HHsearch alignment for GI: 254780872 and conserved domain: pfam02005
>pfam02005 TRM N2,N2-dimethylguanosine tRNA methyltransferase. This enzyme EC:2.1.1.32 used S-AdoMet to methylate tRNA. The TRM1 gene of Saccharomyces cerevisiae is necessary for the N2,N2-dimethylguanosine modification of both mitochondrial and cytoplasmic tRNAs. The enzyme is found in both eukaryotes and archaebacteria
Probab=96.45 E-value=0.013 Score=36.81 Aligned_cols=99 Identities=18% Similarity=0.296 Sum_probs=71.6
Q ss_pred HHCCEEEECCCHHHHHHHHHHC--C-CCEEEECCHHHHHHHHHHHHHCCCCC--CCCCCCCCCCCCC-CCCCHHHHEECC
Q ss_conf 0162888569856999999731--9-81699521356778888653101121--1112210012321-115301300124
Q gi|254780872|r 66 KGLRILDLGCGGGLLSEPMAQM--G-ATVTGIDPSTKNIAIAKNHANMKNIN--IDYRVSCAEEIAE-TDEKFDIILNME 139 (254)
Q Consensus 66 ~g~~VLDiGCG~G~~s~~la~~--g-~~V~giD~S~~~i~~Ak~~a~~~~~~--i~~~~~~~~~l~~-~~~~FD~V~~~~ 139 (254)
T Consensus 49 ~~~~iLDalsasGiR~iRya~E~~~~~~V~~NDi~~~a~~~i~~N~~lN~~~~~~~~~~~DAn~lm~~~~~~fD~IDlD- 127 (375)
T pfam02005 49 RGIIVLDALSASGIRAIRFALEVPGVEEVFANDISPKAVELIKENVKLNEVENIVVINGDDANMLMRENHRRFDVIDLD- 127 (375)
T ss_pred CCCEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCEEEEC-
T ss_conf 8866975467541999999974699866999559989999999988865998737875475999998558867568678-
Q ss_pred CHHCCCCHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 31026888899888875213332157743
Q gi|254780872|r 140 VIEHVDNIPYFIKTCCSLLLSNGLMFIST 168 (254)
Q Consensus 140 vleHv~d~~~~l~~~~~~LkpgG~liist 168 (254)
T Consensus 128 ---PfGSp~pfldsAi~av~~~GlL~vTa 153 (375)
T pfam02005 128 ---PFGSPAPFLDSAVQSVKRGGLLCVTA 153 (375)
T ss_pred ---CCCCCCHHHHHHHHHHCCCCEEEEEE
T ss_conf ---99992177999999831598899994