HHsearch alignment for GI: 254780872 and conserved domain: COG4076
>COG4076 Predicted RNA methylase [General function prediction only].
Probab=97.57 E-value=0.00021 Score=48.02 Aligned_cols=110 Identities=20% Similarity=0.288 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEECCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCC-CCCCCCC
Q ss_conf 659999999886518764445880016288856985699999973198169952135677888865310112-1111221
Q gi|254780872|r 42 VRIKYIQDKIMQHFQCKSDDTHPFKGLRILDLGCGGGLLSEPMAQMGATVTGIDPSTKNIAIAKNHANMKNI-NIDYRVS 120 (254)
Q Consensus 42 ~R~~~I~~~i~~~~~~~~~~~~~l~g~~VLDiGCG~G~~s~~la~~g~~V~giD~S~~~i~~Ak~~a~~~~~-~i~~~~~ 120 (254)
T Consensus 19 eRlavF~~ai~~va~-----------d~~~DLGaGsGiLs~~Aa~~A~rViAiE~dPk~a~~a~eN~~v~g~~n~evv~g 87 (252)
T COG4076 19 ERLAVFTSAIAEVAE-----------DTFADLGAGSGILSVVAAHAAERVIAIEKDPKRARLAEENLHVPGDVNWEVVVG 87 (252)
T ss_pred HHHHHHHHHHHHHHH-----------HCEEECCCCCCHHHHHHHHHHCEEEEEECCCHHHHHHHHCCCCCCCCCEEEEEC
T ss_conf 999999999999864-----------105634688632889887532027887418078777650577788764689805
Q ss_pred CCCCCCCCCCCHHHHEECCCHHC--C-CCHHHHHHHHHHHCCCCCEEE
Q ss_conf 00123211153013001243102--6-888899888875213332157
Q gi|254780872|r 121 CAEEIAETDEKFDIILNMEVIEH--V-DNIPYFIKTCCSLLLSNGLMF 165 (254)
Q Consensus 121 ~~~~l~~~~~~FD~V~~~~vleH--v-~d~~~~l~~~~~~LkpgG~li 165 (254)
T Consensus 88 DA~~y~f--e~ADvvic-EmlDTaLi~E~qVpV~n~vleFLr~d~tii 132 (252)
T COG4076 88 DARDYDF--ENADVVIC-EMLDTALIEEKQVPVINAVLEFLRYDPTII 132 (252)
T ss_pred CCCCCCC--CCCCEEHH-HHHHHHHHCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 5321332--34534087-776677633421289999999863388252