HHsearch alignment for GI: 254780872 and conserved domain: TIGR00406
>TIGR00406 prmA ribosomal protein L11 methyltransferase; InterPro: IPR004498 Ribosomal protein L11 methyltransferase (2.1.1 from EC) is required for the methylation of ribosomal protein L11. It forms a bifunctional operon in Escherichia coli with panF (pantothenate transport).; GO: 0008276 protein methyltransferase activity, 0006479 protein amino acid methylation.
Probab=99.61 E-value=1.5e-15 Score=117.11 Aligned_cols=124 Identities=22% Similarity=0.376 Sum_probs=96.1
Q ss_pred HHH--CCEEEECCCHHHHHHHHHHCCC-CEEEECCHHHHHHHHHHHHHCCCCCCC---CCC-CCCCCCCCCCCCHHHHEE
Q ss_conf 001--6288856985699999973198-169952135677888865310112111---122-100123211153013001
Q gi|254780872|r 65 FKG--LRILDLGCGGGLLSEPMAQMGA-TVTGIDPSTKNIAIAKNHANMKNINID---YRV-SCAEEIAETDEKFDIILN 137 (254)
Q Consensus 65 l~g--~~VLDiGCG~G~~s~~la~~g~-~V~giD~S~~~i~~Ak~~a~~~~~~i~---~~~-~~~~~l~~~~~~FD~V~~ 137 (254)
T Consensus 193 ~k~kh~~viD~GCGSGIL~IAa~~LGa~~~~g~D~DP~Ave~~r~N~~lN~v~~~~~~~~~~~vPe~~~~~e~~~DViVA 272 (330)
T TIGR00406 193 LKDKHKKVIDVGCGSGILSIAALKLGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLENSVPELEQPIEGKADVIVA 272 (330)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEE
T ss_conf 77766547871267178999999751231122137728999999768745886457643205787534532256675788
Q ss_pred CCCHHCCCCH-HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHCCCE
Q ss_conf 2431026888-899888875213332157743676602456415655431046789985712253889999999986983
Q gi|254780872|r 138 MEVIEHVDNI-PYFIKTCCSLLLSNGLMFISTINRNLKAMLLAIIGAEYLLQWLPKGTHQYDKFIKPTEMECFLAANKVK 216 (254)
Q Consensus 138 ~~vleHv~d~-~~~l~~~~~~LkpgG~liist~Nr~~~s~~~~i~~ae~il~~~P~gtH~~~~Fi~p~el~~~l~~~g~~ 216 (254)
T Consensus 273 N-i---LA~vi~~L~p~~~~L~~~~G~lilSGI--------------------l~--~-------~~~sV~~ay~q~GF~ 319 (330)
T TIGR00406 273 N-I---LAEVIKELYPQFSRLVKPGGHLILSGI--------------------LE--T-------QAQSVCEAYEQAGFT 319 (330)
T ss_pred C-C---HHHHHHHHHHHHHHHCCCCCCEEEHHH--------------------HH--H-------HHHHHHHHHHCCCCE
T ss_conf 0-0---245787641355131068996574134--------------------76--4-------799999998557946
Q ss_pred EEEEE
Q ss_conf 88855
Q gi|254780872|r 217 IIDRV 221 (254)
Q Consensus 217 ~~~~~ 221 (254)
T Consensus 320 ~~~~~ 324 (330)
T TIGR00406 320 VVEIL 324 (330)
T ss_pred EHHHH
T ss_conf 34346