HHsearch alignment for GI: 254780872 and conserved domain: PRK08317
>PRK08317 hypothetical protein; Provisional.
Probab=99.94 E-value=1.1e-26 Score=186.12 Aligned_cols=153 Identities=20% Similarity=0.296 Sum_probs=118.4
Q ss_pred HHCCEEEECCCHHHHHHHHHHC---CCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHEECCCHH
Q ss_conf 0162888569856999999731---9816995213567788886531011211112210012321115301300124310
Q gi|254780872|r 66 KGLRILDLGCGGGLLSEPMAQM---GATVTGIDPSTKNIAIAKNHANMKNINIDYRVSCAEEIAETDEKFDIILNMEVIE 142 (254)
Q Consensus 66 ~g~~VLDiGCG~G~~s~~la~~---g~~V~giD~S~~~i~~Ak~~a~~~~~~i~~~~~~~~~l~~~~~~FD~V~~~~vle 142 (254)
T Consensus 19 pG~~vLDiGcG~G~~~~~la~~~g~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~lp~~d~sfD~v~~~~~l~ 98 (241)
T PRK08317 19 PGERVLDVGCGPGNDLRELADRVGPEGRVVGIDRSEAMLALARERAAGLLSNVEFVRGDADGLPFPDESFDAVRSDRVLQ 98 (241)
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCEEEHHHHHH
T ss_conf 97999996641749999999974999789999698899999999986228964999554643589888704562211576
Q ss_pred CCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH---HHHHHCC-CCCCCCCCHHHCCCHHHHHHHHHHCCCEEE
Q ss_conf 268888998888752133321577436766024564156---5543104-678998571225388999999998698388
Q gi|254780872|r 143 HVDNIPYFIKTCCSLLLSNGLMFISTINRNLKAMLLAII---GAEYLLQ-WLPKGTHQYDKFIKPTEMECFLAANKVKII 218 (254)
Q Consensus 143 Hv~d~~~~l~~~~~~LkpgG~liist~Nr~~~s~~~~i~---~ae~il~-~~P~gtH~~~~Fi~p~el~~~l~~~g~~~~ 218 (254)
T Consensus 99 h~~d~~~~l~e~~RvLkPGG~~vi~d~D--w~~~~~~~~~~~~~~~i~~~~~~~~~~---~~-~gr~L~~~l~~aG~~~v 172 (241)
T PRK08317 99 HLEDPRRALAEMARVLRPGGRAVVLDTD--WDTLVIHSGDRALMRKILNFWSDHFAN---PW-LGRRLPGLFREAGLTDI 172 (241)
T ss_pred HCCCHHHHHHHHHHHCCCCCEEEEEECC--CCCCCCCCCCHHHHHHHHHHHHHHCCC---CH-HHHHHHHHHHHCCCCEE
T ss_conf 2258999999999981888389999667--886742898889999999999974789---20-78999999998699056
Q ss_pred EEEEEE
Q ss_conf 855057
Q gi|254780872|r 219 DRVGVV 224 (254)
Q Consensus 219 ~~~g~~ 224 (254)
T Consensus 173 ~~~~~~ 178 (241)
T PRK08317 173 EVEPYT 178 (241)
T ss_pred EEEEEE
T ss_conf 888877