HHsearch alignment for GI: 254780872 and conserved domain: PRK04338

>PRK04338 N(2),N(2)-dimethylguanosine tRNA methyltransferase; Provisional.
Probab=97.16  E-value=0.0015  Score=42.66  Aligned_cols=99  Identities=17%  Similarity=0.254  Sum_probs=75.0

Q ss_pred             HHCCEEEECCCHHHHHHHHH-HCC-CCEEEECCHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCCC-CCCCHHHHEECCCH
Q ss_conf             01628885698569999997-319-8169952135677888865310112-11112210012321-11530130012431
Q gi|254780872|r   66 KGLRILDLGCGGGLLSEPMA-QMG-ATVTGIDPSTKNIAIAKNHANMKNI-NIDYRVSCAEEIAE-TDEKFDIILNMEVI  141 (254)
Q Consensus        66 ~g~~VLDiGCG~G~~s~~la-~~g-~~V~giD~S~~~i~~Ak~~a~~~~~-~i~~~~~~~~~l~~-~~~~FD~V~~~~vl  141 (254)
T Consensus        51 ~~~~ilDalsasGiR~iRy~~E~~~~~v~~NDi~~~a~~~i~~N~~~N~~~~~~v~~~dAn~lm~~~~~~fD~IDlD---  127 (376)
T PRK04338         51 RRKSVLDALSASGIRGIRYALETGVEKVILNDINPDAVELIKKNLELNGLENAEVFNEDANVLLHENERKFDVVDID---  127 (376)
T ss_pred             CCCEEEECCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCEEEEC---
T ss_conf             69768740676549999998727998799956999999999999998299826981324899998378758778678---


Q ss_pred             HCCCCHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf             026888899888875213332157743
Q gi|254780872|r  142 EHVDNIPYFIKTCCSLLLSNGLMFIST  168 (254)
Q Consensus       142 eHv~d~~~~l~~~~~~LkpgG~liist  168 (254)
T Consensus       128 -PfGSp~pflDsAi~~v~~~GlL~vTa  153 (376)
T PRK04338        128 -PFGSPAPFLDSAIRALRRGGLLCVTA  153 (376)
T ss_pred             -CCCCCCHHHHHHHHHHHCCCEEEEEE
T ss_conf             -99992087999999840398899994