HHsearch alignment for GI: 254780872 and conserved domain: PRK00517

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed.
Probab=99.67  E-value=9.8e-16  Score=118.25  Aligned_cols=121  Identities=21%  Similarity=0.367  Sum_probs=93.9

Q ss_pred             HHHCCEEEECCCHHHHHHHHHHCCCC-EEEECCHHHHHHHHHHHHHCCCCCCC--CCCCCCCCCCCCCCCHHHHEECCCH
Q ss_conf             00162888569856999999731981-69952135677888865310112111--1221001232111530130012431
Q gi|254780872|r   65 FKGLRILDLGCGGGLLSEPMAQMGAT-VTGIDPSTKNIAIAKNHANMKNINID--YRVSCAEEIAETDEKFDIILNMEVI  141 (254)
Q Consensus        65 l~g~~VLDiGCG~G~~s~~la~~g~~-V~giD~S~~~i~~Ak~~a~~~~~~i~--~~~~~~~~l~~~~~~FD~V~~~~vl  141 (254)
T Consensus       161 ~~~~~vLDvG~GSGILaIaA~klGa~~v~a~DiD~~Av~~a~eN~~lN~v~~~~~~~~~~---~~~~~~~~DlvvAN-Il  236 (298)
T PRK00517        161 LPGKTVLDVGCGSGILAIAAAKLGAKPVLAIDIDPQAVEAARENAELNGVDDRLELYLPE---DQPLEGKADVIVAN-IL  236 (298)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCC---CCCCCCCCCEEEEE-CC
T ss_conf             468868871577069999999749984999989899999999999986998426896166---43446764689973-15


Q ss_pred             HCCCCH-HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHCCCEEEEE
Q ss_conf             026888-8998888752133321577436766024564156554310467899857122538899999999869838885
Q gi|254780872|r  142 EHVDNI-PYFIKTCCSLLLSNGLMFISTINRNLKAMLLAIIGAEYLLQWLPKGTHQYDKFIKPTEMECFLAANKVKIIDR  220 (254)
Q Consensus       142 eHv~d~-~~~l~~~~~~LkpgG~liist~Nr~~~s~~~~i~~ae~il~~~P~gtH~~~~Fi~p~el~~~l~~~g~~~~~~  220 (254)
T Consensus       237 ---a~vl~~l~~~~~~~l~~~G~lilSGI--------------------l~------~---~~~~v~~~~~~~g~~~~~~  284 (298)
T PRK00517        237 ---ANPLIELAPDLAALVKPGGRLILSGI--------------------LA------E---QADEVLEAYEDAGFTLDEV  284 (298)
T ss_pred             ---HHHHHHHHHHHHHHHCCCCEEEEECC--------------------CH------H---HHHHHHHHHHHCCCEEEEE
T ss_conf             ---89999999999997389979999278--------------------48------8---9999999999879989788


Q ss_pred             E
Q ss_conf             5
Q gi|254780872|r  221 V  221 (254)
Q Consensus       221 ~  221 (254)
T Consensus       285 ~  285 (298)
T PRK00517        285 A  285 (298)
T ss_pred             E
T ss_conf             6