HHsearch alignment for GI: 254780873 and conserved domain: TIGR02078

>TIGR02078 AspKin_pair Pyrococcus aspartate kinase subunit, putative; InterPro: IPR011819 This family consists of proteins restricted to and found as paralogous pairs (typically close together) in species of Pyrococcus, a hyperthermophilic archaeal genus. Members are always found close to other genes of threonine biosynthesis and appear to represent the Pyrococcal form of aspartate kinase. Alignment to aspartokinase III from Escherichia coli shows that 300 N-terminal and 20 C-terminal amino acids are homologous, but the form in Pyrococcus lacks ~100 amino acids in between..
Probab=100.00  E-value=0  Score=387.93  Aligned_cols=292  Identities=30%  Similarity=0.451  Sum_probs=230.4

Q ss_pred             EEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHH-------------------------
Q ss_conf             6999608584588899999999999999679988999806873048999999986-------------------------
Q gi|254780873|r    3 RIVMKFGGTSVANIDCIRSAALHVKREVDRGQEVAMVVSAMSGETDRLAELCRQV-------------------------   57 (411)
Q Consensus         3 ~iV~KfGGtSv~~~~~i~~v~~~i~~~~~~g~~~ivVvSA~~g~Td~L~~l~~~~-------------------------   57 (411)
T Consensus         1 ~iV~KFGGsSvr~~--F~eA~~L~~~L~-E~~~v~VVVSALkGiTD~L~~ya~t~D~~~~~~i~~~y~~f~~~~gvd~~~   77 (341)
T TIGR02078         1 MIVVKFGGSSVRYD--FEEALELVKSLS-EEKEVVVVVSALKGITDELIRYANTFDKKAAVKIEEIYVEFAKELGVDLNI   77 (341)
T ss_pred             CEEEEECCCCHHHH--HHHHHHHHHHHC-CCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf             96898568413666--899999999851-698689998534442579998731104688999999999877750886223


Q ss_pred             ------------HCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CC
Q ss_conf             ------------14899-88999999831299999999999843998635673324551213355200012362----10
Q gi|254780873|r   58 ------------TSIDN-ARERDVVISTGEQVSSGLMVLALQSLGIQAISLQGWQIPIMTDSLHGMARICRVDE----KK  120 (411)
Q Consensus        58 ------------~~~~~-~~~~d~i~s~GE~~s~~l~a~~l~~~G~~a~~l~~~~~~i~t~~~~~~a~~~~~~~----~~  120 (411)
T Consensus        78 l~~~l~~~~n~~~dlP~keAL~D~I~S~GE~lSA~ifaeGL~~L~i~g~~v~p~d~-~~A~G~FGnafidik~Sk~~~k~  156 (341)
T TIGR02078        78 LSPYLKELFNPKPDLPPKEALRDYILSLGELLSAVIFAEGLKLLGINGKVVDPWDL-LVAKGEFGNAFIDIKKSKRNAKI  156 (341)
T ss_pred             HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEECCHHH-EEEECCCCCEEEEHHHHHHHHHH
T ss_conf             34678876236778781122356677775789999997013531203227652666-27743646547746465557778


Q ss_pred             HHHHHHHCCEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHCHHHHHHHCCHHHHEECCCCCCCCCCEECCCCHHHH
Q ss_conf             03343106805860343335568424430686242899999884734556534614402458421234411056799999
Q gi|254780873|r  121 IVTHLKKKQVVVITGFQGLSHDNSVTTLGRGGSDTSAVAIAAAIKADRCDIYTDVCGIYTTDPRIEPKAHLMKKISFEEM  200 (411)
Q Consensus       121 l~~~l~~~~v~v~~Gf~g~~~~g~~ttlgRGGSD~tA~~ia~~l~A~~~~i~tdV~Gi~taDPr~v~~a~~i~~lsy~Ea  200 (411)
T Consensus       157 ~~~~l~~G~iPvipGF~g-nlnGyrvTlGRGGSDYSAvalg~l~~s~~v~IMSdVEGIfTADPKLvPsArLIpY~SY~Ei  235 (341)
T TIGR02078       157 LYEVLESGKIPVIPGFYG-NLNGYRVTLGRGGSDYSAVALGVLLNSKLVAIMSDVEGIFTADPKLVPSARLIPYLSYEEI  235 (341)
T ss_pred             HHHHHHCCCEEEECCCCC-CCCCEEEEECCCCCHHHHHHHHHHHCCEEEEEEECCCEEEECCCCCCCCHHCCCCCCHHHH
T ss_conf             898886583022146206-8884489864786227999999875122689973456004358663750010333347799


Q ss_pred             HHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCHHCCCCCC---
Q ss_conf             99884031101378876433138526761123777776543545454210122231011123466--2000127750---
Q gi|254780873|r  201 LEMSSLGAKVMQVRSVELAMLYKMCLFVRSSFEDHGQQEQLGTLICSGEDIMEKKVITGIAYTKD--EAQISLRRLR---  275 (411)
Q Consensus       201 ~eLa~~Gakvlhp~~~~~~~~~~ipi~i~ntf~~~~~~~~~GT~I~~~~~~~~~~~Vk~Is~~~~--i~~Iti~~~~---  275 (411)
T Consensus       236 ~iAaK~GMkAl~wkA~~l~~e~~ip~lfGrt~d-----wr~GT~~s~~~s---~~Pl--~~y~~~~D~AEl~vv~~~~~i  305 (341)
T TIGR02078       236 LIAAKLGMKALQWKAADLAKEYKIPVLFGRTRD-----WRMGTVVSNRSS---GMPL--MVYKDGEDFAELLVVNVEREI  305 (341)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC-----CEEEEEEECCCC---CCCE--EEEECCCCEEEEEEEEEEECC
T ss_conf             997452057776652000157543587415466-----401267762658---8877--897046555778998520012


Q ss_pred             CCCCCCCHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHH
Q ss_conf             0048410001455412850111234432222333101212302477668878988
Q gi|254780873|r  276 DHPGISASIFSPLAEAHINIDMIIQNVSEDGQYVDITFTTPSSSLEKALAVLSDN  330 (411)
Q Consensus       276 ~~~g~~a~If~~La~~~I~VdmI~qs~s~~~~~~~Isf~i~~~d~~~~~~~L~~~  330 (411)
T Consensus       306 ~y~g~-----~v~e--------------E-g~-f~~~~~vp~~~~~~~irelHr~  339 (341)
T TIGR02078       306 SYPGY-----LVIE--------------E-GE-FWKLYKVPKEDGIEIIRELHRK  339 (341)
T ss_pred             CCCCE-----EEEE--------------C-CC-CEEEEEECHHHHHHHHHHHHHH
T ss_conf             55753-----7997--------------3-77-6379982503468999998664