HHsearch alignment for GI: 254780872 and conserved domain: pfam03291
>pfam03291 Pox_MCEL mRNA capping enzyme. This family of enzymes are related to pfam03919.
Probab=99.59 E-value=1.7e-14 Score=110.60 Aligned_cols=209 Identities=16% Similarity=0.225 Sum_probs=119.9
Q ss_pred CCCCHHHHHHHHHHHHHH--CCC--CCCCHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEECCCH-HHHHHH
Q ss_conf 789889999999998874--688--887126775175659999999886518764445880016288856985-699999
Q gi|254780872|r 9 TTKNQDAINQFSNIASEW--WEP--TGKFKPLHQINPVRIKYIQDKIMQHFQCKSDDTHPFKGLRILDLGCGG-GLLSEP 83 (254)
Q Consensus 9 ~t~~~~ei~~F~~~a~~W--wD~--~g~~~~Lh~~N~~R~~~I~~~i~~~~~~~~~~~~~l~g~~VLDiGCG~-G~~s~~ 83 (254)
T Consensus 8 ~~~~~~V~~HYN~~~~~~~~~~~R~~S~I~~LR~FN----NwVKs~LI~~~~~~~~~~--~~~~~VLDl~CGkGGDL~Kw 81 (327)
T pfam03291 8 SNIVDIVAAHYNELPESGIDLKKRQDSTIDQLRNFN----NWIKSLLISLYASKTFQD--KPKRKVLDLDCGKGGDLEKY 81 (327)
T ss_pred CCHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHH----HHHHHHHHHHHHHHHHCC--CCCCEEEEECCCCCCCHHHH
T ss_conf 885369998733110126122334138517788731----899999999998875146--88987998368664457889
Q ss_pred HHHCCCCEEEECCHHHHHHHHHHHHHCCCC-----------CCCCCCCCC-----C-CCCCCCCCHHHHEECCCHHCC-C
Q ss_conf 973198169952135677888865310112-----------111122100-----1-232111530130012431026-8
Q gi|254780872|r 84 MAQMGATVTGIDPSTKNIAIAKNHANMKNI-----------NIDYRVSCA-----E-EIAETDEKFDIILNMEVIEHV-D 145 (254)
Q Consensus 84 la~~g~~V~giD~S~~~i~~Ak~~a~~~~~-----------~i~~~~~~~-----~-~l~~~~~~FD~V~~~~vleHv-~ 145 (254)
T Consensus 82 ~~~~i~~~vgiDis~~sI~~A~~RY~~~~~~~~~~~~~~~f~~~f~~~D~~~~~l~~~~~~~~~~FDvVS~QFAiHY~Fe 161 (327)
T pfam03291 82 FKGGISGLIGTDIAEVSIEQAQERYNDLNSRSKSKYYKFDFIAEFITGDCFVSSVREVFEPGQRKFDIVSWQFAIHYSFE 161 (327)
T ss_pred HHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCEEEHHHHHHHHHC
T ss_conf 74798689996689999999999999864211444456675001231562156787753577885037751787898764
Q ss_pred CH---HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHH-------HHHHH-HHCCC-----CC-CCC-----------CCH
Q ss_conf 88---89988887521333215774367660245641-------56554-31046-----78-998-----------571
Q gi|254780872|r 146 NI---PYFIKTCCSLLLSNGLMFISTINRNLKAMLLA-------IIGAE-YLLQW-----LP-KGT-----------HQY 197 (254)
Q Consensus 146 d~---~~~l~~~~~~LkpgG~liist~Nr~~~s~~~~-------i~~ae-~il~~-----~P-~gt-----------H~~ 197 (254)
T Consensus 162 se~~a~~~l~Nvs~~Lk~GG~FIGT~~d~~~i~~~l~~~~~~~~~~gN~~y~i~f~~~~~~~~fG~~y~f~l~~~v~~~~ 241 (327)
T pfam03291 162 SEEKARTMLRNLAELLASGGKFIGTTPDGDFIIKKLTATFVEHKSFGNSIYYVSFEKDPPRPPFGIKYVYNLEDMVTDVP 241 (327)
T ss_pred CHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCC
T ss_conf 89999999999998605898899996678999999986034532058603899946889999998679999721178887
Q ss_pred HHCCCHHHHHHHHHHCCCEEEEEEEE
Q ss_conf 22538899999999869838885505
Q gi|254780872|r 198 DKFIKPTEMECFLAANKVKIIDRVGV 223 (254)
Q Consensus 198 ~~Fi~p~el~~~l~~~g~~~~~~~g~ 223 (254)
T Consensus 242 EYlV~~~~~~~l~~eygleLv~~~~F 267 (327)
T pfam03291 242 EYLVPFETLVELAEEYGLELVDKKTF 267 (327)
T ss_pred EEECCHHHHHHHHHHCCCEEEEECCH
T ss_conf 31367999999999859899994687