HHsearch alignment for GI: 254780872 and conserved domain: COG2890

>COG2890 HemK Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis].
Probab=99.32  E-value=1.6e-11  Score=92.08  Aligned_cols=121  Identities=22%  Similarity=0.418  Sum_probs=84.1

Q ss_pred             CEEEECCCHHHHHHHHHHCC--CCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHEEC------C-
Q ss_conf             28885698569999997319--81699521356778888653101121111221001232111530130012------4-
Q gi|254780872|r   69 RILDLGCGGGLLSEPMAQMG--ATVTGIDPSTKNIAIAKNHANMKNINIDYRVSCAEEIAETDEKFDIILNM------E-  139 (254)
Q Consensus        69 ~VLDiGCG~G~~s~~la~~g--~~V~giD~S~~~i~~Ak~~a~~~~~~i~~~~~~~~~l~~~~~~FD~V~~~------~-  139 (254)
T Consensus       113 ~ilDlGTGSG~iai~la~~~~~~~V~a~Dis~~Al~~A~~Na~~~~l-~~~~~~~~dlf~~~~~~fDlIVsNPPYip~~~  191 (280)
T COG2890         113 RILDLGTGSGAIAIALAKEGPDAEVIAVDISPDALALARENAERNGL-VRVLVVQSDLFEPLRGKFDLIVSNPPYIPAED  191 (280)
T ss_pred             CEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCC-CCEEEEECCHHHCCCCCCCEEEECCCCCCCCC
T ss_conf             18996588319999999618988799998999999999999998289-74798740033346888577996899888852


Q ss_pred             ------CHHC------------CCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCC
Q ss_conf             ------3102------------6888899888875213332157743676602456415655431046789985712253
Q gi|254780872|r  140 ------VIEH------------VDNIPYFIKTCCSLLLSNGLMFISTINRNLKAMLLAIIGAEYLLQWLPKGTHQYDKFI  201 (254)
Q Consensus       140 ------vleH------------v~d~~~~l~~~~~~LkpgG~liist~Nr~~~s~~~~i~~ae~il~~~P~gtH~~~~Fi  201 (254)
T Consensus       192 ~~~~~~~~~~EP~~Al~~g~dGl~~~~~i~~~a~~~l~~~g~l~le~-------------------g--------~~---  241 (280)
T COG2890         192 PELLPEVVRYEPLLALVGGGDGLEVYRRILGEAPDILKPGGVLILEI-------------------G--------LT---  241 (280)
T ss_pred             CCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE-------------------C--------CC---
T ss_conf             11374213589799872487778999999998998728682899997-------------------6--------98---


Q ss_pred             CHHHHHHHHHHCC-CEEEEE
Q ss_conf             8899999999869-838885
Q gi|254780872|r  202 KPTEMECFLAANK-VKIIDR  220 (254)
Q Consensus       202 ~p~el~~~l~~~g-~~~~~~  220 (254)
T Consensus       242 q~~~v~~~~~~~~~~~~v~~  261 (280)
T COG2890         242 QGEAVKALFEDTGFFEIVET  261 (280)
T ss_pred             CHHHHHHHHHHCCCCEEEEE
T ss_conf             48999999997498447665