HHsearch alignment for GI: 254780872 and conserved domain: pfam03269
>pfam03269 DUF268 Caenorhabditis protein of unknown function, DUF268.
Probab=97.40 E-value=0.00027 Score=47.28 Aligned_cols=97 Identities=22% Similarity=0.292 Sum_probs=61.2
Q ss_pred HHCCEEEECCCHHHHHHHHH-HCCC-CEEEECCHHHHHHH-HHHHHHCCCC-CCCCCCCCCCCCCCCCCCHHHHEECCCH
Q ss_conf 01628885698569999997-3198-16995213567788-8865310112-1111221001232111530130012431
Q gi|254780872|r 66 KGLRILDLGCGGGLLSEPMA-QMGA-TVTGIDPSTKNIAI-AKNHANMKNI-NIDYRVSCAEEIAETDEKFDIILNMEVI 141 (254)
Q Consensus 66 ~g~~VLDiGCG~G~~s~~la-~~g~-~V~giD~S~~~i~~-Ak~~a~~~~~-~i~~~~~~~~~l~~~~~~FD~V~~~~vl 141 (254)
T Consensus 1 ~gk~glVvGS~~PWv-E~~aL~~GA~~vlTvEYn~l~i~~~~~~r--lssi~p~ef----~~~~~~~~~~FD~a~SfSSi 73 (177)
T pfam03269 1 DGKSGVVIGSMQPWV-EVSALQNGASKILTVEYNKLTIQEEFRDR--LSSILPTDF----AKNFKKYAESFDFAASFSSI 73 (177)
T ss_pred CCCEEEEECCCCHHH-HHHHHHCCCCCEEEEEECCCCCCCHHHHC--CCCCCHHHH----HHHHHHHCCCEEEEEEEEEE
T ss_conf 995189984775399-99999818873489972355566133210--011568899----99987523532389996124
Q ss_pred HCC-----C---CH---HHHHHHHHHHCCCCCEEEEECC
Q ss_conf 026-----8---88---8998888752133321577436
Q gi|254780872|r 142 EHV-----D---NI---PYFIKTCCSLLLSNGLMFISTI 169 (254)
Q Consensus 142 eHv-----~---d~---~~~l~~~~~~LkpgG~liist~ 169 (254)
T Consensus 74 EH~GLGRYGDpidp~Gdlk~m~~i~~~Lk~~G~l~l~vP 112 (177)
T pfam03269 74 EHSGLGRYGDPIDPIGDLREMLKIKCVLKKGGLLFLGLP 112 (177)
T ss_pred EECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 440565568977985109999999986178967999953