HHsearch alignment for GI: 254780872 and conserved domain: PRK05031
>PRK05031 tRNA (uracil-5-)-methyltransferase; Validated.
Probab=98.64 E-value=7.8e-08 Score=69.25 Aligned_cols=59 Identities=25% Similarity=0.305 Sum_probs=52.7
Q ss_pred HCCEEEECCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCC-CCCCCCCCCCCC
Q ss_conf 16288856985699999973198169952135677888865310112-111122100123
Q gi|254780872|r 67 GLRILDLGCGGGLLSEPMAQMGATVTGIDPSTKNIAIAKNHANMKNI-NIDYRVSCAEEI 125 (254)
Q Consensus 67 g~~VLDiGCG~G~~s~~la~~g~~V~giD~S~~~i~~Ak~~a~~~~~-~i~~~~~~~~~l 125 (254)
T Consensus 208 ~~~vlDLYcG~Gtfsl~LA~~~~~V~gVE~~~~aV~~A~~NA~~N~i~N~~fi~~~a~~~ 267 (363)
T PRK05031 208 KGDLLELYCGNGNFTLALARNFRRVLATEISKPSVAAAQYNIAANGIDNVQIIRMSAEEF 267 (363)
T ss_pred CCCEEEEECCCCHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCHHHH
T ss_conf 982898605866426998862687999953899999999999986998649996589999