HHsearch alignment for GI: 254780872 and conserved domain: KOG3987
>KOG3987 consensus.
Probab=98.67 E-value=2e-08 Score=72.90 Aligned_cols=166 Identities=20% Similarity=0.225 Sum_probs=103.2
Q ss_pred HHCCEEEECCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHEECCCHHCCC
Q ss_conf 01628885698569999997319816995213567788886531011211112210012321115301300124310268
Q gi|254780872|r 66 KGLRILDLGCGGGLLSEPMAQMGATVTGIDPSTKNIAIAKNHANMKNINIDYRVSCAEEIAETDEKFDIILNMEVIEHVD 145 (254)
Q Consensus 66 ~g~~VLDiGCG~G~~s~~la~~g~~V~giD~S~~~i~~Ak~~a~~~~~~i~~~~~~~~~l~~~~~~FD~V~~~~vleHv~ 145 (254)
T Consensus 112 ~~~~lLDlGAGdGeit~~m~p~feevyATElS~tMr~rL~----kk~ynV----l~~~ew~~t~~k~dli~clNlLDRc~ 183 (288)
T KOG3987 112 EPVTLLDLGAGDGEITLRMAPTFEEVYATELSWTMRDRLK----KKNYNV----LTEIEWLQTDVKLDLILCLNLLDRCF 183 (288)
T ss_pred CCEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHH----HCCCCE----EEEHHHHHCCCEEEHHHHHHHHHHHC
T ss_conf 8706886167886100121421899999876699999986----527736----65003331372231588877887506
Q ss_pred CHHHHHHHHHHHCCC-CCEEEEECCCCCCH-HHHHHHHHH--H---HHCCCCCCCCCCHHHCCCHHHHHHHHHHCCCEEE
Q ss_conf 888998888752133-32157743676602-456415655--4---3104678998571225388999999998698388
Q gi|254780872|r 146 NIPYFIKTCCSLLLS-NGLMFISTINRNLK-AMLLAIIGA--E---YLLQWLPKGTHQYDKFIKPTEMECFLAANKVKII 218 (254)
Q Consensus 146 d~~~~l~~~~~~Lkp-gG~liist~Nr~~~-s~~~~i~~a--e---~il~~~P~gtH~~~~Fi~p~el~~~l~~~g~~~~ 218 (254)
T Consensus 184 ~p~kLL~Di~~vl~psngrvivaLVL--P~~hYVE~N~~g~~~rPdn~Le~--~G-r~~ee--~v~~~~e~lr~~g~~ve 256 (288)
T KOG3987 184 DPFKLLEDIHLVLAPSNGRVIVALVL--PYMHYVETNTSGLPLRPDNLLEN--NG-RSFEE--EVARFMELLRNCGYRVE 256 (288)
T ss_pred CHHHHHHHHHHHHCCCCCCEEEEEEE--CCCCEEECCCCCCCCCCHHHHHH--CC-CCHHH--HHHHHHHHHHHCCCHHH
T ss_conf 76779999999846478848999984--24211430789986880688873--58-53899--99889999986370244
Q ss_pred EEEEEEEC---CCCCEEEECCCCCCEEEEEEEECCCC
Q ss_conf 85505766---77775786478864517999975877
Q gi|254780872|r 219 DRVGVVYN---VFCNKWQLSAKNMDVNYMVLGHLPKT 252 (254)
Q Consensus 219 ~~~g~~~~---p~~~~w~~~~~~~~vnY~~~~~kp~~ 252 (254)
T Consensus 257 awTrlPYLCEGDm~ns~Y~L~-D-----aifvlkp~~ 287 (288)
T KOG3987 257 AWTRLPYLCEGDMHNSFYWLI-D-----AIFVLKPKT 287 (288)
T ss_pred HHHCCCEECCCCCCCCEEEEC-C-----EEEEECCCC
T ss_conf 551487212566566337722-2-----589955778