HHsearch alignment for GI: 254780872 and conserved domain: KOG1540

>KOG1540 consensus.
Probab=99.85  E-value=1.9e-20  Score=147.43  Aligned_cols=200  Identities=18%  Similarity=0.287  Sum_probs=136.9

Q ss_pred             CCCCCHHHHHH-----HHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEECCCHHHHHH
Q ss_conf             67898899999-----9999887468888712677517565999999988651876444588001628885698569999
Q gi|254780872|r    8 YTTKNQDAINQ-----FSNIASEWWEPTGKFKPLHQINPVRIKYIQDKIMQHFQCKSDDTHPFKGLRILDLGCGGGLLSE   82 (254)
Q Consensus         8 ~~t~~~~ei~~-----F~~~a~~WwD~~g~~~~Lh~~N~~R~~~I~~~i~~~~~~~~~~~~~l~g~~VLDiGCG~G~~s~   82 (254)
T Consensus        50 f~tV~e~eke~~V~~vF~~vA~~Y-D---------~mND~mSlGiHRlWKd~~---v~~L~p~~~m~~lDvaGGTGDiaF  116 (296)
T KOG1540          50 FKTVRESEKERLVHHVFESVAKKY-D---------IMNDAMSLGIHRLWKDMF---VSKLGPGKGMKVLDVAGGTGDIAF  116 (296)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHH-H---------HHHHHHHCCHHHHHHHHH---HHCCCCCCCCEEEEECCCCCHHHH
T ss_conf             120365553348999999888888-7---------788876212367888876---621587778758983477525677


Q ss_pred             HHHHC--------CCCEEEECCHHHHHHHHHHHHHCCCCC----CCCCCCCCCCCCCCCCCHHHHEECCCHHCCCCHHHH
Q ss_conf             99731--------981699521356778888653101121----111221001232111530130012431026888899
Q gi|254780872|r   83 PMAQM--------GATVTGIDPSTKNIAIAKNHANMKNIN----IDYRVSCAEEIAETDEKFDIILNMEVIEHVDNIPYF  150 (254)
Q Consensus        83 ~la~~--------g~~V~giD~S~~~i~~Ak~~a~~~~~~----i~~~~~~~~~l~~~~~~FD~V~~~~vleHv~d~~~~  150 (254)
T Consensus       117 ril~~v~s~~~~~~~~V~v~Dinp~mL~vgkqRa~~~~l~~~~~~~w~~~dAE~LpFdd~s~D~yTiafGIRN~th~~k~  196 (296)
T KOG1540         117 RILRHVKSQFGDRESKVTVLDINPHMLAVGKQRAKKRPLKASSRVEWVEGDAEDLPFDDDSFDAYTIAFGIRNVTHIQKA  196 (296)
T ss_pred             HHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCEECCCCHHHH
T ss_conf             79876113457777617999389899999987775159776871699947701089997751158884211147877899


Q ss_pred             HHHHHHHCCCCCEEEEE---CCCCCCHHHHHHHHHHHHHCCCCCC-CC------CCH-------HHCCCHHHHHHHHHHC
Q ss_conf             88887521333215774---3676602456415655431046789-98------571-------2253889999999986
Q gi|254780872|r  151 IKTCCSLLLSNGLMFIS---TINRNLKAMLLAIIGAEYLLQWLPK-GT------HQY-------DKFIKPTEMECFLAAN  213 (254)
Q Consensus       151 l~~~~~~LkpgG~liis---t~Nr~~~s~~~~i~~ae~il~~~P~-gt------H~~-------~~Fi~p~el~~~l~~~  213 (254)
T Consensus       197 l~EAYRVLKpGGrf~cLeFskv~~~~l~~fy~~ys----f~VlpvlG~~iagd~~sYqYLveSI~rfp~qe~f~~mieda  272 (296)
T KOG1540         197 LREAYRVLKPGGRFSCLEFSKVENEPLKWFYDQYS----FDVLPVLGEIIAGDRKSYQYLVESIRRFPPQEEFASMIEDA  272 (296)
T ss_pred             HHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHH----HHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
T ss_conf             99998752778679999735454077899997122----23211055766521765454776650699889999999972


Q ss_pred             CCEEEE-EEEEE
Q ss_conf             983888-55057
Q gi|254780872|r  214 KVKIID-RVGVV  224 (254)
Q Consensus       214 g~~~~~-~~g~~  224 (254)
T Consensus       273 GF~~~~~ye~lt  284 (296)
T KOG1540         273 GFSSVNGYENLT  284 (296)
T ss_pred             CCCCCCCCCCCE
T ss_conf             875102304421