HHsearch alignment for GI: 254780872 and conserved domain: COG2519

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis].
Probab=99.27  E-value=1.2e-10  Score=86.79  Aligned_cols=100  Identities=16%  Similarity=0.273  Sum_probs=83.7

Q ss_pred             HHHCCEEEECCCHHHHHHHHHHC-C--CCEEEECCHHHHHHHHHHHHHCCCC-C-CCCCCCCCCCCCCCCCCHHHHEECC
Q ss_conf             00162888569856999999731-9--8169952135677888865310112-1-1112210012321115301300124
Q gi|254780872|r   65 FKGLRILDLGCGGGLLSEPMAQM-G--ATVTGIDPSTKNIAIAKNHANMKNI-N-IDYRVSCAEEIAETDEKFDIILNME  139 (254)
Q Consensus        65 l~g~~VLDiGCG~G~~s~~la~~-g--~~V~giD~S~~~i~~Ak~~a~~~~~-~-i~~~~~~~~~l~~~~~~FD~V~~~~  139 (254)
T Consensus        93 ~pg~rVlEAGtGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv~~~~~~~-~vDav~L--  169 (256)
T COG2519          93 SPGSRVLEAGTGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDVREGIDEE-DVDAVFL--  169 (256)
T ss_pred             CCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC-CCCEEEE--
T ss_conf             9887899815680599999999648884599999527899999999998424561378705400024655-4677997--


Q ss_pred             CHHCCCCHHHHHHHHHHHCCCCCEEEEECCC
Q ss_conf             3102688889988887521333215774367
Q gi|254780872|r  140 VIEHVDNIPYFIKTCCSLLLSNGLMFISTIN  170 (254)
Q Consensus       140 vleHv~d~~~~l~~~~~~LkpgG~liist~N  170 (254)
T Consensus       170 ---Dmp~PW~~le~~~~~Lkpgg~~~~y~P~  197 (256)
T COG2519         170 ---DLPDPWNVLEHVSDALKPGGVVVVYSPT  197 (256)
T ss_pred             ---CCCCHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf             ---5898489999999871799679998397