HHsearch alignment for GI: 254780872 and conserved domain: PRK00811
>PRK00811 spermidine synthase; Provisional.
Probab=98.46 E-value=5.8e-07 Score=63.82 Aligned_cols=98 Identities=14% Similarity=0.280 Sum_probs=72.1
Q ss_pred HHCCEEEECCCHHHHHHHHHHCC--CCEEEECCHHHHHHHHHHHHHC------CCCCCCCCCCCCCCCC-CCCCCHHHHE
Q ss_conf 01628885698569999997319--8169952135677888865310------1121111221001232-1115301300
Q gi|254780872|r 66 KGLRILDLGCGGGLLSEPMAQMG--ATVTGIDPSTKNIAIAKNHANM------KNINIDYRVSCAEEIA-ETDEKFDIIL 136 (254)
Q Consensus 66 ~g~~VLDiGCG~G~~s~~la~~g--~~V~giD~S~~~i~~Ak~~a~~------~~~~i~~~~~~~~~l~-~~~~~FD~V~ 136 (254)
T Consensus 78 ~pk~VLIiGGGDGg~~rE~lkh~~v~~v~~VeiD~~Vi~~~~~~lp~~~~~~~~dprv~~~~~Dg~~fv~~~~~~yDvII 157 (283)
T PRK00811 78 NPKKVLIIGGGDGGTLREVLKHPSVEKITMVEIDERVVEMSRKYLPEISGGAWDDPRVELVIGDGVKFVRETENSFDVII 157 (283)
T ss_pred CCCEEEEECCCCHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCEEE
T ss_conf 97748995687479999984278856799994689999999998388631330297159982789999984523554899
Q ss_pred ECCCHHCCCCH---------HHHHHHHHHHCCCCCEEEEEC
Q ss_conf 12431026888---------899888875213332157743
Q gi|254780872|r 137 NMEVIEHVDNI---------PYFIKTCCSLLLSNGLMFIST 168 (254)
Q Consensus 137 ~~~vleHv~d~---------~~~l~~~~~~LkpgG~liist 168 (254)
T Consensus 158 ~D-----~tDP~gpa~~Lft~~Fy~~~~~~L~~~Gi~v~Q~ 193 (283)
T PRK00811 158 VD-----STDPVGPAEGLFTKEFYENCKRALKEGGIFVAQS 193 (283)
T ss_pred EE-----CCCCCCHHHHHCCHHHHHHHHHHCCCCCEEEECC
T ss_conf 80-----8998864455345999999998539995899927