HHsearch alignment for GI: 254780872 and conserved domain: KOG1541
>KOG1541 consensus.
Probab=99.36 E-value=4.9e-13 Score=101.50 Aligned_cols=99 Identities=22% Similarity=0.278 Sum_probs=76.3
Q ss_pred HHCCEEEECCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCC-CCCCCCCCCCCCCHHHHEECCCHHCC
Q ss_conf 01628885698569999997319816995213567788886531011211112-21001232111530130012431026
Q gi|254780872|r 66 KGLRILDLGCGGGLLSEPMAQMGATVTGIDPSTKNIAIAKNHANMKNINIDYR-VSCAEEIAETDEKFDIILNMEVIEHV 144 (254)
Q Consensus 66 ~g~~VLDiGCG~G~~s~~la~~g~~V~giD~S~~~i~~Ak~~a~~~~~~i~~~-~~~~~~l~~~~~~FD~V~~~~vleHv 144 (254)
T Consensus 50 ~~~~iLDIGCGsGLSg~vL~~~Gh~wiGvDiSpsML~~a~~~e~e----gdlil~DMG~GlpfrpGtFDg~ISISAvQWL 125 (270)
T KOG1541 50 KSGLILDIGCGSGLSGSVLSDSGHQWIGVDISPSMLEQAVERELE----GDLILCDMGEGLPFRPGTFDGVISISAVQWL 125 (270)
T ss_pred CCCEEEEECCCCCCCHHEECCCCCEEEEECCCHHHHHHHHHHHHH----CCEEEEECCCCCCCCCCCCCEEEEEEEEEEE
T ss_conf 871799834577743200216895588622898999999976640----4766312478878899741247886203210
Q ss_pred -------CCH----HHHHHHHHHHCCCCCEEEEEC
Q ss_conf -------888----899888875213332157743
Q gi|254780872|r 145 -------DNI----PYFIKTCCSLLLSNGLMFIST 168 (254)
Q Consensus 145 -------~d~----~~~l~~~~~~LkpgG~liist 168 (254)
T Consensus 126 cnA~~s~~~P~~Rl~~FF~tLy~~l~rg~raV~Qf 160 (270)
T KOG1541 126 CNADKSLHVPKKRLLRFFGTLYSCLKRGARAVLQF 160 (270)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 14684446738999998664532103686158885