HHsearch alignment for GI: 254780872 and conserved domain: pfam07091
>pfam07091 FmrO Ribosomal RNA methyltransferase (FmrO). This family consists of several bacterial ribosomal RNA methyltransferase (aminoglycoside-resistance methyltransferase) proteins.
Probab=96.96 E-value=0.0017 Score=42.34 Aligned_cols=154 Identities=17% Similarity=0.135 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEECCCHHHHHHHHH-HC-CCCEEEECCHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 565999999988651876444588001628885698569999997-31-9816995213567788886531011211112
Q gi|254780872|r 41 PVRIKYIQDKIMQHFQCKSDDTHPFKGLRILDLGCGGGLLSEPMA-QM-GATVTGIDPSTKNIAIAKNHANMKNINIDYR 118 (254)
Q Consensus 41 ~~R~~~I~~~i~~~~~~~~~~~~~l~g~~VLDiGCG~G~~s~~la-~~-g~~V~giD~S~~~i~~Ak~~a~~~~~~i~~~ 118 (254)
T Consensus 83 rERL~~ld~fY~~if~~~~------~p~sVlDlaCGlNPLa~pwm~~~~~~~Y~a~DId~~~i~fi~~~l~~l~v~~~~~ 156 (248)
T pfam07091 83 RERLPILDEFYAEIFGALP------PPRSVLDLACGLNPLAVPWMPLAPDATYHAYDIDRALIEFIRAFLALLGVPGEVR 156 (248)
T ss_pred HHHHHHHHHHHHHHHHCCC------CCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEE
T ss_conf 4210358999999983489------9864420002688301423368998679997077789999999998629876379
Q ss_pred CCCCCCCCCCCCCHHHHEECCCHHCCCCHHH--HHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 2100123211153013001243102688889--98888752133321577436766024564156554310467899857
Q gi|254780872|r 119 VSCAEEIAETDEKFDIILNMEVIEHVDNIPY--FIKTCCSLLLSNGLMFISTINRNLKAMLLAIIGAEYLLQWLPKGTHQ 196 (254)
Q Consensus 119 ~~~~~~l~~~~~~FD~V~~~~vleHv~d~~~--~l~~~~~~LkpgG~liist~Nr~~~s~~~~i~~ae~il~~~P~gtH~ 196 (254)
T Consensus 157 ~~Dl~~~~-p~~~~DvaLllK~lp~LE~q~~G~g~~ll-~~l~~-~~vVVSFPtrsLgGR~---------kGm~~--~-- 220 (248)
T pfam07091 157 VRDLLTDP-PAEPADVALLLKTLPLLEQQRRGAGLDLL-DALNA-PHVVVSFPTRSLGGRS---------KGMEA--T-- 220 (248)
T ss_pred EEEECCCC-CCCCCCCHHHHHHHHHHHHHCCCCHHHHH-HHHCC-CEEEEECCCCCCCCCC---------CCCCC--C--
T ss_conf 87610479-98873400475527789887026078999-98379-8389965641226766---------64446--6--
Q ss_pred HHHCCCHHHHHHHHHHCCCEEEEEE
Q ss_conf 1225388999999998698388855
Q gi|254780872|r 197 YDKFIKPTEMECFLAANKVKIIDRV 221 (254)
Q Consensus 197 ~~~Fi~p~el~~~l~~~g~~~~~~~ 221 (254)
T Consensus 221 y-----~~~fe~~~~~r~~~~~~~~ 240 (248)
T pfam07091 221 Y-----SAWFEALVAGRGWIVDRLE 240 (248)
T ss_pred H-----HHHHHHHCCCCCCEEEEEE
T ss_conf 8-----8999976036874345666