HHsearch alignment for GI: 254780872 and conserved domain: PRK00517
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed.
Probab=99.67 E-value=9.8e-16 Score=118.25 Aligned_cols=121 Identities=21% Similarity=0.367 Sum_probs=93.9
Q ss_pred HHHCCEEEECCCHHHHHHHHHHCCCC-EEEECCHHHHHHHHHHHHHCCCCCCC--CCCCCCCCCCCCCCCHHHHEECCCH
Q ss_conf 00162888569856999999731981-69952135677888865310112111--1221001232111530130012431
Q gi|254780872|r 65 FKGLRILDLGCGGGLLSEPMAQMGAT-VTGIDPSTKNIAIAKNHANMKNINID--YRVSCAEEIAETDEKFDIILNMEVI 141 (254)
Q Consensus 65 l~g~~VLDiGCG~G~~s~~la~~g~~-V~giD~S~~~i~~Ak~~a~~~~~~i~--~~~~~~~~l~~~~~~FD~V~~~~vl 141 (254)
T Consensus 161 ~~~~~vLDvG~GSGILaIaA~klGa~~v~a~DiD~~Av~~a~eN~~lN~v~~~~~~~~~~---~~~~~~~~DlvvAN-Il 236 (298)
T PRK00517 161 LPGKTVLDVGCGSGILAIAAAKLGAKPVLAIDIDPQAVEAARENAELNGVDDRLELYLPE---DQPLEGKADVIVAN-IL 236 (298)
T ss_pred CCCCEEEEECCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCC---CCCCCCCCCEEEEE-CC
T ss_conf 468868871577069999999749984999989899999999999986998426896166---43446764689973-15
Q ss_pred HCCCCH-HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHCCCEEEEE
Q ss_conf 026888-8998888752133321577436766024564156554310467899857122538899999999869838885
Q gi|254780872|r 142 EHVDNI-PYFIKTCCSLLLSNGLMFISTINRNLKAMLLAIIGAEYLLQWLPKGTHQYDKFIKPTEMECFLAANKVKIIDR 220 (254)
Q Consensus 142 eHv~d~-~~~l~~~~~~LkpgG~liist~Nr~~~s~~~~i~~ae~il~~~P~gtH~~~~Fi~p~el~~~l~~~g~~~~~~ 220 (254)
T Consensus 237 ---a~vl~~l~~~~~~~l~~~G~lilSGI--------------------l~------~---~~~~v~~~~~~~g~~~~~~ 284 (298)
T PRK00517 237 ---ANPLIELAPDLAALVKPGGRLILSGI--------------------LA------E---QADEVLEAYEDAGFTLDEV 284 (298)
T ss_pred ---HHHHHHHHHHHHHHHCCCCEEEEECC--------------------CH------H---HHHHHHHHHHHCCCEEEEE
T ss_conf ---89999999999997389979999278--------------------48------8---9999999999879989788
Q ss_pred E
Q ss_conf 5
Q gi|254780872|r 221 V 221 (254)
Q Consensus 221 ~ 221 (254)
T Consensus 285 ~ 285 (298)
T PRK00517 285 A 285 (298)
T ss_pred E
T ss_conf 6