HHsearch alignment for GI: 254780872 and conserved domain: PRK11760
>PRK11760 putative RNA 2'-O-ribose methyltransferase; Provisional.
Probab=96.58 E-value=0.0083 Score=38.06 Aligned_cols=111 Identities=16% Similarity=0.202 Sum_probs=71.3
Q ss_pred HHHHHH-HHHHHHHHCCCCCCCCCCHHHCCEEEECCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 565999-9999886518764445880016288856985699999973198169952135677888865310112111122
Q gi|254780872|r 41 PVRIKY-IQDKIMQHFQCKSDDTHPFKGLRILDLGCGGGLLSEPMAQMGATVTGIDPSTKNIAIAKNHANMKNINIDYRV 119 (254)
Q Consensus 41 ~~R~~~-I~~~i~~~~~~~~~~~~~l~g~~VLDiGCG~G~~s~~la~~g~~V~giD~S~~~i~~Ak~~a~~~~~~i~~~~ 119 (254)
T Consensus 184 PSRStLKLEEA~~~Fip~~e~~~rl~~Gm~aVDLGAaPGGWT~qLv~rg~~V~AVDnG~m~~~L------~~~~~V~H~~ 257 (356)
T PRK11760 184 PSRSTLKLEEAFHVFIPREEWDERLASGMRAVDLGACPGGWTYQLVRRGMFVTAVDNGPMAESL------MDTGQVEHLR 257 (356)
T ss_pred CCHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCHHH------HCCCCEEEEE
T ss_conf 8468887999999867986765321699758755869970589999779889986587678757------5288757881
Q ss_pred CCCCCCCCCCCCHHHHEECCCHHCCCCHHHHHHHHHHHCCCC
Q ss_conf 100123211153013001243102688889988887521333
Q gi|254780872|r 120 SCAEEIAETDEKFDIILNMEVIEHVDNIPYFIKTCCSLLLSN 161 (254)
Q Consensus 120 ~~~~~l~~~~~~FD~V~~~~vleHv~d~~~~l~~~~~~Lkpg 161 (254)
T Consensus 258 ~dgf~f~P~~~~vdwlVCDm----vekP~rva~lm~~Wl~~g 295 (356)
T PRK11760 258 ADGFKFRPTRKNVDWLVCDM----VEKPARVAELMAQWLVNG 295 (356)
T ss_pred CCCEEECCCCCCEEEEEEEC----CCCHHHHHHHHHHHHHCC
T ss_conf 46705636998520899705----368899999999987556