HHsearch alignment for GI: 254780873 and conserved domain: PRK12353

Probab=99.43  E-value=4.6e-12  Score=101.13  Aligned_cols=220  Identities=20%  Similarity=0.266  Sum_probs=127.6

Q ss_pred             CCEEEEEECCCCCCCH--------HHHHHHHHHHHHHHHCCCCEEEEEECCCC--HHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf             9669996085845888--------99999999999999679988999806873--0489999999861489988999999
Q gi|254780873|r    1 MARIVMKFGGTSVANI--------DCIRSAALHVKREVDRGQEVAMVVSAMSG--ETDRLAELCRQVTSIDNARERDVVI   70 (411)
Q Consensus         1 M~~iV~KfGGtSv~~~--------~~i~~v~~~i~~~~~~g~~~ivVvSA~~g--~Td~L~~l~~~~~~~~~~~~~d~i~   70 (411)
T Consensus         2 ~k~IVIalGGNAl~~~~~t~~~Q~~~~~~~a~~ia~l~~~G~~~VitHG--nGPQVG~lll~~~~~~~~~~~~~pld~~~   79 (312)
T PRK12353          2 MKKIVVALGGNALGSSDGSAEEQLEAVKKTAKSLVDLIEEGHEVVITHG--NGPQVGNLLLQQAAADSEKNPAMPLDVCV   79 (312)
T ss_pred             CCEEEEEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECC--CCHHHHHHHHHHHHHCCCCCCCCEECCHH
T ss_conf             8449998372531899999899999999999999999988996999838--84488999998665426888982110143


Q ss_pred             --HH---HHHHHHHHHHHHHHHCCCCCCCC--------CCCC---------------------------CCCCCCCCCCC
Q ss_conf             --83---12999999999998439986356--------7332---------------------------45512133552
Q gi|254780873|r   71 --ST---GEQVSSGLMVLALQSLGIQAISL--------QGWQ---------------------------IPIMTDSLHGM  110 (411)
Q Consensus        71 --s~---GE~~s~~l~a~~l~~~G~~a~~l--------~~~~---------------------------~~i~t~~~~~~  110 (411)
T Consensus        80 a~tqG~IGy~l~q~l~-~~l~~~g~~~~v~tlvtqv~Vd~~Dpaf~~ptKpIG~~y~~~ea~~l~~~~g~~~~~d~g~G~  158 (312)
T PRK12353         80 AMSQGYIGYWLQNALD-NELLKRGINKPVATVVTQVEVDANDPAFKNPTKPIGPFYTEEEAEKLAKEKGWTFKEDAGRGY  158 (312)
T ss_pred             HHCCCHHHHHHHHHHH-HHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCE
T ss_conf             4303069999999999-999845899864899989988787600027887656656899999999727974424388862


Q ss_pred             CCC------CC-CCCCCHHHHHHHCCEEEEECCCCC--CCCCCEEEECCCCC-----CHHHHHHHHHHCHHHHHHHCCHH
Q ss_conf             000------12-362100334310680586034333--55684244306862-----42899999884734556534614
Q gi|254780873|r  111 ARI------CR-VDEKKIVTHLKKKQVVVITGFQGL--SHDNSVTTLGRGGS-----DTSAVAIAAAIKADRCDIYTDVC  176 (411)
Q Consensus       111 a~~------~~-~~~~~l~~~l~~~~v~v~~Gf~g~--~~~g~~ttlgRGGS-----D~tA~~ia~~l~A~~~~i~tdV~  176 (411)
T Consensus       159 RRVV~SP~P~~iie~~~I~~L~~~g~IvIa~GGGGIPV~~~~g~---~~Gv~aVIdkDlaaa~LA~~l~Ad~lliLTdV~  235 (312)
T PRK12353        159 RRVVPSPKPVDIIEKEAIKTLVEAGVVVIAAGGGGIPVVREGGG---LKGVEAVIDKDFASALLAELIDADLLIILTAVD  235 (312)
T ss_pred             EEEECCCCCCCEECHHHHHHHHHCCCEEEECCCCCCCEECCCCC---EECCEEEECCCHHHHHHHHHCCCCEEEEEECCH
T ss_conf             77506999730223999999997897899648887765767994---466133315338889999971998799971634


Q ss_pred             HHEECCCCCCCCCCEECCCCHHHHHHHHH---C-----CCCCHHHHHHHHHHHCCC-EEEEEC
Q ss_conf             40245842123441105679999999884---0-----311013788764331385-267611
Q gi|254780873|r  177 GIYTTDPRIEPKAHLMKKISFEEMLEMSS---L-----GAKVMQVRSVELAMLYKM-CLFVRS  230 (411)
Q Consensus       177 Gi~taDPr~v~~a~~i~~lsy~Ea~eLa~---~-----Gakvlhp~~~~~~~~~~i-pi~i~n  230 (411)
T Consensus       236 ~V~~n~g--~p~q~~l~~lt~~e~~~~~~~G~F~~GsM~PKVe--Aai~fv~~gg~~~aiIt~  294 (312)
T PRK12353        236 KVYINFG--KPNQKKLDRVTVSELEKYIEEGQFAPGSMLPKVE--AAISFVESGGKRKAIITS  294 (312)
T ss_pred             HHHHCCC--CCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHH--HHHHHHHHCCCCEEEECC
T ss_conf             6765289--9861332138899999999779988888269999--999999948983799898