HHsearch alignment for GI: 254780872 and conserved domain: pfam03059

>pfam03059 NAS Nicotianamine synthase protein. Nicotianamine synthase EC:2.5.1.43 catalyses the trimerisation of S-adenosylmethionine to yield one molecule of nicotianamine. Nicotianamine has an important role in plant iron uptake mechanisms. Plants adopt two strategies (termed I and II) of iron acquisition. Strategy I is adopted by all higher plants except graminaceous plants, which adopt strategy II. In strategy I plants, the role of nicotianamine is not fully determined: possible roles include the formation of more stable complexes with ferrous than with ferric ion, which might serve as a sensor of the physiological status of iron within a plant, or which might be involved in the transport of iron. In strategy II (graminaceous) plants, nicotianamine is the key intermediate (and nicotianamine synthase the key enzyme) in the synthesis of the mugineic family (the only known family in plants) of phytosiderophores. Phytosiderophores are iron chelators whose secretion by the roots is great
Probab=97.72  E-value=0.00085  Score=44.21  Aligned_cols=145  Identities=14%  Similarity=0.221  Sum_probs=96.0

Q ss_pred             CCEEEECCCH-HHHHHHHHHC-CC--CEEEECCHHHHHHHHHHHHHCCC---CCCCCCCCCCCCCCCCCCCHHHHEECCC
Q ss_conf             6288856985-6999999731-98--16995213567788886531011---2111122100123211153013001243
Q gi|254780872|r   68 LRILDLGCGG-GLLSEPMAQM-GA--TVTGIDPSTKNIAIAKNHANMKN---INIDYRVSCAEEIAETDEKFDIILNMEV  140 (254)
Q Consensus        68 ~~VLDiGCG~-G~~s~~la~~-g~--~V~giD~S~~~i~~Ak~~a~~~~---~~i~~~~~~~~~l~~~~~~FD~V~~~~v  140 (254)
T Consensus       123 ~~vAFIGSGPLPLTsivLa~~h~~~~~~~niD~d~~A~~~A~~lv~~~g~ls~~m~f~t~d~~~~~~~l~~~DvV~lAAL  202 (277)
T pfam03059       123 SRIAFIGSGPLPLTSIVLASYHLPDTSFDNYDIDGLANDRASKLVSSDPDLSSRMSFHTADVLDVTTELKAYDVVFLAAL  202 (277)
T ss_pred             CEEEEECCCCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCHHCCEEEEECCCCCCCCCCCCCCEEEEHHH
T ss_conf             44899637886138999988508873143312788999999999986553004728995264444444454768987211


Q ss_pred             H-HCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHCCCEEEE
Q ss_conf             1-026888899888875213332157743676602456415655431046789985712253889999999986983888
Q gi|254780872|r  141 I-EHVDNIPYFIKTCCSLLLSNGLMFISTINRNLKAMLLAIIGAEYLLQWLPKGTHQYDKFIKPTEMECFLAANKVKIID  219 (254)
Q Consensus       141 l-eHv~d~~~~l~~~~~~LkpgG~liist~Nr~~~s~~~~i~~ae~il~~~P~gtH~~~~Fi~p~el~~~l~~~g~~~~~  219 (254)
T Consensus       203 VGm~~e~K~~I~~hL~k~m~~Ga~l~~----Rsa~-------GlR~~LY--p~--------vd~~~------~~GFe~l~  255 (277)
T pfam03059       203 VGMDKEEKAKVIDHLGKHMAPGALLVL----RSAH-------GARAFLY--PV--------VDPCD------LRGFEVLS  255 (277)
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCEEEE----ECCH-------HHHHHCC--CC--------CCHHH------CCCCEEEE
T ss_conf             354333599999999974589967999----6112-------1787628--87--------89667------38707999


Q ss_pred             EEEEEECCCCCEEEECCCCCCEEEEEEEECCCC
Q ss_conf             550576677775786478864517999975877
Q gi|254780872|r  220 RVGVVYNVFCNKWQLSAKNMDVNYMVLGHLPKT  252 (254)
Q Consensus       220 ~~g~~~~p~~~~w~~~~~~~~vnY~~~~~kp~~  252 (254)
T Consensus       256 ~----~hP---------~~~ViNSvI~~rk~~~  275 (277)
T pfam03059       256 V----YHP---------TDEVINSVIVARKKIV  275 (277)
T ss_pred             E----ECC---------CCCCEEEEEEEECCCC
T ss_conf             9----889---------9984113899833777