HHsearch alignment for GI: 254780872 and conserved domain: pfam08704
>pfam08704 GCD14 tRNA methyltransferase complex GCD14 subunit. GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA.
Probab=98.97 E-value=7.9e-09 Score=75.43 Aligned_cols=101 Identities=13% Similarity=0.065 Sum_probs=77.3
Q ss_pred HHHCCEEEECCCHHHHHHHHHHCC---CCEEEECCHHHHHHHHHHHHHCCCC--CCCCCCCCCCCCCC---CCCCHHHHE
Q ss_conf 001628885698569999997319---8169952135677888865310112--11112210012321---115301300
Q gi|254780872|r 65 FKGLRILDLGCGGGLLSEPMAQMG---ATVTGIDPSTKNIAIAKNHANMKNI--NIDYRVSCAEEIAE---TDEKFDIIL 136 (254)
Q Consensus 65 l~g~~VLDiGCG~G~~s~~la~~g---~~V~giD~S~~~i~~Ak~~a~~~~~--~i~~~~~~~~~l~~---~~~~FD~V~ 136 (254)
T Consensus 101 ~PG~~VlEaGtGSGsLT~~Laravgp~G~v~t~E~~e~r~~~A~~n~~~~g~~~~v~~~~rDv~~~gf~~~~~~~~D~Vf 180 (309)
T pfam08704 101 KPGSVVCESGTGSGSLSHAIARTVAPTGHLYTFEFHEQRADKAREEFREHGLDSLVTVTHRDVCKSGFDTEVSNKADAVF 180 (309)
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCHHCCCCCCCCCCCCCEEE
T ss_conf 99999998367842999999997488865999844789999999999874987505889852001366644566435899
Q ss_pred ECCCHHCCCCHHHHHHHHHHHCC-CCCEEEEECCC
Q ss_conf 12431026888899888875213-33215774367
Q gi|254780872|r 137 NMEVIEHVDNIPYFIKTCCSLLL-SNGLMFISTIN 170 (254)
Q Consensus 137 ~~~vleHv~d~~~~l~~~~~~Lk-pgG~liist~N 170 (254)
T Consensus 181 L-----Dlp~PW~ai~~~~~~Lk~~Gg~l~~f~P~ 210 (309)
T pfam08704 181 L-----DLPAPWEAIPHAAKALKVEGGRLCSFSPC 210 (309)
T ss_pred E-----CCCCHHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf 7-----58997998899998606899689999198