HHsearch alignment for GI: 254780872 and conserved domain: PTZ00146

>PTZ00146 fibrillarin; Provisional.
Probab=97.83  E-value=0.00049  Score=45.67  Aligned_cols=135  Identities=18%  Similarity=0.193  Sum_probs=78.3

Q ss_pred             HHCCEEEECCCHHHHHHHHHHC-C--CCEEEECCHHHH----HHHHHHHHHCCCCCCCCCCCCCCCC---CCCCCCHHHH
Q ss_conf             0162888569856999999731-9--816995213567----7888865310112111122100123---2111530130
Q gi|254780872|r   66 KGLRILDLGCGGGLLSEPMAQM-G--ATVTGIDPSTKN----IAIAKNHANMKNINIDYRVSCAEEI---AETDEKFDII  135 (254)
Q Consensus        66 ~g~~VLDiGCG~G~~s~~la~~-g--~~V~giD~S~~~----i~~Ak~~a~~~~~~i~~~~~~~~~l---~~~~~~FD~V  135 (254)
T Consensus       135 ~GskVLYLGAasGTTVSHVSDIVG~~G~VYAVEfSpr~~RdLl~lA~~-----R~NIvPIleDAr~P~kYr~lV~~VDvI  209 (296)
T PTZ00146        135 PGSKVLYLGAASGTTVSHVSDLVGPEGVVYAVEFSHRSGRDLVEMAKR-----RTNIVPIIEDARYPQKYRMLVPMVDCI  209 (296)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHC-----CCCCEEEECCCCCHHHHHHHCCCCCEE
T ss_conf             999899851467986556665017886199997064668899999722-----798335777789746755424555589


Q ss_pred             EECCCHHCCCCH-HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHCC
Q ss_conf             012431026888-8998888752133321577436766024564156554310467899857122538899999999869
Q gi|254780872|r  136 LNMEVIEHVDNI-PYFIKTCCSLLLSNGLMFISTINRNLKAMLLAIIGAEYLLQWLPKGTHQYDKFIKPTEMECFLAANK  214 (254)
Q Consensus       136 ~~~~vleHv~d~-~~~l~~~~~~LkpgG~liist~Nr~~~s~~~~i~~ae~il~~~P~gtH~~~~Fi~p~el~~~l~~~g  214 (254)
T Consensus       210 f~-DVAQ--pdQarI~~~Na~~FLK~gG~~~i~IKArsIDst-------------~~p~----~VF---~~Ev~kL~~~~  266 (296)
T PTZ00146        210 FA-DVAQ--PDQARIVALNAQHFLKNGGHFVISIKANCIDST-------------ADPE----VVF---ASEVQKLKKEG  266 (296)
T ss_pred             EE-CCCC--HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC-------------CCHH----HHH---HHHHHHHHHCC
T ss_conf             96-1787--658999999999853169889999972663256-------------7989----999---99999998728


Q ss_pred             CEEEEEEEEEECCCCC
Q ss_conf             8388855057667777
Q gi|254780872|r  215 VKIIDRVGVVYNVFCN  230 (254)
Q Consensus       215 ~~~~~~~g~~~~p~~~  230 (254)
T Consensus       267 f~~~e~v--~LePy~r  280 (296)
T PTZ00146        267 LKPKEQL--TLEPFER  280 (296)
T ss_pred             CCEEEEE--ECCCCCC
T ss_conf             9636887--0477778