HHsearch alignment for GI: 254780872 and conserved domain: TIGR00536
>TIGR00536 hemK_fam methyltransferase, HemK family; InterPro: IPR004556 The gene hemK from Escherichia coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase . Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity . Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. Both Escherichia coli and Haemophilus influenzae have two members rather than one. The members from the Mycoplasmas have an additional C-terminal domain.; GO: 0008276 protein methyltransferase activity, 0006479 protein amino acid methylation.
Probab=94.92 E-value=0.02 Score=35.68 Aligned_cols=70 Identities=29% Similarity=0.443 Sum_probs=49.9
Q ss_pred CCEEEECCCHHHHHHHHHH--C--CCCEEEECCHHHHHHHHHHHHHCCCCC--CCCCCCCCCC-CCCCCC-CHHHHEE
Q ss_conf 6288856985699999973--1--981699521356778888653101121--1112210012-321115-3013001
Q gi|254780872|r 68 LRILDLGCGGGLLSEPMAQ--M--GATVTGIDPSTKNIAIAKNHANMKNIN--IDYRVSCAEE-IAETDE-KFDIILN 137 (254)
Q Consensus 68 ~~VLDiGCG~G~~s~~la~--~--g~~V~giD~S~~~i~~Ak~~a~~~~~~--i~~~~~~~~~-l~~~~~-~FD~V~~ 137 (254)
T Consensus 128 ~~~~d~~~g~g~~~~~~~~~~~pc~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 205 (311)
T TIGR00536 128 LHILDLGTGSGCIALALAYEFPPCNAEVIAVDLSPDALALAEENAEKLGLEGRVELLQSDLLEPLPGLGGPKLDLLVS 205 (311)
T ss_pred CHHHHCCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCEEEEEC
T ss_conf 011101456315666554304666622664112236788888767764320120010112444332036652236645