HHsearch alignment for GI: 254780872 and conserved domain: pfam03291

>pfam03291 Pox_MCEL mRNA capping enzyme. This family of enzymes are related to pfam03919.
Probab=99.59  E-value=1.7e-14  Score=110.60  Aligned_cols=209  Identities=16%  Similarity=0.225  Sum_probs=119.9

Q ss_pred             CCCCHHHHHHHHHHHHHH--CCC--CCCCHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEECCCH-HHHHHH
Q ss_conf             789889999999998874--688--887126775175659999999886518764445880016288856985-699999
Q gi|254780872|r    9 TTKNQDAINQFSNIASEW--WEP--TGKFKPLHQINPVRIKYIQDKIMQHFQCKSDDTHPFKGLRILDLGCGG-GLLSEP   83 (254)
Q Consensus         9 ~t~~~~ei~~F~~~a~~W--wD~--~g~~~~Lh~~N~~R~~~I~~~i~~~~~~~~~~~~~l~g~~VLDiGCG~-G~~s~~   83 (254)
T Consensus         8 ~~~~~~V~~HYN~~~~~~~~~~~R~~S~I~~LR~FN----NwVKs~LI~~~~~~~~~~--~~~~~VLDl~CGkGGDL~Kw   81 (327)
T pfam03291         8 SNIVDIVAAHYNELPESGIDLKKRQDSTIDQLRNFN----NWIKSLLISLYASKTFQD--KPKRKVLDLDCGKGGDLEKY   81 (327)
T ss_pred             CCHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHH----HHHHHHHHHHHHHHHHCC--CCCCEEEEECCCCCCCHHHH
T ss_conf             885369998733110126122334138517788731----899999999998875146--88987998368664457889


Q ss_pred             HHHCCCCEEEECCHHHHHHHHHHHHHCCCC-----------CCCCCCCCC-----C-CCCCCCCCHHHHEECCCHHCC-C
Q ss_conf             973198169952135677888865310112-----------111122100-----1-232111530130012431026-8
Q gi|254780872|r   84 MAQMGATVTGIDPSTKNIAIAKNHANMKNI-----------NIDYRVSCA-----E-EIAETDEKFDIILNMEVIEHV-D  145 (254)
Q Consensus        84 la~~g~~V~giD~S~~~i~~Ak~~a~~~~~-----------~i~~~~~~~-----~-~l~~~~~~FD~V~~~~vleHv-~  145 (254)
T Consensus        82 ~~~~i~~~vgiDis~~sI~~A~~RY~~~~~~~~~~~~~~~f~~~f~~~D~~~~~l~~~~~~~~~~FDvVS~QFAiHY~Fe  161 (327)
T pfam03291        82 FKGGISGLIGTDIAEVSIEQAQERYNDLNSRSKSKYYKFDFIAEFITGDCFVSSVREVFEPGQRKFDIVSWQFAIHYSFE  161 (327)
T ss_pred             HHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCEEEHHHHHHHHHC
T ss_conf             74798689996689999999999999864211444456675001231562156787753577885037751787898764


Q ss_pred             CH---HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHH-------HHHHH-HHCCC-----CC-CCC-----------CCH
Q ss_conf             88---89988887521333215774367660245641-------56554-31046-----78-998-----------571
Q gi|254780872|r  146 NI---PYFIKTCCSLLLSNGLMFISTINRNLKAMLLA-------IIGAE-YLLQW-----LP-KGT-----------HQY  197 (254)
Q Consensus       146 d~---~~~l~~~~~~LkpgG~liist~Nr~~~s~~~~-------i~~ae-~il~~-----~P-~gt-----------H~~  197 (254)
T Consensus       162 se~~a~~~l~Nvs~~Lk~GG~FIGT~~d~~~i~~~l~~~~~~~~~~gN~~y~i~f~~~~~~~~fG~~y~f~l~~~v~~~~  241 (327)
T pfam03291       162 SEEKARTMLRNLAELLASGGKFIGTTPDGDFIIKKLTATFVEHKSFGNSIYYVSFEKDPPRPPFGIKYVYNLEDMVTDVP  241 (327)
T ss_pred             CHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCC
T ss_conf             89999999999998605898899996678999999986034532058603899946889999998679999721178887


Q ss_pred             HHCCCHHHHHHHHHHCCCEEEEEEEE
Q ss_conf             22538899999999869838885505
Q gi|254780872|r  198 DKFIKPTEMECFLAANKVKIIDRVGV  223 (254)
Q Consensus       198 ~~Fi~p~el~~~l~~~g~~~~~~~g~  223 (254)
T Consensus       242 EYlV~~~~~~~l~~eygleLv~~~~F  267 (327)
T pfam03291       242 EYLVPFETLVELAEEYGLELVDKKTF  267 (327)
T ss_pred             EEECCHHHHHHHHHHCCCEEEEECCH
T ss_conf             31367999999999859899994687