HHsearch alignment for GI: 254780873 and conserved domain: cd02115
>cd02115 AAK Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK). The AAK superfamily includes kinases that phosphorylate a variety of amino acid substrates. These kinases catalyze the formation of phosphoric anhydrides, generally with a carboxylate, and use ATP as the source of the phosphoryl group; are involved in amino acid biosynthesis. Some of these kinases control the process via allosteric feed-back inhibition.
Probab=100.00 E-value=0 Score=390.57 Aligned_cols=240 Identities=32% Similarity=0.450 Sum_probs=220.9
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9960858458889999999999999967998899980687304899999998614----899889999998312999999
Q gi|254780873|r 5 VMKFGGTSVANIDCIRSAALHVKREVDRGQEVAMVVSAMSGETDRLAELCRQVTS----IDNARERDVVISTGEQVSSGL 80 (411)
Q Consensus 5 V~KfGGtSv~~~~~i~~v~~~i~~~~~~g~~~ivVvSA~~g~Td~L~~l~~~~~~----~~~~~~~d~i~s~GE~~s~~l 80 (411)
T Consensus 1 ViK~GGssl~~~~~~~~~~~~i~~l~~~g~~~vvV~sa~~~it~~l~~~~~~~~~~~~~~~t~~~~~~i~~~g~~~~~~~ 80 (248)
T cd02115 1 VIKFGGSSVSSEERLRNLARILVKLASEGGRVVVVHGAGPQITDELLAHGELLGYARGLRITDRETDALAAMGEGMSNLL 80 (248)
T ss_pred CEEECHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99889136069999999999999999789998999698445329999865354331367899899999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCCCCCEEEECCCCCCHHHHHH
Q ss_conf 99999843998635673324551213355200012362100334310680586034333556842443068624289999
Q gi|254780873|r 81 MVLALQSLGIQAISLQGWQIPIMTDSLHGMARICRVDEKKIVTHLKKKQVVVITGFQGLSHDNSVTTLGRGGSDTSAVAI 160 (411)
Q Consensus 81 ~a~~l~~~G~~a~~l~~~~~~i~t~~~~~~a~~~~~~~~~l~~~l~~~~v~v~~Gf~g~~~~g~~ttlgRGGSD~tA~~i 160 (411)
T Consensus 81 l~~~L~~~g~~a~~l~~~~~~~~~~~~~~~~~v~~~~~~~l~~~l~~~~ipVi~g~~~~~-~~~~~~l~~~~sD~~Aa~l 159 (248)
T cd02115 81 IAAALEQHGIKAVPLDLTQAGFASPNQGHVGKITKVSTDRLKSLLENGILPILSGFGGTD-EKETGTLGRGGSDSTAALL 159 (248)
T ss_pred HHHHHHHCCCCEEEEEEEECCEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCC-CCCCCEECCCCCCHHHHHH
T ss_conf 999998569981698655323313664443210226899999877416766813634555-6777633078878999999
Q ss_pred HHHHCHHHHHHHCCHHHHEECCCCCCCCCCEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCC----
Q ss_conf 9884734556534614402458421234411056799999998840311013788764331385267611237777----
Q gi|254780873|r 161 AAAIKADRCDIYTDVCGIYTTDPRIEPKAHLMKKISFEEMLEMSSLGAKVMQVRSVELAMLYKMCLFVRSSFEDHG---- 236 (411)
Q Consensus 161 a~~l~A~~~~i~tdV~Gi~taDPr~v~~a~~i~~lsy~Ea~eLa~~Gakvlhp~~~~~~~~~~ipi~i~ntf~~~~---- 236 (411)
T Consensus 160 A~~l~A~~lii~TDV~Gv~~~dp~~~~~a~~i~~ls~~ea~el~~~G~~v~~~~a~~~a~~~gi~v~I~n~~~~~~lelf 239 (248)
T cd02115 160 AAALKADRLVILTDVDGVYTADPRKVPDAKLLSELTYEEAAELAYAGAMVLKPKAADPAARAGIPVRIANTENPGALALF 239 (248)
T ss_pred HHHHCCCHHHHEECCCCCEECCCCCCCCCEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHC
T ss_conf 99949665531045786161899868867588653899999998559967489999999987997999139997533411
Q ss_pred CCCCCCCCC
Q ss_conf 765435454
Q gi|254780873|r 237 QQEQLGTLI 245 (411)
Q Consensus 237 ~~~~~GT~I 245 (411)
T Consensus 240 ~~~~~GTlI 248 (248)
T cd02115 240 TPDGGGTLI 248 (248)
T ss_pred CCCCCCCCC
T ss_conf 799996819