HHsearch alignment for GI: 254780872 and conserved domain: COG0742

>COG0742 N6-adenine-specific methylase [DNA replication, recombination, and repair].
Probab=97.98  E-value=4.8e-05  Score=51.97  Aligned_cols=118  Identities=15%  Similarity=0.175  Sum_probs=76.4

Q ss_pred             HHHHHHHHCCCCCCCCCCHHHCCEEEECCCHHHHHH-HHHHCCCCEEEECCHHHHHHHHHHHHHCCC--CCCCCCCCCCC
Q ss_conf             999988651876444588001628885698569999-997319816995213567788886531011--21111221001
Q gi|254780872|r   47 IQDKIMQHFQCKSDDTHPFKGLRILDLGCGGGLLSE-PMAQMGATVTGIDPSTKNIAIAKNHANMKN--INIDYRVSCAE  123 (254)
Q Consensus        47 I~~~i~~~~~~~~~~~~~l~g~~VLDiGCG~G~~s~-~la~~g~~V~giD~S~~~i~~Ak~~a~~~~--~~i~~~~~~~~  123 (254)
T Consensus        29 VREalFNil~~~-----~i~g~~~LDlFAGSGaLGlEAlSRGA~~~~~vE~~~~a~~~l~~N~~~l~~~~~~~~~~~da~  103 (187)
T COG0742          29 VREALFNILAPD-----EIEGARVLDLFAGSGALGLEALSRGAARVVFVEKDRKAVKILKENLKALGLEGEARVLRNDAL  103 (187)
T ss_pred             HHHHHHHHCCCC-----CCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECHH
T ss_conf             889999873434-----457988999468764768999857885699996598999999999998487612599840089


Q ss_pred             CC-CCCCC--CHHHHEECCCHHC-CCCHHHHHHH--HHHHCCCCCEEEEECC
Q ss_conf             23-21115--3013001243102-6888899888--8752133321577436
Q gi|254780872|r  124 EI-AETDE--KFDIILNMEVIEH-VDNIPYFIKT--CCSLLLSNGLMFISTI  169 (254)
Q Consensus       124 ~l-~~~~~--~FD~V~~~~vleH-v~d~~~~l~~--~~~~LkpgG~liist~  169 (254)
T Consensus       104 ~~L~~~~~~~~FDlVflDPPy~~~l~~~~~~~~~~~~~~~L~~~~~iv~E~~  155 (187)
T COG0742         104 RALKQLGTREPFDLVFLDPPYAKGLLDKELALLLLEENGWLKPGALIVVEHD  155 (187)
T ss_pred             HHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEC
T ss_conf             9987227788512899689975360668999988876587788968999827