HHsearch alignment for GI: 254780872 and conserved domain: COG4262
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only].
Probab=97.94 E-value=8e-05 Score=50.56 Aligned_cols=135 Identities=16% Similarity=0.262 Sum_probs=84.1
Q ss_pred CCEEEECCCHHHHHHHHHHCC--CCEEEECCHHHHHHHHHHHHHCC--------CCCCCCCCCCCCCC-CCCCCCHHHHE
Q ss_conf 628885698569999997319--81699521356778888653101--------12111122100123-21115301300
Q gi|254780872|r 68 LRILDLGCGGGLLSEPMAQMG--ATVTGIDPSTKNIAIAKNHANMK--------NINIDYRVSCAEEI-AETDEKFDIIL 136 (254)
Q Consensus 68 ~~VLDiGCG~G~~s~~la~~g--~~V~giD~S~~~i~~Ak~~a~~~--------~~~i~~~~~~~~~l-~~~~~~FD~V~ 136 (254)
T Consensus 291 ~~vLvlGGGDGLAlRellkyP~~~qI~lVdLDP~miela~~~~vlr~~N~~sf~dpRv~Vv~dDAf~wlr~a~~~fD~vI 370 (508)
T COG4262 291 RSVLVLGGGDGLALRELLKYPQVEQITLVDLDPRMIELASHATVLRALNQGSFSDPRVTVVNDDAFQWLRTAADMFDVVI 370 (508)
T ss_pred CEEEEECCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHCCCCCEEE
T ss_conf 26999728751879999718885527897438899987300267666036776687569996547889974134555799
Q ss_pred ECCCHHCCCCH----------HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHH
Q ss_conf 12431026888----------89988887521333215774367660245641565543104678998571225388999
Q gi|254780872|r 137 NMEVIEHVDNI----------PYFIKTCCSLLLSNGLMFISTINRNLKAMLLAIIGAEYLLQWLPKGTHQYDKFIKPTEM 206 (254)
Q Consensus 137 ~~~vleHv~d~----------~~~l~~~~~~LkpgG~liist~Nr~~~s~~~~i~~ae~il~~~P~gtH~~~~Fi~p~el 206 (254)
T Consensus 371 V-----Dl~DP~tps~~rlYS~eFY~ll~~~l~e~Gl~VvQags--~--y------------~tp------~vfw---~i 420 (508)
T COG4262 371 V-----DLPDPSTPSIGRLYSVEFYRLLSRHLAETGLMVVQAGS--P--Y------------FTP------RVFW---RI 420 (508)
T ss_pred E-----ECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCC--C--C------------CCC------CEEE---EE
T ss_conf 9-----68998995134321089999999733757549995488--7--6------------577------3011---20
Q ss_pred HHHHHHCCCEEEEEEEEEECCCCCEEEE
Q ss_conf 9999986983888550576677775786
Q gi|254780872|r 207 ECFLAANKVKIIDRVGVVYNVFCNKWQL 234 (254)
Q Consensus 207 ~~~l~~~g~~~~~~~g~~~~p~~~~w~~ 234 (254)
T Consensus 421 ~aTik~AG~~~~Pyh--v~VPTFGeWGf 446 (508)
T COG4262 421 DATIKSAGYRVWPYH--VHVPTFGEWGF 446 (508)
T ss_pred HHHHHHCCCEEEEEE--EECCCCCCCCE
T ss_conf 547873762553248--95476553112