HHsearch alignment for GI: 254780872 and conserved domain: COG1041

>COG1041 Predicted DNA modification methylase [DNA replication, recombination, and repair].
Probab=98.74  E-value=2.7e-08  Score=72.09  Aligned_cols=104  Identities=22%  Similarity=0.241  Sum_probs=80.7

Q ss_pred             HHCCEEEECCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCC-CC-CCCCCCCCCCCCCCCHHHHEEC---CC
Q ss_conf             0162888569856999999731981699521356778888653101121-11-1221001232111530130012---43
Q gi|254780872|r   66 KGLRILDLGCGGGLLSEPMAQMGATVTGIDPSTKNIAIAKNHANMKNIN-ID-YRVSCAEEIAETDEKFDIILNM---EV  140 (254)
Q Consensus        66 ~g~~VLDiGCG~G~~s~~la~~g~~V~giD~S~~~i~~Ak~~a~~~~~~-i~-~~~~~~~~l~~~~~~FD~V~~~---~v  140 (254)
T Consensus       197 ~G~~vlDPFcGTGgiLiEagl~G~~viG~Did~~mv~gak~Nl~~y~i~~~~~~~~~Da~~lpl~~~~vdaIatDPPYGr  276 (347)
T COG1041         197 RGELVLDPFCGTGGILIEAGLMGARVIGSDIDERMVRGAKINLEYYGIEDYPVLKVLDATNLPLRDNSVDAIATDPPYGR  276 (347)
T ss_pred             CCCEEECCCCCCCHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCC
T ss_conf             69876457678348888366427567603237999855664156627676168873022127788774235884699871


Q ss_pred             HH--CC---CC-HHHHHHHHHHHCCCCCEEEEECC
Q ss_conf             10--26---88-88998888752133321577436
Q gi|254780872|r  141 IE--HV---DN-IPYFIKTCCSLLLSNGLMFISTI  169 (254)
Q Consensus       141 le--Hv---~d-~~~~l~~~~~~LkpgG~liist~  169 (254)
T Consensus       277 st~~~~~~l~~Ly~~~le~~~evLk~gG~~vf~~p  311 (347)
T COG1041         277 STKIKGEGLDELYEEALESASEVLKPGGRIVFAAP  311 (347)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECC
T ss_conf             00245552899999999999987304848999617