HHsearch alignment for GI: 254780872 and conserved domain: PRK00216
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed.
Probab=99.97 E-value=1e-30 Score=211.14 Aligned_cols=206 Identities=18% Similarity=0.281 Sum_probs=143.3
Q ss_pred HHHHH-HHHHHHHHCCCCCCCHHHHHHCHH---H-HHHHHHHHHHHCCCCCCCCCCHHHCCEEEECCCHHHHHHHHHHCC
Q ss_conf 99999-999988746888871267751756---5-999999988651876444588001628885698569999997319
Q gi|254780872|r 14 DAINQ-FSNIASEWWEPTGKFKPLHQINPV---R-IKYIQDKIMQHFQCKSDDTHPFKGLRILDLGCGGGLLSEPMAQMG 88 (254)
Q Consensus 14 ~ei~~-F~~~a~~WwD~~g~~~~Lh~~N~~---R-~~~I~~~i~~~~~~~~~~~~~l~g~~VLDiGCG~G~~s~~la~~g 88 (254)
T Consensus 11 ~~V~~~Fd~iA~~Y-D~---------~N~~~S~G~~~~Wr~~~v~~l-------~~~~g~~vLDvgcGTG~~~~~l~~~~ 73 (239)
T PRK00216 11 EKVAEVFDSIAPKY-DL---------MNDLLSFGLHRVWRRKTIKWL-------GVRPGDKVLDLACGTGDLAIALAKAV 73 (239)
T ss_pred HHHHHHHHHHHHHH-HH---------HHHHHCCCHHHHHHHHHHHHC-------CCCCCCEEEEECCCCCHHHHHHHHHC
T ss_conf 99999998878788-58---------766750751999999999862-------78999989884577638799999972
Q ss_pred ---CCEEEECCHHHHHHHHHHHHHCCCC--CCCCCCCCCCCCCCCCCCHHHHEECCCHHCCCCHHHHHHHHHHHCCCCCE
Q ss_conf ---8169952135677888865310112--11112210012321115301300124310268888998888752133321
Q gi|254780872|r 89 ---ATVTGIDPSTKNIAIAKNHANMKNI--NIDYRVSCAEEIAETDEKFDIILNMEVIEHVDNIPYFIKTCCSLLLSNGL 163 (254)
Q Consensus 89 ---~~V~giD~S~~~i~~Ak~~a~~~~~--~i~~~~~~~~~l~~~~~~FD~V~~~~vleHv~d~~~~l~~~~~~LkpgG~ 163 (254)
T Consensus 74 ~~~~~v~g~D~S~~ML~~A~~k~~~~~~~~~i~~~~~da~~lpf~d~sfD~v~~~f~l~~~~d~~~~l~E~~RVLkPGG~ 153 (239)
T PRK00216 74 GETGEVVGLDFSEGMLAVGREKLLDKGLSGNVEFVQGDAEALPFPDNSFDAVTIAFGLRNVPDIDKALREMYRVLKPGGR 153 (239)
T ss_pred CCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCEE
T ss_conf 99767999919889999999999973898885079823556888766676500261567148679999999987664808
Q ss_pred EEEE---CCCCCCHHHHHHHHHH---HHHCCCCCCCCCCH-------HHCCCHHHHHHHHHHCCCEEEEEEEEEECCCCC
Q ss_conf 5774---3676602456415655---43104678998571-------225388999999998698388855057667777
Q gi|254780872|r 164 MFIS---TINRNLKAMLLAIIGA---EYLLQWLPKGTHQY-------DKFIKPTEMECFLAANKVKIIDRVGVVYNVFCN 230 (254)
Q Consensus 164 liis---t~Nr~~~s~~~~i~~a---e~il~~~P~gtH~~-------~~Fi~p~el~~~l~~~g~~~~~~~g~~~~p~~~ 230 (254)
T Consensus 154 l~ilefs~p~~~~~~~~y~~Y~~~ilP~ig~~~~~~~~aY~YL~~Si~~fp~~~~~~~~l~~aGF~~v~~~~l~----~- 228 (239)
T PRK00216 154 LVILEFSKPTNPPLKKAYDFYLFKVLPLIGKLVSKNAEAYRYLAESIRAFPDQEELAAMMEEAGFERVKYRNLT----G- 228 (239)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECC----C-
T ss_conf 99997589997688999999999999999999719878887699999988899999999998799678899878----8-
Q ss_pred EEEECCCCCCEEEEEEEECC
Q ss_conf 57864788645179999758
Q gi|254780872|r 231 KWQLSAKNMDVNYMVLGHLP 250 (254)
Q Consensus 231 ~w~~~~~~~~vnY~~~~~kp 250 (254)
T Consensus 229 ---------Gi~~i~~~~Kp 239 (239)
T PRK00216 229 ---------GIVALHVGYKP 239 (239)
T ss_pred ---------CEEEEEEEECC
T ss_conf ---------76999999892