HHsearch alignment for GI: 254780872 and conserved domain: PRK04338
>PRK04338 N(2),N(2)-dimethylguanosine tRNA methyltransferase; Provisional.
Probab=97.16 E-value=0.0015 Score=42.66 Aligned_cols=99 Identities=17% Similarity=0.254 Sum_probs=75.0
Q ss_pred HHCCEEEECCCHHHHHHHHH-HCC-CCEEEECCHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCCC-CCCCHHHHEECCCH
Q ss_conf 01628885698569999997-319-8169952135677888865310112-11112210012321-11530130012431
Q gi|254780872|r 66 KGLRILDLGCGGGLLSEPMA-QMG-ATVTGIDPSTKNIAIAKNHANMKNI-NIDYRVSCAEEIAE-TDEKFDIILNMEVI 141 (254)
Q Consensus 66 ~g~~VLDiGCG~G~~s~~la-~~g-~~V~giD~S~~~i~~Ak~~a~~~~~-~i~~~~~~~~~l~~-~~~~FD~V~~~~vl 141 (254)
T Consensus 51 ~~~~ilDalsasGiR~iRy~~E~~~~~v~~NDi~~~a~~~i~~N~~~N~~~~~~v~~~dAn~lm~~~~~~fD~IDlD--- 127 (376)
T PRK04338 51 RRKSVLDALSASGIRGIRYALETGVEKVILNDINPDAVELIKKNLELNGLENAEVFNEDANVLLHENERKFDVVDID--- 127 (376)
T ss_pred CCCEEEECCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCEEEEC---
T ss_conf 69768740676549999998727998799956999999999999998299826981324899998378758778678---
Q ss_pred HCCCCHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 026888899888875213332157743
Q gi|254780872|r 142 EHVDNIPYFIKTCCSLLLSNGLMFIST 168 (254)
Q Consensus 142 eHv~d~~~~l~~~~~~LkpgG~liist 168 (254)
T Consensus 128 -PfGSp~pflDsAi~~v~~~GlL~vTa 153 (376)
T PRK04338 128 -PFGSPAPFLDSAIRALRRGGLLCVTA 153 (376)
T ss_pred -CCCCCCHHHHHHHHHHHCCCEEEEEE
T ss_conf -99992087999999840398899994