HHsearch alignment for GI: 254780872 and conserved domain: TIGR03451
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=97.30 E-value=0.00098 Score=43.81 Aligned_cols=95 Identities=17% Similarity=0.205 Sum_probs=60.4
Q ss_pred HHHCCEEEECCC-HHHHHHHHHH-CCC-CEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCC-CCC--CCCCHHHHEEC
Q ss_conf 001628885698-5699999973-198-16995213567788886531011211112210012-321--11530130012
Q gi|254780872|r 65 FKGLRILDLGCG-GGLLSEPMAQ-MGA-TVTGIDPSTKNIAIAKNHANMKNINIDYRVSCAEE-IAE--TDEKFDIILNM 138 (254)
Q Consensus 65 l~g~~VLDiGCG-~G~~s~~la~-~g~-~V~giD~S~~~i~~Ak~~a~~~~~~i~~~~~~~~~-l~~--~~~~FD~V~~~ 138 (254)
T Consensus 175 ~~g~~VlV~GaG~iGl~a~~~ak~~Ga~~Vi~~d~~~~rl~~A~~lGa~~--~i~~~~~~~~~~v~~~t~g~G~Dvvie- 251 (358)
T TIGR03451 175 KRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATH--TVNSSGTDPVEAIRALTGGFGADVVID- 251 (358)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCEE--EECCCCCCHHHHHHHHHCCCCCCEEEE-
T ss_conf 99988999673769999999999839918999919889999999659909--973998788999999858988749999-
Q ss_pred CCHHCCCCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 43102688889988887521333215774
Q gi|254780872|r 139 EVIEHVDNIPYFIKTCCSLLLSNGLMFIS 167 (254)
Q Consensus 139 ~vleHv~d~~~~l~~~~~~LkpgG~liis 167 (254)
T Consensus 252 ----~~G~~-~~~~~al~~~~~gG~iv~~ 275 (358)
T TIGR03451 252 ----AVGRP-ETYKQAFYARDLAGTVVLV 275 (358)
T ss_pred ----CCCCH-HHHHHHHHHHCCCCEEEEE
T ss_conf ----99998-9999999976279699999