HHsearch alignment for GI: 254780872 and conserved domain: COG0030
>COG0030 KsgA Dimethyladenosine transferase (rRNA methylation) [Translation, ribosomal structure and biogenesis].
Probab=98.16 E-value=3.6e-06 Score=58.93 Aligned_cols=70 Identities=21% Similarity=0.223 Sum_probs=54.5
Q ss_pred HCCEEEECCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CHHHHEE
Q ss_conf 1628885698569999997319816995213567788886531011211112210012321115-3013001
Q gi|254780872|r 67 GLRILDLGCGGGLLSEPMAQMGATVTGIDPSTKNIAIAKNHANMKNINIDYRVSCAEEIAETDE-KFDIILN 137 (254)
Q Consensus 67 g~~VLDiGCG~G~~s~~la~~g~~V~giD~S~~~i~~Ak~~a~~~~~~i~~~~~~~~~l~~~~~-~FD~V~~ 137 (254)
T Consensus 31 ~d~VlEIGpG~GaLT~~Ll~~~~~v~aiEiD~~l~~~L~~~~~-~~~n~~vi~~DaLk~d~~~l~~~~~vVa 101 (259)
T COG0030 31 GDNVLEIGPGLGALTEPLLERAARVTAIEIDRRLAEVLKERFA-PYDNLTVINGDALKFDFPSLAQPYKVVA 101 (259)
T ss_pred CCEEEEECCCCCHHHHHHHHHCCEEEEEEECHHHHHHHHHHHC-CCCCEEEEECCHHCCCCHHHCCCCEEEE
T ss_conf 9869997898778899999606957999968899999997506-5665599947242475135157888998