVLEIGPGLGALTEPLLERAARVTAIEIDRRLAEVLKERFA-PYDNLTVINGDALKFDFPSLAQPYKVVA  101 (259)
T ss_pred             CCEEEEECCCCCHHHHHHHHHCCEEEEEEECHHHHHHHHHHHC-CCCCEEEEECCHHCCCCHHHCCCCEEEE
T ss_conf             9869997898778899999606957999968899999997506-5665599947242475135157888998