HHsearch alignment for GI: 254780872 and conserved domain: COG1889

>COG1889 NOP1 Fibrillarin-like rRNA methylase [Translation, ribosomal structure and biogenesis].
Probab=97.29  E-value=0.004  Score=40.04  Aligned_cols=142  Identities=17%  Similarity=0.271  Sum_probs=83.3

Q ss_pred             HHCCEEEECCCHHHHHHHHHHC-C-CCEEEECCHHHHHH----HHHHHHHCCCCCCCCCCCCCCCC---CCCCCCHHHHE
Q ss_conf             0162888569856999999731-9-81699521356778----88865310112111122100123---21115301300
Q gi|254780872|r   66 KGLRILDLGCGGGLLSEPMAQM-G-ATVTGIDPSTKNIA----IAKNHANMKNINIDYRVSCAEEI---AETDEKFDIIL  136 (254)
Q Consensus        66 ~g~~VLDiGCG~G~~s~~la~~-g-~~V~giD~S~~~i~----~Ak~~a~~~~~~i~~~~~~~~~l---~~~~~~FD~V~  136 (254)
T Consensus        76 ~g~~VLYLGAasGTTvSHVSDIv~~G~iYaVEfs~R~~reLl~~a~~-----R~Ni~PIL~DA~~P~~Y~~~Ve~VDviy  150 (231)
T COG1889          76 EGSKVLYLGAASGTTVSHVSDIVGEGRIYAVEFSPRPMRELLDVAEK-----RPNIIPILEDARKPEKYRHLVEKVDVIY  150 (231)
T ss_pred             CCCEEEEEECCCCCCHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHH-----CCCCEEEECCCCCCHHHHHHCCCCCEEE
T ss_conf             99878995036798576777604787089999644469999999874-----7874002013688377653124543899


Q ss_pred             ECCCHHCCCCH---HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHC
Q ss_conf             12431026888---899888875213332157743676602456415655431046789985712253889999999986
Q gi|254780872|r  137 NMEVIEHVDNI---PYFIKTCCSLLLSNGLMFISTINRNLKAMLLAIIGAEYLLQWLPKGTHQYDKFIKPTEMECFLAAN  213 (254)
Q Consensus       137 ~~~vleHv~d~---~~~l~~~~~~LkpgG~liist~Nr~~~s~~~~i~~ae~il~~~P~gtH~~~~Fi~p~el~~~l~~~  213 (254)
T Consensus       151 ~-----DVAQp~Qa~I~~~Na~~FLk~~G~~~i~iKArSIdv------------------T~dp~~-vf-~~ev~kL~~~  205 (231)
T COG1889         151 Q-----DVAQPNQAEILADNAEFFLKKGGYVVIAIKARSIDV------------------TADPEE-VF-KDEVEKLEEG  205 (231)
T ss_pred             E-----ECCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECCCC------------------CCCHHH-HH-HHHHHHHHHC
T ss_conf             8-----368810789999889973216973999998512304------------------589899-99-9999999856


Q ss_pred             CCEEEEEEEEEECCCCCEEEECCCCCCEEEEEEEEC
Q ss_conf             983888550576677775786478864517999975
Q gi|254780872|r  214 KVKIIDRVGVVYNVFCNKWQLSAKNMDVNYMVLGHL  249 (254)
Q Consensus       214 g~~~~~~~g~~~~p~~~~w~~~~~~~~vnY~~~~~k  249 (254)
T Consensus       206 ~f~i~e~~~L--ePye~-------D---H~~i~~~~  229 (231)
T COG1889         206 GFEILEVVDL--EPYEK-------D---HALIVAKY  229 (231)
T ss_pred             CCEEEEEECC--CCCCC-------C---EEEEEEEE
T ss_conf             9504677636--77666-------4---28999962