HHsearch alignment for GI: 254780873 and conserved domain: COG0527
>COG0527 LysC Aspartokinases [Amino acid transport and metabolism].
Probab=100.00 E-value=0 Score=840.14 Aligned_cols=399 Identities=44% Similarity=0.634 Sum_probs=375.4
Q ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHH-------------------HHHCCC
Q ss_conf 9669996085845888999999999999996799889998068730489999999-------------------861489
Q gi|254780873|r 1 MARIVMKFGGTSVANIDCIRSAALHVKREVDRGQEVAMVVSAMSGETDRLAELCR-------------------QVTSID 61 (411)
Q Consensus 1 M~~iV~KfGGtSv~~~~~i~~v~~~i~~~~~~g~~~ivVvSA~~g~Td~L~~l~~-------------------~~~~~~ 61 (411)
T Consensus 1 m~~iV~KFGGTSva~~e~i~~va~iv~~~~~~g~~vVVVvSA~~~vTd~Lv~~a~~~~~~~~~~~~~~~~~~~~el~~~~ 80 (447)
T COG0527 1 MRLIVQKFGGTSVADAERILRVADIVKEDSEEGVKVVVVVSAMGGVTDLLVALAEGAESGRDAVAEQRHRDIASELILDP 80 (447)
T ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 95089986875538889999999999854633971899978987745899999863314452057888999999874151
Q ss_pred --------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf --------------------------988999999831299999999999843998635673324551213355200012
Q gi|254780873|r 62 --------------------------NARERDVVISTGEQVSSGLMVLALQSLGIQAISLQGWQIPIMTDSLHGMARICR 115 (411)
Q Consensus 62 --------------------------~~~~~d~i~s~GE~~s~~l~a~~l~~~G~~a~~l~~~~~~i~t~~~~~~a~~~~ 115 (411)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~lls~GE~~Sa~lla~~L~~~Gv~A~~~~~~~~~i~t~~~~~~a~i~~ 160 (447)
T COG0527 81 FIAARLAEVIAEFKKVLLGIALLGEVSPRERDELLSLGERLSAALLAAALNALGVDARSLDGRQAGIATDSNHGNARILD 160 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEECHHHCEEEECCCCCCCCCCH
T ss_conf 04566766666666766666641479878999998505488999999999967996599755884255357666553103
Q ss_pred CCCCC-HHHHHHHCCEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHCHHHHHHHCCHHHHEECCCCCCCCCCEECC
Q ss_conf 36210-03343106805860343335568424430686242899999884734556534614402458421234411056
Q gi|254780873|r 116 VDEKK-IVTHLKKKQVVVITGFQGLSHDNSVTTLGRGGSDTSAVAIAAAIKADRCDIYTDVCGIYTTDPRIEPKAHLMKK 194 (411)
Q Consensus 116 ~~~~~-l~~~l~~~~v~v~~Gf~g~~~~g~~ttlgRGGSD~tA~~ia~~l~A~~~~i~tdV~Gi~taDPr~v~~a~~i~~ 194 (411)
T Consensus 161 ~~~~~~l~~~~~~~~v~Vv~GF~G~~~~G~~tTLGRGGSD~SA~~laa~l~Ad~~~I~TDVdGI~TaDPRiVp~Ar~i~~ 240 (447)
T COG0527 161 EDSERRLLRLLEEGKVPVVAGFQGINEDGETTTLGRGGSDYSAAALAAALGADEVEIWTDVDGVYTADPRIVPDARLLPE 240 (447)
T ss_pred HHHHHHHHHHHCCCCEEEECCCEEECCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEECCC
T ss_conf 55666678874469779951866516999889847984788999999971998899998788775689977886457684
Q ss_pred CCHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC-
Q ss_conf 7999999988403110137887643313852676112377777654354545421012223101112346620001277-
Q gi|254780873|r 195 ISFEEMLEMSSLGAKVMQVRSVELAMLYKMCLFVRSSFEDHGQQEQLGTLICSGEDIMEKKVITGIAYTKDEAQISLRR- 273 (411)
Q Consensus 195 lsy~Ea~eLa~~Gakvlhp~~~~~~~~~~ipi~i~ntf~~~~~~~~~GT~I~~~~~~~~~~~Vk~Is~~~~i~~Iti~~- 273 (411)
T Consensus 241 isyeEa~ELA~~GAkVLHprav~pa~~~~Ip~~i~~t~~p----~~~GTlI~~~~~~~~-~~v~gIa~~~~~~~i~v~~~ 315 (447)
T COG0527 241 ISYEEALELAYLGAKVLHPRAVEPAMRSGIPLRIKNTFNP----DAPGTLITAETESDE-PVVKGIALDDNVALITVSGP 315 (447)
T ss_pred CCHHHHHHHHHCCCHHCCHHHHHHHHHCCCCEEEEECCCC----CCCCEEEECCCCCCC-CCEEEEECCCCEEEEEEECC
T ss_conf 6999999999778521499888899876991899716999----999539956776767-72488970798589999714
Q ss_pred -CCCCCCCCCHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEEC
Q ss_conf -5000484100014554128501112344322223331012123024776688789888605961589748916999966
Q gi|254780873|r 274 -LRDHPGISASIFSPLAEAHINIDMIIQNVSEDGQYVDITFTTPSSSLEKALAVLSDNKENIGYDVIQHEDNLVKISAIG 352 (411)
Q Consensus 274 -~~~~~g~~a~If~~La~~~I~VdmI~qs~s~~~~~~~Isf~i~~~d~~~~~~~L~~~~~~~~~~~I~~~~~~a~ISvVG 352 (411)
T Consensus 316 ~~~~~~g~~a~if~~l~~~~i~v~~I~q~~~~~----~i~~~v~~~~~~~a~~~l~~~~~~~~~-~v~~~~~~a~vsiVG 390 (447)
T COG0527 316 GMNGMVGFAARVFGILAEAGINVDLITQSISEV----SISFTVPESDAPRALRALLEEKLELLA-EVEVEEGLALVSIVG 390 (447)
T ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCC----EEEEEECHHHHHHHHHHHHHHHHHHCC-EEEEECCEEEEEEEC
T ss_conf 766652479999999997599679999236787----599997344578999999998863146-078417855999974
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCEEEEEECHHHHHHHHHHHHHHCCCC
Q ss_conf 786678557999999998679829999707848999970889999999999870977
Q gi|254780873|r 353 IGMQSYAGVASAFFLCLAEKGINIKAITTSEIKISVLIDSAYTELAVRSLHSCYGLD 409 (411)
Q Consensus 353 ~gm~~~~Giaakif~aL~~~~InI~~issSe~~IS~VV~~~d~~~Av~~LH~~F~ld 409 (411)
T Consensus 391 ~gm~~~~gvaa~~f~aL~~~~ini~~issSe~~Is~vV~~~~~~~av~~LH~~~~~~ 447 (447)
T COG0527 391 AGMRSNPGVAARIFQALAEENINIIMISSSEISISFVVDEKDAEKAVRALHEAFFLG 447 (447)
T ss_pred CCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHCC
T ss_conf 351359678999999997479957999747856999984288999999999997259