HHsearch alignment for GI: 254780872 and conserved domain: PRK01438
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=92.40 E-value=0.15 Score=30.18 Aligned_cols=73 Identities=18% Similarity=0.339 Sum_probs=42.3
Q ss_pred CHHHCCEEEECCC-HHH-HHHHHHHCCCCEEEECCHHHHHHHHHH-HHHCCCCCCCCCCCCCCCCCCCCCCHHHHEEC-C
Q ss_conf 8001628885698-569-999997319816995213567788886-53101121111221001232111530130012-4
Q gi|254780872|r 64 PFKGLRILDLGCG-GGL-LSEPMAQMGATVTGIDPSTKNIAIAKN-HANMKNINIDYRVSCAEEIAETDEKFDIILNM-E 139 (254)
Q Consensus 64 ~l~g~~VLDiGCG-~G~-~s~~la~~g~~V~giD~S~~~i~~Ak~-~a~~~~~~i~~~~~~~~~l~~~~~~FD~V~~~-~ 139 (254)
T Consensus 11 ~~~gk~v~V~GlG~sG~s~a~~L~~~G~~v~~~D~~~~~~~~~~~~~l~~~g--~~~~~g~~~~--~~~~~~d~vV~SPG 86 (481)
T PRK01438 11 DWSGLRVVVAGLGVSGFPAADALHELGASVTVVADGDDDRSRERAALLEVLG--ATVRLGDGET--TLPEGTELVVTSPG 86 (481)
T ss_pred HCCCCEEEEEEECHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCC--CEEEECCCHH--HHHCCCCEEEECCC
T ss_conf 7189989999575889999999996799899997998744868999888549--8899688756--66248999998997
Q ss_pred C
Q ss_conf 3
Q gi|254780872|r 140 V 140 (254)
Q Consensus 140 v 140 (254)
T Consensus 87 I 87 (481)
T PRK01438 87 W 87 (481)
T ss_pred C
T ss_conf 8