HHsearch alignment for GI: 254780872 and conserved domain: PRK01438

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=92.40  E-value=0.15  Score=30.18  Aligned_cols=73  Identities=18%  Similarity=0.339  Sum_probs=42.3

Q ss_pred             CHHHCCEEEECCC-HHH-HHHHHHHCCCCEEEECCHHHHHHHHHH-HHHCCCCCCCCCCCCCCCCCCCCCCHHHHEEC-C
Q ss_conf             8001628885698-569-999997319816995213567788886-53101121111221001232111530130012-4
Q gi|254780872|r   64 PFKGLRILDLGCG-GGL-LSEPMAQMGATVTGIDPSTKNIAIAKN-HANMKNINIDYRVSCAEEIAETDEKFDIILNM-E  139 (254)
Q Consensus        64 ~l~g~~VLDiGCG-~G~-~s~~la~~g~~V~giD~S~~~i~~Ak~-~a~~~~~~i~~~~~~~~~l~~~~~~FD~V~~~-~  139 (254)
T Consensus        11 ~~~gk~v~V~GlG~sG~s~a~~L~~~G~~v~~~D~~~~~~~~~~~~~l~~~g--~~~~~g~~~~--~~~~~~d~vV~SPG   86 (481)
T PRK01438         11 DWSGLRVVVAGLGVSGFPAADALHELGASVTVVADGDDDRSRERAALLEVLG--ATVRLGDGET--TLPEGTELVVTSPG   86 (481)
T ss_pred             HCCCCEEEEEEECHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCC--CEEEECCCHH--HHHCCCCEEEECCC
T ss_conf             7189989999575889999999996799899997998744868999888549--8899688756--66248999998997


Q ss_pred             C
Q ss_conf             3
Q gi|254780872|r  140 V  140 (254)
Q Consensus       140 v  140 (254)
T Consensus        87 I   87 (481)
T PRK01438         87 W   87 (481)
T ss_pred             C
T ss_conf             8