HHsearch alignment for GI: 254780872 and conserved domain: PRK11730
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed.
Probab=95.27 E-value=0.26 Score=28.75 Aligned_cols=99 Identities=18% Similarity=0.129 Sum_probs=58.6
Q ss_pred HHCCEEEECCCH--HHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCC------CCCCCC-----CC---CCCCCCCC
Q ss_conf 016288856985--699999973198169952135677888865310112------111122-----10---01232111
Q gi|254780872|r 66 KGLRILDLGCGG--GLLSEPMAQMGATVTGIDPSTKNIAIAKNHANMKNI------NIDYRV-----SC---AEEIAETD 129 (254)
Q Consensus 66 ~g~~VLDiGCG~--G~~s~~la~~g~~V~giD~S~~~i~~Ak~~a~~~~~------~i~~~~-----~~---~~~l~~~~ 129 (254)
T Consensus 312 ~i~~v~ViGaG~MG~GIA~~~a~aG~~V~l~D~~~e~l~~g~~~~~~~~~~~v~~g~~~~~~~~~~l~ri~~~~~~~-~l 390 (715)
T PRK11730 312 DVKQAAVLGAGIMGGGIAYQSASKGVPVIMKDINQKALDLGMNEAAKLLNKQVERGRIDGLKMAGVLSTITPTLDYA-GF 390 (715)
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCH-HH
T ss_conf 76279997877107999999995799579997899999999999999999998648998799999995687415402-43
Q ss_pred CCHHHHEECCCHHCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf 5301300124310268888998888752133321577
Q gi|254780872|r 130 EKFDIILNMEVIEHVDNIPYFIKTCCSLLLSNGLMFI 166 (254)
Q Consensus 130 ~~FD~V~~~~vleHv~d~~~~l~~~~~~LkpgG~lii 166 (254)
T Consensus 391 ~~~DlVIE-AV~E~l~~K~~vf~~l~~~~~~~aIlAs 426 (715)
T PRK11730 391 KDVDVVVE-AVVENPKVKAAVLAEVEQKVREDTILAS 426 (715)
T ss_pred CCCCEEEE-ECCCCHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 35888998-5436588999999999865587538851