HHsearch alignment for GI: 254780872 and conserved domain: PRK10611
>PRK10611 chemotaxis methyltransferase CheR; Provisional.
Probab=98.79 E-value=1.8e-08 Score=73.19 Aligned_cols=101 Identities=20% Similarity=0.251 Sum_probs=69.3
Q ss_pred HCCEEEECCCHHH--HHHH--HHH----C--CCCEEEECCHHHHHHHHHHHHH----CCCC-------------------
Q ss_conf 1628885698569--9999--973----1--9816995213567788886531----0112-------------------
Q gi|254780872|r 67 GLRILDLGCGGGL--LSEP--MAQ----M--GATVTGIDPSTKNIAIAKNHAN----MKNI------------------- 113 (254)
Q Consensus 67 g~~VLDiGCG~G~--~s~~--la~----~--g~~V~giD~S~~~i~~Ak~~a~----~~~~------------------- 113 (254)
T Consensus 116 ~lRIWSAgCSTGEEpYSiAm~l~E~~~~~~~~~~I~aTDIs~~~L~~Ar~GiY~~~~~~~~p~~~~~ryF~~~~~~~~g~ 195 (287)
T PRK10611 116 EYRVWSAAASTGEEPYSIAMTLADTLGTAPGRWKVFASDIDTEVLEKARSGIYRLEELKTLSPQQLQRYFMRGTGPHEGL 195 (287)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCCCHHHHHCCCHHHHHHHEECCCCCCCCE
T ss_conf 75899767788723999999999973237777079999798889999980898889984599999951164157876661
Q ss_pred ---------CCCCCCCCCCCCCC-CCCCHHHHEECCCHHCCCCH--HHHHHHHHHHCCCCCEEEEE
Q ss_conf ---------11112210012321-11530130012431026888--89988887521333215774
Q gi|254780872|r 114 ---------NIDYRVSCAEEIAE-TDEKFDIILNMEVIEHVDNI--PYFIKTCCSLLLSNGLMFIS 167 (254)
Q Consensus 114 ---------~i~~~~~~~~~l~~-~~~~FD~V~~~~vleHv~d~--~~~l~~~~~~LkpgG~liis 167 (254)
T Consensus 196 ~~v~~~lr~~V~F~~~NL~~~~~~~~~~fDlIfCRNVlIYFd~~~q~~vl~~~~~~L~pgG~L~lG 261 (287)
T PRK10611 196 VRVRQELANYVDFQSLNLLAKQYTVPGPFDAIFCRNVMIYFDKTTQQEILRRFVPLLKPDGLLFAG 261 (287)
T ss_pred EEECHHHHCCCEEEHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 874578763077714006799888889951999784053678999999999999986899289983