HHsearch alignment for GI: 254780872 and conserved domain: pfam08123

>pfam08123 DOT1 Histone methylation protein DOT1. The DOT1 domain regulates gene expression by methylating histone H3. H3 methylation by DOT1 has been shown to be required for the DNA damage checkpoint in yeast.
Probab=97.62  E-value=0.00025  Score=47.49  Aligned_cols=137  Identities=16%  Similarity=0.205  Sum_probs=81.6

Q ss_pred             CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEECCCHHHHHHHH-HHCC
Q ss_conf             898899999999988746888871267751756599999998865187644458800162888569856999999-7319
Q gi|254780872|r   10 TKNQDAINQFSNIASEWWEPTGKFKPLHQINPVRIKYIQDKIMQHFQCKSDDTHPFKGLRILDLGCGGGLLSEPM-AQMG   88 (254)
Q Consensus        10 t~~~~ei~~F~~~a~~WwD~~g~~~~Lh~~N~~R~~~I~~~i~~~~~~~~~~~~~l~g~~VLDiGCG~G~~s~~l-a~~g   88 (254)
T Consensus         6 ~p~~~~L~~Y~~fs~~v---YGEl------lp---~fis~ii~~-~~l~-------~~dvF~DLGSGVGnvv~QaAl~tg   65 (205)
T pfam08123         6 SPDANKLNHYKAFSNEV---YGEL------LP---EFLSDVLDK-CNLG-------PQDVFVDLGSGVGNCVLQAALEFG   65 (205)
T ss_pred             CCCHHHHCCCCCCCCCC---CCCC------CH---HHHHHHHHH-HCCC-------CCCEEEECCCCCCHHHHHHHHHHC
T ss_conf             69967860678999755---1135------88---999999998-3989-------768899858883299999998709


Q ss_pred             CC-EEEECCHHHHHHHHHH-------HHHC---CCCCCCCCCCCCCCCCCCC---CCHHHHEECCCHHCCCCHHHHHHHH
Q ss_conf             81-6995213567788886-------5310---1121111221001232111---5301300124310268888998888
Q gi|254780872|r   89 AT-VTGIDPSTKNIAIAKN-------HANM---KNINIDYRVSCAEEIAETD---EKFDIILNMEVIEHVDNIPYFIKTC  154 (254)
Q Consensus        89 ~~-V~giD~S~~~i~~Ak~-------~a~~---~~~~i~~~~~~~~~l~~~~---~~FD~V~~~~vleHv~d~~~~l~~~  154 (254)
T Consensus        66 c~~s~GiEi~~~~a~~A~~~~~~~~~~~~~~G~~~~~~~l~~gdFl~~~~~~~~~~~a~VI~vNN~~F-~~~Ln~~L~e~  144 (205)
T pfam08123        66 CKLSFGCEIMDNASNLAELQDEEFKKRCKLFGKKLGKIEFIRGSFLDNERVEEIIPEADVILVNNFAF-DPELNLQLKEM  144 (205)
T ss_pred             CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHCCCCEEEEECCCC-CHHHHHHHHHH
T ss_conf             65388888656689999999999999999958876873899777788588998634798899943246-98899999999


Q ss_pred             HHHCCCCCEEEEEC
Q ss_conf             75213332157743
Q gi|254780872|r  155 CSLLLSNGLMFIST  168 (254)
Q Consensus       155 ~~~LkpgG~liist  168 (254)
T Consensus       145 f~~lk~GtkI-VS~  157 (205)
T pfam08123       145 LQDLKDGCKI-ISL  157 (205)
T ss_pred             HHCCCCCCEE-EEC
T ss_conf             9729998889-977