HHsearch alignment for GI: 254780872 and conserved domain: PRK05134
>PRK05134 3-demethylubiquinone-9 3-methyltransferase; Provisional.
Probab=100.00 E-value=0 Score=540.62 Aligned_cols=232 Identities=49% Similarity=0.917 Sum_probs=223.8
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEECCCHHHHHHHHHHC
Q ss_conf 67898899999999988746888871267751756599999998865187644458800162888569856999999731
Q gi|254780872|r 8 YTTKNQDAINQFSNIASEWWEPTGKFKPLHQINPVRIKYIQDKIMQHFQCKSDDTHPFKGLRILDLGCGGGLLSEPMAQM 87 (254)
Q Consensus 8 ~~t~~~~ei~~F~~~a~~WwD~~g~~~~Lh~~N~~R~~~I~~~i~~~~~~~~~~~~~l~g~~VLDiGCG~G~~s~~la~~ 87 (254)
T Consensus 1 ~stvd~~Ei~~F~~la~~WWd~~g~~~~Lh~~N~~R~~~i~~~~~-----------~l~G~~ILDVGCGgG~lse~LAr~ 69 (233)
T PRK05134 1 MSNVDPAEIAKFSALAARWWDPNGEFKPLHRINPLRLNYIREHAG-----------GLFGKRVLDVGCGGGILSESMARL 69 (233)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC-----------CCCCCEEEEECCCCCHHHHHHHHC
T ss_conf 997999999999988998479999960788836999999997514-----------668998999755897112899967
Q ss_pred CCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC-CCCCCHHHHEECCCHHCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf 981699521356778888653101121111221001232-1115301300124310268888998888752133321577
Q gi|254780872|r 88 GATVTGIDPSTKNIAIAKNHANMKNINIDYRVSCAEEIA-ETDEKFDIILNMEVIEHVDNIPYFIKTCCSLLLSNGLMFI 166 (254)
Q Consensus 88 g~~V~giD~S~~~i~~Ak~~a~~~~~~i~~~~~~~~~l~-~~~~~FD~V~~~~vleHv~d~~~~l~~~~~~LkpgG~lii 166 (254)
T Consensus 70 Ga~VtGID~S~~~I~~Ar~ha~~~~l~i~y~~~~~e~l~~~~~~~FDvV~~~EVlEHV~d~~~~l~~~~rlLKPGG~l~l 149 (233)
T PRK05134 70 GATVTGIDASEENIEVARLHALESGLKIDYRQITAEELAAEHPGQFDVVTCMEMLEHVPDPASFIRACAKLVKPGGLVFF 149 (233)
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCCEEEEEEEHHHHHCCCHHHHHHHHHHHHCCCCEEEE
T ss_conf 99799987998999999998564434511675147665430578634774421477538999999999997389914999
Q ss_pred ECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEECCCCCCEEEEEE
Q ss_conf 43676602456415655431046789985712253889999999986983888550576677775786478864517999
Q gi|254780872|r 167 STINRNLKAMLLAIIGAEYLLQWLPKGTHQYDKFIKPTEMECFLAANKVKIIDRVGVVYNVFCNKWQLSAKNMDVNYMVL 246 (254)
Q Consensus 167 st~Nr~~~s~~~~i~~ae~il~~~P~gtH~~~~Fi~p~el~~~l~~~g~~~~~~~g~~~~p~~~~w~~~~~~~~vnY~~~ 246 (254)
T Consensus 150 sTiNrt~~S~l~~i~~AEyil~~vP~gTH~w~kFi~P~el~~~l~~~~~~~~~~~G~~ynp~~~~w~~~-~~~~vNY~~~ 228 (233)
T PRK05134 150 STLNRNLKSYLLAIVGAEYILRMLPKGTHDYKKFIKPSELAAWLRQAGLEVQDIKGLTYNPLTNRWKLS-DDVDVNYMLA 228 (233)
T ss_pred ECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHCCCEEEEEEEEEEECCCCEEEEC-CCCCCCEEEE
T ss_conf 726789899999999998886049999858666799999999999879957210007996567938988-9998145899
Q ss_pred EECCC
Q ss_conf 97587
Q gi|254780872|r 247 GHLPK 251 (254)
Q Consensus 247 ~~kp~ 251 (254)
T Consensus 229 ~~K~~ 233 (233)
T PRK05134 229 ARKPA 233 (233)
T ss_pred EECCC
T ss_conf 87189