HHsearch alignment for GI: 254780872 and conserved domain: COG2813

>COG2813 RsmC 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis].
Probab=99.18  E-value=1.4e-10  Score=86.38  Aligned_cols=101  Identities=25%  Similarity=0.376  Sum_probs=76.5

Q ss_pred             HCCEEEECCCHHHHHHHHHHCC--CCEEEECCHHHHHHHHHHHHHCCCCCC-CCCCCCCCCCCCCCCCHHHHEECCCHHC
Q ss_conf             1628885698569999997319--816995213567788886531011211-1122100123211153013001243102
Q gi|254780872|r   67 GLRILDLGCGGGLLSEPMAQMG--ATVTGIDPSTKNIAIAKNHANMKNINI-DYRVSCAEEIAETDEKFDIILNMEVIEH  143 (254)
Q Consensus        67 g~~VLDiGCG~G~~s~~la~~g--~~V~giD~S~~~i~~Ak~~a~~~~~~i-~~~~~~~~~l~~~~~~FD~V~~~~vleH  143 (254)
T Consensus       159 ~~~vlDlGCG~Gvlg~~la~~~p~~~vtmvDvn~~Av~~ar~Nl~~N~~~~~~v~~s~~~~~--v~~kfd~IisNPPfh~  236 (300)
T COG2813         159 GGKVLDLGCGYGVLGLVLAKKSPQAKLTLVDVNARAVESARKNLAANGVENTEVWASNLYEP--VEGKFDLIISNPPFHA  236 (300)
T ss_pred             CCCEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCC--CCCCCCEEEECCCCCC
T ss_conf             99688707884299999998689872899826699999988769973987637998124466--5440068984888467


Q ss_pred             CCC-----HHHHHHHHHHHCCCCCEEEEECCC
Q ss_conf             688-----889988887521333215774367
Q gi|254780872|r  144 VDN-----IPYFIKTCCSLLLSNGLMFISTIN  170 (254)
Q Consensus       144 v~d-----~~~~l~~~~~~LkpgG~liist~N  170 (254)
T Consensus       237 G~~v~~~~~~~ii~~A~~~L~~gGeL~iV-an  267 (300)
T COG2813         237 GKAVVHSLAQEIIAAAARHLKPGGELWIV-AN  267 (300)
T ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCEEEEE-EC
T ss_conf             71016788999999999760459779999-75