HHsearch alignment for GI: 254780872 and conserved domain: pfam01739

>pfam01739 CheR CheR methyltransferase, SAM binding domain. CheR proteins are part of the chemotaxis signaling mechanism in bacteria. CheR methylates the chemotaxis receptor at specific glutamate residues. CheR is an S-adenosylmethionine- dependent methyltransferase - the C-terminal domain (this one) binds SAM.
Probab=98.92  E-value=7.6e-09  Score=75.51  Aligned_cols=100  Identities=18%  Similarity=0.283  Sum_probs=69.5

Q ss_pred             HCCEEEECCCHHH----HHHHHHHC-------CCCEEEECCHHHHHHHHHHHHHC----CCC------------------
Q ss_conf             1628885698569----99999731-------98169952135677888865310----112------------------
Q gi|254780872|r   67 GLRILDLGCGGGL----LSEPMAQM-------GATVTGIDPSTKNIAIAKNHANM----KNI------------------  113 (254)
Q Consensus        67 g~~VLDiGCG~G~----~s~~la~~-------g~~V~giD~S~~~i~~Ak~~a~~----~~~------------------  113 (254)
T Consensus        31 ~lrIWsagCStGEE~YSlAi~l~e~~~~~~~~~~~I~atDI~~~~l~~Ar~G~Y~~~~~~~~p~~~~~ryF~~~~~~~~~  110 (194)
T pfam01739        31 RVRIWSAGCSSGEEPYSLAMLLAETLPNALPWDFKILATDIDLSALEKARAGVYPERELEGLPPELLRRYFTKGAGGGYR  110 (194)
T ss_pred             CEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCHHHHHCCCHHHHHHHCCCCCCCCEE
T ss_conf             55999736889951899999999974325787449999739889999998789889998459999999628607899487


Q ss_pred             -------CCCCCCCCCCCCCCCCCCHHHHEECCCHHCCCC--HHHHHHHHHHHCCCCCEEEEE
Q ss_conf             -------111122100123211153013001243102688--889988887521333215774
Q gi|254780872|r  114 -------NIDYRVSCAEEIAETDEKFDIILNMEVIEHVDN--IPYFIKTCCSLLLSNGLMFIS  167 (254)
Q Consensus       114 -------~i~~~~~~~~~l~~~~~~FD~V~~~~vleHv~d--~~~~l~~~~~~LkpgG~liis  167 (254)
T Consensus       111 i~~~lr~~V~F~~~NL~~~~-~~~~~DlIfCRNVlIYF~~~~~~~vl~~l~~~L~~gG~L~lG  172 (194)
T pfam01739       111 VKPEIKEMVLFEYHNLLDYP-PLGDFDVIFCRNVLIYFDEETQRKILNRFASALKPGGYLFLG  172 (194)
T ss_pred             ECHHHHCCCEEEECCCCCCC-CCCCEEEEEECCEEEECCHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             68899711668546655688-767503999802101379999999999999984899499980