RPSBLAST alignment for GI: 254780872 and conserved domain: TIGR03534
>gnl|CDD|163311 TIGR03534, RF_mod_PrmC, protein-(glutamine-N5) methyltransferase, release factor-specific. Members of this protein family are HemK (PrmC), a protein once thought to be involved in heme biosynthesis but now recognized to be a protein-glutamine methyltransferase that modifies the peptide chain release factors. All members of the seed alignment are encoded next to the release factor 1 gene (prfA) and confirmed by phylogenetic analysis. SIMBAL analysis (manuscript in prep.) shows the motif [LIV]PRx[DE]TE (in Escherichia coli, IPRPDTE) confers specificity for the release factors rather than for ribosomal protein L3. Length = 251
Score = 42.1 bits (100), Expect = 1e-04
Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 28/95 (29%)
Query: 66 KGLRILDLGCGGG-----LLSE-PMAQMGATVTGIDPSTKNIAIAKNHANMKNINIDYRV 119
LR+LDLG G G L E P A VT +D S + +A+A+ N + +D V
Sbjct: 87 GPLRVLDLGTGSGAIALALAKERP----DARVTAVDISPEALAVAR--KNAARLGLD-NV 139
Query: 120 SC-----AEEIAETDEKFDIILNMEVIEHVDNIPY 149
+ E + KFD+I V N PY
Sbjct: 140 TFLQSDWFEPLP--GGKFDLI--------VSNPPY 164